Query 008583
Match_columns 560
No_of_seqs 403 out of 1870
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 06:56:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2x47_A Macro domain-containing 100.0 3.8E-49 1.3E-53 389.5 20.7 208 20-255 27-235 (235)
2 3q6z_A Poly [ADP-ribose] polym 100.0 4.1E-44 1.4E-48 348.5 20.0 183 71-253 25-214 (214)
3 1spv_A Putative polyprotein/ph 100.0 2.6E-43 8.9E-48 336.5 22.0 174 82-257 2-180 (184)
4 1yd9_A Core histone macro-H2A. 100.0 9.2E-43 3.1E-47 334.9 21.1 180 71-253 7-192 (193)
5 3q71_A Poly [ADP-ribose] polym 100.0 1.8E-42 6E-47 337.8 22.1 178 77-255 33-218 (221)
6 2xd7_A Core histone macro-H2A. 100.0 2.8E-42 9.5E-47 331.7 21.8 176 72-250 8-192 (193)
7 4abl_A Poly [ADP-ribose] polym 100.0 5.7E-42 1.9E-46 325.9 19.5 159 81-250 20-180 (183)
8 3kh6_A Poly [ADP-ribose] polym 100.0 7.3E-40 2.5E-44 314.7 20.4 159 81-250 31-191 (199)
9 2dx6_A Hypothetical protein TT 100.0 7.2E-39 2.5E-43 299.2 17.6 157 83-248 2-159 (159)
10 1vhu_A Hypothetical protein AF 100.0 7.3E-39 2.5E-43 311.7 16.4 166 81-253 19-202 (211)
11 3eti_A X (ADRP) domain, macro 100.0 4.3E-39 1.5E-43 301.6 12.9 150 82-249 9-167 (168)
12 2acf_A Replicase polyprotein 1 100.0 8.4E-39 2.9E-43 303.6 13.6 163 71-256 8-179 (182)
13 3gpg_A NSP3, non-structural pr 100.0 1.2E-38 4.1E-43 298.1 13.7 155 84-250 11-166 (168)
14 3gqe_A Non-structural protein 100.0 1.3E-37 4.3E-42 291.4 16.7 157 82-250 3-160 (168)
15 3ejg_A Non-structural protein 100.0 4.2E-37 1.4E-41 292.8 13.8 148 81-249 36-192 (193)
16 2vri_A Non-structural protein 100.0 1.3E-35 4.6E-40 280.4 12.3 157 68-249 6-171 (174)
17 3ejf_A Non-structural protein 100.0 1.1E-34 3.8E-39 272.8 13.9 155 77-248 8-175 (176)
18 1njr_A 32.1 kDa protein in ADH 100.0 5E-35 1.7E-39 294.8 8.6 173 82-263 44-254 (284)
19 4gua_A Non-structural polyprot 100.0 7E-32 2.4E-36 284.6 16.7 155 83-249 344-499 (670)
20 3pg7_A Neurofibromin; SEC lipi 100.0 1.6E-30 5.6E-35 260.3 12.2 157 386-542 1-158 (256)
21 3peg_A Neurofibromin; SEC14 do 99.9 2E-27 7E-32 241.2 9.7 164 374-537 5-172 (290)
22 2jyc_A Uncharacterized protein 99.9 1.4E-24 4.8E-29 202.2 15.8 130 81-219 18-150 (160)
23 2eee_A Uncharacterized protein 99.9 1.3E-24 4.5E-29 200.4 14.3 130 81-219 7-139 (149)
24 2fg1_A Conserved hypothetical 99.9 6.9E-23 2.4E-27 190.7 12.8 132 83-218 4-147 (158)
25 3hx3_A Retinaldehyde-binding p 99.8 3.1E-21 1.1E-25 199.2 9.4 141 389-529 135-285 (316)
26 1r5l_A Alpha-TTP, protein (alp 99.8 2.8E-20 9.7E-25 186.3 13.0 141 388-529 75-226 (262)
27 1aua_A Phosphatidylinositol tr 99.8 2.9E-19 1E-23 182.5 11.6 138 392-529 100-258 (296)
28 3q8g_A CRAL-TRIO domain-contai 99.8 4.4E-19 1.5E-23 183.3 10.4 138 392-529 115-273 (320)
29 1olm_A SEC14-like protein 2; l 99.8 3.2E-18 1.1E-22 182.3 12.9 130 400-529 88-238 (403)
30 3sig_A PArg, poly(ADP-ribose) 98.7 2.5E-08 8.5E-13 99.7 9.7 167 82-249 64-275 (277)
31 3jru_B Probable cytosol aminop 50.2 2.5E+02 0.0085 29.8 14.4 109 83-195 3-113 (490)
32 3h8g_F Cytosol aminopeptidase; 39.0 2.7E+02 0.0091 29.7 12.5 108 84-196 2-112 (497)
33 2vg0_A Short-chain Z-isoprenyl 34.3 53 0.0018 31.3 5.7 50 173-223 32-81 (227)
34 3l7q_A Putative translation in 29.8 1.4E+02 0.0048 25.2 7.2 50 205-254 45-97 (125)
35 3k0t_A Endoribonuclease L-PSP, 29.1 1.4E+02 0.0047 26.1 7.1 49 205-253 63-114 (143)
36 1qd9_A Purine regulatory prote 27.2 1.7E+02 0.0059 24.5 7.3 49 205-253 44-95 (124)
37 3kjj_A NMB1025 protein; YJGF p 26.6 1.6E+02 0.0055 25.1 7.0 50 205-254 42-94 (128)
38 3r0p_A L-PSP putative endoribo 25.7 1.7E+02 0.0059 24.6 7.0 48 206-253 49-99 (127)
39 1qu9_A YJGF protein; structura 25.2 1.1E+02 0.0039 25.8 5.7 49 205-253 45-96 (128)
40 3k12_A Uncharacterized protein 23.9 1.7E+02 0.0058 24.6 6.5 47 208-254 37-86 (122)
41 2q3l_A Uncharacterized protein 23.7 1.6E+02 0.0054 24.9 6.4 114 395-518 7-120 (126)
42 3ugs_B Undecaprenyl pyrophosph 23.6 2.4E+02 0.0082 26.7 8.1 48 175-223 37-84 (225)
43 3lyb_A Putative endoribonuclea 23.6 73 0.0025 28.7 4.3 46 208-253 71-119 (165)
44 3gtz_A Putative translation in 23.0 1.7E+02 0.0057 24.7 6.4 47 207-253 38-87 (124)
45 2cvl_A TTHA0137, protein trans 22.3 2.4E+02 0.0082 23.6 7.2 49 206-254 45-96 (124)
46 1qah_A Perchloric acid soluble 22.1 2.3E+02 0.0078 24.2 7.1 49 205-253 49-100 (136)
47 1x25_A Hypothetical UPF0076 pr 21.6 1.8E+02 0.0063 24.5 6.3 48 206-253 49-99 (128)
48 1pf5_A Hypothetical protein YJ 21.3 2.2E+02 0.0075 24.1 6.8 50 205-254 48-101 (131)
49 3dhn_A NAD-dependent epimerase 21.1 60 0.002 29.6 3.3 43 150-195 68-110 (227)
50 3v4d_A Aminoacrylate peracid r 20.9 2.4E+02 0.0083 23.9 7.1 48 206-253 54-104 (134)
51 3vcz_A Endoribonuclease L-PSP; 20.8 1.4E+02 0.0046 26.5 5.5 49 205-253 69-120 (153)
52 1xrg_A Putative translation in 20.4 2.4E+02 0.0083 24.9 7.1 49 205-253 77-128 (156)
53 1jd1_A Hypothetical 13.9 kDa p 20.4 2E+02 0.0068 24.3 6.3 48 207-254 50-100 (129)
54 2b33_A Protein synthesis inhib 20.1 2E+02 0.0068 24.9 6.4 49 205-253 58-109 (140)
No 1
>2x47_A Macro domain-containing protein 1; signaling protein, signal transduction, estrogen signaling; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-49 Score=389.47 Aligned_cols=208 Identities=39% Similarity=0.671 Sum_probs=188.2
Q ss_pred CceeecCCCCCCchhhcccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccccCCCCEEEEEEcCCccccccE
Q 008583 20 DSVVTLDQVPRWSDAEHRLSLDYESEDPSFSNSYFADPLASSSGAESSGNGMVSRFPVDHEINSKIYLWRGNPWNLEVDT 99 (560)
Q Consensus 20 ~~~v~~~~l~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~n~~I~i~~GDI~~~~vDa 99 (560)
+++|++++||+|++..... . +....+.|+++..+|.+|.|++|||+++++||
T Consensus 27 ~~~v~~~~ip~w~~~~~~~-------~---------------------~~~~~~~~~~~~~~~~~i~i~~GDIt~~~vDa 78 (235)
T 2x47_A 27 KDFVRLKKIPTWKEMAKGV-------A---------------------VKVEEPRYKKDKQLNEKISLLRSDITKLEVDA 78 (235)
T ss_dssp SCCEEGGGSCCHHHHHTTC-------C---------------------------CCCCCHHHHTTEEEEESCGGGEESSE
T ss_pred cCccchhhCCcHHHhcccc-------C---------------------ccccCCCCCcccccCCEEEEEeCccCcccCCE
Confidence 4699999999999855410 0 01124678899999999999999999999999
Q ss_pred EEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCCccCCCCchhHHHHHHHHHH
Q 008583 100 VVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYR 178 (560)
Q Consensus 100 IVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~ 178 (560)
|||+||++|.+||| ++||+++||++|++||+++++|++|++++|+||+|||+||||+|||.|+++......+.|++||+
T Consensus 79 IVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~g~~~~G~a~iT~~~~L~~k~VIH~vgP~~~~~~~~~~~~~L~~~y~ 158 (235)
T 2x47_A 79 IVNAANSSLLGGGGVDGCIHRAAGPLLTDECRTLQSCKTGKAKITGGYRLPAKYVIHTVGPIAYGEPSASQAAELRSCYL 158 (235)
T ss_dssp EEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHTSCCCCBTCEEEEECTTSSSSEEEEEBCCCCTTCCCHHHHHHHHHHHH
T ss_pred EEEecCcccCCccHHHHHHHHHhCHHHHHHHHHhCCCCCCceEEecCCCCCCCEEEEecCccccCCCCcchHHHHHHHHH
Confidence 99999999998887 58999999999999999999999999999999999999999999999987555566789999999
Q ss_pred HHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhHHHHHHHHhhhcCCCC
Q 008583 179 SCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDTEIYKRLLPLYFPRD 255 (560)
Q Consensus 179 ~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~~~~~~~~y~~~l~~yfpr~ 255 (560)
+||++|.+++++|||||+||||++|||++++|++|++++++|+++++.++++|+||++++.++++|+++|+.||||.
T Consensus 159 ~~L~~A~e~~i~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~~~~~~l~~V~fv~f~~~~~~~y~~~l~~~fp~~ 235 (235)
T 2x47_A 159 SSLDLLLEHRLRSVAFPCISTGVFGYPCEAAAEIVLATLREWLEQHKDKVDRLIICVFLEKDEDIYRSRLPHYFPVA 235 (235)
T ss_dssp HHHHHHHHTTCCEEEECCTTCSTTSCCHHHHHHHHHHHHHHHHHHHGGGCSEEEEEECSHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEECCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999887779999999999999999999999999984
No 2
>3q6z_A Poly [ADP-ribose] polymerase 14; structural genomics consortium, SGC, ADP-ribose binding, TRA; HET: APR; 2.23A {Homo sapiens}
Probab=100.00 E-value=4.1e-44 Score=348.47 Aligned_cols=183 Identities=22% Similarity=0.313 Sum_probs=169.7
Q ss_pred CCCCcccccCCCCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEeec
Q 008583 71 MVSRFPVDHEINSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNA 145 (560)
Q Consensus 71 ~~~~f~~~~~~n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT~~ 145 (560)
....|.+....+.+|.||+|||+++++|||||+||++|.++|| ++||+++||++|++||+++ ++|++|++++|+|
T Consensus 25 ~~~~~~~~~~~g~~I~v~~GDIt~~~vDaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~ 104 (214)
T 3q6z_A 25 QKCFSRTVLAPGVVLIVQQGDLARLPVDVVVNASNEDLKHYGGLAAALSKAAGPELQADCDQIVKREGRLLPGNATISKA 104 (214)
T ss_dssp --CCEEEEEETTEEEEEEECCTTSCSSSEEEEEECTTCCCCSHHHHHHHHHHCTHHHHHHHHHHHHHCCCCTTCEEEEEC
T ss_pred CeeEEEEEcCCCcEEEEEecccccCcCCEEEeCCCCCCCCCchHHHHHHHhhhHHHHHHHHHHHHHcCCCCCCeEEEEcC
Confidence 3456788888899999999999999999999999999998876 5899999999999999876 8999999999999
Q ss_pred CCCCCCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC
Q 008583 146 YDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK 225 (560)
Q Consensus 146 ~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~ 225 (560)
|+||||||||||||.|+.+......+.|++||++||++|.+++++|||||+||||++|||++++|++|+++|++|+++++
T Consensus 105 ~~L~~k~VIH~VgP~~~~~~~~~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~g~P~~~aA~i~~~av~~fl~~~~ 184 (214)
T 3q6z_A 105 GKLPYHHVIHAVGPRWSGYEAPRCVYLLRRAVQLSLCLAEKYKYRSIAIPAISSGVFGFPLGRCVETIVSAIKENFQFKK 184 (214)
T ss_dssp TTSSSSEEEEEECCCCCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHTSSCC
T ss_pred CCCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHcCCcEEEECcccCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999876555678999999999999999999999999999999999999999999999999998874
Q ss_pred --CCccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 226 --DKISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 226 --~~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
.++++|+||+++++++++|++.+..||.
T Consensus 185 ~~~~l~~V~fv~~d~~~~~~f~~~l~~~f~ 214 (214)
T 3q6z_A 185 DGHCLKEIYLVDVSEKTVEAFAEAVKTVFK 214 (214)
T ss_dssp --CCCCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred CCCCCCEEEEEeCCHHHHHHHHHHHHHhhC
Confidence 6899999999999999999999999983
No 3
>1spv_A Putative polyprotein/phosphatase; structural genomoics, alpha/beta monomeric protein, structural genomics, PSI, protein structure initiative; HET: MES; 2.00A {Escherichia coli} SCOP: c.50.1.2
Probab=100.00 E-value=2.6e-43 Score=336.49 Aligned_cols=174 Identities=33% Similarity=0.547 Sum_probs=158.6
Q ss_pred CCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEeecCCCCCCeEEEE
Q 008583 82 NSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNAYDLPARRVIHT 156 (560)
Q Consensus 82 n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT~~~~L~~k~IIH~ 156 (560)
|.+|.+++|||+++++|||||+||++|.+||| ++||+++||++|++||+++ ++|++|++++|+||+||||||||+
T Consensus 2 ~~~i~i~~GDIt~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~e~~~~~~~~g~~~~G~a~iT~~~~L~~k~VIH~ 81 (184)
T 1spv_A 2 KTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGPALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHT 81 (184)
T ss_dssp -CCEEEEESCGGGCCCSEEEEECCTTCSCCSHHHHHHHHHHCHHHHHHHHHHHHHHCSCCTTCEEEECCTTSSSSEEEEE
T ss_pred CCeEEEEeCcCCcCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHhcCCCCCCCEEEeeCCCCCCCEEEEE
Confidence 57899999999999999999999999998876 5899999999999999987 899999999999999999999999
Q ss_pred cCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEec
Q 008583 157 VGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTT 236 (560)
Q Consensus 157 VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~ 236 (560)
|||.|+.+... ..+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++ .+++|+||++
T Consensus 82 vgP~~~~~~~~-~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~-~~~~V~~v~~ 159 (184)
T 1spv_A 82 VGPVWRGGEQN-EDQLLQDAYLNSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHA-LPEQVYFVCY 159 (184)
T ss_dssp CCCCCSSSSSS-HHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHHCC-SSSEEEEEES
T ss_pred cCCcccCCCcc-hHHHHHHHHHHHHHHHHHhCCceEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhCC-CCCEEEEEEC
Confidence 99999876543 468999999999999999999999999999999999999999999999999999875 5889999999
Q ss_pred ChhHHHHHHHHhhhcCCCChh
Q 008583 237 TASDTEIYKRLLPLYFPRDKH 257 (560)
Q Consensus 237 ~~~~~~~y~~~l~~yfpr~~~ 257 (560)
++.++++|+++|..|||+...
