Query 008582
Match_columns 561
No_of_seqs 231 out of 1782
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 13:58:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008582.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008582hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02222 phosphoinositide phos 100.0 2E-154 5E-159 1253.5 51.1 550 1-561 1-581 (581)
2 PLN02230 phosphoinositide phos 100.0 2E-154 4E-159 1254.9 49.8 554 3-561 7-598 (598)
3 PLN02228 Phosphoinositide phos 100.0 2E-150 4E-155 1219.8 51.1 532 3-561 2-561 (567)
4 KOG0169 Phosphoinositide-speci 100.0 2E-150 4E-155 1218.6 40.2 531 1-561 182-744 (746)
5 PLN02952 phosphoinositide phos 100.0 8E-148 2E-152 1205.4 46.9 549 2-561 15-599 (599)
6 PLN02223 phosphoinositide phos 100.0 5E-140 1E-144 1122.1 44.5 494 10-561 1-537 (537)
7 KOG1265 Phospholipase C [Lipid 100.0 1E-131 3E-136 1066.7 34.1 525 19-560 215-822 (1189)
8 KOG1264 Phospholipase C [Lipid 100.0 2E-114 4E-119 925.5 28.7 511 38-560 236-1188(1267)
9 cd08629 PI-PLCc_delta1 Catalyt 100.0 3E-103 6E-108 772.5 21.1 245 108-418 1-246 (258)
10 cd08633 PI-PLCc_eta2 Catalytic 100.0 2E-102 4E-107 764.4 21.1 240 108-418 1-242 (254)
11 cd08630 PI-PLCc_delta3 Catalyt 100.0 5E-102 1E-106 766.1 20.5 244 108-418 1-246 (258)
12 cd08632 PI-PLCc_eta1 Catalytic 100.0 5E-102 1E-106 759.5 20.1 240 108-419 1-242 (253)
13 cd08624 PI-PLCc_beta2 Catalyti 100.0 9E-102 2E-106 764.3 21.3 243 108-419 1-250 (261)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 9E-102 2E-106 762.8 21.0 243 108-418 1-245 (257)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 2E-101 3E-106 761.5 20.9 243 108-417 1-245 (258)
16 cd08596 PI-PLCc_epsilon Cataly 100.0 2E-101 4E-106 759.4 19.9 237 108-418 1-242 (254)
17 cd08626 PI-PLCc_beta4 Catalyti 100.0 5E-101 1E-105 757.2 20.0 240 108-419 1-246 (257)
18 cd08623 PI-PLCc_beta1 Catalyti 100.0 1E-100 2E-105 755.5 20.0 238 108-417 1-245 (258)
19 cd08591 PI-PLCc_beta Catalytic 100.0 2E-100 4E-105 753.5 20.5 238 108-417 1-244 (257)
20 cd08593 PI-PLCc_delta Catalyti 100.0 3E-100 7E-105 755.1 20.6 243 108-417 1-244 (257)
21 cd08625 PI-PLCc_beta3 Catalyti 100.0 4E-100 8E-105 756.1 20.9 239 109-419 2-247 (258)
22 cd08628 PI-PLCc_gamma2 Catalyt 100.0 1.1E-99 2E-104 747.8 18.9 242 108-419 1-243 (254)
23 cd08594 PI-PLCc_eta Catalytic 100.0 2.1E-99 5E-104 732.5 19.5 213 108-418 1-215 (227)
24 cd08597 PI-PLCc_PRIP_metazoa C 100.0 3.3E-97 7E-102 734.7 20.2 246 108-417 1-247 (260)
25 cd08627 PI-PLCc_gamma1 Catalyt 100.0 5.9E-97 1E-101 715.2 20.0 215 109-419 2-218 (229)
26 cd08558 PI-PLCc_eukaryota Cata 100.0 1.1E-96 2E-101 716.3 20.0 213 108-418 1-214 (226)
27 cd08598 PI-PLC1c_yeast Catalyt 100.0 2.4E-96 5E-101 716.0 20.1 217 108-417 1-218 (231)
28 cd08592 PI-PLCc_gamma Catalyti 100.0 8E-95 1.7E-99 703.4 19.8 216 108-419 1-218 (229)
29 cd08599 PI-PLCc_plant Catalyti 100.0 9.1E-94 2E-98 697.6 19.9 213 108-417 1-215 (228)
30 cd00137 PI-PLCc Catalytic doma 100.0 5.2E-58 1.1E-62 466.0 18.1 238 108-417 1-261 (274)
31 smart00148 PLCXc Phospholipase 100.0 1.4E-40 3.1E-45 303.8 13.1 134 109-243 1-135 (135)
32 PF00388 PI-PLC-X: Phosphatidy 100.0 3E-37 6.6E-42 286.0 12.5 143 111-254 1-146 (146)
33 smart00149 PLCYc Phospholipase 100.0 2.7E-34 5.8E-39 252.3 7.0 99 327-426 1-114 (115)
34 PF00387 PI-PLC-Y: Phosphatidy 100.0 2.6E-34 5.7E-39 254.3 2.3 101 325-426 1-116 (118)
35 cd08589 PI-PLCc_SaPLC1_like Ca 99.9 1.1E-21 2.4E-26 200.9 12.5 146 109-254 3-209 (324)
36 cd00275 C2_PLC_like C2 domain 99.8 5.1E-19 1.1E-23 159.2 15.5 125 432-561 2-128 (128)
37 cd08590 PI-PLCc_Rv2075c_like C 99.8 1.6E-18 3.5E-23 175.6 12.3 143 108-252 3-168 (267)
38 cd08395 C2C_Munc13 C2 domain t 99.7 4.8E-17 1E-21 145.7 12.4 103 433-542 1-111 (120)
39 cd08677 C2A_Synaptotagmin-13 C 99.7 1.4E-16 2.9E-21 141.7 11.5 101 429-539 11-115 (118)
40 cd08692 C2B_Tac2-N C2 domain s 99.7 2.3E-16 5.1E-21 143.4 10.6 114 429-548 11-128 (135)
41 cd08406 C2B_Synaptotagmin-12 C 99.7 1.7E-16 3.7E-21 145.4 9.6 115 429-549 12-129 (136)
42 cd04036 C2_cPLA2 C2 domain pre 99.7 9.4E-16 2E-20 136.9 13.3 113 434-560 2-117 (119)
43 cd08682 C2_Rab11-FIP_classI C2 99.7 1E-15 2.2E-20 138.1 12.8 115 434-559 1-126 (126)
44 cd04042 C2A_MCTP_PRT C2 domain 99.6 3E-15 6.6E-20 134.0 14.6 116 433-560 1-119 (121)
45 cd04016 C2_Tollip C2 domain pr 99.6 3.4E-15 7.3E-20 134.1 14.3 115 432-560 2-121 (121)
46 cd08557 PI-PLCc_bacteria_like 99.6 4.7E-16 1E-20 157.9 9.9 144 110-254 4-158 (271)
47 cd08407 C2B_Synaptotagmin-13 C 99.6 8.9E-16 1.9E-20 140.9 9.3 117 429-549 12-131 (138)
48 cd08381 C2B_PI3K_class_II C2 d 99.6 2.7E-15 5.9E-20 134.9 12.0 97 432-535 13-112 (122)
49 cd04015 C2_plant_PLD C2 domain 99.6 8.9E-15 1.9E-19 137.5 14.7 125 431-561 6-158 (158)
50 cd04019 C2C_MCTP_PRT_plant C2 99.6 8.1E-15 1.8E-19 136.6 14.0 117 433-560 1-131 (150)
51 cd08379 C2D_MCTP_PRT_plant C2 99.6 8E-15 1.7E-19 132.5 13.4 114 433-555 1-124 (126)
52 cd08377 C2C_MCTP_PRT C2 domain 99.6 1.4E-14 3.1E-19 128.7 14.9 118 432-561 1-119 (119)
53 cd04029 C2A_SLP-4_5 C2 domain 99.6 5.7E-15 1.2E-19 133.4 12.1 108 430-542 13-125 (125)
54 cd04022 C2A_MCTP_PRT_plant C2 99.6 9.8E-15 2.1E-19 131.8 13.1 118 433-561 1-126 (127)
55 cd04028 C2B_RIM1alpha C2 domai 99.6 2.6E-14 5.7E-19 132.3 14.7 107 432-544 29-139 (146)
56 cd08392 C2A_SLP-3 C2 domain fi 99.6 1.7E-14 3.7E-19 130.9 13.1 99 430-534 13-114 (128)
57 cd08393 C2A_SLP-1_2 C2 domain 99.6 1.3E-14 2.8E-19 131.0 12.2 99 431-535 14-115 (125)
58 cd08404 C2B_Synaptotagmin-4 C2 99.6 7.2E-15 1.6E-19 134.4 9.9 113 431-549 14-129 (136)
59 cd04010 C2B_RasA3 C2 domain se 99.6 1.9E-14 4.1E-19 133.7 12.2 108 433-548 1-127 (148)
60 cd08378 C2B_MCTP_PRT_plant C2 99.6 3.1E-14 6.8E-19 127.8 13.1 110 434-560 2-119 (121)
61 cd04039 C2_PSD C2 domain prese 99.6 1.8E-14 4E-19 126.8 11.0 98 432-536 1-99 (108)
62 cd04033 C2_NEDD4_NEDD4L C2 dom 99.6 4E-14 8.7E-19 128.6 13.5 122 433-561 1-133 (133)
63 cd08402 C2B_Synaptotagmin-1 C2 99.6 1.1E-14 2.3E-19 133.2 9.6 115 429-549 12-129 (136)
64 cd08410 C2B_Synaptotagmin-17 C 99.6 1.2E-14 2.7E-19 132.8 9.8 125 405-549 1-129 (135)
65 cd08400 C2_Ras_p21A1 C2 domain 99.6 7.8E-14 1.7E-18 126.1 14.7 116 432-561 4-123 (126)
66 cd08403 C2B_Synaptotagmin-3-5- 99.6 1.4E-14 3E-19 132.1 9.7 114 430-549 12-128 (134)
67 cd08385 C2A_Synaptotagmin-1-5- 99.6 4.5E-14 9.8E-19 126.8 12.9 99 430-536 14-114 (124)
68 cd04041 C2A_fungal C2 domain f 99.5 2.1E-14 4.5E-19 126.8 9.8 103 432-542 1-107 (111)
69 cd08376 C2B_MCTP_PRT C2 domain 99.5 9.4E-14 2E-18 123.1 13.9 110 434-560 2-114 (116)
70 cd08384 C2B_Rabphilin_Doc2 C2 99.5 2.2E-14 4.7E-19 130.5 9.8 114 430-549 11-127 (133)
71 cd08681 C2_fungal_Inn1p-like C 99.5 4.5E-14 9.8E-19 125.6 11.4 114 432-560 1-118 (118)
72 cd08375 C2_Intersectin C2 doma 99.5 1.1E-13 2.4E-18 126.8 13.6 113 432-560 15-135 (136)
73 cd08678 C2_C21orf25-like C2 do 99.5 9.7E-14 2.1E-18 125.3 12.9 116 434-561 1-120 (126)
74 cd04031 C2A_RIM1alpha C2 domai 99.5 1.2E-13 2.7E-18 123.8 13.6 96 430-531 14-112 (125)
75 cd08387 C2A_Synaptotagmin-8 C2 99.5 1.2E-13 2.7E-18 124.0 13.1 99 430-536 14-114 (124)
76 cd08405 C2B_Synaptotagmin-7 C2 99.5 3.2E-14 7E-19 130.0 9.4 114 430-549 13-129 (136)
77 cd08373 C2A_Ferlin C2 domain f 99.5 1.8E-13 3.9E-18 123.5 13.5 110 438-561 2-116 (127)
78 cd08680 C2_Kibra C2 domain fou 99.5 9.5E-14 2.1E-18 125.2 11.1 99 429-533 11-112 (124)
79 cd04050 C2B_Synaptotagmin-like 99.5 1.2E-13 2.7E-18 120.5 11.5 96 434-543 2-102 (105)
80 cd08388 C2A_Synaptotagmin-4-11 99.5 1.7E-13 3.7E-18 124.2 12.7 97 431-535 15-115 (128)
81 cd08521 C2A_SLP C2 domain firs 99.5 2.6E-13 5.7E-18 121.3 13.2 100 430-535 12-114 (123)
82 cd08688 C2_KIAA0528-like C2 do 99.5 1.1E-13 2.3E-18 122.0 10.5 99 434-543 1-109 (110)
83 cd04025 C2B_RasA1_RasA4 C2 dom 99.5 2.1E-13 4.5E-18 122.4 12.5 100 433-543 1-103 (123)
84 cd04040 C2D_Tricalbin-like C2 99.5 2.1E-13 4.5E-18 120.7 12.2 111 434-556 1-114 (115)
85 cd04018 C2C_Ferlin C2 domain t 99.5 1.6E-13 3.4E-18 127.9 11.3 107 433-544 1-126 (151)
86 cd04030 C2C_KIAA1228 C2 domain 99.5 2.7E-13 5.9E-18 122.0 12.4 100 430-535 14-117 (127)
87 cd08409 C2B_Synaptotagmin-15 C 99.5 2.1E-13 4.6E-18 125.1 11.5 103 430-539 13-119 (137)
88 cd08685 C2_RGS-like C2 domain 99.5 1.5E-13 3.3E-18 123.0 10.2 97 432-535 12-110 (119)
89 cd08391 C2A_C2C_Synaptotagmin_ 99.5 6.2E-13 1.3E-17 118.4 14.1 118 432-560 1-121 (121)
90 cd04009 C2B_Munc13-like C2 dom 99.5 3.3E-13 7.1E-18 123.0 12.6 97 431-533 15-117 (133)
91 cd08382 C2_Smurf-like C2 domai 99.5 3.6E-13 7.7E-18 121.1 12.6 114 433-558 1-122 (123)
92 cd04024 C2A_Synaptotagmin-like 99.5 5.4E-13 1.2E-17 120.0 13.8 120 432-560 1-128 (128)
93 cd04011 C2B_Ferlin C2 domain s 99.5 2.4E-13 5.2E-18 119.9 10.9 99 431-544 3-111 (111)
94 cd04032 C2_Perforin C2 domain 99.5 2.7E-13 5.8E-18 122.7 11.5 93 431-535 27-120 (127)
95 cd04043 C2_Munc13_fungal C2 do 99.5 9E-13 1.9E-17 118.6 14.3 113 433-560 2-120 (126)
96 cd08408 C2B_Synaptotagmin-14_1 99.5 3E-13 6.4E-18 124.3 11.3 114 430-549 13-131 (138)
97 cd08386 C2A_Synaptotagmin-7 C2 99.5 6.7E-13 1.5E-17 119.2 13.2 99 430-536 14-115 (125)
98 KOG1030 Predicted Ca2+-depende 99.5 1.2E-13 2.7E-18 127.9 8.5 92 432-535 6-97 (168)
99 cd08389 C2A_Synaptotagmin-14_1 99.5 7E-13 1.5E-17 119.5 12.6 97 430-535 14-113 (124)
100 cd08401 C2A_RasA2_RasA3 C2 dom 99.5 1E-12 2.2E-17 118.0 13.5 115 434-560 2-121 (121)
101 PF09279 EF-hand_like: Phospho 99.5 6.2E-14 1.3E-18 117.4 5.2 76 26-103 1-77 (83)
102 cd04051 C2_SRC2_like C2 domain 99.5 3.4E-13 7.3E-18 121.2 10.1 108 433-550 1-121 (125)
103 cd04027 C2B_Munc13 C2 domain s 99.4 1.3E-12 2.8E-17 118.2 13.6 114 433-558 2-127 (127)
104 cd04044 C2A_Tricalbin-like C2 99.4 1.1E-12 2.3E-17 117.4 12.8 119 432-561 2-123 (124)
105 cd00276 C2B_Synaptotagmin C2 d 99.4 2.2E-13 4.8E-18 123.4 8.4 114 430-549 12-128 (134)
106 cd04017 C2D_Ferlin C2 domain f 99.4 1.4E-12 3.1E-17 119.2 13.5 115 433-561 2-132 (135)
107 cd04014 C2_PKC_epsilon C2 doma 99.4 1.8E-12 3.8E-17 117.9 13.8 116 432-560 4-128 (132)
108 cd04054 C2A_Rasal1_RasA4 C2 do 99.4 1.6E-12 3.4E-17 116.6 13.3 114 434-558 2-119 (121)
109 cd04020 C2B_SLP_1-2-3-4 C2 dom 99.4 9.5E-13 2.1E-17 124.2 12.1 98 430-533 25-125 (162)
110 cd08390 C2A_Synaptotagmin-15-1 99.4 1E-12 2.2E-17 117.6 11.6 104 430-541 12-121 (123)
111 cd04026 C2_PKC_alpha_gamma C2 99.4 1.7E-12 3.7E-17 117.7 13.1 108 432-545 13-123 (131)
112 cd08690 C2_Freud-1 C2 domain f 99.4 4.8E-12 1E-16 118.2 15.4 121 434-560 4-136 (155)
113 cd04046 C2_Calpain C2 domain p 99.4 6.6E-12 1.4E-16 113.4 15.7 114 432-560 3-121 (126)
114 cd04035 C2A_Rabphilin_Doc2 C2 99.4 1.7E-12 3.6E-17 116.4 11.2 100 430-536 13-115 (123)
115 cd04048 C2A_Copine C2 domain f 99.4 1.6E-12 3.5E-17 116.2 10.8 103 438-546 6-117 (120)
116 cd04037 C2E_Ferlin C2 domain f 99.4 2.3E-12 5.1E-17 116.1 10.5 91 434-533 2-92 (124)
117 cd04038 C2_ArfGAP C2 domain pr 99.4 3.1E-12 6.7E-17 118.5 10.7 92 432-536 2-93 (145)
118 cd08686 C2_ABR C2 domain in th 99.4 3.4E-12 7.4E-17 113.4 10.2 93 434-539 1-103 (118)
119 cd08691 C2_NEDL1-like C2 domai 99.3 1.6E-11 3.5E-16 112.7 13.7 94 433-535 2-107 (137)
120 PLN03008 Phospholipase D delta 99.3 4.2E-12 9.1E-17 142.9 11.6 99 457-561 75-177 (868)
121 cd08675 C2B_RasGAP C2 domain s 99.3 9.9E-12 2.1E-16 114.1 11.9 104 434-545 1-122 (137)
122 cd04049 C2_putative_Elicitor-r 99.3 8.3E-12 1.8E-16 112.1 10.8 92 432-534 1-96 (124)
123 cd08394 C2A_Munc13 C2 domain f 99.3 1E-11 2.2E-16 111.7 11.1 94 432-542 2-100 (127)
124 cd04045 C2C_Tricalbin-like C2 99.3 1.2E-11 2.5E-16 111.0 11.5 93 432-535 1-93 (120)
125 cd04013 C2_SynGAP_like C2 doma 99.3 2E-11 4.4E-16 112.9 13.0 115 431-561 10-139 (146)
126 cd08383 C2A_RasGAP C2 domain ( 99.3 5.7E-11 1.2E-15 105.2 13.4 113 434-560 2-117 (117)
127 cd04021 C2_E3_ubiquitin_ligase 99.3 4.8E-11 1E-15 107.7 12.3 114 432-558 2-124 (125)
128 KOG0696 Serine/threonine prote 99.3 3.7E-12 8.1E-17 131.9 5.6 96 432-533 180-276 (683)
129 PF00168 C2: C2 domain; Inter 99.3 2.4E-11 5.1E-16 100.2 9.0 85 434-526 1-85 (85)
130 cd08676 C2A_Munc13-like C2 dom 99.3 3.8E-11 8.2E-16 112.1 11.3 94 430-533 26-143 (153)
131 cd04052 C2B_Tricalbin-like C2 99.3 3.8E-11 8.2E-16 106.0 10.7 98 454-561 8-109 (111)
132 cd08555 PI-PLCc_GDPD_SF Cataly 99.2 5.4E-11 1.2E-15 114.0 10.9 98 122-224 2-109 (179)
133 cd04047 C2B_Copine C2 domain s 99.2 1E-10 2.3E-15 102.6 10.5 93 437-536 5-102 (110)
134 KOG1028 Ca2+-dependent phospho 99.1 2.6E-10 5.6E-15 123.1 12.7 121 432-560 167-293 (421)
135 smart00239 C2 Protein kinase C 99.1 4.4E-10 9.4E-15 94.6 10.6 99 434-540 2-100 (101)
136 KOG1028 Ca2+-dependent phospho 99.1 3.7E-10 8.1E-15 121.9 9.2 116 428-549 294-412 (421)
137 PLN03200 cellulose synthase-in 99.0 1.1E-09 2.4E-14 134.0 11.8 114 431-560 1979-2099(2102)
138 cd08374 C2F_Ferlin C2 domain s 99.0 2.9E-09 6.4E-14 96.9 9.9 99 434-536 2-125 (133)
139 PLN02270 phospholipase D alpha 99.0 4E-09 8.6E-14 119.2 13.0 125 431-561 7-148 (808)
140 KOG1011 Neurotransmitter relea 98.9 1.9E-09 4.2E-14 116.0 7.9 92 432-535 295-397 (1283)
141 cd00030 C2 C2 domain. The C2 d 98.9 1.6E-08 3.4E-13 84.4 10.4 90 434-533 1-90 (102)
142 cd08586 PI-PLCc_BcPLC_like Cat 98.9 7E-09 1.5E-13 106.3 9.2 137 112-253 7-148 (279)
143 cd08588 PI-PLCc_At5g67130_like 98.8 1.2E-08 2.6E-13 104.0 9.7 138 110-250 7-152 (270)
144 COG5038 Ca2+-dependent lipid-b 98.7 4.3E-08 9.4E-13 112.7 10.5 105 431-545 1039-1146(1227)
145 PLN02352 phospholipase D epsil 98.5 8.6E-07 1.9E-11 100.3 12.2 118 431-561 9-130 (758)
146 KOG1328 Synaptic vesicle prote 98.2 6.1E-07 1.3E-11 98.5 2.4 96 431-532 946-1047(1103)
147 COG5038 Ca2+-dependent lipid-b 98.0 1.1E-05 2.5E-10 93.3 8.3 93 432-533 436-528 (1227)
148 cd08689 C2_fungal_Pkc1p C2 dom 98.0 1.2E-05 2.6E-10 69.8 6.1 89 434-535 1-89 (109)
149 KOG1011 Neurotransmitter relea 97.9 3.3E-05 7.2E-10 84.1 9.3 104 431-541 1124-1235(1283)
150 KOG2059 Ras GTPase-activating 97.9 3.8E-05 8.2E-10 84.9 9.4 109 431-551 4-117 (800)
151 KOG1031 Predicted Ca2+-depende 97.8 7.4E-05 1.6E-09 80.6 9.2 120 432-561 3-138 (1169)
152 cd08622 PI-PLCXDc_CG14945_like 97.6 0.00041 8.8E-09 71.2 11.5 135 112-251 6-158 (276)
153 cd08587 PI-PLCXDc_like Catalyt 97.5 0.00079 1.7E-08 69.5 11.8 136 112-251 6-170 (288)
154 KOG0905 Phosphoinositide 3-kin 97.5 8.4E-05 1.8E-09 85.9 4.6 96 432-533 1524-1622(1639)
155 KOG1326 Membrane-associated pr 97.4 0.00016 3.5E-09 82.6 5.6 124 378-531 580-703 (1105)
156 KOG2059 Ras GTPase-activating 97.4 0.00036 7.9E-09 77.4 7.7 76 457-533 149-240 (800)
157 KOG1013 Synaptic vesicle prote 97.4 0.00033 7E-09 71.7 6.2 105 432-548 233-339 (362)
158 cd08398 C2_PI3K_class_I_alpha 97.2 0.0065 1.4E-07 57.2 12.8 103 430-542 6-120 (158)
159 cd08693 C2_PI3K_class_I_beta_d 97.1 0.0082 1.8E-07 57.4 12.7 105 430-542 6-134 (173)
160 cd08380 C2_PI3K_like C2 domain 97.1 0.0077 1.7E-07 56.3 12.2 104 432-542 8-121 (156)
161 cd08616 PI-PLCXD1c Catalytic d 97.1 0.006 1.3E-07 63.1 12.5 137 112-253 7-175 (290)
162 cd04012 C2A_PI3K_class_II C2 d 96.9 0.0082 1.8E-07 57.2 10.8 117 430-552 6-144 (171)
163 cd08683 C2_C2cd3 C2 domain fou 96.9 0.0026 5.6E-08 57.3 6.3 98 434-532 1-130 (143)
164 cd08577 PI-PLCc_GDPD_SF_unchar 96.7 0.0047 1E-07 61.7 7.9 97 122-229 4-109 (228)
165 KOG1013 Synaptic vesicle prote 96.6 0.00046 1E-08 70.7 -0.2 100 431-536 92-194 (362)
166 cd08556 GDPD Glycerophosphodie 96.5 0.011 2.4E-07 56.1 8.8 64 132-209 9-72 (189)
167 cd08397 C2_PI3K_class_III C2 d 96.5 0.011 2.4E-07 55.7 8.2 85 458-542 29-121 (159)
168 cd08562 GDPD_EcUgpQ_like Glyce 96.5 0.0085 1.8E-07 59.2 7.8 40 134-174 11-50 (229)
169 PLN02964 phosphatidylserine de 96.5 0.0053 1.1E-07 69.6 6.9 87 429-532 51-137 (644)
170 cd08684 C2A_Tac2-N C2 domain f 96.4 0.006 1.3E-07 51.3 5.3 90 436-534 3-94 (103)
171 cd08582 GDPD_like_2 Glyceropho 96.4 0.016 3.6E-07 57.6 9.3 40 134-174 11-50 (233)
172 cd08399 C2_PI3K_class_I_gamma 96.2 0.036 7.7E-07 53.2 10.2 104 431-541 9-135 (178)
173 PF03009 GDPD: Glycerophosphor 96.2 0.0072 1.6E-07 59.8 5.3 40 134-174 8-47 (256)
174 cd08579 GDPD_memb_like Glycero 96.1 0.015 3.2E-07 57.4 7.2 40 134-174 11-50 (220)
175 cd08619 PI-PLCXDc_plant Cataly 95.9 0.043 9.2E-07 56.2 9.3 137 109-254 23-166 (285)
176 cd08563 GDPD_TtGDE_like Glycer 95.8 0.026 5.7E-07 56.0 7.6 40 134-174 13-52 (230)
177 cd08620 PI-PLCXDc_like_1 Catal 95.7 0.095 2.1E-06 53.9 11.1 139 112-253 6-162 (281)
178 cd08567 GDPD_SpGDE_like Glycer 95.5 0.051 1.1E-06 54.9 8.4 40 135-175 14-53 (263)
179 PF00792 PI3K_C2: Phosphoinosi 95.5 0.04 8.7E-07 50.7 7.0 82 461-542 4-99 (142)
180 cd08565 GDPD_pAtGDE_like Glyce 95.1 0.11 2.4E-06 52.0 9.3 39 135-174 12-50 (235)
181 cd08566 GDPD_AtGDE_like Glycer 95.0 0.09 1.9E-06 52.8 8.3 38 136-174 15-52 (240)
182 cd05029 S-100A6 S-100A6: S-100 94.9 0.11 2.3E-06 44.0 7.1 62 26-94 11-78 (88)
183 KOG1328 Synaptic vesicle prote 94.8 0.018 4E-07 64.4 2.7 58 477-534 179-272 (1103)
184 cd08564 GDPD_GsGDE_like Glycer 94.6 0.12 2.7E-06 52.5 8.3 39 134-173 18-56 (265)
185 cd08568 GDPD_TmGDE_like Glycer 94.5 0.16 3.4E-06 50.4 8.6 78 133-220 11-113 (226)
186 KOG2060 Rab3 effector RIM1 and 94.2 0.029 6.4E-07 58.7 2.5 127 390-533 237-365 (405)
187 cd08584 PI-PLCc_GDPD_SF_unchar 94.0 0.23 5E-06 48.2 8.1 47 138-188 8-54 (192)
188 cd08575 GDPD_GDE4_like Glycero 93.7 0.072 1.6E-06 54.3 4.3 40 135-175 14-53 (264)
189 cd08561 GDPD_cytoplasmic_ScUgp 93.5 0.08 1.7E-06 53.2 4.2 41 134-175 11-51 (249)
190 KOG3837 Uncharacterized conser 93.4 0.095 2.1E-06 55.5 4.7 120 433-560 368-502 (523)
191 cd08574 GDPD_GDE_2_3_6 Glycero 92.8 0.12 2.5E-06 52.4 4.2 40 135-175 15-54 (252)
192 cd08601 GDPD_SaGlpQ_like Glyce 92.4 0.15 3.3E-06 51.4 4.4 39 135-174 14-52 (256)
193 cd08580 GDPD_Rv2277c_like Glyc 91.8 0.23 5E-06 50.7 5.0 42 133-175 12-53 (263)
194 KOG1327 Copine [Signal transdu 91.8 0.34 7.3E-06 53.5 6.5 83 477-559 43-130 (529)
195 PRK11143 glpQ glycerophosphodi 91.8 0.22 4.8E-06 53.1 5.0 42 133-175 38-79 (355)
196 cd08581 GDPD_like_1 Glyceropho 91.8 0.19 4.1E-06 50.1 4.2 40 135-175 12-51 (229)
197 cd08612 GDPD_GDE4 Glycerophosp 91.8 0.21 4.5E-06 51.9 4.6 39 135-174 40-78 (300)
198 cd08600 GDPD_EcGlpQ_like Glyce 91.7 0.21 4.5E-06 52.4 4.6 42 133-175 12-53 (318)
199 cd08607 GDPD_GDE5 Glycerophosp 91.5 0.23 5.1E-06 51.1 4.7 48 127-175 12-59 (290)
200 KOG1327 Copine [Signal transdu 91.5 0.49 1.1E-05 52.3 7.3 80 454-534 152-236 (529)
201 cd08573 GDPD_GDE1 Glycerophosp 91.5 0.21 4.6E-06 50.7 4.3 40 134-174 11-50 (258)
202 cd08571 GDPD_SHV3_plant Glycer 91.0 0.23 5.1E-06 51.7 4.0 40 135-175 14-53 (302)
203 cd08605 GDPD_GDE5_like_1_plant 90.9 0.25 5.5E-06 50.6 4.2 38 136-174 25-62 (282)
204 cd08559 GDPD_periplasmic_GlpQ_ 90.8 0.25 5.3E-06 51.3 4.0 41 134-175 13-53 (296)
205 cd08609 GDPD_GDE3 Glycerophosp 90.6 0.29 6.2E-06 51.3 4.3 49 123-175 31-79 (315)
206 cd08606 GDPD_YPL110cp_fungi Gl 90.3 0.28 6E-06 50.4 3.9 39 136-175 24-62 (286)
207 cd08570 GDPD_YPL206cp_fungi Gl 89.8 0.47 1E-05 47.3 4.9 41 134-175 11-51 (234)
208 cd05030 calgranulins Calgranul 89.8 0.95 2.1E-05 38.1 6.1 62 26-94 9-78 (88)
209 cd08602 GDPD_ScGlpQ1_like Glyc 89.8 0.35 7.6E-06 50.5 4.1 42 133-175 12-53 (309)
210 cd08694 C2_Dock-A C2 domains f 89.7 2.6 5.5E-05 41.1 9.6 68 475-542 53-131 (196)
211 PRK09454 ugpQ cytoplasmic glyc 89.7 0.32 7E-06 49.0 3.7 41 134-175 20-60 (249)
212 cd05024 S-100A10 S-100A10: A s 89.6 1.5 3.3E-05 37.4 7.1 63 26-94 9-75 (91)
213 PTZ00268 glycosylphosphatidyli 89.6 3.4 7.5E-05 44.2 11.3 107 142-255 90-207 (380)
214 cd05026 S-100Z S-100Z: S-100Z 89.5 1.6 3.4E-05 37.2 7.3 63 26-94 11-80 (93)
215 cd08695 C2_Dock-B C2 domains f 89.4 1.3 2.8E-05 42.9 7.4 68 475-542 53-129 (189)
216 smart00142 PI3K_C2 Phosphoinos 89.3 2.3 4.9E-05 36.7 8.2 76 433-514 12-91 (100)
217 cd05023 S-100A11 S-100A11: S-1 89.2 1.2 2.6E-05 37.7 6.3 63 26-94 10-79 (89)
218 cd05022 S-100A13 S-100A13: S-1 88.8 1.4 3.1E-05 37.3 6.4 62 26-94 9-74 (89)
219 cd08583 PI-PLCc_GDPD_SF_unchar 88.6 0.54 1.2E-05 46.9 4.4 39 135-174 14-52 (237)
220 PF13833 EF-hand_8: EF-hand do 88.3 0.92 2E-05 34.0 4.5 50 38-94 3-52 (54)
221 cd08679 C2_DOCK180_related C2 88.1 1.8 4E-05 41.3 7.5 67 478-544 55-133 (178)
222 cd08604 GDPD_SHV3_repeat_2 Gly 88.0 0.59 1.3E-05 48.6 4.4 42 133-175 12-53 (300)
223 PF15627 CEP76-C2: CEP76 C2 do 87.9 8.5 0.00019 36.1 11.5 125 429-560 6-149 (156)
224 PF10358 NT-C2: N-terminal C2 87.8 13 0.00028 33.7 12.7 114 432-560 7-134 (143)
225 PF14429 DOCK-C2: C2 domain in 87.6 1.8 3.9E-05 41.5 7.2 67 476-542 60-135 (184)
226 cd08572 GDPD_GDE5_like Glycero 87.5 0.67 1.4E-05 48.0 4.4 42 133-175 19-60 (293)
227 cd08610 GDPD_GDE6 Glycerophosp 86.6 0.79 1.7E-05 48.1 4.4 42 133-175 34-75 (316)
228 KOG1326 Membrane-associated pr 86.0 0.51 1.1E-05 55.1 2.7 84 455-543 223-317 (1105)
229 cd05025 S-100A1 S-100A1: S-100 85.2 2.9 6.2E-05 35.2 6.4 64 25-94 9-79 (92)
230 cd00051 EFh EF-hand, calcium b 83.2 5.1 0.00011 29.3 6.4 59 27-93 2-62 (63)
231 cd08585 GDPD_like_3 Glyceropho 82.7 1.2 2.6E-05 44.6 3.6 39 135-175 20-58 (237)
232 COG0584 UgpQ Glycerophosphoryl 82.7 1.4 3.1E-05 44.2 4.1 36 136-172 20-55 (257)
233 cd08613 GDPD_GDE4_like_1 Glyce 82.7 1.3 2.9E-05 46.2 3.9 39 136-175 60-98 (309)
234 cd08578 GDPD_NUC-2_fungi Putat 82.2 1.8 4E-05 45.0 4.7 38 137-175 16-53 (300)
235 smart00027 EH Eps15 homology d 82.1 5.7 0.00012 33.7 7.0 61 24-94 9-71 (96)
236 cd08560 GDPD_EcGlpQ_like_1 Gly 81.9 1.6 3.4E-05 46.7 4.2 38 134-172 29-66 (356)
237 cd08608 GDPD_GDE2 Glycerophosp 81.3 1.7 3.8E-05 46.2 4.2 41 134-175 14-54 (351)
238 cd05027 S-100B S-100B: S-100B 80.1 7.5 0.00016 32.7 6.9 63 26-94 9-78 (88)
239 PF01023 S_100: S-100/ICaBP ty 80.1 2.2 4.7E-05 31.3 3.1 27 26-52 7-37 (44)
240 PTZ00183 centrin; Provisional 79.8 7.9 0.00017 35.1 7.7 65 23-95 88-154 (158)
241 PF13499 EF-hand_7: EF-hand do 79.3 5.4 0.00012 30.9 5.5 63 27-93 2-66 (66)
242 KOG2258 Glycerophosphoryl dies 79.0 2.1 4.6E-05 45.4 4.0 40 135-175 82-121 (341)
243 PTZ00184 calmodulin; Provision 78.7 6.8 0.00015 35.0 6.8 65 23-95 82-148 (149)
244 PF05386 TEP1_N: TEP1 N-termin 78.0 0.5 1.1E-05 31.2 -0.6 14 194-207 8-21 (30)
245 PF09069 EF-hand_3: EF-hand; 76.4 4.7 0.0001 34.3 4.6 62 27-96 5-76 (90)
246 cd00052 EH Eps15 homology doma 75.4 12 0.00026 28.7 6.5 57 28-94 2-60 (67)
247 cd08696 C2_Dock-C C2 domains f 74.5 16 0.00035 35.1 8.3 68 475-542 54-132 (179)
248 cd00213 S-100 S-100: S-100 dom 74.0 14 0.0003 30.5 6.9 65 24-94 7-78 (88)
249 cd08697 C2_Dock-D C2 domains f 72.9 11 0.00024 36.4 6.8 68 475-542 56-138 (185)
250 KOG0904 Phosphatidylinositol 3 72.3 18 0.00039 42.4 9.1 103 431-542 342-470 (1076)
251 cd05031 S-100A10_like S-100A10 71.7 15 0.00032 31.0 6.7 64 25-94 8-78 (94)
252 cd08603 GDPD_SHV3_repeat_1 Gly 71.0 4.7 0.0001 42.0 4.0 40 135-175 14-55 (299)
253 PF05517 p25-alpha: p25-alpha 70.9 7.8 0.00017 36.3 5.1 62 27-94 1-68 (154)
254 cd08621 PI-PLCXDc_like_2 Catal 68.2 14 0.0003 38.5 6.9 92 112-204 6-113 (300)
255 PF12416 DUF3668: Cep120 prote 61.3 83 0.0018 33.4 11.0 99 434-546 2-116 (340)
256 KOG4306 Glycosylphosphatidylin 59.0 39 0.00084 35.2 7.8 83 143-230 73-162 (306)
257 KOG1329 Phospholipase D1 [Lipi 58.5 12 0.00027 43.8 4.6 97 459-560 138-239 (887)
258 PF00036 EF-hand_1: EF hand; 53.7 15 0.00033 24.2 2.6 26 26-51 1-28 (29)
259 PTZ00183 centrin; Provisional 53.7 48 0.001 29.9 7.0 62 25-94 17-80 (158)
260 PRK07259 dihydroorotate dehydr 53.5 37 0.00081 35.0 6.9 79 130-221 95-180 (301)
261 PF13405 EF-hand_6: EF-hand do 50.9 16 0.00035 24.1 2.4 26 26-51 1-28 (31)
262 PTZ00184 calmodulin; Provision 49.2 66 0.0014 28.4 7.1 63 25-95 11-75 (149)
263 cd02810 DHOD_DHPD_FMN Dihydroo 44.8 89 0.0019 31.8 8.1 90 129-229 101-195 (289)
264 KOG0027 Calmodulin and related 44.5 75 0.0016 29.1 6.8 64 24-95 84-149 (151)
265 PF11422 IBP39: Initiator bind 44.4 33 0.00071 32.8 4.3 99 24-127 18-138 (181)
266 PF15625 CC2D2AN-C2: CC2D2A N- 42.9 69 0.0015 30.3 6.3 67 460-533 38-107 (168)
267 COG5126 FRQ1 Ca2+-binding prot 42.4 87 0.0019 29.6 6.8 60 26-94 21-82 (160)
268 smart00054 EFh EF-hand, calciu 41.8 34 0.00073 20.3 2.9 26 26-51 1-28 (29)
269 KOG0906 Phosphatidylinositol 3 39.9 28 0.00061 39.6 3.5 85 458-542 46-138 (843)
270 KOG0027 Calmodulin and related 39.9 99 0.0021 28.3 6.8 65 25-97 8-74 (151)
271 COG5126 FRQ1 Ca2+-binding prot 39.7 78 0.0017 29.9 6.0 65 22-94 89-155 (160)
272 PRK09071 hypothetical protein; 39.3 22 0.00047 37.5 2.5 56 133-188 52-132 (323)
273 PF14788 EF-hand_10: EF hand; 35.0 71 0.0015 24.3 4.0 46 40-93 2-47 (51)
274 PTZ00466 actin-like protein; P 34.2 49 0.0011 35.5 4.3 45 181-225 86-135 (380)
275 PTZ00452 actin; Provisional 34.1 49 0.0011 35.5 4.3 50 180-229 78-134 (375)
276 PF08726 EFhand_Ca_insen: Ca2+ 33.7 27 0.00058 28.3 1.6 33 21-53 2-35 (69)
277 PLN02591 tryptophan synthase 33.4 32 0.00069 34.9 2.6 86 142-230 21-113 (250)
278 KOG1761 Signal recognition par 31.8 62 0.0014 28.7 3.7 45 140-202 14-60 (116)
279 PTZ00281 actin; Provisional 31.2 55 0.0012 35.0 4.1 46 181-226 80-131 (376)
280 PF00977 His_biosynth: Histidi 29.8 85 0.0018 31.1 4.9 39 150-192 123-161 (229)
281 cd00252 SPARC_EC SPARC_EC; ext 29.3 2.1E+02 0.0045 25.4 6.8 59 24-94 47-107 (116)
282 KOG1452 Predicted Rho GTPase-a 29.1 2.1E+02 0.0045 30.1 7.4 77 430-516 49-125 (442)
283 PF00022 Actin: Actin; InterP 28.3 66 0.0014 34.2 4.1 45 181-225 73-123 (393)
284 PF11618 DUF3250: Protein of u 27.7 1.8E+02 0.004 25.4 6.0 78 478-559 14-103 (107)
285 PF12738 PTCB-BRCT: twin BRCT 27.3 46 0.00099 25.6 2.0 29 122-154 32-60 (63)
286 PF10223 DUF2181: Uncharacteri 25.9 1.8E+02 0.004 29.4 6.4 53 136-188 11-68 (244)
287 PF14186 Aida_C2: Cytoskeletal 25.8 3.6E+02 0.0078 25.2 7.8 105 429-542 10-122 (147)
288 smart00268 ACTIN Actin. ACTIN 25.6 73 0.0016 33.7 3.8 45 181-225 74-124 (373)
289 PTZ00004 actin-2; Provisional 25.2 89 0.0019 33.4 4.4 46 181-226 80-131 (378)
290 PF11478 Tachystatin_B: Antimi 25.1 25 0.00054 24.4 0.1 16 142-160 1-16 (42)
291 PF07308 DUF1456: Protein of u 24.7 31 0.00068 27.7 0.6 42 12-55 4-45 (68)
292 cd04740 DHOD_1B_like Dihydroor 24.0 2.2E+02 0.0048 29.1 6.9 78 131-221 94-177 (296)
293 PRK05395 3-dehydroquinate dehy 23.9 77 0.0017 29.5 3.1 65 133-208 22-102 (146)
294 CHL00200 trpA tryptophan synth 22.1 72 0.0016 32.6 2.8 99 126-231 19-127 (263)
295 PF13202 EF-hand_5: EF hand; P 21.7 90 0.0019 19.7 2.2 23 27-49 1-25 (25)
296 cd08576 GDPD_like_SMaseD_PLD G 21.4 1.9E+02 0.0041 29.7 5.6 58 128-190 2-67 (265)
297 PF08671 SinI: Anti-repressor 21.2 96 0.0021 20.9 2.3 25 26-51 4-28 (30)
298 KOG0034 Ca2+/calmodulin-depend 20.7 3.3E+02 0.0073 26.3 6.9 60 23-93 28-93 (187)
299 PRK08136 glycosyl transferase 20.6 90 0.0019 32.8 3.2 25 164-188 109-134 (317)
300 PRK14607 bifunctional glutamin 20.5 74 0.0016 35.9 2.7 61 128-188 234-321 (534)
No 1
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=2.1e-154 Score=1253.46 Aligned_cols=550 Identities=73% Similarity=1.217 Sum_probs=471.4
Q ss_pred CCCcceeeeEeEecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhc
Q 008582 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQ 80 (561)
Q Consensus 1 ~~~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~ 80 (561)
|++++||||+||.|+|+.....+|+||..||.+|++++.||.++|.+||+++|++..++.++|++||++|+.. ..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~-----~~ 75 (581)
T PLN02222 1 MSKQTYKVCFCFRRRFRYTASEAPREIKTIFEKYSENGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSL-----LH 75 (581)
T ss_pred CCccceeEEEEeccccccccCCCcHHHHHHHHHhcCCCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhh-----hh
Confidence 8899999999999999999999999999999999877999999999999999999888999999999998621 23
Q ss_pred cCCCCHHHHHHhhcCCCCCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCC
Q 008582 81 RRGLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPN 160 (561)
Q Consensus 81 ~~~l~~~gF~~~L~s~~n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (561)
+++|+++||++||+|++|.++. +..++|||++|||||||||||||||+||||.|.||+|+|++||++||||||||||||
T Consensus 76 ~~~~~~~gF~~yL~s~~n~~~~-~~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg 154 (581)
T PLN02222 76 RNGLHLDAFFKYLFGDNNPPLA-LHEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPN 154 (581)
T ss_pred ccCcCHHHHHHHhcCCCCCCCc-cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccC
Confidence 4679999999999999999885 367999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCC
Q 008582 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFP 239 (561)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lP 239 (561)
+++++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+++||.+||+||+++|||+||.++. +....||
T Consensus 155 ~~~~~~~v~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lp 234 (581)
T PLN02222 155 SDKDDIDVLHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFP 234 (581)
T ss_pred CCCCCCeEeeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCC
Confidence 887778999999999999999999999999999999999999999999999999999999999999999874 4467999
Q ss_pred ChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccc
Q 008582 240 SPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQ 319 (561)
Q Consensus 240 SP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (561)
||++||||||||+|++++.++..... ....+...++++.++.+.++......+.++.+. +.+..+++++...+.+
T Consensus 235 sP~~Lk~kilik~K~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 309 (581)
T PLN02222 235 SPNSLKKRIIISTKPPKEYKEGKDDE----VVQKGKDLGDEEVWGREVPSFIQRNKSVDKNDS-NGDDDDDDDDGEDKSK 309 (581)
T ss_pred ChHHHCCCEEEEecCCcccccccccc----ccccccccccccccccccccccccccccccccc-cccccccccccccccc
Confidence 99999999999999987654432100 001111112222334333332221111111000 0000011111222333
Q ss_pred cccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcc
Q 008582 320 HNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPL 399 (561)
Q Consensus 320 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~ 399 (561)
...++++++|++++.+++++++...++..|.+++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+
T Consensus 310 ~~~~~~~~~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~L~RiYP~G~RvdSSNynP~ 389 (581)
T PLN02222 310 KNAPPQYKHLIAIHAGKPKGGITECLKVDPDKVRRLSLSEEQLEKAAEKYAKQIVRFTQHNLLRIYPKGTRVTSSNYNPL 389 (581)
T ss_pred cccCHHhhhheeeecccccCccchhhhcCcccccccccCHHHHHHHHHhhhHHHHHHhhhhceeeCCCCCcCcCCCCCch
Confidence 45678999999999999888777666666667889999999999999999999999999999999999999999999999
Q ss_pred cccccccceeeeecc---------------cCCCCcccCCCCC---------------CCCCceEEEEEEEecCCCCCCC
Q 008582 400 IGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVK---------------LPAKKTLKVTVYMGEGWYYDFP 449 (561)
Q Consensus 400 ~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~---------------~p~~~~L~V~Visaq~L~~~~~ 449 (561)
.||++|||||||||| ||+|||||||... .|++.+|+|+|++|++|+++++
T Consensus 390 ~~W~~G~QmVALN~QT~d~~M~LN~G~F~~NG~cGYVLKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~Visgq~~~l~~~ 469 (581)
T PLN02222 390 VGWSHGAQMVAFNMQGYGRSLWLMQGMFRANGGCGYIKKPDLLLKSGSDSDIFDPKATLPVKTTLRVTIYMGEGWYFDFR 469 (581)
T ss_pred hHhcCCcEEeeccccCCChhhhhhcchhccCCCCceEECCHHhccCCccccccCCCCCCCccceEEEEEEEcccccCCCC
Confidence 999999999999999 8999999999432 2345689999999999887666
Q ss_pred CCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeC
Q 008582 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPV 529 (561)
Q Consensus 450 ~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL 529 (561)
....+.++++||||+|+|.|.|.|+.++||+++.||+||+|||+|+|.+..||+|+|||.|+|+|..+.++|+||+++||
T Consensus 470 ~~~~~~~~~~dpyV~Vei~G~p~D~~~~rTk~v~nn~nP~W~e~f~F~i~~PeLAllRf~V~d~D~~~~ddfigq~~lPv 549 (581)
T PLN02222 470 HTHFDQYSPPDFYTRVGIAGVPGDTVMKKTKTLEDNWIPAWDEVFEFPLTVPELALLRLEVHEYDMSEKDDFGGQTCLPV 549 (581)
T ss_pred ccccCCCCCCCeeEEEEEeccCCCcceeeeEecCCCCCcccCCeeEEEEEcCceeEEEEEEEECCCCCCCcEEEEEEcch
Confidence 55566778899999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred cccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 530 SELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 530 ~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.+|++|||||||+|..|+++.+|+|||||+|.
T Consensus 550 ~~Lr~GyR~V~L~~~~g~~l~~a~Lfv~~~~~ 581 (581)
T PLN02222 550 WELSQGIRAFPLHSRKGEKYKSVKLLVKVEFV 581 (581)
T ss_pred hhhhCccceEEccCCCcCCCCCeeEEEEEEeC
Confidence 99999999999999999999999999999984
No 2
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=2e-154 Score=1254.91 Aligned_cols=554 Identities=56% Similarity=0.965 Sum_probs=467.8
Q ss_pred CcceeeeEeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCC-CCCHHHHHHHHHHHHhhhh-hhhh
Q 008582 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKED-KASKEDAQAIIDSLRELKH-LNIF 79 (561)
Q Consensus 3 ~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~-~~~~~~~~~ii~~~~~~~~-~~~~ 79 (561)
|+|||||+||.|+|+.....+|+||+.||.+|+++ +.||.++|.+||+++|+++ ..+.++|++||++++...+ ....
T Consensus 7 m~~~~~~~~~~~~~~~~~~~p~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 86 (598)
T PLN02230 7 MGSYKFCLIFTRKFRMTESGPVADVRDLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKF 86 (598)
T ss_pred CccceEEEEecCccccccCCCcHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccc
Confidence 68999999999999999999999999999999877 9999999999999999654 4688999999999985432 2233
Q ss_pred ccCCCCHHHHHHhhcCCC-CCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 008582 80 QRRGLNLEAFFKYLFGDI-NPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (561)
Q Consensus 80 ~~~~l~~~gF~~~L~s~~-n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (561)
.++.|+++||++||+|.+ |.+. +..++|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||
T Consensus 87 ~~~~~~~~~F~~yL~s~~~~~~~--~~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~w 164 (598)
T PLN02230 87 TRRNLTLDDFNYYLFSTDLNPPI--ADQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLW 164 (598)
T ss_pred cccccCHHHHHHHHcCcccCCcc--cccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEecc
Confidence 456799999999999854 4444 3579999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 008582 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (561)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~l 238 (561)
||++ ++|+|+||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.+....|
T Consensus 165 dg~~-~ep~v~HG~t~t~~i~f~~v~~~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~~~~~l 243 (598)
T PLN02230 165 PRGT-DDVCVKHGRTLTKEVKLGKCLDSIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSEGCQEF 243 (598)
T ss_pred CCCC-CCcEEeeCCCCcCCcCHHHHHHHHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCcccCCC
Confidence 9876 579999999999999999999999999999999999999999999999999999999999999999876667889
Q ss_pred CChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCC-CC-CCCCCCC--CCcc
Q 008582 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKD-DF-DGGVDND--EEDS 314 (561)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--~~~~ 314 (561)
|||++||||||||+|++++.++.+...+. .... ....++++.++.+...+.....+.+... +. ..+..++ .+..
T Consensus 244 psP~~Lk~kilik~Kk~~~~~e~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 321 (598)
T PLN02230 244 PSPEELKEKILISTKPPKEYLEANDAKEK-DNGE-KGKDSDEDVWGKEPEDLISTQSDLDKVTSSVNDLNQDDEERGSCE 321 (598)
T ss_pred CChHHHcCCEEEEecCCcccccccccccc-cccc-cccccchhhhccccccccccccccccccccccccccchhcccccc
Confidence 99999999999999998776554321110 0000 1111222333333222221111000000 00 0000000 0011
Q ss_pred ccccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCC
Q 008582 315 DDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSS 394 (561)
Q Consensus 315 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSS 394 (561)
..++...++++|++|++|+.+++++++...++..+.+++|+||||.++.+++++++.+|++||++||+||||+|+|||||
T Consensus 322 ~~~~~~~~~~els~Li~y~~~~~~~~~~~~~~~~~~~v~~~SlsE~~~~~~~~~~~~~~v~~nk~~L~RIYPkG~RvdSS 401 (598)
T PLN02230 322 SDTSCQLQAPEYKRLIAIHAGKPKGGLRMALKVDPNKIRRLSLSEQLLEKAVASYGADVIRFTQKNFLRIYPKGTRFNSS 401 (598)
T ss_pred ccccchhcCHHHhhheeeecCccCCCcchhhhcCccceeeccccHHHHHHHHHhhhHHHHHhhhhhceeeCCCCCcCCCC
Confidence 11223456899999999999999999888877777778899999999999999999999999999999999999999999
Q ss_pred CCCcccccccccceeeeecc---------------cCCCCcccCCCCCC---------------CCCceEEEEEEEecCC
Q 008582 395 NYNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVKL---------------PAKKTLKVTVYMGEGW 444 (561)
Q Consensus 395 Nf~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~~---------------p~~~~L~V~Visaq~L 444 (561)
||||+.||++|||||||||| ||+|||||||...+ +++++|+|+|++|++|
T Consensus 402 NynP~~~W~~GcQMVALN~Qt~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~~fdP~~~~~~~~~L~V~VisGq~~ 481 (598)
T PLN02230 402 NYKPQIGWMSGAQMIAFNMQGYGRALWLMEGMFRANGGCGYVKKPDFLMDAGPNGQDFYPKDNSCPKKTLKVKVCMGDGW 481 (598)
T ss_pred CCCchhHhcCceEEeeecccCCChHHHhhcchhccCCCCCceECCHHhcCCCccccccCCCcCCCcCcEEEEEEEEccCc
Confidence 99999999999999999999 89999999995321 2357899999999999
Q ss_pred CCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEE
Q 008582 445 YYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQ 524 (561)
Q Consensus 445 ~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq 524 (561)
++++++...+.++++||||+|+|+|.|.|+.++||+++.|++||+|||+|.|.+..||+|+|||.|+|+|..++++|+||
T Consensus 482 ~l~~~k~~~~~~s~~DpyV~Vei~Gvp~D~~~~kT~v~~n~~nP~Wneef~F~l~vPELAllRf~V~d~d~~~~ddfiGQ 561 (598)
T PLN02230 482 LLDFKKTHFDSYSPPDFFVRVGIAGAPVDEVMEKTKIEYDTWTPIWNKEFIFPLAVPELALLRVEVHEHDINEKDDFGGQ 561 (598)
T ss_pred cCCCccccCCCCCCCCceEEEEEEECCCCCcccceeccCCCCCCccCCeeEEEEEcCceeEEEEEEEECCCCCCCCEEEE
Confidence 88776666677889999999999999999999999988888999999999999999999999999999998788999999
Q ss_pred EEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 525 TCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 525 ~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+|+||.+|++|||||||+|..|+++.+++|||||+|.
T Consensus 562 ~~lPv~~Lr~GyR~V~L~~~~G~~l~~~~Ll~~f~~~ 598 (598)
T PLN02230 562 TCLPVSEIRQGIHAVPLFNRKGVKYSSTRLLMRFEFV 598 (598)
T ss_pred EEcchHHhhCccceEeccCCCcCCCCCCeeEEEEEeC
Confidence 9999999999999999999999999999999999985
No 3
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=1.8e-150 Score=1219.78 Aligned_cols=532 Identities=54% Similarity=0.921 Sum_probs=457.4
Q ss_pred CcceeeeEeEecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccC
Q 008582 3 KQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRR 82 (561)
Q Consensus 3 ~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~ 82 (561)
+++|+||+||.|+|+.....+|+||..||.+|++++.||.++|.+||+++|++...+.+.|++||++|+..+.. ..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~ei~~if~~~s~~~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~--~~~~ 79 (567)
T PLN02228 2 SESFKVCFCCSRSFKEKTREPPVSIKRLFEAYSRNGKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVF--HHHG 79 (567)
T ss_pred CccceEEEEeCCcCCcCCCCCcHHHHHHHHHhcCCCccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhh--cccC
Confidence 58999999999999999999999999999999988899999999999999999878899999999999843211 1234
Q ss_pred CCCHHHHHHhhcCCCCCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC
Q 008582 83 GLNLEAFFKYLFGDINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK 162 (561)
Q Consensus 83 ~l~~~gF~~~L~s~~n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~ 162 (561)
.|+++||++||+|.+|.++.++..++|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++
T Consensus 80 ~~~~~gF~~yl~s~~n~~~~~~~~v~qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~ 159 (567)
T PLN02228 80 LVHLNAFYRYLFSDTNSPLPMSGQVHHDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPS 159 (567)
T ss_pred ccCHHHHHHHhcCcccCCCCccccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCC
Confidence 69999999999999999987667899999999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 008582 163 KDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (561)
Q Consensus 163 ~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~ 242 (561)
+++||||||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||++||||+||.++.+....||||+
T Consensus 160 ~~~p~v~Hg~t~ts~i~f~~v~~~I~~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~~~~~~lpsP~ 239 (567)
T PLN02228 160 GNAAEVRHGRTLTSHEDLQKCLNAIKDNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTSESTKHFPSPE 239 (567)
T ss_pred CCCCEEEeCCcccCceEHHHHHHHHHHhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCCCccCCCCChH
Confidence 77899999999999999999999999999999999999999999999999999999999999999998766678899999
Q ss_pred hccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCcccccccccc
Q 008582 243 SLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNE 322 (561)
Q Consensus 243 ~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (561)
+||||||||+|++++..+.+... +. ...++++..++. .. +.++ ...+ ..+.....
T Consensus 240 ~Lk~kilik~Kk~~~~~~~~~~~----~~--~~~~~~~~~~~~-~~---------~~~~--------~~~~-~~~~~~~~ 294 (567)
T PLN02228 240 ELKNKILISTKPPKEYLESKTVQ----TT--RTPTVKETSWKR-VA---------DAEN--------KILE-EYKDEESE 294 (567)
T ss_pred HHCCCEEEEecCCcccccccccc----cc--cccccccccccc-cc---------cchh--------hccc-cccccchh
Confidence 99999999999976543321100 00 000000000000 00 0000 0000 00111235
Q ss_pred chhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCccccc
Q 008582 323 APEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGW 402 (561)
Q Consensus 323 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W 402 (561)
+++|++|++++..++++++.......|...+++||||+++.+++++.+.+|++||++||+||||+|+|+|||||||+.||
T Consensus 295 ~~~ls~li~~~~~~~~~~~~~~~~~~p~~~~~~S~sE~~~~~~~~~~~~~~v~hNkr~l~RvYP~g~RvdSSNy~P~~~W 374 (567)
T PLN02228 295 AVGYRDLIAIHAANCKDPLKDCLSDDPEKPIRVSMDEQWLETMVRTRGTDLVRFTQRNLVRIYPKGTRVDSSNYDPHVGW 374 (567)
T ss_pred hhhhhhheeeeccccccCcchhhccCcccceeeccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCCCCCCCchhHh
Confidence 68899999998887766665544444555678999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeecc---------------cCCCCcccCCCCC------------CCCCceEEEEEEEecCCCCCCCCCccCC
Q 008582 403 SHGAQMVAFNMQ---------------TGPHNEVFDPKVK------------LPAKKTLKVTVYMGEGWYYDFPHTHFDA 455 (561)
Q Consensus 403 ~~G~QmVALN~Q---------------nG~~Gyvl~P~~~------------~p~~~~L~V~Visaq~L~~~~~~~~~~~ 455 (561)
++|||||||||| ||+|||||||... .|++.+|+|+|++||+|++++.....+.
T Consensus 375 ~~G~QmVALN~QT~d~~M~lN~g~F~~NG~cGYVLKP~~Lr~~~~~f~p~~~~p~~~~L~I~ViSGq~l~lp~~~~~~~~ 454 (567)
T PLN02228 375 THGAQMVAFNMQGHGKQLWIMQGMFRANGGCGYVKKPRILLDEHTLFDPCKRLPIKTTLKVKIYTGEGWDLDFHLTHFDQ 454 (567)
T ss_pred cCccEEeeecccCCChHHHhhcCchhhCCCCCceeCchhhcccccccCCccCCCcCceEEEEEEECCccCCCCCCCCCCC
Confidence 999999999999 8999999999632 2445689999999999976554444556
Q ss_pred CCCCCceeEEEEeccCCCceeeecccCCCCCCCcc-ccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCC
Q 008582 456 YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 456 ~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~W-NE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~ 534 (561)
++++||||+|++.|.|.|..++||+++.||+||+| ||+|.|.+..||+|+|||.|+|+|..+.++|+||+++||++|++
T Consensus 455 ~~~~DpyV~Vei~G~p~D~~~~rTk~~~n~~nP~W~~e~f~F~~~~pELA~lRf~V~D~d~~~~d~figq~~lPv~~Lr~ 534 (567)
T PLN02228 455 YSPPDFFVKIGIAGVPRDTVSYRTETAVDQWFPIWGNDEFLFQLRVPELALLWFKVQDYDNDTQNDFAGQTCLPLPELKS 534 (567)
T ss_pred CCCCCcEEEEEEEecCCCCCcceeeccCCCCCceECCCeEEEEEEcCceeEEEEEEEeCCCCCCCCEEEEEEcchhHhhC
Confidence 67899999999999999999999999998999999 99999999999999999999999877789999999999999999
Q ss_pred CceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 535 GIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 535 GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|||||||+|..|+++.+|+|||||+|.
T Consensus 535 GYR~VpL~~~~G~~l~~atLfv~~~~~ 561 (567)
T PLN02228 535 GVRAVRLHDRAGKAYKNTRLLVSFALD 561 (567)
T ss_pred CeeEEEccCCCCCCCCCeEEEEEEEEc
Confidence 999999999999999999999999973
No 4
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-150 Score=1218.58 Aligned_cols=531 Identities=46% Similarity=0.718 Sum_probs=460.1
Q ss_pred CCCcceeeeEeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhh
Q 008582 1 MSKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIF 79 (561)
Q Consensus 1 ~~~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~ 79 (561)
+.+++||+|+|++++|.-. .+.||||.++|.+|+.+ ++|+.++|.+||+.+|++..++.+.|++||++|+..++. .
T Consensus 182 ~~~~~~k~~~~~~~~~~~~-~~~rpev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~--~ 258 (746)
T KOG0169|consen 182 DNSQTGKLEEEEFVKFRKE-LTKRPEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEF--R 258 (746)
T ss_pred HhhccceehHHHHHHHHHh-hccCchHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhc--c
Confidence 4689999999999999666 45566999999999987 999999999999999999999999999999999965541 2
Q ss_pred ccCCCCHHHHHHhhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 008582 80 QRRGLNLEAFFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (561)
Q Consensus 80 ~~~~l~~~gF~~~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (561)
..+.|+++||++||+|..+.+++| +..|+|||++|||||||+|||||||+||||.|+||+|+||+||++||||||||||
T Consensus 259 ~~~~l~ldgF~~yL~S~~~~~fdp~~~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~W 338 (746)
T KOG0169|consen 259 RHGLLSLDGFTRYLFSPDCNPFDPIHRKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCW 338 (746)
T ss_pred ccceecHHHHHHHhcCccCCCCCcccchhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecc
Confidence 234599999999999999999975 6889999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCC
Q 008582 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKE 237 (561)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~ 237 (561)
||++ ++|+|+|||||||+|.|++||+|||+|||.+|+|||||||||||+++||++||++|++||||+||.++.+ ....
T Consensus 339 dg~~-~epvV~HG~TlTs~I~l~~vl~aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~ 417 (746)
T KOG0169|consen 339 DGPN-GEPVVYHGHTLTSKILLRDVLRAIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKE 417 (746)
T ss_pred cCCC-CCeeEecCcccccceeHHHHHHHHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCcccc
Confidence 9987 6899999999999999999999999999999999999999999999999999999999999999998765 6799
Q ss_pred CCChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccc
Q 008582 238 FPSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDK 317 (561)
Q Consensus 238 lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (561)
|||||+||||||||+|++++.+.... .+.++.....++++.+...+. .+++...+.+
T Consensus 418 lPSPe~LK~KILik~Kk~~~~~~~~~---------------------~~~~~~~~~d~~~~~e~s~e~--~~~~~~~~~~ 474 (746)
T KOG0169|consen 418 LPSPEELKNKILIKGKKLKELLEADS---------------------KEPSSFEVTDEDEDKESSTEN--DKSETDGQKK 474 (746)
T ss_pred CcCHHHHhcCEEEecCCCCccccccc---------------------ccccccccccccccccccccc--cccccccccc
Confidence 99999999999999999876554311 000000000000000000000 0000010112
Q ss_pred cccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCC
Q 008582 318 SQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYN 397 (561)
Q Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~ 397 (561)
....++++|++||.|+.+++++++...++.+ .+++++||||+++.++++..+.+|++||+++|+||||+|+|+||||||
T Consensus 475 ~~~~~~~els~Lv~~~~~~~~~~~~~~~~~~-~~~~~~S~sE~~~~k~~~~~~~~~v~~t~r~L~RvYP~~~R~dSSNyn 553 (746)
T KOG0169|consen 475 SRKILAPELSDLVAYHKSVPFGGFQLSLTVD-NKVERLSLSERKAKKLIKEYGPDFVRHTQRNLLRVYPKGLRVDSSNYN 553 (746)
T ss_pred hhhhhhHHHHHHHHHhhccccCCceeccccC-CccccCCccHHHHHHHHHHhhhHHHHHhHhheeeecCCccccCCCCCC
Confidence 2236789999999999999999888877764 578899999999999999999999999999999999999999999999
Q ss_pred cccccccccceeeeecc---------------cCCCCcccCCCC------------C-CCCCceEEEEEEEecCCCCCCC
Q 008582 398 PLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKV------------K-LPAKKTLKVTVYMGEGWYYDFP 449 (561)
Q Consensus 398 P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~------------~-~p~~~~L~V~Visaq~L~~~~~ 449 (561)
|+.||++|||||||||| |||||||+||.. . .|+.++|+|+|++||+|+.++.
