BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008587
(560 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80977|VSR3_ARATH Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2
SV=1
Length = 628
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/496 (84%), Positives = 461/496 (92%)
Query: 27 SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGI 86
+RFVVEKNSL VTSPE IKG+HDSAIGNFGIPQYGGSMAG V YPKEN+K C+EF DF I
Sbjct: 24 ARFVVEKNSLSVTSPESIKGTHDSAIGNFGIPQYGGSMAGTVVYPKENQKSCKEFSDFSI 83
Query: 87 SFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSA 146
SFK++PGALP F+LVDRGDCFFALKVWNAQKAGASAVLVAD+++E LITMDTPEED+SSA
Sbjct: 84 SFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSA 143
Query: 147 KYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDEC 206
KYIENITIPSAL+ K FGE LKKA+SGG+MVN+NLDWREAVPHPDDRVEYELWTNSNDEC
Sbjct: 144 KYIENITIPSALVTKGFGEKLKKAISGGDMVNLNLDWREAVPHPDDRVEYELWTNSNDEC 203
Query: 207 GVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCINHGRYCA 266
GVKCDMLM FVK+F+G AQILEKGG+TQF PHYITWYCP FTLSRQCKSQCIN GRYCA
Sbjct: 204 GVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWYCPHAFTLSRQCKSQCINKGRYCA 263
Query: 267 PDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWWDYVTDFQIRCPMKDKKYNKE 326
PDPEQDFSSGY+GKDVV+ENLRQLCV+KVA E+ KPWVWWDYVTDFQIRCPMK+KKYNKE
Sbjct: 264 PDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKE 323
Query: 327 CAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ 386
CA +VIKSLG+D+KK++KCMGDPDAD DNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ
Sbjct: 324 CADSVIKSLGIDSKKLDKCMGDPDADLDNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ 383
Query: 387 YRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFR 446
YRGKLEK AVLKA+CSGFEETTEPA+CLS DVE+NECLDNNGGCWQDK+AN+TACKDTFR
Sbjct: 384 YRGKLEKSAVLKALCSGFEETTEPAICLSTDVESNECLDNNGGCWQDKSANITACKDTFR 443
Query: 447 GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQC 506
GRVCECP VDGVQFKGDGYSHCE SGPG+C INNGGCWHE +DGH +SAC+D ++ KC+C
Sbjct: 444 GRVCECPTVDGVQFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCEC 503
Query: 507 PPGFKGDGVKSCILMN 522
PPGFKGDG K C +N
Sbjct: 504 PPGFKGDGTKKCEDIN 519
>sp|Q56ZQ3|VSR4_ARATH Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2
SV=2
Length = 628
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/496 (83%), Positives = 462/496 (93%)
Query: 27 SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGI 86
+RFVVEKNSL VTSPE IKG+HDSAIGNFGIPQYGGSMAG V YPKEN+K C+EF DF I
Sbjct: 24 ARFVVEKNSLSVTSPESIKGTHDSAIGNFGIPQYGGSMAGTVVYPKENQKSCKEFSDFSI 83
Query: 87 SFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSA 146
SFK++PGALP F+LVDRGDCFFALKVWNAQKAGASAVLVAD+++E LITMDTPEED+SSA
Sbjct: 84 SFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSA 143
Query: 147 KYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDEC 206
KYIENITIPSAL+ K FGE LKKA+SGG+MVN+NLDWREAVPHPDDRVEYELWTNSNDEC
Sbjct: 144 KYIENITIPSALVTKGFGEKLKKAISGGDMVNLNLDWREAVPHPDDRVEYELWTNSNDEC 203
Query: 207 GVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCINHGRYCA 266
GVKCDMLM FVK+F+G AQILEKGG+TQF PHYITWYCP FTLSRQCKSQCIN GRYCA
Sbjct: 204 GVKCDMLMEFVKDFKGAAQILEKGGFTQFRPHYITWYCPHAFTLSRQCKSQCINKGRYCA 263