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~ 180 (184)
T 1spv_A 160 DEENAHLYERLLTQQGDEEHH 180 (184)
T ss_dssp SHHHHHHHHHHHHCC------
T ss_pred CHHHHHHHHHHHHHhCCcccc
Confidence 999999999999999997643
No 4
>1yd9_A Core histone macro-H2A.1; alpha-beta structure, A1PP domain, macro-domain, structural protein; 1.60A {Rattus norvegicus} SCOP: c.50.1.2 PDB: 1zr3_A* 2fxk_A 3iid_A* 3iif_A* 1zr5_A
Probab=100.00 E-value=9.2e-43 Score=334.86 Aligned_cols=180 Identities=22% Similarity=0.321 Sum_probs=164.6
Q ss_pred CCCCcccccCCCCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEeec
Q 008583 71 MVSRFPVDHEINSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNA 145 (560)
Q Consensus 71 ~~~~f~~~~~~n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT~~ 145 (560)
.+-.+......|.+|.|++|||+++++|||||+||++|.+||| +++|+++||++|++||+++ ++|++|++++|+|
T Consensus 7 ~~~~~~~~~~~~~~i~i~~GDIt~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~~ 86 (193)
T 1yd9_A 7 FTVLSTKSLFLGQKLQVVQADIASIDSDAVVHPTNTDFYIGGEVGSTLEKKGGKEFVEAVLELRKKNGPLEVAGAAVSAG 86 (193)
T ss_dssp CCEEEEEECTTSCEEEEECSCGGGCCCSEEEEECCTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTCEEEEEC
T ss_pred ceEecccCcCCCCEEEEEeCccCcCcCCEEEECCCccCCCCchHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCEEEecC
Confidence 3445566777899999999999999999999999999998876 5899999999999999875 8999999999999
Q ss_pred CCCCCCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC
Q 008583 146 YDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK 225 (560)
Q Consensus 146 ~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~ 225 (560)
|+||||||||+|||.|... ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++
T Consensus 87 ~~L~~k~VIH~vgP~~~~~---~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~~~ 163 (193)
T 1yd9_A 87 HGLPAKFVIHCNSPVWGSD---KCEELLEKTVKNCLALADDRKLKSIAFPSIGSGRNGFPKQTAAQLILKAISSYFVSTM 163 (193)
T ss_dssp TTSSSSEEEEECCCCTTST---THHHHHHHHHHHHHHHHHHTTCSEEEECCCSBSTTCBCHHHHHHHHHHHHHHHHTTCT
T ss_pred CCCCCCEEEEeCCCCcCCc---chHHHHHHHHHHHHHHHHHhCCceEeecccccCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999753 3568999999999999999999999999999999999999999999999999998764
Q ss_pred -CCccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 226 -DKISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 226 -~~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
.++++|+||+++++++++|++.|..+.+
T Consensus 164 ~~~l~~V~fv~~~~~~~~~~~~~l~~~~~ 192 (193)
T 1yd9_A 164 SSSIKTVYFVLFDSESIGIYVQEMAKLDA 192 (193)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHTTTTC
T ss_pred CCCcCEEEEEECCHHHHHHHHHHHHhhhc
Confidence 5789999999999999999999876544
No 5
>3q71_A Poly [ADP-ribose] polymerase 14; structural genomics, structural genomics consortium, SGC, transferase, PARP14 macro 2; HET: AR6; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=337.75 Aligned_cols=178 Identities=25% Similarity=0.332 Sum_probs=161.0
Q ss_pred cccCCCCEEEEEEcCCccccccEEEEcCCcCCC-CCCc-hHHHHHhhChhHHHHHHHhC---CCCCCCEEEeecCCCCCC
Q 008583 77 VDHEINSKIYLWRGNPWNLEVDTVVNSTNENLD-EAHS-SPGLHAAAGPGLAEECATLG---GCRTGMAKVTNAYDLPAR 151 (560)
Q Consensus 77 ~~~~~n~~I~i~~GDI~~~~vDaIVN~aN~~l~-~~~~-~~aI~~~aG~~L~~e~~~~~---~~~~G~~~vT~~~~L~~k 151 (560)
+....|.+|.||+|||+++++|||||+||++|. ++|| ++||+++||++|++||++++ +|++|++++|+||+||||
T Consensus 33 ~~t~~g~~I~i~~GDIt~~~vDAIVNaAN~~l~~~gGGV~~AI~~aaG~~L~~ec~~~~~~~~~~~G~a~iT~g~~Lp~k 112 (221)
T 3q71_A 33 LVSPGGLQMLLVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQGVAVSMGTVLKTSSWNLDCR 112 (221)
T ss_dssp EECTTCCEEEEEESCGGGCCSSEEEEECCTTCCTTSSHHHHHHHHHHCTHHHHHHHHHHHTSCCCTTCEEEEECTTSSSS
T ss_pred eeecCCcEEEEEeCcccCCcCCEEEECCCCCCCCCCchHHHHHHHHHhHHHHHHHHHHhccCCCCCCeEEEEcCCCCCCC
Confidence 345678999999999999999999999999995 5554 58999999999999999874 899999999999999999
Q ss_pred eEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC-CCccE
Q 008583 152 RVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK-DKISA 230 (560)
Q Consensus 152 ~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~-~~i~~ 230 (560)
||||||||.|+.+.. ...+.|++||++||++|.+++++|||||+||||++|||++++|++|+++|++|+++++ .++++
T Consensus 113 ~VIHtVgP~~~~~~~-~~~~~L~~~y~~~L~~A~e~~i~SIAfPaIsTG~~G~P~~~aA~i~~~~v~~fl~~~~~~~l~~ 191 (221)
T 3q71_A 113 YVLHVVAPEWRNGST-SSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTLQE 191 (221)
T ss_dssp EEEEECCCCCTTTCH-HHHHHHHHHHHHHHHHHHHTTCCEEEEECTTSSTTCCCHHHHHHHHHHHHHHHHHHCCCSSCCE
T ss_pred EEEEeCCCCCcCCCc-hHHHHHHHHHHHHHHHHHHhCCceEeeccccCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 999999999988764 3468999999999999999999999999999999999999999999999999999985 68999
Q ss_pred EEEEecCh--hHHHHHHHHhhhcCCCC
Q 008583 231 VVFCTTTA--SDTEIYKRLLPLYFPRD 255 (560)
Q Consensus 231 V~fv~~~~--~~~~~y~~~l~~yfpr~ 255 (560)
|+||++++ ..+++|++.|...||.+
T Consensus 192 V~fv~f~~d~~~~~~f~~~l~~r~~~~ 218 (221)
T 3q71_A 192 VHFLLHPSDHENIQAFSDEFARRANGN 218 (221)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHC--
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHccCC
Confidence 99999965 45699999999988844
No 6
>2xd7_A Core histone macro-H2A.2; chromosomal protein, nucleosome core, chromatin regulator, nucleus, DNA-binding protein, phosphoprotein; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=331.67 Aligned_cols=176 Identities=20% Similarity=0.321 Sum_probs=162.1
Q ss_pred CCCcccccCCCCEEEEEEcCCccc---cccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEe
Q 008583 72 VSRFPVDHEINSKIYLWRGNPWNL---EVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVT 143 (560)
Q Consensus 72 ~~~f~~~~~~n~~I~i~~GDI~~~---~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT 143 (560)
+..+......|.+|.+++|||+++ ++|||||+||++|.+||| ++||+++||++|++||+++ ++|++|++++|
T Consensus 8 ~~~~~~~~~~~~~i~i~~GDIt~~~~~~~DaIVNaaN~~l~~ggGv~~aI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT 87 (193)
T 2xd7_A 8 TILSSKSLVLGQKLSLTQSDISHIGSMRVEGIVHPTTAEIDLKEDIGKALEKAGGKEFLETVKELRKSQGPLEVAEAAVS 87 (193)
T ss_dssp EEEEEEECTTSCEEEEEECCGGGGGGCCCSEEEEEECTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHTCSCCTTCEEEE
T ss_pred eEecccccCCCCEEEEEeCcccccCCCCCCEEEECCCccCCCccHHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCeEEe
Confidence 334456667899999999999999 999999999999998886 5899999999999999875 89999999999
Q ss_pred ecCCCCCCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008583 144 NAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (560)
Q Consensus 144 ~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~ 223 (560)
+||+||||||||+|||.|..+ ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++
T Consensus 88 ~~~~L~~k~VIH~vgP~~~~~---~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~~l~~ 164 (193)
T 2xd7_A 88 QSSGLAAKFVIHCHIPQWGSD---KCEEQLEETIKNCLSAAEDKKLKSVAFPPFPSGRNCFPKQTAAQVTLKAISAHFDD 164 (193)
T ss_dssp ECTTSSSSEEEEEECCCTTST---THHHHHHHHHHHHHHHHHHTTCSEEEECCCCCSTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCCEEEEECCCcCCCc---chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999754 35689999999999999999999999999999999999999999999999999998
Q ss_pred cC-CCccEEEEEecChhHHHHHHHHhhh
Q 008583 224 QK-DKISAVVFCTTTASDTEIYKRLLPL 250 (560)
Q Consensus 224 ~~-~~i~~V~fv~~~~~~~~~y~~~l~~ 250 (560)
++ +++++|+||+++++++++|++.|..
T Consensus 165 ~~~~~l~~V~fv~~~~~~~~~~~~~l~~ 192 (193)
T 2xd7_A 165 SSASSLKNVYFLLFDSESIGIYVQEMAK 192 (193)
T ss_dssp CSSCCCCEEEEEECSHHHHHHHHHHHHC
T ss_pred cCCCCCCEEEEEECCHHHHHHHHHHHhh
Confidence 65 5789999999999999999998853
No 7
>4abl_A Poly [ADP-ribose] polymerase 14; transferase, PARP14; 1.15A {Homo sapiens} PDB: 4abk_A
Probab=100.00 E-value=5.7e-42 Score=325.92 Aligned_cols=159 Identities=18% Similarity=0.219 Sum_probs=152.3
Q ss_pred CCCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCC
Q 008583 81 INSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGP 159 (560)
Q Consensus 81 ~n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP 159 (560)
++.+|++|+|||+++++|||||+||++|.+++| ++||+++||++|++||+++++|++|++++|+||+||||||||+|||
T Consensus 20 g~~~i~i~~GDIt~~~~DaIVNaaN~~l~~ggGV~~aI~~aaG~~l~~ec~~~~~~~~G~a~iT~~~~L~~k~VIH~vgP 99 (183)
T 4abl_A 20 GSIIFQVASGDITKEEADVIVNSTSNSFNLKAGVSKAILECAGQNVERECSQQAQQRKNDYIITGGGFLRCKNIIHVIGG 99 (183)
T ss_dssp TTEEEEEEESCGGGCBCSEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHHHHSCCSEEEEECTTSBSSEEEEEETT
T ss_pred CCEEEEEEeCcccCcccCEEEECCCCCCCCCccHHHHHHHHhhHHHHHHHHHhcCCCCCceEEecCCCCCCCEEEEeCcH
Confidence 678999999999999999999999999998876 5899999999999999999999999999999999999999999999
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC-CCccEEEEEecCh
Q 008583 160 KYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK-DKISAVVFCTTTA 238 (560)
Q Consensus 160 ~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~-~~i~~V~fv~~~~ 238 (560)
.| |++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++ ..+++|+||++++
T Consensus 100 ~~-----------L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~i~~~~v~~fl~~~~~~~l~~V~fv~f~~ 168 (183)
T 4abl_A 100 ND-----------VKSSVSSVLQECEKKNYSSICLPAIGTGNAKQHPDKVAEAIIDAIEDFVQKGSAQSVKKVKVVIFLP 168 (183)
T ss_dssp SC-----------HHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHTTCCSSCCEEEEEESCH
T ss_pred HH-----------HHHHHHHHHHHHHHcCCCeEeeccccCCCCCcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECCH
Confidence 75 99999999999999999999999999999999999999999999999999985 6899999999999
Q ss_pred hHHHHHHHHhhh
Q 008583 239 SDTEIYKRLLPL 250 (560)
Q Consensus 239 ~~~~~y~~~l~~ 250 (560)
+++++|++.|..
T Consensus 169 ~~~~~f~~~l~k 180 (183)
T 4abl_A 169 QVLDVFYANMKK 180 (183)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999998864
No 8
>3kh6_A Poly [ADP-ribose] polymerase 15; macro, PARP, BAL3, B-aggressive lymphoma protein 3, SGC, structural genomics consortium, alternative splicing; HET: APR; 2.20A {Homo sapiens} PDB: 3v2b_A*
Probab=100.00 E-value=7.3e-40 Score=314.69 Aligned_cols=159 Identities=19% Similarity=0.191 Sum_probs=152.0
Q ss_pred CCCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCC
Q 008583 81 INSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGP 159 (560)
Q Consensus 81 ~n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP 159 (560)
++.+|++|+|||+++++|||||++|++|.+|+| ++||+++||++|++||+++++|++|++++|+||+|+||||||+|||
T Consensus 31 ~~~~i~i~~GDIt~~~vDaIVNaaN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~~G~a~iT~g~~L~~k~VIH~vgp 110 (199)
T 3kh6_A 31 GAITFQVATGDIATEQVDVIVNSTARTFNRKSGVSRAILEGAGQAVESECAVLAAQPHRDFIITPGGCLKCKIIIHVPGG 110 (199)
T ss_dssp TTEEEEEEESCGGGCCSSEEEEEECTTSCCCSTHHHHHHHHHCHHHHHHHHHHHTSCCCSSEEEECTTSSSSEEEEEETT
T ss_pred CCEEEEEEecccccCcCCEEEECCCCCCCCCchHHHHHHHHhhHHHHHHHHHhCCCCCCeEEEecCCCCCCCEEEEeCCC
Confidence 678999999999999999999999999998876 5899999999999999999999999999999999999999999999
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcC-CCccEEEEEecCh
Q 008583 160 KYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQK-DKISAVVFCTTTA 238 (560)
Q Consensus 160 ~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~-~~i~~V~fv~~~~ 238 (560)
. .|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+++++ ..+++|+||++++
T Consensus 111 ~-----------~L~~~y~~~L~~a~~~~i~SIAfP~IgtG~~G~p~~~aa~i~~~~v~~fl~~~~~~~l~~V~fv~f~~ 179 (199)
T 3kh6_A 111 K-----------DVRKTVTSVLEECEQRKYTSVSLPAIGTGNAGKNPITVADNIIDAIVDFSSQHSTPSLKTVKVVIFQP 179 (199)
T ss_dssp S-----------CHHHHHHHHHHHHHHTTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHHHHHCSSCSCCEEEEEESST
T ss_pred H-----------HHHHHHHHHHHHHHHcCCCEEeecccccCCCCcCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEECCH
Confidence 4 399999999999999999999999999999999999999999999999999875 6789999999999
Q ss_pred hHHHHHHHHhhh
Q 008583 239 SDTEIYKRLLPL 250 (560)
Q Consensus 239 ~~~~~y~~~l~~ 250 (560)
+++++|++.|..