T Consensus 554 Pq~~W~~G~QmVAlN~Qt~G~~l~L~~G~Fr~NGgCGYVlKP~~L~~~~~~F~P~~~~~~~~~tL~IkI~sGq~~~~~~~ 633 (746)
T KOG0169|consen 554 PQEFWNHGCQMVALNFQTPGRMLDLNQGMFRANGGCGYVLKPDFLLDSGSTFDPKSNLPPVKKTLKIKIISGQGWLPDFG 633 (746)
T ss_pred hHHHHhcCceEEEEecCCCChhhhhhhhhhccCCCccceECcHHHcCCCCccCCCCCCCCCCceeEEEEEecCcccCCCC
Confidence 99999999999999999 999999999942 1 2344579999999999987665
Q ss_pred CCccCCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEe
Q 008582 450 HTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLP 528 (561)
Q Consensus 450 ~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lp 528 (561)
.+.. ...+||||.|+|+|.|.|+.+++|+++.+| +||.|+|+|+|++..||+|+|||.|+|+|..++|||+||+|+|
T Consensus 634 ~~~~--~~~~dP~v~VeI~Gvp~D~~~~~Tk~v~~NgfnP~W~e~f~F~l~vPELAliRF~V~d~d~~~~ddF~GQ~tlP 711 (746)
T KOG0169|consen 634 KTKF--GEISDPDVYVEIAGVPADCAEQKTKVVKNNGFNPIWDEEFEFQLSVPELALIRFEVHDYDYIGKDDFIGQTTLP 711 (746)
T ss_pred CCcc--cccCCCCEEEEEcccccchhhhhceeeccCCcCcccCCeEEEEEeccceeEEEEEEEecCCCCcccccceeecc
Confidence 5433 355799999999999999999999977665 9999999999999999999999999999999999999999999
Q ss_pred CcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 529 VSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 529 L~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+++|++|||||||+|..|+.+..|+|||||.|.
T Consensus 712 ~~~L~~GyRhVpL~~~~G~~~~~asLfv~i~~~ 744 (746)
T KOG0169|consen 712 VSELRQGYRHVPLLSREGEALSSASLFVRIAIV 744 (746)
T ss_pred HHHhhCceeeeeecCCCCccccceeEEEEEEEe
Confidence 999999999999999999999999999999973
No 5
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=8.2e-148 Score=1205.40 Aligned_cols=549 Identities=61% Similarity=1.043 Sum_probs=461.5
Q ss_pred CCcceeeeEeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhh-hhhhh
Q 008582 2 SKQTYRVCFCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELK-HLNIF 79 (561)
Q Consensus 2 ~~~~~~~~~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~-~~~~~ 79 (561)
...+|++|.||.|+++...+++|+||..||.+|+++ +.||.++|.+||+++|++..++.++|++||++|.... +...+
T Consensus 15 g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~~~ 94 (599)
T PLN02952 15 GSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVTRY 94 (599)
T ss_pred CCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccccc
Confidence 445899999999999999999999999999999977 8999999999999999998889999999999886332 22234
Q ss_pred ccCCCCHHHHHHhhcC-CCCCCCCCCCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEee
Q 008582 80 QRRGLNLEAFFKYLFG-DINPPLSPTPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIW 158 (561)
Q Consensus 80 ~~~~l~~~gF~~~L~s-~~n~~~~~~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~W 158 (561)
.+..|+++||++||+| +.|.+.. ..++|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||
T Consensus 95 ~~~~l~~~~F~~~l~s~~~~~p~~--~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~w 172 (599)
T PLN02952 95 TRHGLNLDDFFHFLLYDDLNGPIT--PQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIELDLW 172 (599)
T ss_pred cccCcCHHHHHHHHcCcccccccc--ccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEEEee
Confidence 4567999999999996 4565554 479999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCC
Q 008582 159 PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEF 238 (561)
Q Consensus 159 dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~l 238 (561)
||+++++|||+||||||++|+|+|||+||++|||++|+|||||||||||+.+||.+||+||+++|||+||.|+.+....|
T Consensus 173 dg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~p~~~~~~~l 252 (599)
T PLN02952 173 PGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYYPESDSLVQF 252 (599)
T ss_pred cCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCC
Confidence 99988889999999999999999999999999999999999999999999999999999999999999999876667899
Q ss_pred CChhhccCcEEEecCCCCchhhhHhhhh-hhcc--ccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccc
Q 008582 239 PSPESLKRRIIISTKPPKEYLEAKEEKE-KEND--SQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSD 315 (561)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (561)
|||++||||||||+|+++..++.+.... +..+ ...+...++++ .+...+.... .+.+.+.. .+....+
T Consensus 253 psP~~Lk~kilik~Kk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~--~~~~~~~ 323 (599)
T PLN02952 253 PSPESLKHRIIISTKPPKEYLESSGPIVIKKKNNVSPSGRNSSEET---EEAQTLESML----FEQEADSR--SDSDQDD 323 (599)
T ss_pred CChHHhCCCEEEEecCCchhccccccccccccccCCcccccCCccc---cccccccccc----cccccccc--ccccchh
Confidence 9999999999999999876654431100 0000 00000000000 0000000000 00000000 0000011
Q ss_pred cccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCC
Q 008582 316 DKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSN 395 (561)
Q Consensus 316 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSN 395 (561)
.+.....+++|++|+.|+.+++++.+.+.++..+.+++++||||+++.+++++++.+|++||++||+||||+|+|+||||
T Consensus 324 ~~~~~~~~~~~~~l~~~~~~k~~~~~~~~~~~~~~~~~~~SlsE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~R~dSsN 403 (599)
T PLN02952 324 NKSGELQKPAYKRLITIHAGKPKGTLKDAMKVAVDKVRRLSLSEQELEKAATTNGQDVVRFTQRNILRIYPKGTRITSSN 403 (599)
T ss_pred hhcccccchhhhhheEEeccccccccchhhhcccccccccccCHHHHHHHHHhhHHHHHHHhhhhceeeCCCCCcCcCCC
Confidence 12233457899999999999888777666655556678899999999999999999999999999999999999999999
Q ss_pred CCcccccccccceeeeecc---------------cCCCCcccCCCCC---------------CCCCceEEEEEEEecCCC
Q 008582 396 YNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVK---------------LPAKKTLKVTVYMGEGWY 445 (561)
Q Consensus 396 f~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~---------------~p~~~~L~V~Visaq~L~ 445 (561)
|||+.||++|||||||||| ||+|||||||... .|++++|+|+|++|++|+
T Consensus 404 y~P~~~W~~G~QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVlKP~~lr~~~~~~~~fdp~~~~~~~~~L~V~VisGq~l~ 483 (599)
T PLN02952 404 YKPLIGWMHGAQMIAFNMQGYGKSLWLMHGMFRANGGCGYLKKPDFLMKKGFHDEVFDPKKKLPVKKTLKVKVYLGDGWR 483 (599)
T ss_pred CCchhHhcCccEEeeecccCCChHHHhhhchhccCCCCCceECCHHHcccCCcccccCCCCCCCccceEEEEEEECcccC
Confidence 9999999999999999999 8999999999532 234578999999999998
Q ss_pred CCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEE
Q 008582 446 YDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQT 525 (561)
Q Consensus 446 ~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~ 525 (561)
+++.....+.++++||||+|.++|.|.|..++||+++.||+||+|||+|.|.+..|++|+|+|.|+|+|..+.++|+||+
T Consensus 484 lp~~~~~~~~~~~~D~yV~V~i~G~p~D~~~~kTkvi~nN~nPvWnE~F~F~i~~PELAllrf~V~D~D~~~~ddfiGq~ 563 (599)
T PLN02952 484 LDFSHTHFDSYSPPDFYTKMYIVGVPADNAKKKTKIIEDNWYPAWNEEFSFPLTVPELALLRIEVREYDMSEKDDFGGQT 563 (599)
T ss_pred CCCccccCCccCCCCceEEEEEeccCCCCcceeeeeccCCCCcccCCeeEEEEEcCCccEEEEEEEecCCCCCCCeEEEE
Confidence 76555556777889999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EEeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 526 CLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 526 ~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
++||++|++|||||||+|.+|++++.++|||||+|.
T Consensus 564 ~lPv~~Lr~GyR~VpL~~~~G~~l~~a~Llv~f~~~ 599 (599)
T PLN02952 564 CLPVSELRPGIRSVPLHDKKGEKLKNVRLLMRFIFV 599 (599)
T ss_pred EcchhHhcCCceeEeCcCCCCCCCCCEEEEEEEEeC
Confidence 999999999999999999999999999999999984
No 6
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=5.4e-140 Score=1122.06 Aligned_cols=494 Identities=40% Similarity=0.725 Sum_probs=419.0
Q ss_pred EeEecccCCcCCCCchHHHHHHHHhhCC-CCcCHHHHHHHH---HHHcCCCCCCHHHHHHHHHHHHhhhh-hhhh-ccCC
Q 008582 10 FCFRRRFHVAASEAPDAVKSMFDQYSEN-GTMTVDHLHRFL---IEVQKEDKASKEDAQAIIDSLRELKH-LNIF-QRRG 83 (561)
Q Consensus 10 ~~~~r~~~~~~~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl---~~~Q~~~~~~~~~~~~ii~~~~~~~~-~~~~-~~~~ 83 (561)
|.|.|+|+.+..++++||..+|.+|+.+ ..|+.++|.+|| .++|+|..++.++|+.|++++...++ +..+ ..+.
T Consensus 1 ~~~~~~~~~~~~~~p~~v~~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~ 80 (537)
T PLN02223 1 MLLRKKFEMHPANQPDLILNFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRC 80 (537)
T ss_pred CccccCCCCCCCCCcHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccc
Confidence 4689999999999999999999999876 999999999999 99999999999999999999874432 3333 2367
Q ss_pred CCHHHHHHhhcCC-CCCCCCCCCCc-cCCCCCCccceeecccccccccCCCCCCC-CChHHHHHHHhCCCcEEEEEeeCC
Q 008582 84 LNLEAFFKYLFGD-INPPLSPTPVV-HHDMTAPVSHYFIYTGHNSYLTGNQLNSD-CSDVPIIRALQKGVRVIELDIWPN 160 (561)
Q Consensus 84 l~~~gF~~~L~s~-~n~~~~~~~~~-~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~-Ss~e~Y~~aL~~GCRcvElD~Wdg 160 (561)
|+++||++||+|+ .|.+.. ..+ +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||
T Consensus 81 l~~~~f~~~L~s~~~n~~~~--~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~ 158 (537)
T PLN02223 81 LELDHLNEFLFSTELNPPIG--DQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPD 158 (537)
T ss_pred cCHHHHHHHhcCcccCCccc--cccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCC
Confidence 9999999999975 455443 346 99999999999999999999999999999 999999999999999999999987
Q ss_pred CCCCCceEEeCCcccccchHHHHHHHHhhhccccC-CCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCC
Q 008582 161 SKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVAS-EYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEF 238 (561)
Q Consensus 161 ~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S-~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~l 238 (561)
++ ++|+|+||||||++|+|+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+++. +....|
T Consensus 159 ~~-~~~~v~hG~tlts~i~f~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~l 237 (537)
T PLN02223 159 GK-DGICVRPKWNFEKPLELQECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEF 237 (537)
T ss_pred CC-CCCeEeeCCceecceEHHHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccC
Confidence 54 57899999999999999999999999999998 9999999999999999999999999999999999764 557899
Q ss_pred CChhhccCcEEEecCCCCchhhhHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCcccccc
Q 008582 239 PSPESLKRRIIISTKPPKEYLEAKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKS 318 (561)
Q Consensus 239 PSP~~Lk~KIlik~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (561)
|||++||||||||+|++++.+++.. ++ +. . +. .++ .+..+
T Consensus 238 PSP~~Lk~kIlik~K~~~~~~~~~~---------------~~---~~-~-~~---------~~~------~~~~~----- 277 (537)
T PLN02223 238 PSPAELQNKILISRRPPKELLYAKA---------------DD---GG-V-GV---------RNE------LEIQE----- 277 (537)
T ss_pred CChHHhCCCEEEEcCCCcccccccc---------------cc---cc-c-cc---------ccc------ccccc-----
Confidence 9999999999999999865432210 00 00 0 00 000 00000
Q ss_pred ccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhh--cchhHHHhhccceeeeeCCCCC-CCCCC
Q 008582 319 QHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGT--YGNDIVRFTQRNLLRIYPKGIR-VDSSN 395 (561)
Q Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~--~~~~~~~~~~~~l~RvYP~g~R-idSSN 395 (561)
....++|++++.++..++++.+ .+++|.++.++.+. ++.++++||++||+||||+|+| +||||
T Consensus 278 -~~~~~~y~~li~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~~v~ft~~~l~RiYPkG~R~~dSSN 343 (537)
T PLN02223 278 -GPADKNYQSLVGFHAVEPRGML-------------QKALTGKADDIQQPGWYERDIISFTQKKFLRTRPKKKNLLINAP 343 (537)
T ss_pred -cccccceeeeeeeeccccccch-------------hhhhccchhhhhhccccchhhhhhcccceEEECCCCCccccCCC
Confidence 1224678899988877665432 23444444444332 4678999999999999999999 59999
Q ss_pred CCcccccccccceeeeecc---------------cCCCCcccCCCCCC---------C-----CCceEEEEEEEecCCCC
Q 008582 396 YNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPKVKL---------P-----AKKTLKVTVYMGEGWYY 446 (561)
Q Consensus 396 f~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~~~~---------p-----~~~~L~V~Visaq~L~~ 446 (561)
|||+.+|++|||||||||| ||+||||+||...+ | .+++|+|+|++|++|+.
T Consensus 344 YnP~~~W~~GcQmVALN~QT~d~~M~LN~G~F~~NG~CGYVLKP~~Lr~~~~~~~FdP~~~~~~~~~L~V~Visgq~~~~ 423 (537)
T PLN02223 344 YKPQRAWMHGAQLIALSRKDDKEKLWLMQGMFRANGGCGYVKKPDFLLNAGPSGVFYPTENPVVVKILKVKIYMGDGWIV 423 (537)
T ss_pred CCChhhcccceeEeeeccCCCChhHHhhcchhccCCCCCceECChhhccCCcccccCCCCCcccceEEEEEEEEcccccC
Confidence 9999999999999999999 89999999995321 1 24679999999999986
Q ss_pred CCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEE
Q 008582 447 DFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTC 526 (561)
Q Consensus 447 ~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~ 526 (561)
+++++. +..+.+||||+|+|.|.|.|+.+++|++..|++||+|||+|.|.+.+||+|+|||.|+|+|..++++|+||++
T Consensus 424 ~~~k~~-~~~s~~DpyV~VeI~Gvp~D~~~~kT~v~nNg~nPvWne~F~F~i~~PELAlLrf~V~D~D~~~~ddfiGQ~~ 502 (537)
T PLN02223 424 DFKKRI-GRLSKPDLYVRISIAGVPHDEKIMKTTVKNNEWKPTWGEEFTFPLTYPDLALISFEVYDYEVSTADAFCGQTC 502 (537)
T ss_pred Cccccc-CCCCCCCeEEEEEEeeccCCcceeEEEeCCCCcCceecceeEEEEEccCceEEEEEEEecCCCCCCcEEEEEe
Confidence 554332 4457899999999999999999999987777799999999999999999999999999999888899999999
Q ss_pred EeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 527 LPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 527 lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+||.+|++|||||||+|.+|+++.+++|||||+|.
T Consensus 503 LPv~~Lr~GyR~VpL~~~~g~~l~~~~Ll~~f~~~ 537 (537)
T PLN02223 503 LPVSELIEGIRAVPLYDERGKACSSTMLLTRFKWS 537 (537)
T ss_pred cchHHhcCCceeEeccCCCcCCCCCceEEEEEEeC
Confidence 99999999999999999999999999999999984
No 7
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.2e-131 Score=1066.74 Aligned_cols=525 Identities=30% Similarity=0.451 Sum_probs=414.5
Q ss_pred cCCCCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCC--------CCHHHHHHHHHHHHhhhhhhhhccCCCCHHH
Q 008582 19 AASEAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDK--------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEA 88 (561)
Q Consensus 19 ~~~~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~--------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~g 88 (561)
..+|+|+||+.||.+++++ ++||+++|.+||++.|+++. ++..++..||++|++.... ..+++|+.+|
T Consensus 215 ~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~--a~~gqms~dg 292 (1189)
T KOG1265|consen 215 NKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDN--AEKGQMSTDG 292 (1189)
T ss_pred HhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhh--hhccccchhh
Confidence 4579999999999999876 89999999999999999975 4679999999999964321 2457899999
Q ss_pred HHHhhcCCCCCCCCC-CCCccCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCC-CCc
Q 008582 89 FFKYLFGDINPPLSP-TPVVHHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNV 166 (561)
Q Consensus 89 F~~~L~s~~n~~~~~-~~~~~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~p 166 (561)
|.+||++++|+++.+ ....++||+||||||||||||||||||+||.|.||+|||++||+.||||||||||||.+. +||
T Consensus 293 f~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdgk~~d~EP 372 (1189)
T KOG1265|consen 293 FVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDGKGEDEEP 372 (1189)
T ss_pred hHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecCCCCCCCc
Confidence 999999999999864 356899999999999999999999999999999999999999999999999999999543 579
Q ss_pred eEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-----CCCCCCCCh
Q 008582 167 DVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-----ECLKEFPSP 241 (561)
Q Consensus 167 iv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-----~~~~~lPSP 241 (561)
||+||.|||+.|.|+|||+||+++||++|+||||||+|||||+.||.+||+||++||||+|++.|. ++...||||
T Consensus 373 vITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~pgv~lPsP 452 (1189)
T KOG1265|consen 373 VITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEPGVPLPSP 452 (1189)
T ss_pred eeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999653 335789999
Q ss_pred hhccCcEEEecCCCCchhhhHh--hhhhhcccc-CCCCC----Ccccc---cc-----CC----CCCccccCCCCCC---
Q 008582 242 ESLKRRIIISTKPPKEYLEAKE--EKEKENDSQ-RGKGS----ADEEA---WG-----KE----VPNLKSLNNSACD--- 299 (561)
Q Consensus 242 ~~Lk~KIlik~K~~~~~~~~~~--~~~~~~~~~-~~~~~----~~~~~---~~-----~~----~~~~~~~~~~~~~--- 299 (561)
++||+|||||+||..-...... ...+..+.+ .+..+ .++.. .| .+ -..+......++.
T Consensus 453 ~~Lr~KILIKnKKk~~~~~~~~~~~~~~~~~e~~~~s~~~~~~~~d~~~~~~~~~~~ge~~~~~~~~~g~~~~~~~~~~~ 532 (1189)
T KOG1265|consen 453 EDLRRKILIKNKKKHFEKHESDQFRSRKKLGEEAEGSSSPSAEAEDDSEEQVGLSLSGEERAHPEVELGGERPADDEAHP 532 (1189)
T ss_pred HHHhhhhhccccccccccccccccccccccCcccccCCCCcccccCccccccCcccccccccCcccccccccCCccccch
Confidence 9999999999997532111000 000000000 00000 00000 00 00 0000000000000
Q ss_pred CCCCCCC-C-CCCCC------ccccccccccchhhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcch
Q 008582 300 KDDFDGG-V-DNDEE------DSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGN 371 (561)
Q Consensus 300 ~~~~~~~-~-~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~ 371 (561)
+.+.++. . ..++. +........+++++|+||+|.....+.+|.-+-+ ...+++|+||+|+++..++++++.
T Consensus 533 E~~ee~~~~~l~e~~~~~~~~e~~ag~e~~a~~e~S~lVNyiqpvkf~sfe~a~k-rN~~f~msSf~E~~~~~~Lk~~~i 611 (1189)
T KOG1265|consen 533 ELDEESEAKQLSEDPEKTTADEGTAGAETNAHEEMSSLVNYIQPVKFSSFEIAEK-RNRHFEMSSFDESTGLGYLKKSPI 611 (1189)
T ss_pred hhhhhhhhhcccccccccCCCccccchhhhhHHHHHhhhhhcccccccchhhhhh-hcceeeeeechhHHHHHHHHhCch
Confidence 0000000 0 00000 0000112235789999998755444445543333 235789999999999999999999
Q ss_pred hHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc---------------cCCCCcccCCC-----------
Q 008582 372 DIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ---------------TGPHNEVFDPK----------- 425 (561)
Q Consensus 372 ~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q---------------nG~~Gyvl~P~----------- 425 (561)
+||+||+++|+||||+|+|||||||+|+.|||+|||||||||| ||+|||++||.
T Consensus 612 efV~yNK~QlSRIYPKgtRvdSSNymPqifWnaGcQmVsLNfQT~dlaMQlN~g~FEyNG~sGYllKPdfmRrpDr~fdP 691 (1189)
T KOG1265|consen 612 EFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLAMQLNMGMFEYNGGSGYLLKPDFMRRPDRQFDP 691 (1189)
T ss_pred HHhhhhhHhhhccccCcccccccccchHHHHhccceEEEeeccCccHHHHhhhhheeecCCccceeChHHhhCCCcCcCC
Confidence 9999999999999999999999999999999999999999999 89999998884
Q ss_pred -CCCC----CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCcee--eecccCCCC-CCCccccE-EEE
Q 008582 426 -VKLP----AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVM--KKTKTLEDN-WIPSWNEE-FEF 496 (561)
Q Consensus 426 -~~~p----~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k--~kTkvi~nn-~nP~WNE~-f~F 496 (561)
...+ ++.+++|+||+||-|.. ..+..||+|.+.|+|.|..+ .||+++.+| +||+|+|. |.|
T Consensus 692 Fse~~VdgvIA~t~sV~VISgqFLSd----------rkvgtyVEVdmfgLP~Dt~Rk~~rtrt~~~n~~npvy~eepfvF 761 (1189)
T KOG1265|consen 692 FSESPVDGVIAATLSVTVISGQFLSD----------RKVGTYVEVDMFGLPTDTIRKEFRTRTVQGNSFNPVYEEEPFVF 761 (1189)
T ss_pred cccCcccceEEeeEEEEEEeeeeccc----------cccCceEEEEecCCCchhhhhhhhhccccCCCCCcccccCCccc
Confidence 2222 35789999999997742 12346999999999999874 489998876 89999855 999
Q ss_pred e-eecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEE
Q 008582 497 P-LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 497 ~-v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
. |..|++|+|||.|+++. +.|||+..+||+.|+.|||||.|+++.|+|+..+.|||.|+.
T Consensus 762 ~KVvLpeLA~lRiavyeEg----gK~ig~RIlpvd~l~~GYrhv~LRse~Nqpl~lp~Lfv~i~~ 822 (1189)
T KOG1265|consen 762 RKVVLPELASLRIAVYEEG----GKFIGQRILPVDGLNAGYRHVCLRSESNQPLTLPALFVYIVL 822 (1189)
T ss_pred ceecccchhheeeeeeccC----CceeeeeccchhcccCcceeEEecCCCCCccccceeEEEEEe
Confidence 6 77999999999999965 689999999999999999999999999999999999999975
No 8
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-114 Score=925.47 Aligned_cols=511 Identities=32% Similarity=0.503 Sum_probs=394.3
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCCCCCCCCC-CCccCC-CCCC
Q 008582 38 GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSPT-PVVHHD-MTAP 114 (561)
Q Consensus 38 ~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~~-~~~~~d-m~~P 114 (561)
.+.+..+|++||..+|++..++. ..++..+.+|-+. ...-.+..-|+++.|..||+|..|+.+++. ..|..| |+.|
T Consensus 236 ~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D-~~re~~EPyl~v~EFv~fLFSreNslWd~k~d~V~~d~Mn~P 314 (1267)
T KOG1264|consen 236 SVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDD-TMRETAEPYLFVDEFVTFLFSRENSLWDSKYDAVDMDDMNNP 314 (1267)
T ss_pred eEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhh-hhhhccCcceeHHHHHHHHhhcccccccccccccchhhhcCc
Confidence 46889999999999999976543 3456666666532 111123457999999999999999999865 456665 9999
Q ss_pred ccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhcccc
Q 008582 115 VSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA 194 (561)
Q Consensus 115 Ls~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~ 194 (561)
||||||+||||||||||||.++||.|+|+|||++||||||||||||+++ .||||||||+||||.|.||+++||+|||++
T Consensus 315 LShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~-~pvIyHG~T~TtKIkf~DVlhtIkdhAFvt 393 (1267)
T KOG1264|consen 315 LSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDG-KPVIYHGHTRTTKIKFDDVLHTIKDHAFVT 393 (1267)
T ss_pred chhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCC-CceEEeccceeeeeehHHHHHHHHhhceec
Confidence 9999999999999999999999999999999999999999999999984 799999999999999999999999999999
Q ss_pred CCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCch--hhhHh--------
Q 008582 195 SEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEY--LEAKE-------- 263 (561)
Q Consensus 195 S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~--~~~~~-------- 263 (561)
|+||||||||.|||.+||..||+.+++||||+|++.|.+ ....||||.+||.|||||.||.+.. +....
T Consensus 394 SeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp~~edva~~m~~~edd~~ 473 (1267)
T KOG1264|consen 394 SEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLPPREDVAVNMEDKEDDHK 473 (1267)
T ss_pred cCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCCchhhhchhhhcccccch
Confidence 999999999999999999999999999999999997754 5789999999999999999986432 11100
Q ss_pred --hhh---------------------------------hhc----cccCCCCCCcc----ccc-----------------
Q 008582 264 --EKE---------------------------------KEN----DSQRGKGSADE----EAW----------------- 283 (561)
Q Consensus 264 --~~~---------------------------------~~~----~~~~~~~~~~~----~~~----------------- 283 (561)
.+. ..+ +.++....+++ +.|
T Consensus 474 nsvk~GiLy~kd~vdheWt~h~fvlt~~kl~ys~e~~~~~n~ndee~~kd~s~s~ElH~~E~WFHgkle~R~eAekll~e 553 (1267)
T KOG1264|consen 474 NSVKQGILYMKDPVDHEWTRHYFVLTDAKLSYSDEIEQTENPNDEEVPKDISPSTELHFGEKWFHGKLEGRTEAEKLLQE 553 (1267)
T ss_pred hhhhcceEEEecCCCCceeeeEEEEecceeEeehhccCcCCCCcccccccCCcchhhccchhhhhcccccchHHHHHHHH
Confidence 000 000 00000000000 000
Q ss_pred -----cC-------------------------------------------------------------------------
Q 008582 284 -----GK------------------------------------------------------------------------- 285 (561)
Q Consensus 284 -----~~------------------------------------------------------------------------- 285 (561)
|.
T Consensus 554 ycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m 633 (1267)
T KOG1264|consen 554 YCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEM 633 (1267)
T ss_pred HHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccceEE
Confidence 00
Q ss_pred ----CCC-------------Ccccc-------------------CC----------------------------------
Q 008582 286 ----EVP-------------NLKSL-------------------NN---------------------------------- 295 (561)
Q Consensus 286 ----~~~-------------~~~~~-------------------~~---------------------------------- 295 (561)
++| ++... ..
T Consensus 634 ~LtePvPqp~~He~k~W~~as~treqAE~mL~rvp~DGaFLiR~~~~~nsy~iSfr~~gkikHcRi~rdGr~fvl~t~~F 713 (1267)
T KOG1264|consen 634 RLTEPVPQPNPHESKPWYHASLTREQAEDMLMRVPRDGAFLIRKREGSNSYAISFRARGKIKHCRINRDGRHFVLGTSAF 713 (1267)
T ss_pred EecCCCCCCCcccCCccccccccHHHHHHHHhhCccCcceEEEeccCCceEEEEEEEcCcEeEEEEccCceEEEeccHHH
Confidence 000 00000 00
Q ss_pred -----------------------------------CCC---------------------C--------------CCCCC-
Q 008582 296 -----------------------------------SAC---------------------D--------------KDDFD- 304 (561)
Q Consensus 296 -----------------------------------~~~---------------------~--------------~~~~~- 304 (561)
..| . .++++
T Consensus 714 esLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~~vt~kAL~~Yka~r~DELSF 793 (1267)
T KOG1264|consen 714 ESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMPQVTVKALYDYKAKRSDELSF 793 (1267)
T ss_pred HHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCccccchhhhhhhccccCCcccccc
Confidence 000 0 00000
Q ss_pred --------------------C---------------------C-----CCCCC----------C----------ccc---
Q 008582 305 --------------------G---------------------G-----VDNDE----------E----------DSD--- 315 (561)
Q Consensus 305 --------------------~---------------------~-----~~~~~----------~----------~~~--- 315 (561)
+ + ..++. + .+.
T Consensus 794 pk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~e~~~lne~plGtl~rgi~d~~~~nvv~~~q~~n~~ 873 (1267)
T KOG1264|consen 794 PKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEELEKQILNENPLGTLCRGILDLNTYNVVKAPQGKNQK 873 (1267)
T ss_pred cccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccchhhhhhcccccchhhhccccccccceeecccccCCc
Confidence 0 0 00000 0 000
Q ss_pred -----------------------------------------cc--------cccccchhhhccceeccccccCCcccccc
Q 008582 316 -----------------------------------------DK--------SQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 316 -----------------------------------------~~--------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
.+ ....+|.|+|+||+|+..+|+..- + +
T Consensus 874 ~~vf~l~~~~~~~~~~~~aadsqEe~~eW~k~i~E~t~~a~tk~s~~k~kEk~krIA~ElSdLVVYcr~vp~~~~-~-~- 950 (1267)
T KOG1264|consen 874 SFVFILEPKWQGKPPVEFAADSQEELFEWFKSIREITWKADTKESEMKYKEKNKRIAIELSDLVVYCRPVPKTKD-N-L- 950 (1267)
T ss_pred ceEEEechhhhcCCceEEecCchHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhceEEEEecCCCccc-c-c-
Confidence 00 012356688899999888774311 1 1
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecc------------
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQ------------ 414 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~Q------------ 414 (561)
.++....|+||.|+|+.|++...+.+|+.||+++|+||||+|.|+|||||||+++|+|||||||||||
T Consensus 951 ~n~~f~em~SF~EtKadk~v~q~~~~lL~ynr~qlSRVYPkGqRldSsNy~P~pmWn~GsqmVALN~QTgDKpMQmNqa~ 1030 (1267)
T KOG1264|consen 951 ENPDFREMSSFVETKADKIVRQKPVDLLKYNRKQLSRVYPKGQRLDSSNYDPFPMWNCGSQMVALNFQTGDKPMQMNQAL 1030 (1267)
T ss_pred ccHHHHHHhcccchhHHHHHHhccccccccccccceeecCCCcccccCCCCCcccccccceeEEeeccCCCchhhhhHHH
Confidence 12334568999999999999988999999999999999999999999999999999999999999999
Q ss_pred ---cCCCCcccCCCCC-----CC---------CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceee
Q 008582 415 ---TGPHNEVFDPKVK-----LP---------AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMK 477 (561)
Q Consensus 415 ---nG~~Gyvl~P~~~-----~p---------~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~ 477 (561)
||.|||||+|..- -| .+.+|.|+||.|..|+.. ..+..-|+|+|++.|.+.|..++
T Consensus 1031 F~~ngrcGYvLqPs~Mrte~fdP~n~e~~~~l~p~~lsv~vigaRHL~k~-------gr~i~cPfVevEiiGa~~Dt~~~ 1103 (1267)
T KOG1264|consen 1031 FSLNGRCGYVLQPSSMRTEKFDPMNPESQRGLLPMTLSVKVLGARHLPKL-------GRSIACPFVEVEIIGAEYDTNKF 1103 (1267)
T ss_pred hhcCCceeeEecchhcccccCCCCChHHhccccceEEEEEEeeccccccC-------CCCccCCcEEEEEeccccCCCce
Confidence 8999999999531 11 135799999999998732 11334589999999999999988
Q ss_pred ecccCC-CCCCCccc-cEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEE
Q 008582 478 KTKTLE-DNWIPSWN-EEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLL 555 (561)
Q Consensus 478 kTkvi~-nn~nP~WN-E~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLl 555 (561)
+|+++. |++||+|| |+|+|.|.+|+.|+|||.|+|.|+.+...||||++.||.+++.|||.|||+|..-+.++-|+||
T Consensus 1104 ~t~~V~dNGlnPiWn~e~ftFeI~nPe~A~lRF~V~eeDmfs~~~FiaqA~yPv~~ik~GfRsVpLkN~ySEdlELaSLL 1183 (1267)
T KOG1264|consen 1104 KTTVVNDNGLNPIWNPEKFTFEIYNPEFAFLRFVVYEEDMFSDPNFLAQATYPVKAIKSGFRSVPLKNGYSEDLELASLL 1183 (1267)
T ss_pred EEEEeccCCCCCCCCCcceEEEeeCCceEEEEEEEecccccCCcceeeeeecchhhhhccceeeecccCchhhhhhhhhe
Confidence 777665 55999999 9999999999999999999999999988899999999999999999999999999999999999
Q ss_pred EEEEE
Q 008582 556 MHFEF 560 (561)
Q Consensus 556 v~~~f 560 (561)
|.++.
T Consensus 1184 v~i~m 1188 (1267)
T KOG1264|consen 1184 VFIEM 1188 (1267)
T ss_pred eeeEe
Confidence 99985
No 9
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=3e-103 Score=772.52 Aligned_cols=245 Identities=37% Similarity=0.562 Sum_probs=225.1
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPN-QEPIIYHGYTFTSKILFCDVLRAI 79 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k---------- 149 (258)
T cd08629 80 RDYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK---------- 149 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999764 445799999999999999999742
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
++++|++|+.|+.++.++++.....
T Consensus 150 -------------------------------------------------------i~~eLs~l~~y~~~~~f~~~~~~~~ 174 (258)
T cd08629 150 -------------------------------------------------------LVPELSDMIIYCKSVHFGGFSSPGT 174 (258)
T ss_pred -------------------------------------------------------ccHHHHHHHHHhcCCCCCCccchhh
Confidence 1356888888877777777766544
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
..+..++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+-
T Consensus 175 ~~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~ 246 (258)
T cd08629 175 SGQAFYEMASFSESRALRLLQESGNGFVRHNVSCLSRIYPAGWRTDSSNYSPVEMWNGGCQIVALNFQTPGP 246 (258)
T ss_pred cCCCcceecccCHHHHHHHHHHhHHHHHHhchhccceeCCCCCCCCCCCCCchHHhcCCceEEEecccCCCh
Confidence 334567899999999999999999999999999999999999999999999999999999999999996443
No 10
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=1.7e-102 Score=764.40 Aligned_cols=240 Identities=35% Similarity=0.549 Sum_probs=211.2
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+||||.|+||+|||++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPD-GEPIVHHGYTLTSKILFKDVIETI 79 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+++||.+||+||+++|||+|+.++. +....||||++||||||||+|++.+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~~------- 152 (254)
T cd08633 80 NKYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSRA------- 152 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCchh-------
Confidence 999999999999999999999999999999999999999998653 34578999999999999999985322
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
+++|+.|..+..+.++....
T Consensus 153 ------------------------------------------------------------Ls~l~~y~~~~~~~~~~~~~ 172 (254)
T cd08633 153 ------------------------------------------------------------LSDLVKYTKSVRVHDIETEA 172 (254)
T ss_pred ------------------------------------------------------------hhHHhhhcccCCcCcccccc
Confidence 22222222222222222111
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-
T Consensus 173 ---~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~ 242 (254)
T cd08633 173 ---TSSWQVSSFSETKAHQILQQKPAQYLRFNQRQLSRIYPSSYRVDSSNYNPQPFWNAGCQMVALNYQSEGR 242 (254)
T ss_pred ---ccceeeecccHHHHHHHHHHCHHHHHHhhhhcccccCCCCCCCCCCCCCchHHhcCCCeEEEecccCCCc
Confidence 1246899999999999999999999999999999999999999999999999999999999999996443
No 11
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=5.1e-102 Score=766.10 Aligned_cols=244 Identities=34% Similarity=0.599 Sum_probs=223.4
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPG-GEPVIYHGHTLTSKILFRDVIQAV 79 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.+. ...||||++||||||||+|+++
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~--------- 150 (258)
T cd08630 80 RQHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc---------
Confidence 99999999999999999999999999999999999999999977543 5789999999999999999841
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
++++|++|+.|+.++.++++....
T Consensus 151 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 174 (258)
T cd08630 151 --------------------------------------------------------ISPELSALAVYCQATRLRTLEPAP 174 (258)
T ss_pred --------------------------------------------------------chHHHHhhHhhcccccCCCcchhh
Confidence 246789999888877777776543
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.. ....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-
T Consensus 175 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~~~l~RiYPkgtRidSSNynP~~~W~~G~QmVALN~QT~d~ 246 (258)
T cd08630 175 VQ-PQPCQVSSLSERKAKKLIREAGNSFVRHNARQLTRVYPLGLRMNSANYSPQEMWNSGCQLVALNFQTPGY 246 (258)
T ss_pred hc-CCCccccccCHHHHHHHHHHhHHHHHHhhhcccceeCCCCCcCCCCCCCcHHHhcCCCeEEEecccCCCh
Confidence 11 2245889999999999999999999999999999999999999999999999999999999999996543
No 12
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=4.8e-102 Score=759.50 Aligned_cols=240 Identities=33% Similarity=0.543 Sum_probs=210.1
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~Tlts~i~f~dv~~aI 79 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKITFRDVIETI 79 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCCccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC--CCCCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS--ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~--~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|++...
T Consensus 80 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~e------- 152 (253)
T cd08632 80 NKYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCRD------- 152 (253)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcHH-------
Confidence 999999999999999999999999999999999999999998652 34678999999999999999985221
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
+++|+.++.+..+.++.+.
T Consensus 153 ------------------------------------------------------------ls~l~~~~~~~~~~~~~~~- 171 (253)
T cd08632 153 ------------------------------------------------------------LSDLVVYTNSVAAQDIVDD- 171 (253)
T ss_pred ------------------------------------------------------------HHhhhhhccCcccccchhc-
Confidence 2222222222211111110
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+-|
T Consensus 172 ---~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RvYP~g~RidSSNy~P~~~W~~G~QmVAlN~Qt~d~~ 242 (253)
T cd08632 172 ---GSTGNVLSFSETRAHQLVQQKAEQFMTYNQKQLTRIYPSAYRIDSSNFNPLPYWNVGCQLVALNYQSEGRM 242 (253)
T ss_pred ---CCcccccccCHHHHHHHHHHhHHHHHHHhhhccceeCCCCCcCcCCCCCcHHHhcCCCeEEEecccCCChh
Confidence 11257899999999999999999999999999999999999999999999999999999999999965443
No 13
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=9.1e-102 Score=764.32 Aligned_cols=243 Identities=35% Similarity=0.540 Sum_probs=213.3
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++|||||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999995 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhh
Q 008582 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLE 260 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (561)
|++|||++|+||||||||||| +.+||++||+||+++|||+|+.++.+. ...||||++||||||||+|+.+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~---- 156 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYE---- 156 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeecccc----
Confidence 999999999999999999999 799999999999999999999977432 3789999999999999999731
Q ss_pred hHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCC
Q 008582 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (561)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (561)
++++|+.|+.+..+.+
T Consensus 157 ----------------------------------------------------------------els~lv~y~~~~kf~~ 172 (261)
T cd08624 157 ----------------------------------------------------------------EMSSLVNYIQPTKFVS 172 (261)
T ss_pred ----------------------------------------------------------------cchhhhcccCCcCCCC
Confidence 1334444443333333
Q ss_pred cccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
|....... ..++++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-|
T Consensus 173 f~~~~~~~-~~~~~~S~sE~k~~~l~~~~~~~fv~~N~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~D~~ 250 (261)
T cd08624 173 FEFSAQKN-RSYVISSFTELKAYDLLSKASVQFVEYNKRQMSRIYPKGTRMDSSNYMPQMFWNVGCQMVALNFQTMDLP 250 (261)
T ss_pred cccccccC-CcceeecccHHHHHHHHHHhHHHHHHhchhheeeeCCCCCcccCcCCCchHHhcCCCeEEEecccCCChh
Confidence 43322211 2356899999999999999999999999999999999999999999999999999999999999965543
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=8.8e-102 Score=762.84 Aligned_cols=243 Identities=35% Similarity=0.543 Sum_probs=216.7
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~ep~v~HG~tlt~~i~f~~v~~~I 79 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGAD-NEPVVYHGYTLTSKILFKEVITTV 79 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEecCCCcccccCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k---------- 149 (257)
T cd08595 80 EKYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc----------
Confidence 99999999999999999999999999999999999999999976443 479999999999999999872
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
++++|++|+.|..+..+.++....
T Consensus 150 --------------------------------------------------------i~~els~L~~y~~~~~~~~~~~~~ 173 (257)
T cd08595 150 --------------------------------------------------------IAKALSDLVIYTKSEKFCSFTHSR 173 (257)
T ss_pred --------------------------------------------------------cChhHHHHhhhcCCcCCCCccccc
Confidence 013566776665544333443322
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.. ...++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-
T Consensus 174 ~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~n~r~l~RvYP~GtRidSSNynP~~~W~~G~QmVALN~Qt~d~ 245 (257)
T cd08595 174 DN-QHSYENNSIGENKARKLLKSSGADFVGHTQRFITRIYPKGTRASSSNYNPQEFWNVGCQMVALNFQTLGA 245 (257)
T ss_pred cc-cccceecccCHHHHHHHHHHhHHHHHHHhhcCCceeCcCCCCCCCCCCCcHHHHcCCCeEEEecccCCCh
Confidence 11 1246789999999999999999999999999999999999999999999999999999999999996543
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=1.6e-101 Score=761.45 Aligned_cols=243 Identities=34% Similarity=0.580 Sum_probs=218.9
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||||||++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~-~eP~V~HG~tlts~i~f~~v~~~I 79 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPN-GEPIVYHGHTFTSKILFKDVVAAV 79 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCcccCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC--CCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC--LKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~--~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+|+.++.+. ...||||++||||||||+|+++
T Consensus 80 k~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~~--------- 150 (258)
T cd08631 80 AQYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKIR--------- 150 (258)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeecccc---------
Confidence 99999999999999999999999999999999999999999977542 4799999999999999999741
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
++++|++|+.|..+..+.++...-
T Consensus 151 --------------------------------------------------------~~~eLs~L~~y~~~~~f~~~~~~~ 174 (258)
T cd08631 151 --------------------------------------------------------LSPELSDCVIYCKSVSFRSFTHSR 174 (258)
T ss_pred --------------------------------------------------------ccHHHHHhHhhhcccccCCccccc
Confidence 135677887776665554444221
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
. ....++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+
T Consensus 175 ~-~~~~~~~~SlsE~~~~~l~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d 245 (258)
T cd08631 175 E-HYHFYEISSFTETKARKLIREAGNEFVQHNTWQLSRVYPSGLRTDSSNYNPQEMWNAGCQMVALNFQTAG 245 (258)
T ss_pred c-cCccceecccCHHHHHHHHHhchHHHHHHHHhcCceeCcCCCCCCCCCCCcHHHHhCCCeEeeecccCCC
Confidence 1 1123678999999999999999999999999999999999999999999999999999999999999544
No 16
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=1.9e-101 Score=759.36 Aligned_cols=237 Identities=35% Similarity=0.564 Sum_probs=212.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
.|||++|||||||||||||||+||||.|+||+|||++||++||||||||||||++ +||||+|||||||+|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~-~eP~V~HG~tlts~i~f~dv~~~I 79 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDD-GMPIIYHGHTLTTKIPFKDVVEAI 79 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC---C--CCCCCCChhhccCcEEEecCCCCchhhhH
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS---E--CLKEFPSPESLKRRIIISTKPPKEYLEAK 262 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~---~--~~~~lPSP~~Lk~KIlik~K~~~~~~~~~ 262 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+||.++. + ....||||++||||||||+|++
T Consensus 80 ~~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~------- 152 (254)
T cd08596 80 NRSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKA------- 152 (254)
T ss_pred HHHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCc-------
Confidence 999999999999999999999999999999999999999998652 1 2468999999999999999873
Q ss_pred hhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcc
Q 008582 263 EEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLK 342 (561)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 342 (561)
+++++|+.|..+..+.++.
T Consensus 153 -------------------------------------------------------------~els~l~~y~~~~k~~~~~ 171 (254)
T cd08596 153 -------------------------------------------------------------PELSDLVIYCQAVKFPGLS 171 (254)
T ss_pred -------------------------------------------------------------HHHHHHHHHhcCccCCCCC
Confidence 2345555543333233333
Q ss_pred cccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 343 ECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 343 ~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.+..++++||+|+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+-
T Consensus 172 -----~~~~~~~~S~sE~~~~~~~~~~~~~lv~~n~~~l~RiYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 242 (254)
T cd08596 172 -----TPKCYHISSLNENAAKRLCRRYPQKLVQHTRCQLLRTYPAATRIDSSNPNPLIFWLHGLQLVALNYQTDDL 242 (254)
T ss_pred -----ccccceecccCHHHHHHHHHHCHHHHHHhhhhcceeeccCCCcCCCCCCCcHHHHhCCCeEEeecccCCCh
Confidence 13457899999999999999999999999999999999999999999999999999999999999995443
No 17
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=5.4e-101 Score=757.25 Aligned_cols=240 Identities=35% Similarity=0.547 Sum_probs=207.2
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+ +++||+|+||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999996 2468999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-----CCCCCChhhccCcEEEecCCCCchhhh
Q 008582 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-----LKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-----~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
|++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+. ...||||++||||||||+|+..+
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls~---- 156 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLSS---- 156 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchhh----
Confidence 999999999999999999999999999999999999999999976432 46899999999999999997311
Q ss_pred HhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCc
Q 008582 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (561)
|++|..+..+.++
T Consensus 157 -------------------------------------------------------------------L~~y~~~~~~~~~ 169 (257)
T cd08626 157 -------------------------------------------------------------------LVNYAQPVKFQGF 169 (257)
T ss_pred -------------------------------------------------------------------hhcccccCCCCCc
Confidence 0000000000111
Q ss_pred ccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+-|
T Consensus 170 ~~~~~~-~~~~~~~S~sE~k~~~~~~~~~~~~v~~n~~~l~RiYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d~~ 246 (257)
T cd08626 170 DVAEER-NIHFNMSSFNESVGLGYLKTSAIEFVNYNKRQMSRIYPKGTRVDSSNYMPQIFWNAGCQMVSLNFQTPDLG 246 (257)
T ss_pred Cchhhc-CCCccccccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCCCcCCCCCcHHHhcCCCeEEEecccCCChh
Confidence 111100 11357899999999999999999999999999999999999999999999999999999999999965433
No 18
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.1e-100 Score=755.55 Aligned_cols=238 Identities=34% Similarity=0.530 Sum_probs=208.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC-CCCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~Tlts~i~f~dvi~a 186 (561)
.|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++||||+||||||++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999974 368999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhh
Q 008582 187 IKEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLE 260 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (561)
|++|||++|+||||||||||| +++||.+||+||+++|||+||+++.+ ....||||++||||||||+|+..
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs---- 156 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMS---- 156 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchh----
Confidence 999999999999999999999 59999999999999999999997643 24689999999999999998731
Q ss_pred hHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCC
Q 008582 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (561)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (561)
+|++|+.+..+.+
T Consensus 157 -------------------------------------------------------------------~Lv~y~~~v~f~~ 169 (258)
T cd08623 157 -------------------------------------------------------------------NLVNYIQPVKFES 169 (258)
T ss_pred -------------------------------------------------------------------cccccccCcccCC
Confidence 1222222222222
Q ss_pred cccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 341 LKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
|...... ...++++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||++||++||||||||||+.+
T Consensus 170 f~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNy~P~~~W~~G~QmVALN~QT~d 245 (258)
T cd08623 170 FEASKKR-NKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVD 245 (258)
T ss_pred ccccccc-CCCccccCccHHHHHHHHHhCHHHHHHHhhhhceeeccCCCcccCCCCCChhhhcCCceEEEeecCCCC
Confidence 2221111 123578999999999999999999999999999999999999999999999999999999999999644
No 19
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=1.8e-100 Score=753.50 Aligned_cols=238 Identities=37% Similarity=0.564 Sum_probs=207.4
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCC-CCceEEeCCcccccchHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKK-DNVDVLHGGTMTAPVELIKCLRS 186 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~-~~piv~HG~Tlts~i~f~dvi~a 186 (561)
||||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||+++ +||+||||||||++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999853 68999999999999999999999
Q ss_pred HhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhh
Q 008582 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
|++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|+..+
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~---- 156 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSS---- 156 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchh----
Confidence 99999999999999999999999999999999999999999997643 236899999999999999998311
Q ss_pred HhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCc
Q 008582 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (561)
|++|..+..+.++
T Consensus 157 -------------------------------------------------------------------L~~y~~~~~f~~~ 169 (257)
T cd08591 157 -------------------------------------------------------------------LVNYIQPVKFQGF 169 (257)
T ss_pred -------------------------------------------------------------------hhccccCCCCCCc
Confidence 0111000000111
Q ss_pred ccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
...... ...++++||||+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+
T Consensus 170 ~~~~~~-~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d 244 (257)
T cd08591 170 EVAEKR-NKHYEMSSFNESKGLGYLKKSPIEFVNYNKRQLSRIYPKGTRVDSSNYMPQIFWNAGCQMVALNFQTPD 244 (257)
T ss_pred cchhhc-CCcceecccCHHHHHHHHHHHHHHHHHHhhhcCceeCcCCCcCcCCCCCcHHHhcCCCeEEEecCcCCC
Confidence 111111 123578999999999999999999999999999999999999999999999999999999999999544
No 20
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=3.2e-100 Score=755.10 Aligned_cols=243 Identities=37% Similarity=0.593 Sum_probs=219.3
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||||+||||||++|+|+|||+||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~t~~i~f~~v~~~I 79 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPD-GEPIIYHGHTLTSKILFKDVIQAI 79 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCccccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+|+.++. +....||||++||||||||+|+++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~---------- 149 (257)
T cd08593 80 REYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK---------- 149 (257)
T ss_pred HHHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc----------
Confidence 999999999999999999999999999999999999999999764 335789999999999999999741
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
+.+++++|+.|..+..+.++.+...
T Consensus 150 -------------------------------------------------------i~~els~L~~~~~~~k~~~~~~~~~ 174 (257)
T cd08593 150 -------------------------------------------------------LAKELSDLVIYCKSVHFKSFEHSKE 174 (257)
T ss_pred -------------------------------------------------------ccHHHHhhhhhcccccCCChhhhcc
Confidence 1356777776655444455544332
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
.....+++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+.+
T Consensus 175 -~~~~~~~~SlsE~k~~~~~~~~~~~lv~~n~~~l~RvYP~g~RidSSNynP~~~W~~G~QmVALN~Qt~D 244 (257)
T cd08593 175 -NYHFYEMSSFSESKALKLAQESGNEFVRHNKRQLSRIYPAGLRTDSSNYDPQEMWNVGCQIVALNFQTPG 244 (257)
T ss_pred -cCCCceeecCCHHHHHHHHHHhHHHHHHhhhhccceeCCCCCcCCCCCCCcHHHHhCCCeEeeecccCCC
Confidence 2345689999999999999999999999999999999999999999999999999999999999999644
No 21
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=3.6e-100 Score=756.14 Aligned_cols=239 Identities=34% Similarity=0.514 Sum_probs=209.4
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCC-CCCceEEeCCcccccchHHHHHHHH
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSK-KDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~-~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||++ ++||+|+||||||++|+|+|||+||
T Consensus 2 ~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~I 81 (258)
T cd08625 2 DDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEAI 81 (258)
T ss_pred CccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999953 4689999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhccccCCCCC-----CCCCCCChhhccCcEEEecCCCCchhhh
Q 008582 188 KEYAFVASEYPVVITLEDHL-TPDLQAKVAEMVTQTLGEILFTPGSE-----CLKEFPSPESLKRRIIISTKPPKEYLEA 261 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~~~-----~~~~lPSP~~Lk~KIlik~K~~~~~~~~ 261 (561)
++|||++|+||||||||||| |.+||++||++|++||||+|++++.+ +...||||++||||||||+|+..
T Consensus 82 ~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklS----- 156 (258)
T cd08625 82 AESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMS----- 156 (258)
T ss_pred HHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeecc-----
Confidence 99999999999999999999 69999999999999999999997643 24689999999999999999741
Q ss_pred HhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCc
Q 008582 262 KEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGL 341 (561)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 341 (561)
+|++|+.+..+.++
T Consensus 157 ------------------------------------------------------------------dLvvy~~~vkf~~f 170 (258)
T cd08625 157 ------------------------------------------------------------------TLVNYIEPVKFKSF 170 (258)
T ss_pred ------------------------------------------------------------------cccceecccccCCc
Confidence 11122222222222
Q ss_pred ccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 342 KECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 342 ~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
.+.... ...++|+||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++||||||||||+.+-|
T Consensus 171 ~~~~~~-~~~~~~~S~sE~k~~~l~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNydP~~~W~~G~QmVALN~QT~D~~ 247 (258)
T cd08625 171 EAAAKR-NKFFEMSSFVETKAMEQLTKSPMEFVEYNKKQLSRIYPKGTRVDSSNYMPQLFWNVGCQMVALNFQTLDLA 247 (258)
T ss_pred hhhhcc-CCcceecCccHHHHHHHHHhCHHHHHHhhhcceeeeccCCCcCcCCCCCChhHhcCcceEEEeecCCCCcc
Confidence 222111 12457899999999999999999999999999999999999999999999999999999999999975544
No 22
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=1.1e-99 Score=747.79 Aligned_cols=242 Identities=36% Similarity=0.605 Sum_probs=216.4
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
.|||++||+||||||||||||+|+||.|+||+|+|++||++||||||||||||++ +||+|+||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~eP~V~HG~t~ts~i~f~dv~~~I 79 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPD-GKPIIYHGWTRTTKIKFDDVVQAI 79 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCC-CCeEEeeCCCccCCcCHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|+.
T Consensus 80 ~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~----------- 148 (254)
T cd08628 80 KDHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKL----------- 148 (254)
T ss_pred HHHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCc-----------
Confidence 999999999999999999999999999999999999999998664 44679999999999999999873
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
+++||++|+.|+.+..+. +. .+.
T Consensus 149 -------------------------------------------------------~~~eLs~l~~y~~~~~~~-~~-~~~ 171 (254)
T cd08628 149 -------------------------------------------------------IAIELSDLVVYCKPTSKT-KD-NLE 171 (254)
T ss_pred -------------------------------------------------------CCHHHHhhHhhhcccccc-cC-Ccc
Confidence 135677887776543321 11 111
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
.+...+++||+|+++.+++++.+.+|++||++||+||||+|+|||||||||++||++||||||||||+.+-+
T Consensus 172 -~~~~~~~~S~sE~k~~~~~~~~~~~~v~~N~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~QT~d~~ 243 (254)
T cd08628 172 -NPDFKEIRSFVETKAPSIIRQKPVQLLKYNRKGLTRVYPKGQRVDSSNYDPFRLWLCGSQMVALNFQTADKY 243 (254)
T ss_pred -cccccccccccHHHHHHHHHhHHHHHHHHhHhhhhhhCCCCCcCCCCCCCchHHhcCCCeEEEeeccCCChh
Confidence 123457899999999999999999999999999999999999999999999999999999999999975544
No 23
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=2.1e-99 Score=732.46 Aligned_cols=213 Identities=40% Similarity=0.650 Sum_probs=202.0
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++||+||||||||||||+||||.|+||+|||++||++||||||||||||++ +||||||||||||+|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~-~ePvV~HG~tlts~i~f~dv~~aI 79 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPD-GEPVVHHGYTLTSKILFRDVIETI 79 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCcccCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccCcEEEecCCCCchhhhHhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKRRIIISTKPPKEYLEAKEEK 265 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~ 265 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+|++++ .+....||||++||||||||+|+
T Consensus 80 ~~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~----------- 148 (227)
T cd08594 80 NKYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK----------- 148 (227)
T ss_pred HHhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc-----------
Confidence 99999999999999999999999999999999999999999864 33468999999999999999752
Q ss_pred hhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccc
Q 008582 266 EKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECL 345 (561)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 345 (561)
T Consensus 149 -------------------------------------------------------------------------------- 148 (227)
T cd08594 149 -------------------------------------------------------------------------------- 148 (227)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 346 KVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 346 ~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
++++||+|+++.+++++.+.+|++||++||+||||+|+|+|||||||++||++||||||||||+.+-
T Consensus 149 ------~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RiYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d~ 215 (227)
T cd08594 149 ------WQVSSFSETRAHQIVQQKAAQFLRFNQRQLSRIYPSAYRIDSSNFNPQPYWNAGCQLVALNYQTEGR 215 (227)
T ss_pred ------ceeccccHHHHHHHHHHHHHHHHHhcccccceeCCCCCcCcCCCCCchHHhcCCceEEEecccCCCh
Confidence 2568999999999999999999999999999999999999999999999999999999999996553
No 24
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=3.3e-97 Score=734.73 Aligned_cols=246 Identities=35% Similarity=0.576 Sum_probs=220.6
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~-gepvV~Hg~tlts~i~f~dv~~~I 79 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPN-GEPVIYHGHTLTSKISFRSVIEAI 79 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCC-CCEEEEeCCccccceEHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCC-CCCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGS-ECLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~-~~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++. +....||||++||||||||+|+++.
T Consensus 80 ~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~~--------- 150 (260)
T cd08597 80 NEYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLKR--------- 150 (260)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCCc---------
Confidence 999999999999999999999999999999999999999999774 4567899999999999999998521
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
.+++++|++|+.|..+..+.++.....
T Consensus 151 -----------------------------------------------------~~~~~els~l~~~~~~~~~~~~~~~~~ 177 (260)
T cd08597 151 -----------------------------------------------------RKLCKELSDLVSLCKSVRFQDFPTSAQ 177 (260)
T ss_pred -----------------------------------------------------ccccHHHHhhhhhhcCcccCCcccccc
Confidence 012467888888765544444443211
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
....++++||||+++.+++++++.+|++||++||+||||+|+|||||||||+.||++||||||||||+-+
T Consensus 178 -~~~~~~~~S~sE~~~~~~~~~~~~~~v~~n~~~l~RvYP~G~RvdSSNynP~~~W~~G~QmVALN~Qt~d 247 (260)
T cd08597 178 -NQKYWEVCSFSENLARRLANEFPEDFVNYNKKFLSRVYPSPMRVDSSNYNPQDFWNCGCQIVAMNYQTPG 247 (260)
T ss_pred -ccCcccccccCHHHHHHHHHHCHHHHHHHhhhcCceeCcCCCCCCCCCCCchHHhcCCCeEeeecccCCC
Confidence 2234678999999999999999999999999999999999999999999999999999999999999543
No 25
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=5.9e-97 Score=715.15 Aligned_cols=215 Identities=40% Similarity=0.675 Sum_probs=198.8
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
|||++|||||||||||||||+||||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||+
T Consensus 2 ~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~d-gePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 2 EEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred ccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCceEHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999987 5799999999999999999999999
Q ss_pred hhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhHhhhhh
Q 008582 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKEK 267 (561)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~~ 267 (561)
+|||++|+||||||||||||.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|+..
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~----------- 149 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLY----------- 149 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEeccccc-----------
Confidence 999999999999999999999999999999999999999997644 46789999999999999998720
Q ss_pred hccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCccccccc
Q 008582 268 ENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLKV 347 (561)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 347 (561)
+
T Consensus 150 --------------------------------------------------------~----------------------- 150 (229)
T cd08627 150 --------------------------------------------------------R----------------------- 150 (229)
T ss_pred --------------------------------------------------------c-----------------------
Confidence 0
Q ss_pred CCCceeeeecCHHHHHHHHh-hcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 348 DPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 348 ~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
.++||+|+++.++++ ..+.+|++||++||+||||+|+|+|||||||+.||++||||||||||+.+-+
T Consensus 151 -----~~~S~~E~ka~~~~~~~~~~~fv~~n~~~l~RiYP~G~RidSSNy~P~~~W~~G~QmVALN~Qt~d~~ 218 (229)
T cd08627 151 -----DMSSFPETKAEKYVNRSKGKKFLQYNRRQLSRIYPKGQRLDSSNYDPLPMWICGSQLVALNFQTPDKP 218 (229)
T ss_pred -----ccCCcChHHHHHHHHhhhHHHHHHhcccceeEeCCCCCcCcCCCCCchhHhccCcEEEEeeccCCCcc
Confidence 135788888888875 3568899999999999999999999999999999999999999999965543
No 26
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=1.1e-96 Score=716.32 Aligned_cols=213 Identities=43% Similarity=0.709 Sum_probs=202.7
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++|||||||||||||||+||||.|+||+|+|++||++||||||||||||++ +||+|+||+|+|++|+|+|||+||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~-~eP~v~HG~t~ts~i~f~dv~~~I 79 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPD-GEPVVYHGHTLTSKILFKDVIEAI 79 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCeEEeeCCCCccceEHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 589999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
|+|||++|+|||||||||||+.+||.+||++|+++|||+||.++.+. ...||||++||||||||+|+
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~------------ 147 (226)
T cd08558 80 KEYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK------------ 147 (226)
T ss_pred HHHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC------------
Confidence 99999999999999999999999999999999999999999987654 38999999999999999752
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
T Consensus 148 -------------------------------------------------------------------------------- 147 (226)
T cd08558 148 -------------------------------------------------------------------------------- 147 (226)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPH 418 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~ 418 (561)
.+++||+|+++.+++++++.+|++||++||+||||+|+|||||||||++||++||||||||||+.+-
T Consensus 148 -----~~~~S~sE~~~~~~~~~~~~~l~~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d~ 214 (226)
T cd08558 148 -----YHMSSFSETKALKLLKESPEEFVKYNKRQLSRVYPKGTRVDSSNYNPQPFWNAGCQMVALNYQTPDL 214 (226)
T ss_pred -----ceEeecCHHHHHHHHHHChHHHHHhcccceeEECcCCCcCCCCCCCcHHHHhCCCeEeeecccCCCh
Confidence 2568999999999999999999999999999999999999999999999999999999999996543
No 27
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=2.4e-96 Score=715.95 Aligned_cols=217 Identities=39% Similarity=0.667 Sum_probs=202.9
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
.|||++||+||||||||||||+||||.|+||+|+|++||++||||||||||||++ ++|+|+||||+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~-~ep~V~HG~t~ts~i~f~dv~~~I 79 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDD-GEPVVTHGYTLTSSVPFRDVCRAI 79 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCC-CCcEEeeCCCCcCceEHHHHHHHH
Confidence 4899999999999999999999999999999999999999999999999999975 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+|||||||||||+.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|+. .