Query: 267 PDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWWDYVTDFQIRCPMKDKKYNKE 326
PDPEQDFSSGY+GKDVV+ENLRQLCV+KVA E+ KPWVWWDYVTDFQIRCPMK+KKYNK+
Sbjct: 264 PDPEQDFSSGYDGKDVVVENLRQLCVYKVANETGKPWVWWDYVTDFQIRCPMKEKKYNKD 323
Query: 327 CAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ 386
CA +VIKSLG+D++KI+KCMGDPDAD DNPVLKEEQDAQVGKG+RGDVTILPTLVVNNRQ
Sbjct: 324 CAESVIKSLGIDSRKIDKCMGDPDADLDNPVLKEEQDAQVGKGTRGDVTILPTLVVNNRQ 383
Query: 387 YRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFR 446
YRGKLEK AVLKA+CSGFEE+TEPA+CLS D+ETNECLDNNGGCWQDK+AN+TACKDTFR
Sbjct: 384 YRGKLEKSAVLKALCSGFEESTEPAICLSTDMETNECLDNNGGCWQDKSANITACKDTFR 443
Query: 447 GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQC 506
G+VC CP+VDGV+FKGDGYSHCE SGPG+C INNGGCWHE +DGH +SAC+D ++ KC+C
Sbjct: 444 GKVCVCPIVDGVRFKGDGYSHCEPSGPGRCTINNGGCWHEERDGHAFSACVDKDSVKCEC 503
Query: 507 PPGFKGDGVKSCILMN 522
PPGFKGDGVK C +N
Sbjct: 504 PPGFKGDGVKKCEDIN 519
>sp|P93484|VSR1_PEA Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1
Length = 623
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/508 (83%), Positives = 465/508 (91%), Gaps = 7/508 (1%)
Query: 11 LFLGFLILSLNVHTSVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAGAVTY 70
LFLGF++ SL S +RFVVEKNSL VTSPEKIKG HDSAIGNFGIPQYGGSMAG V Y
Sbjct: 10 LFLGFMLTSL----STARFVVEKNSLSVTSPEKIKGKHDSAIGNFGIPQYGGSMAGNVVY 65
Query: 71 PKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIE 130
PK+N KGC+ DF SFK++PGALP +L+DRG CFFALKVWNAQKAGASAVLVADDIE
Sbjct: 66 PKDNSKGCK---DFDSSFKSRPGALPTILLLDRGSCFFALKVWNAQKAGASAVLVADDIE 122
Query: 131 EALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPHP 190
E LITMDTPEED+SSAKYIENITIPSALI KSFGE LK A+SGG+MVNVNLDWREAVPHP
Sbjct: 123 EPLITMDTPEEDVSSAKYIENITIPSALIGKSFGEKLKDAISGGDMVNVNLDWREAVPHP 182
Query: 191 DDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTL 250
DDRVEYELWTNSNDECGVKCDML+ F+K+F+G AQILEKGGYTQFTPHYITWYCP FTL
Sbjct: 183 DDRVEYELWTNSNDECGVKCDMLIEFLKDFKGAAQILEKGGYTQFTPHYITWYCPHAFTL 242
Query: 251 SRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWWDYVT 310
S+QCKSQCINHGRYCAPDPEQDF++GY+GKDVV+ENLRQLCVFKVAKE++K WVWWDYVT
Sbjct: 243 SKQCKSQCINHGRYCAPDPEQDFNTGYDGKDVVVENLRQLCVFKVAKETEKSWVWWDYVT 302
Query: 311 DFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGS 370
DFQIRCPMK+KKYNKECA +VIKSLGLD +KI+KCMGDP+AD +N +LKEEQDAQ+GKG+
Sbjct: 303 DFQIRCPMKEKKYNKECANSVIKSLGLDVEKIDKCMGDPNADTENSILKEEQDAQIGKGT 362
Query: 371 RGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNECLDNNGGC 430
RGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETT+PAVCLS DVETNECL NNGGC
Sbjct: 363 RGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTDPAVCLSNDVETNECLTNNGGC 422
Query: 431 WQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDG 490
WQDKTAN+ ACKDTFRGRVCECPLVDGVQFKGDGY+ CEVSG G+CKINNGGCWH++++G
Sbjct: 423 WQDKTANIAACKDTFRGRVCECPLVDGVQFKGDGYTTCEVSGHGRCKINNGGCWHDARNG 482
Query: 491 HTYSACLDSENGKCQCPPGFKGDGVKSC 518
H +SACLD KCQCP GFKGDGVK+C
Sbjct: 483 HAFSACLDDGGVKCQCPAGFKGDGVKNC 510
>sp|P93026|VSR1_ARATH Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1
SV=2
Length = 623