T Consensus 180 ~~~~~f~~~l~~ 191 (199)
T 3kh6_A 180 ELLNIFYDSMKK 191 (199)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999999876
No 9
>2dx6_A Hypothetical protein TTHA0132; conserved hypothetical protein, structural genomics, NPPSFA; 1.78A {Thermus thermophilus} PDB: 3v45_A
Probab=100.00 E-value=7.2e-39 Score=299.20 Aligned_cols=157 Identities=27% Similarity=0.394 Sum_probs=147.9
Q ss_pred CEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCCcc
Q 008583 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKY 161 (560)
Q Consensus 83 ~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~ 161 (560)
.+|++++|||+++++|||||++|+++.+|+| +++|++++|++|++||+++++|++|++++|++|+|+|+||||+|||.|
T Consensus 2 ~~i~i~~GDI~~~~~daIVnaaN~~l~~ggGv~~aI~~~~G~~l~~~c~~~g~~~~G~a~it~~~~L~~~~Vih~vgp~~ 81 (159)
T 2dx6_A 2 ARIRVVQGDITEFQGDAIVNAANNYLKLGAGVAGAILRKGGPSIQEECDRIGKIRVGEAAVTGAGNLPVRYVIHAAVLGD 81 (159)
T ss_dssp CEEEEEESCGGGCCSSEEEEEEETTCCCCSTTHHHHHHHHCTHHHHHHHHHCCCCTTCEEEEECTTSSSSEEEEEEEESS
T ss_pred eEEEEEECcCCcCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHhcCCCCCCcEEEecCCCCCCCEEEEEeCCCC
Confidence 3799999999999999999999999998876 599999999999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhHH
Q 008583 162 AVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDT 241 (560)
Q Consensus 162 ~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~~~~~~ 241 (560)
+ +. ..+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++| +++++|+||+++++++
T Consensus 82 ~-~~---~~~~L~~~~~~~L~~a~~~~~~sIa~P~igtG~~g~p~~~~a~i~~~~~~~~-----~~~~~V~~v~~~~~~~ 152 (159)
T 2dx6_A 82 E-PA---SLETVRKATKSALEKAVELGLKTVAFPLLGTGVGGLPVEAVARVMLEEIKKA-----PDTLEVTLYGYREEDA 152 (159)
T ss_dssp S-CC---CHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSTTCCCHHHHHHHHHHHHTTS-----CTTCEEEEEESSHHHH
T ss_pred C-Cc---hHHHHHHHHHHHHHHHHHcCCcEEEECCccCCCCCCCHHHHHHHHHHHHHhc-----CCCCEEEEEECCHHHH
Confidence 7 22 3679999999999999999999999999999999999999999999999999 4688999999999999
Q ss_pred HHHHHHh
Q 008583 242 EIYKRLL 248 (560)
Q Consensus 242 ~~y~~~l 248 (560)
++|+++|
T Consensus 153 ~~~~~~l 159 (159)
T 2dx6_A 153 EAIRRAL 159 (159)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9999864
No 10
>1vhu_A Hypothetical protein AF1521; structural genomics, unknown function; HET: MSE MES; 1.34A {Archaeoglobus fulgidus} SCOP: c.50.1.2 PDB: 2bfq_A* 1hjz_A* 2bfr_A*
Probab=100.00 E-value=7.3e-39 Score=311.69 Aligned_cols=166 Identities=19% Similarity=0.245 Sum_probs=154.3
Q ss_pred CCCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhC----hhHHHHHHH----hCC--CCCCCEEEeecCCCC
Q 008583 81 INSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAG----PGLAEECAT----LGG--CRTGMAKVTNAYDLP 149 (560)
Q Consensus 81 ~n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG----~~L~~e~~~----~~~--~~~G~~~vT~~~~L~ 149 (560)
++.+|.+++|||+++++|||||+||+.|.+|+| ++||+++|| ++|++||++ +++ |++|++++|++|+||
T Consensus 19 ~~~~i~i~~GDIt~~~vDaIVNaaN~~l~~ggGV~~aI~~aaG~~~~~~l~~ec~~~~~~~g~~~~~~G~a~iT~~~~L~ 98 (211)
T 1vhu_A 19 GDITLKLAQGDITQYPAKAIVNAANKRLEHGGGVAYAIAKACAGDAGLYTEISKKAMREQFGRDYIDHGEVVVTPAMNLE 98 (211)
T ss_dssp TTEEEEEEESCGGGSCCSEEEEEECTTCCCCSHHHHHHHHHHHSSHHHHHHHHHHHHHHHHSSSCCCTTCCEEEECGGGG
T ss_pred CCEEEEEEecccCcCCCCEEEECCCccccCccHHHHHHHHHhCCCchHHHHHHHHHHHHHcCCCcccCCcEEEEECCCCC
Confidence 467999999999999999999999999998876 589999999 999999988 688 999999999999999
Q ss_pred C---CeEEEEcCC----ccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHH
Q 008583 150 A---RRVIHTVGP----KYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLE 222 (560)
Q Consensus 150 ~---k~IIH~VgP----~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~ 222 (560)
| |||||+||| .|.. ...+.|++||++||++|.+++++|||||+||||++|||++++|++|++++++|+
T Consensus 99 ~~g~k~VIH~vgP~~~~~~~~----~~~~~L~~~y~~~L~~A~~~~i~SIAfP~IstG~~G~p~~~aa~i~~~~v~~~l- 173 (211)
T 1vhu_A 99 ERGIKYVFHTVGPICSGMWSE----ELKEKLYKAFLGPLEKAEEMGVESIAFPAVSAGIYGCDLEKVVETFLEAVKNFK- 173 (211)
T ss_dssp GGTCCEEEEEECCCCTTCCCH----HHHHHHHHHHHHHHHHHHHHTCCEEEECCTTSSTTCCCHHHHHHHHHHHHHHCC-
T ss_pred ccCcCEEEEecCCccccccCc----chHHHHHHHHHHHHHHHHHcCCCEEEeccccCCCCCCCHHHHHHHHHHHHHHHH-
Confidence 9 999999999 8843 456899999999999999999999999999999999999999999999999999
Q ss_pred HcCCCccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 223 KQKDKISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 223 ~~~~~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
++ + +++|+||++++.++++|+++|+.|+-
T Consensus 174 ~~-~-l~~V~~v~~~~~~~~~~~~~l~~~~~ 202 (211)
T 1vhu_A 174 GS-A-VKEVALVIYDRKSAEVALKVFERSLE 202 (211)
T ss_dssp CS-S-CCEEEEEESSHHHHHHHHHHHHHHC-
T ss_pred hC-C-CCEEEEEECCHHHHHHHHHHHHHhhc
Confidence 44 3 88999999999999999999987764
No 11
>3eti_A X (ADRP) domain, macro domain of non-structural protein 3; coronavirus, X domain, RNA binding protein; 2.20A {Feline infectious peritonitis virus} PDB: 3ew5_A* 3jzt_A*
Probab=100.00 E-value=4.3e-39 Score=301.61 Aligned_cols=150 Identities=18% Similarity=0.225 Sum_probs=139.0
Q ss_pred CCEEEEEEcCCcc----ccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEeecCCCCCCe
Q 008583 82 NSKIYLWRGNPWN----LEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNAYDLPARR 152 (560)
Q Consensus 82 n~~I~i~~GDI~~----~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT~~~~L~~k~ 152 (560)
..+|.+|+||||+ +++|||||+||++|.+||| ++||+++||++|++||+++ ++|++|++++|+|| |+|+|
T Consensus 9 ~~~i~l~~GDIt~~~~~~~vDaIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~iT~g~-l~~~~ 87 (168)
T 3eti_A 9 AGKVSFYQGDLDVLINFLEPDVLVNAANGDLRHVGGVARAIDVFTGGKLTKRSKEYLKSSKAIAPGNAVLFENV-LEHLS 87 (168)
T ss_dssp ETTEEEEESCHHHHHHHHCCSEEEEEECTTCCCCSTTHHHHHHHTTTHHHHHHHHHHTTSCCCCTTEEEEEEEE-ETTEE
T ss_pred CCeEEEEeCcccccCCCCCCCEEEeCCCcccCCCchHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCEEEecCC-CCccE
Confidence 3689999999999 8999999999999998876 5999999999999999986 89999999999999 99999
Q ss_pred EEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEE
Q 008583 153 VIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVV 232 (560)
Q Consensus 153 IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~ 232 (560)
|||||||.|... ..++.|++||++||++ .+|||||+||||++|||++++|++|++++++ ++|+
T Consensus 88 VIHtVgP~~~~~---~~~~~L~~~y~~~L~~-----~~SIAfP~IstG~~g~P~~~aa~i~~~~v~~---------~~V~ 150 (168)
T 3eti_A 88 VMNAVGPRNGDS---RVEGKLCNVYKAIAKC-----DGKILTPLISVGIFKVKLEVSLQCLLKTVTD---------RDLN 150 (168)
T ss_dssp EEEEECCCTTST---THHHHHHHHHHHHHTS-----CSCEEECCTTBSTTCBCHHHHHHHHHHHCCS---------SCEE
T ss_pred EEEecCCCCCcc---hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc---------CeEE
Confidence 999999999653 3468999999999985 4799999999999999999999999999987 5799
Q ss_pred EEecChhHHHHHHHHhh
Q 008583 233 FCTTTASDTEIYKRLLP 249 (560)
Q Consensus 233 fv~~~~~~~~~y~~~l~ 249 (560)
||+|+++++++|+++|.
T Consensus 151 ~v~f~~~~~~~~~~~l~ 167 (168)
T 3eti_A 151 VFVYTDQERVTIENFFN 167 (168)
T ss_dssp EEECCHHHHHHHHHHHH
T ss_pred EEEcCHHHHHHHHHHhc
Confidence 99999999999999874
No 12
>2acf_A Replicase polyprotein 1AB; ADRP domain, SARS NSP-3, APPR-1-P phosphatase, structural GE joint center for structural genomics, JCSG; 1.40A {Sars coronavirus TOR2} SCOP: c.50.1.2 PDB: 2fav_A*
Probab=100.00 E-value=8.4e-39 Score=303.64 Aligned_cols=163 Identities=17% Similarity=0.218 Sum_probs=145.2
Q ss_pred CCCCcccccCCCCEEEEEEcCCccc----cccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHH----hCCCCCCCEE
Q 008583 71 MVSRFPVDHEINSKIYLWRGNPWNL----EVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECAT----LGGCRTGMAK 141 (560)
Q Consensus 71 ~~~~f~~~~~~n~~I~i~~GDI~~~----~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~----~~~~~~G~~~ 141 (560)
+...|+....+|.+|.||+|||+++ ++|||||+||++|.+||| ++||+++||++|++||++ .++|++|+++
T Consensus 8 ~~~~~~~~~~~~~~i~i~~GDIt~~~~~~~vDAIVNaAN~~l~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~~G~a~ 87 (182)
T 2acf_A 8 PVNQFTGYLKLTDNVAIKCVDIVKEAQSANPMVIVNAANIHLKHGGGVAGALNKATNGAMQKESDDYIKLNGPLTVGGSC 87 (182)
T ss_dssp CSCCCCSCEECSSSEEEEESCHHHHHHHHCCSEEEEECCTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCCCCTTCEE
T ss_pred CccccccccccCCeEEEEeCcccccccCCCCCEEEECCCCCCCCCchHHHHHHHHhCHHHHHHHHHHHHHcCCCCCCcEE
Confidence 3456888999999999999999999 999999999999999887 589999999999999986 4899999999
Q ss_pred EeecCCCCCCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHH
Q 008583 142 VTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFL 221 (560)
Q Consensus 142 vT~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl 221 (560)
+|+||+|+ +||||+|||.|+.+. ..+.|++||+++ ++++|||||+||||++|||++++|++|++++++
T Consensus 88 iT~~~~L~-~~VIH~vgP~~~~~~---~~~~L~~~y~~~------~~~~SIAfP~IstGi~G~p~~~aa~i~~~~v~~-- 155 (182)
T 2acf_A 88 LLSGHNLA-KKCLHVVGPNLNAGE---DIQLLKAAYENF------NSQDILLAPLLSAGIFGAKPLQSLQVCVQTVRT-- 155 (182)
T ss_dssp EEECTTTC-SEEEEECCCCGGGTC---CTTHHHHHHHGG------GGSSEEEECCTTCGGGCCCHHHHHHHHHHHCCS--
T ss_pred EeeCCCCC-ceEEEECCCCCCCCc---hHHHHHHHHHHh------cCCCEEEECCcccCCCCCCHHHHHHHHHHHHhC--
Confidence 99999996 799999999997653 356899999996 799999999999999999999999999999975
Q ss_pred HHcCCCccEEEEEecChhHHHHHHHHhhhcCCCCh
Q 008583 222 EKQKDKISAVVFCTTTASDTEIYKRLLPLYFPRDK 256 (560)
Q Consensus 222 ~~~~~~i~~V~fv~~~~~~~~~y~~~l~~yfpr~~ 256 (560)
+|+||+++++ +|+++|+.||||..