T Consensus 80 k~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~~-----~----- 149 (231)
T cd08598 80 KKYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKKE-----S----- 149 (231)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEeccc-----C-----
Confidence 9999999999999999999999999999999999999999998753 3578999999999999999860 0
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
+
T Consensus 150 ---------------------------------------------------------~---------------------- 150 (231)
T cd08598 150 ---------------------------------------------------------K---------------------- 150 (231)
T ss_pred ---------------------------------------------------------C----------------------
Confidence 0
Q ss_pred cCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
...+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+
T Consensus 151 ---~~~~~~S~sE~~~~~l~~~~~~~lv~~n~~~l~RvYP~g~RvdSSNynP~~~W~~G~QmVALN~Qt~d 218 (231)
T cd08598 151 ---TPNHIFSLSERSLLKLLKDKRAALDKHNRRHLMRVYPSGTRISSSNFNPLPFWRAGVQMVALNWQTYD 218 (231)
T ss_pred ---CCceeeccCHHHHHHHHHHHHHHHHHHhhhceeeeCCCCCcCCCCCCCcHHHHhCCCeEEEecccCCC
Confidence 01257899999999999999999999999999999999999999999999999999999999999543
No 28
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=8e-95 Score=703.44 Aligned_cols=216 Identities=40% Similarity=0.686 Sum_probs=201.7
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
+|||++||+||||||||||||+|+||.|+||+++|++||++||||||||||||++ ++|||+||+|+|++|+|+|||+||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~d-gePvV~HG~tlts~i~f~dv~~~I 79 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPD-GMPIIYHGHTLTSKIKFMDVLKTI 79 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCEEEEeCCcCCCCcCHHHHHHHH
Confidence 5899999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||++|+||||||||||||.+||.+||+||+++|||+||.++.+ ....||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~----------- 148 (229)
T cd08592 80 KEHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL----------- 148 (229)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC-----------
Confidence 9999999999999999999999999999999999999999987643 4678999999999999999761
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
T Consensus 149 -------------------------------------------------------------------------------- 148 (229)
T cd08592 149 -------------------------------------------------------------------------------- 148 (229)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeecCHHHHHHHH-hhcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCC
Q 008582 347 VDPDKVRRLSLSEQQLENAV-GTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHN 419 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~-~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~G 419 (561)
..+++||+|+++.+++ ++++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+-+-|
T Consensus 149 ----~~~~~S~~E~~~~~~~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVAlN~Qt~d~~ 218 (229)
T cd08592 149 ----FYEMSSFPETKAEKYLNRQKGKIFLKYNRRQLSRVYPKGQRVDSSNYDPVPMWNCGSQMVALNFQTPDKP 218 (229)
T ss_pred ----cccccCCcHHHHHHHHHHhhHHHHHHhhhhcceeeCCCCCcCcCCCCCchHHhcCCceEEEeeccCCChh
Confidence 0135689999999998 48899999999999999999999999999999999999999999999965433
No 29
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=9.1e-94 Score=697.57 Aligned_cols=213 Identities=61% Similarity=1.032 Sum_probs=201.2
Q ss_pred cCCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSI 187 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI 187 (561)
||||++||+||||+|||||||+|+||.|+||+++|++||++||||||||||||++ ++|+|+||+|+|++|+|+|||++|
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~-~ep~V~HG~t~ts~i~f~dvl~~I 79 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGR-GDICVLHGGTLTKPVKFEDCIKAI 79 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCC-CCeEEEeCCCCcCCcCHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999976 579999999999999999999999
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCC-CCCCCChhhccCcEEEecCCCCchhhhHhhhh
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSEC-LKEFPSPESLKRRIIISTKPPKEYLEAKEEKE 266 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~-~~~lPSP~~Lk~KIlik~K~~~~~~~~~~~~~ 266 (561)
++|||.+|+|||||||||||+.+||.+||++|+++|||+||.|+.+. ...||||++||||||||+|++
T Consensus 80 ~~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~----------- 148 (228)
T cd08599 80 KENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP----------- 148 (228)
T ss_pred HHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC-----------
Confidence 99999999999999999999999999999999999999999987544 379999999999999998641
Q ss_pred hhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCCcccccc
Q 008582 267 KENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGGLKECLK 346 (561)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 346 (561)
T Consensus 149 -------------------------------------------------------------------------------- 148 (228)
T cd08599 149 -------------------------------------------------------------------------------- 148 (228)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCceeeeecCHHHHHHHHh-hcchhHHHhhccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCC
Q 008582 347 VDPDKVRRLSLSEQQLENAVG-TYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGP 417 (561)
Q Consensus 347 ~~~~~~~~~S~sE~~~~~~~~-~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~ 417 (561)
.+++||+|+++.++.+ +++.+|++||++||+||||+|+|+|||||||+.||++||||||||||+.+
T Consensus 149 -----~~~~S~sE~~~~~l~~~~~~~~~v~~n~~~l~RvYP~g~RvdSSNy~P~~~W~~G~QmVALN~Qt~d 215 (228)
T cd08599 149 -----VIRNSLSETQLKKVIEGEHPTDLIEFTQKNLLRVYPAGLRITSSNYDPMLAWMHGAQMVALNMQGYD 215 (228)
T ss_pred -----ccccCccHHHHHHHhhhhcHHHHHHHhhccceeeccCCcccCCCCCCChHHhcCcceEeeeecCCCC
Confidence 2457999999999996 88999999999999999999999999999999999999999999999533
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=5.2e-58 Score=466.02 Aligned_cols=238 Identities=24% Similarity=0.374 Sum_probs=198.0
Q ss_pred cCCCCCCccceeecccccccccCCCCC-----CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHH
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN-----SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~-----g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (561)
++||++||+||||++||||||.|+|+. |+++.++|+++|++||||+|||||+|++ ++|+|+||+|+| +++|+|
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~-~~~~v~HG~~~~-~~~f~d 78 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKP-EEPIIYHGPTFL-DIFLKE 78 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCC-CCeEEEECCccc-CcCHHH
Confidence 589999999999999999999999998 9999999999999999999999999865 579999999999 999999
Q ss_pred HHHHHhhhccccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCcEEEecCCCCchhh
Q 008582 183 CLRSIKEYAFVASEYPVVITLEDHLTP--DLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRRIIISTKPPKEYLE 260 (561)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hcs~--~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~~~~ 260 (561)
||++|+++||..++||||||||+||+. +||++||++|+++||++|+.|+......+|||++||||||||+|+......
T Consensus 79 vl~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~~~~~~~~Psl~~lrgKIll~~r~~~~~~~ 158 (274)
T cd00137 79 VIEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPPLKPTVPLPSLEDLRGKILLLNKKNGFSGP 158 (274)
T ss_pred HHHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCccccCCCCCCHHHHhhheeEEeeccCCCCC
Confidence 999999999999999999999999998 999999999999999999998765567899999999999999987521100
Q ss_pred hHhhhhhhccccCCCCCCccccccCCCCCccccCCCCCCCCCCCCCCCCCCCccccccccccchhhhccceeccccccCC
Q 008582 261 AKEEKEKENDSQRGKGSADEEAWGKEVPNLKSLNNSACDKDDFDGGVDNDEEDSDDKSQHNEAPEYRKLIAIHAGKPKGG 340 (561)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 340 (561)
. +.+. . . +. .+
T Consensus 159 ~----------------------~~~~----------------~--------~------------~~-----------~~ 169 (274)
T cd00137 159 T----------------------GSSN----------------D--------T------------GF-----------VS 169 (274)
T ss_pred c----------------------cccc----------------c--------c------------Cc-----------CC
Confidence 0 0000 0 0 00 00
Q ss_pred cccccccCCCceeeeecCHHHHHH----HHhhcchhHHHhhccceeeeeCCCCC---------CCCCCCCccccccc---
Q 008582 341 LKECLKVDPDKVRRLSLSEQQLEN----AVGTYGNDIVRFTQRNLLRIYPKGIR---------VDSSNYNPLIGWSH--- 404 (561)
Q Consensus 341 ~~~~~~~~~~~~~~~S~sE~~~~~----~~~~~~~~~~~~~~~~l~RvYP~g~R---------idSSNf~P~~~W~~--- 404 (561)
+..... .....+++|++|.++.+ +..+...+++.+|+++|+|+||+|+| ++||||+|+.+|++
T Consensus 170 ~~~~~~-~~~~~~~~sqdE~k~~~~~K~~~i~~~~~~~~~n~~~l~~nypsgtr~~~~~~~~a~~snn~~p~~~w~~~~~ 248 (274)
T cd00137 170 FEFSTQ-KNRSYNISSQDEYKAYDDEKVKLIKATVQFVDYNKNQLSRNYPSGTSGGTAWYYYAMDSNNYMPQMFWNANPA 248 (274)
T ss_pred cccccc-cCCCceEEeechhhhcchhhHHHHHhHHHHHhcCcceEEEEccCccCCCCcchhhHhhcCccChHHHhccccC
Confidence 000000 00123568888888854 34455667899999999999999999 99999999999999
Q ss_pred ccceeeeecccCC
Q 008582 405 GAQMVAFNMQTGP 417 (561)
Q Consensus 405 G~QmVALN~QnG~ 417 (561)
||||||||||+.+
T Consensus 249 g~qiValdfqt~~ 261 (274)
T cd00137 249 GCGIVILDFQTMD 261 (274)
T ss_pred CceEEEeeCcCCC
Confidence 9999999999643
No 31
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=1.4e-40 Score=303.84 Aligned_cols=134 Identities=46% Similarity=0.816 Sum_probs=128.1
Q ss_pred CCCCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
|||++||+||||++|||||++|+|+.|+++..+|+++|..||||+|||||++++ ++|+|+||+|+++.++|+||+++|+
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~ 79 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPD-GEPVIYHGHTFTLPIKLSEVLEAIK 79 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCC-CCEEEEECCcccccEEHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999876 4699999999999999999999999
Q ss_pred hhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC-CCCCCCChhh
Q 008582 189 EYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE-CLKEFPSPES 243 (561)
Q Consensus 189 ~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~-~~~~lPSP~~ 243 (561)
++||..+.+||||+||+||+.++|.+||++|+++||++|+.|+.. ....+|||++
T Consensus 80 ~fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 80 DFAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 999999999999999999999999999999999999999998854 4678999985
No 32
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=3e-37 Score=286.01 Aligned_cols=143 Identities=29% Similarity=0.567 Sum_probs=128.8
Q ss_pred CCCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhh
Q 008582 111 MTAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEY 190 (561)
Q Consensus 111 m~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~ 190 (561)
|+.|+|||||++||||||+++|+.|++....|.++|..||||++||||++++ ++|.|+||+++++.++|+||+++|+++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~-~~~~v~Hg~~~~~~~~~~dvL~~i~~f 79 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGND-GELVVYHGITSTSGITFEDVLNDIRDF 79 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETT-SSEEEEETTSEE-EEEHHHHHHHHHHH
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCC-CceEEEeCCEeeeeEeHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999765 369999999999999999999999999
Q ss_pred ccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecCC
Q 008582 191 AFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTKP 254 (561)
Q Consensus 191 AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K~ 254 (561)
+|..+.+||||++++||+.++|..+|++|+++||++|+.++.. ....+|+|++|||||||.+||
T Consensus 80 l~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 80 LFEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp TTHSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred HhcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999997754 468899999999999999875
No 33
>smart00149 PLCYc Phospholipase C, catalytic domain (part); domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.7e-34 Score=252.35 Aligned_cols=99 Identities=38% Similarity=0.574 Sum_probs=88.6
Q ss_pred hccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCccccccccc
Q 008582 327 RKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSHGA 406 (561)
Q Consensus 327 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~G~ 406 (561)
++||+|+.++++.++.......+ ..+++||+|+++.+++++++.+|++||++||+||||+|+|+|||||||+++|++||
T Consensus 1 S~Lv~y~~~~~f~~f~~~~~~~~-~~~~~S~~E~~~~~~~~~~~~~~~~~n~~~l~RvYP~g~R~dSSNy~P~~~W~~G~ 79 (115)
T smart00149 1 SDLVIYCAPVKFRSFESAESKDP-FYEMSSFSETKAKKLLKKAPTDFVRYNQRQLSRVYPKGTRVDSSNYNPQVFWNAGC 79 (115)
T ss_pred CCEeeEecCCCCCCccchhhcCC-CceecccCHHHHHHHHHHhHHHHHHhccccceEECcCCCcCCCCCCCCHHHHcCCc
Confidence 47889988887777766554322 46899999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeecc---------------cCCCCcccCCCC
Q 008582 407 QMVAFNMQ---------------TGPHNEVFDPKV 426 (561)
Q Consensus 407 QmVALN~Q---------------nG~~Gyvl~P~~ 426 (561)
|||||||| ||+|||||||..
T Consensus 80 QmVAlN~Qt~d~~m~lN~g~F~~NG~cGYVLKP~~ 114 (115)
T smart00149 80 QMVALNFQTPDKPMQLNQGMFRANGGCGYVLKPDF 114 (115)
T ss_pred eEeEeecCCCChHHHHHhhHhhcCCCCCeEeCCCC
Confidence 99999999 899999999963
No 34
>PF00387 PI-PLC-Y: Phosphatidylinositol-specific phospholipase C, Y domain This entry is for the whole phospholipase C protein; InterPro: IPR001711 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), an eukaryotic intracellular enzyme, plays an important role in signal transduction processes [] (see IPR001192 from INTERPRO). It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as 'X-box' (see IPR000909 from INTERPRO) and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. At the C-terminal of the Y-box, there is a C2 domain (see IPR000008 from INTERPRO) possibly involved in Ca-dependent membrane attachment.; GO: 0004435 phosphatidylinositol phospholipase C activity, 0006629 lipid metabolic process, 0007165 signal transduction, 0035556 intracellular signal transduction; PDB: 3OHM_B 2FJU_B 2ZKM_X 3QR1_D 3QR0_A 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=100.00 E-value=2.6e-34 Score=254.30 Aligned_cols=101 Identities=32% Similarity=0.516 Sum_probs=73.5
Q ss_pred hhhccceeccccccCCcccccccCCCceeeeecCHHHHHHHHhhcchhHHHhhccceeeeeCCCCCCCCCCCCccccccc
Q 008582 325 EYRKLIAIHAGKPKGGLKECLKVDPDKVRRLSLSEQQLENAVGTYGNDIVRFTQRNLLRIYPKGIRVDSSNYNPLIGWSH 404 (561)
Q Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~S~sE~~~~~~~~~~~~~~~~~~~~~l~RvYP~g~RidSSNf~P~~~W~~ 404 (561)
||++|++|+.+..+.++...-.. ....+++||||+++.+++++++.+|++||++||+||||+|+|+|||||||++||++
T Consensus 1 ELSdLvvY~~s~~f~~~~~~~~~-~~~~~~~S~sE~~~~~l~~~~~~~l~~~~~~~l~RvyP~~~R~~SsN~~P~~~W~~ 79 (118)
T PF00387_consen 1 ELSDLVVYCRSVKFKSFEDSERK-KQPWHMSSFSESKAKKLVKEHPSELVEHNKRHLVRVYPSGTRIDSSNFNPLPFWNC 79 (118)
T ss_dssp HHHTTESSCEEE----HHHHHHH-TSTTEEEEEEHHHHHHHHHHCHHHHHHHHHHSEEEEE--TT-TT-----THHHHTT
T ss_pred ChhhhheeeccccCCCcCChhhc-CCccEEEeccHHHHHHHHHHccchHHHhcccceEEecCCccccCCCCCChHHHhhc
Confidence 68999998877766555432221 22578999999999999999999999999999999999999999999999999999
Q ss_pred ccceeeeecc---------------cCCCCcccCCCC
Q 008582 405 GAQMVAFNMQ---------------TGPHNEVFDPKV 426 (561)
Q Consensus 405 G~QmVALN~Q---------------nG~~Gyvl~P~~ 426 (561)
|||||||||| ||+|||||||..
T Consensus 80 G~Q~vALN~Qt~d~~m~ln~g~F~~NG~cGYVLKP~~ 116 (118)
T PF00387_consen 80 GCQMVALNFQTPDEPMQLNQGMFRQNGGCGYVLKPEY 116 (118)
T ss_dssp T-SEEEB-TTS-SHHHHHHHHHTTTGGG-SEEE--GG
T ss_pred cCccceeeccCCChhHHHHHhhhccCCCCCeEeCchh
Confidence 9999999999 899999999964
No 35
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.86 E-value=1.1e-21 Score=200.95 Aligned_cols=146 Identities=25% Similarity=0.433 Sum_probs=127.7
Q ss_pred CCCCCCccceeecccccccccC------------CCC--CCCCChHHHHHHHhCCCcEEEEEeeCCCC------------
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTG------------NQL--NSDCSDVPIIRALQKGVRVIELDIWPNSK------------ 162 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g------------~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~------------ 162 (561)
.+.+.||+||++-.|||+|..| +|+ ....+-.....+|..|+|.+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 3567899999999999999998 777 34455667889999999999999996443
Q ss_pred -------CCCceEEeCCcc---cccchHHHHHHHHhhhccc-cCCCceEEEeccCCCH------------HHHHHHHHHH
Q 008582 163 -------KDNVDVLHGGTM---TAPVELIKCLRSIKEYAFV-ASEYPVVITLEDHLTP------------DLQAKVAEMV 219 (561)
Q Consensus 163 -------~~~piv~HG~Tl---ts~i~f~dvi~aI~~~AF~-~S~yPvIlSlE~Hcs~------------~qQ~~ma~~l 219 (561)
+++.-|+|+.++ |+..+|.+|++.||+++|. .++|||+|.||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 345789999998 8999999999999999998 8999999999999987 7899999999
Q ss_pred HHHhhc-cccCCCC-----CCC------CCCCChhhccCcEEEecCC
Q 008582 220 TQTLGE-ILFTPGS-----ECL------KEFPSPESLKRRIIISTKP 254 (561)
Q Consensus 220 ~~i~Gd-~L~~~~~-----~~~------~~lPSP~~Lk~KIlik~K~ 254 (561)
+++||+ +||+|+. ..+ ..+|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPddvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPDDVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCccccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 9999874 222 6899999999999999875
No 36
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC). PLCs are involved in the hydrolysis of phosphatidylinositol-4,5-bisphosphate (PIP2) to d-myo-inositol-1,4,5-trisphosphate (1,4,5-IP3) and sn-1,2-diacylglycerol (DAG). 1,4,5-IP3 and DAG are second messengers in eukaryotic signal transduction cascades. PLC is composed of a N-terminal PH domain followed by a series of EF hands, a catalytic TIM barrel and a C-terminal C2 domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking
Probab=99.81 E-value=5.1e-19 Score=159.25 Aligned_cols=125 Identities=43% Similarity=0.646 Sum_probs=108.9
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-CceeeecccCCCCC-CCccccEEEEeeecCCceEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNW-IPSWNEEFEFPLSVPELALLRIE 509 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~~k~kTkvi~nn~-nP~WNE~f~F~v~~pela~Lrf~ 509 (561)
..|+|+|++|++|+... ....+.+||||+|.+.+.+. +..+.||+++.++. ||.|||+|.|.+..++.+.|+|.
T Consensus 2 ~~l~v~vi~a~~L~~~~----~~~~~~~dpyv~v~l~~~~~~~~~~~kT~~~~~~~~~P~w~e~f~f~~~~~~~~~l~~~ 77 (128)
T cd00275 2 LTLTIKIISGQQLPKPK----GDKGSIVDPYVEVEIHGLPADDSAKFKTKVVKNNGFNPVWNETFEFDVTVPELAFLRFV 77 (128)
T ss_pred eEEEEEEEeeecCCCCC----CCCCCccCCEEEEEEEeCCCCCCCcEeeeeecCCCcCCccCCcEEEEEeCCCeEEEEEE
Confidence 47999999999997421 01245679999999988665 56778999988775 99999999999988888899999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|+|.+.. ++++||++.++++.|..||++++|++++|++..+++|+|+++++
T Consensus 78 V~d~~~~-~~~~iG~~~~~l~~l~~g~~~~~l~~~~~~~~~~~~l~v~~~~~ 128 (128)
T cd00275 78 VYDEDSG-DDDFLGQACLPLDSLRQGYRHVPLLDSKGEPLELSTLFVHIDIT 128 (128)
T ss_pred EEeCCCC-CCcEeEEEEEEhHHhcCceEEEEecCCCCCCCcceeEEEEEEEC
Confidence 9999876 79999999999999999999999999999988899999999984
No 37
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.77 E-value=1.6e-18 Score=175.59 Aligned_cols=143 Identities=22% Similarity=0.374 Sum_probs=121.1
Q ss_pred cCCCCCCccceeecccccccccCCCCC----------CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc-
Q 008582 108 HHDMTAPVSHYFIYTGHNSYLTGNQLN----------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA- 176 (561)
Q Consensus 108 ~~dm~~PLs~YfI~SSHNTYL~g~Ql~----------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts- 176 (561)
..||+.||++|+|-.|||+|..+..-. +....-.+..+|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~--~~l~v~Hg~~~~~~ 80 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT--GDLRLCHGGDHGYL 80 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC--CCEEEEccCccccc
Confidence 469999999999999999999876532 233344578999999999999999864 4689999987654
Q ss_pred ------cchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC----CCCCCCChhhcc-
Q 008582 177 ------PVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE----CLKEFPSPESLK- 245 (561)
Q Consensus 177 ------~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~----~~~~lPSP~~Lk- 245 (561)
...|++|++.|+++++....++|||.||+|++..++..+.+.|+++||++||.|+.. .....|++++++
T Consensus 81 ~~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~ 160 (267)
T cd08590 81 GVCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLN 160 (267)
T ss_pred cccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHh
Confidence 568999999999999999999999999999999888899999999999999998642 146789999996
Q ss_pred -CcEEEec
Q 008582 246 -RRIIIST 252 (561)
Q Consensus 246 -~KIlik~ 252 (561)
||.||--
T Consensus 161 ~GkrViv~ 168 (267)
T cd08590 161 SGKQVVLA 168 (267)
T ss_pred CCCEEEEE
Confidence 7776654
No 38
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.72 E-value=4.8e-17 Score=145.74 Aligned_cols=103 Identities=26% Similarity=0.379 Sum_probs=84.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccC--CCceeeecccCCCCCCCccccEEEEeeec---CCceEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 507 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p--~d~~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lr 507 (561)
+|+|+|++|++|+.. + .+.+||||+|.+.|.. ....++||+++.+++||+|||+|.|.+.. ++.+.|+
T Consensus 1 kL~V~Vi~A~~L~~~------d-~g~~DPYVkV~l~g~~~~~k~~k~kTkv~~~tlnPvwNE~f~F~v~~~~~~~~~~L~ 73 (120)
T cd08395 1 KVTVKVVAANDLKWQ------T-TGMFRPFVEVNLIGPHLSDKKRKFATKSKNNNWSPKYNETFQFILGNEDDPESYELH 73 (120)
T ss_pred CEEEEEEECcCCCcc------c-CCCCCCEEEEEEecCCCcccccEeeeEEecCCCCCccCcEEEEEeeCcCCCceeEEE
Confidence 489999999999642 2 2678999999998732 33345689999999999999999999974 3457899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~ 542 (561)
|.|+|+|..+++++||++.+||..+..+- .|.||.
T Consensus 74 ~~V~D~d~~~~dd~IG~~~l~l~~~~~~~~~~~w~~L~ 111 (120)
T cd08395 74 ICVKDYCFARDDRLVGVTVLQLRDIAQAGSCACWLPLG 111 (120)
T ss_pred EEEEEecccCCCCEEEEEEEEHHHCcCCCcEEEEEECc
Confidence 99999998778999999999999998664 466774
No 39
>cd08677 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domain
Probab=99.69 E-value=1.4e-16 Score=141.67 Aligned_cols=101 Identities=18% Similarity=0.187 Sum_probs=84.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..+.|+|+|+.|++|+. .+.+||||+|.+... ....+++|++++++.||+|||+|.|.+...++ ..|
T Consensus 11 ~~~~~L~V~vikA~~L~~---------~g~sDPYVKv~L~~~-~k~~k~kT~v~rktlnPvfnE~f~F~v~~~~l~~~tL 80 (118)
T cd08677 11 KQKAELHVNILEAENISV---------DAGCECYISGCVSVS-EGQKEAQTALKKLALHTQWEEELVFPLPEEESLDGTL 80 (118)
T ss_pred CcCCEEEEEEEEecCCCC---------CCCCCeEEEEEEcCC-cCccEEEcceecCCCCCccccEEEEeCCHHHhCCcEE
Confidence 456899999999999851 133799999999632 22357799999999999999999999876555 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCccc--CCCceEE
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSEL--KQGIRAV 539 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L--~~GyR~i 539 (561)
.|.|+|+|..+++++||++.+|++.+ ..|.+||
T Consensus 81 ~~~V~d~Drfs~~d~IG~v~l~l~~~~~~~~~~~W 115 (118)
T cd08677 81 TLTLRCCDRFSRHSTLGELRLKLADVSMMLGAAQW 115 (118)
T ss_pred EEEEEeCCCCCCCceEEEEEEccccccCCccccch
Confidence 99999999999999999999999965 7777765
No 40
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polypho
Probab=99.67 E-value=2.3e-16 Score=143.40 Aligned_cols=114 Identities=13% Similarity=0.205 Sum_probs=90.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEeeecCCc-eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPEL-ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pel-a~L 506 (561)
|.+++|+|+|+.|++|+.. .....+||||+|.+.+.+.+..|+||++++++ .||+|||+|.|++..++. ..|
T Consensus 11 p~~~rLtV~VikarnL~~~------~~~~~~dpYVKV~L~~~~k~~~KkKT~v~k~t~~~P~fNEsF~Fdv~~~~~~v~l 84 (135)
T cd08692 11 AVNSRIQLQILEAQNLPSS------STPLTLSFFVKVGMFSTGGLLYKKKTRLVKSSNGQVKWGETMIFPVTQQEHGIQF 84 (135)
T ss_pred CcCCeEEEEEEEccCCCcc------cCCCCCCcEEEEEEEECCCcceeecCccEECCCCCceecceEEEeCCchhheeEE
Confidence 6778999999999999742 12344699999999988888889999999999 479999999999976554 367
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC-CCceEE-EccCCCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK-QGIRAV-PLHDRKGER 548 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~-~GyR~i-pL~d~~G~~ 548 (561)
.+.|+|.|..+++++||++.++.++.. .|.+|+ .+++.-+++
T Consensus 85 ~v~v~d~~~~~~n~~IG~v~lG~~~~~~~~~~hW~~m~~~pr~~ 128 (135)
T cd08692 85 LIKLYSRSSVRRKHFLGQVWISSDSSSSEAVEQWKDTIANPEKV 128 (135)
T ss_pred EEEEEeCCCCcCCceEEEEEECCccCCchhhhhHHHHHhCCCCe
Confidence 788899988889999999999998743 457776 444433443
No 41
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 12, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 13, do not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycl
Probab=99.67 E-value=1.7e-16 Score=145.43 Aligned_cols=115 Identities=20% Similarity=0.215 Sum_probs=93.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|...+|+|+|+.|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~~L~V~Vi~A~nL~~~------~~~g~~DpyVkv~l~~~~~~~~k~kT~v~k~t~nP~~nE~f~F~v~~~~l~~~~l 85 (136)
T cd08406 12 PTAERLTVVVVKARNLVWD------NGKTTADPFVKVYLLQDGRKISKKKTSVKRDDTNPIFNEAMIFSVPAIVLQDLSL 85 (136)
T ss_pred CCCCEEEEEEEEeeCCCCc------cCCCCCCeEEEEEEEeCCccccccCCccccCCCCCeeceeEEEECCHHHhCCcEE
Confidence 3456899999999999642 33467899999999765544457799999999999999999999865444 679
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
+|.|+|+|..+++++||++.++..+..+|++|+ .+.+.-++++
T Consensus 86 ~~~V~~~d~~~~~~~iG~v~lg~~~~g~~~~hW~~ml~~~~~~v 129 (136)
T cd08406 86 RVTVAESTEDGKTPNVGHVIIGPAASGMGLSHWNQMLASLRKPV 129 (136)
T ss_pred EEEEEeCCCCCCCCeeEEEEECCCCCChhHHHHHHHHHCCCCee
Confidence 999999998889999999999999888898887 4555445543
No 42
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2). A single copy of the C2 domain is present in cPLA2 which releases arachidonic acid from membranes initiating the biosynthesis of potent inflammatory mediators such as prostaglandins, leukotrienes, and platelet-activating factor. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants o
Probab=99.66 E-value=9.4e-16 Score=136.88 Aligned_cols=113 Identities=29% Similarity=0.425 Sum_probs=92.2
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. +..+.+||||+|.+.+.+ ..++||+++.++.||+|||+|.|.+..+....|+|.|||+
T Consensus 2 L~V~vi~a~~L~~~------~~~~~~Dpyv~v~~~~~~--~~~~kT~vv~~t~nP~Wne~f~f~i~~~~~~~l~v~v~d~ 73 (119)
T cd04036 2 LTVRVLRATNITKG------DLLSTPDCYVELWLPTAS--DEKKRTKTIKNSINPVWNETFEFRIQSQVKNVLELTVMDE 73 (119)
T ss_pred eEEEEEEeeCCCcc------CCCCCCCcEEEEEEcCCC--CccCccceecCCCCCccceEEEEEeCcccCCEEEEEEEEC
Confidence 78999999999642 334678999999986432 3567999999999999999999998766566899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCce---EEEccCCCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGIR---AVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.. ++++||++.+|++.+..|.+ +.+|.+. +.+.|.++|++
T Consensus 74 d~~-~~~~iG~~~~~l~~l~~g~~~~~~~~L~~~-----~~g~l~~~~~~ 117 (119)
T cd04036 74 DYV-MDDHLGTVLFDVSKLKLGEKVRVTFSLNPQ-----GKEELEVEFLL 117 (119)
T ss_pred CCC-CCcccEEEEEEHHHCCCCCcEEEEEECCCC-----CCceEEEEEEe
Confidence 987 79999999999999999975 5566543 24578888876
No 43
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I. Rab GTPases recruit various effector proteins to organelles and vesicles. Rab11-family interacting proteins (FIPs) are involved in mediating the role of Rab11. FIPs can be divided into three classes: class I FIPs (Rip11a, Rip11b, RCP, and FIP2) which contain a C2 domain after N-terminus of the protein, class II FIPs (FIP3 and FIP4) which contain two EF-hands and a proline rich region, and class III FIPs (FIP1) which exhibits no homology to known protein domains. All FIP proteins contain a highly conserved, 20-amino acid motif at the C-terminus of the protein, known as Rab11/25 binding domain (RBD). Class I FIPs are thought to bind to endocytic membranes via their C2 domain, which interacts directly with phospholipids. Class II FIPs do not have any membrane binding domains leaving much to speculate about the mechanism involving FIP3 and FIP4 interactions with endocytic membranes. The member
Probab=99.66 E-value=1e-15 Score=138.13 Aligned_cols=115 Identities=23% Similarity=0.356 Sum_probs=93.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-----CCceEEEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----PELALLRI 508 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-----pela~Lrf 508 (561)
++|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+.. +....|.|
T Consensus 1 ~~V~V~~A~~L~~------~d~~g~~dpYv~v~l~~-----~~~kT~v~~~t~nP~Wne~f~F~v~~~~~~~~~~~~l~~ 69 (126)
T cd08682 1 VQVTVLQARGLLC------KGKSGTNDAYVIIQLGK-----EKYSTSVKEKTTSPVWKEECSFELPGLLSGNGNRATLQL 69 (126)
T ss_pred CEEEEEECcCCcC------CCCCcCCCceEEEEECC-----eeeeeeeecCCCCCEeCceEEEEecCcccCCCcCCEEEE
Confidence 5799999999963 13345689999999853 57799999999999999999999865 34568999
Q ss_pred EEEecCCCCCCcceEEEEEeCcccC--CC---ceEEEccCCCCCcc-cCeEEEEEEE
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRKGERY-KSVKLLMHFE 559 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~--~G---yR~ipL~d~~G~~~-~~atLlv~~~ 559 (561)
.|||++..+++++||++.+||+.+. .| .+|.+|.+..|+.- ..+.|.|+|+
T Consensus 70 ~v~d~~~~~~d~~iG~~~i~l~~l~~~~~~~~~~W~~L~~~~~~~~~~~Gei~l~~~ 126 (126)
T cd08682 70 TVMHRNLLGLDKFLGQVSIPLNDLDEDKGRRRTRWFKLESKPGKDDKERGEIEVDIQ 126 (126)
T ss_pred EEEEccccCCCceeEEEEEEHHHhhccCCCcccEEEECcCCCCCCccccceEEEEeC
Confidence 9999998888999999999999986 55 47889987766433 3468888875
No 44
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protein
Probab=99.65 E-value=3e-15 Score=133.96 Aligned_cols=116 Identities=24% Similarity=0.363 Sum_probs=95.3
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
+|+|+|++|.+|+. .+..+.+||||++.+.+ ....||+++.++.||.|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~a~~L~~------~d~~g~~Dpyv~v~~~~----~~~~kT~~~~~t~nP~Wne~f~f~v~~~~-~~l~~~v~D 69 (121)
T cd04042 1 QLDIHLKEGRNLAA------RDRGGTSDPYVKFKYGG----KTVYKSKTIYKNLNPVWDEKFTLPIEDVT-QPLYIKVFD 69 (121)
T ss_pred CeEEEEEEeeCCCC------cCCCCCCCCeEEEEECC----EEEEEeeeccCCCCCccceeEEEEecCCC-CeEEEEEEe
Confidence 48999999999963 23346689999999864 34679999999999999999999986544 579999999
Q ss_pred cCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 513 YDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 513 ~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
++..+++++||++.+++..+..|. .+++|.+.++... .++|.+.+.|
T Consensus 70 ~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~-~G~l~l~~~~ 119 (121)
T cd04042 70 YDRGLTDDFMGSAFVDLSTLELNKPTEVKLKLEDPNSDED-LGYISLVVTL 119 (121)
T ss_pred CCCCCCCcceEEEEEEHHHcCCCCCeEEEEECCCCCCccC-ceEEEEEEEE
Confidence 998888999999999999998553 5889998887443 4588888876
No 45
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip). Tollip is a part of the Interleukin-1 receptor (IL-1R) signaling pathway. Tollip is proposed to link serine/threonine kinase IRAK to IL-1Rs as well as inhibiting phosphorylation of IRAK. There is a single C2 domain present in Tollip. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice varian
Probab=99.64 E-value=3.4e-15 Score=134.05 Aligned_cols=115 Identities=18% Similarity=0.244 Sum_probs=93.8
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.|.|+|++|++++. .+ ++.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+... ...|.|.|
T Consensus 2 g~L~v~v~~Ak~l~~------~~-~g~sDPYv~i~lg~-----~~~kT~v~~~~~~nP~WNe~F~f~v~~~-~~~l~~~V 68 (121)
T cd04016 2 GRLSITVVQAKLVKN------YG-LTRMDPYCRIRVGH-----AVYETPTAYNGAKNPRWNKTIQCTLPEG-VDSIYIEI 68 (121)
T ss_pred cEEEEEEEEccCCCc------CC-CCCCCceEEEEECC-----EEEEeEEccCCCCCCccCeEEEEEecCC-CcEEEEEE
Confidence 579999999997642 23 46789999999954 5679999876 58999999999998654 35699999
Q ss_pred EecCCCCCCcceEEEEEeCc-ccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVS-ELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~-~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||+|..++|++||.+.+||. .+..|. .|.+|...+|++.. +.|.+.+.|
T Consensus 69 ~d~d~~~~dd~iG~~~i~l~~~~~~g~~~~~W~~L~~~~~~~~~-g~i~l~l~y 121 (121)
T cd04016 69 FDERAFTMDERIAWTHITIPESVFNGETLDDWYSLSGKQGEDKE-GMINLVFSY 121 (121)
T ss_pred EeCCCCcCCceEEEEEEECchhccCCCCccccEeCcCccCCCCc-eEEEEEEeC
Confidence 99999899999999999995 687774 58899888888755 478777764
No 46
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.64 E-value=4.7e-16 Score=157.93 Aligned_cols=144 Identities=22% Similarity=0.293 Sum_probs=125.1
Q ss_pred CCCCCccceeecccccccccCCCCC-------CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHH
Q 008582 110 DMTAPVSHYFIYTGHNSYLTGNQLN-------SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (561)
Q Consensus 110 dm~~PLs~YfI~SSHNTYL~g~Ql~-------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (561)
+.+.||+++.|-.|||+|..+.... +.+.-..+...|..|+|++|||||...+++++.|+||.......+|.|
T Consensus 4 ~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~~ 83 (271)
T cd08557 4 LDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLED 83 (271)
T ss_pred cccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHHH
Confidence 5788999999999999998877642 334444678999999999999999865446799999988887899999
Q ss_pred HHHHHhhhccccCCCceEEEeccCCCHHH---HHHHHHHHHHHhhccccCCCCCCCCCCCChhhcc-CcEEEecCC
Q 008582 183 CLRSIKEYAFVASEYPVVITLEDHLTPDL---QAKVAEMVTQTLGEILFTPGSECLKEFPSPESLK-RRIIISTKP 254 (561)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hcs~~q---Q~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk-~KIlik~K~ 254 (561)
|++.|+++.......+|||.||.+++... +..++++|+++||+.++.+. ......|++++|+ ||+||-...
T Consensus 84 vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~ptL~el~~gK~vi~~~~ 158 (271)
T cd08557 84 VLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP-VRAGGWPTLGELRAGKRVLLFYF 158 (271)
T ss_pred HHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc-cccCCCCcHHHHhcCCeEEEEEC
Confidence 99999999999989999999999998875 89999999999999999875 3346789999999 999998655
No 47
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 13, a member of class 6 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmins 8 and 12, does not have any consensus Ca2+ binding sites. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recy
Probab=99.63 E-value=8.9e-16 Score=140.87 Aligned_cols=117 Identities=21% Similarity=0.207 Sum_probs=91.7
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
|..++|+|+|+.|++|+.. +.+....+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~~L~V~V~karnL~~~----d~~~~~~~DpYVKv~l~~~~~k~~kkkT~v~k~t~nPvfNE~f~F~v~~~~L~~~~L 87 (138)
T cd08407 12 PAANRLLVVVIKAKNLHSD----QLKLLLGIDVSVKVTLKHQNAKLKKKQTKRAKHKINPVWNEMIMFELPSELLAASSV 87 (138)
T ss_pred CCCCeEEEEEEEecCCCcc----ccCCCCCCCeEEEEEEEcCCcccceeccceeeCCCCCccccEEEEECCHHHhCccEE
Confidence 4567899999999999642 1111233799999999764444457899999999999999999999876544 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
.|.|+|+|..+++++||++.+++.+..++.+|+ .+++.-++++
T Consensus 88 ~~~V~d~d~~~~~d~iG~v~lg~~~~g~~~~hW~~ml~~p~~~v 131 (138)
T cd08407 88 ELEVLNQDSPGQSLPLGRCSLGLHTSGTERQHWEEMLDNPRRQI 131 (138)
T ss_pred EEEEEeCCCCcCcceeceEEecCcCCCcHHHHHHHHHhCCCCch
Confidence 999999999999999999999999877777766 5555445543
No 48
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permut
Probab=99.63 E-value=2.7e-15 Score=134.90 Aligned_cols=97 Identities=27% Similarity=0.370 Sum_probs=82.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ec--CCceEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SV--PELALLRI 508 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~--pela~Lrf 508 (561)
..|.|+|+.|.+|+.. + .+.+||||+|.+.+.+.+..++||++++++.||+|||+|.|.+ .. .....|+|
T Consensus 13 ~~L~V~Vi~A~~L~~~------~-~~~~DpyVkv~l~~~~~~~~~~kT~v~~~~~nP~wnE~F~f~~~~~~~l~~~~L~~ 85 (122)
T cd08381 13 GTLFVMVMHAKNLPLL------D-GSDPDPYVKTYLLPDPQKTTKRKTKVVRKTRNPTFNEMLVYDGLPVEDLQQRVLQV 85 (122)
T ss_pred CEEEEEEEEeeCCCCC------C-CCCCCCEEEEEEeeCCccCCceeCCccCCCCCCCcccEEEEecCChHHhCCCEEEE
Confidence 5799999999999642 3 4578999999998766566788999999999999999999987 32 23468999
Q ss_pred EEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
.|||+|..+++++||++.+||..+..+
T Consensus 86 ~V~d~d~~~~~~~lG~~~i~l~~l~~~ 112 (122)
T cd08381 86 SVWSHDSLVENEFLGGVCIPLKKLDLS 112 (122)
T ss_pred EEEeCCCCcCCcEEEEEEEeccccccC
Confidence 999999888899999999999998755
No 49
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD). PLD hydrolyzes terminal phosphodiester bonds in diester glycerophospholipids resulting in the degradation of phospholipids. In vitro PLD transfers phosphatidic acid to primary alcohols. In plants PLD plays a role in germination, seedling growth, phosphatidylinositol metabolism, and changes in phospholipid composition. There is a single Ca(2+)/phospholipid-binding C2 domain in PLD. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins whic
Probab=99.61 E-value=8.9e-15 Score=137.48 Aligned_cols=125 Identities=25% Similarity=0.382 Sum_probs=100.3
Q ss_pred CceEEEEEEEecCCCCCCCC-------------C---cc--------CCCCCCCceeEEEEeccCCCceeeecccCCCCC
Q 008582 431 KKTLKVTVYMGEGWYYDFPH-------------T---HF--------DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNW 486 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~-------------~---~~--------~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~ 486 (561)
.++|.|+|+.|++|+..... . .. ...+.+||||+|.+.+. ...||+++.++.
T Consensus 6 hG~L~v~I~eA~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~sDPYv~V~l~~~----~~~rT~v~~~~~ 81 (158)
T cd04015 6 HGTLDVTIYEADNLPNMDMFSEKLRRFFSKLVGCSEPTLKRPSSHRHVGKITSDPYATVDLAGA----RVARTRVIENSE 81 (158)
T ss_pred eeeeEEEEEEeccCCCcccccchhhHHHHHHHhhcccccccccccccCCCCCcCeEEEEEECCe----EeeEEEEeCCCC
Confidence 46899999999999852100 0 00 13456799999999652 346899999999
Q ss_pred CCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccC-eEEEEEEEEC
Q 008582 487 IPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEFI 561 (561)
Q Consensus 487 nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~-atLlv~~~f~ 561 (561)
||+|||+|.|.+..+ ...|.|.|+|+|..+ +++||++.+|++.+..|. +|++|.+..|++..+ +.|.|+++|+
T Consensus 82 nP~WnE~F~~~~~~~-~~~l~~~V~d~d~~~-~~~IG~~~i~l~~l~~g~~~~~w~~L~~~~~~~~~~~~~l~v~~~f~ 158 (158)
T cd04015 82 NPVWNESFHIYCAHY-ASHVEFTVKDNDVVG-AQLIGRAYIPVEDLLSGEPVEGWLPILDSNGKPPKPGAKIRVSLQFT 158 (158)
T ss_pred CCccceEEEEEccCC-CCEEEEEEEeCCCcC-CcEEEEEEEEhHHccCCCCcceEEECcCCCCCCCCCCCEEEEEEEEC
Confidence 999999999987644 357999999998765 789999999999998876 688999999998764 8999999996
No 50
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.61 E-value=8.1e-15 Score=136.57 Aligned_cols=117 Identities=22% Similarity=0.344 Sum_probs=95.7
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||+++.+ +.||+|||+|.|.+..+....|.|.|+
T Consensus 1 ~L~V~Vi~A~~L~~------~d~~g~sDPYV~v~l~~-----~~~kTk~~~~~t~nP~WNE~F~f~v~~~~~~~l~v~V~ 69 (150)
T cd04019 1 YLRVTVIEAQDLVP------SDKNRVPEVFVKAQLGN-----QVLRTRPSQTRNGNPSWNEELMFVAAEPFEDHLILSVE 69 (150)
T ss_pred CEEEEEEEeECCCC------CCCCCCCCeEEEEEECC-----EEeeeEeccCCCCCCcccCcEEEEecCccCCeEEEEEE
Confidence 38999999999963 23456789999999964 5778998877 599999999999987655568999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-------ceEEEccCCCC-----C-cccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-------IRAVPLHDRKG-----E-RYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-------yR~ipL~d~~G-----~-~~~~atLlv~~~f 560 (561)
|++..+++++||++.+||+.+..| -+|.||.+..| + ....+.|.|++.|
T Consensus 70 d~~~~~~dd~lG~v~i~L~~l~~~~~~~~~~~~W~~L~~~~~~~~~~k~~k~~g~l~l~i~~ 131 (150)
T cd04019 70 DRVGPNKDEPLGRAVIPLNDIERRVDDRPVPSRWFSLERPGGAMEQKKKRKFASRIHLRLCL 131 (150)
T ss_pred EecCCCCCCeEEEEEEEHHHCcccCCCCccCCceEECcCCCCcccccccCcccccEEEEEEe
Confidence 999877899999999999998654 57899998765 2 2345789999887
No 51
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.61 E-value=8e-15 Score=132.51 Aligned_cols=114 Identities=24% Similarity=0.308 Sum_probs=89.3
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
.|.|+|++|++++.- . ..+..+.+||||.|.+.+ .+.||+++.++.||+|||+|.|.+..++ ..|.|.|||
T Consensus 1 ~L~v~v~~A~~~~~l-~--~~d~~g~sDPYv~i~~g~-----~~~rTk~~~~~~nP~WnE~f~f~v~~~~-~~l~v~V~d 71 (126)
T cd08379 1 ILEVGILGAQGLDVL-R--AKDGRGSTDAYCVAKYGP-----KWVRTRTVEDSSNPRWNEQYTWPVYDPC-TVLTVGVFD 71 (126)
T ss_pred CeEEEEEEeECCccc-c--ccccCCCCCeeEEEEECC-----EEeEcCcccCCCCCcceeEEEEEecCCC-CEEEEEEEE
Confidence 489999999994211 1 124457789999999843 5779999999999999999999987654 479999999
Q ss_pred cCCCC------CCcceEEEEEeCcccCCCce---EEEccCCCCCcc-cCeEEE
Q 008582 513 YDMSE------KDDFGGQTCLPVSELKQGIR---AVPLHDRKGERY-KSVKLL 555 (561)
Q Consensus 513 ~d~~~------~dd~iGq~~lpL~~L~~GyR---~ipL~d~~G~~~-~~atLl 555 (561)
++..+ ++++||++.+||+.+..|.+ +.||.+.+++.. ..+.|-
T Consensus 72 ~d~~~~~~~~~~dd~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~g~l~ 124 (126)
T cd08379 72 NSQSHWKEAVQPDVLIGKVRIRLSTLEDDRVYAHSYPLLSLNPSGVKKMGELE 124 (126)
T ss_pred CCCccccccCCCCceEEEEEEEHHHccCCCEEeeEEEeEeCCCCCccCCcEEE
Confidence 98753 79999999999999998864 789987665443 344553
No 52
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. The cds in this family contain multiple C2 domains as well as a C-terminal PRT domain. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal tran
Probab=99.61 E-value=1.4e-14 Score=128.75 Aligned_cols=118 Identities=24% Similarity=0.381 Sum_probs=97.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+... ...|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~~T~~~~~t~nP~W~e~f~~~~~~~-~~~l~~~v~ 68 (119)
T cd08377 1 GFLQVKVIRASGLAAA------DIGGKSDPFCVLELVN-----ARLQTHTIYKTLNPEWNKIFTFPIKDI-HDVLEVTVY 68 (119)
T ss_pred CEEEEEEEeeeCCCCC------CCCCCCCcEEEEEECC-----EeeecceecCCcCCccCcEEEEEecCc-CCEEEEEEE
Confidence 3689999999999642 3345689999999864 357999999999999999999997532 357899999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|++..+++++||++.+++..+..|. ++.+|.+..+..-..++|++.++|+
T Consensus 69 d~~~~~~~~~iG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~G~i~l~~~~~ 119 (119)
T cd08377 69 DEDKDKKPEFLGKVAIPLLSIKNGERKWYALKDKKLRTRAKGSILLEMDVI 119 (119)
T ss_pred ECCCCCCCceeeEEEEEHHHCCCCCceEEECcccCCCCceeeEEEEEEEeC
Confidence 9988778999999999999998886 4668988777666678999999986
No 53
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp4/granuphilin promotes dense-core vesicle exocytosis. The C2A domain of Slp4 is Ca2+ dependent. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2
Probab=99.61 E-value=5.7e-15 Score=133.37 Aligned_cols=108 Identities=21% Similarity=0.334 Sum_probs=85.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|.|+|++|++|+... ...+.+||||+|.+........++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 13 ~~~~L~V~Vi~a~~L~~~~-----~~~~~~DpyVkv~l~p~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~l~~~~L~ 87 (125)
T cd04029 13 KTQSLNVHVKECRNLAYGD-----EAKKRSNPYVKTYLLPDKSRQSKRKTSIKRNTTNPVYNETLKYSISHSQLETRTLQ 87 (125)
T ss_pred CCCeEEEEEEEecCCCccC-----CCCCCCCcEEEEEEEcCCccccceEeeeeeCCCCCcccceEEEECCHHHhCCCEEE
Confidence 4568999999999996421 12356899999999644333457799999999999999999999865443 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC---ceEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~ 542 (561)
|.|||+|..+++++||++.++|.++... -.|.||.
T Consensus 88 ~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~~~w~~l~ 125 (125)
T cd04029 88 LSVWHYDRFGRNTFLGEVEIPLDSWNFDSQHEECLPLH 125 (125)
T ss_pred EEEEECCCCCCCcEEEEEEEeCCcccccCCcccEEECc
Confidence 9999999888999999999999998543 3567763
No 54
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates
Probab=99.60 E-value=9.8e-15 Score=131.85 Aligned_cols=118 Identities=20% Similarity=0.270 Sum_probs=92.2
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC---ceEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIE 509 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lrf~ 509 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++ ...|+|.
T Consensus 1 ~L~V~vi~A~~L~~~------d~~g~~dpyv~v~~~~-----~~~rT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~~~ 69 (127)
T cd04022 1 KLVVEVVDAQDLMPK------DGQGSSSAYVELDFDG-----QKKRTRTKPKDLNPVWNEKLVFNVSDPSRLSNLVLEVY 69 (127)
T ss_pred CeEEEEEEeeCCCCC------CCCCCcCcEEEEEECC-----EEecceeEcCCCCCccceEEEEEccCHHHccCCeEEEE
Confidence 489999999999632 3345689999999864 5779999999999999999999987543 2579999
Q ss_pred EEecCCCC-CCcceEEEEEeCcccC-CC---ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 510 VHEYDMSE-KDDFGGQTCLPVSELK-QG---IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 510 V~D~d~~~-~dd~iGq~~lpL~~L~-~G---yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|||.+... ++++||++.++++.+. .| ..+.+|..+....-..+.|.+++.|.
T Consensus 70 V~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~~ 126 (127)
T cd04022 70 VYNDRRSGRRRSFLGRVRISGTSFVPPSEAVVQRYPLEKRGLFSRVRGEIGLKVYIT 126 (127)
T ss_pred EeeCCCCcCCCCeeeEEEEcHHHcCCCCCccceEeEeeeCCCCCCccEEEEEEEEEc
Confidence 99988765 7999999999999986 45 46778875432222346888888763
No 55
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.59 E-value=2.6e-14 Score=132.26 Aligned_cols=107 Identities=21% Similarity=0.225 Sum_probs=85.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|.|+|+.|.+|+.. .+..+.+||||++.+........++||++++++.||+|||+|.|.+. .....|.|.||
T Consensus 29 ~~L~V~Vi~ArnL~~~-----~~~~g~sDPYVKv~Llp~~~~~~k~KT~v~kktlnPvfNE~F~f~v~-l~~~~L~v~V~ 102 (146)
T cd04028 29 GQLEVEVIRARGLVQK-----PGSKVLPAPYVKVYLLEGKKCIAKKKTKIARKTLDPLYQQQLVFDVS-PTGKTLQVIVW 102 (146)
T ss_pred CEEEEEEEEeeCCCcc-----cCCCCCcCCeEEEEEECCCccccceeceecCCCCCCccCCeEEEEEc-CCCCEEEEEEE
Confidence 5799999999999631 02235679999999975444445889999999999999999999997 44567999999
Q ss_pred -ecCCCCCCcceEEEEEeCcccCCCc---eEEEccCC
Q 008582 512 -EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDR 544 (561)
Q Consensus 512 -D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~ 544 (561)
|++...++++||++.++|+.+..+. .|-+|.+.
T Consensus 103 ~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~Wy~L~~~ 139 (146)
T cd04028 103 GDYGRMDKKVFMGVAQILLDDLDLSNLVIGWYKLFPT 139 (146)
T ss_pred eCCCCCCCCceEEEEEEEcccccCCCCceeEEecCCc
Confidence 5777778999999999999986553 45577653
No 56
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. SHD of Slp (except for the Slp4-SHD) function as a specific Rab27A/B-binding domain. In addition to Slp, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. Little is known about the expression or localization of Slp3. The C2A domain of Slp3 is Ca2+ dependent. It has been demonstrated that Slp3 promotes dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids
Probab=99.59 E-value=1.7e-14 Score=130.88 Aligned_cols=99 Identities=17% Similarity=0.253 Sum_probs=82.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
....|.|+|+.|++|+.. +. .+.+||||+|.+...+....++||++++++.||+|||+|.|.+...++ ..|
T Consensus 13 ~~~~L~V~V~~a~nL~~~------d~~~g~~dpYVkv~llp~~~~~~k~kT~v~~~t~nPvfNE~F~f~v~~~~l~~~~L 86 (128)
T cd08392 13 RTSCLEITIKACRNLAYG------DEKKKKCHPYVKVCLLPDKSHNSKRKTAVKKGTVNPVFNETLKYVVEADLLSSRQL 86 (128)
T ss_pred CCCEEEEEEEecCCCCcc------CCCCCCCCeEEEEEEEeCCcccceeecccccCCCCCccceEEEEEcCHHHhCCcEE
Confidence 346899999999999642 22 256799999999765555568899999999999999999999865443 579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~ 534 (561)
.|.|||.+..+++++||++.|||+.+.-
T Consensus 87 ~v~V~~~~~~~~~~~lG~~~i~L~~~~~ 114 (128)
T cd08392 87 QVSVWHSRTLKRRVFLGEVLIPLADWDF 114 (128)
T ss_pred EEEEEeCCCCcCcceEEEEEEEcCCccc
Confidence 9999999988889999999999998854
No 57
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike Slp3 and Slp4/granuphilin which are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety
Probab=99.58 E-value=1.3e-14 Score=131.00 Aligned_cols=99 Identities=18% Similarity=0.238 Sum_probs=81.8
Q ss_pred CceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
...|.|+|+.|.+|+.. +. .+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 14 ~~~L~V~vi~a~~L~~~------d~~~g~~dpyVkv~l~p~~~~~~~~kT~v~~~t~nP~~nE~f~f~v~~~~l~~~~L~ 87 (125)
T cd08393 14 LRELHVHVIQCQDLAAA------DPKKQRSDPYVKTYLLPDKSNRGKRKTSVKKKTLNPVFNETLRYKVEREELPTRVLN 87 (125)
T ss_pred CCEEEEEEEEeCCCCCc------CCCCCCCCcEEEEEEEcCCCccccccCccCcCCCCCccCceEEEECCHHHhCCCEEE
Confidence 46899999999999742 22 246799999999765544557899999999999999999999864433 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|.|||+|..+++++||++.+||..+..+
T Consensus 88 ~~V~d~~~~~~~~~iG~~~i~L~~~~~~ 115 (125)
T cd08393 88 LSVWHRDSLGRNSFLGEVEVDLGSWDWS 115 (125)
T ss_pred EEEEeCCCCCCCcEeEEEEEecCccccC
Confidence 9999999888899999999999998544
No 58
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling s
Probab=99.58 E-value=7.2e-15 Score=134.37 Aligned_cols=113 Identities=20% Similarity=0.185 Sum_probs=91.6
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRI 508 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf 508 (561)
...|.|+|++|++|+. .+..+.+||||+|.+.+......++||++++++.||.|||+|.|.+...++ ..|.|
T Consensus 14 ~~~L~V~vi~a~~L~~------~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~k~t~nP~w~e~F~f~v~~~~~~~~~l~~ 87 (136)
T cd08404 14 TNRLTVVVLKARHLPK------MDVSGLADPYVKVNLYYGKKRISKKKTHVKKCTLNPVFNESFVFDIPSEELEDISVEF 87 (136)
T ss_pred CCeEEEEEEEeeCCCc------cccCCCCCeEEEEEEEcCCceeeeEcCccccCCCCCccCceEEEECCHHHhCCCEEEE
Confidence 4579999999999963 234567899999999754433457799999999999999999999865333 46899
Q ss_pred EEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
.|||+|..+++++||++.+++.+...|.+++ .|.+..|+++
T Consensus 88 ~v~d~d~~~~~~~iG~~~~~~~~~~~~~~~w~~l~~~~~~~i 129 (136)
T cd08404 88 LVLDSDRVTKNEVIGRLVLGPKASGSGGHHWKEVCNPPRRQI 129 (136)
T ss_pred EEEECCCCCCCccEEEEEECCcCCCchHHHHHHHHhCCCCee
Confidence 9999998888999999999999977778776 5567667765
No 59
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3). RasA3 are members of GTPase activating protein 1 (GAP1), a Ras-specific GAP, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA3 contains an N-terminal C2 domain, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.57 E-value=1.9e-14 Score=133.69 Aligned_cols=108 Identities=24% Similarity=0.279 Sum_probs=87.4
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-----------C
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-----------P 501 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-----------p 501 (561)
+|+|+|+.|++|+. ..+.+||||+|.+.+......++||+++.++.||+|||+|.|.+.. +
T Consensus 1 kL~V~Vi~ArnL~~--------~~g~sDPYV~V~l~~~~~k~~~~kT~v~~~t~nP~wNE~F~F~v~~~~~~~~~~~~~~ 72 (148)
T cd04010 1 KLSVRVIECSDLAL--------KNGTCDPYASVTLIYSNKKQDTKRTKVKKKTNNPQFDEAFYFDVTIDSSPEKKQFEMP 72 (148)
T ss_pred CEEEEEEeCcCCCC--------CCCCCCceEEEEEeCCcccCcccCCccEeCCCCCccceEEEEEEecccccccccccCC
Confidence 48999999999963 2356799999999875555567899999999999999999999841 1
Q ss_pred ----CceEEEEEEEecCCCCCCcceEEEEEeCcccCCC----ceEEEccCCCCCc
Q 008582 502 ----ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGER 548 (561)
Q Consensus 502 ----ela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G----yR~ipL~d~~G~~ 548 (561)
+...|.|.|||++..++++|||++.|||..+..+ -.|.+|.......
T Consensus 73 ~~~~~~~~L~i~V~d~~~~~~ddfLG~v~i~l~~l~~~~~~~~~W~~L~~~~~~~ 127 (148)
T cd04010 73 EEDAEKLELRVDLWHASMGGGDVFLGEVRIPLRGLDLQAGSHQAWYFLQPREEKS 127 (148)
T ss_pred cccccEEEEEEEEEcCCCCCCCceeEEEEEecccccccCCcCcceeecCCccccc
Confidence 2357999999999877899999999999999876 2577887655443
No 60
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset. MCTPs are involved in Ca2+ signaling at the membrane. Plant-MCTPs are composed of a variable N-terminal sequence, four C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphate
Probab=99.57 E-value=3.1e-14 Score=127.81 Aligned_cols=110 Identities=29% Similarity=0.408 Sum_probs=91.8
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. .+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+....|.|.|||+
T Consensus 2 L~V~Vi~a~~L~~~----------~~Dpyv~v~l~~-----~~~kT~v~~~t~nP~Wne~F~f~~~~~~~~~L~~~v~d~ 66 (121)
T cd08378 2 LYVRVVKARGLPAN----------SNDPVVEVKLGN-----YKGSTKAIERTSNPEWNQVFAFSKDRLQGSTLEVSVWDK 66 (121)
T ss_pred EEEEEEEecCCCcc----------cCCCEEEEEECC-----ccccccccCCCCCCccceEEEEEcCCCcCCEEEEEEEeC
Confidence 78999999999631 469999999853 477999999999999999999998766667899999999
Q ss_pred CCCCCCcceEEEEEeCcccCC--------CceEEEccCCCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQ--------GIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~--------GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.. ++++||++.++|+.+.. .-+|.+|.+..+.... +.|.+.+.|
T Consensus 67 d~~-~~~~lG~~~i~l~~l~~~~~~~~~~~~~W~~L~~~~~~~~~-G~i~l~~~~ 119 (121)
T cd08378 67 DKA-KDDFLGGVCFDLSEVPTRVPPDSPLAPQWYRLEDKKGGRVG-GELMLAVWF 119 (121)
T ss_pred CCC-cCceeeeEEEEhHhCcCCCCCCCCCCcceEEccCCCCCccc-eEEEEEEEe
Confidence 866 69999999999999854 2478999888774444 588888877
No 61
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD). PSD is involved in the biosynthesis of aminophospholipid by converting phosphatidylserine (PtdSer) to phosphatidylethanolamine (PtdEtn). There is a single C2 domain present and it is thought to confer PtdSer binding motif that is common to PKC and synaptotagmin. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM
Probab=99.57 E-value=1.8e-14 Score=126.78 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=79.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
+.|.|+|++|++|+.... .......+||||+|.+.+ .++||++++++.||+|||+|.|.+...+. ..|.|.|
T Consensus 1 g~l~v~v~~A~~L~~~~~--~~~~~~~~DPYv~v~~~~-----~~~kT~v~~~t~nPvWne~f~f~v~~~~~~~~L~~~V 73 (108)
T cd04039 1 GVVFMEIKSITDLPPLKN--MTRTGFDMDPFVIISFGR-----RVFRTSWRRHTLNPVFNERLAFEVYPHEKNFDIQFKV 73 (108)
T ss_pred CEEEEEEEeeeCCCCccc--cCCCCCccCceEEEEECC-----EeEeeeeecCCCCCcccceEEEEEeCccCCCEEEEEE
Confidence 368999999999974210 011123479999999842 46789999999999999999999875444 4799999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
||+|..+++++||++.++|+.|..||
T Consensus 74 ~D~d~~~~dd~IG~~~l~L~~l~~~~ 99 (108)
T cd04039 74 LDKDKFSFNDYVATGSLSVQELLNAA 99 (108)
T ss_pred EECCCCCCCcceEEEEEEHHHHHhhC
Confidence 99998889999999999999998887
No 62
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42). Nedd4 and Nedd4-2 are two of the nine members of the Human Nedd4 family. All vertebrates appear to have both Nedd4 and Nedd4-2 genes. They are thought to participate in the regulation of epithelial Na+ channel (ENaC) activity. They also have identical specificity for ubiquitin conjugating enzymes (E2). Nedd4 and Nedd4-2 are composed of a C2 domain, 2-4 WW domains, and a ubiquitin ligase Hect domain. Their WW domains can bind PPxY (PY) or LPSY motifs, and in vitro studies suggest that WW3 and WW4 of both proteins bind PY motifs in the key substrates, with WW3 generally exhibiting higher affinity. Most Nedd4 family members, especially Nedd4-2, also have multiple splice variants, which might play different roles in regulating their substrates. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.56 E-value=4e-14 Score=128.57 Aligned_cols=122 Identities=25% Similarity=0.379 Sum_probs=94.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccC--CCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p--~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.|+|+|++|++|+.. +..+.+||||+|.+.+.. ....+.+|++++++.||.|||+|.|.+... ...|.|.|
T Consensus 1 ~L~v~Vi~a~~L~~~------d~~~~~Dpyv~v~~~~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~~~v 73 (133)
T cd04033 1 ILRVKVLAGIDLAKK------DIFGASDPYVKISLYDPDGNGEIDSVQTKTIKKTLNPKWNEEFFFRVNPR-EHRLLFEV 73 (133)
T ss_pred CEEEEEEEeECCCcc------cCCCCcCcEEEEEEECCCCCCcccceeeeEEcCCCCCcEeeEEEEEEcCC-CCEEEEEE
Confidence 389999999999632 334668999999998641 122356899999999999999999998543 45689999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc---------eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI---------RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy---------R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
||++..+++++||++.++++++..+- .+.+|....+..-..+.|.+.+.|.
T Consensus 74 ~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~G~l~~~~~~~ 133 (133)
T cd04033 74 FDENRLTRDDFLGQVEVPLNNLPTETPGNERRYTFKDYLLRPRSSKSRVKGHLRLYMAYL 133 (133)
T ss_pred EECCCCCCCCeeEEEEEEHHHCCCcCccccccccchheeeeecCCCCcceeEEEEEEeeC
Confidence 99998888999999999999886432 5668875433333456899999884
No 63
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of the class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis. It, like synaptotagmin-2, has an N-glycosylated N-terminus. Synaptotagmin 4, a member of class 4 synaptotagmins, is located in the brain. It functions are unknown. It, like synaptotagmin-11, has an Asp to Ser substitution in its C2A domain. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are:
Probab=99.56 E-value=1.1e-14 Score=133.20 Aligned_cols=115 Identities=20% Similarity=0.252 Sum_probs=92.0
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
+..++|+|+|++|++|+. .+..+.+||||+|.+.+......+++|++++++.||.|||+|.|.+...++ ..|
T Consensus 12 ~~~~~l~V~Vi~a~~L~~------~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l 85 (136)
T cd08402 12 PTAGKLTVVILEAKNLKK------MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKRTLNPYYNESFSFEVPFEQIQKVHL 85 (136)
T ss_pred CCCCeEEEEEEEeeCCCc------ccCCCCCCCeEEEEEEECCcccceeeccceeCCCCCcccceEEEECCHHHhCCCEE
Confidence 345689999999999963 233466899999999754444456789999999999999999999865544 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
+|.|||.+..+++++||++.+++.+...++.|+ +|....++++
T Consensus 86 ~~~v~d~~~~~~~~~iG~~~i~~~~~~~~~~~W~~~~~~~~~~~ 129 (136)
T cd08402 86 IVTVLDYDRIGKNDPIGKVVLGCNATGAELRHWSDMLASPRRPI 129 (136)
T ss_pred EEEEEeCCCCCCCceeEEEEECCccCChHHHHHHHHHhCCCCee
Confidence 999999998888999999999999988777655 6766666554
No 64
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-
Probab=99.56 E-value=1.2e-14 Score=132.83 Aligned_cols=125 Identities=18% Similarity=0.221 Sum_probs=93.2
Q ss_pred ccceeeeecccCCCCcccCCCCCCCCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC
Q 008582 405 GAQMVAFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED 484 (561)
Q Consensus 405 G~QmVALN~QnG~~Gyvl~P~~~~p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n 484 (561)
|.-++||.|+ |..+.|+|+|++|++|+. .+..+.+||||+|.+.+......+++|+++++
T Consensus 1 G~i~~~l~y~--------------~~~~~L~V~vi~a~~L~~------~d~~g~~DPyV~v~l~~~~~~~~~~kT~v~~~ 60 (135)
T cd08410 1 GELLLSLNYL--------------PSAGRLNVDIIRAKQLLQ------TDMSQGSDPFVKIQLVHGLKLIKTKKTSCMRG 60 (135)
T ss_pred CcEEEEEEEC--------------CCCCeEEEEEEEecCCCc------ccCCCCCCeEEEEEEEcCCcccceEcCccccC
Confidence 4446677776 334689999999999963 23446789999999853222234578999999
Q ss_pred CCCCccccEEEEeeecCCc--eEEEEEEEecCCCCCCcceEEEEEeCcccCCC-c-eEEEccCCCCCcc
Q 008582 485 NWIPSWNEEFEFPLSVPEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-I-RAVPLHDRKGERY 549 (561)
Q Consensus 485 n~nP~WNE~f~F~v~~pel--a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G-y-R~ipL~d~~G~~~ 549 (561)
+.||+|||+|.|.+...++ ..|+|.|||+|..+++++||++.|........ - .|-.|++..|+++
T Consensus 61 t~nP~wnE~F~f~i~~~~l~~~~l~~~V~d~d~~~~~~~iG~~~l~~~~~~~~~~~~W~~l~~~~~~~~ 129 (135)
T cd08410 61 TIDPFYNESFSFKVPQEELENVSLVFTVYGHNVKSSNDFIGRIVIGQYSSGPSETNHWRRMLNSQRTAV 129 (135)
T ss_pred CCCCccceeEEEeCCHHHhCCCEEEEEEEeCCCCCCCcEEEEEEEcCccCCchHHHHHHHHHhCCCCEe
Confidence 9999999999999865444 36999999999888999999998777665542 2 3346667666664
No 65
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1). RasA1 is a GAP1 (GTPase activating protein 1), a Ras-specific GAP member, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA1 contains a C2 domain, a Ras-GAP domain, a pleckstrin homology (PH)-like domain, a SH3 domain, and 2 SH2 domains. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficki
Probab=99.56 E-value=7.8e-14 Score=126.06 Aligned_cols=116 Identities=19% Similarity=0.267 Sum_probs=91.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. +.+||||+|.+.+ ....||++. ++.||.|||+|.|.+..+++..+.|.|+
T Consensus 4 ~~L~V~Vi~A~~L~~~---------~~~DPYv~v~l~~----~~~~kT~v~-~~~nP~WnE~f~f~~~~~~~~~l~v~v~ 69 (126)
T cd08400 4 RSLQLNVLEAHKLPVK---------HVPHPYCVISLNE----VKVARTKVR-EGPNPVWSEEFVFDDLPPDVNSFTISLS 69 (126)
T ss_pred eEEEEEEEEeeCCCCC---------CCCCeeEEEEECC----EeEEEeecC-CCCCCccCCEEEEecCCCCcCEEEEEEE
Confidence 4699999999999631 2469999999954 234688874 5799999999999876666667889999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCC-CcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG-ERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G-~~~~~atLlv~~~f~ 561 (561)
|.+..+++++||++.+||..+..|. .|.+|....+ ..-..+.|.+++.|.