Score = 779 bits (2012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/512 (70%), Positives = 435/512 (84%), Gaps = 2/512 (0%)
Query: 7 ITLKLFLGFLILSLNVHTSVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAG 66
+ L LF +L LN+ ++ RFVVEKN+L VTSP+ IKG ++ AIGNFG+PQYGG++ G
Sbjct: 1 MKLGLFTLSFLLILNL--AMGRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVG 58
Query: 67 AVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVA 126
V YPK N+K C+ + DF ISFK+KPG LP FVL+DRGDC+F LK W AQ+AGA+A+LVA
Sbjct: 59 TVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCYFTLKAWIAQQAGAAAILVA 118
Query: 127 DDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREA 186
D E LITMDTPEED S A Y++NITIPSALI K+ G+++K ALSGG+MVN+ LDW E+
Sbjct: 119 DSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMKLDWTES 178
Query: 187 VPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPM 246
VPHPD+RVEYELWTNSNDECG KCD + F+K F+G AQILEKGG+TQFTPHYITWYCP
Sbjct: 179 VPHPDERVEYELWTNSNDECGKKCDTQIEFLKNFKGAAQILEKGGHTQFTPHYITWYCPE 238
Query: 247 TFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWW 306
FTLS+QCKSQCINHGRYCAPDPEQDF+ GY+GKDVV++NLRQ CV++V ++ KPWVWW
Sbjct: 239 AFTLSKQCKSQCINHGRYCAPDPEQDFTKGYDGKDVVVQNLRQACVYRVMNDTGKPWVWW 298
Query: 307 DYVTDFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQV 366
DYVTDF IRCPMK+KKY KECA +IKSLG+D KK++KC+GDP+AD +NPVLK EQ++Q+
Sbjct: 299 DYVTDFAIRCPMKEKKYTKECADGIIKSLGIDLKKVDKCIGDPEADVENPVLKAEQESQI 358
Query: 367 GKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNECLDN 426
GKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKA+CSGF+E+TEPA+CL+ D+ETNECL+N
Sbjct: 359 GKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAMCSGFQESTEPAICLTEDLETNECLEN 418
Query: 427 NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHE 486
NGGCWQDK AN+TAC+DTFRGR+CECP V GV+F GDGY+HC+ SG C INNGGCW E
Sbjct: 419 NGGCWQDKAANITACRDTFRGRLCECPTVQGVKFVGDGYTHCKASGALHCGINNGGCWRE 478
Query: 487 SKDGHTYSACLDSENGKCQCPPGFKGDGVKSC 518
S+ G TYSAC+D + C+CP GFKGDGVK+C
Sbjct: 479 SRGGFTYSACVDDHSKDCKCPLGFKGDGVKNC 510
>sp|O22925|VSR2_ARATH Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2
SV=1
Length = 625
Score = 766 bits (1977), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/516 (66%), Positives = 425/516 (82%), Gaps = 1/516 (0%)
Query: 8 TLKLFLGFLI-LSLNVHTSVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGSMAG 66
T ++L ++ +++ + RFVVEKN+L VTSPE I+G ++ A+GNFG+PQYGGSM+G
Sbjct: 3 TTNVWLVVIVWVTVGWSSCTGRFVVEKNNLRVTSPESIRGVYECALGNFGVPQYGGSMSG 62
Query: 67 AVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVA 126
AV YPK N+K C+ F DF ISF+++ LP FVLVDRGDC+F LK WNAQ+AGA+ +LVA
Sbjct: 63 AVVYPKTNQKACKNFDDFEISFRSRVAGLPTFVLVDRGDCYFTLKAWNAQRAGAATILVA 122
Query: 127 DDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREA 186
D+ E LITMD PE++ S A Y++NITIPSAL+ +S G +K A++ G+ V+++LDWREA
Sbjct: 123 DNRPEQLITMDAPEDETSDADYLQNITIPSALVSRSLGSAIKTAIAHGDPVHISLDWREA 182
Query: 187 VPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPM 246
+PHP+DRV YELWTNSNDECG KCD + F+K F+G AQILEKGGYT+FTPHYITWYCP
Sbjct: 183 LPHPNDRVAYELWTNSNDECGSKCDAQIRFLKRFKGAAQILEKGGYTRFTPHYITWYCPE 242
Query: 247 TFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWW 306
F SRQCK+QCIN GRYCAPDPEQDFS GY GKDV+++NLRQ C F+V ES KPW+WW