T Consensus 156 --------~V~~v~~d~~---~y~~~l~~~~p~~~ 179 (182)
T 2acf_A 156 --------QVYIAVNDKA---LYEQVVMDYLDNLK 179 (182)
T ss_dssp --------EEEEEESCHH---HHHHHHHHHC----
T ss_pred --------cEEEEECCHH---HHHHHHHHhCCCCC
Confidence 7999999654 89999999999875
No 13
>3gpg_A NSP3, non-structural protein 3; macro domain, X domain, alphavirus, VIZI enzymes involved in replication, ATP-binding, cell membrane endosome; 1.65A {Chikungunya virus} PDB: 3gpo_A* 3gpq_A
Probab=100.00 E-value=1.2e-38 Score=298.13 Aligned_cols=155 Identities=15% Similarity=0.159 Sum_probs=141.2
Q ss_pred EEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCCccC
Q 008583 84 KIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYA 162 (560)
Q Consensus 84 ~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~~ 162 (560)
...||+||||++++|||||+||++|.+||| ++||+++||++++ .++|++|++++|+|+ ||||||||||.|+
T Consensus 11 ~~~~~~GDIt~~~vDAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----~~~~~~G~a~iT~~~---~k~VIHtVGP~~~ 82 (168)
T 3gpg_A 11 SYRVKRMDIAKNDEECVVNAANPRGLPGDGVCKAVYKKWPESFK-----NSATPVGTAKTVMCG---TYPVIHAVGPNFS 82 (168)
T ss_dssp CC-CEESCGGGCCSSCEEEECCTTCCCCSHHHHHHHHHCGGGGT-----TCCCCTTCEEEEEET---TEEEEEECCCCTT
T ss_pred ceEEEeCcCCcccCCEEEeCCCcccCCCchHHHHHHHHhhHHhh-----cCCCCCCCEEEecCC---CCEEEEeCCCCcC
Confidence 457899999999999999999999998887 4899999999873 689999999999994 9999999999999
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhHHH
Q 008583 163 VKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDTE 242 (560)
Q Consensus 163 ~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~~~~~~~ 242 (560)
.+...++.+.|++||++||++|.+++++|||||+||||++|||++++|+ +++++++|++. .+++|+||++++++++
T Consensus 83 ~~~~~~~~~~L~~~y~~~L~~A~~~~~~SIAfP~IstGi~g~P~~~aa~-ai~~v~~~~~~---~~~~V~fv~f~~~~~~ 158 (168)
T 3gpg_A 83 NYSESEGDRELAAAYREVAKEVTRLGVNSVAIPLLSTGVYSGGKDRLTQ-SLNHLFTAMDS---TDADVVIYCRDKEWEK 158 (168)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECTTSSTTSTTSCCHHH-HC-CHHHHHTT---CCSEEEEEESCHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhCCcEEEECccccCCCCCCHHHHHH-HHHHHHHhccC---CCCEEEEEECCHHHHH
Confidence 8876666789999999999999999999999999999999999999999 88999988754 4789999999999999
Q ss_pred HHHHHhhh
Q 008583 243 IYKRLLPL 250 (560)
Q Consensus 243 ~y~~~l~~ 250 (560)
+|+++|..
T Consensus 159 ~y~~~l~~ 166 (168)
T 3gpg_A 159 KISEAIQM 166 (168)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999864
No 14
>3gqe_A Non-structural protein 3; macro domain, X domain, venezuelan equine encephalitis virus alphavirus; HET: BCN; 2.30A {Venezuelan equine encephalitis virus} PDB: 3gqo_A*
Probab=100.00 E-value=1.3e-37 Score=291.44 Aligned_cols=157 Identities=16% Similarity=0.222 Sum_probs=143.4
Q ss_pred CCEEEEEEcCCccccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCCc
Q 008583 82 NSKIYLWRGNPWNLEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPK 160 (560)
Q Consensus 82 n~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~ 160 (560)
+.+|.+|+||||++++|||||+||+.|.+||| +++|++++|++++ .++|++|++++|++ +||||||+|||.
T Consensus 3 ~~~i~v~~GDIt~~~vDAIVNaAN~~l~~ggGV~~aI~~aaG~~l~-----~~~~~~G~a~iT~~---~~k~VIH~VgP~ 74 (168)
T 3gqe_A 3 APSYHVVRGDIATATEGVIINAANSKGQPGGGVCGALYKKFPESFD-----LQPIEVGKARLVKG---AAKHIIHAVGPN 74 (168)
T ss_dssp CCEEEEEESCGGGCCSSEEEEEECTTSCCTTGGGSHHHHHCGGGCC-----CCCCCTTCEEEECC---TTCCEEEEECCC
T ss_pred CCeEEEEeCcccCcccCEEEeCCCcccCCCccHHHHHHHHhhHHhc-----CCCcCCCcEEEEcC---CCCEEEEcCCCc
Confidence 67999999999999999999999999998876 5899999999874 68999999999998 499999999999
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhH
Q 008583 161 YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASD 240 (560)
Q Consensus 161 ~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~~~~~ 240 (560)
|+.+...++.+.|++||++||++|.+++++|||||+||||++|||++++|+ ++++|++..++++.+|+||++++++
T Consensus 75 ~~~~~~~~~~~~L~~~y~~~L~~a~~~~~~SIAfP~IstG~~g~p~~~aa~----~i~~~l~~~~~~~~~V~iv~fd~~~ 150 (168)
T 3gqe_A 75 FNKVSEVEGDKQLAEAYESIAKIVNDNNYKSVAIPLLSTGIFSGNKDRLTQ----SLNHLLTALDTTDADVAIYCRDKKW 150 (168)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTSSTTSCSSCCHHH----HHHHHHHHHTTSCCEEEEEESCHHH
T ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCHHHHHH----HHHHHHHHCCCCCCeEEEEEcCHHH
Confidence 998876666789999999999999999999999999999999999999998 4466777777778899999999999
Q ss_pred HHHHHHHhhh
Q 008583 241 TEIYKRLLPL 250 (560)
Q Consensus 241 ~~~y~~~l~~ 250 (560)
++.|++++.+
T Consensus 151 ~~~~~~~~~~ 160 (168)
T 3gqe_A 151 EMTLKEAVAR 160 (168)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999998764
No 15
>3ejg_A Non-structural protein 3; HCOV 229E, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting, RNA-binding; 1.78A {Human coronavirus 229E} PDB: 3ewr_A* 3ewq_A*
Probab=100.00 E-value=4.2e-37 Score=292.82 Aligned_cols=148 Identities=16% Similarity=0.229 Sum_probs=137.0
Q ss_pred CCCEEEEEEcCCcc----ccccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCCCEEEeecCCCCCC
Q 008583 81 INSKIYLWRGNPWN----LEVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTGMAKVTNAYDLPAR 151 (560)
Q Consensus 81 ~n~~I~i~~GDI~~----~~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT~~~~L~~k 151 (560)
.+.+|.+|+|||++ +++|||||+||++|.+||| ++||+++||++|++||+++ ++|++|++++|+||+|
T Consensus 36 ~~~~i~l~~GDIt~~~~~~~vDAIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~l~~~~g~~~~G~a~iT~~~~L--- 112 (193)
T 3ejg_A 36 VHDNVAFYQGDVDTVVNGVDFDFIVNAANENLAHGGGLAKALDVYTKGKLQRLSKEHIGLAGKVKVGTGVMVECDSL--- 112 (193)
T ss_dssp EETTEEEEECCHHHHHHHCCCSEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCSCCTTCEEEEEETTE---
T ss_pred CCCeEEEEeCcccccCcCCCcCEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHHcCCCCCCCEEEecCCCe---
Confidence 67899999999999 8999999999999998887 4899999999999999875 8999999999999999
Q ss_pred eEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEE
Q 008583 152 RVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAV 231 (560)
Q Consensus 152 ~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V 231 (560)
||||||||.|.. ..++.|++||++||+. .+|||||+||||++|||++++|++|++++++ .+|
T Consensus 113 ~VIHtVGP~~~~----~~~~~L~~~y~~~L~~-----~~SIAfPaIstGi~G~P~~~aa~ial~~v~~---------~~V 174 (193)
T 3ejg_A 113 RIFNVVGPRKGK----HERDLLIKAYNTINNE-----QGTPLTPILSCGIFGIKLETSLEVLLDVCNT---------KEV 174 (193)
T ss_dssp EEEEEECCCSST----THHHHHHHHHHHHHHS-----SSCEEECCTTCGGGCCCHHHHHHHHHHHCCS---------SCE
T ss_pred eEEEecCCCCCc----hHHHHHHHHHHHHHHh-----cCceeecccccCCCCCCHHHHHHHHHHHHhc---------CeE
Confidence 999999999964 3568999999999983 3799999999999999999999999999987 379
Q ss_pred EEEecChhHHHHHHHHhh
Q 008583 232 VFCTTTASDTEIYKRLLP 249 (560)
Q Consensus 232 ~fv~~~~~~~~~y~~~l~ 249 (560)
+||+|+++++++|+++|.
T Consensus 175 ~fv~f~~~~~~~~~~~l~ 192 (193)
T 3ejg_A 175 KVFVYTDTEVCKVKDFVS 192 (193)
T ss_dssp EEEECSHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHhc
Confidence 999999999999999874
No 16
>2vri_A Non-structural protein 3; RNA replication, nucleotide-binding, endonuclease, macro domain, viral protein, ATP-binding, exonuclease; 1.8A {Human coronavirus NL63}
Probab=100.00 E-value=1.3e-35 Score=280.35 Aligned_cols=157 Identities=17% Similarity=0.198 Sum_probs=140.8
Q ss_pred CCCCCCCcccccCCCCEEEEEEcCCccc----cccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHh----CCCCCC
Q 008583 68 GNGMVSRFPVDHEINSKIYLWRGNPWNL----EVDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATL----GGCRTG 138 (560)
Q Consensus 68 ~~~~~~~f~~~~~~n~~I~i~~GDI~~~----~vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~----~~~~~G 138 (560)
|.....+|.. +.+|.+++|||+++ ++|||||+||++|.+||| ++||++++|++|++||+++ ++|++|
T Consensus 6 ~~~~~~pf~~----~~~i~i~~GDIt~~~~~~~~DaIVNaaN~~l~~ggGv~~AI~~aaG~~l~~ec~~~~~~~g~~~~G 81 (174)
T 2vri_A 6 AAPFTKPFAV----YKNVKFYLGDISHLVNCVSFDFVVNAANENLLHGGGVARAIDILTEGQLQSLSKDYISSNGPLKVG 81 (174)
T ss_dssp TTEECCCSEE----ETTEEEEESCHHHHTTTSCCSEEEEEECTTCCCCSHHHHHHHHHTTTHHHHHHHHHHHHHCSCCTT
T ss_pred CCCcCCccCC----CCeEEEEeccccccccCCCccEEEECCCccCCCCCcHhHHHHHHhhHHHHHHHHHHHHhcCCCCCC
Confidence 3445566765 67899999999999 999999999999998887 5899999999999999874 899999
Q ss_pred CEEEeecCCCCCCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHH
Q 008583 139 MAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVR 218 (560)
Q Consensus 139 ~~~vT~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~ 218 (560)
++++|++++| ||||+|||.|... ..+.|++||++||++ + +|||||+||||++|||++++|++|+++++
T Consensus 82 ~a~iT~~~~l---~VIH~vgP~~~~~----~~~~L~~~y~~~L~~---~--~SIAfP~IstG~~g~p~~~aa~i~~~~v~ 149 (174)
T 2vri_A 82 AGVMLECEKF---NVFNVVGPRTGKH----EHSLLVEAYNSILFE---N--GIPLMPLLSCGIFGVRIENSLKALFSCDI 149 (174)
T ss_dssp CEEEEECSSC---EEEEEECCCSSTT----HHHHHHHHHHHHHHS---S--SCEEEECSSCGGGCCCHHHHHHHHHTSCC
T ss_pred eEEEEECCCC---EEEEEcCCCCCcc----hHHHHHHHHHHHHhh---C--CcEEeCccccCCCCCCHHHHHHHHHHHHh
Confidence 9999999998 9999999999532 568999999999985 3 49999999999999999999999999987
Q ss_pred HHHHHcCCCccEEEEEecChhHHHHHHHHhh
Q 008583 219 RFLEKQKDKISAVVFCTTTASDTEIYKRLLP 249 (560)
Q Consensus 219 ~fl~~~~~~i~~V~fv~~~~~~~~~y~~~l~ 249 (560)
+ ++|+|++|+++++++|+++|+
T Consensus 150 ~---------~~V~~v~f~~~~~~~~~~~l~ 171 (174)
T 2vri_A 150 N---------KPLQVFVYSSNEEQAVLKFLD 171 (174)
T ss_dssp C---------SCEEEEECSHHHHHHHHHHHH
T ss_pred h---------CcEEEEEcCHHHHHHHHHHHh
Confidence 6 579999999999999999884
No 17
>3ejf_A Non-structural protein 3; IBV, coronavirus, X-domain, macro domain, NSP3, ADRP, hydrolase, ribosomal frameshifting; 1.60A {Avian infectious bronchitis virus} PDB: 3eke_A* 3ewo_A 3ewp_A*
Probab=100.00 E-value=1.1e-34 Score=272.83 Aligned_cols=155 Identities=13% Similarity=0.156 Sum_probs=133.5
Q ss_pred cccCCCCEEEEEEcCCcccccc--------EEEEcCCcCCCCCCch-HHHHHhhChhHHHHHHHh----CCCCCCCEEEe
Q 008583 77 VDHEINSKIYLWRGNPWNLEVD--------TVVNSTNENLDEAHSS-PGLHAAAGPGLAEECATL----GGCRTGMAKVT 143 (560)
Q Consensus 77 ~~~~~n~~I~i~~GDI~~~~vD--------aIVN~aN~~l~~~~~~-~aI~~~aG~~L~~e~~~~----~~~~~G~~~vT 143 (560)
.....+.+|++|+||||++++| ||||+||++|.++||+ +||+++||++|++||+++ |+|+ +++|
T Consensus 8 ~~~~~~~~i~v~~GDIt~~~vDa~~~~~~DaIVNaAN~~L~~ggGV~~AI~~aaG~~l~~ec~~~~~~~g~~~---a~iT 84 (176)
T 3ejf_A 8 CEKPKFLEYKTCVGDLTVVIAKALDEFKEFCIVNAANEHMTHGSGVAKAIADFCGLDFVEYCEDYVKKHGPQQ---RLVT 84 (176)
T ss_dssp --CCSSCEEEEEESCHHHHHHHHHHHHSSEEEEEECCTTCCCCSHHHHHHHHHHCHHHHHHHHHHHHHHCCCS---EEEE
T ss_pred ccCCCCceEEEEeeeCeEEeecccccCCCCEEEeCCCcccCCCchHHHHHHHHhhHHHHHHHHHHHHhcCCCC---eeec
Confidence 4456789999999999999765 5999999999988874 899999999999999886 7887 9999
Q ss_pred ecCCCCCCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008583 144 NAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (560)
Q Consensus 144 ~~~~L~~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~ 223 (560)
.|++|++++|||||||.|..+ ..+++|++||++||+ ++++|||||+||||++|||++++|++|+++++.