T Consensus 70 d~~~~~~d~~iG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~~~~G~i~l~l~~~ 123 (126)
T cd08400 70 NKAKRSKDSEIAEVTVQLSKLQNGQETDEWYPLSSASPLKGGEWGSLRIRARYS 123 (126)
T ss_pred ECCCCCCCCeEEEEEEEHhHccCCCcccEeEEcccCCCCCCCcCcEEEEEEEEE
Confidence 9998888999999999999998886 4778876543 222346888888773
No 66
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 3, a member of class 3 synaptotagmins, is located in the brain and localized to the active zone and plasma membrane. It functions as a Ca2+ sensor for fast exocytosis. It, along with synaptotagmins 5,6, and 10, has disulfide bonds at its N-terminus. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and localized to the synaptic vesicles. It is thought to be a Ca2+-sensor for dense-core vesicle exocytosis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind
Probab=99.56 E-value=1.4e-14 Score=132.12 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=90.9
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|+|+|++|++|+. .+..+.+||||+|.+...+....++||++++++.||.|||+|.|.+...++ ..|.
T Consensus 12 ~~~~L~V~v~~A~~L~~------~d~~g~~dpyvkv~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~~~~~~l~ 85 (134)
T cd08403 12 TAGRLTLTIIKARNLKA------MDITGFSDPYVKVSLMCEGRRLKKKKTSVKKNTLNPTYNEALVFDVPPENVDNVSLI 85 (134)
T ss_pred CCCEEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCcccceecCCcccCCCCCcccceEEEECCHHHhCCCEEE
Confidence 44689999999999963 234567899999998653333456789999999999999999999754333 4689
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.|||++..+++++||++.+|+.....|+.|+ .|....|+++
T Consensus 86 ~~v~d~~~~~~~~~IG~~~l~~~~~~~~~~~w~~~~~~~~~~~ 128 (134)
T cd08403 86 IAVVDYDRVGHNELIGVCRVGPNADGQGREHWNEMLANPRKPI 128 (134)
T ss_pred EEEEECCCCCCCceeEEEEECCCCCCchHHHHHHHHHCCCCee
Confidence 99999998888999999999999888888765 6666666654
No 67
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 1, a member of class 1 synaptotagmins, is located in the brain and endocranium and localized to the synaptic vesicles and secretory granules. It functions as a Ca2+ sensor for fast exocytosis as do synaptotagmins 5, 6, and 10. It is distinguished from the other synaptotagmins by having an N-glycosylated N-terminus. Synaptotagmins 5, 6, and 10, members of class 3 synaptotagmins, are located primarily in the brain and localized to the active zone and plasma membrane. They is distinguished from the other synaptotagmins by having disulfide bonds at its N-terminus. Synaptotagmin 6 also regulates the acrosome reaction, a unique Ca2+-regulated exocytosis, in sperm. Synaptotagmin 9, a class 5 synaptotagmins, is located in the brain and
Probab=99.56 E-value=4.5e-14 Score=126.76 Aligned_cols=99 Identities=23% Similarity=0.289 Sum_probs=81.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|+|+|++|++|+.. +..+.+||||+|.+.+ ....++||++++++.||+|||+|.|.+..+++ ..|+
T Consensus 14 ~~~~L~V~v~~a~~L~~~------d~~~~~dpyv~v~l~~--~~~~~~kT~v~~~t~nP~wne~f~f~i~~~~l~~~~l~ 85 (124)
T cd08385 14 QSNQLTVGIIQAADLPAM------DMGGTSDPYVKVYLLP--DKKKKFETKVHRKTLNPVFNETFTFKVPYSELGNKTLV 85 (124)
T ss_pred CCCEEEEEEEEeeCCCCc------cCCCCCCCEEEEEEEc--CCCCceecccCcCCCCCceeeeEEEeCCHHHhCCCEEE
Confidence 346899999999999632 2345679999999964 33457799999999999999999999865443 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|.|||++..+++++||++.+||+.+..|.
T Consensus 86 ~~V~d~d~~~~~~~lG~~~i~l~~~~~~~ 114 (124)
T cd08385 86 FSVYDFDRFSKHDLIGEVRVPLLTVDLGH 114 (124)
T ss_pred EEEEeCCCCCCCceeEEEEEecCcccCCC
Confidence 99999998888999999999999986554
No 68
>cd04041 C2A_fungal C2 domain first repeat; fungal group. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligan
Probab=99.55 E-value=2.1e-14 Score=126.75 Aligned_cols=103 Identities=18% Similarity=0.171 Sum_probs=84.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCC-CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC---ceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAY-SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~-~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lr 507 (561)
+.|+|+|++|.+|+.. +.. +.+||||+|.+.+.+ ....+|++++++.||+|||+|.|.+..++ ...|.
T Consensus 1 G~L~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~~~--~~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~~~~l~ 72 (111)
T cd04041 1 GVLVVTIHRATDLPKA------DFGTGSSDPYVTASFAKFG--KPLYSTRIIRKDLNPVWEETWFVLVTPDEVKAGERLS 72 (111)
T ss_pred CEEEEEEEEeeCCCcc------cCCCCCCCccEEEEEccCC--CccEeeeeECCCCCCccceeEEEEeCchhccCCCEEE
Confidence 4699999999999642 233 567999999986532 34579999999999999999999886553 35799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEEEcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~ 542 (561)
|.|||+|..+++++||++.+++..|.+--++.||+
T Consensus 73 ~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~ 107 (111)
T cd04041 73 CRLWDSDRFTADDRLGRVEIDLKELIEDRNWMGRR 107 (111)
T ss_pred EEEEeCCCCCCCCcceEEEEEHHHHhcCCCCCccc
Confidence 99999998888999999999999998666777765
No 69
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP). MCTPs are involved in Ca2+ signaling at the membrane. MCTP is composed of a variable N-terminal sequence, three C2 domains, two transmembrane regions (TMRs), and a short C-terminal sequence. It is one of four protein classes that are anchored to membranes via a transmembrane region; the others being synaptotagmins, extended synaptotagmins, and ferlins. MCTPs are the only membrane-bound C2 domain proteins that contain two functional TMRs. MCTPs are unique in that they bind Ca2+ but not phospholipids. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular protei
Probab=99.55 E-value=9.4e-14 Score=123.14 Aligned_cols=110 Identities=24% Similarity=0.350 Sum_probs=89.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|.+|+.. +..+.+||||++.+.+ .+.||+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 ~~V~v~~a~~L~~~------~~~~~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~v~v~d~ 70 (116)
T cd08376 2 VTIVLVEGKNLPPM------DDNGLSDPYVKFRLGN-----EKYKSKVCSKTLNPQWLEQFDLHLFDDQSQILEIEVWDK 70 (116)
T ss_pred EEEEEEEEECCCCC------CCCCCCCcEEEEEECC-----EeEecccccCCCCCceeEEEEEEecCCCCCEEEEEEEEC
Confidence 78999999999642 2345689999999853 567999999999999999999998766567899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
+..+++++||++.++|+.+..+- .+.+|.+. .+.|++.+.+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~~------~G~~~~~~~~ 114 (116)
T cd08376 71 DTGKKDEFIGRCEIDLSALPREQTHSLELELEDG------EGSLLLLLTL 114 (116)
T ss_pred CCCCCCCeEEEEEEeHHHCCCCCceEEEEEccCC------CcEEEEEEEe
Confidence 98888999999999999987654 35577654 2467777765
No 70
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domai
Probab=99.54 E-value=2.2e-14 Score=130.49 Aligned_cols=114 Identities=18% Similarity=0.242 Sum_probs=88.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
..+.|.|+|++|++|+.. +..+.+||||+|.+.+......+.||+++.++.||.|||+|.|.+..+++ ..|.
T Consensus 11 ~~~~L~V~Vi~a~~L~~~------d~~~~~DpyV~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~l~~~~l~ 84 (133)
T cd08384 11 QRRGLIVGIIRCVNLAAM------DANGYSDPFVKLYLKPDAGKKSKHKTQVKKKTLNPEFNEEFFYDIKHSDLAKKTLE 84 (133)
T ss_pred CCCEEEEEEEEEcCCCCc------CCCCCCCcEEEEEEEcCCCccCCceeeeEeccCCCCcccEEEEECCHHHhCCCEEE
Confidence 457899999999999642 33456899999999754334456799999999999999999999876544 4799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.|||.|..+++++||++.+++.+......++ .++...|+++
T Consensus 85 ~~V~d~d~~~~~~~lG~~~i~l~~~~~~~~~W~~~l~~~~~~~ 127 (133)
T cd08384 85 ITVWDKDIGKSNDYIGGLQLGINAKGERLRHWLDCLKNPDKKI 127 (133)
T ss_pred EEEEeCCCCCCccEEEEEEEecCCCCchHHHHHHHHhCCCCCh
Confidence 99999998888999999999998754444333 5655555554
No 71
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins. Saccharomyces cerevisiae Inn1 associates with the contractile actomyosin ring at the end of mitosis and is needed for cytokinesis. The C2 domain of Inn1, located at the N-terminus, is required for ingression of the plasma membrane. The C-terminus is relatively unstructured and contains eight PXXP motifs that are thought to mediate interaction of Inn1 with other proteins with SH3 domains in the cytokinesis proteins Hof1 (an F-BAR protein) and Cyk3 (whose overexpression can restore primary septum formation in Inn1Delta cells) as well as recruiting Inn1 to the bud-neck by binding to Cyk3. Inn1 and Cyk3 appear to cooperate in activating chitin synthase Chs2 for primary septum formation, which allows coordination of actomyosin ring contraction with ingression of the cleavage furrow. It is thought that the C2 domain of Inn1 helps to preserve the link between the actomyosin ring and the plasma membrane, contr
Probab=99.54 E-value=4.5e-14 Score=125.56 Aligned_cols=114 Identities=26% Similarity=0.318 Sum_probs=90.3
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCCceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||+++.+ +.||+|||+|.|.+..+....|.|.|
T Consensus 1 g~L~V~v~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~~l~i~v 69 (118)
T cd08681 1 GTLVVVVLKARNLPN------KRKLDKQDPYCVLRIGG-----VTKKTKTDFRGGQHPEWDEELRFEITEDKKPILKVAV 69 (118)
T ss_pred CEEEEEEEEccCCCC------CCcCCCCCceEEEEECC-----CccccccccCCCCCCccCceEEEEecCCCCCEEEEEE
Confidence 469999999999963 23456789999999864 4678888755 68999999999999776667899999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCC---ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
||++..+ +++||++.+++..+..| -.+.+|.+ .|+ ..+.|.++++|
T Consensus 70 ~d~~~~~-~~~iG~~~~~l~~~~~~~~~~~w~~L~~-~~~--~~G~i~l~l~f 118 (118)
T cd08681 70 FDDDKRK-PDLIGDTEVDLSPALKEGEFDDWYELTL-KGR--YAGEVYLELTF 118 (118)
T ss_pred EeCCCCC-CcceEEEEEecHHHhhcCCCCCcEEecc-CCc--EeeEEEEEEEC
Confidence 9998765 89999999999987554 35667765 343 34588888876
No 72
>cd08375 C2_Intersectin C2 domain present in Intersectin. A single instance of the C2 domain is located C terminally in the intersectin protein. Intersectin functions as a scaffolding protein, providing a link between the actin cytoskeleton and the components of endocytosis and plays a role in signal transduction. In addition to C2, intersectin contains several additional domains including: Eps15 homology domains, SH3 domains, a RhoGEF domain, and a PH domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking pro
Probab=99.53 E-value=1.1e-13 Score=126.81 Aligned_cols=113 Identities=25% Similarity=0.404 Sum_probs=89.6
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ .+.||+++.++.||.|||+|.|.+..+....|.|.||
T Consensus 15 G~L~V~Vi~A~~L~~------~d~~g~~DPYv~v~~~~-----~~~kT~vi~~t~nP~Wne~f~f~v~~~~~~~l~i~V~ 83 (136)
T cd08375 15 GRLMVVIVEGRDLKP------CNSNGKSDPYCEVSMGS-----QEHKTKVVSDTLNPKWNSSMQFFVKDLEQDVLCITVF 83 (136)
T ss_pred EEEEEEEEEeeCCCC------CCCCCCcCcEEEEEECC-----EeeeccccCCCCCCccCceEEEEecCccCCEEEEEEE
Confidence 689999999999863 23456789999999842 5689999999999999999999997766778999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCC------C--ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQ------G--IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~------G--yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|+|..+++++||++.+++..+.. + ++.++|. +. ..+.+.+.+.|
T Consensus 84 D~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~~~~~---~~--~~g~i~l~~~~ 135 (136)
T cd08375 84 DRDFFSPDDFLGRTEIRVADILKETKESKGPITKRLLLH---EV--PTGEVVVKLDL 135 (136)
T ss_pred ECCCCCCCCeeEEEEEEHHHhccccccCCCcEEEEeccc---cc--cceeEEEEEEe
Confidence 99988889999999999998864 1 2445553 22 22356666655
No 73
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein. The members in this cd are named after the Human C21orf25 which contains a single C2 domain. Several other members contain a C1 domain downstream of the C2 domain. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a
Probab=99.53 E-value=9.7e-14 Score=125.25 Aligned_cols=116 Identities=24% Similarity=0.318 Sum_probs=91.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|++|++|+. ..+.+||||++.+.+ ...++||+++.++.||+|||+|.|.+.. +...|.|.|||+
T Consensus 1 l~v~v~~A~~L~~--------~~g~~dpyv~v~~~~---~~~~~kT~v~~~t~nP~Wne~f~f~~~~-~~~~l~~~v~d~ 68 (126)
T cd08678 1 LLVKNIKANGLSE--------AAGSSNPYCVLEMDE---PPQKYQSSTQKNTSNPFWDEHFLFELSP-NSKELLFEVYDN 68 (126)
T ss_pred CEEEEEEecCCCC--------CCCCcCCEEEEEECC---CCcEEEeEEEecCCCCccCceEEEEeCC-CCCEEEEEEEEC
Confidence 5799999999863 345789999999852 1346799999999999999999999853 345689999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCC-cccCeEEEEEEEEC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGE-RYKSVKLLMHFEFI 561 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~-~~~~atLlv~~~f~ 561 (561)
+..+++++||++.++++.+..+. .+.||....++ .-..++|.+++.|+
T Consensus 69 ~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~L~~~~~~~~~~~G~l~l~~~~~ 120 (126)
T cd08678 69 GKKSDSKFLGLAIVPFDELRKNPSGRQIFPLQGRPYEGDSVSGSITVEFLFM 120 (126)
T ss_pred CCCCCCceEEEEEEeHHHhccCCceeEEEEecCCCCCCCCcceEEEEEEEEe
Confidence 98888999999999999987543 45677755432 22356999999885
No 74
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins. RIMs are believed to organize specialized sites of the plasma membrane called active zones. They also play a role in controlling neurotransmitter release, plasticity processes, as well as memory and learning. RIM contains an N-terminal zinc finger domain, a PDZ domain, and two C-terminal C2 domains (C2A, C2B). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as
Probab=99.53 E-value=1.2e-13 Score=123.80 Aligned_cols=96 Identities=24% Similarity=0.374 Sum_probs=79.4
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-C--CceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--ELALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-p--ela~L 506 (561)
..+.|.|+|++|++|+.. +..+.+||||+|.+.+...+..++||++++++.||+|||+|.|.+.. . ....|
T Consensus 14 ~~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~l~~~~l 87 (125)
T cd04031 14 VTSQLIVTVLQARDLPPR------DDGSLRNPYVKVYLLPDRSEKSKRRTKTVKKTLNPEWNQTFEYSNVRRETLKERTL 87 (125)
T ss_pred CCCEEEEEEEEecCCCCc------CCCCCCCCEEEEEEccCCCccccccccccCCCCCCccccEEEEcccCHHHhCCCEE
Confidence 456899999999999642 33466899999999765445567899999999999999999998643 2 23679
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSE 531 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~ 531 (561)
+|.|||.+..+++++||++.++|+.
T Consensus 88 ~~~V~d~~~~~~~~~iG~~~i~l~~ 112 (125)
T cd04031 88 EVTVWDYDRDGENDFLGEVVIDLAD 112 (125)
T ss_pred EEEEEeCCCCCCCcEeeEEEEeccc
Confidence 9999999988889999999999997
No 75
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involv
Probab=99.53 E-value=1.2e-13 Score=123.97 Aligned_cols=99 Identities=21% Similarity=0.310 Sum_probs=81.0
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..+.|+|+|++|.+|+. .+..+.+||||+|.+. +....++||++++++.||+|||+|.|.+...+ ...|+
T Consensus 14 ~~~~L~V~v~~a~~L~~------~d~~g~~dpyv~v~l~--~~~~~~~kT~v~~~t~~P~wne~f~f~v~~~~l~~~~l~ 85 (124)
T cd08387 14 DMGILNVKLIQARNLQP------RDFSGTADPYCKVRLL--PDRSNTKQSKIHKKTLNPEFDESFVFEVPPQELPKRTLE 85 (124)
T ss_pred CCCEEEEEEEEeeCCCC------CCCCCCCCCeEEEEEe--cCCCCcEeCceEcCCCCCCcccEEEEeCCHHHhCCCEEE
Confidence 34689999999999963 1334568999999994 33345679999999999999999999986543 34799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|.|||++..+++++||++.++|+.+..|-
T Consensus 86 i~V~d~~~~~~~~~iG~~~i~l~~~~~~~ 114 (124)
T cd08387 86 VLLYDFDQFSRDECIGVVELPLAEVDLSE 114 (124)
T ss_pred EEEEECCCCCCCceeEEEEEecccccCCC
Confidence 99999998888999999999999997553
No 76
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.52 E-value=3.2e-14 Score=130.02 Aligned_cols=114 Identities=18% Similarity=0.191 Sum_probs=88.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..++|+|+|++|++|+. .+..+.+||||+|.+........+.||++++++.||.|||+|.|.+...+ ...|+
T Consensus 13 ~~~~L~v~vi~a~~L~~------~~~~g~~dpyV~v~l~~~~~~~~~~kT~v~~~t~~P~wne~F~f~i~~~~~~~~~l~ 86 (136)
T cd08405 13 TANRITVNIIKARNLKA------MDINGTSDPYVKVWLMYKDKRVEKKKTVIKKRTLNPVFNESFIFNIPLERLRETTLI 86 (136)
T ss_pred CCCeEEEEEEEeeCCCc------cccCCCCCceEEEEEEeCCCccccccCcceeCCCCCcccceEEEeCCHHHhCCCEEE
Confidence 34689999999999963 23356789999999864333334678999999999999999999976433 35799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCceE-EEccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIRA-VPLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~-ipL~d~~G~~~ 549 (561)
|.|||.+..+++++||++.+++.....+..+ ..|....|+++
T Consensus 87 ~~v~d~~~~~~~~~lG~~~i~~~~~~~~~~~w~~~~~~~~~~~ 129 (136)
T cd08405 87 ITVMDKDRLSRNDLIGKIYLGWKSGGLELKHWKDMLSKPRQPV 129 (136)
T ss_pred EEEEECCCCCCCcEeEEEEECCccCCchHHHHHHHHhCCCCch
Confidence 9999999888899999999999987555544 36666666654
No 77
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.52 E-value=1.8e-13 Score=123.51 Aligned_cols=110 Identities=26% Similarity=0.373 Sum_probs=91.9
Q ss_pred EEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCC
Q 008582 438 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDM 515 (561)
Q Consensus 438 Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~ 515 (561)
|++|++|+. ..+.+||||+|.+.+ .++||++++++.||+|||+|.|.+..+ +...|.|.|||++.
T Consensus 2 vi~a~~L~~--------~~g~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~Wne~f~f~~~~~~~~~~~l~~~v~d~~~ 68 (127)
T cd08373 2 VVSLKNLPG--------LKGKGDRIAKVTFRG-----VKKKTRVLENELNPVWNETFEWPLAGSPDPDESLEIVVKDYEK 68 (127)
T ss_pred eEEeeCCcc--------cCCCCCCEEEEEECC-----EeeecceeCCCcCCcccceEEEEeCCCcCCCCEEEEEEEECCC
Confidence 678888853 245679999999864 467999999999999999999998653 45689999999998
Q ss_pred CCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 516 SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 516 ~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.+++++||++.++|+.+..+. .++||.+.+|.++. +.|.+.+.|.
T Consensus 69 ~~~d~~iG~~~~~l~~l~~~~~~~~~~~L~~~~~~~~~-~~l~l~~~~~ 116 (127)
T cd08373 69 VGRNRLIGSATVSLQDLVSEGLLEVTEPLLDSNGRPTG-ATISLEVSYQ 116 (127)
T ss_pred CCCCceEEEEEEEhhHcccCCceEEEEeCcCCCCCccc-EEEEEEEEEe
Confidence 888999999999999988665 47899999888765 5888888873
No 78
>cd08680 C2_Kibra C2 domain found in Human protein Kibra. Kibra is thought to be a regulator of the Salvador (Sav)/Warts (Wts)/Hippo (Hpo) (SWH) signaling network, which limits tissue growth by inhibiting cell proliferation and promoting apoptosis. The core of the pathway consists of a MST and LATS family kinase cascade that ultimately phosphorylates and inactivates the YAP/Yorkie (Yki) transcription coactivator. The FERM domain proteins Merlin (Mer) and Expanded (Ex) are part of the upstream regulation controlling pathway mechanism. Kibra colocalizes and associates with Mer and Ex and is thought to transduce an extracellular signal via the SWH network. The apical scaffold machinery that contains Hpo, Wts, and Ex recruits Yki to the apical membrane facilitating its inhibitory phosphorlyation by Wts. Since Kibra associates with Ex and is apically located it is hypothesized that KIBRA is part of the scaffold, helps in the Hpo/Wts complex, and helps recruit Yki for inactivation that prom
Probab=99.51 E-value=9.5e-14 Score=125.24 Aligned_cols=99 Identities=20% Similarity=0.327 Sum_probs=81.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC-ceeeecccCCCCCCCccccEEEEeeecCCc--eE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD-TVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--AL 505 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d-~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~ 505 (561)
+..+.|.|+|+.|.+|+.. +..+.+||||+|.+...+.. ..++||++++++.||+|||+|.|.+...++ ..
T Consensus 11 ~~~~~L~V~V~~arnL~~~------~~~~~~dpyVKv~Llp~~~~~~~~~kT~v~~~t~nPvfnE~F~f~v~~~~L~~~~ 84 (124)
T cd08680 11 SGDSSLVISVEQLRNLSAL------SIPENSKVYVRVALLPCSSSTSCLFRTKALEDQDKPVFNEVFRVPISSTKLYQKT 84 (124)
T ss_pred CCCCEEEEEEeEecCCccc------ccCCCCCeEEEEEEccCCCCCCceEEcCccCCCCCCccccEEEEECCHHHhhcCE
Confidence 3456899999999999642 23356799999999654332 357899999999999999999999876555 58
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
|+|.|||.+..+++++||++.++|+.+.
T Consensus 85 L~~~V~~~~~~~~~~~lG~~~i~L~~~~ 112 (124)
T cd08680 85 LQVDVCSVGPDQQEECLGGAQISLADFE 112 (124)
T ss_pred EEEEEEeCCCCCceeEEEEEEEEhhhcc
Confidence 9999999998888999999999999884
No 79
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=99.51 E-value=1.2e-13 Score=120.55 Aligned_cols=96 Identities=27% Similarity=0.369 Sum_probs=80.9
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|++|++|+.. +..+.+||||+|.+.+ .++||+++.++.||+|||+|.|.+..++...|.|.|+|.
T Consensus 2 L~V~v~~A~~L~~~------~~~~~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~v~v~d~ 70 (105)
T cd04050 2 LFVYLDSAKNLPLA------KSTKEPSPYVELTVGK-----TTQKSKVKERTNNPVWEEGFTFLVRNPENQELEIEVKDD 70 (105)
T ss_pred EEEEEeeecCCCCc------ccCCCCCcEEEEEECC-----EEEeCccccCCCCCcccceEEEEeCCCCCCEEEEEEEEC
Confidence 78999999999742 3346789999999975 577899999999999999999999887788899999998
Q ss_pred CCCCCCcceEEEEEeCcccCCC-----ceEEEccC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG-----IRAVPLHD 543 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G-----yR~ipL~d 543 (561)
+. +++||++.++|..|..+ -+|.+|.+
T Consensus 71 ~~---~~~iG~~~i~l~~l~~~~~~~~~~w~~L~~ 102 (105)
T cd04050 71 KT---GKSLGSLTLPLSELLKEPDLTLDQPFPLDN 102 (105)
T ss_pred CC---CCccEEEEEEHHHhhccccceeeeeEecCC
Confidence 74 78999999999988643 25667764
No 80
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmins 4 and 11, class 4 synaptotagmins, are located in the brain. Their functions are unknown. They are distinguished from the other synaptotagmins by having and Asp to Ser substitution in their C2A domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence
Probab=99.51 E-value=1.7e-13 Score=124.24 Aligned_cols=97 Identities=22% Similarity=0.268 Sum_probs=77.5
Q ss_pred CceEEEEEEEecCCCCCCCCCccCC-CCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCC--ceEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDA-YSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALL 506 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~-~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pe--la~L 506 (561)
..+|+|+|++|.+|+.. +. .+.+||||+|.+.. ....++||++++++.||+|||+|.|. +...+ ...|
T Consensus 15 ~~~L~V~Vi~a~~L~~~------~~~~~~~DpyV~v~l~~--~~~~~~kT~v~~~t~nP~wnE~F~f~~~~~~~~~~~~L 86 (128)
T cd08388 15 KKALLVNIIECRDLPAM------DEQSGTSDPYVKLQLLP--EKEHKVKTRVLRKTRNPVYDETFTFYGIPYNQLQDLSL 86 (128)
T ss_pred CCEEEEEEEEeECCCCC------CCCCCCcCCEEEEEEeC--CcCceeeccEEcCCCCCceeeEEEEcccCHHHhCCCEE
Confidence 46899999999999742 22 25679999999853 34456799999999999999999994 43222 2369
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
+|.|||+|..+++++||++.+||+.+..+
T Consensus 87 ~~~V~d~d~~~~d~~lG~~~i~L~~l~~~ 115 (128)
T cd08388 87 HFAVLSFDRYSRDDVIGEVVCPLAGADLL 115 (128)
T ss_pred EEEEEEcCCCCCCceeEEEEEeccccCCC
Confidence 99999999888899999999999998433
No 81
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. Slp5 mRNA has been shown to be restricted to human placenta and liver suggesting a role in Rab27A-dependent membrane trafficking in specific tissues. C2 domains fold into
Probab=99.50 E-value=2.6e-13 Score=121.33 Aligned_cols=100 Identities=18% Similarity=0.269 Sum_probs=81.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~L 506 (561)
..+.|.|+|++|++|+.. + ..+.+||||+|.+.+......++||++++++.||+|||+|.|.+...+ ...|
T Consensus 12 ~~~~L~V~v~~a~~L~~~------~~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~~P~wne~f~f~i~~~~l~~~~l 85 (123)
T cd08521 12 KTGSLEVHIKECRNLAYA------DEKKKRSNPYVKVYLLPDKSKQSKRKTSVKKNTTNPVFNETLKYHISKSQLETRTL 85 (123)
T ss_pred CCCEEEEEEEEecCCCCc------CCCCCCCCcEEEEEEecCCCcCceeeccccCCCCCCcccceEEEeCCHHHhCCCEE
Confidence 346899999999999642 2 235689999999864333335789999999999999999999986544 3579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
.|.|||.+..+++++||++.++|+.+..|
T Consensus 86 ~i~v~d~~~~~~~~~iG~~~i~l~~l~~~ 114 (123)
T cd08521 86 QLSVWHHDRFGRNTFLGEVEIPLDSWDLD 114 (123)
T ss_pred EEEEEeCCCCcCCceeeEEEEeccccccc
Confidence 99999999888899999999999998654
No 82
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone. The members of this CD are named after the Human KIAA0528 cDNA clone. All members here contain a single C2 repeat. No other information on this protein is currently known. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/a
Probab=99.50 E-value=1.1e-13 Score=122.03 Aligned_cols=99 Identities=25% Similarity=0.315 Sum_probs=82.3
Q ss_pred EEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCcc-ccEEEEeeecCCc--eEEEEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL--ALLRIE 509 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~W-NE~f~F~v~~pel--a~Lrf~ 509 (561)
|+|+|++|++|+.. + ..+.+||||+|.+.+ .++||+++.++.||.| ||+|.|.+..+++ ..|.|.
T Consensus 1 l~V~v~~a~~L~~~------d~~~~~~Dpyv~v~~~~-----~~~kT~v~~~~~nP~W~ne~f~f~i~~~~l~~~~l~i~ 69 (110)
T cd08688 1 LKVRVVAARDLPVM------DRSSDLTDAFVEVKFGS-----TTYKTDVVKKSLNPVWNSEWFRFEVDDEELQDEPLQIR 69 (110)
T ss_pred CEEEEEEEECCCcc------ccCCCCCCceEEEEECC-----eeEecceecCCCCCcccCcEEEEEcChHHcCCCeEEEE
Confidence 68999999999642 2 235679999999853 6789999999999999 9999999876554 579999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCC---Cc---eEEEccC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHD 543 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~---Gy---R~ipL~d 543 (561)
|||.+..+++++||++.+++..|.. +. +|.+|+|
T Consensus 70 V~d~d~~~~~~~iG~~~~~l~~l~~~~~~~~~~~w~~l~~ 109 (110)
T cd08688 70 VMDHDTYSANDAIGKVYIDLNPLLLKDSVSQISGWFPIYD 109 (110)
T ss_pred EEeCCCCCCCCceEEEEEeHHHhcccCCccccCCeEEccc
Confidence 9999988889999999999999865 33 4778876
No 83
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4. RasA1 and RasA4 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both proteins contain two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such a
Probab=99.50 E-value=2.1e-13 Score=122.37 Aligned_cols=100 Identities=27% Similarity=0.390 Sum_probs=82.5
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||+|||+|.|.+..+....|.|.|||
T Consensus 1 ~L~v~vi~a~~L~~~------d~~~~~DPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~~~~~l~~~v~d 69 (123)
T cd04025 1 RLRCHVLEARDLAPK------DRNGTSDPFVRVFYNG-----QTLETSVVKKSCYPRWNEVFEFELMEGADSPLSVEVWD 69 (123)
T ss_pred CEEEEEEEeeCCCCC------CCCCCcCceEEEEECC-----EEEeceeecCCCCCccCcEEEEEcCCCCCCEEEEEEEE
Confidence 489999999998631 2345679999999853 46789999999999999999999877666789999999
Q ss_pred cCCCCCCcceEEEEEeCcccCCC---ceEEEccC
Q 008582 513 YDMSEKDDFGGQTCLPVSELKQG---IRAVPLHD 543 (561)
Q Consensus 513 ~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d 543 (561)
++..+++++||++.++|..+..+ ..|..|..
T Consensus 70 ~~~~~~~~~iG~~~~~l~~l~~~~~~~~w~~L~~ 103 (123)
T cd04025 70 WDLVSKNDFLGKVVFSIQTLQQAKQEEGWFRLLP 103 (123)
T ss_pred CCCCCCCcEeEEEEEEHHHcccCCCCCCEEECCC
Confidence 99888899999999999998654 34566664
No 84
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.50 E-value=2.1e-13 Score=120.65 Aligned_cols=111 Identities=29% Similarity=0.464 Sum_probs=90.0
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. +..+.+||||+|.+.+ ...++|+++.++.||.|||+|.|.+.......|.|.|||.
T Consensus 1 l~v~vi~a~~L~~~------~~~~~~dpyv~v~~~~----~~~~~T~v~~~~~~P~Wne~f~~~~~~~~~~~l~~~v~d~ 70 (115)
T cd04040 1 LTVDVISAENLPSA------DRNGKSDPFVKFYLNG----EKVFKTKTIKKTLNPVWNESFEVPVPSRVRAVLKVEVYDW 70 (115)
T ss_pred CEEEEEeeeCCCCC------CCCCCCCCeEEEEECC----CcceeeceecCCCCCcccccEEEEeccCCCCEEEEEEEeC
Confidence 57999999998642 2345679999999865 2346899999999999999999998765557899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCC---ceEEEccCCCCCcccCeEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRKGERYKSVKLLM 556 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~G~~~~~atLlv 556 (561)
+..+++++||++.+++..+..| .++++|....|.. .++||+
T Consensus 71 ~~~~~~~~iG~~~~~l~~l~~~~~~~~~~~L~~~g~~~--~~~~~~ 114 (115)
T cd04040 71 DRGGKDDLLGSAYIDLSDLEPEETTELTLPLDGQGGGK--LGAVFL 114 (115)
T ss_pred CCCCCCCceEEEEEEHHHcCCCCcEEEEEECcCCCCcc--CceEEc
Confidence 9888899999999999999888 6788998766643 345664
No 85
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.49 E-value=1.6e-13 Score=127.88 Aligned_cols=107 Identities=24% Similarity=0.374 Sum_probs=82.7
Q ss_pred eEEEEEEEecCCCCCCCCC--------ccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-
Q 008582 433 TLKVTVYMGEGWYYDFPHT--------HFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL- 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~--------~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel- 503 (561)
+|.|+|+.|++|+...... -.+..+.+||||+|.+.| .+.||++++++.||+|||+|.|.+..+..
T Consensus 1 ~~~V~V~~A~dLp~~d~~~~~~~~~~~~~~~~~~~DPYV~V~~~g-----~~~kT~v~~~t~nPvWNE~f~f~v~~p~~~ 75 (151)
T cd04018 1 RFIFKIYRAEDLPQMDSGIMANVKKAFLGEKKELVDPYVEVSFAG-----QKVKTSVKKNSYNPEWNEQIVFPEMFPPLC 75 (151)
T ss_pred CeEEEEEEeCCCCccChhhhccceeccccCCCCCcCcEEEEEECC-----EeeecceEcCCCCCCcceEEEEEeeCCCcC
Confidence 4789999999998521000 011234679999999876 45689999999999999999999876654
Q ss_pred eEEEEEEEecCCCCCCcceEEEEEeCcccCC-C---c------eEEEccCC
Q 008582 504 ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQ-G---I------RAVPLHDR 544 (561)
Q Consensus 504 a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~-G---y------R~ipL~d~ 544 (561)
..|.|.|||+|..++|++||++.++|..+.. | | +|+.|++.
T Consensus 76 ~~l~~~v~D~d~~~~dd~iG~~~l~l~~l~~~~~~~~lp~~~p~W~~lyg~ 126 (151)
T cd04018 76 ERIKIQIRDWDRVGNDDVIGTHFIDLSKISNSGDEGFLPTFGPSFVNLYGS 126 (151)
T ss_pred CEEEEEEEECCCCCCCCEEEEEEEeHHHhccCCccccCCccCceEEEeecC
Confidence 4899999999988889999999999997642 2 1 66666643
No 86
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins. KIAA proteins are uncharacterized human proteins. They were compiled by the Kazusa mammalian cDNA project which identified more than 2000 human genes. They are identified by 4 digit codes that precede the KIAA designation. Many KIAA genes are still functionally uncharacterized including KIAA1228. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1
Probab=99.49 E-value=2.7e-13 Score=122.02 Aligned_cols=100 Identities=28% Similarity=0.368 Sum_probs=81.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
....|+|+|++|++|+.. +..+.+||||+|.+.+.+....++||++++++.||+|||+|.|.+...++ ..|.
T Consensus 14 ~~~~L~V~vi~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~~~nP~wne~f~f~i~~~~l~~~~l~ 87 (127)
T cd04030 14 QRQKLIVTVHKCRNLPPC------DSSDIPDPYVRLYLLPDKSKSTRRKTSVKKDNLNPVFDETFEFPVSLEELKRRTLD 87 (127)
T ss_pred CCCEEEEEEEEEECCCCc------cCCCCCCceEEEEEEcCCCCCceEecccccCCCCCEECeEEEEecCHHHhcCCEEE
Confidence 346899999999999642 33467899999999765444567899999999999999999999865433 5799
Q ss_pred EEEEecCCC--CCCcceEEEEEeCcccCCC
Q 008582 508 IEVHEYDMS--EKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 508 f~V~D~d~~--~~dd~iGq~~lpL~~L~~G 535 (561)
|.|||.+.. +++++||++.++|..|..+
T Consensus 88 i~v~~~~~~~~~~~~~iG~~~i~l~~l~~~ 117 (127)
T cd04030 88 VAVKNSKSFLSREKKLLGQVLIDLSDLDLS 117 (127)
T ss_pred EEEEECCcccCCCCceEEEEEEeccccccc
Confidence 999998864 5799999999999998554
No 87
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 id
Probab=99.48 E-value=2.1e-13 Score=125.05 Aligned_cols=103 Identities=23% Similarity=0.271 Sum_probs=81.8
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lr 507 (561)
...+|.|+|+.|++|+.. + .+.+||||+|.+.+......++||++++++.||+|||+|.|.+...++ ..|+
T Consensus 13 ~~~~L~V~V~~a~nL~~~------~-~~~~d~yVkv~l~~~~~~~~~~kT~v~~~~~nP~fnE~F~f~i~~~~l~~~~L~ 85 (137)
T cd08409 13 TLNRLTVVVLRARGLRQL------D-HAHTSVYVKVSLMIHNKVVKTKKTEVVDGAASPSFNESFSFKVTSRQLDTASLS 85 (137)
T ss_pred CCCeEEEEEEEecCCCcc------c-CCCCCeEEEEEEEECCEEeeeeecccEeCCCCCcccceEEEECCHHHhCccEEE
Confidence 456899999999999632 3 456899999999764333346799999999999999999999864433 6799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCC--ceEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQG--IRAV 539 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~G--yR~i 539 (561)
|.|+|.+..+++++||++.++......| ..|+
T Consensus 86 ~~V~~~~~~~~~~~lG~v~ig~~~~~~~~~~~hW 119 (137)
T cd08409 86 LSVMQSGGVRKSKLLGRVVLGPFMYARGKELEHW 119 (137)
T ss_pred EEEEeCCCCCCcceEEEEEECCcccCCChHHHHH
Confidence 9999999888899999999997655444 5554
No 88
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family. This CD contains members of the regulator of G-protein signaling (RGS) family. RGS is a GTPase activating protein which inhibits G-protein mediated signal transduction. The protein is largely cytosolic, but G-protein activation leads to translocation of this protein to the plasma membrane. A nuclear form of this protein has also been described, but its sequence has not been identified. There are multiple alternatively spliced transcript variants in this family with some members having additional domains (ex. PDZ and RGS) downstream of the C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind pho
Probab=99.48 E-value=1.5e-13 Score=123.03 Aligned_cols=97 Identities=16% Similarity=0.225 Sum_probs=79.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
..|.|+|+.|.+|+.. + .+.+||||+|.+...+....++||+++.++.||+|||+|.|.+...++ ..|.|.|
T Consensus 12 ~~L~V~Vi~ar~L~~~------~-~g~~dpYVkv~l~p~~~~~~~~kT~v~~~t~~P~~nE~F~f~v~~~~~~~~l~v~V 84 (119)
T cd08685 12 RKLTLHVLEAKGLRST------N-SGTCNSYVKISLSPDKEVRFRQKTSTVPDSANPLFHETFSFDVNERDYQKRLLVTV 84 (119)
T ss_pred CEEEEEEEEEECCCCC------C-CCCCCeeEEEEEEeCCCCcceEeCccccCCCCCccccEEEEEcChHHhCCEEEEEE
Confidence 5799999999998632 2 356799999999865555567899999999999999999999865433 3688999
Q ss_pred EecCCCC-CCcceEEEEEeCcccCCC
Q 008582 511 HEYDMSE-KDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 511 ~D~d~~~-~dd~iGq~~lpL~~L~~G 535 (561)
||.+... ++++||.+.+||..+..|
T Consensus 85 ~~~~~~~~~~~~lG~~~i~l~~~~~~ 110 (119)
T cd08685 85 WNKLSKSRDSGLLGCMSFGVKSIVNQ 110 (119)
T ss_pred ECCCCCcCCCEEEEEEEecHHHhccC
Confidence 9988654 478999999999998655
No 89
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular
Probab=99.48 E-value=6.2e-13 Score=118.39 Aligned_cols=118 Identities=25% Similarity=0.328 Sum_probs=90.1
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+...........+.+||||+|.+.+ ...+|+++.++.||.|||+|.|.+..+....|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~d~~~~~~~~g~~dPyv~v~~~~-----~~~kT~~~~~t~~P~W~e~f~~~v~~~~~~~l~i~v~ 75 (121)
T cd08391 1 GVLRIHVIEAQDLVAKDKFVGGLVKGKSDPYVIVRVGA-----QTFKSKVIKENLNPKWNEVYEAVVDEVPGQELEIELF 75 (121)
T ss_pred CeEEEEEEEccCCcccccccccCCCCCcCCEEEEEECC-----EeEEccccCCCCCCcccceEEEEeCCCCCCEEEEEEE
Confidence 35899999999996421000000124679999999864 5789999999999999999999987655678999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-c--eEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-I--RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-y--R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|++.. ++++||++.+++..+..+ . .+.+|.+. ..+.|.++++|
T Consensus 76 d~~~~-~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~-----~~G~~~~~~~~ 121 (121)
T cd08391 76 DEDPD-KDDFLGRLSIDLGSVEKKGFIDEWLPLEDV-----KSGRLHLKLEW 121 (121)
T ss_pred ecCCC-CCCcEEEEEEEHHHhcccCccceEEECcCC-----CCceEEEEEeC
Confidence 99877 799999999999987644 2 57788764 33578888876
No 90
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, s
Probab=99.48 E-value=3.3e-13 Score=123.03 Aligned_cols=97 Identities=26% Similarity=0.448 Sum_probs=79.7
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC--CceeeecccCCCCCCCccccEEEEeeecC----Cce
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSVP----ELA 504 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~--d~~k~kTkvi~nn~nP~WNE~f~F~v~~p----ela 504 (561)
...|+|+|++|++|+.. +..+.+||||+|.+.+... ...++||+++++++||+|||+|.|.+... ...
T Consensus 15 ~~~L~V~Vi~A~~L~~~------~~~g~~dPyv~v~l~~~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~i~~~~~~~~~~ 88 (133)
T cd04009 15 EQSLRVEILNARNLLPL------DSNGSSDPFVKVELLPRHLFPDVPTPKTQVKKKTLFPLFDESFEFNVPPEQCSVEGA 88 (133)
T ss_pred CCEEEEEEEEeeCCCCc------CCCCCCCCEEEEEEECCCcCccccccccccCcCCCCCccCCEEEEEechhhcccCCC
Confidence 35799999999999642 3345689999999975332 24578999999999999999999998642 245
Q ss_pred EEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 505 LLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 505 ~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.|.|.|||++..+++++||++.++|+.|.
T Consensus 89 ~l~~~V~d~d~~~~d~~iG~~~i~l~~l~ 117 (133)
T cd04009 89 LLLFTVKDYDLLGSNDFEGEAFLPLNDIP 117 (133)
T ss_pred EEEEEEEecCCCCCCcEeEEEEEeHHHCC
Confidence 79999999998888999999999999886
No 91
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins. A single C2 domain is found in Smurf proteins, C2-WW-HECT-domain E3s, which play an important role in the downregulation of the TGF-beta signaling pathway. Smurf proteins also regulate cell shape, motility, and polarity by degrading small guanosine triphosphatases (GTPases). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are
Probab=99.48 E-value=3.6e-13 Score=121.13 Aligned_cols=114 Identities=20% Similarity=0.358 Sum_probs=89.5
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
.|+|+|++|++|+. .+.++.+||||+|.+.| ...+||++++++.||.|||+|.|.+.. ...|.|.|||
T Consensus 1 ~l~v~v~~A~~L~~------~~~~~~~dpyv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~--~~~l~i~V~d 68 (123)
T cd08382 1 KVRLTVLCADGLAK------RDLFRLPDPFAVITVDG----GQTHSTDVAKKTLDPKWNEHFDLTVGP--SSIITIQVFD 68 (123)
T ss_pred CeEEEEEEecCCCc------cCCCCCCCcEEEEEECC----ccceEccEEcCCCCCcccceEEEEeCC--CCEEEEEEEE
Confidence 37899999999863 23456789999999864 356789999999999999999999854 5679999999
Q ss_pred cCCCCC--CcceEEEEEeCcccC-C---CceEEEccCCCCCc--ccCeEEEEEE
Q 008582 513 YDMSEK--DDFGGQTCLPVSELK-Q---GIRAVPLHDRKGER--YKSVKLLMHF 558 (561)
Q Consensus 513 ~d~~~~--dd~iGq~~lpL~~L~-~---GyR~ipL~d~~G~~--~~~atLlv~~ 558 (561)
++..++ +++||++.+++..|. . +..|.+|++..... ...++|.+++
T Consensus 69 ~~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~G~v~~~~ 122 (123)
T cd08382 69 QKKFKKKDQGFLGCVRIRANAVLPLKDTGYQRLDLRKLKKSDNLSVRGKIVVSL 122 (123)
T ss_pred CCCCCCCCCceEeEEEEEHHHccccCCCccceeEeecCCCCCCceEeeEEEEEe
Confidence 987654 579999999999974 2 36789997766432 2245787775
No 92
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permu
Probab=99.48 E-value=5.4e-13 Score=120.03 Aligned_cols=120 Identities=21% Similarity=0.298 Sum_probs=93.3
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+.. .....+.+||||+|.+.+ .+.+|++++++.||.|||+|.|.+..+....|.|.||
T Consensus 1 g~l~v~v~~a~~L~~~----~~~~~~~~dPyv~v~~~~-----~~~kT~~~~~t~~P~Wne~f~~~~~~~~~~~l~i~v~ 71 (128)
T cd04024 1 GVLRVHVVEAKDLAAK----DRSGKGKSDPYAILSVGA-----QRFKTQTIPNTLNPKWNYWCEFPIFSAQNQLLKLILW 71 (128)
T ss_pred CEEEEEEEEeeCCCcc----cCCCCCCcCCeEEEEECC-----EEEecceecCCcCCccCCcEEEEecCCCCCEEEEEEE
Confidence 3689999999999632 111146689999998743 5679999999999999999999997655678999999
Q ss_pred ecCCCCCCcceEEEEEeCcccC----CC--ceEEEccCCCCC--cccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELK----QG--IRAVPLHDRKGE--RYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~----~G--yR~ipL~d~~G~--~~~~atLlv~~~f 560 (561)
|++..+++++||++.++|..+. .| -.+.+|.+.... ....++|.++|.|
T Consensus 72 d~~~~~~~~~lG~~~i~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~~~G~i~l~~~~ 128 (128)
T cd04024 72 DKDRFAGKDYLGEFDIALEEVFADGKTGQSDKWITLKSTRPGKTSVVSGEIHLQFSW 128 (128)
T ss_pred ECCCCCCCCcceEEEEEHHHhhcccccCccceeEEccCcccCccccccceEEEEEEC
Confidence 9998778999999999999885 23 356788766322 2345689988875
No 93
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.48 E-value=2.4e-13 Score=119.87 Aligned_cols=99 Identities=20% Similarity=0.175 Sum_probs=82.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC----ceEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE----LALL 506 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe----la~L 506 (561)
...|+|+|+.|++|+ .+.+||||+|.+.+ .++||++++++.||.|||+|.|.+..+. ...|
T Consensus 3 ~~~l~V~v~~a~~L~----------~~~~dpyv~v~~~~-----~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~~~~l 67 (111)
T cd04011 3 DFQVRVRVIEARQLV----------GGNIDPVVKVEVGG-----QKKYTSVKKGTNCPFYNEYFFFNFHESPDELFDKII 67 (111)
T ss_pred cEEEEEEEEEcccCC----------CCCCCCEEEEEECC-----EeeeeeEEeccCCCccccEEEEecCCCHHHHhcCeE
Confidence 357999999999985 24579999999974 4678999999999999999999976543 2579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc------eEEEccCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI------RAVPLHDR 544 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy------R~ipL~d~ 544 (561)
.|.|+|.+..+++++||++.++|+.+..+. +|++|.|+
T Consensus 68 ~i~V~d~~~~~~~~~iG~~~i~l~~v~~~~~~~~~~~w~~L~~~ 111 (111)
T cd04011 68 KISVYDSRSLRSDTLIGSFKLDVGTVYDQPDHAFLRKWLLLTDP 111 (111)
T ss_pred EEEEEcCcccccCCccEEEEECCccccCCCCCcceEEEEEeeCc
Confidence 999999998888999999999999996663 46777663
No 94
>cd04032 C2_Perforin C2 domain of Perforin. Perforin contains a single copy of a C2 domain in its C-terminus and plays a role in lymphocyte-mediated cytotoxicity. Mutations in perforin leads to familial hemophagocytic lymphohistiocytosis type 2. The function of perforin is calcium dependent and the C2 domain is thought to confer this binding to target cell membranes. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few
Probab=99.48 E-value=2.7e-13 Score=122.74 Aligned_cols=93 Identities=29% Similarity=0.375 Sum_probs=78.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCCceEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPELALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pela~Lrf~ 509 (561)
.++|+|+|++|++|+. +..+.+||||+|.+.+ .++||++++++.||+|||+|.|.. ..+....|+|.
T Consensus 27 ~~~L~V~V~~A~~L~~-------d~~g~~DPYVkV~~~~-----~~~kT~vi~~t~nPvWNE~F~f~~~~~~~~~~L~v~ 94 (127)
T cd04032 27 LATLTVTVLRATGLWG-------DYFTSTDGYVKVFFGG-----QEKRTEVIWNNNNPRWNATFDFGSVELSPGGKLRFE 94 (127)
T ss_pred cEEEEEEEEECCCCCc-------CcCCCCCeEEEEEECC-----ccccCceecCCCCCcCCCEEEEecccCCCCCEEEEE
Confidence 3689999999999963 2346679999999864 378999999999999999999974 34456789999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCC
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|||++..+++++||++.++|...-.+
T Consensus 95 V~D~d~~s~dd~IG~~~i~l~~~~~~ 120 (127)
T cd04032 95 VWDRDNGWDDDLLGTCSVVPEAGVHE 120 (127)
T ss_pred EEeCCCCCCCCeeEEEEEEecCCcee
Confidence 99999888899999999999866544
No 95
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synap
Probab=99.47 E-value=9e-13 Score=118.57 Aligned_cols=113 Identities=22% Similarity=0.364 Sum_probs=87.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
.|+|+|++|++|+.. +..+.+||||+|.+.+. .....||+++.++.||.|||+|.|.+..+....|.|.|||
T Consensus 2 ~~~V~v~~a~~L~~~------~~~~~~Dpyv~v~~~~~--~~~~~kT~~~~~t~~P~Wne~f~f~i~~~~~~~L~i~v~d 73 (126)
T cd04043 2 LFTIRIVRAENLKAD------SSNGLSDPYVTLVDTNG--KRRIAKTRTIYDTLNPRWDEEFELEVPAGEPLWISATVWD 73 (126)
T ss_pred EEEEEEEEeECCCCC------CCCCCCCceEEEEECCC--CeeeecccEecCCCCCcccceEEEEcCCCCCCEEEEEEEE
Confidence 589999999999642 33467899999986532 1345799999999999999999999876555789999999
Q ss_pred cCCCCCCcceEEEEEeCcccCC---Cc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 513 YDMSEKDDFGGQTCLPVSELKQ---GI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 513 ~d~~~~dd~iGq~~lpL~~L~~---Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
.+..+++++||++.++|..+.. |. ++++|.. +| .+.+++.+
T Consensus 74 ~d~~~~~~~iG~~~i~l~~~~~~~~~~~~~~w~~l~~-~g------~i~l~~~~ 120 (126)
T cd04043 74 RSFVGKHDLCGRASLKLDPKRFGDDGLPREIWLDLDT-QG------RLLLRVSM 120 (126)
T ss_pred CCCCCCCceEEEEEEecCHHHcCCCCCCceEEEEcCC-CC------eEEEEEEE
Confidence 9988789999999999987532 32 4667753 33 56666654
No 96
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.47 E-value=3e-13 Score=124.31 Aligned_cols=114 Identities=18% Similarity=0.250 Sum_probs=87.2
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-CceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
..++|.|+|+.|.+|+. .+..+.+||||+|.+..... ...++||++++++.||+|||+|.|.+...++ ..|
T Consensus 13 ~~~~L~V~VikarnL~~------~~~~~~~dpyVkv~llp~~~~~~~~~kT~v~~~t~nPvfnEtF~f~i~~~~l~~~~L 86 (138)
T cd08408 13 LTGRLSVEVIKGSNFKN------LAMNKAPDTYVKLTLLNSDGQEISKSKTSIRRGQPDPEFKETFVFQVALFQLSEVTL 86 (138)
T ss_pred CCCeEEEEEEEecCCCc------cccCCCCCeeEEEEEEeCCCcceeeccceeecCCCCCcEeeeEEEECCHHHhCccEE
Confidence 45689999999999964 23345689999999964222 1246799999999999999999999875444 589
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCC-CceEE-EccCCCCCcc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQ-GIRAV-PLHDRKGERY 549 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~-GyR~i-pL~d~~G~~~ 549 (561)
.|.|+|.+..+++++||++.+++..... +..|+ .|++..++++
T Consensus 87 ~~~V~~~~~~~~~~~iG~v~l~~~~~~~~~~~hW~~~l~~~~~~v 131 (138)
T cd08408 87 MFSVYNKRKMKRKEMIGWFSLGLNSSGEEEEEHWNEMKESKGQQV 131 (138)
T ss_pred EEEEEECCCCCCCcEEEEEEECCcCCCchHHHHHHHHHhCCCCEE
Confidence 9999999988899999999999987754 33333 5555555543
No 97
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. Synaptotagmin 7, a member of class 2 synaptotagmins, is located in presynaptic plasma membranes in neurons, dense-core vesicles in endocrine cells, and lysosomes in fibroblasts. It has been shown to play a role in regulation of Ca2+-dependent lysosomal exocytosis in fibroblasts and may also function as a vesicular Ca2+-sensor. It is distinguished from the other synaptotagmins by having over 12 splice forms. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic ves
Probab=99.47 E-value=6.7e-13 Score=119.23 Aligned_cols=99 Identities=21% Similarity=0.286 Sum_probs=79.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec---CCceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~L 506 (561)
....|+|+|++|++|+.. +..+..||||+|.+.. .+..+.||++++++.||+|||+|.|.+.. .....|
T Consensus 14 ~~~~L~v~v~~a~~L~~~------d~~~~~dpyv~v~~~~--~~~~~~kT~v~~~t~~P~Wne~f~f~~~~~~~l~~~~l 85 (125)
T cd08386 14 QESTLTLKILKAVELPAK------DFSGTSDPFVKIYLLP--DKKHKLETKVKRKNLNPHWNETFLFEGFPYEKLQQRVL 85 (125)
T ss_pred CCCEEEEEEEEecCCCCc------cCCCCCCceEEEEECC--CCCcceeeeeecCCCCCccceeEEEcccCHHHhCCCEE
Confidence 346899999999999632 3345679999999853 33456799999999999999999997532 223579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
.|.|||+|..+++++||++.++|+.+..|-
T Consensus 86 ~~~v~d~d~~~~~~~iG~~~i~l~~l~~~~ 115 (125)
T cd08386 86 YLQVLDYDRFSRNDPIGEVSLPLNKVDLTE 115 (125)
T ss_pred EEEEEeCCCCcCCcEeeEEEEecccccCCC
Confidence 999999998888999999999999987663
No 98
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=99.47 E-value=1.2e-13 Score=127.88 Aligned_cols=92 Identities=28% Similarity=0.454 Sum_probs=79.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|+.|.+|.. .|..+.+||||.+.+.+ ++.||+++.+|.||+|||.|+|.+..+. ..|.+.||
T Consensus 6 GLL~v~v~~g~~L~~------rD~~~sSDPyVVl~lg~-----q~lkT~~v~~n~NPeWNe~ltf~v~d~~-~~lkv~Vy 73 (168)
T KOG1030|consen 6 GLLRVRVKRGKNLAI------RDFLGSSDPYVVLELGN-----QKLKTRVVYKNLNPEWNEELTFTVKDPN-TPLKVTVY 73 (168)
T ss_pred eEEEEEEEeecCeee------eccccCCCCeEEEEECC-----eeeeeeeecCCCCCcccceEEEEecCCC-ceEEEEEE
Confidence 579999999999853 23336789999999875 6889999999999999999999998774 46899999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|+|..+.||++|.+.|||..+..+
T Consensus 74 D~D~fs~dD~mG~A~I~l~p~~~~ 97 (168)
T KOG1030|consen 74 DKDTFSSDDFMGEATIPLKPLLEA 97 (168)
T ss_pred eCCCCCcccccceeeeccHHHHHH
Confidence 999999999999999999987654
No 99
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16. Synaptotagmin 14 and 16 are membrane-trafficking proteins in specific tissues outside the brain. Both of these contain C-terminal tandem C2 repeats, but only Synaptotagmin 14 has an N-terminal transmembrane domain and a putative fatty-acylation site. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium and this is indeed the case here. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicle
Probab=99.46 E-value=7e-13 Score=119.53 Aligned_cols=97 Identities=22% Similarity=0.271 Sum_probs=78.3
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eecCC--ceEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSVPE--LALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~pe--la~L 506 (561)
...+|.|+|+.|++|+.. +..+..||||++.+.+ ....++||+++++ .||+|||+|.|. +...+ ...|
T Consensus 14 ~~~~L~V~Vi~a~nL~~~------~~~~~~d~yVk~~llp--~~~~~~kTkv~~~-~nP~fnE~F~f~~i~~~~l~~~~L 84 (124)
T cd08389 14 SARKLTVTVIRAQDIPTK------DRGGASSWQVHLVLLP--SKKQRAKTKVQRG-PNPVFNETFTFSRVEPEELNNMAL 84 (124)
T ss_pred CCCEEEEEEEEecCCCch------hcCCCCCcEEEEEEcc--CCcceeecccccC-CCCcccCEEEECCCCHHHhccCEE
Confidence 446899999999999642 2245579999987754 3346789999887 999999999998 54332 3579
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
+|.|+|++..+++++||++.+||+.+..+
T Consensus 85 ~~~V~~~~~~~~~~~lG~~~i~L~~l~~~ 113 (124)
T cd08389 85 RFRLYGVERMRKERLIGEKVVPLSQLNLE 113 (124)
T ss_pred EEEEEECCCcccCceEEEEEEeccccCCC
Confidence 99999999888899999999999998765
No 100
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3. RasA2 and RasA3 are GAP1s (GTPase activating protein 1s ), Ras-specific GAP members, which suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. RasA2 and RasA3 are both inositol 1,3,4,5-tetrakisphosphate-binding proteins and contain an N-terminal C2 domain, a Ras-GAP domain, a pleckstrin-homology (PH) domain which localizes it to the plasma membrane, and Bruton's Tyrosine Kinase (BTK) a zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular p
Probab=99.46 E-value=1e-12 Score=118.01 Aligned_cols=115 Identities=19% Similarity=0.278 Sum_probs=87.7
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|+.|.+|+... ...+..||||+|.+.+ ....||++++++.||+|||+|.|.+... ...|.|.|||+
T Consensus 2 l~v~v~~a~~L~~~~-----~~~g~sDpYv~v~l~~----~~~~kT~v~~kt~~P~WnE~F~f~v~~~-~~~l~~~v~d~ 71 (121)
T cd08401 2 LKIKIGEAKNLPPRS-----GPNKMRDCYCTVNLDQ----EEVFRTKTVEKSLCPFFGEDFYFEIPRT-FRHLSFYIYDR 71 (121)
T ss_pred eEEEEEEccCCCCCC-----CCCCCcCcEEEEEECC----ccEEEeeEEECCCCCccCCeEEEEcCCC-CCEEEEEEEEC
Confidence 789999999996420 1124679999999843 2357899999999999999999998643 35799999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCc---eEEEccC--CCCCcccCeEEEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGI---RAVPLHD--RKGERYKSVKLLMHFEF 560 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d--~~G~~~~~atLlv~~~f 560 (561)
+..+++++||.+.++++.+..|. .|.+|.- ..++ ..+.|++.+.|
T Consensus 72 ~~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~--~~G~i~l~~~~ 121 (121)
T cd08401 72 DVLRRDSVIGKVAIKKEDLHKYYGKDTWFPLQPVDADSE--VQGKVHLELRL 121 (121)
T ss_pred CCCCCCceEEEEEEEHHHccCCCCcEeeEEEEccCCCCc--ccEEEEEEEEC
Confidence 98888999999999999987543 4667753 3333 35677776654
No 101
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.46 E-value=6.2e-14 Score=117.37 Aligned_cols=76 Identities=32% Similarity=0.552 Sum_probs=65.8
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCCCCCCCC
Q 008582 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDINPPLSP 103 (561)
Q Consensus 26 ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~n~~~~~ 103 (561)
||..||.+|+++ +.||.++|++||+++|++..++.++|.+||.+|++.. ....+..||++||++||+|++|.+++|
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~--~~~~~~~lt~~gF~~fL~S~~N~~~~~ 77 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDE--RNRQKGQLTLEGFTRFLFSDENSIFDP 77 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHH--HHHCTTEEEHHHHHHHHHSTTCBSS-H
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccch--hhcccCCcCHHHHHHHHCCCcCCCCCh
Confidence 799999999986 9999999999999999998889999999999998432 123457899999999999999999986
No 102
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins. SRC2 production is a response to pathogen infiltration. The initial response of increased Ca2+ concentrations are coupled to downstream signal transduction pathways via calcium binding proteins. SRC2 contains a single C2 domain which localizes to the plasma membrane and is involved in Ca2+ dependent protein binding. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such
Probab=99.45 E-value=3.4e-13 Score=121.25 Aligned_cols=108 Identities=27% Similarity=0.326 Sum_probs=88.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCC----ceEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE----LALLR 507 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pe----la~Lr 507 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ ..+++|+++.+ +.||.|||+|.|.+..++ ...|.