Sbjct: 243 AFLASRQCKTQCINGGRYCAPDPEQDFSRGYNGKDVIIQNLRQACFFRVTNESGKPWLWW 302
Query: 307 DYVTDFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQV 366
DYVTDF IRCPMK++KYNK+CA VI+SLG+D KKI+KC+GD DA+A+NPVLKEEQ AQV
Sbjct: 303 DYVTDFAIRCPMKEEKYNKKCADQVIQSLGVDVKKIDKCIGDIDANAENPVLKEEQVAQV 362
Query: 367 GKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNECLDN 426
GKGSRGDVTILPT+V+NNRQYRGKL++ AVLKA+CSGF ETTEP +CL+ D+ETNECL N
Sbjct: 363 GKGSRGDVTILPTIVINNRQYRGKLQRSAVLKALCSGFRETTEPPICLTEDIETNECLQN 422
Query: 427 NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHE 486
NGGCW+DKT N+TAC+DTFRGRVC+CP+V GV+F GDGY+HCE SG +C INNGGCW +
Sbjct: 423 NGGCWEDKTTNITACRDTFRGRVCQCPIVQGVKFLGDGYTHCEASGALRCGINNGGCWKQ 482
Query: 487 SKDGHTYSACLDSENGKCQCPPGFKGDGVKSCILMN 522
++ G TYSAC D + C+CPPGF GDG+K C +N
Sbjct: 483 TQMGKTYSACRDDHSKGCKCPPGFIGDGLKECKDVN 518
>sp|Q9FYH7|VSR6_ARATH Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2
SV=3
Length = 631
Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/513 (63%), Positives = 399/513 (77%), Gaps = 7/513 (1%)
Query: 4 HGSITLKLFLGFLILSLNVHTSVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGGS 63
H TL LFL L++ V+ RF+VEK+S+ + +P ++ HD+AI NFG+P YGG
Sbjct: 5 HKGATLALFLA---LTMVVNGVFGRFIVEKSSVTILNPLAMRSKHDAAIANFGVPNYGGY 61
Query: 64 MAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAV 123
M G+V Y + GC F +FK K P +++DRG+C+FALKVWN Q++G +AV
Sbjct: 62 MIGSVVYAGQGAYGCDSFDK---TFKPK-FPRPTILIIDRGECYFALKVWNGQQSGVAAV 117
Query: 124 LVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDW 183
LVAD+++E LITMD+PEE + +IE + IPSALID SF TLK+AL GE V + +DW
Sbjct: 118 LVADNVDEPLITMDSPEESKEADDFIEKLNIPSALIDFSFANTLKQALKKGEEVVLKIDW 177
Query: 184 REAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWY 243
E++PHPD+RVEYELWTN+NDECG +CD M FVK F+G AQILEKGGY+ FTPHYITW+
Sbjct: 178 SESLPHPDERVEYELWTNTNDECGARCDEQMNFVKNFKGHAQILEKGGYSLFTPHYITWF 237
Query: 244 CPMTFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPW 303
CP + S QCKSQCIN GRYCAPDPEQDF GY+GKD+V ENLRQLCV KVAKE+ + W
Sbjct: 238 CPKDYVSSNQCKSQCINQGRYCAPDPEQDFGDGYDGKDIVFENLRQLCVHKVAKENNRSW 297
Query: 304 VWWDYVTDFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQD 363
VWWDYVTDF IRC MK+KKY+KECA V++SLGL KI+KC+GDPDA+ +N VLK EQ
Sbjct: 298 VWWDYVTDFHIRCSMKEKKYSKECAERVVESLGLPLDKIKKCIGDPDANVENEVLKAEQA 357
Query: 364 AQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNEC 423
QVG+G RGDVTILPTL+VNN QYRGKLE+ AVLKAICSGF+E TEP +CLSGD+ETNEC
Sbjct: 358 LQVGQGDRGDVTILPTLIVNNAQYRGKLERNAVLKAICSGFKERTEPGICLSGDIETNEC 417
Query: 424 LDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGC 483
L+ NGGCW+DK +NVTACKDTFRGRVCECP+V+GVQ+KGDGY+ CE GP +C IN GGC
Sbjct: 418 LEANGGCWEDKKSNVTACKDTFRGRVCECPVVNGVQYKGDGYTSCEPYGPARCSINQGGC 477
Query: 484 WHESKDGHTYSACLDSENGKCQCPPGFKGDGVK 516
W E+K G T+SAC + E C+CPPGFKGDG+K
Sbjct: 478 WSETKKGLTFSACSNLETSGCRCPPGFKGDGLK 510
>sp|Q8L7E3|VSR7_ARATH Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2
SV=2
Length = 625
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/513 (61%), Positives = 400/513 (77%), Gaps = 6/513 (1%)
Query: 5 GSITLKLFLGFLILSLNVHTSV--SRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGG 62