T Consensus 85 ~G~~l~t~~VIHtVGP~~~~~---~~~~~L~~~y~~~L~----~~~~SIAfPaIstGi~g~P~~~aA~ia~~~v~~---- 153 (176)
T 3ejf_A 85 PSFVKGIQCVNNVVGPRHGDN---NLHEKLVAAYKNVLV----DGVVNYVVPVLSLGIFGVDFKMSIDAMREAFEG---- 153 (176)
T ss_dssp CCCSTTEEEEEEECCCCTTCS---CHHHHHHHHHHTTCC----TTCCEEEEECCCTTSTTCCHHHHHHHHHHHHTT----
T ss_pred ccccccCCEEEEeCCCCCCCc---cHHHHHHHHHHHHHH----cCCcEEEECccccCCCCCCHHHHHHHHHHHhhh----
Confidence 999999999999999999653 246799999999998 999999999999999999999999999999983
Q ss_pred cCCCccEEEEEecChhHHHHHHHHh
Q 008583 224 QKDKISAVVFCTTTASDTEIYKRLL 248 (560)
Q Consensus 224 ~~~~i~~V~fv~~~~~~~~~y~~~l 248 (560)
..-+|++..+|.+.+++|+.++
T Consensus 154 ---~~v~v~~~~~D~e~~~~~~~~~ 175 (176)
T 3ejf_A 154 ---CTIRVLLFSLSQEHIDYFDVTC 175 (176)
T ss_dssp ---CCCEEEEEESCHHHHHHHHHTC
T ss_pred ---cceEEEEEcCCHHHHHHHHHHh
Confidence 1224555555678888888764
No 18
>1njr_A 32.1 kDa protein in ADH3-RCA1 intergenic region; structural genomics, dimer, two domain organization, PSI, PR structure initiative; HET: XYL; 1.90A {Saccharomyces cerevisiae} SCOP: c.50.1.2 PDB: 1txz_A* 1ty8_A*
Probab=100.00 E-value=5e-35 Score=294.78 Aligned_cols=173 Identities=11% Similarity=0.054 Sum_probs=148.4
Q ss_pred CCEEEEEEcCCccc-------------cccEEEEcCCcCCCCCCch-HHHHHhhC-hhHHHHHHHh---CCCCCCCEEEe
Q 008583 82 NSKIYLWRGNPWNL-------------EVDTVVNSTNENLDEAHSS-PGLHAAAG-PGLAEECATL---GGCRTGMAKVT 143 (560)
Q Consensus 82 n~~I~i~~GDI~~~-------------~vDaIVN~aN~~l~~~~~~-~aI~~~aG-~~L~~e~~~~---~~~~~G~~~vT 143 (560)
+.+|.|++|||+++ ++|||||+||+.+.+|||+ +||+++|| +.+++||+++ |.|++|++++|
T Consensus 44 ~~~i~i~~GDIt~l~~~~~~~~~~~~~~vDAIVNaANs~l~~gGGVd~AI~raaGg~~l~~ec~~~~~~g~~~~G~a~iT 123 (284)
T 1njr_A 44 DKYLCIHHGHLQSLMDSMRKGDAIHHGHSYAIVSPGNSYGYLGGGFDKALYNYFGGKPFETWFRNQLGGRYHTVGSATVV 123 (284)
T ss_dssp -CCEEEEESCHHHHHHHHHTTCC----CCEEEEECCBTTCCCCSSHHHHHHHHHTSHHHHHHHHHHTTTSCCCTTCCEEE
T ss_pred CCEEEEEeCCHhhhhhhccccccccCCCccEEEeCCCCCCCCCchHHHHHHHhhCcHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 56899999999999 8999999999999988875 89999975 7789999884 78999999999
Q ss_pred ecC----------CCCCCeEEEEcCCccCCCC--ch-----hHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCCh
Q 008583 144 NAY----------DLPARRVIHTVGPKYAVKY--HT-----AAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPR 206 (560)
Q Consensus 144 ~~~----------~L~~k~IIH~VgP~~~~~~--~~-----~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~ 206 (560)
++| +|+||||||||||.|..+. .+ ...+.|++||++||+.| +++++|||||+||||++|||+
T Consensus 124 ~~~~~~~~~~~~~~L~~k~VIHtvgp~~~~~~~~d~~~p~~~~~~~L~~~~~~~L~~a-e~~i~SIAfPaIsTGv~G~P~ 202 (284)
T 1njr_A 124 DLQRCLEEKTIECRDGIRYIIHVPTVVAPSAPIFNPQNPLKTGFEPVFNAMWNALMHS-PKDIDGLIIPGLCTGYAGVPP 202 (284)
T ss_dssp EGGGGGCC----CCTTEEEEEECCCBSCSSSCSCCTTCHHHHTHHHHHHHHHHHHHTS-CTTCSEEEECCTTCSTTCCCH
T ss_pred ECCcccccccchhcCCCCEEEEeCCCccCCCCCcccccccccHHHHHHHHHHHHHHHH-HhCCCEEEECcccccCCCCCH
Confidence 999 9999999999999997652 11 23578999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCCCChhHHHHHh
Q 008583 207 EPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPRDKHEEEVAI 263 (560)
Q Consensus 207 ~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfpr~~~e~~~~~ 263 (560)
+++|++|+++++.|+++++. .++.|+||.+ +.+ ...|++++..||..++
T Consensus 203 ~~aA~i~~~av~~f~~~~~~s~~~~~~vi~~~~-~~~-------~~~~~~~~~~ee~~~~ 254 (284)
T 1njr_A 203 IISCKSMAFALRLYMAGDHISKELKNVLIMYYL-QYP-------FEPFFPESCKIECQKL 254 (284)
T ss_dssp HHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHT-TCC-------CGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcccccceEEEEEEC-HHH-------HHHHHhhhHHHHHHHh
Confidence 99999999999999987652 2345666655 444 4568998888887665
No 19
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=99.97 E-value=7e-32 Score=284.59 Aligned_cols=155 Identities=19% Similarity=0.251 Sum_probs=140.9
Q ss_pred CEEEEEEcCCccccccEEEEcCCcCCCCCCch-HHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcCCcc
Q 008583 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHSS-PGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKY 161 (560)
Q Consensus 83 ~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~~-~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~VgP~~ 161 (560)
..+.|++||||+.++|||||+||++|..|||+ +|||++||+++.+ +.|++|++++|.|| +|||||||||.|
T Consensus 344 PsfrIIRgDITk~~vDAIVNAANtsL~gGgGVdGAIhraaG~~ll~-----~~~~tG~AkIT~g~---aKyIIHtVGPvw 415 (670)
T 4gua_A 344 PSYRTKRENIADCQEEAVVNAANPLGRPGEGVCRAIYKRWPTSFTD-----SATETGTARMTVCL---GKKVIHAVGPDF 415 (670)
T ss_dssp CCEEEECSCGGGCCSSEEEEECCTTCCCCSSHHHHHHHHCGGGGTT-----CCCCTTCEEEEEET---TEEEEEECCCCT
T ss_pred cceeEEeccccccccCEEEeCCCCCCCCcCCHhHHHHHHhhHHHhc-----CCCCcceEEEecCC---CceEEEcCCCCc
Confidence 35679999999999999999999999998875 9999999999864 58999999999999 699999999999
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecChhHH
Q 008583 162 AVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTASDT 241 (560)
Q Consensus 162 ~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~~~~~~ 241 (560)
+++...+..++|++||+++|++|.+++++|||||+||||+||||++ .++++++++..||+.+. -.|+|+++|.+..
T Consensus 416 ~~g~~~E~~~lLascYrnsLkLA~e~~~kSIAFPLISTGIYG~PKd-al~IAl~~I~~fL~~~D---~dV~IvcfDKkwe 491 (670)
T 4gua_A 416 RKHPEAEALKLLQNAYHAVADLVNEHNIKSVAIPLLSTGIYAAGKD-RLEVSLNCLTTALDRTD---ADVTIYCLDKKWK 491 (670)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHHHHHTTCSEEEECCTTSSSTTTTSC-CHHHHHHHHHHHHTTSS---CEEEEECSCHHHH
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHcCCcEEEEccccccCCCCCHH-HHHHHHHHHHHHHhccC---CEEEEEEecChHH
Confidence 9988777668999999999999999999999999999999999987 58999999999998764 3799999998777
Q ss_pred HHHHHHhh
Q 008583 242 EIYKRLLP 249 (560)
Q Consensus 242 ~~y~~~l~ 249 (560)
..+++.+.
T Consensus 492 ~~Ik~ai~ 499 (670)
T 4gua_A 492 ERIDAALQ 499 (670)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78887776
No 20
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=99.97 E-value=1.6e-30 Score=260.28 Aligned_cols=157 Identities=17% Similarity=0.267 Sum_probs=150.5
Q ss_pred CCChHHHHhcCceEEcccCCCCCeEEEEEcccccCCCCCHHHHHHHHHHHhhhhcCCCEEEEEEcCCCCCCCCCCHHHHH
Q 008583 386 SLNLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMR 465 (560)
Q Consensus 386 ~~dl~~i~~~g~~y~~G~D~~GrpViv~~~~~~d~~~~d~e~ll~~~i~~le~~~~~~yviV~D~tg~s~~~~~~l~~lk 465 (560)
.+|+++|+++++||++|.|++||||||++++++++...|+|.+++|+++++++++.++|++|||||+++..+.|+++|++
T Consensus 1 ~ed~~~i~~~~ify~~G~d~dGrpViv~~~~~l~~~~~D~e~Ll~~vl~tl~~~~~~~y~lV~d~T~~~~~n~p~~~wl~ 80 (256)
T 3pg7_A 1 KEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDLTHTGPSNRFKTDFLS 80 (256)
T ss_dssp CTTTTTHHHHTSEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTTTTSCEEEEEECTTCCGGGCCCHHHHH
T ss_pred CcchhHHHHcCCEEEcCcCCCCCEEEEEEeecCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEECCCCCcccCCcHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhHhhccccEEEEEcCChhHHHHHHHh-hhcccccccceEEEECCHhHHhccCCCCCCCCChhHHHHHHhhc
Q 008583 466 RLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTL-QLLVDNVVWKKVVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVN 542 (560)
Q Consensus 466 k~~~~l~~~~p~rLk~iyivnp~~~~k~~~~~~-~~fls~K~~~KI~~~~sleeL~~~I~~eqL~iP~~v~~~d~~l~ 542 (560)
++++++|+.+++||+++||||||+|++.+++.+ ++|.+.|+++|++|++++++|.++|++++|.||+.|.++|++++
T Consensus 81 ~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~sl~eL~~~i~~~~L~LP~~t~~~~~d~r 158 (256)
T 3pg7_A 81 KWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHIEHEQQKLPAATLALEEDLK 158 (256)
T ss_dssp HTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESSTTGGGGTSCGGGCCCCHHHHHTTSSCE
T ss_pred HHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECCHHHHHhhcCHHHcCCChHHHhhcccce
Confidence 999999999999999999999999999887776 66777799999999999999999999999999999999999765
No 21
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=99.94 E-value=2e-27 Score=241.25 Aligned_cols=164 Identities=17% Similarity=0.266 Sum_probs=124.2
Q ss_pred hHHHHHHHHHhcCC---ChHHHHhcCceEEcccCCCCCeEEEEEcccccCCCCCHHHHHHHHHHHhhhhcCCCEEEEEEc
Q 008583 374 YSLHSRYLAKANSL---NLSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFH 450 (560)
Q Consensus 374 ~~~~~~~lr~a~~~---dl~~i~~~g~~y~~G~D~~GrpViv~~~~~~d~~~~d~e~ll~~~i~~le~~~~~~yviV~D~ 450 (560)
.+.|++||+|++.+ ++++|+..++||++|.|++||||||+++++++...+|+|.+++|+++++++++.++|++||||
T Consensus 5 ~~~~~efM~r~~~~~~e~~~~i~~~~~f~~~g~d~dG~PViv~~~~~~~~~~~D~e~Lly~il~tl~~~~~~~y~lV~D~ 84 (290)
T 3peg_A 5 SSKFEEFMTRHQVHEKEEFKALKTLSIFYQAGTSKAGNPIFYYVARRFKTGQINGDLLIYHVLLTLKPYYAKPYEIVVDL 84 (290)
T ss_dssp -------------------CCGGGTTTEEEEEECTTSCEEEEEEGGGCCBTTBCHHHHHHHHHHHHTTTTTSCEEEEEEC
T ss_pred hHHHHHHHHHhhccChhhhhhhhcCCeEEEeccCCCCCEEEEEEeecCCccCCCHHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 45679999999854 566677999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhHhhccccEEEEEcCChhHHHHHH-HhhhcccccccceEEEECCHhHHhccCCCCCCC
Q 008583 451 SAASLQLQPDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIF-TLQLLVDNVVWKKVVYVDRLLQLFRYVPREQLT 529 (560)
Q Consensus 451 tg~s~~~~~~l~~lkk~~~~l~~~~p~rLk~iyivnp~~~~k~~~~-~~~~fls~K~~~KI~~~~sleeL~~~I~~eqL~ 529 (560)
|+++..+.|+..|++++++++|+.+++||+++||+|||+||+.+++ ++++|.+.|..+|++|++++.+|.++++.+++.