T Consensus 1 ~L~V~V~sA~~L~~~------~~~~~~dpYv~v~~~~----~~~~~T~~~~~~~~~P~Wne~f~f~v~~~~~~~~~~~l~ 70 (125)
T cd04051 1 TLEITIISAEDLKNV------NLFGKMKVYAVVWIDP----SHKQSTPVDRDGGTNPTWNETLRFPLDERLLQQGRLALT 70 (125)
T ss_pred CEEEEEEEcccCCCC------CcccCCceEEEEEECC----CcccccccccCCCCCCCCCCEEEEEcChHhcccCccEEE
Confidence 489999999999642 3346789999999975 24678998764 699999999999987664 57899
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCce--------EEEccCCCCCccc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR--------AVPLHDRKGERYK 550 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR--------~ipL~d~~G~~~~ 550 (561)
|.|||.+..+++++||++.+||..+..+.+ +.+|.+++|++-+
T Consensus 71 ~~v~d~~~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~~~~~l~~~~g~~~G 121 (125)
T cd04051 71 IEVYCERPSLGDKLIGEVRVPLKDLLDGASPAGELRFLSYQLRRPSGKPQG 121 (125)
T ss_pred EEEEECCCCCCCCcEEEEEEEHHHhhcccCCCCcceeEEEEeECCCCCcCe
Confidence 999999876789999999999999876553 4688888888653
No 103
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrev
Probab=99.45 E-value=1.3e-12 Score=118.21 Aligned_cols=114 Identities=29% Similarity=0.418 Sum_probs=89.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE 512 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D 512 (561)
+|+|+|++|++|+.. +..+.+||||+|.+.+ .+.+|+++.++.||.|||+|.|.+..+ ...|.|.|||
T Consensus 2 ~L~V~vi~a~~L~~~------d~~g~~DPyv~v~~~~-----~~~kT~~v~~t~~P~Wne~f~f~~~~~-~~~l~i~v~d 69 (127)
T cd04027 2 KISITVVCAQGLIAK------DKTGTSDPYVTVQVGK-----TKKRTKTIPQNLNPVWNEKFHFECHNS-SDRIKVRVWD 69 (127)
T ss_pred eEEEEEEECcCCcCC------CCCCCcCcEEEEEECC-----EeeecceecCCCCCccceEEEEEecCC-CCEEEEEEEE
Confidence 689999999999642 3346689999999842 467999999999999999999988654 3468999999
Q ss_pred cCCC-----------CCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEE
Q 008582 513 YDMS-----------EKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHF 558 (561)
Q Consensus 513 ~d~~-----------~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~ 558 (561)
+|.. +.+++||++.+++..+..+. .|.+|....+.....+.|.++|
T Consensus 70 ~d~~~~~~~~~~~~~~~~~~iG~~~i~l~~~~~~~~~w~~L~~~~~~~~~~G~i~~~~ 127 (127)
T cd04027 70 EDDDIKSRLKQKFTRESDDFLGQTIIEVRTLSGEMDVWYNLEKRTDKSAVSGAIRLHI 127 (127)
T ss_pred CCCCcccccceeccccCCCcceEEEEEhHHccCCCCeEEECccCCCCCcEeEEEEEEC
Confidence 8842 46899999999999886555 4568876555544566787764
No 104
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.45 E-value=1.1e-12 Score=117.39 Aligned_cols=119 Identities=22% Similarity=0.217 Sum_probs=92.3
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+... ...+.+||||+|.+.+. ....||+++.++.||.|||.|.|.+. +....|.|.||
T Consensus 2 g~l~v~v~~a~~L~~~~-----~~~~~~dpyv~v~~~~~---~~~~kT~~~~~~~~P~Wne~~~~~v~-~~~~~l~~~v~ 72 (124)
T cd04044 2 GVLAVTIKSARGLKGSD-----IIGGTVDPYVTFSISNR---RELARTKVKKDTSNPVWNETKYILVN-SLTEPLNLTVY 72 (124)
T ss_pred eEEEEEEEcccCCCccc-----ccCCCCCCeEEEEECCC---CcceEeeeecCCCCCcceEEEEEEeC-CCCCEEEEEEE
Confidence 46899999999996310 11245799999999752 35679999999999999999999987 44567999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCceE---EEccCCCCCcccCeEEEEEEEEC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGIRA---VPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~GyR~---ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
|.+..+++++||++.++|..+..+..+ .......|++. ++|.|.++|+
T Consensus 73 d~~~~~~d~~iG~~~~~l~~l~~~~~~~~~~~~~~~~~k~~--G~i~~~l~~~ 123 (124)
T cd04044 73 DFNDKRKDKLIGTAEFDLSSLLQNPEQENLTKNLLRNGKPV--GELNYDLRFF 123 (124)
T ss_pred ecCCCCCCceeEEEEEEHHHhccCccccCcchhhhcCCccc--eEEEEEEEeC
Confidence 998877899999999999998765432 23334566653 5899988885
No 105
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. There are several classes of Synaptotagmins. Previously all synaptotagmins were thought to be calcium sensors in the regulation of neurotransmitter release and hormone secretion, but it has been shown that not all of them bind calcium. Of the 17 identified synaptotagmins only 8 bind calcium (1-3, 5-7, 9, 10). The function of the two C2 domains that bind calcium are: regulating the fusion step of synaptic vesicle exocytosis (C2A) and binding to phosphatidyl-inositol-3,4,5-triphosphate (PIP3) in the absence of calcium ions and to phosphatidylinositol bisphosphate (PIP2) in their presence (C2B). C2B also regulates also the recycling step of synaptic vesicles. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distin
Probab=99.44 E-value=2.2e-13 Score=123.44 Aligned_cols=114 Identities=19% Similarity=0.186 Sum_probs=91.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--ceEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--LALLR 507 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--la~Lr 507 (561)
..+.|.|+|++|++|+.. +..+.+||||+|.+.+......+++|+++.++.||.|||+|.|.+..+. ...|+
T Consensus 12 ~~~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~l~~~~~~~~~~~T~~~~~~~~P~wne~f~f~i~~~~l~~~~l~ 85 (134)
T cd00276 12 TAERLTVVVLKARNLPPS------DGKGLSDPYVKVSLLQGGKKLKKKKTSVKKGTLNPVFNEAFSFDVPAEQLEEVSLV 85 (134)
T ss_pred CCCEEEEEEEEeeCCCCc------cCCCCCCcEEEEEEEcCCeEeeeecCcceecCCCCeeeeeEEEECCHHHhCCcEEE
Confidence 346899999999999642 2345689999999976544445779999999999999999999987654 46799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCce-EEEccCCCCCcc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGIR-AVPLHDRKGERY 549 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~GyR-~ipL~d~~G~~~ 549 (561)
|.|||.+..+++++||++.++++....+.. |.+|.+..|+++
T Consensus 86 ~~v~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~ 128 (134)
T cd00276 86 ITVVDKDSVGRNEVIGQVVLGPDSGGEELEHWNEMLASPRKPI 128 (134)
T ss_pred EEEEecCCCCCCceeEEEEECCCCCCcHHHHHHHHHhCCCCce
Confidence 999999877789999999999999444444 448887777764
No 106
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangeme
Probab=99.44 E-value=1.4e-12 Score=119.18 Aligned_cols=115 Identities=23% Similarity=0.413 Sum_probs=88.2
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-C--------Cc
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-P--------EL 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-p--------el 503 (561)
.|+|+|++|++|+. .+..+.+||||+|.+.+ .++||++++++.||.|||+|.|.+.. + +.
T Consensus 2 ~l~v~V~~a~~L~~------~d~~g~~dpyv~v~~~~-----~~~kT~v~~~t~nP~Wne~~~f~~~~~~~~~~~~~~~~ 70 (135)
T cd04017 2 QLRAYIYQARDLLA------ADKSGLSDPFARVSFLN-----QSQETEVIKETLSPTWDQTLIFDEVELYGSPEEIAQNP 70 (135)
T ss_pred EEEEEEEEeecCcC------CCCCCCCCCEEEEEECC-----eeeEeeeEcCCCCCccCcEEEEeeeeccCChHHhhcCC
Confidence 58999999999963 23456789999999864 57799999999999999999997531 1 12
Q ss_pred eEEEEEEEecCCCCCCcceEEEEE-eCcccCC---C---ceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 504 ALLRIEVHEYDMSEKDDFGGQTCL-PVSELKQ---G---IRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 504 a~Lrf~V~D~d~~~~dd~iGq~~l-pL~~L~~---G---yR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
..|.|.|||+|..+++++||++.+ |+..++. + -+|.+|.. .|. ..+.|+|.|+++
T Consensus 71 ~~l~v~V~d~d~~~~d~~iG~~~i~~~~~~~~~~~~~~~~~W~~L~~-~~~--~~Geil~~~~~~ 132 (135)
T cd04017 71 PLVVVELFDQDSVGKDEFLGRSVAKPLVKLDLEEDFPPKLQWFPIYK-GGQ--SAGELLAAFELI 132 (135)
T ss_pred CEEEEEEEeCcCCCCCccceEEEeeeeeecccCCCCCCCceEEEeec-CCC--chhheeEEeEEE
Confidence 468999999998888999999986 6655542 2 26788863 343 345899999874
No 107
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon. A single C2 domain is found in PKC epsilon. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1 (alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=99.44 E-value=1.8e-12 Score=117.90 Aligned_cols=116 Identities=24% Similarity=0.209 Sum_probs=88.1
Q ss_pred ceEEEEEEEecCCCCCCCCCc--c--CCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTH--F--DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~--~--~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lr 507 (561)
+.|+|+|+.|++|........ + ...+.+||||+|.+.+ ....+|+++.++.||.|||+|.|.+. +...|.
T Consensus 4 g~l~V~v~~a~~L~~~d~~~~~~~~~~~~g~~dpyv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~--~~~~l~ 77 (132)
T cd04014 4 GTLKIKICEAVDLKPTDWSTRHAVPKKGSQLLDPYVSIDVDD----THIGKTSTKPKTNSPVWNEEFTTEVH--NGRNLE 77 (132)
T ss_pred eEEEEEEEEecCCCCCCchhhhcccccCccCcCcEEEEEECC----EEEeEEeEcCCCCCCCcceeEEEEcC--CCCEEE
Confidence 579999999999963210000 0 0124679999999864 23468999988999999999999985 456799
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCC-----CceEEEccCCCCCcccCeEEEEEEEE
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQ-----GIRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~-----GyR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|+|.+..+++++||++.++|+.+.. +-.+++|. + .+.|+|++.|
T Consensus 78 ~~v~d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~w~~L~-~------~G~l~l~~~~ 128 (132)
T cd04014 78 LTVFHDAAIGPDDFVANCTISFEDLIQRGSGSFDLWVDLE-P------QGKLHVKIEL 128 (132)
T ss_pred EEEEeCCCCCCCceEEEEEEEhHHhcccCCCcccEEEEcc-C------CcEEEEEEEE
Confidence 999998877789999999999998876 24677885 2 3478888776
No 108
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4. Rasal1 and RasA4 are both members of GAP1 (GTPase activating protein 1). Rasal1 responds to repetitive Ca2+ signals by associating with the plasma membrane and deactivating Ras. RasA4 suppresses Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. Both of these proteins contains two C2 domains, a Ras-GAP domain, a plextrin homology (PH)-like domain, and a Bruton's Tyrosine Kinase (BTK) zinc binding domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins.
Probab=99.44 E-value=1.6e-12 Score=116.59 Aligned_cols=114 Identities=18% Similarity=0.236 Sum_probs=86.5
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|+.|++|+.. +..+..||||+|.+.+ ....||+++.++.||.|||.|.|.+... ...|.|.|||+
T Consensus 2 l~v~vi~a~~L~~~------d~~g~~DPYv~v~~~~----~~~~kT~v~~~t~nP~Wne~f~~~~~~~-~~~l~v~v~d~ 70 (121)
T cd04054 2 LYIRIVEGKNLPAK------DITGSSDPYCIVKVDN----EVIIRTATVWKTLNPFWGEEYTVHLPPG-FHTVSFYVLDE 70 (121)
T ss_pred EEEEEEEeeCCcCC------CCCCCCCceEEEEECC----EeeeeeeeEcCCCCCcccceEEEeeCCC-CCEEEEEEEEC
Confidence 78999999998642 3346689999999854 2346999999999999999999997533 36799999999
Q ss_pred CCCCCCcceEEEEEeCcccCCC----ceEEEccCCCCCcccCeEEEEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG----IRAVPLHDRKGERYKSVKLLMHF 558 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G----yR~ipL~d~~G~~~~~atLlv~~ 558 (561)
+..+++++||++.+++..+..+ ..|++|....+..-..+.|++.+
T Consensus 71 ~~~~~d~~iG~~~~~~~~~~~~~~~~~~W~~L~~~~~~~~~~G~i~l~~ 119 (121)
T cd04054 71 DTLSRDDVIGKVSLTREVISAHPRGIDGWMNLTEVDPDEEVQGEIHLEL 119 (121)
T ss_pred CCCCCCCEEEEEEEcHHHhccCCCCCCcEEECeeeCCCCccccEEEEEE
Confidence 9888899999999999877643 35788864322211234666654
No 109
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4. All Slp members basically share an N-terminal Slp homology domain (SHD) and C-terminal tandem C2 domains (named the C2A domain and the C2B domain) with the SHD and C2 domains being separated by a linker sequence of various length. Slp1/JFC1 and Slp2/exophilin 4 promote granule docking to the plasma membrane. Additionally, their C2A domains are both Ca2+ independent, unlike the case in Slp3 and Slp4/granuphilin in which their C2A domains are Ca2+ dependent. It is thought that SHD (except for the Slp4-SHD) functions as a specific Rab27A/B-binding domain. In addition to Slps, rabphilin, Noc2, and Munc13-4 also function as Rab27-binding proteins. It has been demonstrated that Slp3 and Slp4/granuphilin promote dense-core vesicle exocytosis. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involvin
Probab=99.43 E-value=9.5e-13 Score=124.24 Aligned_cols=98 Identities=21% Similarity=0.249 Sum_probs=79.9
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC-Cc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP-EL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p-el--a~L 506 (561)
..+.|.|+|++|.+|+.. +..+.+||||+|.+........++||++++++.||+|||+|.|.+..+ ++ ..|
T Consensus 25 ~~g~L~V~Vi~A~nL~~~------d~~g~~DPYVkv~l~~~~~~~~~~kT~vi~~t~nP~WnE~f~f~~~~~~~l~~~~L 98 (162)
T cd04020 25 STGELHVWVKEAKNLPAL------KSGGTSDSFVKCYLLPDKSKKSKQKTPVVKKSVNPVWNHTFVYDGVSPEDLSQACL 98 (162)
T ss_pred CCceEEEEEEeeeCCCCC------CCCCCCCCEEEEEEEcCCCCCcceeCCccCCCCCCCCCCEEEEecCCHHHhCCCEE
Confidence 457899999999999742 234678999999986544445678999999999999999999985422 22 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.|.|||++..+++++||++.+++..+.
T Consensus 99 ~i~V~d~d~~~~d~~lG~v~i~l~~~~ 125 (162)
T cd04020 99 ELTVWDHDKLSSNDFLGGVRLGLGTGK 125 (162)
T ss_pred EEEEEeCCCCCCCceEEEEEEeCCccc
Confidence 999999998888999999999999874
No 110
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17. Synaptotagmin is a membrane-trafficking protein characterized by a N-terminal transmembrane region, a linker, and 2 C-terminal C2 domains. It is thought to be involved in the trafficking and exocytosis of secretory vesicles in non-neuronal tissues and is Ca2+ independent. Human synaptotagmin 15 has 2 alternatively spliced forms that encode proteins with different C-termini. The larger, SYT15a, contains a N-terminal TM region, a putative fatty-acylation site, and 2 tandem C terminal C2 domains. The smaller, SYT15b, lacks the C-terminal portion of the second C2 domain. Unlike most other synaptotagmins it is nearly absent in the brain and rather is found in the heart, lungs, skeletal muscle, and testis. Synaptotagmin 17 is located in the brain, kidney, and prostate and is thought to be a peripheral membrane protein. Previously all synaptotagmins were thought to be calcium sensors in the regulat
Probab=99.43 E-value=1e-12 Score=117.57 Aligned_cols=104 Identities=19% Similarity=0.231 Sum_probs=82.8
Q ss_pred CCceEEEEEEEecCCCCCCCCCccC-CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFD-AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~-~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~L 506 (561)
..+.|.|+|++|++|+.. + ..+.+||||+|.+.. .+...++|++++++.||+|||+|.|.+...++ ..|
T Consensus 12 ~~~~L~V~v~~a~~L~~~------~~~~~~~dpyV~v~l~~--~~~~~~~T~v~~~~~~P~wne~f~f~i~~~~l~~~~l 83 (123)
T cd08390 12 EEEQLTVSLIKARNLPPR------TKDVAHCDPFVKVCLLP--DERRSLQSKVKRKTQNPNFDETFVFQVSFKELQRRTL 83 (123)
T ss_pred CCCEEEEEEEEecCCCCc------cCCCCCCCcEEEEEEee--CCCCceEeeeEcCCCCCccceEEEEEcCHHHhcccEE
Confidence 346899999999999642 2 245679999999853 33456789999999999999999999865433 469
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPL 541 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL 541 (561)
+|.|||.+..+++++||++.++|+.+..+. .|.+|
T Consensus 84 ~i~v~d~~~~~~~~~iG~~~i~L~~l~~~~~~~~w~~L 121 (123)
T cd08390 84 RLSVYDVDRFSRHCIIGHVLFPLKDLDLVKGGVVWRDL 121 (123)
T ss_pred EEEEEECCcCCCCcEEEEEEEeccceecCCCceEEEeC
Confidence 999999998778999999999999987554 44555
No 111
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma. A single C2 domain is found in PKC alpha and gamma. The PKC family of serine/threonine kinases regulates apoptosis, proliferation, migration, motility, chemo-resistance, and differentiation. There are 3 groups: group 1(alpha, betaI, beta II, gamma) which require phospholipids and calcium, group 2 (delta, epsilon, theta, eta) which do not require calcium for activation, and group 3 (xi, iota/lambda) which are atypical and can be activated in the absence of diacylglycerol and calcium. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transd
Probab=99.43 E-value=1.7e-12 Score=117.71 Aligned_cols=108 Identities=29% Similarity=0.392 Sum_probs=87.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC-ceEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE-LALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe-la~Lrf~V 510 (561)
..|+|+|++|++|+.. +..+..||||+|.+.+.+.+..++||+++.++.||.|||+|.|.+...+ ...|+|.|
T Consensus 13 ~~l~v~i~~a~nL~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~wne~f~~~~~~~~~~~~l~v~v 86 (131)
T cd04026 13 NKLTVEVREAKNLIPM------DPNGLSDPYVKLKLIPDPKNETKQKTKTIKKTLNPVWNETFTFDLKPADKDRRLSIEV 86 (131)
T ss_pred CEEEEEEEEeeCCCCc------CCCCCCCCcEEEEEEcCCCCCceecceeecCCCCCCccceEEEeCCchhcCCEEEEEE
Confidence 5799999999999642 2235679999999987666667889999999999999999999986543 35799999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCC--ceEEEccCCC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQG--IRAVPLHDRK 545 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~G--yR~ipL~d~~ 545 (561)
||.+..+++++||++.++|+.+..+ -.|.+|.+.+
T Consensus 87 ~d~~~~~~~~~iG~~~~~l~~l~~~~~~~w~~L~~~~ 123 (131)
T cd04026 87 WDWDRTTRNDFMGSLSFGVSELIKMPVDGWYKLLNQE 123 (131)
T ss_pred EECCCCCCcceeEEEEEeHHHhCcCccCceEECcCcc
Confidence 9998877899999999999988643 3567887643
No 112
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1). Freud-1 is a novel calcium-regulated repressor that negatively regulates basal 5-HT1A receptor expression in neurons. It may also play a role in the altered regulation of 5-HT1A receptors associated with anxiety or major depression. Freud-1 contains two DM-14 basic repeats, a helix-loop-helix DNA binding domain, and a C2 domain. The Freud-1 C2 domain is thought to be calcium insensitive and it lacks several acidic residues that mediate calcium binding of the PKC C2 domain. In addition, it contains a poly-basic insert that is not present in calcium-dependent C2 domains and may function as a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules tha
Probab=99.42 E-value=4.8e-12 Score=118.22 Aligned_cols=121 Identities=21% Similarity=0.209 Sum_probs=87.7
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC--------ceE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE--------LAL 505 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe--------la~ 505 (561)
..++|..+.+++++. ....+..||||++++.-......+.||++++++.||+|||+|.|.|.... -..
T Consensus 4 ~el~i~~~~~~~l~~----~~~~~~~DpYVk~~l~~p~~~~~k~KT~v~k~TlnPvfNE~f~f~I~~~~~~~~R~l~~~~ 79 (155)
T cd08690 4 IELTIVRCIGIPLPS----GWNPKDLDTYVKFEFPYPNEEPQSGKTSTIKDTNSPEYNESFKLNINRKHRSFQRVFKRHG 79 (155)
T ss_pred eEEEEEEeeccccCC----CcCCCCCCeEEEEEEecCCCCCceeecCcccCCCCCcccceEEEEeccccchhhhhccCCc
Confidence 345566666543221 12234579999999853334556889999999999999999999985432 135
Q ss_pred EEEEEEecCCC-CCCcceEEEEEeCcccCCC--c-eEEEccCCCCCcccCeEEEEEEEE
Q 008582 506 LRIEVHEYDMS-EKDDFGGQTCLPVSELKQG--I-RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 506 Lrf~V~D~d~~-~~dd~iGq~~lpL~~L~~G--y-R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.|.|||++.. .+|++||++.++|+.|..+ . .+++|++ |...-|+.|-|++..
T Consensus 80 L~~~V~d~~~f~~~D~~iG~~~i~L~~l~~~~~~~~~~~L~~--~~k~~Gg~l~v~ir~ 136 (155)
T cd08690 80 LKFEVYHKGGFLRSDKLLGTAQVKLEPLETKCEIHESVDLMD--GRKATGGKLEVKVRL 136 (155)
T ss_pred EEEEEEeCCCcccCCCeeEEEEEEcccccccCcceEEEEhhh--CCCCcCCEEEEEEEe
Confidence 89999999864 4699999999999999443 3 3668886 555667799988753
No 113
>cd04046 C2_Calpain C2 domain present in Calpain proteins. A single C2 domain is found in calpains (EC 3.4.22.52, EC 3.4.22.53), calcium-dependent, non-lysosomal cysteine proteases. Caplains are classified as belonging to Clan CA by MEROPS and include six families: C1, C2, C10, C12, C28, and C47. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of pic
Probab=99.41 E-value=6.6e-12 Score=113.35 Aligned_cols=114 Identities=21% Similarity=0.270 Sum_probs=88.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|+|+|++|++|.. .+..+.+||||+|.+.+ .+.||++++++.||.|||.|.|.+..+ ...|.|.||
T Consensus 3 ~~~~V~v~~A~~L~~------~d~~g~~dPyv~v~~~~-----~~~kT~v~~~t~nP~Wne~f~f~~~~~-~~~l~i~V~ 70 (126)
T cd04046 3 VVTQVHVHSAEGLSK------QDSGGGADPYVIIKCEG-----ESVRSPVQKDTLSPEFDTQAIFYRKKP-RSPIKIQVW 70 (126)
T ss_pred EEEEEEEEeCcCCCC------CCCCCCcCccEEEEECC-----EEEEeCccCCCCCCcccceEEEEecCC-CCEEEEEEE
Confidence 468999999999853 23456789999998764 467999999999999999999987654 457999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-ceEEEccC----CCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-IRAVPLHD----RKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-yR~ipL~d----~~G~~~~~atLlv~~~f 560 (561)
|++... +++||.+.++++.+..+ +++++|.. .+|+.. ++|.+++.+
T Consensus 71 d~~~~~-d~~lG~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~--G~i~~~~~~ 121 (126)
T cd04046 71 NSNLLC-DEFLGQATLSADPNDSQTLRTLPLRKRGRDAAGEVP--GTISVKVTS 121 (126)
T ss_pred ECCCCC-CCceEEEEEecccCCCcCceEEEcccCCCCCCCCCC--CEEEEEEEE
Confidence 998764 89999999999876544 57888852 344432 467776654
No 114
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain. Rabphilin is found neurons and in neuroendrocrine cells, while Doc2 is found not only in the brain but in tissues, including mast cells, chromaffin cells, and osteoblasts. Rabphilin and Doc2s share highly homologous tandem C2 domains, although their N-terminal structures are completely different: rabphilin contains an N-terminal Rab-binding domain (RBD),7 whereas Doc2 contains an N-terminal Munc13-1-interacting domain (MID). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain
Probab=99.40 E-value=1.7e-12 Score=116.45 Aligned_cols=100 Identities=25% Similarity=0.344 Sum_probs=80.7
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCCc--eEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPEL--ALL 506 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pel--a~L 506 (561)
....|+|+|++|++|+.. +..+.+||||+|.+.+...+..+.||++++++.||.|||+|.|.. ...++ ..|
T Consensus 13 ~~~~L~V~v~~a~~L~~~------~~~~~~dpyv~v~~~~~~~~~~~~rT~v~~~~~~P~Wne~f~f~~~~~~~~~~~~l 86 (123)
T cd04035 13 ANSALHCTIIRAKGLKAM------DANGLSDPYVKLNLLPGASKATKLRTKTVHKTRNPEFNETLTYYGITEEDIQRKTL 86 (123)
T ss_pred CCCEEEEEEEEeeCCCCC------CCCCCCCceEEEEEecCCCCCCceeeeeecCCCCCCccceEEEcCCCHHHhCCCEE
Confidence 346899999999999632 334568999999997655455678999999999999999999963 33222 479
Q ss_pred EEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 507 RIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 507 rf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
.|.|||.+.. ++++||++.++++.|..+-
T Consensus 87 ~~~v~d~~~~-~~~~iG~~~i~l~~l~~~~ 115 (123)
T cd04035 87 RLLVLDEDRF-GNDFLGETRIPLKKLKPNQ 115 (123)
T ss_pred EEEEEEcCCc-CCeeEEEEEEEcccCCCCc
Confidence 9999999877 7899999999999998763
No 115
>cd04048 C2A_Copine C2 domain first repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 doma
Probab=99.40 E-value=1.6e-12 Score=116.17 Aligned_cols=103 Identities=21% Similarity=0.247 Sum_probs=81.2
Q ss_pred EEEecCCCCCCCCCccCCCCCCCceeEEEEeccC--CCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCC
Q 008582 438 VYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP--ADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDM 515 (561)
Q Consensus 438 Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p--~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~ 515 (561)
.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||+|||+|.|.+..++...|+|.|||+|.
T Consensus 6 ~i~a~~L~~------~d~~g~~DPyv~v~~~~~~~~~~~~~~kT~vi~~t~nP~wne~f~f~~~~~~~~~l~~~V~d~d~ 79 (120)
T cd04048 6 SISCRNLLD------KDVLSKSDPFVVVYVKTGGSGQWVEIGRTEVIKNNLNPDFVTTFTVDYYFEEVQKLRFEVYDVDS 79 (120)
T ss_pred EEEccCCCC------CCCCCCCCcEEEEEEEcCCCCceEEeccEeEeCCCCCCCceEEEEEEEEeEeeeEEEEEEEEecC
Confidence 477888863 2345678999999998754 23346799999999999999999998776677789999999996
Q ss_pred ----CCCCcceEEEEEeCcccCCCc---eEEEccCCCC
Q 008582 516 ----SEKDDFGGQTCLPVSELKQGI---RAVPLHDRKG 546 (561)
Q Consensus 516 ----~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G 546 (561)
.+++++||++.+++..|..+- ...+|.+..+
T Consensus 80 ~~~~~~~~d~iG~~~i~l~~l~~~~~~~~~~~l~~~~~ 117 (120)
T cd04048 80 KSKDLSDHDFLGEAECTLGEIVSSPGQKLTLPLKGGKG 117 (120)
T ss_pred CcCCCCCCcEEEEEEEEHHHHhcCCCcEEEEEccCCCc
Confidence 678999999999999987542 3557754443
No 116
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=99.38 E-value=2.3e-12 Score=116.08 Aligned_cols=91 Identities=20% Similarity=0.364 Sum_probs=76.9
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|.|++|++|+. .+..+.+||||+|.+.+. ..+.||++++++.||.|||+|.|.+..++...|.|.|||+
T Consensus 2 lrV~Vi~a~~L~~------~d~~g~~DPYv~v~~~~~---~~~~kT~~v~~t~nP~Wne~f~f~~~~~~~~~L~~~V~d~ 72 (124)
T cd04037 2 VRVYVVRARNLQP------KDPNGKSDPYLKIKLGKK---KINDRDNYIPNTLNPVFGKMFELEATLPGNSILKISVMDY 72 (124)
T ss_pred EEEEEEECcCCCC------CCCCCCCCcEEEEEECCe---eccceeeEEECCCCCccceEEEEEecCCCCCEEEEEEEEC
Confidence 7899999999964 234567899999998642 2345788888999999999999998777778899999999
Q ss_pred CCCCCCcceEEEEEeCcccC
Q 008582 514 DMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~ 533 (561)
|..+++++||++.++|....
T Consensus 73 d~~~~dd~iG~~~i~l~~~~ 92 (124)
T cd04037 73 DLLGSDDLIGETVIDLEDRF 92 (124)
T ss_pred CCCCCCceeEEEEEeecccc
Confidence 98888999999999998765
No 117
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf, a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16,17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances i
Probab=99.37 E-value=3.1e-12 Score=118.53 Aligned_cols=92 Identities=29% Similarity=0.437 Sum_probs=78.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|.+|+.. +. +.+||||+|.+.+ .+.||++++++.||+|||+|.|.+..+ ...|.|.||
T Consensus 2 G~L~V~Vi~a~nL~~~------d~-~~sDPYV~v~~g~-----~~~kT~vvk~t~nP~WnE~f~f~i~~~-~~~l~~~V~ 68 (145)
T cd04038 2 GLLKVRVVRGTNLAVR------DF-TSSDPYVVLTLGN-----QKVKTRVIKKNLNPVWNEELTLSVPNP-MAPLKLEVF 68 (145)
T ss_pred eEEEEEEEeeECCCCC------CC-CCcCcEEEEEECC-----EEEEeeeEcCCCCCeecccEEEEecCC-CCEEEEEEE
Confidence 4699999999999632 22 5679999999853 578999999999999999999998766 567999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|++..+++++||++.+++..+..+-
T Consensus 69 D~d~~~~dd~iG~a~i~l~~l~~~~ 93 (145)
T cd04038 69 DKDTFSKDDSMGEAEIDLEPLVEAA 93 (145)
T ss_pred ECCCCCCCCEEEEEEEEHHHhhhhh
Confidence 9998888999999999999876543
No 118
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein. The ABR protein is similar to the breakpoint cluster region protein. It has homology to guanine nucleotide exchange proteins and GTPase-activating proteins (GAPs). ABR is expressed primarily in the brain, but also includes non-neuronal tissues such as the heart. It has been associated with human diseases such as Miller-Dieker syndrome in which mental retardation and malformations of the heart are present. ABR contains a RhoGEF domain and a PH-like domain upstream of its C2 domain and a RhoGAP domain downstream of this domain. A few members also contain a Bcr-Abl oncoprotein oligomerization domain at the very N-terminal end. Splice variants of ABR have been identified. ABR is found in a wide variety of organisms including chimpanzee, dog, mouse, rat, fruit fly, and mosquito. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arr
Probab=99.36 E-value=3.4e-12 Score=113.35 Aligned_cols=93 Identities=26% Similarity=0.350 Sum_probs=72.6
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|.+|++|. +.+||||++.+.+......+.||+++.++.||+|||+|.|.+.. ...|+|.|||+
T Consensus 1 L~V~V~~A~~L~-----------~~sDPYV~l~v~~~~~~~~~~KTk~i~~TlnPvWnE~F~i~l~~--s~~L~~~v~d~ 67 (118)
T cd08686 1 LNVIVHSAQGFK-----------QSANLYCTLEVDSFGYFVKKAKTRVCRDTTEPNWNEEFEIELEG--SQTLRILCYEK 67 (118)
T ss_pred CEEEEEeCCCCC-----------CCCCCEEEEEEcCccccceeeeeeeecCCCCCccceEEEEEeCC--CCEEEEEEEEc
Confidence 689999999983 23699999988653332457899999999999999999999863 34799999997
Q ss_pred -------CCCCCCcceEEEEEeCc--ccC-CCceEE
Q 008582 514 -------DMSEKDDFGGQTCLPVS--ELK-QGIRAV 539 (561)
Q Consensus 514 -------d~~~~dd~iGq~~lpL~--~L~-~GyR~i 539 (561)
|..+.|+++|.+.+.|+ .+. .|+...
T Consensus 68 ~~~~~~~d~~~~d~~~G~g~i~Ld~~~~~~~~~~~~ 103 (118)
T cd08686 68 CYSKVKLDGEGTDAIMGKGQIQLDPQSLQTKKWQEK 103 (118)
T ss_pred ccccccccccCcccEEEEEEEEECHHHhccCCeeEE
Confidence 45577999988887775 443 477543
No 119
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1). NEDL1 (AKA HECW1(HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1)) is a newly identified HECT-type E3 ubiquitin protein ligase highly expressed in favorable neuroblastomas. In vertebrates it is found primarily in neuronal tissues, including the spinal cord. NEDL1 is thought to normally function in the quality control of cellular proteins by eliminating misfolded proteins. This is thought to be accomplished via a mechanism analogous to that of ER-associated degradation by forming tight complexes and aggregating misfolded proteins that have escaped ubiquitin-mediated degradation. NEDL1, is composed of a C2 domain, two WW domains, and a ubiquitin ligase Hect domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are C
Probab=99.34 E-value=1.6e-11 Score=112.66 Aligned_cols=94 Identities=21% Similarity=0.326 Sum_probs=75.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC--------CceeeecccCCCCCCCcc-ccEEEEeeecCCc
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--------DTVMKKTKTLEDNWIPSW-NEEFEFPLSVPEL 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~--------d~~k~kTkvi~nn~nP~W-NE~f~F~v~~pel 503 (561)
.++|++++|.+|+. +.++.+||||++.+.+... +..++||+++.++.||+| ||+|.|.+...
T Consensus 2 ~~~~~~~~A~~L~~-------~~fg~~DPyvki~~~~~~~~~~~~~~~~~~~~kT~v~~~tlnP~W~nE~f~f~v~~~-- 72 (137)
T cd08691 2 SFSLSGLQARNLKK-------GMFFNPDPYVKISIQPGKRHIFPALPHHGQECRTSIVENTINPVWHREQFVFVGLPT-- 72 (137)
T ss_pred EEEEEEEEeCCCCC-------ccCCCCCceEEEEEECCCcccccccccccceeeeeeEcCCCCCceEceEEEEEcCCC--
Confidence 36889999999952 2357899999999964322 234789999999999999 99999998543
Q ss_pred eEEEEEEEecCCCCC---CcceEEEEEeCcccCCC
Q 008582 504 ALLRIEVHEYDMSEK---DDFGGQTCLPVSELKQG 535 (561)
Q Consensus 504 a~Lrf~V~D~d~~~~---dd~iGq~~lpL~~L~~G 535 (561)
..|.|.|||++..++ +++||++.+||..|..|
T Consensus 73 ~~L~v~V~D~~~~~~~~~~d~lG~~~i~l~~l~~~ 107 (137)
T cd08691 73 DVLEIEVKDKFAKSRPIIRRFLGKLSIPVQRLLER 107 (137)
T ss_pred CEEEEEEEecCCCCCccCCceEEEEEEEHHHhccc
Confidence 369999999865433 79999999999998755
No 120
>PLN03008 Phospholipase D delta
Probab=99.34 E-value=4.2e-12 Score=142.91 Aligned_cols=99 Identities=22% Similarity=0.448 Sum_probs=86.6
Q ss_pred CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 457 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 457 ~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
..+||||+|.+.+ ....||++++++.||+|||+|.|.+..+. +.|.|.|+|+|..+ +++||++.|||..|..|.
T Consensus 75 ~tSDPYV~I~Lg~----~rv~RTrVi~n~~NPvWNE~F~f~vah~~-s~L~f~VkD~D~~g-aD~IG~a~IPL~~L~~Ge 148 (868)
T PLN03008 75 ITSDPYVTVVVPQ----ATLARTRVLKNSQEPLWDEKFNISIAHPF-AYLEFQVKDDDVFG-AQIIGTAKIPVRDIASGE 148 (868)
T ss_pred CCCCceEEEEECC----cceeeEEeCCCCCCCCcceeEEEEecCCC-ceEEEEEEcCCccC-CceeEEEEEEHHHcCCCC
Confidence 4679999999943 23569999999999999999999988764 57999999999886 799999999999999996
Q ss_pred ---eEEEccCCCCCcccC-eEEEEEEEEC
Q 008582 537 ---RAVPLHDRKGERYKS-VKLLMHFEFI 561 (561)
Q Consensus 537 ---R~ipL~d~~G~~~~~-atLlv~~~f~ 561 (561)
++++|.+..|++..+ +.|.|+++|+
T Consensus 149 ~vd~Wl~Ll~~~~kp~k~~~kl~v~lqf~ 177 (868)
T PLN03008 149 RISGWFPVLGASGKPPKAETAIFIDMKFT 177 (868)
T ss_pred ceEEEEEccccCCCCCCCCcEEEEEEEEE
Confidence 688999999999955 7999999984
No 121
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin
Probab=99.34 E-value=9.9e-12 Score=114.06 Aligned_cols=104 Identities=29% Similarity=0.360 Sum_probs=83.8
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC------------
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP------------ 501 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p------------ 501 (561)
|+|+|+.|++|+.. ..+..||||+|.+.+ +....++||+++.++.||.|||+|.|.+...
T Consensus 1 L~V~Vi~A~~L~~~-------~~g~~dPyv~v~~~~-~~~~~~~rT~vv~~t~nP~Wne~f~f~~~~~~~~~~~~~~~~~ 72 (137)
T cd08675 1 LSVRVLECRDLALK-------SNGTCDPFARVTLNY-SSKTDTKRTKVKKKTNNPRFDEAFYFELTIGFSYEKKSFKVEE 72 (137)
T ss_pred CEEEEEEccCCCcc-------cCCCCCcEEEEEEec-CCcCCeeccceeeCCCCCCcceEEEEEcccccccccccccccc
Confidence 57999999998631 235679999999975 2334678999999999999999999998654
Q ss_pred ---CceEEEEEEEecCCCCCCcceEEEEEeCcccCCC---ceEEEccCCC
Q 008582 502 ---ELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG---IRAVPLHDRK 545 (561)
Q Consensus 502 ---ela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G---yR~ipL~d~~ 545 (561)
....|+|.|||.+..++++|||++.++|..+..+ ..|.+|....
T Consensus 73 ~~~~~~~l~i~V~d~~~~~~~~~IG~~~i~l~~l~~~~~~~~W~~L~~~~ 122 (137)
T cd08675 73 EDLEKSELRVELWHASMVSGDDFLGEVRIPLQGLQQAGSHQAWYFLQPRE 122 (137)
T ss_pred ccccccEEEEEEEcCCcCcCCcEEEEEEEehhhccCCCcccceEecCCcC
Confidence 3457999999999877899999999999998654 4677887543
No 122
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins, peptides, carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites, such as phytoalexins, or defense-related proteins, including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contai
Probab=99.33 E-value=8.3e-12 Score=112.09 Aligned_cols=92 Identities=25% Similarity=0.360 Sum_probs=75.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeecCC---ceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSVPE---LALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~pe---la~Lr 507 (561)
+.|.|+|++|++|+. .+..+.+||||+|.+.+ ..++|+++.+ +.||.|||+|.|.+..+. ...|.
T Consensus 1 g~L~V~V~~A~~L~~------~~~~~~~dpyv~v~~~~-----~~~~T~~~~~~t~nP~Wne~f~f~v~~~~~~~~~~l~ 69 (124)
T cd04049 1 GTLEVLLISAKGLQD------TDFLGKIDPYVIIQCRT-----QERKSKVAKGDGRNPEWNEKFKFTVEYPGWGGDTKLI 69 (124)
T ss_pred CeEEEEEEecCCCCC------CCCCCCcCceEEEEECC-----EeeeeeEcCCCCCCCcccceEEEEecCcccCCCCEEE
Confidence 368999999999963 23346789999999853 4568888775 799999999999998763 46789
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCC
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~ 534 (561)
|.|||.+..+++++||++.++|..+..
T Consensus 70 v~V~d~~~~~~d~~iG~~~i~l~~l~~ 96 (124)
T cd04049 70 LRIMDKDNFSDDDFIGEATIHLKGLFE 96 (124)
T ss_pred EEEEECccCCCCCeEEEEEEEhHHhhh
Confidence 999999888889999999999998853
No 123
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, synaptobrevi
Probab=99.33 E-value=1e-11 Score=111.75 Aligned_cols=94 Identities=21% Similarity=0.302 Sum_probs=75.1
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|.|+|+.|++++. + +..||||+|.+.+ .|.+|++++++ ||.|||+|.|.+..++.. |.|.||
T Consensus 2 ~~L~V~Vv~Ar~L~~----~-----~~~dPYV~Ik~g~-----~k~kT~v~~~~-nP~WnE~F~F~~~~~~~~-L~v~V~ 65 (127)
T cd08394 2 SLLCVLVKKAKLDGA----P-----DKFNTYVTLKVQN-----VKSTTIAVRGS-QPCWEQDFMFEINRLDLG-LVIELW 65 (127)
T ss_pred ceEEEEEEEeeCCCC----C-----CCCCCeEEEEECC-----EEeEeeECCCC-CCceeeEEEEEEcCCCCE-EEEEEE
Confidence 469999999999842 1 1248999999953 57789988774 999999999999765555 999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc-----eEEEcc
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI-----RAVPLH 542 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy-----R~ipL~ 542 (561)
|+|.. .||++|++.+||+.+..+- .|.+|.
T Consensus 66 dkd~~-~DD~lG~v~i~L~~v~~~~~~~~~~Wy~L~ 100 (127)
T cd08394 66 NKGLI-WDTLVGTVWIPLSTIRQSNEEGPGEWLTLD 100 (127)
T ss_pred eCCCc-CCCceEEEEEEhHHcccCCCCCCCccEecC
Confidence 99865 7999999999999986442 356664
No 124
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.32 E-value=1.2e-11 Score=110.97 Aligned_cols=93 Identities=25% Similarity=0.410 Sum_probs=77.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|+|+|++|++|+. .+..+.+||||+|.+.+ ..+.+|+++.++.||.|||+|.|.+..+. ..|+|.||
T Consensus 1 g~L~V~Vi~a~~L~~------~d~~g~~DPYv~v~~~~----~~~~kT~~~~~t~~P~Wne~f~~~v~~~~-~~L~v~v~ 69 (120)
T cd04045 1 GVLRLHIRKANDLKN------LEGVGKIDPYVRVLVNG----IVKGRTVTISNTLNPVWDEVLYVPVTSPN-QKITLEVM 69 (120)
T ss_pred CeEEEEEEeeECCCC------ccCCCCcCCEEEEEECC----EEeeceeEECCCcCCccCceEEEEecCCC-CEEEEEEE
Confidence 368999999999864 23356789999999854 24678999999999999999999886553 57999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G 535 (561)
|++..+++++||++.++|..+..+
T Consensus 70 d~~~~~~d~~IG~~~~~l~~l~~~ 93 (120)
T cd04045 70 DYEKVGKDRSLGSVEINVSDLIKK 93 (120)
T ss_pred ECCCCCCCCeeeEEEEeHHHhhCC
Confidence 999888899999999999988655
No 125
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family. SynGAP, GAP1, RasGAP, and neurofibromin are all members of the Ras-specific GAP (GTPase-activating protein) family. SynGAP regulates the MAP kinase signaling pathway and is critical for cognition and synapse function. Mutations in this gene causes mental retardation in humans. SynGAP contains a PH-like domain, a C2 domain, and a Ras-GAP domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at leas
Probab=99.32 E-value=2e-11 Score=112.91 Aligned_cols=115 Identities=17% Similarity=0.321 Sum_probs=92.8
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
...|+|.|+.|++|+.. .+|||+|.+.| ....||+++.++.||.|+|.|.|....+ ..-|.|.|
T Consensus 10 ~~sL~v~V~EAk~Lp~~-----------~~~Y~~i~Ld~----~~vaRT~v~~~~~nP~W~E~F~f~~~~~-~~~l~v~v 73 (146)
T cd04013 10 ENSLKLWIIEAKGLPPK-----------KRYYCELCLDK----TLYARTTSKLKTDTLFWGEHFEFSNLPP-VSVITVNL 73 (146)
T ss_pred EEEEEEEEEEccCCCCc-----------CCceEEEEECC----EEEEEEEEEcCCCCCcceeeEEecCCCc-ccEEEEEE
Confidence 35799999999999631 27899999986 2345999999999999999999975433 45689999
Q ss_pred EecCC-C---CCCcceEEEEEeCcccCCCc---eEEEccCCCCCc--------ccCeEEEEEEEEC
Q 008582 511 HEYDM-S---EKDDFGGQTCLPVSELKQGI---RAVPLHDRKGER--------YKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~-~---~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~--------~~~atLlv~~~f~ 561 (561)
+..+. . .++++||.+.||+..+..|. +|.||.+.+|.+ -+++.|-|+++|.
T Consensus 74 ~k~~~~~~~~~~~~~IG~V~Ip~~~l~~~~~ve~Wfpl~~~~~~~~~~~~~~~~~~~~lrik~rf~ 139 (146)
T cd04013 74 YRESDKKKKKDKSQLIGTVNIPVTDVSSRQFVEKWYPVSTPKGNGKSGGKEGKGESPSIRIKARYQ 139 (146)
T ss_pred EEccCccccccCCcEEEEEEEEHHHhcCCCcccEEEEeecCCCCCccccccccCCCCEEEEEEEEE
Confidence 65442 2 25789999999999999885 799999999986 5668999999883
No 126
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs). RasGAPs suppress Ras function by enhancing the GTPase activity of Ras proteins resulting in the inactive GDP-bound form of Ras. In this way it can control cellular proliferation and differentiation. The proteins here all contain either a single C2 domain or two tandem C2 domains, a Ras-GAP domain, and a pleckstrin homology (PH)-like domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2
Probab=99.28 E-value=5.7e-11 Score=105.16 Aligned_cols=113 Identities=21% Similarity=0.305 Sum_probs=83.8
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEEEEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVH 511 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf~V~ 511 (561)
|+|+|+.|.+|+.. +.+||||+|.+.+ ...+||+++.+ .||.|||+|.|.+...++ ..|.|.|+
T Consensus 2 L~v~vi~a~~l~~~---------~~~dpyv~v~~~~----~~~~kT~~~~~-~~P~Wne~f~f~v~~~~~~~~~l~i~v~ 67 (117)
T cd08383 2 LRLRILEAKNLPSK---------GTRDPYCTVSLDQ----VEVARTKTVEK-LNPFWGEEFVFDDPPPDVTFFTLSFYNK 67 (117)
T ss_pred eEEEEEEecCCCcC---------CCCCceEEEEECC----EEeEecceEEC-CCCcccceEEEecCCccccEEEEEEEEE
Confidence 78999999999631 4579999999964 23468999988 999999999999876543 45778888
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc-eEEEccCCCCCcccCeEEEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI-RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy-R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
|.+...++.++|.+.+.......+. .|.+|....+.....+.|.+.+.|
T Consensus 68 d~~~~~~~~~~g~v~l~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~~~~ 117 (117)
T cd08383 68 DKRSKDRDIVIGKVALSKLDLGQGKDEWFPLTPVDPDSEVQGSVRLRARY 117 (117)
T ss_pred ecccCCCeeEEEEEEecCcCCCCcceeEEECccCCCCCCcCceEEEEEEC
Confidence 8775555677777665555554444 467887766655556689888876
No 127
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase. E3 ubiquitin ligase is part of the ubiquitylation mechanism responsible for controlling surface expression of membrane proteins. The sequential action of several enzymes are involved: ubiquitin-activating enzyme E1, ubiquitin-conjugating enzyme E2, and ubiquitin-protein ligase E3 which is responsible for substrate recognition and promoting the transfer of ubiquitin to the target protein. E3 ubiquitin ligase is composed of an N-terminal C2 domain, 4 WW domains, and a HECTc domain. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction e
Probab=99.27 E-value=4.8e-11 Score=107.68 Aligned_cols=114 Identities=23% Similarity=0.315 Sum_probs=84.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
..|.|+|++|+.+.. +..+.+||||+|.+.+. .+.+|+++.++.||.|||+|.|.+. +...|.|.||
T Consensus 2 ~~L~V~i~~a~l~~~-------~~~~~~dPyv~v~~~~~----~~~kT~v~~~t~~P~Wne~f~~~~~--~~~~l~~~V~ 68 (125)
T cd04021 2 SQLQITVESAKLKSN-------SKSFKPDPYVEVTVDGQ----PPKKTEVSKKTSNPKWNEHFTVLVT--PQSTLEFKVW 68 (125)
T ss_pred ceEEEEEEeeECCCC-------CcCCCCCeEEEEEECCc----ccEEeeeeCCCCCCccccEEEEEeC--CCCEEEEEEE
Confidence 469999999983321 22456899999998642 3678999999999999999999974 3467999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCC-------ce-EEEccCCC-CCcccCeEEEEEE
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQG-------IR-AVPLHDRK-GERYKSVKLLMHF 558 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~G-------yR-~ipL~d~~-G~~~~~atLlv~~ 558 (561)
|++..+.+++||++.++|..+..+ ++ +++|..++ +.-...+.|.+.+
T Consensus 69 d~~~~~~~~~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 124 (125)
T cd04021 69 SHHTLKADVLLGEASLDLSDILKNHNGKLENVKLTLNLSSENKGSSVKVGELTVIL 124 (125)
T ss_pred eCCCCCCCcEEEEEEEEHHHhHhhcCCCccceEEEEEEEccCCCcceeeeeEEEEe
Confidence 999888899999999999987642 22 56776443 1112234676655
No 128
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.27 E-value=3.7e-12 Score=131.93 Aligned_cols=96 Identities=30% Similarity=0.494 Sum_probs=83.7
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIEV 510 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~V 510 (561)
..|+|+|..|.+|.. .+..+.+||||++.+...+....|+||++++.++||+|||+|.|.+...+. ..|.+.|
T Consensus 180 ~~l~v~i~ea~NLiP------MDpNGlSDPYvk~kliPD~~~~sKqKTkTik~~LNP~wNEtftf~Lkp~DkdrRlsiEv 253 (683)
T KOG0696|consen 180 DVLTVTIKEAKNLIP------MDPNGLSDPYVKLKLIPDPKNESKQKTKTIKATLNPVWNETFTFKLKPSDKDRRLSIEV 253 (683)
T ss_pred ceEEEEehhhccccc------cCCCCCCCcceeEEeccCCcchhhhhhhhhhhhcCccccceeEEecccccccceeEEEE
Confidence 468899999988853 355677899999999988888889999999999999999999999875543 5789999
Q ss_pred EecCCCCCCcceEEEEEeCcccC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
||+|..+++||+|...+.+++|.
T Consensus 254 WDWDrTsRNDFMGslSFgisEl~ 276 (683)
T KOG0696|consen 254 WDWDRTSRNDFMGSLSFGISELQ 276 (683)
T ss_pred ecccccccccccceecccHHHHh
Confidence 99999999999999999998875
No 129
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking. C2 domains are unique among membrane targeting domains in that they show wide range of lipid selectivity for the major components of cell membranes, including phosphatidylserine and phosphatidylcholine. This C2 domain is about 116 amino-acid residues and is located between the two copies of the C1 domain in Protein Kinase C (that bind phorbol esters and diacylglycerol) (see PDOC00379 from PROSITEDOC) and the protein kinase catalytic domain (see PDOC00100 from PROSITEDOC). Regions with significant homology [] to the C2-domain have been found in many proteins. The C2 domain is thought to be involved in calcium-dependent phospholipid binding [] and in membrane targetting processes such as subcellular localisation. The 3D structure of the C2 domain of synaptotagmin has been reported [], the domain forms an eight-stranded beta sandwich constructed around a conserved 4-stranded motif, designated a C2 key []. Calcium binds in a cup-shaped depression formed by the N- and C-terminal loops of the C2-key motif. Structural analyses of several C2 domains have shown them to consist of similar ternary structures in which three Ca2+-binding loops are located at the end of an 8 stranded antiparallel beta sandwich. ; GO: 0005515 protein binding; PDB: 1RSY_A 1BYN_A 3NSJ_A 3QR1_D 3HN8_C 1DQV_A 3M7F_B 3KWU_A 3KWT_A 1V27_A ....
Probab=99.26 E-value=2.4e-11 Score=100.17 Aligned_cols=85 Identities=38% Similarity=0.550 Sum_probs=73.0
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|++|++|+.. +..+.+||||+|.+.+.+. .+.+|+++.++.+|.|||+|.|.+..++...|.|.|||.
T Consensus 1 L~v~I~~a~~L~~~------~~~~~~~~yv~v~~~~~~~--~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~~~V~~~ 72 (85)
T PF00168_consen 1 LTVTIHSARNLPSK------DSNGKPDPYVRVSVNGSES--TKYKTKVKKNTSNPVWNEEFEFPLDDPDLDSLSFEVWDK 72 (85)
T ss_dssp EEEEEEEEESSSSS------STTSSBEEEEEEEEETTTC--EEEEECCBSSBSSEEEEEEEEEEESHGCGTEEEEEEEEE
T ss_pred CEEEEEEEECCCCc------ccCCcccccceeecceeee--eeeeeeeeeccccceeeeeeeeeeecccccceEEEEEEC
Confidence 78999999999742 2344679999999987544 568999999999999999999998888888899999999
Q ss_pred CCCCCCcceEEEE
Q 008582 514 DMSEKDDFGGQTC 526 (561)
Q Consensus 514 d~~~~dd~iGq~~ 526 (561)
+..+++++||+++
T Consensus 73 ~~~~~~~~iG~~~ 85 (85)
T PF00168_consen 73 DSFGKDELIGEVK 85 (85)
T ss_dssp TSSSSEEEEEEEE
T ss_pred CCCCCCCEEEEEC
Confidence 9888899999974
No 130
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins. C2-like domains are thought to be involved in phospholipid binding in a Ca2+ independent manner in both Unc13 and Munc13. Caenorabditis elegans Unc13 has a central domain with sequence similarity to PKC, which includes C1 and C2-related domains. Unc13 binds phorbol esters and DAG with high affinity in a phospholipid manner. Mutations in Unc13 results in abnormal neuronal connections and impairment in cholinergic neurotransmission in the nematode. Munc13 is the mammalian homolog which are expressed in the brain. There are 3 isoforms (Munc13-1, -2, -3) and are thought to play a role in neurotransmitter release and are hypothesized to be high-affinity receptors for phorbol esters. Unc13 and Munc13 contain both C1 and C2 domains. There are two C2 related domains present, one central and one at the carboxyl end. Munc13-1 contains a third C2-like domain. Munc13 interacts with syntaxin, sy
Probab=99.26 E-value=3.8e-11 Score=112.14 Aligned_cols=94 Identities=29% Similarity=0.424 Sum_probs=75.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCC------------------------ceeeecccCCCC
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPAD------------------------TVMKKTKTLEDN 485 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d------------------------~~k~kTkvi~nn 485 (561)
....|+|+|++|++|+. .+..+.+||||+|.+.+.... ...++|+++.++
T Consensus 26 ~~~~L~V~vi~a~~L~~------~d~~g~~DPyv~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kT~v~~~t 99 (153)
T cd08676 26 PIFVLKVTVIEAKGLLA------KDVNGFSDPYCMLGIVPASRERNSEKSKKRKSHRKKAVLKDTVPAKSIKVTEVKPQT 99 (153)
T ss_pred CeEEEEEEEEeccCCcc------cCCCCCCCceEEEEEcccccccccccccccccccccccccccccccccEecceecCC
Confidence 34689999999999863 234567899999988532110 123689999999
Q ss_pred CCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 486 WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 486 ~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.||.|||+|.|.+..+....|.|.|||++ +++||++.++++.+.
T Consensus 100 lnP~WnE~F~f~v~~~~~~~L~i~V~D~d----d~~IG~v~i~l~~l~ 143 (153)
T cd08676 100 LNPVWNETFRFEVEDVSNDQLHLDIWDHD----DDFLGCVNIPLKDLP 143 (153)
T ss_pred CCCccccEEEEEeccCCCCEEEEEEEecC----CCeEEEEEEEHHHhC
Confidence 99999999999987655578999999987 889999999999987
No 131
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin, a yeast homolog of Synaptotagmin, which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain.
Probab=99.26 E-value=3.8e-11 Score=105.99 Aligned_cols=98 Identities=17% Similarity=0.242 Sum_probs=78.8
Q ss_pred CCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 454 DAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 454 ~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
...+.+||||+|.+.+ ...++|+++.++.||+|||+|.|.+..+....|.|.|+|.+.. ++++||.+.+||+.+.
T Consensus 8 ~~~G~~dPYv~v~v~~----~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~~l~i~v~d~~~~-~d~~iG~~~v~L~~l~ 82 (111)
T cd04052 8 SKTGLLSPYAELYLNG----KLVYTTRVKKKTNNPSWNASTEFLVTDRRKSRVTVVVKDDRDR-HDPVLGSVSISLNDLI 82 (111)
T ss_pred ccCCCCCceEEEEECC----EEEEEEeeeccCCCCccCCceEEEecCcCCCEEEEEEEECCCC-CCCeEEEEEecHHHHH
Confidence 3456789999999954 2456899988899999999999998765556799999999987 7999999999999873
Q ss_pred -C---CceEEEccCCCCCcccCeEEEEEEEEC
Q 008582 534 -Q---GIRAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 534 -~---GyR~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
. +.+|.+|.+ ...++|.++++|.
T Consensus 83 ~~~~~~~~w~~L~~-----~~~G~i~~~~~~~ 109 (111)
T cd04052 83 DATSVGQQWFPLSG-----NGQGRIRISALWK 109 (111)
T ss_pred hhhhccceeEECCC-----CCCCEEEEEEEEe
Confidence 2 356888865 2357898888873
No 132
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.23 E-value=5.4e-11 Score=114.01 Aligned_cols=98 Identities=27% Similarity=0.411 Sum_probs=83.8
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc------ccchHHHHHHHHhhhccccC
Q 008582 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------APVELIKCLRSIKEYAFVAS 195 (561)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------s~i~f~dvi~aI~~~AF~~S 195 (561)
.+|+-|....+ +.|..+|..||..|||.||+|||...| ++|||.|+.++. .-.+|.||++.++++++ .+
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~D-g~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~ 76 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKD-GELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NP 76 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCC-CeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cC
Confidence 37888766554 888999999999999999999998766 479999999986 56889999999999999 88
Q ss_pred CCceEEEeccCCCH----HHHHHHHHHHHHHhh
Q 008582 196 EYPVVITLEDHLTP----DLQAKVAEMVTQTLG 224 (561)
Q Consensus 196 ~yPvIlSlE~Hcs~----~qQ~~ma~~l~~i~G 224 (561)
.+|++|.||.+++. ..+.++++.+++..+
T Consensus 77 ~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~~ 109 (179)
T cd08555 77 DYTIILSLEIKQDSPEYDEFLAKVLKELRVYFD 109 (179)
T ss_pred CCceEEEEEeCCCCCcchHHHHHHHHHHHHcCC
Confidence 89999999999874 566777777776653
No 133
>cd04047 C2B_Copine C2 domain second repeat in Copine. There are 2 copies of the C2 domain present in copine, a protein involved in membrane trafficking, protein-protein interactions, and perhaps even cell division and growth. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 dom
Probab=99.20 E-value=1e-10 Score=102.63 Aligned_cols=93 Identities=22% Similarity=0.340 Sum_probs=71.9
Q ss_pred EEEEecCCCCCCCCCccCCCCCCCceeEEEEeccC-CCceeeecccCCCCCCCccccEEEEeee---cCC-ceEEEEEEE
Q 008582 437 TVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVP-ADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPE-LALLRIEVH 511 (561)
Q Consensus 437 ~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p-~d~~k~kTkvi~nn~nP~WNE~f~F~v~---~pe-la~Lrf~V~ 511 (561)
-.++|++|+. .+..+.+||||+|.+.+.. ....++||++++++.||.|| +|.|.+. ..+ ...|+|.||
T Consensus 5 ~~i~a~~L~~------~d~~~~~DPyv~v~~~~~~~~~~~~~kT~vi~~t~nP~Wn-~f~~~~~~l~~~~~~~~l~~~V~ 77 (110)
T cd04047 5 LQFSGKKLDK------KDFFGKSDPFLEISRQSEDGTWVLVYRTEVIKNTLNPVWK-PFTIPLQKLCNGDYDRPIKIEVY 77 (110)
T ss_pred EEEEeCCCCC------CCCCCCCCeeEEEEEECCCCCEEEEEeeeEeccCCCCceE-EEEEEHHHhcCCCcCCEEEEEEE
Confidence 3568888853 2445678999999987532 12345799999999999999 7877653 222 458999999
Q ss_pred ecCCCCCCcceEEEEEeCcccCCCc
Q 008582 512 EYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
|++..+++++||++.++++.|..+.
T Consensus 78 d~d~~~~d~~iG~~~~~l~~l~~~~ 102 (110)
T cd04047 78 DYDSSGKHDLIGEFETTLDELLKSS 102 (110)
T ss_pred EeCCCCCCcEEEEEEEEHHHHhcCC
Confidence 9998888999999999999998553
No 134
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.15 E-value=2.6e-10 Score=123.11 Aligned_cols=121 Identities=24% Similarity=0.317 Sum_probs=93.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIE 509 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf~ 509 (561)
..|+|+|+.|.+|+.. +..+.+||||++.+. |....|.+|++.++++||+|||+|.|.|...++ ..|.|.
T Consensus 167 ~~L~V~V~qa~~Lp~~------d~~g~sdpyVK~~ll--Pdk~~k~kT~v~r~tlnP~fnEtf~f~v~~~~l~~~~L~l~ 238 (421)
T KOG1028|consen 167 NLLTVRVIQAHDLPAK------DRGGTSDPYVKVYLL--PDKKGKFKTRVHRKTLNPVFNETFRFEVPYEELSNRVLHLS 238 (421)
T ss_pred CEEEEEEEEecCCCcc------cCCCCCCCeeEEEEc--CCCCCcceeeeeecCcCCccccceEeecCHHHhccCEEEEE
Confidence 5799999999999743 223467999999986 444678899999999999999999999765544 579999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccC-eEEEEEEEE
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEF 560 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~-atLlv~~~f 560 (561)
|||.|..+++++||++.+||..+..+. .|.+|....-..-.. +.|++...+
T Consensus 239 V~~~drfsr~~~iGev~~~l~~~~~~~~~~~w~~l~~~~~~~~~~~gel~~sL~Y 293 (421)
T KOG1028|consen 239 VYDFDRFSRHDFIGEVILPLGEVDLLSTTLFWKDLQPSSTDSEELAGELLLSLCY 293 (421)
T ss_pred EEecCCcccccEEEEEEecCccccccccceeeeccccccCCcccccceEEEEEEe
Confidence 999999999999999999999887665 355665431111111 366666554
No 135
>smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases, protein kinases C, and synaptotamins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids, inositol polyphosphates, and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
Probab=99.13 E-value=4.4e-10 Score=94.64 Aligned_cols=99 Identities=38% Similarity=0.556 Sum_probs=81.0
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|+|+.|+++... ......+|||++.+.+.. ....+|+++.++.||.|||+|.|.+..+....|.|.|||.
T Consensus 2 l~i~i~~~~~l~~~------~~~~~~~~yv~v~~~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~~~l~i~v~~~ 73 (101)
T smart00239 2 LTVKIISARNLPKK------DKKGKSDPYVKVSLDGDP--KEKKKTKVVKNTLNPVWNETFEFEVPPPELAELEIEVYDK 73 (101)
T ss_pred eEEEEEEeeCCCCC------CCCCCCCceEEEEEeCCc--cceEeeeEecCCCCCcccceEEEEecCcccCEEEEEEEec
Confidence 78999999998632 122457999999997532 3467899998889999999999998766567899999999
Q ss_pred CCCCCCcceEEEEEeCcccCCCceEEE
Q 008582 514 DMSEKDDFGGQTCLPVSELKQGIRAVP 540 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~GyR~ip 540 (561)
+..+.+.++|.+.+++..+..|+++.+
T Consensus 74 ~~~~~~~~~G~~~~~l~~~~~~~~~~~ 100 (101)
T smart00239 74 DRFGRDDFIGQVTIPLSDLLLGGRHEK 100 (101)
T ss_pred CCccCCceeEEEEEEHHHcccCccccC
Confidence 876678999999999999999987654
No 136
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.06 E-value=3.7e-10 Score=121.87 Aligned_cols=116 Identities=22% Similarity=0.259 Sum_probs=89.8
Q ss_pred CCCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eE
Q 008582 428 LPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--AL 505 (561)
Q Consensus 428 ~p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~ 505 (561)
+|..+.|+|.|+.|.+|.. .+..+..||||++.+........|+||.+.+++.||+|||+|.|.|....+ +.
T Consensus 294 ~p~~g~ltv~v~kar~L~~------~~~~~~~d~~Vk~~l~~~~~~~~kkkT~~~~~~~npv~nesf~F~vp~~~l~~~~ 367 (421)
T KOG1028|consen 294 LPTAGRLTVVVIKARNLKS------MDVGGLSDPYVKVTLLDGDKRLSKKKTSVKKKTLNPVFNETFVFDVPPEQLAEVS 367 (421)
T ss_pred ecCCCeEEEEEEEecCCCc------ccCCCCCCccEEEEEecCCceeeeeeeecccCCCCCcccccEEEeCCHHHhheeE
Confidence 3567899999999999963 244567899999998754444557899999999999999999998864444 57
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccCCCceEE-EccCCCCCcc
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELKQGIRAV-PLHDRKGERY 549 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~GyR~i-pL~d~~G~~~ 549 (561)
|.++|||+|..+++++||++.+....-..|-+|| .+.+.-++++
T Consensus 368 l~l~V~d~d~~~~~~~iG~~~lG~~~~~~~~~hW~~m~~~p~~pv 412 (421)
T KOG1028|consen 368 LELTVWDHDTLGSNDLIGRCILGSDSTGEEVRHWQEMLNSPRKPV 412 (421)
T ss_pred EEEEEEEcccccccceeeEEEecCCCCchHHHHHHHHHhCccCce
Confidence 9999999999999999999988887744444554 4444445544
No 137
>PLN03200 cellulose synthase-interactive protein; Provisional
Probab=99.02 E-value=1.1e-09 Score=134.01 Aligned_cols=114 Identities=16% Similarity=0.314 Sum_probs=91.3
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc-eEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL-ALLRIE 509 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel-a~Lrf~ 509 (561)
.+.|+|+|++|+++. +.++.+||||.|.+.. ..++||+++++|.||+|||.|+|.+..|.. ..|.|.