T Consensus 85 T~~~~~n~p~~~~l~~~~~llp~~~~kNl~~~Yi~np~~~f~~~~k~~~~~~~~~k~~~k~v~~~~~~~L~~~i~~~~~~ 164 (290)
T 3peg_A 85 THTGPSNRFKTDFLSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDCPGKLAEHIEHEQQK 164 (290)
T ss_dssp TTCCGGGCCCHHHHGGGGTSSCHHHHHTEEEEEEESCCHHHHHHHHHTTTTGGGGTTCTTEEEESSSCC-----------
T ss_pred CCCCccCCChHHHHHHHHHHCCHHHHhhccEEEEECCCHHHHHHHHHHHhhhhhhhcCceEEEcCCHHHHHhhCCHHHhc
Confidence 9999999999999999999999999999999999999999999875 668888899999999999999999999999888
Q ss_pred CChhHHHH
Q 008583 530 IPDFVFQH 537 (560)
Q Consensus 530 iP~~v~~~ 537 (560)
+|+.++.+
T Consensus 165 lp~~~~~~ 172 (290)
T 3peg_A 165 LPAATLAL 172 (290)
T ss_dssp --------
T ss_pred Cccccchh
Confidence 86654443
No 22
>2jyc_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, BC011709, protein structure initiative, PSI-2; NMR {Homo sapiens} PDB: 2lgr_A
Probab=99.92 E-value=1.4e-24 Score=202.16 Aligned_cols=130 Identities=15% Similarity=0.161 Sum_probs=115.0
Q ss_pred CCCEEEEEEcCCcccc-ccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcC
Q 008583 81 INSKIYLWRGNPWNLE-VDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVG 158 (560)
Q Consensus 81 ~n~~I~i~~GDI~~~~-vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~Vg 158 (560)
.+.+|++++|||++.+ +|||||++|+++.+|+| +++|++++| ++ .||.+ ++|++|++++|.++ ++||||+||
T Consensus 18 ~~~~i~~v~GDIt~~~~~daIVnaaN~~~~~GgGVa~ai~~~~p-~~-~e~~~-~~~~~G~a~it~~~---~~~Vih~vg 91 (160)
T 2jyc_A 18 EGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFG-GV-QELLN-QQKKSGEVAVLKRD---GRYIYYLIT 91 (160)
T ss_dssp CSCSEEEEESCSSSSCSSCEEEEEECTTCCCCSSTHHHHHHHHC-CH-HHHHH-HCCCTTCEEEEEET---TEEEEEEEC
T ss_pred CCceEEEEeCcCCCCCCCCEEEEccCCcCCCCCcHHHHHHHHCh-HH-HHHhc-cCCCCCcEEEEecC---CcEEEEEec
Confidence 3678999999999998 79999999999998876 589999995 45 68876 68999999999985 699999999
Q ss_pred Cc-cCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHH
Q 008583 159 PK-YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRR 219 (560)
Q Consensus 159 P~-~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~ 219 (560)
|. |.... ..+.|++||+++++.|.+++++|||||+||||++|+|+++++++|.+++.+
T Consensus 92 ~~~~~~~~---~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtGi~G~p~~~v~~ii~~~~~~ 150 (160)
T 2jyc_A 92 KKRASHKP---TYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA 150 (160)
T ss_dssp SSSTTSCC---CHHHHHHHHHHHHHHHHHHTCCEEEEESCCSSCSSSCHHHHHHHHHHHHTT
T ss_pred CCCCCCCC---hHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHhh
Confidence 98 65422 257899999999999999999999999999999999999999999887654
No 23
>2eee_A Uncharacterized protein C6ORF130; macro domain, A1PP domain, ADP-ribose binding, rossmann fold, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2l8r_A*
Probab=99.92 E-value=1.3e-24 Score=200.36 Aligned_cols=130 Identities=14% Similarity=0.135 Sum_probs=114.2
Q ss_pred CCCEEEEEEcCCcccc-ccEEEEcCCcCCCCCCc-hHHHHHhhChhHHHHHHHhCCCCCCCEEEeecCCCCCCeEEEEcC
Q 008583 81 INSKIYLWRGNPWNLE-VDTVVNSTNENLDEAHS-SPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVG 158 (560)
Q Consensus 81 ~n~~I~i~~GDI~~~~-vDaIVN~aN~~l~~~~~-~~aI~~~aG~~L~~e~~~~~~~~~G~~~vT~~~~L~~k~IIH~Vg 158 (560)
.+.+|++++|||++.+ +|||||++|.++.+|+| +++|++++ |++ .||.+ +.+++|++++|.++ ++||||++|
T Consensus 7 ~~~~i~~v~GDIt~~~~~daIVnaaN~~~~~G~Gva~ai~~~~-p~~-~~~~~-~~~~~G~a~it~~~---~~~Vih~v~ 80 (149)
T 2eee_A 7 GGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKF-GGV-QELLN-QQKKSGEVAVLKRD---GRYIYYLIT 80 (149)
T ss_dssp SSCCCEEECSCSSSSCSSCEEEEEEETTCCCCSTTHHHHHHHT-CCH-HHHHT-TCCCTTCEEEEESS---SSEEEEEEE
T ss_pred CCeeEEEEecccccCCCCcEEEEEeCCCCCcCCcHHHHHHHHC-cHH-HHHhc-ccCCCccEEEEEcC---CCEEEEEEe
Confidence 4678999999999998 79999999999998876 58998888 555 67776 68999999999985 799999999
Q ss_pred Cc-cCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHH
Q 008583 159 PK-YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRR 219 (560)
Q Consensus 159 P~-~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~ 219 (560)
|. |.... ..+.|++||+++|+.|.+++++|||||+||||++|+|+++++++|.+++.+
T Consensus 81 ~~~~~~~~---~~~~l~~~l~~~l~~a~~~~~~sIa~P~IgtG~~G~~~~~v~~ii~~~~~~ 139 (149)
T 2eee_A 81 KKRASHKP---TYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVFEA 139 (149)
T ss_dssp ESSTTSCC---CHHHHHHHHHHHHHHHHHHTCCEEECCCCCCTTTTCCHHHHHHHHHHHHTT
T ss_pred cCCCCCCC---CHHHHHHHHHHHHHHHHHcCCCEEEeCCCCCCCCCCCHHHHHHHHHHHhcc
Confidence 98 65422 257899999999999999999999999999999999999999998887653
No 24
>2fg1_A Conserved hypothetical protein BT1257; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.25A {Bacteroides thetaiotaomicron} SCOP: c.50.1.2 PDB: 2afc_A
Probab=99.89 E-value=6.9e-23 Score=190.74 Aligned_cols=132 Identities=13% Similarity=0.058 Sum_probs=112.6
Q ss_pred CEEEEEEcCCcc---ccccEEEEcCCcCCCCCCch-HHHHHhhChhHHHHHH----HhCCCCCCCEEEeecCCCCCCeEE
Q 008583 83 SKIYLWRGNPWN---LEVDTVVNSTNENLDEAHSS-PGLHAAAGPGLAEECA----TLGGCRTGMAKVTNAYDLPARRVI 154 (560)
Q Consensus 83 ~~I~i~~GDI~~---~~vDaIVN~aN~~l~~~~~~-~aI~~~aG~~L~~e~~----~~~~~~~G~~~vT~~~~L~~k~II 154 (560)
..|.+++|||++ .++|||||++|..+.+|+|+ .+|++++ |++.++|+ +.+.+++|++++|+++ ..+|||
T Consensus 4 M~i~~v~GDit~~~~~~~daIvn~~N~~~~~G~Gva~ai~~~~-p~~~~~~~~~~~~~~~~~~G~~~i~~~~--~~~~Vi 80 (158)
T 2fg1_A 4 MEILYIKGDATAPIGSGVKVITHICNDIGGWGKGFVLALSKKW-KMPEEAYRQWYKSQEEFTLGAVQFVNVE--NKLYVA 80 (158)
T ss_dssp CCCEEEESCTTSCCSSSCEEEEEEEETTCCCCSTHHHHHHHHC-SHHHHHHHHHHHHTSSCSTTCEEEEEEE--TTEEEE
T ss_pred eEEEEEecccCCCCCCCCeEEEEEecCCCCcCccHHHHHHHHC-ChHHHHHHHHHhhccCcCCccEEEEecC--CCeEEE
Confidence 479999999999 88999999999999988874 8998888 78877754 4679999999999984 249999
Q ss_pred EEcCCc-cCCCCch---hHHHHHHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHH
Q 008583 155 HTVGPK-YAVKYHT---AAENALSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVR 218 (560)
Q Consensus 155 H~VgP~-~~~~~~~---~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~ 218 (560)
|++||. |..+... ...+.|++||+++++.|.+++. |||||.||||++|+|++++++++.+++.
T Consensus 81 ~~v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~a~~~~~-sIa~P~Ig~G~~G~~w~~v~~ii~~~l~ 147 (158)
T 2fg1_A 81 NMIGQHGIYKDSKGLPPIRYDAVRQCLKEVALFTIAHKA-SVHMPRIGCGLAGGKWELMEQIIKEELI 147 (158)
T ss_dssp EEEEESSSSCCTTCCCSBCHHHHHHHHHHHHHHHHHHTC-EEEECCTTCSTTCCCHHHHHHHHHHHTG
T ss_pred EEEEEcccCCCCCCCccccHHHHHHHHHHHHHHHHHhCC-eEEecCcCCCCCCCCHHHHHHHHHHHhc
Confidence 999998 7543311 2467899999999999999997 9999999999999999999988766654
No 25
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=99.84 E-value=3.1e-21 Score=199.21 Aligned_cols=141 Identities=14% Similarity=0.179 Sum_probs=128.0
Q ss_pred hHHHHhcCceE-EcccCCCCCeEEEEEcccccCCCCCHHHHHHHHHHHhhhhcCC------CEEEEEEcCCCCCCC--CC
Q 008583 389 LSEIAEMKIVY-RGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQK------PYSIVYFHSAASLQL--QP 459 (560)
Q Consensus 389 l~~i~~~g~~y-~~G~D~~GrpViv~~~~~~d~~~~d~e~ll~~~i~~le~~~~~------~yviV~D~tg~s~~~--~~ 459 (560)
+.++.+.|+++ ..|+|++||||+++++++++++.++.+++++++++++|..+.. .+++|+|++|+++.+ .+
T Consensus 135 i~~~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~lE~~l~~~~~~v~g~v~IiD~~g~sl~~~~~~ 214 (316)
T 3hx3_A 135 VRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQQAASL 214 (316)
T ss_dssp HHHHHHTTSSEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHC
T ss_pred HHHHHHcCCccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHHHHHHHhcccCCcceEEEEEECCCCCHHHhccC
Confidence 44556778865 4599999999999999999999999999999999999987753 599999999999873 46
Q ss_pred CHHHHHHHHHHHhhHhhccccEEEEEcCChhHHHHHHHhhhcccccccceEEEE-CCHhHHhccCCCCCCC
Q 008583 460 DLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNVVWKKVVYV-DRLLQLFRYVPREQLT 529 (560)
Q Consensus 460 ~l~~lkk~~~~l~~~~p~rLk~iyivnp~~~~k~~~~~~~~fls~K~~~KI~~~-~sleeL~~~I~~eqL~ 529 (560)
+++++|+++.+++++||+||+.+||||+|++|.++|++++||+++|+++||+++ +++++|.++||+++|+
T Consensus 215 ~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~~~~L~~~I~~~~LP 285 (316)
T 3hx3_A 215 RTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLSGFYQEIDENILP 285 (316)
T ss_dssp CHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETCCHHHHHHSCGGGSB
T ss_pred ChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCCHHHHHhhCCHhhCc
Confidence 888999999999999999999999999999999999999999999999999999 5789999999999874
No 26
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=99.82 E-value=2.8e-20 Score=186.26 Aligned_cols=141 Identities=11% Similarity=0.126 Sum_probs=126.3
Q ss_pred ChHHHHhcCce-EEcccCCCCCeEEEEEcccccCCCCCHHHHHHHHHHHhhhhcCC------CEEEEEEcCCCCCCC--C
Q 008583 388 NLSEIAEMKIV-YRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQK------PYSIVYFHSAASLQL--Q 458 (560)
Q Consensus 388 dl~~i~~~g~~-y~~G~D~~GrpViv~~~~~~d~~~~d~e~ll~~~i~~le~~~~~------~yviV~D~tg~s~~~--~ 458 (560)
++..+.+.|+. +..|+|++||||++++.++++++.++.++++++.++++|.++.+ .+++|+|++|+++.+ .
T Consensus 75 ~~~~~~~~g~~~~l~g~D~~GrpV~i~~~~~~d~~~~~~~~~~r~~~~~~E~~~~~~~~~~~g~~~I~D~~g~s~~~~~~ 154 (262)
T 1r5l_A 75 SIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGIKAIFDLEGWQFSHAFQ 154 (262)
T ss_dssp GTHHHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHHHHHHHTTSHHHHHHCEEEEEECTTCCHHHHHH
T ss_pred HHHHHHHcCCccCCCCcCCCCCEEEEEeccccCcccCCHHHHHHHHHHHHHHHHhChhhcccceEEEEECCCCCHHHHhc
Confidence 34555677875 45699999999999999999999999999999999999876653 499999999999874 4
Q ss_pred CCHHHHHHHHHHHhhHhhccccEEEEEcCChhHHHHHHHhhhcccccccceEEEECC--HhHHhccCCCCCCC
Q 008583 459 PDLGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNVVWKKVVYVDR--LLQLFRYVPREQLT 529 (560)
Q Consensus 459 ~~l~~lkk~~~~l~~~~p~rLk~iyivnp~~~~k~~~~~~~~fls~K~~~KI~~~~s--leeL~~~I~~eqL~ 529 (560)
++++++|++..+++++||+||+.+||||+|++|.++|++++||+++++++||+++.+ .++|.++|| ++|+
T Consensus 155 ~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~~~~~~L~~~i~-~~LP 226 (262)
T 1r5l_A 155 ITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQHFP-DILP 226 (262)
T ss_dssp CCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSSCHHHHHHHST-TTSC
T ss_pred cCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCCCcHHHHHHHhh-hhCc
Confidence 678999999999999999999999999999999999999999999999999999954 689999999 9875
No 27
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=99.79 E-value=2.9e-19 Score=182.49 Aligned_cols=138 Identities=18% Similarity=0.280 Sum_probs=117.9
Q ss_pred HHhcCceEEcccCCCCCeEEEEEcccccCCC----CCHHHHHHHHHHHhhhhc--------------CCCEEEEEEcCCC
Q 008583 392 IAEMKIVYRGGVDSEGRPVMVVVGAHFLLRC----LDLERFVLYVVKEFEPLI--------------QKPYSIVYFHSAA 453 (560)
Q Consensus 392 i~~~g~~y~~G~D~~GrpViv~~~~~~d~~~----~d~e~ll~~~i~~le~~~--------------~~~yviV~D~tg~ 453 (560)
+.+....+..|+|++||||++++.++++++. .+.++++++++..+|.++ .+.+++|+|++|+
T Consensus 100 ~~~~~~~~~~g~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~ 179 (296)
T 1aua_A 100 IAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERMLKNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGI 179 (296)
T ss_dssp HGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTC
T ss_pred HHHhCCceecccCCCCCEEEEEeeccCChHHhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCC
Confidence 3333334566999999999999999998753 588999999888877543 2459999999999
Q ss_pred CCCCCCC-HHHHHHHHHHHhhHhhccccEEEEEcCChhHHHHHHHhhhcccccccceEEEECC--HhHHhccCCCCCCC
Q 008583 454 SLQLQPD-LGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNVVWKKVVYVDR--LLQLFRYVPREQLT 529 (560)
Q Consensus 454 s~~~~~~-l~~lkk~~~~l~~~~p~rLk~iyivnp~~~~k~~~~~~~~fls~K~~~KI~~~~s--leeL~~~I~~eqL~ 529 (560)
++.+.+. .+++|++..+++++||+||+.+||||+|++|.++|++++||+++++++||+|+.+ .++|.++||+++|+
T Consensus 180 s~~~~~~~~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP 258 (296)
T 1aua_A 180 SISSAYSVMSYVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELLKQIPAENLP 258 (296)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSCCHHHHTTTSCSSSSB
T ss_pred CHHHHHHHHHHHHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcccHHHHHhhCCHhhCc
Confidence 9864332 6889999999999999999999999999999999999999999999999999965 78899999999764
No 28
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=99.77 E-value=4.4e-19 Score=183.35 Aligned_cols=138 Identities=20% Similarity=0.300 Sum_probs=118.8
Q ss_pred HHhcCceEEcccCCCCCeEEEEEcccccCCC----CCHHHHHHHHHHHhhhhc--------------CCCEEEEEEcCCC
Q 008583 392 IAEMKIVYRGGVDSEGRPVMVVVGAHFLLRC----LDLERFVLYVVKEFEPLI--------------QKPYSIVYFHSAA 453 (560)
Q Consensus 392 i~~~g~~y~~G~D~~GrpViv~~~~~~d~~~----~d~e~ll~~~i~~le~~~--------------~~~yviV~D~tg~ 453 (560)
+.+.+..|..|+|++||||++++.++++++. .+.++++++++..+|.++ .+..++|+|++|+
T Consensus 115 ~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g~ 194 (320)
T 3q8g_A 115 LAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKITTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGI 194 (320)
T ss_dssp HHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHHCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTC
T ss_pred HHHhCCceecCCCCCcCEEEEEeccccCHHHhhccCCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCCC
Confidence 3445556777999999999999999998764 478888888888777543 2457999999999
Q ss_pred CCCCCCC-HHHHHHHHHHHhhHhhccccEEEEEcCChhHHHHHHHhhhcccccccceEEEECC--HhHHhccCCCCCCC
Q 008583 454 SLQLQPD-LGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNVVWKKVVYVDR--LLQLFRYVPREQLT 529 (560)
Q Consensus 454 s~~~~~~-l~~lkk~~~~l~~~~p~rLk~iyivnp~~~~k~~~~~~~~fls~K~~~KI~~~~s--leeL~~~I~~eqL~ 529 (560)
++.+.+. ++++|++..+++++||+||+.+||||+|++|+++|++++||+++++++||+++.+ .++|.++||+++|+
T Consensus 195 sl~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~i~~~~LP 273 (320)
T 3q8g_A 195 SLSNAYHVLSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELLKQIPIENLP 273 (320)
T ss_dssp CHHHHHHTHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTTHHHHHHHHSCGGGSB
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCCcHHHHHhhCChhhCC
Confidence 9874322 7889999999999999999999999999999999999999999999999999965 68999999998764
No 29
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=99.75 E-value=3.2e-18 Score=182.33 Aligned_cols=130 Identities=15% Similarity=0.209 Sum_probs=117.1
Q ss_pred EcccCCCCCeEEEEEcccccCC----CCCHHHHHHHHHHHhhhhcC-------------CCEEEEEEcCCCCCCCC--CC
Q 008583 400 RGGVDSEGRPVMVVVGAHFLLR----CLDLERFVLYVVKEFEPLIQ-------------KPYSIVYFHSAASLQLQ--PD 460 (560)
Q Consensus 400 ~~G~D~~GrpViv~~~~~~d~~----~~d~e~ll~~~i~~le~~~~-------------~~yviV~D~tg~s~~~~--~~ 460 (560)
..|+|++||||++++.++++++ ..+.+++++++++.+|..+. +.+++|+|++|+++.+. +.
T Consensus 88 ~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~~ 167 (403)
T 1olm_A 88 MCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTKMRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPA 167 (403)
T ss_dssp EEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHH
T ss_pred eeccCCCcCEEEEEecCCCChHHhhccCCHHHHHHHHHHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhHH
Confidence 3589999999999999999986 57999999999999986542 46999999999998743 46
Q ss_pred HHHHHHHHHHHhhHhhccccEEEEEcCChhHHHHHHHhhhcccccccceEEEECC--HhHHhccCCCCCCC
Q 008583 461 LGWMRRLQQVLGRKHQRNLHAIYVLHPTFHLKATIFTLQLLVDNVVWKKVVYVDR--LLQLFRYVPREQLT 529 (560)
Q Consensus 461 l~~lkk~~~~l~~~~p~rLk~iyivnp~~~~k~~~~~~~~fls~K~~~KI~~~~s--leeL~~~I~~eqL~ 529 (560)
+.++|+++.+++++||+||+.+||||+|++|.++|++++|||++++++||+|+.+ .++|.++||+++|+
T Consensus 168 ~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~~~~~L~~~I~~~~LP 238 (403)
T 1olm_A 168 VEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLLKHISPDQVP 238 (403)
T ss_dssp HHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTTHHHHHTTTSCGGGSB
T ss_pred HHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEEChhHHHHHHhhcChhhCc
Confidence 7899999999999999999999999999999999999999999999999999964 67899999998764
No 30
>3sig_A PArg, poly(ADP-ribose) glycohydrolase; HET: AR6; 1.28A {Thermomonospora curvata} PDB: 3sih_A 3sii_A* 3sij_A
Probab=98.74 E-value=2.5e-08 Score=99.71 Aligned_cols=167 Identities=10% Similarity=0.052 Sum_probs=110.9
Q ss_pred CCEEEEEEcCCccc---------cccEEEEcCCcCCCCCC---ch----HHHHHhhC--hhHHH--HH---HH--hCCCC
Q 008583 82 NSKIYLWRGNPWNL---------EVDTVVNSTNENLDEAH---SS----PGLHAAAG--PGLAE--EC---AT--LGGCR 136 (560)
Q Consensus 82 n~~I~i~~GDI~~~---------~vDaIVN~aN~~l~~~~---~~----~aI~~~aG--~~L~~--e~---~~--~~~~~ 136 (560)
..+|.|+.+|-... .-=++.|.||..--.|| |+ .+|.+... +.|.. +. +. ..++.
T Consensus 64 ~t~i~V~~~dtl~aA~~L~~~~~~~v~vLNfAs~~~PGGG~~~Ga~AQEE~Lcr~S~Ly~sL~~~~~~Y~~~~~~~~~~~ 143 (277)
T 3sig_A 64 PTRIEVTEETTLAAARRLTGAAGDQVACLNFASAEHPGGGFLSGAHAQEEGLARSSGLYASLRAVPQFYAFHHRQRDPLY 143 (277)
T ss_dssp -CEEEEESCCHHHHHHHHHHHCSSCCEEEEECCSSSTTTTGGGTCCSHHHHHHHHBSHHHHHTTCHHHHHHHHHHCCTTC
T ss_pred CceEEEEeCCHHHHHHHHHHhcCCCeEEEecccccCCCCCcccCcchHHHHHHHhhhHHHHHhhhhhhhccccccCCCCC
Confidence 47899999986532 12378999988665444 22 24544433 11110 11 11 12334
Q ss_pred CCCEEEeec--------CCCC----CCeEEEEcCCccCC----CCchhHHHHHHHHHHHHHHHHHHcCCeeeeecccccC
Q 008583 137 TGMAKVTNA--------YDLP----ARRVIHTVGPKYAV----KYHTAAENALSHCYRSCLELLIENGLKSIAMGCIYTE 200 (560)
Q Consensus 137 ~G~~~vT~~--------~~L~----~k~IIH~VgP~~~~----~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~i~tG 200 (560)
+..++.++. +.|- .--||.++.|++.. .......+.|...++.+|..|.++|+++|++|++|||
T Consensus 144 ~~~~IySP~V~vfR~~~~~ll~~p~~v~vit~aApn~~~~~~~~~~~~~~~~l~~rir~vL~iA~~~g~~~LVLGA~GCG 223 (277)
T 3sig_A 144 SDHLIYSPGVPVFRDDAGRLLEEPYRVAFLTSPAPNRRAIGDLRTVEEIGRVLRGRAAKVLAAARHHGHRRLVLGAWGCG 223 (277)
T ss_dssp CSCEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTSS
T ss_pred CCCeEECCCcEEEeCCCCccccCCceeEEEEecCCCCccccCccchHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcccC
Confidence 444444432 2211 11378888887742 1123346789999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHcCCCccEEEEEecCh----hHHHHHHHHhh
Q 008583 201 AKNYPREPAAHVAIRTVRRFLEKQKDKISAVVFCTTTA----SDTEIYKRLLP 249 (560)
Q Consensus 201 ~~g~p~~~~A~i~l~~v~~fl~~~~~~i~~V~fv~~~~----~~~~~y~~~l~ 249 (560)
.||+|++++|+++.+.+...- +....+++|+|+++++ ..+++|++.+.
T Consensus 224 vfgnpp~~VA~~~~~vL~~~~-~f~~~f~~VvFAv~d~~~~~~n~~~F~~~F~ 275 (277)
T 3sig_A 224 VFGNDPAQVAETFAGLLLDGG-PFAGRFAHVVFAVWDTAPGAPRHAAFARRFG 275 (277)
T ss_dssp TTCCCHHHHHHHHHHHHSTTC-TTTTTCSEEEEECCCCSTTCHHHHHHHHHC-
T ss_pred cCCCCHHHHHHHHHHHHhhcc-hhcCCceEEEEEEecCCCcchHHHHHHHHHh
Confidence 999999999999999987411 1224789999999986 57888888764
No 31
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=50.23 E-value=2.5e+02 Score=29.85 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=70.1
Q ss_pred CEEEEEEcCCccccccEEEEcCCcCCCCCCchHHHHHhhChhHHHHHHHhC-CCCCCCEEEeec-CCCCCCeEEEEcCCc
Q 008583 83 SKIYLWRGNPWNLEVDTVVNSTNENLDEAHSSPGLHAAAGPGLAEECATLG-GCRTGMAKVTNA-YDLPARRVIHTVGPK 160 (560)
Q Consensus 83 ~~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~~~aI~~~aG~~L~~e~~~~~-~~~~G~~~vT~~-~~L~~k~IIH~VgP~ 160 (560)
.++.+..++...++.|++|-..-+.-........+-++.+..|.+-++..+ .-+.|++.+-.+ ..++++.|+-+-.-+
T Consensus 3 M~~~~~~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~~v~lvGlG~ 82 (490)
T 3jru_B 3 LQFTLNQDAPASAAVDCIVVGAFADKTLSPAAQALDSASQGRLTALLARGDVAGKTGSTTLLHDLPGVAAPRVLVVGLGD 82 (490)
T ss_dssp CEEEEECCCTTTCCSSEEEEEECTTSCBCHHHHHHHHHTTSHHHHHHHHTCSCCSTTCEEEEECCTTCSSSEEEEEECCC
T ss_pred eEEEEEcCCcccccCCEEEEEEeCCCccchhHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEccCCCCCccEEEEEecCC
Confidence 468888899999999999998755432222345676777777777666543 445788876654 446677766543211
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeec
Q 008583 161 YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMG 195 (560)
Q Consensus 161 ~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP 195 (560)
- ... ..+.++.+...+.+.+.+.+.+++++.
T Consensus 83 ~-~~~---~~~~~r~a~~~~~~~l~~~~~~~~~~~ 113 (490)
T 3jru_B 83 A-GKF---GVAPYLKAIGDATRALKTGAVGTALLT 113 (490)
T ss_dssp G-GGC---SHHHHHHHHHHHHHHHSSSSCSEEEEC
T ss_pred c-ccC---CHHHHHHHHHHHHHHHhhCCCceEEEE
Confidence 1 111 135677777777777777788886554
No 32
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=39.02 E-value=2.7e+02 Score=29.68 Aligned_cols=108 Identities=12% Similarity=0.069 Sum_probs=70.2
Q ss_pred EEEEEEcCCccccccEEEEcCCcCCCCCCchHHHHHhhChhHHHHHHHhC-CCCCCCEEEeec-CCCCCCeEEEEc-CCc
Q 008583 84 KIYLWRGNPWNLEVDTVVNSTNENLDEAHSSPGLHAAAGPGLAEECATLG-GCRTGMAKVTNA-YDLPARRVIHTV-GPK 160 (560)
Q Consensus 84 ~I~i~~GDI~~~~vDaIVN~aN~~l~~~~~~~aI~~~aG~~L~~e~~~~~-~~~~G~~~vT~~-~~L~~k~IIH~V-gP~ 160 (560)
++.+..+++.+++.|++|-..-+..........+-++.+..|.+-++..+ .-+.|++.+-.. ..++++.|+-+- |..
T Consensus 2 ~~~~~~~~~~~~~~d~lvv~v~~~~~l~~~~~~ld~~~~g~l~~~~~~~~f~gk~G~~~~l~~~~~~~~~rv~lvGlG~~ 81 (497)
T 3h8g_F 2 ELVVKSVAAASVKTATLVIPVGENRKLGAVAKAVDLASEGAISAVLKRGDLAGKPGQTLLLQNLQGLKAERVLLVGSGKD 81 (497)
T ss_dssp EEEEECSCGGGCCBSCEEEEEEGGGCCCHHHHHHHHHTTTHHHHHHHTCCCCCCTTCEEEECCCTTCSBSCEEEEEEESS
T ss_pred EEEEEcCChhhccCCEEEEEEecCCccchHHHHHhHHHHHHHHHHHHhCCCCCCCCCEEEEcCCCCCCccEEEEEECCCc
Confidence 57788899999999999987755432222345666777777776665543 345788877654 345666655432 321
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeecc
Q 008583 161 YAVKYHTAAENALSHCYRSCLELLIENGLKSIAMGC 196 (560)
Q Consensus 161 ~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP~ 196 (560)
.. ...+.++.+...+.+.+.+.+.+++++-.
T Consensus 82 --~~---~~~~~~r~a~~~~~~~l~~~~~~~~~~~l 112 (497)
T 3h8g_F 82 --EA---LGDRTWRKLVASVAGVLKGLNGADAVLAL 112 (497)
T ss_dssp --SC---BCHHHHHHHHHHHHHHHHHSCCSEEEECC
T ss_pred --cc---CCHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 11 12356888888888888889988766543
No 33
>2vg0_A Short-chain Z-isoprenyl diphosphate synthetase; peptidoglycan synthesis, cell WALL biogenesis/degradation, secreted, cell shape; HET: GPP; 1.7A {Mycobacterium tuberculosis} PDB: 2vfw_A* 2vg1_A*
Probab=34.31 E-value=53 Score=31.30 Aligned_cols=50 Identities=14% Similarity=0.088 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008583 173 LSHCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (560)
Q Consensus 173 L~~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~ 223 (560)
=...++++++.|.+.|++.+.+=+.||+++.=|.+++ ..+++-+++++..
T Consensus 32 G~~~l~~i~~~c~~~GI~~lTlYaFSteN~kRp~~Ev-~~Lm~l~~~~l~~ 81 (227)
T 2vg0_A 32 GAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDEL-AALIEIITDVVEE 81 (227)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEEEEETGGGGSCHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeecccccCCCHHHH-HHHHHHHHHHHHH
Confidence 3467888888899999999999999999999999988 5666777777776
No 34
>3l7q_A Putative translation initiation inhibitor, ALDR R like protein; translation initiation inhibitor regulator-like; 2.50A {Streptococcus mutans} SCOP: d.79.1.0
Probab=29.78 E-value=1.4e+02 Score=25.15 Aligned_cols=50 Identities=8% Similarity=0.161 Sum_probs=34.5
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPR 254 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfpr 254 (560)
+..+-++.+++.+..-|+.... ++-++.+.+.+..++..+.+....||+.
T Consensus 45 d~~~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~v~~~~f~~ 97 (125)
T 3l7q_A 45 TIEEQTQQVLKNISAILTEAGTDFDHVVKTTCFLSDIDDFVPFNEVYATAFKS 97 (125)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCCS
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcCC
Confidence 4455666666666666666543 3445555567788999999999999973
No 35
>3k0t_A Endoribonuclease L-PSP, putative; glucose binding, ER stressor, sugar binding protein; HET: BGC; 2.10A {Pseudomonas syringae PV}
Probab=29.08 E-value=1.4e+02 Score=26.08 Aligned_cols=49 Identities=10% Similarity=0.131 Sum_probs=34.7
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
...+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+.+..||+
T Consensus 63 d~~~Qt~~~l~ni~aiL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 114 (143)
T 3k0t_A 63 GIEAQITQVFENLKSVAQAAGGSFKDIVKLNIFLTDLGHFAKVNEIMGSYFS 114 (143)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCChHHEEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 4455666677777777776553 344555556677899999999999997
No 36
>1qd9_A Purine regulatory protein YABJ; perchloric acid soluble protein, purine regulation, YJGF/YER057C family, gene regulation; 1.70A {Bacillus subtilis} SCOP: d.79.1.1
Probab=27.25 E-value=1.7e+02 Score=24.54 Aligned_cols=49 Identities=10% Similarity=0.169 Sum_probs=33.5
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
+..+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+
T Consensus 44 d~~~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~ 95 (124)
T 1qd9_A 44 DIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFD 95 (124)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHHHcC
Confidence 4455566666666666666543 344555556677889999999999997
No 37
>3kjj_A NMB1025 protein; YJGF protein family, OPPF, structural genomics, oxford protein production facility, UN function; 1.90A {Neisseria meningitidis serogroup B} PDB: 3kjk_A
Probab=26.58 E-value=1.6e+02 Score=25.10 Aligned_cols=50 Identities=8% Similarity=0.120 Sum_probs=37.5
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPR 254 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfpr 254 (560)
...+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+.
T Consensus 42 d~~~Q~~~~l~nl~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~~ 94 (128)
T 3kjj_A 42 TAAEQTADVLAQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAA 94 (128)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSCT
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhCC
Confidence 4566777788888888888663 4445555566778899999999999984
No 38
>3r0p_A L-PSP putative endoribonuclease; hydrolase; 1.90A {Uncultured organism} SCOP: d.79.1.0
Probab=25.72 E-value=1.7e+02 Score=24.61 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 206 REPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 206 ~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
..+-++.+++.+..-|+.... ++-++.+.+.+..++..+.+.+..||+
T Consensus 49 ~~~Q~~~~l~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~~~v~~~~f~ 99 (127)
T 3r0p_A 49 FAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQ 99 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCGGGEEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 445555566666666666542 345555566778899999999999997
No 39
>1qu9_A YJGF protein; structural genomics; HET: CSP; 1.20A {Escherichia coli} SCOP: d.79.1.1 PDB: 1j7h_A 2uyk_A 2uyj_A 2uyn_A* 2uyp_A
Probab=25.15 E-value=1.1e+02 Score=25.82 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=31.9
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
...+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+
T Consensus 45 d~~~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~n~~~~~~f~ 96 (128)
T 1qu9_A 45 DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFT 96 (128)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCHHHHHHHHHHHHHHcC
Confidence 3455555566666666666543 344455556677888888888888885
No 40
>3k12_A Uncharacterized protein A6V7T0; structural genomics, unknown function, PSI-2, protein struct initiative; 1.49A {Pseudomonas aeruginosa}
Probab=23.85 E-value=1.7e+02 Score=24.60 Aligned_cols=47 Identities=13% Similarity=0.261 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCCC
Q 008583 208 PAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPR 254 (560)
Q Consensus 208 ~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfpr 254 (560)
+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+.