T Consensus 1979 ~G~L~V~V~~a~nl~--------~~~~~sdPyv~l~~g~----~~~~kTkvvk~~~nP~Wne~f~~~~~~p~~~~~l~ie 2046 (2102)
T PLN03200 1979 PGSLTVTIKRGNNLK--------QSMGNTNAFCKLTLGN----GPPRQTKVVSHSSSPEWKEGFTWAFDSPPKGQKLHIS 2046 (2102)
T ss_pred CcceEEEEeeccccc--------cccCCCCCeEEEEECC----CCcccccccCCCCCCCcccceeeeecCCCCCCceEEE
Confidence 468999999999984 2245679999999873 236789999999999999999999887654 459999
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCce---EEEccC---CCCCcccCeEEEEEEEE
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGIR---AVPLHD---RKGERYKSVKLLMHFEF 560 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~GyR---~ipL~d---~~G~~~~~atLlv~~~f 560 (561)
|||+|..+ ++.+|.+.+++..+-.+-+ +.+|.+ ++|++ =+|-++|+|
T Consensus 2047 v~d~d~f~-kd~~G~~~i~l~~vv~~~~~~~~~~L~~~~~k~G~~---~~~~~e~~w 2099 (2102)
T PLN03200 2047 CKSKNTFG-KSSLGKVTIQIDRVVMEGTYSGEYSLNPESNKDGSS---RTLEIEFQW 2099 (2102)
T ss_pred EEecCccC-CCCCceEEEEHHHHhcCceeeeeeecCcccccCCCc---ceEEEEEEe
Confidence 99999875 6699999999998875433 568875 44543 379999988
No 138
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferlins are involved in vesicle fusion events. Ferlins and other proteins, such as Synaptotagmins, are implicated in facilitating the fusion process when cell membranes fuse together. There are six known human Ferlins: Dysferlin (Fer1L1), Otoferlin (Fer1L2), Myoferlin (Fer1L3), Fer1L4, Fer1L5, and Fer1L6. Defects in these genes can lead to a wide range of diseases including muscular dystrophy (dysferlin), deafness (otoferlin), and infertility (fer-1, fertilization factor-1). Structurally they have 6 tandem C2 domains, designated as (C2A-C2F) and a single C-terminal transmembrane domain, though there is a new study that disputes this and claims that there are actually 7 tandem C2 domains with another C2 domain inserted between C2D and C2E. In a subset of them (Dysferlin, Myoferlin, and Fer1) there is an additional conserved domain called DysF. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=98.97 E-value=2.9e-09 Score=96.91 Aligned_cols=99 Identities=23% Similarity=0.260 Sum_probs=78.2
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCC--CccccEEEEeeec-----------
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWI--PSWNEEFEFPLSV----------- 500 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~n--P~WNE~f~F~v~~----------- 500 (561)
|+|.|..+.+++..... ......+||||++.+.+. ...+++|.++.+++| |+||+.|.|.+..
T Consensus 2 LRViIw~~~~v~~~~~~--~~g~~~sD~yVK~~L~~~--~~~kqkTDVHyrslnG~~~FNwRfvF~~~~~~~~~~~~~~~ 77 (133)
T cd08374 2 LRVIVWNTRDVLNDDTN--ITGEKMSDIYVKGWLDGL--EEDKQKTDVHYRSLDGEGNFNWRFVFPFDYLPAEKKIVVIK 77 (133)
T ss_pred EEEEEEECcCCcccccc--cCCccccCeEEEEEEccC--cccccccceEEecCCCCcEEeEEEEEeeecCCccceeEEEe
Confidence 78999999997643111 111124799999999875 356789999999988 9999999998765
Q ss_pred ----------CCc--eEEEEEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 501 ----------PEL--ALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 501 ----------pel--a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
.++ ..|.++|||.|..++|++||+..++|..|.+|.
T Consensus 78 ~~~~~~~~~~e~~~~~~L~lqvwD~D~~s~dd~iG~~~l~l~~l~~~~ 125 (133)
T cd08374 78 KEHFWSLDETEYKIPPKLTLQVWDNDKFSPDDFLGSLELDLSILPRPA 125 (133)
T ss_pred eccccccCcceEecCcEEEEEEEECcccCCCCcceEEEEEhhhccccc
Confidence 122 578999999999999999999999999987775
No 139
>PLN02270 phospholipase D alpha
Probab=98.97 E-value=4e-09 Score=119.20 Aligned_cols=125 Identities=18% Similarity=0.302 Sum_probs=100.5
Q ss_pred CceEEEEEEEecCCCCC-CCCC------c----c-CCCCCCCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEe
Q 008582 431 KKTLKVTVYMGEGWYYD-FPHT------H----F-DAYSPPDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFP 497 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~-~~~~------~----~-~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~ 497 (561)
.++|.|+|+.|.+|+.. .... . + .....+||||.|.+.+ ....||+++.|. .||.|||+|...
T Consensus 7 hg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~tv~~~~----a~v~rtr~~~~~~~~p~w~e~f~i~ 82 (808)
T PLN02270 7 HGTLHATIYEVDKLHSGGGPGFLGKLVANVEETVGVGKGESQLYATIDLEK----ARVGRTRKIENEPKNPRWYESFHIY 82 (808)
T ss_pred ecceEEEEEEcccCCCcchhhHHHHHHhccchhccCCCCCCCceEEEEeCC----cEEEEEeecCCCCCCCccccceEEe
Confidence 46899999999998742 0000 0 0 0123569999999976 245699999886 699999999998
Q ss_pred eecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccC-eEEEEEEEEC
Q 008582 498 LSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKS-VKLLMHFEFI 561 (561)
Q Consensus 498 v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~-atLlv~~~f~ 561 (561)
+..+ .+-|.|.|+|.|..+ ..+||.+.+|+..|..|- ++.|+.+.+|+|+.+ +.|.|+++|+
T Consensus 83 ~ah~-~~~v~f~vkd~~~~g-~~~ig~~~~p~~~~~~g~~i~~~~~~~~~~~~p~~~~~~~~~~~~f~ 148 (808)
T PLN02270 83 CAHM-ASNIIFTVKDDNPIG-ATLIGRAYIPVEEILDGEEVDRWVEILDNDKNPIHGGSKIHVKLQYF 148 (808)
T ss_pred eccC-cceEEEEEecCCccC-ceEEEEEEEEHHHhcCCCccccEEeccCCCCCcCCCCCEEEEEEEEE
Confidence 8765 367899999999776 779999999999999994 789999999999954 8999999985
No 140
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=98.92 E-value=1.9e-09 Score=116.03 Aligned_cols=92 Identities=27% Similarity=0.451 Sum_probs=76.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
.+++++|++||||.. -+..+.+||||.+.+. ..|+||++|..++||+|||.|+|.+.+. ...|++.||
T Consensus 295 akitltvlcaqgl~a------kdktg~sdpyvt~qv~-----ktkrrtrti~~~lnpvw~ekfhfechns-tdrikvrvw 362 (1283)
T KOG1011|consen 295 AKITLTVLCAQGLIA------KDKTGKSDPYVTAQVG-----KTKRRTRTIHQELNPVWNEKFHFECHNS-TDRIKVRVW 362 (1283)
T ss_pred eeeEEeeeeccccee------cccCCCCCCcEEEeec-----ccchhhHhhhhccchhhhhheeeeecCC-CceeEEEEe
Confidence 478999999999964 2456778999999986 3688999999999999999999998765 346899999
Q ss_pred ecCCC-----------CCCcceEEEEEeCcccCCC
Q 008582 512 EYDMS-----------EKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 512 D~d~~-----------~~dd~iGq~~lpL~~L~~G 535 (561)
|+|.. ..|||+||..|-+..|...
T Consensus 363 ded~dlksklrqkl~resddflgqtvievrtlsge 397 (1283)
T KOG1011|consen 363 DEDNDLKSKLRQKLTRESDDFLGQTVIEVRTLSGE 397 (1283)
T ss_pred cCcccHHHHHHHHhhhcccccccceeEEEEecccc
Confidence 98742 3589999999999888544
No 141
>cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain, such as protein kinase C, or membrane trafficking proteins which contain at least two C2 domains, such as synaptotagmin 1. However, there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues, primarily aspartates, that serve as ligands for calcium ions.
Probab=98.88 E-value=1.6e-08 Score=84.39 Aligned_cols=90 Identities=39% Similarity=0.570 Sum_probs=73.9
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|.|.|++|++++.. ......+|||.+.+.+ ....+|+++.++.||.||+.|.|.+.......|.|.|++.
T Consensus 1 l~v~i~~~~~l~~~------~~~~~~~~~v~v~~~~----~~~~~T~~~~~~~~P~w~~~~~~~~~~~~~~~l~i~v~~~ 70 (102)
T cd00030 1 LRVTVIEARNLPAK------DLNGKSDPYVKVSLGG----KQKFKTKVVKNTLNPVWNETFEFPVLDPESDTLTVEVWDK 70 (102)
T ss_pred CEEEEEeeeCCCCc------CCCCCCCcEEEEEecc----CceEecceeCCCCCCcccceEEEEccCCCCCEEEEEEEec
Confidence 57899999988642 1234679999999975 3567899998889999999999998764456799999998
Q ss_pred CCCCCCcceEEEEEeCcccC
Q 008582 514 DMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~ 533 (561)
+..+.+.++|++.+++..+.
T Consensus 71 ~~~~~~~~ig~~~~~l~~l~ 90 (102)
T cd00030 71 DRFSKDDFLGEVEIPLSELL 90 (102)
T ss_pred CCCCCCceeEEEEEeHHHhh
Confidence 87666899999999999887
No 142
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.86 E-value=7e-09 Score=106.25 Aligned_cols=137 Identities=15% Similarity=0.245 Sum_probs=107.7
Q ss_pred CCCccceeecccccccccCCC--CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhh
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQ--LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKE 189 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Q--l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~ 189 (561)
+.||++.-|-.|||++-.... -.+.+....+..-|..|+|.++|+|+..+ +++..++||..... .+|.||++.|++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~-~~~l~~~Hg~~~~~-~~~~dvL~~i~~ 84 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLID-NNDLAIHHGPFYQG-LTFGDVLNECYS 84 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecC-CCeEEEEccCcccc-CcHHHHHHHHHH
Confidence 779999999999998754432 44566667788999999999999999864 24689999976555 899999999999
Q ss_pred hccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCC---CCCCCCChhhccCcEEEecC
Q 008582 190 YAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSE---CLKEFPSPESLKRRIIISTK 253 (561)
Q Consensus 190 ~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~---~~~~lPSP~~Lk~KIlik~K 253 (561)
+--..-.-.|||+|..+.+... -.+-+.++|.+.+..+... ....+|+..++||||++-.+
T Consensus 85 FL~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~r 148 (279)
T cd08586 85 FLDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRR 148 (279)
T ss_pred HHHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEe
Confidence 8877777889999999998763 3334555566665554422 24789999999999999865
No 143
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.83 E-value=1.2e-08 Score=104.02 Aligned_cols=138 Identities=18% Similarity=0.272 Sum_probs=104.3
Q ss_pred CCCCCccceeecccccccccCCCC--CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc-cchHHHHHHH
Q 008582 110 DMTAPVSHYFIYTGHNSYLTGNQL--NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA-PVELIKCLRS 186 (561)
Q Consensus 110 dm~~PLs~YfI~SSHNTYL~g~Ql--~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts-~i~f~dvi~a 186 (561)
--++||++|.+-.+||+|..+..- .+...-......|..|.|-++||++..+ ++..++||.-... ..+|.|+++.
T Consensus 7 ~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~--~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 7 LCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN--GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred cCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC--CCEEEECCCccccCCccHHHHHHH
Confidence 357899999999999999887653 3344444678889999999999999753 4588999865543 7899999999
Q ss_pred HhhhccccCCCceEEEeccCCCHHHHHHHHHHHH-HHhhccccCCCCCC--CCCCCChhhcc--CcEEE
Q 008582 187 IKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT-QTLGEILFTPGSEC--LKEFPSPESLK--RRIII 250 (561)
Q Consensus 187 I~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~-~i~Gd~L~~~~~~~--~~~lPSP~~Lk--~KIli 250 (561)
|+++.=..-.=-|||.||++.+.... ..+.+++ ..||+.+|.|+... ...+|++++|. ||-||
T Consensus 85 i~~fL~~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi~~gkRlv 152 (270)
T cd08588 85 VVDFLDANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMIDANKRLL 152 (270)
T ss_pred HHHHHHhCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHHhcCCEEE
Confidence 99986433333389999999987654 3333333 68999999886443 46899999998 55444
No 144
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.72 E-value=4.3e-08 Score=112.74 Aligned_cols=105 Identities=26% Similarity=0.398 Sum_probs=88.9
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.+.|+|.+++|++|+. .+..+-+||||++.+.+ +.-+||++++.++||+|||+|...|.+-....+.+.|
T Consensus 1039 sG~l~I~~~~~~nl~~------~d~ng~sDpfv~~~ln~----k~vyktkv~KktlNPvwNEe~~i~v~~r~~D~~~i~v 1108 (1227)
T COG5038 1039 SGYLTIMLRSGENLPS------SDENGYSDPFVKLFLNE----KSVYKTKVVKKTLNPVWNEEFTIEVLNRVKDVLTINV 1108 (1227)
T ss_pred cCcEEEEEeccCCCcc------cccCCCCCceEEEEecc----eecccccchhccCCCCccccceEeeeccccceEEEEE
Confidence 5679999999999963 34455689999999975 3367999999999999999999999877777899999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc---eEEEccCCC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI---RAVPLHDRK 545 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~ 545 (561)
+|+|...+++.||++.++|..|.+|- -.|||-.+.
T Consensus 1109 ~Dwd~~~knd~lg~~~idL~~l~~~~~~n~~i~ldgk~ 1146 (1227)
T COG5038 1109 NDWDSGEKNDLLGTAEIDLSKLEPGGTTNSNIPLDGKT 1146 (1227)
T ss_pred eecccCCCccccccccccHhhcCcCCccceeeeccCcc
Confidence 99999999999999999999998885 356766554
No 145
>PLN02352 phospholipase D epsilon
Probab=98.48 E-value=8.6e-07 Score=100.33 Aligned_cols=118 Identities=19% Similarity=0.264 Sum_probs=89.5
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
.++|.++|+.|..+...+... .......||||.|.+.+. ...|| .|.-||+|||+|...+..+-.+-|.|.|
T Consensus 9 hg~l~~~i~~~~~~~~~~~~~-~~~~~~~~~y~tv~~~~~----~v~rt---~~~~~p~w~e~f~i~~ah~~~~~~~f~v 80 (758)
T PLN02352 9 HGTLEATIFDATPYTPPFPFN-CIFLNGKATYVTIKIGNK----KVAKT---SHEYDRVWNQTFQILCAHPLDSTITITL 80 (758)
T ss_pred ccceEEEEEEeeehhhccccc-ccccCCCCceEEEEeCCc----EEecC---CCCCCCccccceeEEeeeecCCcEEEEE
Confidence 468999999997322111100 001122399999999762 34567 4556999999999988766545789999
Q ss_pred EecCCCCCCcceEEEEEeCcccCCCc----eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELKQGI----RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~~Gy----R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
+| ...+||.+.+|+..|..|- ++.|+.+.+|+|+.+++|.|+++|+
T Consensus 81 k~-----~~~~ig~~~~p~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 130 (758)
T PLN02352 81 KT-----KCSILGRFHIQAHQIVTEASFINGFFPLIMENGKPNPELKLRFMLWFR 130 (758)
T ss_pred ec-----CCeEEEEEEEEHHHhhCCCcccceEEEcccCCCCCCCCCEEEEEEEEE
Confidence 98 2679999999999998883 6899999999999999999999985
No 146
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.19 E-value=6.1e-07 Score=98.47 Aligned_cols=96 Identities=24% Similarity=0.374 Sum_probs=76.0
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC--CceeeecccCCCCCCCccccEEEEeeec----CCce
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA--DTVMKKTKTLEDNWIPSWNEEFEFPLSV----PELA 504 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~--d~~k~kTkvi~nn~nP~WNE~f~F~v~~----pela 504 (561)
..+|.|.|+.|.++.. .|..+-+||||.|++...-. -...+||+++..++||+|+|+|+|.|.. .+.|
T Consensus 946 ~q~L~veVlhA~diip------LD~NGlSDPFVviEl~P~~~fp~v~~q~T~V~~rtLnPVfDE~FeFsVp~e~c~te~A 1019 (1103)
T KOG1328|consen 946 AQTLVVEVLHAKDIIP------LDSNGLSDPFVVIELIPKFRFPAVPVQKTKVVSRTLNPVFDETFEFSVPPEPCSTETA 1019 (1103)
T ss_pred ccchhhhhhccccccc------cCCCCCCCCeEEEEeccccccccchhhhhhhhhccccchhhhheeeecCccccccccc
Confidence 3567788888877642 35567789999999863110 1234689999999999999999999863 3468
Q ss_pred EEEEEEEecCCCCCCcceEEEEEeCccc
Q 008582 505 LLRIEVHEYDMSEKDDFGGQTCLPVSEL 532 (561)
Q Consensus 505 ~Lrf~V~D~d~~~~dd~iGq~~lpL~~L 532 (561)
+|.|+|.|+|-...+||-|++.+.|..+
T Consensus 1020 m~~FTVMDHD~L~sNDFaGEA~L~Lg~v 1047 (1103)
T KOG1328|consen 1020 MLHFTVMDHDYLRSNDFAGEAFLELGDV 1047 (1103)
T ss_pred eEEEEeeccceecccccchHHHHhhCCC
Confidence 9999999999988999999999888776
No 147
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only]
Probab=98.03 E-value=1.1e-05 Score=93.33 Aligned_cols=93 Identities=23% Similarity=0.314 Sum_probs=73.0
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVH 511 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~ 511 (561)
+.|.|+|.+|.++... ..-..+.+|||+.+...+ ....||++++|.+||+|||+|...+..- -.-|.+.||
T Consensus 436 GVv~vkI~sa~~lk~~----d~~i~~~vDpyit~~~~~----r~~gkT~v~~nt~nPvwNEt~Yi~lns~-~d~L~Lsly 506 (1227)
T COG5038 436 GVVEVKIKSAEGLKKS----DSTINGTVDPYITVTFSD----RVIGKTRVKKNTLNPVWNETFYILLNSF-TDPLNLSLY 506 (1227)
T ss_pred EEEEEEEeeccCcccc----cccccCCCCceEEEEecc----ccCCccceeeccCCccccceEEEEeccc-CCceeEEEE
Confidence 5788999999988532 112346789999999764 3455999999999999999988776421 235899999
Q ss_pred ecCCCCCCcceEEEEEeCcccC
Q 008582 512 EYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 512 D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
|.+...+|+++|...++|..|.
T Consensus 507 D~n~~~sd~vvG~~~l~L~~L~ 528 (1227)
T COG5038 507 DFNSFKSDKVVGSTQLDLALLH 528 (1227)
T ss_pred eccccCCcceeeeEEechHHhh
Confidence 9777778999999999998875
No 148
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae. This family is named after the protein kinase C in Saccharomyces cerevisiae, Pkc1p. Protein kinase C is a member of a family of Ser/Thr phosphotransferases that are involved in many cellular signaling pathways. PKC has two antiparallel coiled-coiled regions (ACC finger domain) (AKA PKC homology region 1 (HR1)/ Rho binding domain) upstream of the C2 domain and two C1 domains downstream. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains, like those of PKC, are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphosphates, and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that
Probab=98.00 E-value=1.2e-05 Score=69.77 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=64.1
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEec
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEY 513 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~ 513 (561)
|+|+|.++.++... .....++.+||||.|.+.+ ..+.||++. -||.|||+|.|.+. ...-+.|.|||.
T Consensus 1 L~I~V~~~RdvdH~---~~~~~~~~~etyV~IKved----~~kaRTr~s---rnd~WnE~F~i~Vd--k~nEiel~VyDk 68 (109)
T cd08689 1 LTITITSARDVDHI---ASPRFSKRPETYVSIKVED----VERARTKPS---RNDRWNEDFEIPVE--KNNEEEVIVYDK 68 (109)
T ss_pred CEEEEEEEecCccc---cchhhccCCCcEEEEEECC----EEEEeccCC---CCCcccceEEEEec--CCcEEEEEEEeC
Confidence 67889999887421 1111346689999999975 457788874 68999999999984 345689999997
Q ss_pred CCCCCCcceEEEEEeCcccCCC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQG 535 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~G 535 (561)
.. ...-.||...++++.|...
T Consensus 69 ~~-~~~~Pi~llW~~~sdi~Ee 89 (109)
T cd08689 69 GG-DQPVPVGLLWLRLSDIAEE 89 (109)
T ss_pred CC-CeecceeeehhhHHHHHHH
Confidence 53 3345788877887766433
No 149
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.93 E-value=3.3e-05 Score=84.11 Aligned_cols=104 Identities=28% Similarity=0.395 Sum_probs=81.9
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-Cc-eeeecccCCCCCCCccccEEEEeee---cCCceE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DT-VMKKTKTLEDNWIPSWNEEFEFPLS---VPELAL 505 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~-~k~kTkvi~nn~nP~WNE~f~F~v~---~pela~ 505 (561)
..+++|+|+.|.+|.+. +.+.-.|||+|.+.|... |. .|+.|++..||..|.|||+|+|.+. .|+---
T Consensus 1124 ehkvtvkvvaandlkwq-------tsgmFrPFVEV~ivGP~lsDKKRK~~TKtKsnnWaPKyNEtF~f~Lg~e~~Pe~YE 1196 (1283)
T KOG1011|consen 1124 EHKVTVKVVAANDLKWQ-------TSGMFRPFVEVHIVGPHLSDKKRKFSTKTKSNNWAPKYNETFHFFLGNEGGPEHYE 1196 (1283)
T ss_pred cceEEEEEEecccccch-------hccccccceEEEEecCcccchhhhccccccCCCcCcccCceeEEEeccCCCCceEE
Confidence 35789999999988542 334557899999998543 22 3456888899999999999999875 366667
Q ss_pred EEEEEEecCCCCCCcceEEEEEeCcccC-CCc--eEEEc
Q 008582 506 LRIEVHEYDMSEKDDFGGQTCLPVSELK-QGI--RAVPL 541 (561)
Q Consensus 506 Lrf~V~D~d~~~~dd~iGq~~lpL~~L~-~Gy--R~ipL 541 (561)
|.|+|+|+.....|.++|.+.++|.++. .|- .|+||
T Consensus 1197 L~~~VKDYCFAReDRvvGl~VlqL~~va~kGS~a~W~pL 1235 (1283)
T KOG1011|consen 1197 LQFCVKDYCFAREDRVVGLAVLQLRSVADKGSCACWVPL 1235 (1283)
T ss_pred EEEeehhheeecccceeeeeeeehhhHhhcCceeEeeec
Confidence 9999999987777889999999999874 453 57787
No 150
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.91 E-value=3.8e-05 Score=84.90 Aligned_cols=109 Identities=23% Similarity=0.300 Sum_probs=83.6
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEV 510 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V 510 (561)
...|.|+|..|++||.. +..+..|||+.|.+.. ....||.++-.++.|.|.|.|.|.+.- ....|.|-|
T Consensus 4 ~~sl~vki~E~knL~~~------~~~g~~D~yC~v~lD~----E~v~RT~tv~ksL~PF~gEe~~~~iP~-~F~~l~fYv 72 (800)
T KOG2059|consen 4 EQSLKVKIGEAKNLPSY------GPSGMRDCYCTVNLDQ----EEVCRTATVEKSLCPFFGEEFYFEIPR-TFRYLSFYV 72 (800)
T ss_pred ccceeEEEeecccCCCC------CCCCCcCcceEEeecc----hhhhhhhhhhhhcCCccccceEEecCc-ceeeEEEEE
Confidence 35689999999999742 3456679999999864 346689999999999999999999843 356689999
Q ss_pred EecCCCCCCcceEEEEEeCcccC--CCce-EEEc--cCCCCCcccC
Q 008582 511 HEYDMSEKDDFGGQTCLPVSELK--QGIR-AVPL--HDRKGERYKS 551 (561)
Q Consensus 511 ~D~d~~~~dd~iGq~~lpL~~L~--~GyR-~ipL--~d~~G~~~~~ 551 (561)
||.| ..+|+.||.++|.-..|. +|.- |..| .|+.-+.-+.
T Consensus 73 ~D~d-~~~D~~IGKvai~re~l~~~~~~d~W~~L~~VD~dsEVQG~ 117 (800)
T KOG2059|consen 73 WDRD-LKRDDIIGKVAIKREDLHMYPGKDTWFSLQPVDPDSEVQGK 117 (800)
T ss_pred eccc-cccccccceeeeeHHHHhhCCCCccceeccccCCChhhcee
Confidence 9999 788999999999877663 4542 3344 5666665443
No 151
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only]
Probab=97.81 E-value=7.4e-05 Score=80.63 Aligned_cols=120 Identities=18% Similarity=0.284 Sum_probs=91.2
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccE-EEEeeecCCc--eEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEE-FEFPLSVPEL--ALLRI 508 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~-f~F~v~~pel--a~Lrf 508 (561)
++|.|+|..|.+||...+ .....|.||+|.+.. ...||.+...++||.||.. |.|.|...++ ..|.+
T Consensus 3 gkl~vki~a~r~lpvmdk-----asd~tdafveik~~n-----~t~ktdvf~kslnp~wnsdwfkfevddadlqdeplqi 72 (1169)
T KOG1031|consen 3 GKLGVKIKAARHLPVMDK-----ASDLTDAFVEIKFAN-----TTFKTDVFLKSLNPQWNSDWFKFEVDDADLQDEPLQI 72 (1169)
T ss_pred CcceeEEEeccCCccccc-----ccccchheeEEEecc-----cceehhhhhhhcCCcccccceEEecChhhhccCCeeE
Confidence 578999999999985321 123457899999874 5678999999999999955 8999987665 46899
Q ss_pred EEEecCCCCCCcceEEEEEeCcccC----------CCc---eEEEccCCCCCcccCeEEEEEEEEC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELK----------QGI---RAVPLHDRKGERYKSVKLLMHFEFI 561 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~----------~Gy---R~ipL~d~~G~~~~~atLlv~~~f~ 561 (561)
.+.|+|..+.+|-||.+.+.++-|. .|. -|+|++|.-..--+...+.|++++|
T Consensus 73 ~lld~dtysandaigkv~i~idpl~~e~aaqavhgkgtvisgw~pifdtihgirgeinvivkvdlf 138 (1169)
T KOG1031|consen 73 RLLDHDTYSANDAIGKVNIDIDPLCLEEAAQAVHGKGTVISGWFPIFDTIHGIRGEINVIVKVDLF 138 (1169)
T ss_pred EEecccccccccccceeeeccChHHHHhHHhhhcCCceEEeeeeecceecccccceeEEEEEEeeh
Confidence 9999999888999999999888663 232 3778887543333445778887764
No 152
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=97.64 E-value=0.00041 Score=71.22 Aligned_cols=135 Identities=20% Similarity=0.306 Sum_probs=95.4
Q ss_pred CCCccceeecccccccccCCCCC---------CCCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLN---------SDCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELI 181 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~---------g~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~ 181 (561)
+.||++=+|--|||+.--+-... +..--.....-|..|.|-+.|.|.-.+ .+++-.++||-.. -.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~~--~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLVR--IVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECcccc--cccHH
Confidence 45999999999999875432221 122223356678899999999996432 2245678887543 38999
Q ss_pred HHHHHHhhhccccCCCceEEEeccCCC------HHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc--cCcEEEe
Q 008582 182 KCLRSIKEYAFVASEYPVVITLEDHLT------PDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL--KRRIIIS 251 (561)
Q Consensus 182 dvi~aI~~~AF~~S~yPvIlSlE~Hcs------~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~L--k~KIlik 251 (561)
+|++.|+++.=.. .=-|||.+ .|.. +++-..+.++|.+.||+.|+.|.. .....|+.++| +||.+|-
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~-~~~~~~TL~~l~~~gkrViv 158 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR-NYGWGPTLSEIWARRKRVII 158 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc-cccccCcHHHHHhcCCEEEE
Confidence 9999999986444 66688887 4442 577788899999999999998753 23456899996 5565544
No 153
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=97.52 E-value=0.00079 Score=69.50 Aligned_cols=136 Identities=15% Similarity=0.221 Sum_probs=95.0
Q ss_pred CCCccceeecccccccccCCCCCC---------------------CCChHHHHHHHhCCCcEEEEEeeCCC-CCCCceEE
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLNS---------------------DCSDVPIIRALQKGVRVIELDIWPNS-KKDNVDVL 169 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g---------------------~Ss~e~Y~~aL~~GCRcvElD~Wdg~-~~~~piv~ 169 (561)
+.||.+..|-.|||+.--+-.-.+ ..--.....=|..|+|-.+|++.-.+ .+++-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 579999999999998643322211 11112245667899999999995432 12456788
Q ss_pred eCCcccccchHHHHHHHHhhhccccCCCceEEEeccC-----CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhc
Q 008582 170 HGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH-----LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESL 244 (561)
Q Consensus 170 HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H-----cs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~L 244 (561)
||-- +-.+|.+|++.|+++.=....=-|||.++.. ++.++-..+.+.|.++||+.++.+ .....-|+.++|
T Consensus 86 H~~~--~~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--~~~~~~~tL~~l 161 (288)
T cd08587 86 HGLY--SGEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR--DSDLLDVTLADL 161 (288)
T ss_pred eecc--cccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC--ccccCCCcHHHH
Confidence 8732 2388999999999975444455688888643 335778888899999999999976 223466789999
Q ss_pred c--CcEEEe
Q 008582 245 K--RRIIIS 251 (561)
Q Consensus 245 k--~KIlik 251 (561)
. ||-+|-
T Consensus 162 ~~~gk~viv 170 (288)
T cd08587 162 WESGKRVIV 170 (288)
T ss_pred HhCCCeEEE
Confidence 8 774443
No 154
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms]
Probab=97.51 E-value=8.4e-05 Score=85.90 Aligned_cols=96 Identities=21% Similarity=0.236 Sum_probs=76.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEee-ecCC--ceEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPL-SVPE--LALLRI 508 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v-~~pe--la~Lrf 508 (561)
.+|+|-|-.+++|+.- .-+..|||||+..+...|....|+|||+++.+.||.|||.+.+.. .... ...|.+
T Consensus 1524 ~~LtImV~H~K~L~~L------qdg~~P~pyVK~YLlPdp~k~sKRKTKvvrkt~~PTfnE~LvY~g~p~~~l~qReLQ~ 1597 (1639)
T KOG0905|consen 1524 GTLTIMVMHAKGLALL------QDGQDPDPYVKTYLLPDPRKTSKRKTKVVRKTRNPTFNEMLVYDGFPKEILQQRELQV 1597 (1639)
T ss_pred ceEEEEhhhhcccccc------cCCCCCCcceeEEecCCchHhhhhhhccccccCCCchhhheeecCCchhhhhhheeee
Confidence 4567777777887531 123568999999999888888899999999999999999998872 2222 246899
Q ss_pred EEEecCCCCCCcceEEEEEeCcccC
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
.||..+....+.++|.+++||..+.
T Consensus 1598 sVls~~~~~en~~lg~v~i~L~~~~ 1622 (1639)
T KOG0905|consen 1598 SVLSNGGLLENVFLGGVNIPLLKVD 1622 (1639)
T ss_pred eeecccceeeeeeeeeeecchhhcc
Confidence 9999988888999999999998763
No 155
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=97.43 E-value=0.00016 Score=82.64 Aligned_cols=124 Identities=22% Similarity=0.277 Sum_probs=93.8
Q ss_pred ccceeeeeCCCCCCCCCCCCcccccccccceeeeecccCCCCcccCCCCCCCCCceEEEEEEEecCCCCCCCCCccCCCC
Q 008582 378 QRNLLRIYPKGIRVDSSNYNPLIGWSHGAQMVAFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYS 457 (561)
Q Consensus 378 ~~~l~RvYP~g~RidSSNf~P~~~W~~G~QmVALN~QnG~~Gyvl~P~~~~p~~~~L~V~Visaq~L~~~~~~~~~~~~~ 457 (561)
-+.+.||||-+ |=-|+|.-|..| +-|| ...|+...++|.|..|.+|.. .|..+
T Consensus 580 fKgl~rIyp~~-~~~~~p~~pr~~---------~~~~-----------~~~pi~~LvrVyvv~A~~L~p------~D~ng 632 (1105)
T KOG1326|consen 580 FKGLFRIYPVP-RNPSSPAPPRHF---------LDLP-----------KEEPIKCLVRVYVVEAFSLQP------SDGNG 632 (1105)
T ss_pred hhcceeeecCC-CccCCCCChhhh---------hccc-----------ccCcceeeEEEEEEEeeeccc------cCCCC
Confidence 35789999998 666777777655 1222 113556677888888888743 24456
Q ss_pred CCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcc
Q 008582 458 PPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSE 531 (561)
Q Consensus 458 ~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~ 531 (561)
..||||++.+.+. ....++..+.+++||+|++-|++....|-...+.+.|||+|..+.|+.||+..+.|..
T Consensus 633 ~adpYv~l~lGk~---~~~d~~~yip~tlnPVfgkmfel~~~lp~ek~l~v~vyd~D~~~~d~~iget~iDLEn 703 (1105)
T KOG1326|consen 633 DADPYVKLLLGKK---RTLDRAHYIPNTLNPVFGKMFELECLLPFEKDLIVEVYDHDLEAQDEKIGETTIDLEN 703 (1105)
T ss_pred CcCceeeeeeccc---hhhhhhhcCcCCCCcHHHHHHHhhcccchhhcceeEEEEeecccccchhhceehhhhh
Confidence 6899999998641 1224567788999999999999988888777899999999999999999999988764
No 156
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms]
Probab=97.40 E-value=0.00036 Score=77.36 Aligned_cols=76 Identities=26% Similarity=0.418 Sum_probs=62.5
Q ss_pred CCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecC---------------CceEEEEEEEe-cCCCCCCc
Q 008582 457 SPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVP---------------ELALLRIEVHE-YDMSEKDD 520 (561)
Q Consensus 457 ~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~p---------------ela~Lrf~V~D-~d~~~~dd 520 (561)
+..|||+.|...|.-.... ++|++++.+-+|.|||.|.|.+... ++..|++.+|+ .+....++
T Consensus 149 ~~~dp~~~v~~~g~~~~~~-~~T~~~kkt~~p~~~Ev~~f~~~~~~~~s~ks~~~~~~e~~~l~irv~lW~~~~~~~~~~ 227 (800)
T KOG2059|consen 149 GQCDPFARVTLCGPSKLKE-KKTKVKKKTTNPQFDEVFYFEVTREESYSKKSLFMPEEEDDMLEIRVDLWNDLNLVINDV 227 (800)
T ss_pred CCCCcceEEeecccchhhc-cccceeeeccCcchhhheeeeeccccccccchhcCcccCCceeeEEEeeccchhhhhhhh
Confidence 3479999999987433333 6899999999999999999998755 56778999999 46666699
Q ss_pred ceEEEEEeCcccC
Q 008582 521 FGGQTCLPVSELK 533 (561)
Q Consensus 521 ~iGq~~lpL~~L~ 533 (561)
|+|+..+|+..++
T Consensus 228 FlGevrv~v~~~~ 240 (800)
T KOG2059|consen 228 FLGEVRVPVDVLR 240 (800)
T ss_pred hceeEEeehhhhh
Confidence 9999999999887
No 157
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.35 E-value=0.00033 Score=71.74 Aligned_cols=105 Identities=23% Similarity=0.288 Sum_probs=75.5
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCce--EEEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELA--LLRIE 509 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela--~Lrf~ 509 (561)
..|.|+++.+..+. .++..+-.||||++.+...-....|+||.+.+++.||.||+.|.|.+..-+++ -+.+.
T Consensus 233 ~~l~vt~iRc~~l~------ssDsng~sDpyvS~~l~pdv~~~fkkKt~~~K~t~~p~fd~~~~~~i~pgdLa~~kv~ls 306 (362)
T KOG1013|consen 233 PGLIVTIIRCSHLA------SSDSNGYSDPYVSQRLSPDVGKKFKKKTQQKKKTLNPEFDEEFFYDIGPGDLAYKKVALS 306 (362)
T ss_pred CceEEEEEEeeeee------ccccCCCCCccceeecCCCcchhhcccCcchhccCCccccccccccCCccchhcceEEEe
Confidence 35788888766553 24555678999999887322233467899999999999999999999877775 57889
Q ss_pred EEecCCCCCCcceEEEEEeCcccCCCceEEEccCCCCCc
Q 008582 510 VHEYDMSEKDDFGGQTCLPVSELKQGIRAVPLHDRKGER 548 (561)
Q Consensus 510 V~D~d~~~~dd~iGq~~lpL~~L~~GyR~ipL~d~~G~~ 548 (561)
|||++....++++|-.. ..+||.-++++..|.+
T Consensus 307 vgd~~~G~s~d~~GG~~------~g~~rr~~v~~h~gr~ 339 (362)
T KOG1013|consen 307 VGDYDIGKSNDSIGGSM------LGGYRRGEVHKHWGRC 339 (362)
T ss_pred ecccCCCcCccCCCccc------ccccccchhhcCcccc
Confidence 99998766678887432 2345555666555554
No 158
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, alpha isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a c
Probab=97.20 E-value=0.0065 Score=57.17 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=69.5
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeec---CCceE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELAL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~ 505 (561)
..+.++|+|+++.++... ...|.||++.+......- ....|+.+.. .++.|||-++|.|.. |-.|.
T Consensus 6 ~~~~~~v~i~~~~~~~~~---------~~~~l~V~v~l~~g~~~L~~pv~T~~v~~-~~~~WnEwL~fpI~i~dLPr~Ar 75 (158)
T cd08398 6 INSNLRIKILCATYVNVN---------DIDKIYVRTGIYHGGEPLCDNVNTQRVPC-SNPRWNEWLDYDIYIPDLPRSAR 75 (158)
T ss_pred CCCCeEEEEEeeccCCCC---------CcCeEEEEEEEEECCEEccCeeEecccCC-CCCccceeEEcccchhcCChhhe
Confidence 346799999999987532 124779999887422111 1123443332 468999999998864 44589
Q ss_pred EEEEEEecCCCC----CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 506 LRIEVHEYDMSE----KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 506 Lrf~V~D~d~~~----~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|+|+||+..... ....+|++.++|= .|++|...+.|.
T Consensus 76 L~iti~~~~~~~~~k~~~~~iG~~ni~LFd~~~~Lr~G~~~L~lW 120 (158)
T cd08398 76 LCLSICSVKGRKGAKEEHCPLAWGNINLFDYTDTLVSGKMALNLW 120 (158)
T ss_pred EEEEEEEEecccCCCCceEEEEEEEEEEECCCChhhCCCEEEEEE
Confidence 999999975321 1246999999984 588998766664
No 159
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, beta and delta isoforms of PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Ty
Probab=97.10 E-value=0.0082 Score=57.36 Aligned_cols=105 Identities=20% Similarity=0.196 Sum_probs=71.6
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeec---CCceE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSV---PELAL 505 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~ 505 (561)
....++|+|+++.++.. .....+.||++.+......- ....|+.+.-+..+.|||.+.|.+.. |-.|.
T Consensus 6 ~~~~f~i~i~~~~~~~~--------~~~~~~l~V~~~lyhG~~~L~~p~~T~~~~~~~~~~Wnewl~F~I~i~dLPr~Ar 77 (173)
T cd08693 6 IEEKFSITLHKISNLNA--------AERTMKVGVQAGLFHGGESLCKTVKTSEVSGKNDPVWNETLEFDINVCDLPRMAR 77 (173)
T ss_pred cCCCEEEEEEEeccCcc--------CCCCceEEEEEEEEECCEEccCceEccccCCCCccccceeEEcccchhcCChhHe
Confidence 34579999999998853 01234668888876322111 12345544434569999999998764 55689
Q ss_pred EEEEEEecCCCC----------------CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 506 LRIEVHEYDMSE----------------KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 506 Lrf~V~D~d~~~----------------~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|+|.||+..... ....||++.++|= .|++|...+.|.
T Consensus 78 Lciti~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~n~~LFd~~~~Lr~G~~~L~lW 134 (173)
T cd08693 78 LCFAIYEVSKKAKGKRSRKNQTKKKKKKDDNPIAWVNTMVFDYKGQLKTGDHTLYMW 134 (173)
T ss_pred EEEEEEEecccccccccccccccccccCcceEEEEEeEEEEcccchhhcCCeEEEec
Confidence 999999965321 1369999999984 588998777664
No 160
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks). C2 domain present in all classes of PI3Ks. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular perm
Probab=97.09 E-value=0.0077 Score=56.35 Aligned_cols=104 Identities=19% Similarity=0.193 Sum_probs=70.6
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecccCCCCCCCccccEEEEeeec---CCceEEE
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 507 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lr 507 (561)
..++|+|.+..+.... .....+.||++.+.-...... ...|+......++.|||.+.|.+.. |-.|.|.
T Consensus 8 ~~~~i~i~~~~~~~~~-------~~~~~~l~V~~~l~~g~~~l~~~~~t~~~~~~~~~~Wne~l~F~i~~~~LP~~arL~ 80 (156)
T cd08380 8 FNLRIKIHGITNINLL-------DSEDLKLYVRVQLYHGGEPLCPPQSTKKVPFSTSVTWNEWLTFDILISDLPREARLC 80 (156)
T ss_pred CCeEEEEEeecccccc-------CCCceeEEEEEEEEECCEEccCceeccCCcCCCCCcccceeEccchhhcCChhheEE
Confidence 4678888877766420 112346688888764222122 2234433333579999999998754 5558999
Q ss_pred EEEEecCCCC--CCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 508 IEVHEYDMSE--KDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 508 f~V~D~d~~~--~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
|+||+.+... ....||++.++|= .|++|...+.|.
T Consensus 81 itl~~~~~~~~~~~~~iG~~~~~lFd~~~~L~~G~~~l~lW 121 (156)
T cd08380 81 LSIYAVSEPGSKKEVPLGWVNVPLFDYKGKLRQGMITLNLW 121 (156)
T ss_pred EEEEEEecCCCCcceEEEEEeEEeEcccCcEecCCEEEecc
Confidence 9999976443 3579999999984 588999888885
No 161
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=97.09 E-value=0.006 Score=63.10 Aligned_cols=137 Identities=18% Similarity=0.259 Sum_probs=90.5
Q ss_pred CCCccceeecccccccc---cCCCCCCC------------------------CChHHHHHHHhCCCcEEEEEeeCCCCCC
Q 008582 112 TAPVSHYFIYTGHNSYL---TGNQLNSD------------------------CSDVPIIRALQKGVRVIELDIWPNSKKD 164 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~g~Ql~g~------------------------Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~ 164 (561)
+.||.+..|--|||+-- ..+.-.|. +-......-|..|.|-+.|.+--.++++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 46999999999999642 22221211 1112245567899999999996433234
Q ss_pred CceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccC--CCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChh
Q 008582 165 NVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH--LTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPE 242 (561)
Q Consensus 165 ~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H--cs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~ 242 (561)
+-.++||-. +. ++.||++.|+++.=....=-|||.+... -+.++-..+.+.|.++||+.|+.+.. ...-|+.+
T Consensus 87 ~~~~~Hg~~--~~-~~~~~L~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~l~~~l~~~fg~~l~~~~~--~~~~~tL~ 161 (290)
T cd08616 87 DLYFVHGLY--GI-LVKEILEEINDFLTEHPKEVVILDFNHFYGMTEEDHEKLLKMIKSIFGKKLCPRDP--DLLNVTLE 161 (290)
T ss_pred cEEEEEecc--ch-hHHHHHHHHHHHHHHCCCcEEEEEEEccCCCCHHHHHHHHHHHHHHhcccccCCCC--CcCcCcHH
Confidence 578999843 22 9999999999975333445588888632 13455567888999999999985432 23457899
Q ss_pred hcc---CcEEEecC
Q 008582 243 SLK---RRIIISTK 253 (561)
Q Consensus 243 ~Lk---~KIlik~K 253 (561)
+|. .+|+|-..
T Consensus 162 ~l~~~~krVIi~y~ 175 (290)
T cd08616 162 YLWEKGYQVIVFYH 175 (290)
T ss_pred HHHhCCCEEEEEEC
Confidence 997 33555443
No 162
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks). There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a N-terminal C2 domain, a PIK domain, and a kinase catalytic domain. Unlike class I and class III, class II PI3Ks have additionally a PX domain and a C-terminal C2 domain containing a nuclear localization signal both of which bind phospholipids though in a slightly different fashion. Class II PIK3s act downstream of receptors for growth factors, integrins, and chemokines. PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. C2 domains fold into an 8-standed beta-sandwich that c
Probab=96.92 E-value=0.0082 Score=57.22 Aligned_cols=117 Identities=23% Similarity=0.208 Sum_probs=77.1
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCc-eeeecccC--CCCC--CCccccEEEEeeec---C
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADT-VMKKTKTL--EDNW--IPSWNEEFEFPLSV---P 501 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~-~k~kTkvi--~nn~--nP~WNE~f~F~v~~---p 501 (561)
+...++|+|.++++++.... ....|.||++.+.-....- ....|+.. .+.+ .+.|||.+.|.+.. |
T Consensus 6 v~~~~~i~v~~~h~~~~~~~------~~~~~~~v~~~l~~g~~~L~~~~~T~~~~~~~~f~~~~~Wnewl~F~i~i~~LP 79 (171)
T cd04012 6 VTDLLSVTVSSLHRIPPTWV------QSFEDFYLSCSLYHGGRLLCSPVTTKPVKITKSFFPRVVWDEWIEFPIPVCQLP 79 (171)
T ss_pred ccccEEEEEEEeecCChHHh------hccccEEEEEEEEECCEECcCceeccccccccCccccccccceEECccchhcCC
Confidence 34578999999998874321 1234679999887422211 12244432 2332 57899999998764 5
Q ss_pred CceEEEEEEEecCCCC---------CCcceEEEEEeCc----ccCCCceEEEccC-CCCCcccCe
Q 008582 502 ELALLRIEVHEYDMSE---------KDDFGGQTCLPVS----ELKQGIRAVPLHD-RKGERYKSV 552 (561)
Q Consensus 502 ela~Lrf~V~D~d~~~---------~dd~iGq~~lpL~----~L~~GyR~ipL~d-~~G~~~~~a 552 (561)
-.|.|.|.||+..... ....||++.++|= .|++|...+.|.- ....+++.+
T Consensus 80 rearL~itl~~~~~~~~~~~~~~~~~~~~lG~~~~~LFd~~~~L~~G~~~L~lW~~~~~~~~~~~ 144 (171)
T cd04012 80 RESRLVLTLYGTTSSPDGGSNKQRMGPEELGWVSLPLFDFRGVLRQGSLLLGLWPPSKDNPLGPA 144 (171)
T ss_pred hhHEEEEEEEEEecCCccccccccccceEEEEEeEeeEcchhhhccCCEEEEeccCCccCcCCCC
Confidence 5589999999975433 3469999999983 5889999888853 344444333
No 163
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins. C2cd3 is a novel C2 domain-containing protein specific to vertebrates. C2cd3 functions in regulator of cilia formation, Hedgehog signaling, and mouse embryonic development. Mutations in C2cd3 mice resulted in lethality in some cases and exencephaly, a twisted body axis, and pericardial edema in others. The presence of calcium-dependent lipid-binding domains in C2cd3 suggests a potential role in vesicular transport. C2cd3 is also an interesting candidate for ciliopathy because of its orthology to certain cilia-related genetic disease loci on chromosome. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances inc
Probab=96.87 E-value=0.0026 Score=57.25 Aligned_cols=98 Identities=22% Similarity=0.383 Sum_probs=65.5
Q ss_pred EEEEEEEecCCCCC-------CCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec------
Q 008582 434 LKVTVYMGEGWYYD-------FPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV------ 500 (561)
Q Consensus 434 L~V~Visaq~L~~~-------~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~------ 500 (561)
|+|.|+.|.||... .+.......-..++||++.+.-+|.. .+++|+++.++|-|.|+..++|.+..
T Consensus 1 lsv~I~RA~GLqaAA~~la~~~~~l~y~a~VGVN~yv~i~lSFl~~~-e~r~TrtVArSFcPeF~Hh~Efpc~lv~~~~~ 79 (143)
T cd08683 1 LSVQIHRASGLQAAARALAEQDPSLQYSATVGVNSYVTIHLSFLPEK-ELRRTRTVARSFCPEFNHHVEFPCNLVVQRNS 79 (143)
T ss_pred CeEEeehhhhHHHHHHHHhhhCcccccceecccceEEEEEeccCCCC-ceeeccchhhhcCCCccceEEEecccEEEcCC
Confidence 46778887777420 00000111112578999998877654 46689999999999999999997541
Q ss_pred ---------CCceEEEEEEEecCCC----------CCCcceEEEEEeCccc
Q 008582 501 ---------PELALLRIEVHEYDMS----------EKDDFGGQTCLPVSEL 532 (561)
Q Consensus 501 ---------pela~Lrf~V~D~d~~----------~~dd~iGq~~lpL~~L 532 (561)
-+.+-+.|.||+.... .+|-+||.+.+|+..|
T Consensus 80 Ge~~sLAElLe~~eiil~vwHr~~~s~~~~~~~~~~~DilLG~v~IPl~~L 130 (143)
T cd08683 80 GEAISLAELLESAEIILEVWHRNPKSAGDTIKIETSGDILLGTVKIPLRDL 130 (143)
T ss_pred CccccHHHHhhcceEEeeeeecCCccccceeccCcCCcEEEEEEEeeHHHH
Confidence 1225688999996532 2345788888888776
No 164
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=96.74 E-value=0.0047 Score=61.68 Aligned_cols=97 Identities=21% Similarity=0.274 Sum_probs=66.0
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccc------cchHHHHHHHHhhh--cc-
Q 008582 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTA------PVELIKCLRSIKEY--AF- 192 (561)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts------~i~f~dvi~aI~~~--AF- 192 (561)
-|||-|.--. ....||..||-.||+|||=- + ++.+|.|-..+.. +..+..+.+.++.. +|
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~-d-g~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~ 72 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV-N-GDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAY 72 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE-C-CEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCC
Confidence 5999998543 45569999999999999953 2 3678888765543 35566666655443 23
Q ss_pred ccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccC
Q 008582 193 VASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFT 229 (561)
Q Consensus 193 ~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~ 229 (561)
....-|++|-||..-+...--.++.-.-+-+.+..+.
T Consensus 73 ~~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 73 NDPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 4456799999999998665434444444556666655
No 165
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.63 E-value=0.00046 Score=70.66 Aligned_cols=100 Identities=22% Similarity=0.270 Sum_probs=75.1
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC---ceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lr 507 (561)
...+..++..|.+|.. .+..+..||||+..+...-....+.+|++..|+.||.|||+..+.....+ .-.+|
T Consensus 92 ~~~~~~tl~~a~~lk~------~~~~~~~d~~~~~~llpga~kl~slr~~t~~n~lN~~w~etev~~~i~~~~~~~K~~R 165 (362)
T KOG1013|consen 92 SRMLDTTLDRAKGLKP------MDINGLADPYVKLHLLPGAGKLNSLRTKTTRNTLNPEWNETEVYEGITDDDTHLKVLR 165 (362)
T ss_pred hhhcceeechhcccch------hhhhhhcchHHhhhcccchhhhhhhhHHhhccCcCcceeccceecccccchhhhhhhh
Confidence 4578889999988632 34456789999988764333345678999999999999988666533222 34689
Q ss_pred EEEEecCCCCCCcceEEEEEeCcccCCCc
Q 008582 508 IEVHEYDMSEKDDFGGQTCLPVSELKQGI 536 (561)
Q Consensus 508 f~V~D~d~~~~dd~iGq~~lpL~~L~~Gy 536 (561)
+.|+|.+...+++++||.-+++..|.+-.
T Consensus 166 k~vcdn~~~~~~~sqGq~r~~lkKl~p~q 194 (362)
T KOG1013|consen 166 KVVCDNDKKTHNESQGQSRVSLKKLKPLQ 194 (362)
T ss_pred eeeccCcccccccCcccchhhhhccChhh
Confidence 99999998888999999988888886543
No 166
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.55 E-value=0.011 Score=56.11 Aligned_cols=64 Identities=20% Similarity=0.204 Sum_probs=51.1
Q ss_pred CCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccCCCH
Q 008582 132 QLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTP 209 (561)
Q Consensus 132 Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~ 209 (561)
+...+-|.++|..|+..||++||+|+.=-.| +.|||.|- -.+|.|+++..++ -+.|.+|.-...
T Consensus 9 ~~~pent~~a~~~a~~~g~~~iE~Dv~~tkD-g~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~~ 72 (189)
T cd08556 9 GEAPENTLAAFRKALEAGADGVELDVQLTKD-GVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEPT 72 (189)
T ss_pred CCCCchHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCCC
Confidence 3456899999999999999999999994333 36999997 7789999988776 345677776653
No 167
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. These are the only domains identified in the class III PI3Ks present in this cd. In addition some PI3Ks contain a Ras-binding domain and/or a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Ty
Probab=96.50 E-value=0.011 Score=55.68 Aligned_cols=85 Identities=16% Similarity=0.191 Sum_probs=60.7
Q ss_pred CCCceeEEEEeccCCCc-eeeecccCCCCCCCccccEEEEeeecCC---ceEEEEEEEecCCCCCCcceEEEEEeCc---
Q 008582 458 PPDFYARVGIAGVPADT-VMKKTKTLEDNWIPSWNEEFEFPLSVPE---LALLRIEVHEYDMSEKDDFGGQTCLPVS--- 530 (561)
Q Consensus 458 ~~DpyV~V~l~g~p~d~-~k~kTkvi~nn~nP~WNE~f~F~v~~pe---la~Lrf~V~D~d~~~~dd~iGq~~lpL~--- 530 (561)
.+|.||++.+......- .-..|+.+.-+..+.|||-+.|.|...+ .|.|+|+||+.+..++...+|.+.++|=
T Consensus 29 ~~~l~V~~~l~~~~~~L~~pv~T~~~~f~~~~~WnEwl~fpI~i~dLP~~a~L~iti~~~~~~~~~~~vg~~~~~lFd~~ 108 (159)
T cd08397 29 NSDLFVTCQVFDDGKPLTLPVQTSYKPFKNRRNWNEWLTLPIKYSDLPRNSQLAITIWDVSGTGKAVPFGGTTLSLFNKD 108 (159)
T ss_pred CCCEEEEEEEEECCEeccCcEEccccCCCCCcccceeEEcccchhcCChhheEEEEEEEecCCCCceEEEEEEEeeECCC
Confidence 35779999887422111 1224544443456889999999987544 4899999999875555679999999984
Q ss_pred -ccCCCceEEEcc
Q 008582 531 -ELKQGIRAVPLH 542 (561)
Q Consensus 531 -~L~~GyR~ipL~ 542 (561)
.|+.|...+.|.
T Consensus 109 g~Lr~G~~~l~lw 121 (159)
T cd08397 109 GTLRRGRQKLRVW 121 (159)
T ss_pred CcEecCCEEEEEE
Confidence 588999888875
No 168
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.47 E-value=0.0085 Score=59.25 Aligned_cols=40 Identities=20% Similarity=0.317 Sum_probs=33.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+-|.++|..|+..|+.+||+|++=-.| +.+||.|-.||
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkD-g~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGD-GTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCC-CCEEEEcCCCC
Confidence 35778999999999999999999996444 46999997765
No 169
>PLN02964 phosphatidylserine decarboxylase
Probab=96.47 E-value=0.0053 Score=69.58 Aligned_cols=87 Identities=22% Similarity=0.174 Sum_probs=70.5
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEE
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRI 508 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf 508 (561)
+..+...+++++|. . + -.|+|..+-..| .+..||.+.+++.||+||+...|.+...+..+.+|
T Consensus 51 ~~~~~~~~~~~~~~-~--~----------~~~~~~~~~~~g----~~~f~t~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 113 (644)
T PLN02964 51 DFSGIALLTLVGAE-M--K----------FKDKWLACVSFG----EQTFRTETSDSTDKPVWNSEKKLLLEKNGPHLARI 113 (644)
T ss_pred cccCeEEEEeehhh-h--c----------cCCcEEEEEEec----ceeeeeccccccCCcccchhhceEeccCCcceEEE
Confidence 34577889998886 1 1 137776555555 46789999999999999999999998888888999
Q ss_pred EEEecCCCCCCcceEEEEEeCccc
Q 008582 509 EVHEYDMSEKDDFGGQTCLPVSEL 532 (561)
Q Consensus 509 ~V~D~d~~~~dd~iGq~~lpL~~L 532 (561)
.|+|.+....++++|.+.+.+..+
T Consensus 114 ~~~~~~~~s~n~lv~~~e~~~t~f 137 (644)
T PLN02964 114 SVFETNRLSKNTLVGYCELDLFDF 137 (644)
T ss_pred EEEecCCCCHHHhhhheeecHhhc
Confidence 999999999999999998877654
No 170
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus). Tac2-N contains two C2 domains and a short C-terminus including a WHXL motif, which are key in stabilizing transport vesicles to the plasma membrane by binding to a plasma membrane. However unlike the usual carboxyl-terminal-type (C-type) tandem C2 proteins, it lacks a transmembrane domain, a Slp-homology domain, and a Munc13-1-interacting domain. Homology search analysis indicate that no known protein motifs are located in its N-terminus, making Tac2-N a novel class of Ca2+-independent, C-type tandem C2 proteins. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids, inositol polyphos
Probab=96.44 E-value=0.006 Score=51.29 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=59.7
Q ss_pred EEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCc--eEEEEEEEec
Q 008582 436 VTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPEL--ALLRIEVHEY 513 (561)
Q Consensus 436 V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pel--a~Lrf~V~D~ 513 (561)
|+|+.+.++..+-. ....+.-||+=-+ .+| .....||.+.....||+|+|+|.|.+....+ ..|.|.|+.
T Consensus 3 itv~~c~d~s~~~~-----~~e~~~i~ikg~~-tl~-kpv~~KsS~rrgs~d~~f~ETFVFqi~l~qL~~V~L~fsv~~- 74 (103)
T cd08684 3 ITVLKCKDLSWPSS-----CGENPTIYIKGIL-TLP-KPVHFKSSAKEGSNDIEFMETFVFAIKLQNLQTVRLVFKIQT- 74 (103)
T ss_pred EEEEEecccccccc-----cCcCCeeEEEEEE-ecC-CCccccchhhcCCCChhHHHHHHHHHHHhhccceEEEEEeec-
Confidence 56777777754311 1122223443222 122 2346688888888999999999999865444 457888887
Q ss_pred CCCCCCcceEEEEEeCcccCC
Q 008582 514 DMSEKDDFGGQTCLPVSELKQ 534 (561)
Q Consensus 514 d~~~~dd~iGq~~lpL~~L~~ 534 (561)
...+.+.||++.+.++++.+
T Consensus 75 -~~~RKe~iG~~sL~l~s~ge 94 (103)
T cd08684 75 -QTPRKRTIGECSLSLRTLST 94 (103)
T ss_pred -cCCccceeeEEEeecccCCH
Confidence 34568999999999998754
No 171
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.39 E-value=0.016 Score=57.60 Aligned_cols=40 Identities=18% Similarity=0.217 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkD-g~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKD-GELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEecCCcc
Confidence 45788999999999999999999995333 46999998876
No 172
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks). PI3Ks (AKA phosphatidylinositol (PtdIns) 3-kinases) regulate cell processes such as cell growth, differentiation, proliferation, and motility. PI3Ks work on phosphorylation of phosphatidylinositol, phosphatidylinositide (4)P (PtdIns (4)P),2 or PtdIns(4,5)P2. Specifically they phosphorylate the D3 hydroxyl group of phosphoinositol lipids on the inositol ring. There are 3 classes of PI3Ks based on structure, regulation, and specificity. All classes contain a C2 domain, a PIK domain, and a kinase catalytic domain. The members here are class I, gamma isoform PI3Ks and contain both a Ras-binding domain and a p85-binding domain. Class II PI3Ks contain both of these as well as a PX domain, and a C-terminal C2 domain containing a nuclear localization signal. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a cir
Probab=96.25 E-value=0.036 Score=53.18 Aligned_cols=104 Identities=14% Similarity=0.115 Sum_probs=65.3
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec---CCceEEE
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV---PELALLR 507 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lr 507 (561)
...++|+|.++..... +.......||++.+.....-....+|.....+.+|.|||-+.|.|.. |-.|.|+
T Consensus 9 ~~~friki~~~~~~~~-------~~~~~~~l~V~~~Ly~g~~~l~~~~T~~~~~~~~~~WnEwL~f~I~~~dLP~~arLc 81 (178)
T cd08399 9 DRKFRVKILGIDIPVL-------PRNTDLTVFVEANIQHGQQVLCQRRTSPKPFTEEVLWNTWLEFDIKIKDLPKGALLN 81 (178)
T ss_pred CCCEEEEEEeecccCc-------CCCCceEEEEEEEEEECCeecccceeeccCCCCCccccccEECccccccCChhhEEE
Confidence 3568888887763211 11112345788877642111122345555445579999999999864 4458999
Q ss_pred EEEEecCCC----------------CCCcceEEEEEeCc----ccCCCceEEEc
Q 008582 508 IEVHEYDMS----------------EKDDFGGQTCLPVS----ELKQGIRAVPL 541 (561)
Q Consensus 508 f~V~D~d~~----------------~~dd~iGq~~lpL~----~L~~GyR~ipL 541 (561)
|.||+.... .....||++.++|- .|++|...+.+
T Consensus 82 ~ti~~~~~~~~~~~~~~~~~~~~~~~~~~~l~wvn~~LFD~~~~Lr~G~~~L~~ 135 (178)
T cd08399 82 LQIYCGKAPALSSKKSAESPSSESKGKHQLLYYVNLLLIDHRFLLRTGEYVLHM 135 (178)
T ss_pred EEEEEEecCcccccccccccccccccccceEEEEEEEEEcCCCceecCCEEEEE
Confidence 999985211 12458899988874 58899876655
No 173
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.16 E-value=0.0072 Score=59.80 Aligned_cols=40 Identities=23% Similarity=0.255 Sum_probs=31.8
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
..+.|.++|..|+..|+++||+|||=-.| +.|||.|..++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkD-g~~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKD-GVPVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TT-S-EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCC-ceeEeccCCee
Confidence 34899999999999999999999995444 47999998654
No 174
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.13 E-value=0.015 Score=57.43 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+.|..+|..|+..||..||+|++=-.| +.|||.|-.||
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~D-g~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKD-GQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEEcCCch
Confidence 45788999999999999999999996444 46999998875
No 175
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=95.88 E-value=0.043 Score=56.23 Aligned_cols=137 Identities=17% Similarity=0.243 Sum_probs=90.1
Q ss_pred CCCCCCccceeecccccccccC---CCCC---CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHH
Q 008582 109 HDMTAPVSHYFIYTGHNSYLTG---NQLN---SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIK 182 (561)
Q Consensus 109 ~dm~~PLs~YfI~SSHNTYL~g---~Ql~---g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~d 182 (561)
.|-+.||++=.|--||||.-.. ..+. +.+--.....=|..|+|-+.|-|=. ...++||.. ...+|.+
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~-----~~~~~HG~~--~~~~~~d 95 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE-----DRRVCHGCL--KTYPVDV 95 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC-----CeEEECCCc--CCCcHHH
Confidence 4556899999999999987532 2211 1222234667789999999998854 257999963 2468999
Q ss_pred HHHHHhhhccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhccccCCCCCCCCCCCChhhccCc-EEEecCC
Q 008582 183 CLRSIKEYAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEILFTPGSECLKEFPSPESLKRR-IIISTKP 254 (561)
Q Consensus 183 vi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk~K-Ilik~K~ 254 (561)
|++.|+++-=....=-|||++......+......+.|.+.||+.|+.+. ...... +.++|.+| |||-.+.
T Consensus 96 vL~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~~-~~~~~~-TL~eL~~krVIviy~~ 166 (285)
T cd08619 96 VLNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQD-DSVFSK-TLAELLPKRVICIWKP 166 (285)
T ss_pred HHHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccCC-Cccccc-cHHHHhCCcEEEEEcC
Confidence 9999998643333345999996554322222355788999999998753 222222 67777654 5555554
No 176
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=95.84 E-value=0.026 Score=56.02 Aligned_cols=40 Identities=23% Similarity=0.372 Sum_probs=34.0
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+.|.++|..|+..||++||+|++=-.| +.|||.|-.|+
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkD-g~~Vv~HD~~l 52 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKD-GQLVVIHDETV 52 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCc
Confidence 46889999999999999999999995444 46999997765
No 177
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=95.68 E-value=0.095 Score=53.94 Aligned_cols=139 Identities=17% Similarity=0.209 Sum_probs=89.0
Q ss_pred CCCccceeecccccccccCCCCCCCCChHHHHHHHhCCCcEEEEEe---eCC----CCCCCceEEeCCcccccchHHHHH
Q 008582 112 TAPVSHYFIYTGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDI---WPN----SKKDNVDVLHGGTMTAPVELIKCL 184 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~---Wdg----~~~~~piv~HG~Tlts~i~f~dvi 184 (561)
+.||++..|-.|||+.-.+---.+..--.....=|..|+|-+.|=| ++. ...++-..+|| +-...+|.+++
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg--~~~~~~l~~~L 83 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHN--MIPGQGFDTFL 83 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEee--ccCCCcHHHHH
Confidence 5799999999999987554322222323346677899999987755 221 01123344555 44567999999
Q ss_pred HHHhhhccccCCCceEEEecc-----CC-CHHHHHHHHHHHHHHhhccccCCC--CCCCCCCCChhhccC---cEEEecC
Q 008582 185 RSIKEYAFVASEYPVVITLED-----HL-TPDLQAKVAEMVTQTLGEILFTPG--SECLKEFPSPESLKR---RIIISTK 253 (561)
Q Consensus 185 ~aI~~~AF~~S~yPvIlSlE~-----Hc-s~~qQ~~ma~~l~~i~Gd~L~~~~--~~~~~~lPSP~~Lk~---KIlik~K 253 (561)
+.|+.+.=....=-|||+|-+ || .+.+ ..+.+.+.+.|++.-+.+. ......-|+.++|.. ++||--+
T Consensus 84 ~~i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~-~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~~gkrvIv~y~ 162 (281)
T cd08620 84 QDVVTFLKANPTEIVVVHITWDGFDNDCARPSA-QEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQTGKRLIVLFG 162 (281)
T ss_pred HHHHHHHHHCCCcEEEEEEEcCCccccccChhH-HHHHHHHHHHhhccCccccCCCccccccCcHHHHHhCCCEEEEEEc
Confidence 999987545555679999943 44 3554 5778889999988544432 111234578898854 4555443
No 178
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.52 E-value=0.051 Score=54.88 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=34.3
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
=+-|.++|..|+..||..||+|++=-.| +.|||.|-.||.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkD-g~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKD-GVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCC-CCEEEeCCCccC
Confidence 4778999999999999999999995444 469999999873
No 179
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2.7.1.137 from EC) is an enzyme that phosphorylates phosphoinositides on the 3-hydroxyl group of the inositol ring. The usually N-terminal C2 domain interacts mainly with the scaffolding helical domain of the enzyme, and exhibits only minor interactions with the catalytic domain []. The domain consists of two four-stranded antiparallel beta-sheets that form a beta-sandwich. Isolated C2 domain binds multilamellar phospholipid vesicles which suggests that this domain could play a role in membrane association. Membrane attachment by C2 domains is typically mediated by the loops connecting beta-strand regions that in other C2 domain-containing proteins are calcium-binding region; GO: 0016303 1-phosphatidylinositol-3-kinase activity, 0046854 phosphatidylinositol phosphorylation, 0048015 phosphatidylinositol-mediated signaling, 0005942 phosphatidylinositol 3-kinase complex; PDB: 1E8W_A 1E8X_A 1E7V_A 1E90_A 1E7U_A 3L54_A 1E8Z_A 2CHX_A 3ML8_A 3OAW_A ....
Probab=95.52 E-value=0.04 Score=50.71 Aligned_cols=82 Identities=23% Similarity=0.325 Sum_probs=55.2
Q ss_pred ceeEEEEeccCCCce--eeecccCCCC-CCCccccEEEEeee---cCCceEEEEEEEecCCCCCC----cceEEEEEeCc
Q 008582 461 FYARVGIAGVPADTV--MKKTKTLEDN-WIPSWNEEFEFPLS---VPELALLRIEVHEYDMSEKD----DFGGQTCLPVS 530 (561)
Q Consensus 461 pyV~V~l~g~p~d~~--k~kTkvi~nn-~nP~WNE~f~F~v~---~pela~Lrf~V~D~d~~~~d----d~iGq~~lpL~ 530 (561)
.||++.+.-....-. ...|+.+.-+ .+|.|||.+.|.+. .|-.|.|.|+|+..+..... ..||++.+||=
T Consensus 4 ~~V~~~ly~g~~~L~~p~~~T~~~~~~~~~~~W~e~l~F~i~i~~LPr~a~L~~~l~~~~~~~~~~~~~~~lgw~n~~lF 83 (142)
T PF00792_consen 4 LYVECQLYHGGEPLCNPVQSTSYVPFSFSRPKWDEWLTFPIPISDLPREARLCFTLYGVDSKKKSKKKKVPLGWVNLPLF 83 (142)
T ss_dssp EEEEEEEEETTEESS-EEEE-S-EESS-SSEEEEEEEEEEEEGGGS-TTEEEEEEEEEEECSTTT--EEEEEEEEEEESB
T ss_pred EEEEEEEEECCEEeecCeeeccccccccccceEeeEEEeecChHHCChhHeEEEEEEEecCCCccccceeEEEEEEEEeE
Confidence 467777652221111 2356655555 68999999999976 46669999999997755444 69999999984
Q ss_pred ----ccCCCceEEEcc
Q 008582 531 ----ELKQGIRAVPLH 542 (561)
Q Consensus 531 ----~L~~GyR~ipL~ 542 (561)
.|++|...++|.
T Consensus 84 d~~~~L~~G~~~L~lW 99 (142)
T PF00792_consen 84 DYRGQLRQGPQKLSLW 99 (142)
T ss_dssp -TTSBBEEEEEEEE-E
T ss_pred CCCCcccCCCEEEEEE
Confidence 478898888775
No 180
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.13 E-value=0.11 Score=51.98 Aligned_cols=39 Identities=26% Similarity=0.389 Sum_probs=33.0
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|..++.+|+..||..||+|+|=-.| +.|||.|=.|+
T Consensus 12 pENTl~af~~A~~~G~d~iE~DV~~TkD-g~~Vv~HD~~l 50 (235)
T cd08565 12 PENTLEGFRKALELGVDAVEFDVHLTAD-GEVVVIHDPTL 50 (235)
T ss_pred CccHHHHHHHHHHcCCCEEEEeEEEccC-CCEEEECCChh
Confidence 4778999999999999999999994333 36999998775
No 181
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.01 E-value=0.09 Score=52.77 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=32.7
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
+-|.++|..|+..||+.||+|+.=-.| +.|||.|=.|+
T Consensus 15 ENTl~af~~A~~~g~d~iE~DV~~T~D-g~~vv~HD~~l 52 (240)
T cd08566 15 ENSLAAIEAAIDLGADIVEIDVRRTKD-GVLVLMHDDTL 52 (240)
T ss_pred ccHHHHHHHHHHcCCCEEEEEeeEcCC-CCEEEECCCCC
Confidence 778999999999999999999996444 46999997665
No 182
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=94.86 E-value=0.11 Score=44.01 Aligned_cols=62 Identities=13% Similarity=0.343 Sum_probs=49.3
Q ss_pred HHHHHHHHhhC-C---CCcCHHHHHHHHHHH--cCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE-N---GTMTVDHLHRFLIEV--QKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~-~---~~l~~~~~~~Fl~~~--Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|-.+|.+|++ + ++|+.++|+..|.++ .++. .+.+++.++++.... -+.+.++++.|..+|.
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k-~t~~ev~~m~~~~D~------d~dG~Idf~EFv~lm~ 78 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSK-LQDAEIAKLMEDLDR------NKDQEVNFQEYVTFLG 78 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCC-CCHHHHHHHHHHhcC------CCCCCCcHHHHHHHHH
Confidence 47789999996 2 599999999999752 4664 689999999987652 2346799999998876
No 183
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=94.78 E-value=0.018 Score=64.37 Aligned_cols=58 Identities=24% Similarity=0.507 Sum_probs=47.2
Q ss_pred eecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCC---------------------------------C---CCc
Q 008582 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS---------------------------------E---KDD 520 (561)
Q Consensus 477 ~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~---------------------------------~---~dd 520 (561)
+-|.+...++||.|+|.|.|.|....-..+.+-+||+|.- + .||
T Consensus 179 katsvk~~TLnPkW~EkF~F~IeDv~tDqfHlDIWDHDDe~sv~dAvs~LNeV~G~kG~GRyFKqv~qSARans~d~tDD 258 (1103)
T KOG1328|consen 179 KATSVKKKTLNPKWSEKFQFTIEDVQTDQFHLDIWDHDDEESVLDAVSSLNEVTGFKGIGRYFKQVTQSARANSDDCTDD 258 (1103)
T ss_pred hhcccccccCCcchhhheeeehhccccceeeeecccCCccHHHHHHHHHHhhhhcchhHHHHHHHHHHHHhcCCCccccc
Confidence 4577778889999999999999866666789999998732 1 279
Q ss_pred ceEEEEEeCcccCC
Q 008582 521 FGGQTCLPVSELKQ 534 (561)
Q Consensus 521 ~iGq~~lpL~~L~~ 534 (561)
|+|...+||.++.+
T Consensus 259 FLGciNipl~EiP~ 272 (1103)
T KOG1328|consen 259 FLGCINIPLAEIPP 272 (1103)
T ss_pred cccccccchhcCCc
Confidence 99999999999853
No 184
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.65 E-value=0.12 Score=52.47 Aligned_cols=39 Identities=28% Similarity=0.451 Sum_probs=32.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGT 173 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~T 173 (561)
.-+-|..+|..|+..|+..||+|+|=-.| +.|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKD-NEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCC-CCEEEEcCCc
Confidence 45788999999999999999999994333 4699999863
No 185
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=94.54 E-value=0.16 Score=50.41 Aligned_cols=78 Identities=22% Similarity=0.344 Sum_probs=53.4
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc------------------------ccc-hHHHHHHHH
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------------------------APV-ELIKCLRSI 187 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------------------------s~i-~f~dvi~aI 187 (561)
..-+-|.+++..|+..||+.||+|++=-.| +.|||.|=.|+. .+| +|.||++.+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~D-g~~Vv~HD~~l~R~t~~~g~v~~~t~~eL~~l~~~g~~iPtL~evl~~~ 89 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKD-GKLVVLHDENLKRVGGVDLKVKELTYKELKKLHPGGELIPTLEEVFRAL 89 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCC-CCEEEECCCcccccCCCCceeecCCHHHHhhCCCCCCcCCCHHHHHHhc
Confidence 345788999999999999999999995433 469999977652 124 589999876
Q ss_pred hhhccccCCCceEEEeccCCCHHHHHHHHHHHH
Q 008582 188 KEYAFVASEYPVVITLEDHLTPDLQAKVAEMVT 220 (561)
Q Consensus 188 ~~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~ 220 (561)
++. +.|-||.-.. .....+++.++
T Consensus 90 ~~~--------~~l~iEiK~~-~~~~~~~~~l~ 113 (226)
T cd08568 90 PND--------AIINVEIKDI-DAVEPVLEIVE 113 (226)
T ss_pred CCC--------cEEEEEECCc-cHHHHHHHHHH
Confidence 431 2466666543 22334444444
No 186
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.19 E-value=0.029 Score=58.69 Aligned_cols=127 Identities=24% Similarity=0.213 Sum_probs=85.4
Q ss_pred CCCCCCCCcccccccccce-eeeecccCCCCcccCCCCCCCCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEe
Q 008582 390 RVDSSNYNPLIGWSHGAQM-VAFNMQTGPHNEVFDPKVKLPAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIA 468 (561)
Q Consensus 390 RidSSNf~P~~~W~~G~Qm-VALN~QnG~~Gyvl~P~~~~p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~ 468 (561)
=+|+.- |.|..|=|. +|=|+|--.. .....++.|.|.|+.|.+|.... .....++|||+|.+.
T Consensus 237 FvDglG----P~q~VgRq~la~P~mg~iq~-------~~~d~~g~l~vEii~ar~l~~k~-----~~k~~~apyVkVYlL 300 (405)
T KOG2060|consen 237 FVDGLG----PAQLVGRQTLAAPNMGDIQI-------ALMDSKGDLEVEIIRARGLVVKP-----GSKSLPAPYVKVYLL 300 (405)
T ss_pred hhcccC----chhhhhhhhhcCcccccchh-------hhhcccCceeEEEEecccccccC-----CcccccCceeEEEEc
Confidence 356665 578888886 4555551000 01123568999999999996421 112357899999998
Q ss_pred ccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEEEEe-cCCCCCCcceEEEEEeCcccC
Q 008582 469 GVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHE-YDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 469 g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D-~d~~~~dd~iGq~~lpL~~L~ 533 (561)
+...-..+++|+...++..|.+-....|.-..+ ...|.+.||- +....++.|+|-+.+-+.+|.
T Consensus 301 ~~g~c~ak~ktk~A~kT~~plyqq~l~f~~sp~-~k~Lq~tv~gdygRmd~k~fmg~aqi~l~eL~ 365 (405)
T KOG2060|consen 301 ENGFCIAKKKTKSARKTLDPLYQQQLSFDQSPP-GKYLQGTVWGDYGRMDHKSFMGVAQIMLDELN 365 (405)
T ss_pred CCCceecccccccccccCchhhhhhhhhccCCC-ccEEEEEEeccccccchHHHhhHHHHHhhhhc
Confidence 766555688999999999998888788775433 5578888885 344455678887766666553
No 187
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=94.01 E-value=0.23 Score=48.15 Aligned_cols=47 Identities=15% Similarity=0.124 Sum_probs=41.7
Q ss_pred ChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 138 SDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 138 s~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
+..++.+|+.. .-||+|+|.- | +.+||.|=.|+..-.+|+||++++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-D-g~lVV~HD~~l~~~PtLeEvL~~~~ 54 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-G-GQLVISHDPFVKNGELLEDWLKEYN 54 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-C-CeEEEECCCCCCCCCCHHHHHHhcc
Confidence 57899999998 9999999986 4 5799999999988888999998874
No 188
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=93.72 E-value=0.072 Score=54.27 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=34.6
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|.++|..|+..||++||+|++=-.| +.|||.|-.|+.
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~D-g~~Vv~HD~~l~ 53 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKD-GQVVVFHDWDLD 53 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEEcCCccc
Confidence 4778999999999999999999996544 479999998864
No 189
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=93.49 E-value=0.08 Score=53.24 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=34.6
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+-|.++|.+|+..||+.||+|++=-.| +.|||+|-.||.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkD-g~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKD-GVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 45788999999999999999999994333 479999998874
No 190
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only]
Probab=93.45 E-value=0.095 Score=55.53 Aligned_cols=120 Identities=18% Similarity=0.208 Sum_probs=84.1
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-CCc--------
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-PEL-------- 503 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-pel-------- 503 (561)
.|.+.|.+|++++..-... -.|.||++++.-......+.||++++++..|.|+|.|...+.- +.+
T Consensus 368 elel~ivrg~~~pvp~gp~------hld~fvr~efpl~nD~~qk~kt~vik~t~SPdfde~fklni~rg~~~nr~fqR~f 441 (523)
T KOG3837|consen 368 ELELAIVRGQKNPVPGGPM------HLDQFVRLEFPLENDSRQKLKTDVIKVTPSPDFDEDFKLNIRRGPGLNREFQRRF 441 (523)
T ss_pred HhHHHHhhcccCCCCCCch------hHHhhhcccccccccccccCccceeeCCCCCCcccceeeeccCCCcccHHHHHHH
Confidence 4666777777776432111 1356888887644323456789999999999999999888752 111
Q ss_pred --eEEEEEEEecCCC-CCCcceEEEEEeCcccCCCc---eEEEccCCCCCcccCeEEEEEEEE
Q 008582 504 --ALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQGI---RAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 504 --a~Lrf~V~D~d~~-~~dd~iGq~~lpL~~L~~Gy---R~ipL~d~~G~~~~~atLlv~~~f 560 (561)
--+.|.++..... .+|.++|.+-+.|.-|..-. .+++|+| |+..-|+.|-|++.+
T Consensus 442 kr~g~kfeifhkggf~rSdkl~gt~nikle~Len~cei~e~~~l~D--GRK~vGGkLevKvRi 502 (523)
T KOG3837|consen 442 KRLGKKFEIFHKGGFNRSDKLTGTGNIKLEILENMCEICEYLPLKD--GRKAVGGKLEVKVRI 502 (523)
T ss_pred HhcCeeEEEeeccccccccceeceeeeeehhhhcccchhhceeccc--cccccCCeeEEEEEE
Confidence 2378999997644 35779999999888775543 4689987 666667789888754
No 191
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=92.82 E-value=0.12 Score=52.39 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=34.1
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|..+|..|+..||..||+||+=-.| +.|||.|-.||.
T Consensus 15 PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVV~HD~~l~ 54 (252)
T cd08574 15 PENTLMSFEKALEHGVYGLETDVTISYD-GVPFLMHDRTLR 54 (252)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEeEccC-CcEEEeCCCccc
Confidence 4778999999999999999999995444 469999998863
No 192
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.37 E-value=0.15 Score=51.41 Aligned_cols=39 Identities=21% Similarity=0.204 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.||
T Consensus 14 pENT~~af~~A~~~G~d~vE~DV~lTkD-g~~Vv~HD~~l 52 (256)
T cd08601 14 PEHTFAAYDLAREMGADYIELDLQMTKD-GVLVAMHDETL 52 (256)
T ss_pred CCchHHHHHHHHHcCCCEEEEEeeECCC-CeEEEeCCCcc
Confidence 4889999999999999999999996444 46999999886
No 193
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=91.84 E-value=0.23 Score=50.67 Aligned_cols=42 Identities=14% Similarity=0.126 Sum_probs=34.7
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+-|..+|..|+..||..||+||+=-.| +.|||.|=.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKD-GVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCC-CCEEEeCCCchh
Confidence 445778999999999999999999994333 369999988763
No 194
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=91.83 E-value=0.34 Score=53.51 Aligned_cols=83 Identities=22% Similarity=0.302 Sum_probs=66.3
Q ss_pred eecccCCCCCCCccccEEEEeeecCCceEEEEEEEecCCC----CCCcceEEEEEeCccc-CCCceEEEccCCCCCcccC
Q 008582 477 KKTKTLEDNWIPSWNEEFEFPLSVPELALLRIEVHEYDMS----EKDDFGGQTCLPVSEL-KQGIRAVPLHDRKGERYKS 551 (561)
Q Consensus 477 ~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~----~~dd~iGq~~lpL~~L-~~GyR~ipL~d~~G~~~~~ 551 (561)
.+|.++.+..||.|-+.|.....+.....|+|.|+|-+.. ...+|+|++...+..+ ..+-+.++|.-+.++....
T Consensus 43 ~rte~i~~~~~p~f~~~~~l~y~fE~vQ~l~~~~~~~~~~~~~l~~~dflg~~~c~l~~ivs~~~~~~~l~~~~~~~~~~ 122 (529)
T KOG1327|consen 43 GRTEVIRNVLNPFFTKKFLLQYRFEKVQLLRFEVYDIDSRTPDLSSADFLGTAECTLSQIVSSSGLTGPLLLKPGKNAGS 122 (529)
T ss_pred cceeeeeccCCccceeeechhheeeeeeeEEEEEeecCCccCCcchhcccceeeeehhhhhhhhhhhhhhhcccCccCCc
Confidence 4788999999999999998888888888999999997643 3468999998888765 4455667777666677777
Q ss_pred eEEEEEEE
Q 008582 552 VKLLMHFE 559 (561)
Q Consensus 552 atLlv~~~ 559 (561)
+++.|+++
T Consensus 123 g~iti~ae 130 (529)
T KOG1327|consen 123 GTITISAE 130 (529)
T ss_pred ccEEEEee
Confidence 78888765
No 195
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=91.82 E-value=0.22 Score=53.06 Aligned_cols=42 Identities=19% Similarity=0.199 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.=+.|.++|..|+..|+.-||+|+|=-.| +.|||.|..+|.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkD-g~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKD-DQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccC-CcEEEeCCchhc
Confidence 344889999999999999999999995444 469999998764
No 196
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=91.82 E-value=0.19 Score=50.11 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.3
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|..+|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 12 PENTl~Af~~A~~~gad~iE~DV~lTkD-g~~Vv~HD~~l~ 51 (229)
T cd08581 12 PENTLVGFRAAVDAGARFVEFDVQLSAD-GVPVVFHDDTLL 51 (229)
T ss_pred CccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEECCCccc
Confidence 4778999999999999999999996444 479999998874
No 197
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=91.77 E-value=0.21 Score=51.92 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|.++|..|+..||+.||+|+|=-.| ++|||.|=.|+
T Consensus 40 PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVV~HD~~l 78 (300)
T cd08612 40 LENTMEAFEHAVKVGTDMLELDVHLTKD-GQVVVSHDENL 78 (300)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeECcC-CeEEEECCccc
Confidence 3778999999999999999999995334 47999998876
No 198
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=91.68 E-value=0.21 Score=52.41 Aligned_cols=42 Identities=17% Similarity=0.189 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+.|.++|..|+..||..||+||+=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKD-DKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcC-CcEEEeCCchhh
Confidence 445788999999999999999999995433 369999998873
No 199
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=91.53 E-value=0.23 Score=51.05 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=38.3
Q ss_pred cccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 127 YLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 127 YL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
|+.+.-+.=+-|..+|..|+..|+..||+|++=-.| +.|||+|=.|+.
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkD-g~~VV~HD~~l~ 59 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKD-LVPVVYHDFTLR 59 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCeeE
Confidence 444444555889999999999999999999995333 479999988874
No 200
>KOG1327 consensus Copine [Signal transduction mechanisms]
Probab=91.51 E-value=0.49 Score=52.28 Aligned_cols=80 Identities=23% Similarity=0.348 Sum_probs=57.7
Q ss_pred CCCCCCCceeEEEEe-ccCCCceeeecccCCCCCCCccccEEEEe---eecCC-ceEEEEEEEecCCCCCCcceEEEEEe
Q 008582 454 DAYSPPDFYARVGIA-GVPADTVMKKTKTLEDNWIPSWNEEFEFP---LSVPE-LALLRIEVHEYDMSEKDDFGGQTCLP 528 (561)
Q Consensus 454 ~~~~~~DpyV~V~l~-g~p~d~~k~kTkvi~nn~nP~WNE~f~F~---v~~pe-la~Lrf~V~D~d~~~~dd~iGq~~lp 528 (561)
+.++.+|||.++.-. +......-.+|.+++|++||.|-+. ... +...+ -..+.+.++|++..+++++||++..+
T Consensus 152 d~f~ksd~~l~~~~~~~d~s~~~~~~tEv~~n~l~p~w~~~-~i~~~~l~~~~~~~~~~i~~~d~~~~~~~~~ig~~~tt 230 (529)
T KOG1327|consen 152 DFFSKSDPYLEFYKRVDDGSTQMLYRTEVVKNTLNPQWAPF-SISLQSLCSKDGNRPIQIECYDYDSNGKHDLIGKFQTT 230 (529)
T ss_pred cccccCCcceEEEEecCCCceeeccccceeccCCCCccccc-ccchhhhcccCCCCceEEEEeccCCCCCcCceeEeccc
Confidence 557788999876543 2222233568999999999999653 222 21222 35688999999988888999999999
Q ss_pred CcccCC
Q 008582 529 VSELKQ 534 (561)
Q Consensus 529 L~~L~~ 534 (561)
+..++.
T Consensus 231 ~~~~~~ 236 (529)
T KOG1327|consen 231 LSELQE 236 (529)
T ss_pred HHHhcc
Confidence 999874
No 201
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=91.50 E-value=0.21 Score=50.67 Aligned_cols=40 Identities=15% Similarity=0.185 Sum_probs=34.2
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
.-+-|..+|..|+..||..||+|+|=-.| +.|||.|-.++
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkD-g~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKD-GVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCC-CcEEEECCCCc
Confidence 44778999999999999999999995444 46999998876
No 202
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=90.96 E-value=0.23 Score=51.65 Aligned_cols=40 Identities=18% Similarity=0.265 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+.|..+|..|+..|+..||+|++=-.| +.+||.|-.+|.
T Consensus 14 PENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVv~HD~~l~ 53 (302)
T cd08571 14 PDSTDLAYQKAISDGADVLDCDVQLTKD-GVPICLPSINLD 53 (302)
T ss_pred CcchHHHHHHHHHcCCCEEEeeeeEcCC-CcEEEeCCchhc
Confidence 4778999999999999999999995444 469999998874
No 203
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=90.86 E-value=0.25 Score=50.64 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=33.2
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
+-+..++..|+..||..||+|+|=-.| +.|||+|=.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkD-g~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRD-GVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcC-CeEEEECCCce
Confidence 678999999999999999999995434 46999999888
No 204
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=90.77 E-value=0.25 Score=51.26 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=34.5
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.=+.|..+|..|+..||..||+|++=-.| +.|||.|-.+|-
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkD-g~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKD-GVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccC-CCEEEeccchhh
Confidence 34788999999999999999999995444 469999987763
No 205
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=90.58 E-value=0.29 Score=51.31 Aligned_cols=49 Identities=20% Similarity=0.300 Sum_probs=38.6
Q ss_pred cccccccCCCCCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 123 GHNSYLTGNQLNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 123 SHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.|.-| .-..-+.|..+|..|+..||..||+|++=-.| +.|||.|-.|+.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkD-G~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKD-GVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCC-CCEEEeCCCccc
Confidence 66653 22335888999999999999999999996444 479999988764
No 206
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=90.30 E-value=0.28 Score=50.42 Aligned_cols=39 Identities=15% Similarity=0.112 Sum_probs=34.1
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+-+..+|..|+..||..||+||+=-.| +.|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkD-g~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKD-LVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccC-CEEEEeCCCeec
Confidence 889999999999999999999995433 479999998875
No 207
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=89.80 E-value=0.47 Score=47.26 Aligned_cols=41 Identities=17% Similarity=0.261 Sum_probs=34.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+.|.++|..|+..|++.||+|++=-.| +.|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkD-g~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKD-GVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccC-CcEEEeCCCccc
Confidence 45789999999999999999999994333 469999988764
No 208
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=89.76 E-value=0.95 Score=38.09 Aligned_cols=62 Identities=18% Similarity=0.302 Sum_probs=47.1
Q ss_pred HHHHHHHHhhCC----CCcCHHHHHHHHHHHcCCCCCC----HHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN----GTMTVDHLHRFLIEVQKEDKAS----KEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~----~~l~~~~~~~Fl~~~Q~~~~~~----~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|.+|+.. ..|+.++|+..|...-++ ..+ .+++..++..+.. .+.+.++++.|..++.
T Consensus 9 ~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~------d~dG~I~f~eF~~~~~ 78 (88)
T cd05030 9 TIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDT------NQDGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 477899999943 689999999999854443 244 7888888887641 1346799999998876
No 209
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=89.75 E-value=0.35 Score=50.53 Aligned_cols=42 Identities=14% Similarity=0.187 Sum_probs=35.5
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+.|.++|..|+..||..||+|++=-.| +.|||.|-.+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkD-g~lVv~HD~~l~ 53 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKD-GVLICRHEPELS 53 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCC-CcEEEeCCCccc
Confidence 445889999999999999999999995444 479999998864
No 210
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins. Dock-A is one of 4 classes of Dock family proteins. The members here include: Dock180/Dock1, Dock2, and Dock5. Most of these members have been shown to be GEFs specific for Rac. Dock5 has not been well characterized to date, but most likely also is a GEF specific for Rac. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-A members contain a proline-rich region and a SH3 domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangemen
Probab=89.72 E-value=2.6 Score=41.08 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=50.8
Q ss_pred eeeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCCC-C---CcceEEEEEeCc-----ccCCCceEEEcc
Q 008582 475 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSE-K---DDFGGQTCLPVS-----ELKQGIRAVPLH 542 (561)
Q Consensus 475 ~k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~~-~---dd~iGq~~lpL~-----~L~~GyR~ipL~ 542 (561)
...+|-+..-+-+|.|+|++...+... +.+.|+|.+++..... + ...+|-+.+||- .|+.|-+.++++
T Consensus 53 se~~S~V~Yh~~~P~W~EtIKl~lP~~~~~~~HL~FtfrH~S~~~~kd~~e~pfg~s~lpL~~~~gt~l~dG~H~L~vY 131 (196)
T cd08694 53 DEYKSVIYYQVDKPKWFETFKVAIPIEDFKSSHLRFTFKHRSSNEAKDKSEKPFALSFVKLMQENGTTLTDGEHDLIVY 131 (196)
T ss_pred eeEEEEEEeecCCCCCceeEEEecChhhCCCeEEEEEEEeeccccccCCCCCceEEEEEeeeccCCcEEccCCEEEEEE
Confidence 356777777778999999998887543 4578999998754221 1 247899999984 388999888886
No 211
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=89.71 E-value=0.32 Score=48.99 Aligned_cols=41 Identities=22% Similarity=0.276 Sum_probs=34.7
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+-|.+++..|+..|+..||+||.=-.| +.|||.|=.|+.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~D-g~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSAD-GEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCC-CCEEEECCCccc
Confidence 44778999999999999999999995444 469999988874
No 212
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=89.59 E-value=1.5 Score=37.39 Aligned_cols=63 Identities=13% Similarity=0.335 Sum_probs=46.5
Q ss_pred HHHHHHHHhhCC-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
-|..+|.+||++ ..|+..+|+..|+.+=.. ...+++.+..|+..... .+.+.++|..|..++.
T Consensus 9 ~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~------n~Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 9 KMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDD------CRDGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 467899999977 899999999999765431 12356777888776542 2346799999998875
No 213
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=89.58 E-value=3.4 Score=44.15 Aligned_cols=107 Identities=21% Similarity=0.279 Sum_probs=68.5
Q ss_pred HHHHHhCCCcEEEEEeeCCC-CCCCceEEeCCcccccchHHHHHHHHhhhcccc--CCCceEEEeccC---CCHHHHHHH
Q 008582 142 IIRALQKGVRVIELDIWPNS-KKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVA--SEYPVVITLEDH---LTPDLQAKV 215 (561)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg~-~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~--S~yPvIlSlE~H---cs~~qQ~~m 215 (561)
...=|..|.|-+.|=|=-.+ +.++-.+.||.- .++|.||++.|+++.=.. ..=-|||.+-.. -....|.+.
T Consensus 90 I~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~l 166 (380)
T PTZ00268 90 VRAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKF 166 (380)
T ss_pred HHHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHH
Confidence 44557889999888774322 224456667652 478999999999854321 234577777542 234555566
Q ss_pred HHHHHHHhhccccCCCCCCCCCCCChhhcc-----CcEEEecCCC
Q 008582 216 AEMVTQTLGEILFTPGSECLKEFPSPESLK-----RRIIISTKPP 255 (561)
Q Consensus 216 a~~l~~i~Gd~L~~~~~~~~~~lPSP~~Lk-----~KIlik~K~~ 255 (561)
.+.|+. |||+|. |+.... . -+.++|- .+|+|-.+.+
T Consensus 167 l~~L~~-~~d~l~-p~~~~~-~-~TL~~LW~~~~~~rVIi~Y~~~ 207 (380)
T PTZ00268 167 FRELDR-LSDRFI-PVDVPL-T-TPLEILWRVSRRRRIFLVVASG 207 (380)
T ss_pred HHHHHH-hcCeec-CCcccc-c-CcHHHHHhcCCCcEEEEEEccc
Confidence 666766 999987 433322 2 3788887 6788887543
No 214
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=89.54 E-value=1.6 Score=37.15 Aligned_cols=63 Identities=13% Similarity=0.266 Sum_probs=46.9
Q ss_pred HHHHHHHHhhC--C-C-CcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE--N-G-TMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~--~-~-~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
++..+|+.|.. + + .|+.++|+..|..+.++ ...+.+.+.+|++.+-. -+.+.++++.|..+|.
T Consensus 11 ~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~------n~dG~Idf~EF~~l~~ 80 (93)
T cd05026 11 TLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDS------NKDNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCC------CCCCCCCHHHHHHHHH
Confidence 57778999993 3 4 59999999999876432 12366789999988751 1346799999999875
No 215
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins. Dock-B is one of 4 classes of Dock family proteins. The members here include: Dock3/MOCA (modifier of cell adhesion) and Dock4. Most of these members have been shown to be GEFs specific for Rac, although Dock4 has also been shown to interact indirectly with the Ras family GTPase Rap1, probably through Rap regulatory proteins. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-B members contain a SH3 domain upstream of the C2 domain and a proline-rich region downstream. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold int
Probab=89.42 E-value=1.3 Score=42.92 Aligned_cols=68 Identities=22% Similarity=0.383 Sum_probs=47.2
Q ss_pred eeeecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCCCC--CcceEEEEEeCcc-----cCCCceEEEcc
Q 008582 475 VMKKTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMSEK--DDFGGQTCLPVSE-----LKQGIRAVPLH 542 (561)
Q Consensus 475 ~k~kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~~~--dd~iGq~~lpL~~-----L~~GyR~ipL~ 542 (561)
...+|-+..-+-+|.|+|++.+.+... +.+.|+|.+++.....+ ...+|-+.+||-. |+.|.+-+-|+
T Consensus 53 se~~S~V~yH~~~P~W~EtiKi~lP~~~~~~~HL~FtfrH~S~~~k~~~~pfg~s~lpL~~~~gt~l~Dg~H~L~vy 129 (189)
T cd08695 53 SEYRSFVLYHNNSPRWNETIKLPIPIDKFRGSHLRFEFRHCSTKDKGEKKLFGFSFVPLMREDGTTLPDGSHELYVY 129 (189)
T ss_pred ceEEEEEEEcCCCCCCceeEEEecChhhCCCeeEEEEEEEeeeccCCCCCceEEEEEeecccCCcEEcCCcEEEEEE
Confidence 356788888788999999998887643 45789998887543221 2567777777722 66776666554
No 216
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain. Outlier of C2 family.
Probab=89.31 E-value=2.3 Score=36.72 Aligned_cols=76 Identities=21% Similarity=0.223 Sum_probs=46.0
Q ss_pred eEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCce-eeecccCCCCCCCccccEEEEeeec---CCceEEEE
Q 008582 433 TLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSV---PELALLRI 508 (561)
Q Consensus 433 ~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~-k~kTkvi~nn~nP~WNE~f~F~v~~---pela~Lrf 508 (561)
.+.+.+...++...... .+..+.||++.+......-. ...|+.+.-+..+.|||-+.|.+.. |-.|.|+|
T Consensus 12 ~~~~~~~~~~~~~l~~~------~~~~~l~v~~~l~~g~~~l~~pv~t~~~~~~~~~~Wnewl~f~i~i~~LPr~a~L~~ 85 (100)
T smart00142 12 NLVITIALIHGIPLNWS------RDYSDLYVEIQLYHGGKLLCLPVSTSYKPFFPSVKWNEWLTFPIQISDLPREARLCI 85 (100)
T ss_pred ceEEEEEEeeCCCcccc------cCcceEEEEEEEEECCEEccCcEEecccCCCCCcccceeEEccCchhcCChhhEEEE
Confidence 35566666666543211 11146799998864221111 2245444333458999999998764 44589999
Q ss_pred EEEecC
Q 008582 509 EVHEYD 514 (561)
Q Consensus 509 ~V~D~d 514 (561)
.||+..
T Consensus 86 ~i~~~~ 91 (100)
T smart00142 86 TIYEVK 91 (100)
T ss_pred EEEEee
Confidence 999854
No 217
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=89.17 E-value=1.2 Score=37.67 Aligned_cols=63 Identities=10% Similarity=0.222 Sum_probs=45.8
Q ss_pred HHHHHHHHhhC--C--CCcCHHHHHHHHHHHcC---CCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE--N--GTMTVDHLHRFLIEVQK---EDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~--~--~~l~~~~~~~Fl~~~Q~---~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
-|..+|.+|+. + ..|+.++|+.||..+-. ....+...+.+++..+.. -+.+.++++.|..+|.
T Consensus 10 ~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~------d~DG~I~f~EF~~l~~ 79 (89)
T cd05023 10 SLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDL------NSDGQLDFQEFLNLIG 79 (89)
T ss_pred HHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCC------CCCCcCcHHHHHHHHH
Confidence 46788999883 2 38999999999998731 112356778888886541 1346799999998875
No 218
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=88.80 E-value=1.4 Score=37.32 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=48.7
Q ss_pred HHHHHHHHhhC-C--CCcCHHHHHHHHHHHcCCCCCCH-HHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSE-N--GTMTVDHLHRFLIEVQKEDKASK-EDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~-~--~~l~~~~~~~Fl~~~Q~~~~~~~-~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.|..+|..|.. + ++|+..+|+..|..+=++ .++. +++..+|..... -..+.++++.|..+|.
T Consensus 9 ~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~-~ls~~~~v~~mi~~~D~------d~DG~I~F~EF~~l~~ 74 (89)
T cd05022 9 TLVSNFHKASVKGGKESLTASEFQELLTQQLPH-LLKDVEGLEEKMKNLDV------NQDSKLSFEEFWELIG 74 (89)
T ss_pred HHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhh-hccCHHHHHHHHHHhCC------CCCCCCcHHHHHHHHH
Confidence 57889999987 4 899999999999975344 3566 789999887541 2346799999998876
No 219
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=88.60 E-value=0.54 Score=46.92 Aligned_cols=39 Identities=23% Similarity=0.134 Sum_probs=33.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCcc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTM 174 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tl 174 (561)
-+-|..++..|+..|++-||+|++=-.| +.+||.|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkD-g~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSD-GVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccC-CCEEEEECCcC
Confidence 4778999999999999999999995444 47999998876
No 220
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=88.33 E-value=0.92 Score=33.99 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=40.0
Q ss_pred CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 38 GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 38 ~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+.|+.++|+.+| ..++....+.+++..|+..+... +.+.++++.|..+|.
T Consensus 3 G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~------~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 3 GKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTD------GDGYISFDEFISMMQ 52 (54)
T ss_dssp SEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTS------SSSSEEHHHHHHHHH
T ss_pred CEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccC------CCCCCCHHHHHHHHH
Confidence 568999999999 66666437899999999988632 346799999999874
No 221
>cd08679 C2_DOCK180_related C2 domains found in Dedicator Of CytoKinesis 1 (DOCK 180) and related proteins. Dock180 was first identified as an 180kd proto-oncogene product c-Crk-interacting protein involved in actin cytoskeletal changes. It is now known that it has Rac-specific GEF activity, but lacks the conventional Dbl homology (DH) domain. There are 10 additional related proteins that can be divided into four classes based on sequence similarity and domain organization: Dock-A which includes Dock180/Dock1, Dock2, and Dock5; Dock-B which includes Dock3/MOCA (modifier of cell adhesion) and Dock4; Dock-C which includes Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3; and Dock-D, which includes Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Most of members of classes Dock-A and Dock-B are the GEFs specific for Rac. Those of Dock-D are Cdc42-specific GEFs while those of Dock-C are the GEFs for both. All Dock180-related proteins have two common homolo
Probab=88.05 E-value=1.8 Score=41.33 Aligned_cols=67 Identities=18% Similarity=0.237 Sum_probs=49.2
Q ss_pred ecccCCCCCCCccccEEEEeeecC--CceEEEEEEEecCCC-----CCCcceEEEEEeCcc-----cCCCceEEEccCC
Q 008582 478 KTKTLEDNWIPSWNEEFEFPLSVP--ELALLRIEVHEYDMS-----EKDDFGGQTCLPVSE-----LKQGIRAVPLHDR 544 (561)
Q Consensus 478 kTkvi~nn~nP~WNE~f~F~v~~p--ela~Lrf~V~D~d~~-----~~dd~iGq~~lpL~~-----L~~GyR~ipL~d~ 544 (561)
-|.++..+-+|.|+|+|...+... +...|.|.+++-+.. .....+|-+.+||-. ++.|...+|++-.
T Consensus 55 ~~sv~~~~k~p~f~deiKi~LP~~l~~~~HLlFtf~hv~~~~~~~~~~~~~~g~a~lpL~~~~g~~i~dg~~~L~v~k~ 133 (178)
T cd08679 55 YTSVVYYHKNPVFNDEIKIQLPADLTPQHHLLFTFYHVSSKKKQGDKEETPFGYAFLPLMDKDGAFIKDGDHTLPVYKY 133 (178)
T ss_pred EEEEEEcCCCCCCceeEEEecCCccCCCeEEEEEEEccccccccCCCccceEEEEEEeccccCCcEEcCCCEEEEEEec
Confidence 344444448899999998887532 457899999986532 225689999999987 7888888888643
No 222
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=88.01 E-value=0.59 Score=48.60 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=35.4
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+.-+.|..+|..|+..||..||+|++=-.| +.|||.|=.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkD-G~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKD-GVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCC-CCEEEecccccc
Confidence 445889999999999999999999995444 469999988763
No 223
>PF15627 CEP76-C2: CEP76 C2 domain
Probab=87.94 E-value=8.5 Score=36.15 Aligned_cols=125 Identities=20% Similarity=0.200 Sum_probs=81.8
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCC------
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPE------ 502 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pe------ 502 (561)
|.+.-|.++|+.|.-...... +.-+.++.-+.+.++- ..++++|+.+....+|.|+|.|-|++....
T Consensus 6 ~~~~yL~l~vlgGkAFld~l~----~~~~~~~s~~~l~l~f---~~QRF~S~~Vp~~~eP~f~e~Flf~l~~~~~~~~~~ 78 (156)
T PF15627_consen 6 PGRRYLHLRVLGGKAFLDHLQ----EPEGQVCSTFTLHLHF---RGQRFRSKPVPCACEPDFNEEFLFELPRDSFGAGST 78 (156)
T ss_pred CCceEEEEEEeCchhHhhhhh----ccCCCCceEEEEEEEe---cCceEecCCcccccCCCCCCcEEEEecccccccccc
Confidence 456789999998874421100 0002233444455542 136889999999999999999999986432
Q ss_pred ---c----eEEEEEEEecCCCCCCcceEEEEEeCcc-cCCCce----EEEccCCCCC-cccCeEEEEEEEE
Q 008582 503 ---L----ALLRIEVHEYDMSEKDDFGGQTCLPVSE-LKQGIR----AVPLHDRKGE-RYKSVKLLMHFEF 560 (561)
Q Consensus 503 ---l----a~Lrf~V~D~d~~~~dd~iGq~~lpL~~-L~~GyR----~ipL~d~~G~-~~~~atLlv~~~f 560 (561)
+ .-|.+.|--.|..+...++|...+.-.. |..|+. .|.|....++ ..+-+.|-+++++
T Consensus 79 ~~~lls~~~pihivli~~d~~~~~~Lv~s~~ldWR~vL~s~~~~~~~~vEL~G~~~e~kv~~GiL~l~lEL 149 (156)
T PF15627_consen 79 ATTLLSISDPIHIVLIRTDPSGETTLVGSHFLDWRKVLCSGNGSTSFTVELCGVGPESKVPVGILDLRLEL 149 (156)
T ss_pred hhHhhcCCCceEEEEEEecCCCceEeeeeceehHHHHhccCCCccceeEEEeccCCCCccceeEEEEEEEe
Confidence 1 2466777666666666899998887654 567774 4677765555 3445678888875
No 224
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen []. Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).
Probab=87.85 E-value=13 Score=33.69 Aligned_cols=114 Identities=19% Similarity=0.173 Sum_probs=68.4
Q ss_pred ceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCC-CCCCccccEEEEeeec---C-----C
Q 008582 432 KTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLED-NWIPSWNEEFEFPLSV---P-----E 502 (561)
Q Consensus 432 ~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~n-n~nP~WNE~f~F~v~~---p-----e 502 (561)
-.+.|+|....+++. .+..|.|.............|..... +..-.|||+|.+.+.. . +
T Consensus 7 f~~~l~i~~l~~~p~------------~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~k~~~~~ 74 (143)
T PF10358_consen 7 FQFDLTIHELENLPS------------SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDKKSKEFQ 74 (143)
T ss_pred EEEEEEEEEeECcCC------------CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcCCCCcEe
Confidence 356777777777652 12234444443211111234443332 3557899999988652 1 1
Q ss_pred ceEEEEEEEecCCCCCCcceEEEEEeCcccCCC-----ceEEEccCCCCCcccCeEEEEEEEE
Q 008582 503 LALLRIEVHEYDMSEKDDFGGQTCLPVSELKQG-----IRAVPLHDRKGERYKSVKLLMHFEF 560 (561)
Q Consensus 503 la~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~G-----yR~ipL~d~~G~~~~~atLlv~~~f 560 (561)
--.+.|.|+.....++...+|.+.+.|.....- .+.++|... +-.+|+|.|.|.+
T Consensus 75 ~K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~~~~~~~~~~l~~~---~~~~a~L~isi~~ 134 (143)
T PF10358_consen 75 PKELKFSVFEVDGSGKKKVLGKVSINLAEYANEDEEPITVRLLLKKC---KKSNATLSISISL 134 (143)
T ss_pred eEEEEEEEEEecCCCccceEEEEEEEHHHhhCcCCCcEEEEEeCccC---CCCCcEEEEEEEE
Confidence 246889998874334336999999999987552 245566655 4557888888875
No 225
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A.
Probab=87.57 E-value=1.8 Score=41.51 Aligned_cols=67 Identities=18% Similarity=0.214 Sum_probs=39.0
Q ss_pred eeecccCCCCCCCccccEEEEeeec--CCceEEEEEEEecCCCCCC---cceEEEEEeCcc----cCCCceEEEcc
Q 008582 476 MKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMSEKD---DFGGQTCLPVSE----LKQGIRAVPLH 542 (561)
Q Consensus 476 k~kTkvi~nn~nP~WNE~f~F~v~~--pela~Lrf~V~D~d~~~~d---d~iGq~~lpL~~----L~~GyR~ipL~ 542 (561)
...|.+...+-+|.|+|+|.+++.. .+...|.|.+++.....+. ..+|.+.+||-. +..|-..+|++
T Consensus 60 ~~~S~v~yh~k~P~f~deiKi~LP~~l~~~~HLlFtf~h~s~~~~~~~~~~~g~a~lpL~~~g~~i~dg~~~L~v~ 135 (184)
T PF14429_consen 60 SYYSSVYYHNKNPQFNDEIKIQLPPDLFPKHHLLFTFYHVSCKESKEKSKPFGYAFLPLMDNGTIIQDGEHELPVY 135 (184)
T ss_dssp -EE----TT-SS-EEEEEEEEEE-CCCCTTEEEEEEEEE---SSSS-SS-EEEEEEEESB-TS-B--SEEEEEEEE
T ss_pred EEEEEEEecCCCCCccEEEEEEcCchhcccEEEEEEEEeeccccccCccceeEEEEEEeeeCCeEecCCCEEEEEE
Confidence 3467777777899999999988764 3457899999986532211 588888888864 44566677775
No 226
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=87.54 E-value=0.67 Score=48.01 Aligned_cols=42 Identities=14% Similarity=0.181 Sum_probs=35.1
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
..-+.|..+|..|+..||.-||+||+=-.| +.|||+|=.++.
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkD-G~lVv~HD~~l~ 60 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKD-GVPVIYHDFTIS 60 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEcCCcce
Confidence 345789999999999999999999995444 479999988763
No 227
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=86.61 E-value=0.79 Score=48.07 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=35.3
Q ss_pred CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 133 LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
..-+-|..+|..|+..||.-||+|++=-.| +.|||.|=.|+.
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkD-G~lVV~HD~tL~ 75 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYD-GVPFLMHDFTLK 75 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccC-CCEEEeCCCccc
Confidence 445788999999999999999999995444 469999988874
No 228
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis]
Probab=86.01 E-value=0.51 Score=55.12 Aligned_cols=84 Identities=20% Similarity=0.296 Sum_probs=60.8
Q ss_pred CCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEe-eec--------CCceEEEEEEEecCCCCCCcceEEE
Q 008582 455 AYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFP-LSV--------PELALLRIEVHEYDMSEKDDFGGQT 525 (561)
Q Consensus 455 ~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~-v~~--------pela~Lrf~V~D~d~~~~dd~iGq~ 525 (561)
..+-.|||+.|...+ ..+.|-++.+++||.|+.+..|. +.. ...-.+.|.|+|.|..+.++|.|..
T Consensus 223 k~~~sdp~a~v~f~~-----qs~~T~~v~~tl~ptwdq~~~f~~~ei~ge~~~~~~~ppi~v~e~yd~dr~g~~ef~gr~ 297 (1105)
T KOG1326|consen 223 KDDESDPDAAVEFCG-----QSKETEVVPGTLNPTWDQTIIFDEVEIYGEAHLVLKNPPIRVFEVYDLDRSGINEFKGRK 297 (1105)
T ss_pred cccCCCchhhhhccc-----ccceeEeecCcCCCCccceeeccceeecCccchhhcCCCeEEEEeehhhhhchHHhhccc
Confidence 345678999998876 45679999999999999998885 221 1123678999999999999999986
Q ss_pred EEeC-cccCCC-ceEEEccC
Q 008582 526 CLPV-SELKQG-IRAVPLHD 543 (561)
Q Consensus 526 ~lpL-~~L~~G-yR~ipL~d 543 (561)
.... --+.+| ..+.|+..
T Consensus 298 ~~~p~V~~~~p~lkw~p~~r 317 (1105)
T KOG1326|consen 298 KQRPYVMVQCPALKWVPTMR 317 (1105)
T ss_pred ccceEEEecCCccceEEeec
Confidence 5433 333333 45667653
No 229
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=85.18 E-value=2.9 Score=35.24 Aligned_cols=64 Identities=13% Similarity=0.239 Sum_probs=48.0
Q ss_pred hHHHHHHHHhh-CC--C-CcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYS-EN--G-TMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~-~~--~-~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.+|.++|..|. .+ + .|+.++|+..|+..-+.. ..+.+++.+|+..+.. -+.+.++++.|..++.
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~------d~~G~I~f~eF~~l~~ 79 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDE------NGDGEVDFQEFVVLVA 79 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCC------CCCCcCcHHHHHHHHH
Confidence 46888999996 43 6 499999999998643331 2477889999998752 1246799999998876
No 230
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=83.19 E-value=5.1 Score=29.31 Aligned_cols=59 Identities=20% Similarity=0.438 Sum_probs=44.5
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 27 i~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
+..+|..|-.+ +.|+.++|...++... . ..+.+.+..++.++... +.+.+++++|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~-~-~~~~~~~~~~~~~~~~~------~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLG-E-GLSEEEIDEMIREVDKD------GDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCeEeHHHHHHHh
Confidence 56788888654 7899999999998653 3 35777888888887521 23569999998876
No 231
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=82.74 E-value=1.2 Score=44.59 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=32.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+-|..+|..|+..|+ -||+|++=-.| +.|||.|=.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~D-g~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTAD-GEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCC-CCEEEeccchHh
Confidence 3678899999999999 89999996444 479999987763
No 232
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=82.73 E-value=1.4 Score=44.22 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.8
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCC
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~ 172 (561)
+-|.++|..|+..|+.+||+|+.=-.| +.+||.|=+
T Consensus 20 ENTl~Af~~A~~~gad~iE~Dv~lTkD-g~lVv~HD~ 55 (257)
T COG0584 20 ENTLAAFELAAEQGADYIELDVQLTKD-GVLVVIHDE 55 (257)
T ss_pred cchHHHHHHHHHcCCCEEEeeccCccC-CcEEEeccc
Confidence 778999999999999999999996544 479999977
No 233
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=82.65 E-value=1.3 Score=46.16 Aligned_cols=39 Identities=26% Similarity=0.461 Sum_probs=33.7
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
+-+.++|..|+..|+..||+|++--.| +.+||.|=.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkD-g~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKD-GEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccC-CeEEEEecCccc
Confidence 677899999999999999999996444 469999988873
No 234
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=82.23 E-value=1.8 Score=45.01 Aligned_cols=38 Identities=5% Similarity=-0.087 Sum_probs=31.7
Q ss_pred CChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 137 CSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 137 Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
++...++.|...|++-||+|++=-.| +.|||+|-+++.
T Consensus 16 ~~~~sfvtAsslgad~VE~DVqLTkD-gvpVV~HD~~i~ 53 (300)
T cd08578 16 KDGNSFVTASSLSGEYLRVKVCVLKD-GTPVVAPEWFVP 53 (300)
T ss_pred CCchhHHHHHHcCCCEEEEEEEECcC-CEEEEECCCceE
Confidence 46789999999999999999994333 369999998874
No 235
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=82.09 E-value=5.7 Score=33.70 Aligned_cols=61 Identities=15% Similarity=0.150 Sum_probs=46.7
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..+-.+ +.|+.++|..+|+.. ..+.+++..|+..+.. ...+.++++.|..+|.
T Consensus 9 ~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~----~~~~~ev~~i~~~~d~------~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 9 KAKYEQIFRSLDKNQDGTVTGAQAKPILLKS----GLPQTLLAKIWNLADI------DNDGELDKDEFALAMH 71 (96)
T ss_pred HHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc----CCCHHHHHHHHHHhcC------CCCCCcCHHHHHHHHH
Confidence 35677788888643 899999999999872 3577888888887652 1246799999998876
No 236
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=81.93 E-value=1.6 Score=46.66 Aligned_cols=38 Identities=13% Similarity=0.122 Sum_probs=32.4
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCC
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGG 172 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~ 172 (561)
.-+-|.++|..|+..|+.-||+|++=-.| +.|||.|=.
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkD-g~lVV~HD~ 66 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKD-RELVCRHSQ 66 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCC
Confidence 34778999999999999999999995444 469999985
No 237
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=81.32 E-value=1.7 Score=46.20 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=34.1
Q ss_pred CCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 134 NSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 134 ~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
.-+-+..+|..|+..||.-||+|++=-.| +.|||.|=.|+.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkD-GvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLD-GVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccC-CcEEEECCCccc
Confidence 34778999999999999999999995434 469999988763
No 238
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=80.08 E-value=7.5 Score=32.73 Aligned_cols=63 Identities=16% Similarity=0.311 Sum_probs=46.7
Q ss_pred HHHHHHHHhh-C-C-C-CcCHHHHHHHHHHHc---CCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYS-E-N-G-TMTVDHLHRFLIEVQ---KEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~-~-~-~-~l~~~~~~~Fl~~~Q---~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
+|..+|..|. . + + .|+.++|+..|+.+= .....+.+++.++|..... -+.+.++++.|..++.
T Consensus 9 ~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~------n~dG~v~f~eF~~li~ 78 (88)
T cd05027 9 ALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDS------DGDGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 6888999997 3 3 6 599999999998611 1123578889999987642 1346799999998875
No 239
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=80.07 E-value=2.2 Score=31.30 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=23.0
Q ss_pred HHHHHHHHhh---CC-CCcCHHHHHHHHHHH
Q 008582 26 AVKSMFDQYS---EN-GTMTVDHLHRFLIEV 52 (561)
Q Consensus 26 ei~~if~~~~---~~-~~l~~~~~~~Fl~~~ 52 (561)
-|..+|.+|| ++ ..|++.+|+..|+++
T Consensus 7 ~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~E 37 (44)
T PF01023_consen 7 TIIDVFHKYAGKEGDKDTLSKKELKELLEKE 37 (44)
T ss_dssp HHHHHHHHHHTSSSSTTSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCCeEcHHHHHHHHHHH
Confidence 4778999999 34 899999999999865
No 240
>PTZ00183 centrin; Provisional
Probab=79.82 E-value=7.9 Score=35.14 Aligned_cols=65 Identities=18% Similarity=0.395 Sum_probs=49.6
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
...++..+|..|-.+ +.|+.++|..+|...+ . ..+.+++..++..+... +.+.++++.|..++..
T Consensus 88 ~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~-~-~l~~~~~~~~~~~~d~~------~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 88 PREEILKAFRLFDDDKTGKISLKNLKRVAKELG-E-TITDEELQEMIDEADRN------GDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCCC------CCCcCcHHHHHHHHhc
Confidence 456788999888644 7899999999998654 3 36888899998887621 2356999999988863
No 241
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=79.27 E-value=5.4 Score=30.88 Aligned_cols=63 Identities=17% Similarity=0.471 Sum_probs=41.4
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 27 VKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 27 i~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
|..+|..|=.+ +.|+.++|..+++..... .+.+.+.+.++..-.. ...-+.+.+++++|..++
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~--~~~~~~~~~~~~~~~~--~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRD--MSDEESDEMIDQIFRE--FDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSH--STHHHHHHHHHHHHHH--HTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhccc--ccHHHHHHHHHHHHHH--hCCCCcCCCcHHHHhccC
Confidence 67899998533 999999999999987653 2344444443332210 111235689999999875
No 242
>KOG2258 consensus Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=79.01 E-value=2.1 Score=45.39 Aligned_cols=40 Identities=25% Similarity=0.326 Sum_probs=34.5
Q ss_pred CCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+.|..+|.+|...|+.|||+|+-...| +.+|+.|=-|..
T Consensus 82 penT~~A~~~a~~~Gad~ie~dV~~TsD-g~~v~l~d~~~~ 121 (341)
T KOG2258|consen 82 PENTLAAYKKAIADGADLIELDVQMTSD-GVPVILHDSTTV 121 (341)
T ss_pred CcccHHHHHHHHHcCCcEEEeccccCCC-CceEEeecCcce
Confidence 3678999999999999999999999877 568999976554
No 243
>PTZ00184 calmodulin; Provisional
Probab=78.75 E-value=6.8 Score=34.98 Aligned_cols=65 Identities=17% Similarity=0.380 Sum_probs=45.0
Q ss_pred CchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 23 APDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 23 ~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
....+..+|..|-.+ +.|+.++|..+|..... ..+.+.+..|+.++.. -+.+.++++.|..+|.+
T Consensus 82 ~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~--~~~~~~~~~~~~~~d~------~~~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 82 SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGE--KLTDEEVDEMIREADV------DGDGQINYEEFVKMMMS 148 (149)
T ss_pred HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCC--CCCHHHHHHHHHhcCC------CCCCcCcHHHHHHHHhc
Confidence 345677788888533 77888888888876532 3567777878776542 12356899999888764
No 244
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=78.01 E-value=0.5 Score=31.15 Aligned_cols=14 Identities=29% Similarity=0.503 Sum_probs=12.8
Q ss_pred cCCCceEEEeccCC
Q 008582 194 ASEYPVVITLEDHL 207 (561)
Q Consensus 194 ~S~yPvIlSlE~Hc 207 (561)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
No 245
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=76.41 E-value=4.7 Score=34.32 Aligned_cols=62 Identities=15% Similarity=0.281 Sum_probs=37.6
Q ss_pred HHHHHHHhhCC-CCcCHHHHHHHHHHHcCCCC---------CCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCC
Q 008582 27 VKSMFDQYSEN-GTMTVDHLHRFLIEVQKEDK---------ASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGD 96 (561)
Q Consensus 27 i~~if~~~~~~-~~l~~~~~~~Fl~~~Q~~~~---------~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~ 96 (561)
.+++|..++.. +.|+...|..||++..+-+. ..+..+++.++.- ..+..++.+.|+.+|+++
T Consensus 5 yRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--------~~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 5 YRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--------QLSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--------TT-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--------CCCCccCHHHHHHHHHhC
Confidence 57899999875 89999999999998775321 1222233333321 024579999999999977
No 246
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=75.45 E-value=12 Score=28.68 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=42.0
Q ss_pred HHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 28 KSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 28 ~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+|..+-.+ +.++.++|..+|... + .+.+.+..++..+... +.+.++++.|...+.
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~-g---~~~~~~~~i~~~~d~~------~~g~i~~~ef~~~~~ 60 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS-G---LPRSVLAQIWDLADTD------KDGKLDKEEFAIAMH 60 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-C---CCHHHHHHHHHHhcCC------CCCcCCHHHHHHHHH
Confidence 3567777543 899999999999863 2 3778889998876521 235799999987664
No 247
>cd08696 C2_Dock-C C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-C is one of 4 classes of Dock family proteins. The members here include: Dock6/Zir1, Dock7/Zir2, and Dock8/Zir3. Dock-C members are GEFs for both Rac and Cdc42. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-C members contain a functionally uncharacterized domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II, distinguished by a circular permutation involving their N- and C-terminal beta strand
Probab=74.45 E-value=16 Score=35.11 Aligned_cols=68 Identities=21% Similarity=0.234 Sum_probs=46.7
Q ss_pred eeeecccCCCCCCCccccEEEEeeec--CCceEEEEEEEecCCCCC------CcceEEEEEeCc---ccCCCceEEEcc
Q 008582 475 VMKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMSEK------DDFGGQTCLPVS---ELKQGIRAVPLH 542 (561)
Q Consensus 475 ~k~kTkvi~nn~nP~WNE~f~F~v~~--pela~Lrf~V~D~d~~~~------dd~iGq~~lpL~---~L~~GyR~ipL~ 542 (561)
....|.+...|-+|.|+|++...+.. .+..-|+|+.++-+...+ ...+|-+.+||- .|+.|-..+|+.
T Consensus 54 ~~~~S~V~yHnk~P~f~DEiKi~LP~~l~~~hHLlFtF~Hvs~~~k~~~~~~e~~~Gys~lPL~~~g~L~~g~~~LpV~ 132 (179)
T cd08696 54 TEAYTAVTYHNKSPDFYDEIKIKLPADLTDNHHLLFTFYHISCQKKQEGGSVETPIGYTWLPLLRNGRLQSGEFNLPVS 132 (179)
T ss_pred eeEEEEEEEeCCCCcccceEEEEcCCCCCCCeEEEEEEEEeeccccccCCCccceEEEEEEeeecCCEEecCCEEEEEE
Confidence 34577888888899999998887753 345789999998553221 246888888874 355555555553
No 248
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=74.03 E-value=14 Score=30.52 Aligned_cols=65 Identities=15% Similarity=0.267 Sum_probs=47.4
Q ss_pred chHHHHHHHHhhC--C--CCcCHHHHHHHHHHHcCCC---CCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSE--N--GTMTVDHLHRFLIEVQKED---KASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~--~--~~l~~~~~~~Fl~~~Q~~~---~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..++..+|..|-. + +.|+.++|..+|+..=+.. ..+.+.+..|+..+.. .+.+.++++.|..+|.
T Consensus 7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~------~~~g~I~f~eF~~~~~ 78 (88)
T cd00213 7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDV------NKDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhcc------CCCCcCcHHHHHHHHH
Confidence 3567788999977 4 8899999999997521221 1357788888887752 1246799999999876
No 249
>cd08697 C2_Dock-D C2 domains found in Dedicator Of CytoKinesis (Dock) class C proteins. Dock-D is one of 4 classes of Dock family proteins. The members here include: Dock9/Zizimin1, Dock10/Zizimin3, and Dock11/Zizimin2/ACG (activated Cdc42-associated GEF). Dock-D are Cdc42-specific GEFs. In addition to the C2 domain (AKA Dock homology region (DHR)-1, CED-5, Dock180, MBC-zizimin homology (CZH) 1) and the DHR-2 (AKA CZH2, or Docker), which all Dock180-related proteins have, Dock-D members contain a functionally uncharacterized domain and a PH domain upstream of the C2 domain. DHR-2 has the catalytic activity for Rac and/or Cdc42, but is structurally unrelated to the DH domain. The C2/DHR-1 domains of Dock180 and Dock4 have been shown to bind phosphatidylinositol-3, 4, 5-triphosphate (PtdIns(3,4,5)P3). The PH domain broadly binds to phospholipids and is thought to be involved in targeting the plasma membrane. The C2 domain was first identified in PKC. C2 domains fold into an 8-stande
Probab=72.86 E-value=11 Score=36.43 Aligned_cols=68 Identities=18% Similarity=0.213 Sum_probs=48.0
Q ss_pred eeeecccCCCCCCCccccEEEEeeec--CCceEEEEEEEecCCC--C-------CCcceEEEEEeCcc----cCCCceEE
Q 008582 475 VMKKTKTLEDNWIPSWNEEFEFPLSV--PELALLRIEVHEYDMS--E-------KDDFGGQTCLPVSE----LKQGIRAV 539 (561)
Q Consensus 475 ~k~kTkvi~nn~nP~WNE~f~F~v~~--pela~Lrf~V~D~d~~--~-------~dd~iGq~~lpL~~----L~~GyR~i 539 (561)
....|.+...+-+|.|+|++...+.. .+..-|+|+.++-+.. . ....+|-+.+||-. |..|...+
T Consensus 56 ~~~~s~V~yh~k~P~f~dEiKI~LP~~l~~~hHLlFtFyHvsc~~~~k~~~~~~~e~~~Gys~lPLl~~~~~l~~g~~~L 135 (185)
T cd08697 56 TSAYAAVLHHNQNPEFYDEIKIELPTQLHEKHHLLFTFYHVSCDINKKGKKKDGVETPVGYAWLPLLKDKGRLNSEEQTP 135 (185)
T ss_pred eEEEEEEEEcCCCCccceeEEEecCCcCCCCeeEEEEEEeeccccccccccCCCccceEEEEEEeeecCCCEEecCCEee
Confidence 34577787788899999998887653 3457899999986521 1 12468888888865 66666666
Q ss_pred Ecc
Q 008582 540 PLH 542 (561)
Q Consensus 540 pL~ 542 (561)
|..