T Consensus 37 ~Q~~~~l~ni~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~~f~~ 86 (122)
T 3k12_A 37 DQTRQILENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQWFPE 86 (122)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHTTTSCT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhCC
Confidence 3344444444444444332 3445555566778999999999999973
No 41
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=23.72 E-value=1.6e+02 Score=24.88 Aligned_cols=114 Identities=7% Similarity=-0.030 Sum_probs=62.3
Q ss_pred cCceEEcccCCCCCeEEEEEcccccCCCCCHHHHHHHHHHHhhhhcCCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHhhH
Q 008583 395 MKIVYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQLQPDLGWMRRLQQVLGRK 474 (560)
Q Consensus 395 ~g~~y~~G~D~~GrpViv~~~~~~d~~~~d~e~ll~~~i~~le~~~~~~yviV~D~tg~s~~~~~~l~~lkk~~~~l~~~ 474 (560)
.|+++..-.+..+.-+-+-..+.+.. -|++.++..+-..++..-...+.+++|++.+.. +++.-+..-+. +...
T Consensus 7 ~~~mi~i~~~~~~~vl~v~~~G~lt~--~d~~~l~~~l~~~l~~~~~~~i~ll~~~~~f~G---~~~~a~~~d~k-~~~~ 80 (126)
T 2q3l_A 7 HGIAIGIERSQDDFYLAFKAVGKLTH--EDYEQMTPLLESALAGIKTPEIVALIDITELDG---LSLHAAWDDLK-LGLK 80 (126)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEECH--HHHHHHHHHHHHHTTTCCSSCEEEEEEEEEEEE---ECHHHHHHHHH-HHHH
T ss_pred cceeEEEEEcCCCCEEEEEEEeeECH--HHHHHHHHHHHHHHHhCCCceEEEEEEecCCCC---CCHHHHHHHHH-hhhh
Confidence 45555433333333333333344422 334444433333333222222888888765531 22332222222 2346
Q ss_pred hhccccEEEEEcCChhHHHHHHHhhhcccccccceEEEECCHhH
Q 008583 475 HQRNLHAIYVLHPTFHLKATIFTLQLLVDNVVWKKVVYVDRLLQ 518 (560)
Q Consensus 475 ~p~rLk~iyivnp~~~~k~~~~~~~~fls~K~~~KI~~~~slee 518 (560)
+...+..+-||=-+.|.+...+++.+|++. .|++.+..++
T Consensus 81 h~~~~~RiAvV~d~~W~~~~~~~~~~~~~~----evk~F~~~~~ 120 (126)
T 2q3l_A 81 HGKEFKRVAIIGQGELQEWATRVANWFTPG----EFKFFEDKRD 120 (126)
T ss_dssp HGGGEEEEEEECCSHHHHHHHHHHHHHCSS----EEEEESCHHH
T ss_pred HHhcCCEEEEEcChHHHHHHHHHHhhccCC----ceeccCCHHH
Confidence 678899999999999999999999999765 3555555544
No 42
>3ugs_B Undecaprenyl pyrophosphate synthase; niaid, csgid, structural genomics, center for structural GEN infectious diseases; HET: FFT; 2.46A {Campylobacter jejuni} SCOP: c.101.1.0
Probab=23.60 E-value=2.4e+02 Score=26.72 Aligned_cols=48 Identities=15% Similarity=0.335 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHcCCeeeeecccccCCCCCChHHHHHHHHHHHHHHHHH
Q 008583 175 HCYRSCLELLIENGLKSIAMGCIYTEAKNYPREPAAHVAIRTVRRFLEK 223 (560)
Q Consensus 175 ~~~~~~L~~a~e~~~~SIafP~i~tG~~g~p~~~~A~i~l~~v~~fl~~ 223 (560)
..++++++.|.+.|++.+.+=++||.++.=|.+++... ++-+++|+.+
T Consensus 37 ~~~~~i~~~c~~lGI~~lTlYaFStENw~Rp~~EV~~L-m~L~~~~l~~ 84 (225)
T 3ugs_B 37 KTMQKLMEVCMEENISNLSLFAFSTENWKRPKDEIDFI-FELLDRCLDE 84 (225)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEESGGGGSCHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEcccccCCCHHHHHHH-HHHHHHHHHH
Confidence 56677788888999999999999999999999887654 3444455543
No 43
>3lyb_A Putative endoribonuclease; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.66A {Klebsiella pneumoniae}
Probab=23.58 E-value=73 Score=28.67 Aligned_cols=46 Identities=15% Similarity=0.338 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 208 PAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 208 ~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
.-++.+++.+..-|+.... .+-++.+.+.+..++..+.+.+..||+
T Consensus 71 ~Qt~~~l~Ni~aiL~~aG~~l~~Vvkvtvyl~d~~df~~~n~v~~~~f~ 119 (165)
T 3lyb_A 71 AQSWYVLESIRRTVASAGGQMSDVIKLVQYFRNLDHFPYYSRVRKLFYP 119 (165)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHhcCChhHhEEEEEEECCHHHhHHHHHHHHHHcC
Confidence 3444445555555555432 344555556678899999999999997
No 44
>3gtz_A Putative translation initiation inhibitor; structural genomics, unknown function, PSI-2, protein struct initiative; 2.50A {Salmonella typhimurium}
Probab=23.01 E-value=1.7e+02 Score=24.72 Aligned_cols=47 Identities=13% Similarity=0.145 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 207 EPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 207 ~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
.+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+
T Consensus 38 ~~Q~~~~l~nl~~~L~~aG~~~~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 87 (124)
T 3gtz_A 38 FEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVV 87 (124)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCHHHHHHHHHHHHHHhC
Confidence 33444444444444544432 344555556677899999999999998
No 45
>2cvl_A TTHA0137, protein translation initiation inhibitor; structural genomics, NPPSFA; 1.65A {Thermus thermophilus} SCOP: d.79.1.1 PDB: 2csl_A 2cw4_A
Probab=22.34 E-value=2.4e+02 Score=23.57 Aligned_cols=49 Identities=10% Similarity=0.195 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCCC
Q 008583 206 REPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPR 254 (560)
Q Consensus 206 ~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfpr 254 (560)
..+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+.+..||+.
T Consensus 45 ~~~Q~~~~l~ni~~~L~~ag~~~~~vvk~~vyl~d~~~~~~~~~~~~~~f~~ 96 (124)
T 2cvl_A 45 IRVQTERVMENLKAVLEAAGSGLSRVVQTTCFLADMEDFPGFNEVYARYFTP 96 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCCS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcChHHHHHHHHHHHHHcCC
Confidence 455555666666666666543 3444555566778899999999999973
No 46
>1qah_A Perchloric acid soluble protein; alpha-beta structure; 1.80A {Rattus norvegicus} SCOP: d.79.1.1 PDB: 1oni_A 1nq3_A
Probab=22.06 E-value=2.3e+02 Score=24.24 Aligned_cols=49 Identities=12% Similarity=0.175 Sum_probs=32.5
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
...+-++.+++.+..-|+.... ++-++.+.+.+..++..+.+.+..||+
T Consensus 49 d~~~Q~~~~l~ni~~~L~~aG~~l~~vvk~~vyl~d~~d~~~~n~~~~~~f~ 100 (136)
T 1qah_A 49 GVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQ 100 (136)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEccCccHHHHHHHHHHHcC
Confidence 3455555555666666665442 344555556778899999999999996
No 47
>1x25_A Hypothetical UPF0076 protein ST0811; YJGF-like protein, archaea, structural genomics, UNK function; 2.00A {Sulfolobus tokodaii} SCOP: d.79.1.1
Probab=21.55 E-value=1.8e+02 Score=24.51 Aligned_cols=48 Identities=4% Similarity=0.122 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 206 REPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 206 ~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
..+-++.+++.+..-|+.... ++-++.+.+.+..++..+.+.+..||+
T Consensus 49 ~~~Q~~~~l~ni~~~L~~ag~~l~~vvk~~vyl~d~~~~~~~n~~~~~~f~ 99 (128)
T 1x25_A 49 IKVQTRQVLDNIKEIVKAAGFSLSDVAMAFVFLKDMNMFNDFNSVYAEYFK 99 (128)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHEEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 344455555555555555442 344555556677889999999999997
No 48
>1pf5_A Hypothetical protein YJGH; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.50A {Escherichia coli} SCOP: d.79.1.1
Probab=21.28 E-value=2.2e+02 Score=24.07 Aligned_cols=50 Identities=14% Similarity=0.043 Sum_probs=33.3
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecCh-hHHHHHHHHhhhcCCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTA-SDTEIYKRLLPLYFPR 254 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~-~~~~~y~~~l~~yfpr 254 (560)
...+-++.+++.+..-|+.... .+-++.+.+.+. .++..+.+....||+.
T Consensus 48 d~~~Q~~~~l~ni~~~L~~aG~~~~~vvk~~vyl~d~~~~~~~~~~~~~~~f~~ 101 (131)
T 1pf5_A 48 DFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSA 101 (131)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESSGGGTHHHHHHHHHHHSCS
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCcHHhHHHHHHHHHHHcCC
Confidence 3455556666666666666553 344444555666 8999999999999974
No 49
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=21.10 E-value=60 Score=29.59 Aligned_cols=43 Identities=16% Similarity=0.210 Sum_probs=26.5
Q ss_pred CCeEEEEcCCccCCCCchhHHHHHHHHHHHHHHHHHHcCCeeeeec
Q 008583 150 ARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIENGLKSIAMG 195 (560)
Q Consensus 150 ~k~IIH~VgP~~~~~~~~~~~~~L~~~~~~~L~~a~e~~~~SIafP 195 (560)
++.|||++|+.+..... .+.-.....++++.|.+.+.+.|.+-
T Consensus 68 ~d~vi~~a~~~~~~~~~---~~~n~~~~~~l~~~~~~~~~~~~v~~ 110 (227)
T 3dhn_A 68 ADAVISAFNPGWNNPDI---YDETIKVYLTIIDGVKKAGVNRFLMV 110 (227)
T ss_dssp CSEEEECCCC------C---CSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEeCcCCCCChhH---HHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 68999999987654321 11223456778888888898877774
No 50
>3v4d_A Aminoacrylate peracid reductase RUTC; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 1.95A {Escherichia coli O6}
Probab=20.93 E-value=2.4e+02 Score=23.94 Aligned_cols=48 Identities=13% Similarity=0.276 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 206 REPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 206 ~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
..+-++.+++.+..-|+.... ++-++.+.+.+..++..+.+....||+
T Consensus 54 ~~~Q~~~~l~nl~~~L~~aG~~l~~vvk~~vyl~d~~~f~~~n~v~~~~f~ 104 (134)
T 3v4d_A 54 PKAQTRHVLETIRKVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFP 104 (134)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHeEEEEEEECCHHHHHHHHHHHHHHcC
Confidence 344455555556565655442 344555556677899999999999997
No 51
>3vcz_A Endoribonuclease L-PSP; virulence, pathogenesis, infectious diseases, center for STR genomics of infectious diseases, csgid, translation; HET: GOL; 1.80A {Vibrio vulnificus}
Probab=20.79 E-value=1.4e+02 Score=26.45 Aligned_cols=49 Identities=12% Similarity=0.151 Sum_probs=31.6
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
...+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+.+..||+
T Consensus 69 d~~~Qt~~~l~nl~a~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 120 (153)
T 3vcz_A 69 DIAAQARQSLDNVKAVVEASGLTVGDIVKMTVFVKDLNDFGTVNEVYGNFFD 120 (153)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEEcCchHHHHHHHHHHHHhC
Confidence 3455555566666666665543 344555556677888888888888886
No 52
>1xrg_A Putative translation initiation inhibitor, YJGF family; conserved hypothetical protein, protein structure initiative, PSI; 2.20A {Clostridium thermocellum} SCOP: d.79.1.1
Probab=20.37 E-value=2.4e+02 Score=24.86 Aligned_cols=49 Identities=14% Similarity=0.209 Sum_probs=32.7
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
+..+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+....||+
T Consensus 77 d~~~Qt~~~l~ni~~iL~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 128 (156)
T 1xrg_A 77 GIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFS 128 (156)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhCCCHHHEEEEEEEECChHHHHHHHHHHHHHcC
Confidence 3445555566666666666543 344555556677899999999999997
No 53
>1jd1_A Hypothetical 13.9 kDa protein in FCY2-PET117 intergenic region; translation inhibitor, structural genomics, PSI; 1.70A {Saccharomyces cerevisiae} SCOP: d.79.1.1
Probab=20.36 E-value=2e+02 Score=24.32 Aligned_cols=48 Identities=15% Similarity=0.288 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCCC
Q 008583 207 EPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFPR 254 (560)
Q Consensus 207 ~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfpr 254 (560)
.+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+.+..||+.
T Consensus 50 ~~Q~~~~l~ni~~~L~~aG~~~~~vvk~~vyl~d~~d~~~~n~~~~~~f~~ 100 (129)
T 1jd1_A 50 ADKAEQVIQNIKNVLEASNSSLDRVVKVNIFLADINHFAEFNSVYAKYFNT 100 (129)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHeEEEEEEEcChHHHHHHHHHHHHHcCC
Confidence 34444444444444444332 3445555566778999999999999973
No 54
>2b33_A Protein synthesis inhibitor, putative; putative endoribonuclease, STRU genomics, joint center for structural genomics, JCSG; 2.30A {Thermotoga maritima} SCOP: d.79.1.1
Probab=20.12 E-value=2e+02 Score=24.88 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=31.8
Q ss_pred ChHHHHHHHHHHHHHHHHHcCC---CccEEEEEecChhHHHHHHHHhhhcCC
Q 008583 205 PREPAAHVAIRTVRRFLEKQKD---KISAVVFCTTTASDTEIYKRLLPLYFP 253 (560)
Q Consensus 205 p~~~~A~i~l~~v~~fl~~~~~---~i~~V~fv~~~~~~~~~y~~~l~~yfp 253 (560)
+..+-++.+++.+..-|+.... .+-++.+.+.+..++..+.+.+..||+
T Consensus 58 d~~~Qt~~~l~ni~~~L~~aG~~l~~Vvk~tvyl~d~~df~~~n~v~~~~f~ 109 (140)
T 2b33_A 58 TIEEKTERVLENLKAILEAGGFSLKDVVKVTVFTTSMDYFQRVNEVYSRYFG 109 (140)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEESCGGGHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCHHHEEEEEEEECCchhHHHHHHHHHHHCC
Confidence 3445555566666666666543 344455556667888888888888887
Done!