T Consensus 136 pV~ 138 (185)
T cd08697 136 PVA 138 (185)
T ss_pred eEE
Confidence 654
No 250
>KOG0904 consensus Phosphatidylinositol 3-kinase catalytic subunit (p110) [Signal transduction mechanisms]
Probab=72.28 E-value=18 Score=42.42 Aligned_cols=103 Identities=16% Similarity=0.211 Sum_probs=60.2
Q ss_pred CceEEEEEEEecCCCCCCCCCccCCCCCCCcee--EEEEe-ccCCCceeeecccCCCCCCCccccEEEEeee---cCCce
Q 008582 431 KKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYA--RVGIA-GVPADTVMKKTKTLEDNWIPSWNEEFEFPLS---VPELA 504 (561)
Q Consensus 431 ~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV--~V~l~-g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~---~pela 504 (561)
.+.++|+++.+.+...+ ...|.+| +..+. |...=+..+.|.-+...-+|.||+.+.|+|. .|..|
T Consensus 342 ~~~frI~l~~is~~n~~---------~t~~~kV~V~~~lyhG~e~Lc~~~sTs~v~~~~~~~Wn~~leFDI~i~DLPr~A 412 (1076)
T KOG0904|consen 342 DRPFRIKLVGISKVNLP---------ETVDLKVFVEAGLYHGTEVLCKTRSTSEVPGCSFPLWNEWLEFDIYIKDLPRMA 412 (1076)
T ss_pred CCceEEEEeeccccCCC---------cccceEEEEEEEEEECCeehhcccccCCCCCccchhccceeEeeeecCCCChhh
Confidence 35678888877755321 1123344 44443 3211112245555554568999999999876 45568
Q ss_pred EEEEEEEecC----------------CCCCCcceEEEEEeCc----ccCCCceEEEcc
Q 008582 505 LLRIEVHEYD----------------MSEKDDFGGQTCLPVS----ELKQGIRAVPLH 542 (561)
Q Consensus 505 ~Lrf~V~D~d----------------~~~~dd~iGq~~lpL~----~L~~GyR~ipL~ 542 (561)
.|.|.|+.-- .....-.+|++.+-|- .|+.|-+.+.+.
T Consensus 413 rLc~~i~~v~~~~~s~~~s~~~~~kk~k~~~~plaWvN~~lfD~kd~LrtG~~~Lh~W 470 (1076)
T KOG0904|consen 413 RLCLAIYAVKAKAKSKKNSAESTKKKSKKEHCPLAWVNLMLFDHKDQLRTGEYVLHMW 470 (1076)
T ss_pred hheeeeeEeechhccccccchhhhhccccccCceEEEeeeeeechhhhhcCceEEEec
Confidence 8888887641 1122347888777663 578897655443
No 251
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=71.67 E-value=15 Score=30.97 Aligned_cols=64 Identities=16% Similarity=0.341 Sum_probs=47.5
Q ss_pred hHHHHHHHHhhC---C-CCcCHHHHHHHHHHHcCC---CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSE---N-GTMTVDHLHRFLIEVQKE---DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~---~-~~l~~~~~~~Fl~~~Q~~---~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++...|..|.. + +.|+.++|+..|+...+. ...+.+++..++..+.. -+.+.++++.|..++.
T Consensus 8 ~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~------~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 8 ESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQ------NRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCC------CCCCcCcHHHHHHHHH
Confidence 468889999964 3 689999999999863321 13577889999987652 1246799999998775
No 252
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=71.04 E-value=4.7 Score=41.97 Aligned_cols=40 Identities=13% Similarity=-0.069 Sum_probs=33.4
Q ss_pred CCCChHHHHHHHhCCCc--EEEEEeeCCCCCCCceEEeCCccc
Q 008582 135 SDCSDVPIIRALQKGVR--VIELDIWPNSKKDNVDVLHGGTMT 175 (561)
Q Consensus 135 g~Ss~e~Y~~aL~~GCR--cvElD~Wdg~~~~~piv~HG~Tlt 175 (561)
-+.+.++|..|+..|+. -||+|++=-.| +.|||.|..+|.
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkD-gvlVv~HD~~L~ 55 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKD-GVGICLPDLNLD 55 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcC-CcEEEeCCcccc
Confidence 37889999999999995 69999995444 369999998873
No 253
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=70.85 E-value=7.8 Score=36.26 Aligned_cols=62 Identities=16% Similarity=0.348 Sum_probs=46.5
Q ss_pred HHHHHHHhh----CC-CCcCHHHHHHHHHHHcCC-CCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 27 VKSMFDQYS----EN-GTMTVDHLHRFLIEVQKE-DKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 27 i~~if~~~~----~~-~~l~~~~~~~Fl~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
|+.+|..|+ .+ ..|+-..|.+++++.+=. ..++..++.-|+.++... ..+.|++++|...|.
T Consensus 1 L~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k------~~~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 1 LEAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAK------GARKITFEQFLEALA 68 (154)
T ss_dssp HHHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-S------S-SEEEHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcC------CCcccCHHHHHHHHH
Confidence 577899994 33 889999999999988732 247899999999997621 123499999998876
No 254
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=68.23 E-value=14 Score=38.47 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCCccceeecccccccc---cCCC-------CCCCCChHHHHHHHhCCCcEEEEEeeCCCCCCCceEEeCCccc------
Q 008582 112 TAPVSHYFIYTGHNSYL---TGNQ-------LNSDCSDVPIIRALQKGVRVIELDIWPNSKKDNVDVLHGGTMT------ 175 (561)
Q Consensus 112 ~~PLs~YfI~SSHNTYL---~g~Q-------l~g~Ss~e~Y~~aL~~GCRcvElD~Wdg~~~~~piv~HG~Tlt------ 175 (561)
+.||++-.|=-|||+.- .+.- -.+.+--.-...=|..|+|-+.|-+=-..+ ++-.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRyfDlRv~~~~~-~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNTQTQGLSIYDQLRAGARYFDIRPVITHG-GELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCccccccccccccCCCCHHHHHhcCCcEEEEEEEEcCC-CcEEEEecccccccccCc
Confidence 46999999999999852 2211 112222234566788999998888753222 356788876532
Q ss_pred ccchHHHHHHHHhhhccccCCCceEEEec
Q 008582 176 APVELIKCLRSIKEYAFVASEYPVVITLE 204 (561)
Q Consensus 176 s~i~f~dvi~aI~~~AF~~S~yPvIlSlE 204 (561)
+..+|.||++.|+++.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 25899999999999743332334777765
No 255
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length.
Probab=61.26 E-value=83 Score=33.45 Aligned_cols=99 Identities=11% Similarity=0.146 Sum_probs=68.5
Q ss_pred EEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeec-------CCceEE
Q 008582 434 LKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSV-------PELALL 506 (561)
Q Consensus 434 L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~-------pela~L 506 (561)
+.|.|+.|.+.+... .-...|+..+.| ...-|..+..+-.|.||..+-|.+.- .+-.-|
T Consensus 2 ivl~i~egr~F~~~~---------~~~~vv~a~~ng-----~~l~TDpv~~~~~p~f~teL~WE~Dr~~l~~~r~~~tPi 67 (340)
T PF12416_consen 2 IVLSILEGRNFPQRP---------RHPIVVEAKFNG-----ESLETDPVPHTESPQFNTELAWECDRKALKQHRLQRTPI 67 (340)
T ss_pred EEEEEecccCCCCCC---------CccEEEEEEeCC-----ceeeecCCCCCCCceeecceeeeccHHHHHHhhccCCce
Confidence 457788888775320 012244555544 45567777777889999999998642 223567
Q ss_pred EEEEEecC-CCCCCcceEEEEEeCccc---CCC-----ceEEEccCCCC
Q 008582 507 RIEVHEYD-MSEKDDFGGQTCLPVSEL---KQG-----IRAVPLHDRKG 546 (561)
Q Consensus 507 rf~V~D~d-~~~~dd~iGq~~lpL~~L---~~G-----yR~ipL~d~~G 546 (561)
++..|..| ..+..+.||...++|.+. ..| .+|-+|.+.++
T Consensus 68 Kl~c~a~~~~~~~re~iGyv~LdLRsa~~~~~~~~~~~~~W~~LL~~~~ 116 (340)
T PF12416_consen 68 KLQCFAVDGSTGKRESIGYVVLDLRSAVVPQEKNQKQKPKWYKLLSSSS 116 (340)
T ss_pred EEEEEEecCCCCcceeccEEEEEccccccccccccccCCCeeEcccccc
Confidence 88888877 456688999999999999 555 67889987733
No 256
>KOG4306 consensus Glycosylphosphatidylinositol-specific phospholipase C [Signal transduction mechanisms]
Probab=59.00 E-value=39 Score=35.17 Aligned_cols=83 Identities=25% Similarity=0.347 Sum_probs=54.7
Q ss_pred HHHHhCCCcEEEEEee---CCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEEeccC----CCHHHHHHH
Q 008582 143 IRALQKGVRVIELDIW---PNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDH----LTPDLQAKV 215 (561)
Q Consensus 143 ~~aL~~GCRcvElD~W---dg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~H----cs~~qQ~~m 215 (561)
..=|..|.|..-|=+= +++| .+--|+||-+.|. +..+|+.-|+++-= .++==||| ||.- -...--..+
T Consensus 73 ~~QL~~GvRylDlRi~~~~~~~D-~~~~i~HGl~~~~--~v~~vL~ev~~Fl~-~h~eEVVi-L~f~~~fg~~~~~h~~l 147 (306)
T KOG4306|consen 73 REQLVAGVRYLDLRIGYKLMDPD-REFYICHGLFSTY--PVLEVLNEVRQFLS-EHPEEVVI-LEFRHFFGMTEPHHRKL 147 (306)
T ss_pred HHHHhhcceEEEEEeeeccCCCC-cceEEEeeccccc--cHHHHHHHHHHHHH-hCCCEEEE-EeccchhccCccHHHHH
Confidence 4456789999777765 2232 2358999965554 45788888887532 22333333 5543 356667778
Q ss_pred HHHHHHHhhccccCC
Q 008582 216 AEMVTQTLGEILFTP 230 (561)
Q Consensus 216 a~~l~~i~Gd~L~~~ 230 (561)
...+++.||++|+.+
T Consensus 148 ~~~ik~~~g~~l~~d 162 (306)
T KOG4306|consen 148 VLVIKQGFGDILCDD 162 (306)
T ss_pred HHHHHHHhcccccCh
Confidence 888999999999943
No 257
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism]
Probab=58.55 E-value=12 Score=43.80 Aligned_cols=97 Identities=12% Similarity=0.172 Sum_probs=70.6
Q ss_pred CCceeEEEEeccCCCceeeecccCCCC-CCCccccEEEEeeecCCceEEEEEEEecCCCCCCcceEEEEEeCcccCCCc-
Q 008582 459 PDFYARVGIAGVPADTVMKKTKTLEDN-WIPSWNEEFEFPLSVPELALLRIEVHEYDMSEKDDFGGQTCLPVSELKQGI- 536 (561)
Q Consensus 459 ~DpyV~V~l~g~p~d~~k~kTkvi~nn-~nP~WNE~f~F~v~~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~~Gy- 536 (561)
.++|+.+.+... .-.+|..+.+. -+|.|.+.|..-.... ...+.|.|.+.+..+...++|.+.+|+..+..|-
T Consensus 138 ~e~Ylt~~l~~~----~~~~t~~~~~f~e~s~~~f~~~~~~~h~-~g~v~~~~~~~~~~G~s~~w~~v~~s~~~~~~~~~ 212 (887)
T KOG1329|consen 138 LENYLTVVLHKA----RYRRTHVIYEFLENSRWSFSFDIGFAHK-AGYVIFRVKGARVPGWSKRWGRVKISFLQYCSGHR 212 (887)
T ss_pred ccchheeeechh----hhhchhhhhcccccchhhhhcccccccc-ccEEEEeecCCccccceeEEEEeccchhhhhcccc
Confidence 478999988752 34577777777 5899999886665544 3578999998876665778899999988888774
Q ss_pred --eEEEccCCCCCcccC-eEEEEEEEE
Q 008582 537 --RAVPLHDRKGERYKS-VKLLMHFEF 560 (561)
Q Consensus 537 --R~ipL~d~~G~~~~~-atLlv~~~f 560 (561)
.+.++.+..+++..+ +++.+++.|
T Consensus 213 ~~~~~~Il~~d~~~~~~~~~~~~~~~~ 239 (887)
T KOG1329|consen 213 IGGWFPILDNDGKPHQKGSNESLRLGF 239 (887)
T ss_pred ccceeeeeccCCccccCCcccceEEee
Confidence 356777777777654 455555555
No 258
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=53.66 E-value=15 Score=24.23 Aligned_cols=26 Identities=12% Similarity=0.524 Sum_probs=22.1
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~ 51 (561)
||+.+|+.|=.+ +.++.++|...|+.
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 688999999644 89999999999864
No 259
>PTZ00183 centrin; Provisional
Probab=53.65 E-value=48 Score=29.86 Aligned_cols=62 Identities=16% Similarity=0.352 Sum_probs=44.3
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++..+|..+-.+ +.++.++|..+|+... . ..+.+.+..++..+.. -+.+.+++.+|...+.
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g-~-~~~~~~~~~l~~~~d~------~~~g~i~~~eF~~~~~ 80 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLG-F-EPKKEEIKQMIADVDK------DGSGKIDFEEFLDIMT 80 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhC-C-CCCHHHHHHHHHHhCC------CCCCcEeHHHHHHHHH
Confidence 4566668776543 8899999999998653 3 2466777888777642 1245699999998775
No 260
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=53.51 E-value=37 Score=35.02 Aligned_cols=79 Identities=20% Similarity=0.280 Sum_probs=51.9
Q ss_pred CCCCCCCCChHHHHHHHhC----C-CcEEEEEeeCCCCCCCceEEe-CCccc-ccchHHHHHHHHhhhccccCCCceEEE
Q 008582 130 GNQLNSDCSDVPIIRALQK----G-VRVIELDIWPNSKKDNVDVLH-GGTMT-APVELIKCLRSIKEYAFVASEYPVVIT 202 (561)
Q Consensus 130 g~Ql~g~Ss~e~Y~~aL~~----G-CRcvElD~Wdg~~~~~piv~H-G~Tlt-s~i~f~dvi~aI~~~AF~~S~yPvIlS 202 (561)
+=|+.| ++.+.|.++..+ | +..|||.+.- |..-| |..+- ..=...+++++|++.. ++||++-
T Consensus 95 i~si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~c------P~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vK 163 (301)
T PRK07259 95 IANVAG-STEEEYAEVAEKLSKAPNVDAIELNISC------PNVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVK 163 (301)
T ss_pred EEEecc-CCHHHHHHHHHHHhccCCcCEEEEECCC------CCCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEE
Confidence 345655 468888887754 8 9999999863 22235 32222 2335689999999864 7999988
Q ss_pred eccCCCHHHHHHHHHHHHH
Q 008582 203 LEDHLTPDLQAKVAEMVTQ 221 (561)
Q Consensus 203 lE~Hcs~~qQ~~ma~~l~~ 221 (561)
|-. +.+.-..+|+.+.+
T Consensus 164 l~~--~~~~~~~~a~~l~~ 180 (301)
T PRK07259 164 LTP--NVTDIVEIAKAAEE 180 (301)
T ss_pred cCC--CchhHHHHHHHHHH
Confidence 763 33445566776655
No 261
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=50.88 E-value=16 Score=24.06 Aligned_cols=26 Identities=15% Similarity=0.473 Sum_probs=21.2
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~ 51 (561)
++..+|..|=.+ ..|+.++|+.+|+.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~ 28 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRK 28 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 578899999644 89999999999973
No 262
>PTZ00184 calmodulin; Provisional
Probab=49.23 E-value=66 Score=28.41 Aligned_cols=63 Identities=14% Similarity=0.337 Sum_probs=44.4
Q ss_pred hHHHHHHHHhhC-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 25 DAVKSMFDQYSE-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 25 ~ei~~if~~~~~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
+++...|..+-. + +.++.++|..+|... +.. .+.+.+..++..+.. ...+.++++.|..+|..
T Consensus 11 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~~-~~~~~~~~~~~~~d~------~~~g~i~~~ef~~~l~~ 75 (149)
T PTZ00184 11 AEFKEAFSLFDKDGDGTITTKELGTVMRSL-GQN-PTEAELQDMINEVDA------DGNGTIDFPEFLTLMAR 75 (149)
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHh-CCC-CCHHHHHHHHHhcCc------CCCCcCcHHHHHHHHHH
Confidence 456667777643 3 889999999999754 332 456778888877652 12356999999998773
No 263
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=44.84 E-value=89 Score=31.85 Aligned_cols=90 Identities=14% Similarity=0.210 Sum_probs=58.0
Q ss_pred cCCCCCCCCChHHHHHHH----hCCCcEEEEEeeCCCCCCCceEEeCCc-ccccchHHHHHHHHhhhccccCCCceEEEe
Q 008582 129 TGNQLNSDCSDVPIIRAL----QKGVRVIELDIWPNSKKDNVDVLHGGT-MTAPVELIKCLRSIKEYAFVASEYPVVITL 203 (561)
Q Consensus 129 ~g~Ql~g~Ss~e~Y~~aL----~~GCRcvElD~Wdg~~~~~piv~HG~T-lts~i~f~dvi~aI~~~AF~~S~yPvIlSl 203 (561)
++=|+.|. +.+.|.++. ..|+..|||++-. + ..-.|.. +...=...+++++|++.. +.||++-|
T Consensus 101 vi~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~c-P-----~~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl 169 (289)
T cd02810 101 LIASVGGS-SKEDYVELARKIERAGAKALELNLSC-P-----NVGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKL 169 (289)
T ss_pred EEEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcCC-C-----CCCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEe
Confidence 44566653 555554443 4599999999864 1 1112333 223345678999999754 79999999
Q ss_pred ccCCCHHHHHHHHHHHHHHhhccccC
Q 008582 204 EDHLTPDLQAKVAEMVTQTLGEILFT 229 (561)
Q Consensus 204 E~Hcs~~qQ~~ma~~l~~i~Gd~L~~ 229 (561)
-..-+.+.=..+|+.+.+.=-|.|.+
T Consensus 170 ~~~~~~~~~~~~a~~l~~~Gad~i~~ 195 (289)
T cd02810 170 SPYFDLEDIVELAKAAERAGADGLTA 195 (289)
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 88777777777788776642255544
No 264
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=44.48 E-value=75 Score=29.10 Aligned_cols=64 Identities=22% Similarity=0.443 Sum_probs=48.9
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcC
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFG 95 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s 95 (561)
..||...|.-|-.+ +++|+++|+.+|...= + ..+.+.+..+|..... -..+.+++++|...|..
T Consensus 84 ~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg-~-~~~~~e~~~mi~~~d~------d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 84 SEELKEAFRVFDKDGDGFISASELKKVLTSLG-E-KLTDEECKEMIREVDV------DGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHHHccCCCCcCcHHHHHHHHHHhC-C-cCCHHHHHHHHHhcCC------CCCCeEeHHHHHHHHhc
Confidence 45899999998644 8999999999999753 4 3678889988887541 12356789999987763
No 265
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=44.35 E-value=33 Score=32.78 Aligned_cols=99 Identities=18% Similarity=0.283 Sum_probs=62.6
Q ss_pred chHHHHHHHHhhCC---CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc--CCCC
Q 008582 24 PDAVKSMFDQYSEN---GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF--GDIN 98 (561)
Q Consensus 24 r~ei~~if~~~~~~---~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~--s~~n 98 (561)
|.++..+|.++.+. ..++++.|..-+.+.=+....+.+.+..+|...-.. .....+|+.+|..||. ..++
T Consensus 18 k~~vi~~W~eiv~~~~i~av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~-----k~~~~iT~~Df~~F~A~FGP~~ 92 (181)
T PF11422_consen 18 KRNVISIWEEIVQNHGIFAVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTP-----KNTNVITIPDFYKFLARFGPEE 92 (181)
T ss_dssp HHHHHHHHHHHHSSSS--EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS-------SS-SEEEHHHHHHHHHHSSSGG
T ss_pred HHHHHHHHHHHhcCCCcceeeHHHHHHHHHHHhccccccccchHHHHHHHHcC-----CCCceeeHHHHHHHHHHhCCch
Confidence 56788899999876 378888887766544322335778888888865311 1235789999999987 4333
Q ss_pred CCC-C------------C---C-CCccCCCCCCccceeeccccccc
Q 008582 99 PPL-S------------P---T-PVVHHDMTAPVSHYFIYTGHNSY 127 (561)
Q Consensus 99 ~~~-~------------~---~-~~~~~dm~~PLs~YfI~SSHNTY 127 (561)
.++ + + + ....+-|+++|+-||=+.=||=.
T Consensus 93 tim~KI~~lL~~s~~~~~wl~~~Pd~~~~~~~~i~g~f~~t~~NC~ 138 (181)
T PF11422_consen 93 TIMEKIHSLLCSSNNDGQWLYFDPDAEKNFDNSISGYFDNTEPNCF 138 (181)
T ss_dssp GHHHHHHHHHHHHHTTTS-B-SSSSTTTTTCCS-EEEEESSSTTEE
T ss_pred hHHHHHHHHHHhhccCCcceeeCchhhcccCcccceeeccCCCceE
Confidence 221 0 0 1 12556788899999988877744
No 266
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain
Probab=42.85 E-value=69 Score=30.31 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=47.1
Q ss_pred CceeEEEEeccCCCceeeecccC--CCCCCCccccEEEEeee-cCCceEEEEEEEecCCCCCCcceEEEEEeCcccC
Q 008582 460 DFYARVGIAGVPADTVMKKTKTL--EDNWIPSWNEEFEFPLS-VPELALLRIEVHEYDMSEKDDFGGQTCLPVSELK 533 (561)
Q Consensus 460 DpyV~V~l~g~p~d~~k~kTkvi--~nn~nP~WNE~f~F~v~-~pela~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~ 533 (561)
..|++|.+.+ +..-+|+.. ..+|.=.+||.|.+++. .|+ .|.+.||.... ..+..|+++.+||-...
T Consensus 38 ~~~ikl~~N~----k~V~~T~~~~l~~dF~v~f~~~f~v~i~~~Pe--si~l~i~E~~~-~~~~~la~v~vpvP~~~ 107 (168)
T PF15625_consen 38 RYYIKLFFND----KEVSRTRSRPLWSDFRVHFNEIFNVQITRWPE--SIKLEIYEKSG-LSDRLLAEVFVPVPGST 107 (168)
T ss_pred eEEEEEEECC----EEEEeeeeEecCCCeEEeccCEEEEEEecCCC--EEEEEEEEccC-ccceEEEEEEeeCCCCc
Confidence 3488888764 233355543 33466778999999885 454 48899998775 56889999999976543
No 267
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=42.43 E-value=87 Score=29.63 Aligned_cols=60 Identities=12% Similarity=0.336 Sum_probs=45.0
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
++++.|..+..+ +.|+..+|...|+.-+.. .+.+.+..|++.+- . +...|++..|+..|-
T Consensus 21 ~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~--~s~~ei~~l~~~~d------~-~~~~idf~~Fl~~ms 82 (160)
T COG5126 21 ELKEAFQLFDRDSDGLIDRNELGKILRSLGFN--PSEAEINKLFEEID------A-GNETVDFPEFLTVMS 82 (160)
T ss_pred HHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCC--CcHHHHHHHHHhcc------C-CCCccCHHHHHHHHH
Confidence 445556665543 899999999999966553 58888888888754 1 346799999999877
No 268
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=41.80 E-value=34 Score=20.32 Aligned_cols=26 Identities=15% Similarity=0.478 Sum_probs=20.3
Q ss_pred HHHHHHHHhhCC--CCcCHHHHHHHHHH
Q 008582 26 AVKSMFDQYSEN--GTMTVDHLHRFLIE 51 (561)
Q Consensus 26 ei~~if~~~~~~--~~l~~~~~~~Fl~~ 51 (561)
|+..+|..+-.+ +.++.++|..++..
T Consensus 1 ~~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 1 ELKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred CHHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 467788887544 78999999998864
No 269
>KOG0906 consensus Phosphatidylinositol 3-kinase VPS34, involved in signal transduction [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.93 E-value=28 Score=39.64 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=55.7
Q ss_pred CCCceeEEEEeccCCCce-eeecccCCCCCCCccccEEEEeeecCCc---eEEEEEEEecCCCCCCcceEEEEEeCc---
Q 008582 458 PPDFYARVGIAGVPADTV-MKKTKTLEDNWIPSWNEEFEFPLSVPEL---ALLRIEVHEYDMSEKDDFGGQTCLPVS--- 530 (561)
Q Consensus 458 ~~DpyV~V~l~g~p~d~~-k~kTkvi~nn~nP~WNE~f~F~v~~pel---a~Lrf~V~D~d~~~~dd~iGq~~lpL~--- 530 (561)
.+|.||+..+...+.... --+|+.+.-.-.-.|||=+++.+..+++ |.+.+.+||........|+|..++.+-
T Consensus 46 ~~~l~~~c~v~~~~~~~~lP~~ts~~~~~~~~~wnewLtlpvky~dLt~~a~l~itiW~~n~~~~~~~vg~~t~~lf~k~ 125 (843)
T KOG0906|consen 46 SSDLYVTCQVFAEGKPFALPVRTSYKAFSKRINWNEWLTLPVKYSDLTRNAQLAITIWDVNGPKKAVFVGGTTVSLFGKY 125 (843)
T ss_pred chhhhheeeeeccCCcccCCccccccccCCccchhhhhccccccccccccceEEEEEEecCCCceeeeccceEEEeeccc
Confidence 457788776653221111 1123322111111399999999887776 789999999876667789999888764
Q ss_pred -ccCCCceEEEcc
Q 008582 531 -ELKQGIRAVPLH 542 (561)
Q Consensus 531 -~L~~GyR~ipL~ 542 (561)
-|++|..-++|.
T Consensus 126 ~~lk~G~~~l~~~ 138 (843)
T KOG0906|consen 126 GMLKQGMQDLKLW 138 (843)
T ss_pred chHhhhhhhcccc
Confidence 378898877775
No 270
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=39.86 E-value=99 Score=28.30 Aligned_cols=65 Identities=15% Similarity=0.299 Sum_probs=51.5
Q ss_pred hHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhcCCC
Q 008582 25 DAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLFGDI 97 (561)
Q Consensus 25 ~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~s~~ 97 (561)
.++..+|..+-.+ +.++..+|...|+.--.. .+.+....+++++.. .+.+.++++.|...|....
T Consensus 8 ~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~--~t~~el~~~~~~~D~------dg~g~I~~~eF~~l~~~~~ 74 (151)
T KOG0027|consen 8 LELKEAFQLFDKDGDGKISVEELGAVLRSLGQN--PTEEELRDLIKEIDL------DGDGTIDFEEFLDLMEKLG 74 (151)
T ss_pred HHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCC--CCHHHHHHHHHHhCC------CCCCeEcHHHHHHHHHhhh
Confidence 5788889988543 899999999999977654 588899999998762 1346799999999888543
No 271
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=39.66 E-value=78 Score=29.94 Aligned_cols=65 Identities=18% Similarity=0.416 Sum_probs=51.1
Q ss_pred CCchHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 22 EAPDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 22 ~~r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
.++.||..-|+-|=.+ ++++..+|+.-|... ++ ..+.+++..+|..+... ..+.++++.|...+.
T Consensus 89 ~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l-ge-~~~deev~~ll~~~d~d------~dG~i~~~eF~~~~~ 155 (160)
T COG5126 89 DKEEELREAFKLFDKDHDGYISIGELRRVLKSL-GE-RLSDEEVEKLLKEYDED------GDGEIDYEEFKKLIK 155 (160)
T ss_pred CcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh-cc-cCCHHHHHHHHHhcCCC------CCceEeHHHHHHHHh
Confidence 4678999999998644 899999999999843 44 46888999999887621 246799999998776
No 272
>PRK09071 hypothetical protein; Validated
Probab=39.33 E-value=22 Score=37.53 Aligned_cols=56 Identities=18% Similarity=0.305 Sum_probs=36.3
Q ss_pred CCCCCC--hHHHHHHHhCCCcEE----EEE--eeCCCCC---------------CCceEEeCC-cccccc-hHHHHHHHH
Q 008582 133 LNSDCS--DVPIIRALQKGVRVI----ELD--IWPNSKK---------------DNVDVLHGG-TMTAPV-ELIKCLRSI 187 (561)
Q Consensus 133 l~g~Ss--~e~Y~~aL~~GCRcv----ElD--~Wdg~~~---------------~~piv~HG~-Tlts~i-~f~dvi~aI 187 (561)
++|++. +.++.+||+.-|.-+ .|| |++|.++ +-||+.||. ..|++. .-.||++++
T Consensus 52 ~kgeT~eEi~g~~~a~r~~~~~~~~~~~iD~~~gtG~d~~~~~~~~~a~vlA~~G~~V~kHGnr~~ssk~g~saDvLeaL 131 (323)
T PRK09071 52 VKEETAEELAGFVEAIRERLQAPPLAVDLDWPSYAGKRRHLPWYLLAAKLLAQNGYRVLLHGGGGHTAGRLYTEQLLEAL 131 (323)
T ss_pred HcCCCHHHHHHHHHHHHHhcccCCCCCceecCCcCCCCCCcccHHHHHHHHHHCCCeEEEECCCCCCCCcccHHHHHHHC
Confidence 344443 346888888655433 366 6888763 458999997 456564 378888876
Q ss_pred h
Q 008582 188 K 188 (561)
Q Consensus 188 ~ 188 (561)
.
T Consensus 132 G 132 (323)
T PRK09071 132 G 132 (323)
T ss_pred C
Confidence 3
No 273
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=34.97 E-value=71 Score=24.30 Aligned_cols=46 Identities=20% Similarity=0.276 Sum_probs=31.9
Q ss_pred cCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 40 MTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 40 l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
|+-.++++||+...=+ ++.+.|..|+++... .+.+.|..+.|..|.
T Consensus 2 msf~Evk~lLk~~NI~--~~~~yA~~LFq~~D~------s~~g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMNIE--MDDEYARQLFQECDK------SQSGRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-S------SSSSEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHccC--cCHHHHHHHHHHhcc------cCCCCccHHHHHHHH
Confidence 7788999999966543 688999999988652 134568888888774
No 274
>PTZ00466 actin-like protein; Provisional
Probab=34.16 E-value=49 Score=35.52 Aligned_cols=45 Identities=20% Similarity=0.197 Sum_probs=38.7
Q ss_pred HHHHHHHhhhccc-----cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 008582 181 IKCLRSIKEYAFV-----ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (561)
Q Consensus 181 ~dvi~aI~~~AF~-----~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (561)
.|..+.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||-
T Consensus 86 wd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~ 135 (380)
T PTZ00466 86 WNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNV 135 (380)
T ss_pred HHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCC
Confidence 6778888888873 36899999987888999999999999999985
No 275
>PTZ00452 actin; Provisional
Probab=34.12 E-value=49 Score=35.46 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=40.3
Q ss_pred HHHHHHHHhhhccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc-cccC
Q 008582 180 LIKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE-ILFT 229 (561)
Q Consensus 180 f~dvi~aI~~~AF~------~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd-~L~~ 229 (561)
=.|.++.|=+|+|. .+++||+++=-..++..++++||++|=|.|+- .++.
T Consensus 78 dwd~~e~iw~~~f~~~l~v~p~~~pvlitE~~~~~~~~Re~l~eilFE~~~vp~~~~ 134 (375)
T PTZ00452 78 SWDDIEIIWHHAFYNELCMSPEDQPVFMTDAPMNSKFNRERMTQIMFETFNTPCLYI 134 (375)
T ss_pred CHHHHHHHHHHHHHhhcCCCcccCceeeecCCCCCHHHHHHHHHHHhhccCCceEEE
Confidence 36778888888874 25899999966777899999999999999986 3443
No 276
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=33.68 E-value=27 Score=28.27 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=26.9
Q ss_pred CCCchHHHHHHHHhhCC-CCcCHHHHHHHHHHHc
Q 008582 21 SEAPDAVKSMFDQYSEN-GTMTVDHLHRFLIEVQ 53 (561)
Q Consensus 21 ~~~r~ei~~if~~~~~~-~~l~~~~~~~Fl~~~Q 53 (561)
..+..+|.+-|+.++++ +++|.++|++-|.-+|
T Consensus 2 ~~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~ 35 (69)
T PF08726_consen 2 QDSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQ 35 (69)
T ss_dssp SSTCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCC
T ss_pred CCCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHH
Confidence 35678899999999988 9999999999876444
No 277
>PLN02591 tryptophan synthase
Probab=33.40 E-value=32 Score=34.91 Aligned_cols=86 Identities=22% Similarity=0.256 Sum_probs=51.5
Q ss_pred HHHHH-hCCCcEEEEEee-CCCCCCCceEEeC--CcccccchHHHHHHHHhhhccccCCCceEEEeccCCCHHHHH---H
Q 008582 142 IIRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYPVVITLEDHLTPDLQA---K 214 (561)
Q Consensus 142 Y~~aL-~~GCRcvElD~W-dg~~~~~piv~HG--~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlSlE~Hcs~~qQ~---~ 214 (561)
++++| ..||-.|||.+= ..|--+.|+|-.- ..|...++++++++.+++.. ...+-|+||. -..++=.|. +
T Consensus 21 ~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~ilm--~Y~N~i~~~G~~~ 97 (250)
T PLN02591 21 ALRLLDACGADVIELGVPYSDPLADGPVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVLF--TYYNPILKRGIDK 97 (250)
T ss_pred HHHHHHHCCCCEEEECCCCCCCcccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEEE--ecccHHHHhHHHH
Confidence 44444 579999999873 1122344777644 45777889999999999977 4467796633 233433343 3
Q ss_pred HHHHHHHHhhccccCC
Q 008582 215 VAEMVTQTLGEILFTP 230 (561)
Q Consensus 215 ma~~l~~i~Gd~L~~~ 230 (561)
..+-+++.=-|-|++|
T Consensus 98 F~~~~~~aGv~Gviip 113 (250)
T PLN02591 98 FMATIKEAGVHGLVVP 113 (250)
T ss_pred HHHHHHHcCCCEEEeC
Confidence 3344444333445555
No 278
>KOG1761 consensus Signal recognition particle, subunit Srp14 [Intracellular trafficking, secretion, and vesicular transport]
Probab=31.81 E-value=62 Score=28.71 Aligned_cols=45 Identities=20% Similarity=0.135 Sum_probs=31.3
Q ss_pred HHHHHHHhCC--CcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhccccCCCceEEE
Q 008582 140 VPIIRALQKG--VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAFVASEYPVVIT 202 (561)
Q Consensus 140 e~Y~~aL~~G--CRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF~~S~yPvIlS 202 (561)
+.|..+=..| |+-|+++++||-+ .|+--- +..-.|.-++|+.+|-
T Consensus 14 ~~~q~~k~~g~~sv~it~k~~dgrt--k~~p~k----------------gs~~g~e~~e~~cLiR 60 (116)
T KOG1761|consen 14 RLFQKSKIKGASSVYITLKRYDGRT--KPVPKK----------------GSVEGFEPSEYRCLIR 60 (116)
T ss_pred HHHHhhhhcCCcceEEEEeccCCCc--cccccc----------------CCcCCCCCccceEEEE
Confidence 3567777788 9999999999854 232211 2234788999999863
No 279
>PTZ00281 actin; Provisional
Probab=31.16 E-value=55 Score=35.02 Aligned_cols=46 Identities=17% Similarity=0.192 Sum_probs=38.7
Q ss_pred HHHHHHHhhhccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhcc
Q 008582 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (561)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~ 226 (561)
.|..+.|=+|+|. .+++||+|+--.+++..++++|+++|=|.||--
T Consensus 80 wd~~e~l~~~~f~~~l~v~p~~~pvllte~~~~~~~~re~l~e~lFE~~~vp 131 (376)
T PTZ00281 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131 (376)
T ss_pred HHHHHHHHHHHHHhhccCCCccCeEEEecCCCCcHHHHHHHHHHHhcccCCc
Confidence 6778888888884 357999999777789999999999999999853
No 280
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=29.75 E-value=85 Score=31.14 Aligned_cols=39 Identities=15% Similarity=0.160 Sum_probs=32.7
Q ss_pred CcEEEEEeeCCCCCCCceEEeCCcccccchHHHHHHHHhhhcc
Q 008582 150 VRVIELDIWPNSKKDNVDVLHGGTMTAPVELIKCLRSIKEYAF 192 (561)
Q Consensus 150 CRcvElD~Wdg~~~~~piv~HG~Tlts~i~f~dvi~aI~~~AF 192 (561)
+=+|-||+.+| -.++++||.-.+.+...+.++...+..+
T Consensus 123 ~ivvslD~~~g----~~v~~~gw~~~~~~~~~~~~~~~~~~g~ 161 (229)
T PF00977_consen 123 RIVVSLDARDG----YKVATNGWQESSGIDLEEFAKRLEELGA 161 (229)
T ss_dssp GEEEEEEEEET----EEEEETTTTEEEEEEHHHHHHHHHHTT-
T ss_pred cEEEEEEeeec----eEEEecCccccCCcCHHHHHHHHHhcCC
Confidence 44666999995 2589999999999999999999998875
No 281
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=29.26 E-value=2.1e+02 Score=25.42 Aligned_cols=59 Identities=17% Similarity=0.271 Sum_probs=41.8
Q ss_pred chHHHHHHHHhhCC--CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhhc
Q 008582 24 PDAVKSMFDQYSEN--GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYLF 94 (561)
Q Consensus 24 r~ei~~if~~~~~~--~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L~ 94 (561)
..+|...|..+=.+ +.|+.++|..++ . . .....+..+|+.+.. .+.+.||++.|...|.
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~---l-~--~~e~~~~~f~~~~D~------n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR---L-D--PNEHCIKPFFESCDL------DKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH---c-c--chHHHHHHHHHHHCC------CCCCCCCHHHHHHHHh
Confidence 45678889988544 899999999987 2 1 123445667776641 1346899999999985
No 282
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms]
Probab=29.11 E-value=2.1e+02 Score=30.11 Aligned_cols=77 Identities=17% Similarity=0.162 Sum_probs=47.6
Q ss_pred CCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCCCceeeecccCCCCCCCccccEEEEeeecCCceEEEEE
Q 008582 430 AKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPADTVMKKTKTLEDNWIPSWNEEFEFPLSVPELALLRIE 509 (561)
Q Consensus 430 ~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~d~~k~kTkvi~nn~nP~WNE~f~F~v~~pela~Lrf~ 509 (561)
..+.|-++++.|.||..... ...-..+.|+.++.. ...+.||.+.....-=.|.|+|+.++...+ .+.+.
T Consensus 49 ~tGiL~~H~~~GRGLr~~p~----~kglt~~~ycVle~d----rqh~aRt~vrs~~~~f~w~e~F~~Dvv~~~--vl~~l 118 (442)
T KOG1452|consen 49 STGILYFHAYNGRGLRMTPQ----QKGLTVCFYCVLEPD----RQHPARTRVRSSGPGFAWAEDFKHDVVNIE--VLHYL 118 (442)
T ss_pred ccceEEEEEecccccccChh----ccCceeeeeeeeeec----ccCccccccccCCCCccchhhceeecccce--eeeEE
Confidence 34678899999999864321 112234667665543 234445655444444469999998876543 46788
Q ss_pred EEecCCC
Q 008582 510 VHEYDMS 516 (561)
Q Consensus 510 V~D~d~~ 516 (561)
||.++..
T Consensus 119 vySW~pq 125 (442)
T KOG1452|consen 119 VYSWPPQ 125 (442)
T ss_pred EeecCch
Confidence 8887643
No 283
>PF00022 Actin: Actin; InterPro: IPR004000 Actin [, ] is a ubiquitous protein involved in the formation of filaments that are major components of the cytoskeleton. These filaments interact with myosin to produce a sliding effect, which is the basis of muscular contraction and many aspects of cell motility, including cytokinesis. Each actin protomer binds one molecule of ATP and has one high affinity site for either calcium or magnesium ions, as well as several low affinity sites. Actin exists as a monomer in low salt concentrations, but filaments form rapidly as salt concentration rises, with the consequent hydrolysis of ATP. Actin from many sources forms a tight complex with deoxyribonuclease (DNase I) although the significance of this is still unknown. The formation of this complex results in the inhibition of DNase I activity, and actin loses its ability to polymerise. It has been shown that an ATPase domain of actin shares similarity with ATPase domains of hexokinase and hsp70 proteins [, ]. In vertebrates there are three groups of actin isoforms: alpha, beta and gamma. The alpha actins are found in muscle tissues and are a major constituent of the contractile apparatus. The beta and gamma actins co-exists in most cell types as components of the cytoskeleton and as mediators of internal cell motility. In plants there are many isoforms which are probably involved in a variety of functions such as cytoplasmic streaming, cell shape determination, tip growth, graviperception, cell wall deposition, etc. Recently some divergent actin-like proteins have been identified in several species. These proteins include centractin (actin-RPV) from mammals, fungi yeast ACT5, Neurospora crassa ro-4) and Pneumocystis carinii, which seems to be a component of a multi-subunit centrosomal complex involved in microtubule based vesicle motility (this subfamily is known as ARP1); ARP2 subfamily, which includes chicken ACTL, Saccharomyces cerevisiae ACT2, Drosophila melanogaster 14D and Caenorhabditis elegans actC; ARP3 subfamily, which includes actin 2 from mammals, Drosophila 66B, yeast ACT4 and Schizosaccharomyces pombe act2; and ARP4 subfamily, which includes yeast ACT3 and Drosophila 13E.; PDB: 2OAN_B 1HLU_A 2BTF_A 3UB5_A 3U4L_A 4EFH_A 1YVN_A 1YAG_A 1D4X_A 1MDU_B ....
Probab=28.29 E-value=66 Score=34.21 Aligned_cols=45 Identities=27% Similarity=0.410 Sum_probs=35.3
Q ss_pred HHHHHHHhhhccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 008582 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (561)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (561)
.|.++.|=+|+|. .+++||||+.-.+++..++++|+++|-+.||-
T Consensus 73 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~~~~~~~~~r~~l~e~lfE~~~~ 123 (393)
T PF00022_consen 73 WDALEEIWDYIFSNLLKVDPSDHPVLLTEPPFNPRSQREKLAEILFEKFGV 123 (393)
T ss_dssp HHHHHHHHHHHHHTTT-SSGGGSEEEEEESTT--HHHHHHHHHHHHHTS--
T ss_pred ccccccccccccccccccccccceeeeeccccCCchhhhhhhhhhhccccc
Confidence 4667777777775 57899999999999999999999999999985
No 284
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function. It may be the C2 domain from KIAA1005 however this cannot be confirmed. ; PDB: 2YRB_A.
Probab=27.65 E-value=1.8e+02 Score=25.44 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=42.6
Q ss_pred ecccCCCCCCCccccEEEEeeecCCc-------eEEEEEEEecCCCCCCcceEEEEEeCcccC--CC---ceEEEccCCC
Q 008582 478 KTKTLEDNWIPSWNEEFEFPLSVPEL-------ALLRIEVHEYDMSEKDDFGGQTCLPVSELK--QG---IRAVPLHDRK 545 (561)
Q Consensus 478 kTkvi~nn~nP~WNE~f~F~v~~pel-------a~Lrf~V~D~d~~~~dd~iGq~~lpL~~L~--~G---yR~ipL~d~~ 545 (561)
.|.++. +.+|.+|-+-.|.|...++ ..+++.++..- ...-..+|.+.+++..+- .| +-.+.|.+.+
T Consensus 14 ~Tpvv~-G~~p~y~fts~y~V~~d~~fl~YLq~~~~~lELhqa~-g~d~~tla~~~i~l~~ll~~~~~~i~~~~~l~g~~ 91 (107)
T PF11618_consen 14 TTPVVR-GLNPFYDFTSQYKVTMDDLFLHYLQTGSLTLELHQAL-GSDFETLAAGQISLRPLLESNGERIHGSATLVGVS 91 (107)
T ss_dssp E---EE-SSS----EEEEEEE--SHHHHHHHHH--EEEEEEEE--SS-EEEEEEEEE--SHHHH--S--EEEEEEE-BSS
T ss_pred ccccee-CCCccceeEEEEEEEcCHHHHHHhhcCCEEEEEEeec-cCCeEEEEEEEeechhhhcCCCceEEEEEEEeccC
Confidence 455554 7899999999998875443 56888888754 233579999999999874 33 4467888998
Q ss_pred CCcccCeEEEEEEE
Q 008582 546 GERYKSVKLLMHFE 559 (561)
Q Consensus 546 G~~~~~atLlv~~~ 559 (561)
|+. .++|-..+.
T Consensus 92 ~~~--~g~l~y~~r 103 (107)
T PF11618_consen 92 GED--FGTLEYWIR 103 (107)
T ss_dssp S-T--SEEEEEEEE
T ss_pred CCe--EEEEEEEEE
Confidence 883 445655443
No 285
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=27.30 E-value=46 Score=25.58 Aligned_cols=29 Identities=21% Similarity=0.168 Sum_probs=21.4
Q ss_pred ccccccccCCCCCCCCChHHHHHHHhCCCcEEE
Q 008582 122 TGHNSYLTGNQLNSDCSDVPIIRALQKGVRVIE 154 (561)
Q Consensus 122 SSHNTYL~g~Ql~g~Ss~e~Y~~aL~~GCRcvE 154 (561)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 448899988 44556899999999998874
No 286
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=25.90 E-value=1.8e+02 Score=29.41 Aligned_cols=53 Identities=17% Similarity=0.162 Sum_probs=41.4
Q ss_pred CCChHHHHHHHhCCCcEEEEEeeCC-----CCCCCceEEeCCcccccchHHHHHHHHh
Q 008582 136 DCSDVPIIRALQKGVRVIELDIWPN-----SKKDNVDVLHGGTMTAPVELIKCLRSIK 188 (561)
Q Consensus 136 ~Ss~e~Y~~aL~~GCRcvElD~Wdg-----~~~~~piv~HG~Tlts~i~f~dvi~aI~ 188 (561)
--|-..-..||....-+||.|+==| ...+.||+.|=...+|.++|++.+.+|.
T Consensus 11 vNsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~~SdltLee~L~~v~ 68 (244)
T PF10223_consen 11 VNSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPATDSDLTLEEWLDEVL 68 (244)
T ss_pred cCCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCCCCcCcHHHHHHHHh
Confidence 3456667788888888999999422 3345699999666789999999999998
No 287
>PF14186 Aida_C2: Cytoskeletal adhesion; PDB: 2QZQ_A 2QZ5_A.
Probab=25.79 E-value=3.6e+02 Score=25.17 Aligned_cols=105 Identities=19% Similarity=0.143 Sum_probs=53.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCCccCCCCCCCceeEEEEeccCC-Cc-eeeecccCCCC-CC-CccccEEEEeee---cC
Q 008582 429 PAKKTLKVTVYMGEGWYYDFPHTHFDAYSPPDFYARVGIAGVPA-DT-VMKKTKTLEDN-WI-PSWNEEFEFPLS---VP 501 (561)
Q Consensus 429 p~~~~L~V~Visaq~L~~~~~~~~~~~~~~~DpyV~V~l~g~p~-d~-~k~kTkvi~nn-~n-P~WNE~f~F~v~---~p 501 (561)
|....|+|+|-... +. +...-.|||+.|++..... +- ..+.|-+.... .| =.||.+.+.+.. .|
T Consensus 10 ~g~t~l~v~Iekig-lk--------da~~~~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp 80 (147)
T PF14186_consen 10 PGMTYLSVFIEKIG-LK--------DASQYIDPYFTVSVKDGNGKDVEPPQDTPVGSRREDNYVHFNNTVHLQTPLEKLP 80 (147)
T ss_dssp TT--EEEEEEEEEE--T--------TGGG-EEEEEEEEEE-TTS-BSS--EE--S-SEEETTEEEEEEEEE-SS-GGGS-
T ss_pred CCCceEEEEEEEEE-EC--------ChHHccCCeEEEEEECCCCCCccccccCCCcccccCCEEEEcccEEEcCCHHHCC
Confidence 33456777776543 31 2233468999999874322 21 13345544211 22 345666665543 45
Q ss_pred CceEEEEEEEecCCC-CCCcceEEEEEeCcccCCCceEEEcc
Q 008582 502 ELALLRIEVHEYDMS-EKDDFGGQTCLPVSELKQGIRAVPLH 542 (561)
Q Consensus 502 ela~Lrf~V~D~d~~-~~dd~iGq~~lpL~~L~~GyR~ipL~ 542 (561)
+.+.|-|.++++-.. .+-...+++.++++.+++|--.+.|+
T Consensus 81 ~Gaai~fE~kH~K~kk~k~S~kcw~fme~dei~~g~~~lely 122 (147)
T PF14186_consen 81 KGAAIFFEFKHYKPKKKKTSTKCWAFMELDEIKPGPVVLELY 122 (147)
T ss_dssp TT-EEEEEEEEEETTTTCEEEEEEEEEEGGG--SEEEEE--E
T ss_pred CceEEEEEEEeeeccceeeeeeEEEEEEhhhccCCceeeehh
Confidence 667788999986532 23457899999999999995455554
No 288
>smart00268 ACTIN Actin. ACTIN subfamily of ACTIN/mreB/sugarkinase/Hsp70 superfamily
Probab=25.56 E-value=73 Score=33.71 Aligned_cols=45 Identities=22% Similarity=0.305 Sum_probs=37.0
Q ss_pred HHHHHHHhhhccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhc
Q 008582 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGE 225 (561)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd 225 (561)
.|+++.|=+|.|. .+++||+|+.-...+..+++.|+++|-+.||-
T Consensus 74 ~~~~e~i~~~~~~~~l~~~~~~~~vll~~p~~~~~~~r~~~~e~lfE~~~~ 124 (373)
T smart00268 74 WDDMEKIWDYTFFNELRVEPEEHPVLLTEPPMNPKSNREKILEIMFETFNF 124 (373)
T ss_pred HHHHHHHHHHHHhhhcCCCCccCeeEEecCCCCCHHHHHHHHHHhhccCCC
Confidence 5777777777775 35799999866667799999999999999984
No 289
>PTZ00004 actin-2; Provisional
Probab=25.15 E-value=89 Score=33.41 Aligned_cols=46 Identities=17% Similarity=0.151 Sum_probs=37.0
Q ss_pred HHHHHHHhhhccc------cCCCceEEEeccCCCHHHHHHHHHHHHHHhhcc
Q 008582 181 IKCLRSIKEYAFV------ASEYPVVITLEDHLTPDLQAKVAEMVTQTLGEI 226 (561)
Q Consensus 181 ~dvi~aI~~~AF~------~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~i~Gd~ 226 (561)
.|+.+.|=+|+|. .+++||+|+--.+++..++++|+++|-|.||-.
T Consensus 80 ~d~~e~i~~~~~~~~l~v~~~~~pvllte~~~~~~~~r~~~~e~lFE~~~~~ 131 (378)
T PTZ00004 80 WDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETHNVP 131 (378)
T ss_pred HHHHHHHHHHHHHhhcccCCccCcceeecCCCCcHHHHHHHHHHHHhhcCCc
Confidence 5667777777764 368999998666778899999999999999954
No 290
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=25.12 E-value=25 Score=24.41 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=6.6
Q ss_pred HHHHHhCCCcEEEEEeeCC
Q 008582 142 IIRALQKGVRVIELDIWPN 160 (561)
Q Consensus 142 Y~~aL~~GCRcvElD~Wdg 160 (561)
||.+|-+|+||- ++.|
T Consensus 1 yitclfrgarcr---vysg 16 (42)
T PF11478_consen 1 YITCLFRGARCR---VYSG 16 (42)
T ss_dssp ----B-TT-EEE---TT-S
T ss_pred CeEEEeccceEE---EecC
Confidence 788899999985 5554
No 291
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=24.66 E-value=31 Score=27.74 Aligned_cols=42 Identities=14% Similarity=0.199 Sum_probs=34.0
Q ss_pred EecccCCcCCCCchHHHHHHHHhhCCCCcCHHHHHHHHHHHcCC
Q 008582 12 FRRRFHVAASEAPDAVKSMFDQYSENGTMTVDHLHRFLIEVQKE 55 (561)
Q Consensus 12 ~~r~~~~~~~~~r~ei~~if~~~~~~~~l~~~~~~~Fl~~~Q~~ 55 (561)
++||.+++-.=+.+++.+||.. .+-.+|.+++..||+++..+
T Consensus 4 ILrkLRyal~l~d~~m~~if~l--~~~~vs~~el~a~lrke~~~ 45 (68)
T PF07308_consen 4 ILRKLRYALDLKDDDMIEIFAL--AGFEVSKAELSAWLRKEDEK 45 (68)
T ss_pred HHHHHHHHHcCChHHHHHHHHH--cCCccCHHHHHHHHCCCCCc
Confidence 4677777777778899999976 46889999999999987655
No 292
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively.
Probab=24.00 E-value=2.2e+02 Score=29.10 Aligned_cols=78 Identities=18% Similarity=0.286 Sum_probs=48.6
Q ss_pred CCCCCCCChHHHHHHHh----CCCcEEEEEeeCCCCCCCceEEe-CCc-ccccchHHHHHHHHhhhccccCCCceEEEec
Q 008582 131 NQLNSDCSDVPIIRALQ----KGVRVIELDIWPNSKKDNVDVLH-GGT-MTAPVELIKCLRSIKEYAFVASEYPVVITLE 204 (561)
Q Consensus 131 ~Ql~g~Ss~e~Y~~aL~----~GCRcvElD~Wdg~~~~~piv~H-G~T-lts~i~f~dvi~aI~~~AF~~S~yPvIlSlE 204 (561)
=||.| ++++.|.++.. .|+..|||.+.- |..-+ |.. +.++=...+++++|++.. +.||++-|-
T Consensus 94 vsi~g-~~~~~~~~~a~~~~~~G~d~iElN~~c------P~~~~~g~~~~~~~~~~~eiv~~vr~~~----~~Pv~vKl~ 162 (296)
T cd04740 94 ASIAG-STVEEFVEVAEKLADAGADAIELNISC------PNVKGGGMAFGTDPEAVAEIVKAVKKAT----DVPVIVKLT 162 (296)
T ss_pred EEEec-CCHHHHHHHHHHHHHcCCCEEEEECCC------CCCCCCcccccCCHHHHHHHHHHHHhcc----CCCEEEEeC
Confidence 35655 45777776664 499999999874 22222 222 234455679999999864 799998774
Q ss_pred cCCCHHHHHHHHHHHHH
Q 008582 205 DHLTPDLQAKVAEMVTQ 221 (561)
Q Consensus 205 ~Hcs~~qQ~~ma~~l~~ 221 (561)
.. .+.-..+|+.+.+
T Consensus 163 ~~--~~~~~~~a~~~~~ 177 (296)
T cd04740 163 PN--VTDIVEIARAAEE 177 (296)
T ss_pred CC--chhHHHHHHHHHH
Confidence 32 2334455665554
No 293
>PRK05395 3-dehydroquinate dehydratase; Provisional
Probab=23.85 E-value=77 Score=29.47 Aligned_cols=65 Identities=22% Similarity=0.358 Sum_probs=44.6
Q ss_pred CCCCCChHHHHHHHhCCCc--EEEEEeeCCCC-------------CCCceEEeCCccc-ccchHHHHHHHHhhhccccCC
Q 008582 133 LNSDCSDVPIIRALQKGVR--VIELDIWPNSK-------------KDNVDVLHGGTMT-APVELIKCLRSIKEYAFVASE 196 (561)
Q Consensus 133 l~g~Ss~e~Y~~aL~~GCR--cvElD~Wdg~~-------------~~~piv~HG~Tlt-s~i~f~dvi~aI~~~AF~~S~ 196 (561)
+.|.-+.+.+.+.|+.-|. -++++|.--.. +-..||---..+| ++|.++|++.++ .
T Consensus 22 iYG~~tl~~i~~~~~~~a~~~g~~v~~~QSN~EGelId~I~~a~~~~dgiiINpga~THtSiAl~DAl~~~--------~ 93 (146)
T PRK05395 22 IYGSTTLADIEALLEEEAAELGVELEFFQSNHEGELIDRIHEARDGADGIIINPGAYTHTSVALRDALAAV--------S 93 (146)
T ss_pred cCCCCCHHHHHHHHHHHHHHcCCEEEEEeeCcHHHHHHHHHhcccCCcEEEECchHHHHHHHHHHHHHHcC--------C
Confidence 6788899998888877555 56788852111 1123455444555 889999999887 5
Q ss_pred CceEEEeccCCC
Q 008582 197 YPVVITLEDHLT 208 (561)
Q Consensus 197 yPvIlSlE~Hcs 208 (561)
.|+ +|+|.|
T Consensus 94 ~P~---VEVHiS 102 (146)
T PRK05395 94 IPV---IEVHLS 102 (146)
T ss_pred CCE---EEEecC
Confidence 665 599987
No 294
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=22.07 E-value=72 Score=32.60 Aligned_cols=99 Identities=24% Similarity=0.298 Sum_probs=56.7
Q ss_pred ccccCCCCCCCCChHH---HHHHH-hCCCcEEEEEee-CCCCCCCceEEeC--CcccccchHHHHHHHHhhhccccCCCc
Q 008582 126 SYLTGNQLNSDCSDVP---IIRAL-QKGVRVIELDIW-PNSKKDNVDVLHG--GTMTAPVELIKCLRSIKEYAFVASEYP 198 (561)
Q Consensus 126 TYL~g~Ql~g~Ss~e~---Y~~aL-~~GCRcvElD~W-dg~~~~~piv~HG--~Tlts~i~f~dvi~aI~~~AF~~S~yP 198 (561)
+|++. |.-+.|. ++++| ..||-.|||.+= ..|--++|+|-.- ..|-..++++++++.+++-. ....-|
T Consensus 19 ~yi~a----G~P~~~~~~~~~~~l~~~Gad~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r-~~~~~p 93 (263)
T CHL00200 19 PFITA----GDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGINLNKILSILSEVN-GEIKAP 93 (263)
T ss_pred EEEeC----CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCccCHHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCC
Confidence 46653 3344443 44455 579999999873 2122345777643 34667788889999888876 446779
Q ss_pred eEEEeccCCCHHHHH---HHHHHHHHHhhccccCCC
Q 008582 199 VVITLEDHLTPDLQA---KVAEMVTQTLGEILFTPG 231 (561)
Q Consensus 199 vIlSlE~Hcs~~qQ~---~ma~~l~~i~Gd~L~~~~ 231 (561)
+||. -.-++=-|. +..+-+++.=-|-|++|+
T Consensus 94 ~vlm--~Y~N~i~~~G~e~F~~~~~~aGvdgviipD 127 (263)
T CHL00200 94 IVIF--TYYNPVLHYGINKFIKKISQAGVKGLIIPD 127 (263)
T ss_pred EEEE--ecccHHHHhCHHHHHHHHHHcCCeEEEecC
Confidence 7643 233443442 333333333334555553
No 295
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=21.70 E-value=90 Score=19.68 Aligned_cols=23 Identities=22% Similarity=0.706 Sum_probs=17.7
Q ss_pred HHHHHHHhhCC--CCcCHHHHHHHH
Q 008582 27 VKSMFDQYSEN--GTMTVDHLHRFL 49 (561)
Q Consensus 27 i~~if~~~~~~--~~l~~~~~~~Fl 49 (561)
|+..|+.+=.+ +.++.++|..|+
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 46678877433 889999999875
No 296
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=21.41 E-value=1.9e+02 Score=29.67 Aligned_cols=58 Identities=19% Similarity=0.183 Sum_probs=39.2
Q ss_pred ccCCCCCCCCChHHHHHHHhCCCcEEEEEe--eCCCCCCCceEEeCCcccc--c----chHHHHHHHHhhh
Q 008582 128 LTGNQLNSDCSDVPIIRALQKGVRVIELDI--WPNSKKDNVDVLHGGTMTA--P----VELIKCLRSIKEY 190 (561)
Q Consensus 128 L~g~Ql~g~Ss~e~Y~~aL~~GCRcvElD~--Wdg~~~~~piv~HG~Tlts--~----i~f~dvi~aI~~~ 190 (561)
.+|+-+. ++++.-.||..|+-.||+|+ |++. .+=-.+||-.-++ . -.|.+.++.+++-
T Consensus 2 ~iaHmVn---~~~~v~~~l~~GANaiE~Dv~f~~~~--~~~~~~Hg~pcdc~r~c~~~~~f~~~l~~~r~~ 67 (265)
T cd08576 2 AIAHMVN---DLEGVDDALDHGANAIEIDVTFWSNG--TGWWADHDVPCDCFRGCTAREMFDEILDYRRNG 67 (265)
T ss_pred cchhhhc---cHHHHHHHHHcCCCceeEEEEEccCC--cEEEeeCCCccccccCCcHHHHHHHHHHHHHhc
Confidence 3444444 48899999999999999999 4432 2336889876555 2 3455666666654
No 297
>PF08671 SinI: Anti-repressor SinI; InterPro: IPR010981 The SinR repressor is part of a group of Sin (sporulation inhibition) proteins in Bacillus subtilis that regulate the commitment to sporulation in response to extreme adversity []. SinR is a tetrameric repressor protein that binds to the promoters of genes essential for entry into sporulation and prevents their transcription. This repression is overcome through the activity of SinI, which disrupts the SinR tetramer through the formation of a SinI-SinR heterodimer, thereby allowing sporulation to proceed. The SinR structure consists of two domains: a dimerisation domain stabilised by a hydrophobic core, and a DNA-binding domain that is identical to domains of the bacteriophage 434 CI and Cro proteins that regulate prophage induction. The dimerisation domain is a four-helical bundle formed from two helices from the C-terminal residues of SinR and two helices from the central residues of SinI. These regions in SinR and SinI are similar in both structure and sequence. The interaction of SinR monomers to form tetramers is weaker than between SinR and SinI, since SinI can effectively disrupt SinR tetramers. This entry represents the dimerisation domain in both SinI and SinR proteins.; GO: 0005488 binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1B0N_A 2YAL_A.
Probab=21.18 E-value=96 Score=20.90 Aligned_cols=25 Identities=8% Similarity=0.246 Sum_probs=14.8
Q ss_pred HHHHHHHHhhCCCCcCHHHHHHHHHH
Q 008582 26 AVKSMFDQYSENGTMTVDHLHRFLIE 51 (561)
Q Consensus 26 ei~~if~~~~~~~~l~~~~~~~Fl~~ 51 (561)
|...|... |....+|+++|+.||..
T Consensus 4 EW~~Li~e-A~~~Gls~eeir~FL~~ 28 (30)
T PF08671_consen 4 EWVELIKE-AKESGLSKEEIREFLEF 28 (30)
T ss_dssp HHHHHHHH-HHHTT--HHHHHHHHHH
T ss_pred HHHHHHHH-HHHcCCCHHHHHHHHHh
Confidence 33344433 23478999999999974
No 298
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=20.65 E-value=3.3e+02 Score=26.32 Aligned_cols=60 Identities=15% Similarity=0.308 Sum_probs=0.0
Q ss_pred CchHHHHHHHHhh----C-C-CCcCHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhhhhhhhccCCCCHHHHHHhh
Q 008582 23 APDAVKSMFDQYS----E-N-GTMTVDHLHRFLIEVQKEDKASKEDAQAIIDSLRELKHLNIFQRRGLNLEAFFKYL 93 (561)
Q Consensus 23 ~r~ei~~if~~~~----~-~-~~l~~~~~~~Fl~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~l~~~gF~~~L 93 (561)
++.||..|+..|. . + +.||.++|..-..-.+.. -+..||+.+. ...+...+++.+|.+.|
T Consensus 28 s~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np------~~~rI~~~f~-----~~~~~~~v~F~~Fv~~l 93 (187)
T KOG0034|consen 28 SANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNP------LADRIIDRFD-----TDGNGDPVDFEEFVRLL 93 (187)
T ss_pred CHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCc------HHHHHHHHHh-----ccCCCCccCHHHHHHHH
No 299
>PRK08136 glycosyl transferase family protein; Provisional
Probab=20.56 E-value=90 Score=32.84 Aligned_cols=25 Identities=12% Similarity=0.116 Sum_probs=20.1
Q ss_pred CCceEEeCC-cccccchHHHHHHHHh
Q 008582 164 DNVDVLHGG-TMTAPVELIKCLRSIK 188 (561)
Q Consensus 164 ~~piv~HG~-Tlts~i~f~dvi~aI~ 188 (561)
+-||+.||. ..++++.-.||+++..
T Consensus 109 G~~V~kHGnr~vssk~gsadvleaLG 134 (317)
T PRK08136 109 GVPVLVHGVSEDPTRVTSAEIFEALG 134 (317)
T ss_pred CCeEEEECCCCCCCcccHHHHHHHcC
Confidence 458999996 5778888889988865
No 300
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=20.47 E-value=74 Score=35.93 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=36.5
Q ss_pred ccCCCCCCCCCh--HHHHHHHhCCCcEE------EEE-eeCCCCC-----------------CCceEEeCC-cccccchH
Q 008582 128 LTGNQLNSDCSD--VPIIRALQKGVRVI------ELD-IWPNSKK-----------------DNVDVLHGG-TMTAPVEL 180 (561)
Q Consensus 128 L~g~Ql~g~Ss~--e~Y~~aL~~GCRcv------ElD-~Wdg~~~-----------------~~piv~HG~-Tlts~i~f 180 (561)
|++-.++|++.- .++.+|++.=+.-+ -+| ||-|.|+ +-||+.||. ..|++..-
T Consensus 234 L~alr~kget~~El~g~~~a~~~~~~~~~~~~~~~~D~~gtggdg~~t~nist~~a~v~A~~G~~V~kHG~r~~ss~~Gs 313 (534)
T PRK14607 234 LTALRMKGETADELAGFASVMREKSRHIPAPSPRTVDTCGTGGDGFGTFNISTTSAFVVAAAGVPVAKHGNRAVSSKSGS 313 (534)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHhCCcCCCCCCCceEEccCCCCCCCccccHHHHHHHHHhCCCcEEEECCCCCCCCccH
Confidence 333344555443 36777776433311 255 5766543 458999996 56777777
Q ss_pred HHHHHHHh
Q 008582 181 IKCLRSIK 188 (561)
Q Consensus 181 ~dvi~aI~ 188 (561)
.||++++.
T Consensus 314 advle~lG 321 (534)
T PRK14607 314 ADVLEALG 321 (534)
T ss_pred HHHHHHcC
Confidence 78887764
Done!