G + + L FL+ +L + V +RFVVEK S+ V +PE+++ HD +I NFG+P YGG
Sbjct: 2 GLVNGRASLTFLLAALTIIAMVVEARFVVEKESISVLNPEEMRSKHDGSIANFGLPDYGG 61
Query: 63 SMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASA 122
+ G+V YP GC FG +FK K P +L+DRG C+FALK W+AQ+AGA+A
Sbjct: 62 FLIGSVVYPDSKTDGCSAFGK---TFKPK-FPRPTILLLDRGGCYFALKAWHAQQAGAAA 117
Query: 123 VLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLD 182
VLVAD+++E L+TMD+PEE + +IE +TIPS LIDKSFG+ L++ G+ + + LD
Sbjct: 118 VLVADNVDEPLLTMDSPEESKDADGFIEKLTIPSVLIDKSFGDDLRQGFQKGKNIVIKLD 177
Query: 183 WREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITW 242
WRE+VPHPD RVEYELWTNSNDECG +CD M FVK F+G AQILEKGGYT FTPHYITW
Sbjct: 178 WRESVPHPDKRVEYELWTNSNDECGARCDEQMDFVKNFKGHAQILEKGGYTAFTPHYITW 237
Query: 243 YCPMTFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKP 302
+CP F S CKSQCINHGRYCAPDPE +F GYEGKDVVLENLRQLCV +VA ES +P
Sbjct: 238 FCPFQFINSPHCKSQCINHGRYCAPDPEDNFREGYEGKDVVLENLRQLCVHRVANESSRP 297
Query: 303 WVWWDYVTDFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQ 362
WVWWDYVTDF RC MK+KKY+ +CA +VIKSL L +KI+KC+GDP+AD +N VL+ EQ
Sbjct: 298 WVWWDYVTDFHSRCSMKEKKYSIDCAESVIKSLNLPIEKIKKCIGDPEADTENQVLRTEQ 357
Query: 363 DAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNE 422
+Q+G+G+RGDVTILPTLV+NN QYRG+LE+ AVLKAIC+GF ET+EPA+CL+ +ETNE
Sbjct: 358 VSQIGRGNRGDVTILPTLVINNAQYRGRLERTAVLKAICAGFNETSEPAICLNTGLETNE 417
Query: 423 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGG 482
CL+NNGGCWQD AN+TAC+DTFRGR+CECP+V GVQ+KGDGY+ C GP +C +NNGG
Sbjct: 418 CLENNGGCWQDTKANITACQDTFRGRLCECPVVKGVQYKGDGYTSCTPYGPARCTMNNGG 477
Query: 483 CWHESKDGHTYSACLDSENGKCQCPPGFKGDGV 515
CW ++++G T+SAC DS + C+CP GF+GDG+
Sbjct: 478 CWSDTRNGLTFSACSDSVSTGCKCPEGFQGDGL 510
>sp|O64758|VSR5_ARATH Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2
SV=1
Length = 618
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 304/514 (59%), Positives = 388/514 (75%), Gaps = 8/514 (1%)
Query: 3 SHGSITLKLFLGFLILSLNVHTSVSRFVVEKNSLMVTSPEKIKGSHDSAIGNFGIPQYGG 62
S+ L L L ++ +N +S RF VEK+SL V + ++ HD+AI NFG+P+YGG
Sbjct: 4 SNKGTVLALILALTMVVVNGFSS--RFFVEKSSLTVLNSWEMGAKHDAAIANFGLPKYGG 61
Query: 63 SMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASA 122
M G+V Y ++ GC F +F K P +L+DRG C FALK+WN Q++GA+A
Sbjct: 62 FMIGSVVYAGQDAYGCNSFNK---TFNTK-SPYPKILLIDRGVCNFALKIWNGQQSGAAA 117
Query: 123 VLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLD 182
VL+AD+I E LITMDTP+++ +I+ + IPSALI +SFG++LKKAL GE V + +D
Sbjct: 118 VLLADNIVEPLITMDTPQDE--DPDFIDKVKIPSALILRSFGDSLKKALKRGEEVILKMD 175
Query: 183 WREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITW 242
W E++P+PD+RVEYELW N+NDECGV CD + F+K F+G AQILEKGGYT F PHYI+W
Sbjct: 176 WSESIPNPDERVEYELWANTNDECGVHCDKQIDFIKNFKGMAQILEKGGYTLFRPHYISW 235
Query: 243 YCPMTFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKP 302
CP LS+QC++QCIN GRYCA D +Q+F GY GKDVV ENLRQLCV KVAKE
Sbjct: 236 VCPKELLLSKQCRTQCINQGRYCALDTKQEFEDGYNGKDVVYENLRQLCVHKVAKEKNTS 295
Query: 303 WVWWDYVTDFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQ 362
WVWWDYVTDF IRC MK+KKY++ECA +++SLGL +KI+KC+GDPDAD +N VLK E+
Sbjct: 296 WVWWDYVTDFNIRCSMKEKKYSRECAETIVESLGLSLEKIKKCIGDPDADVENEVLKAEE 355
Query: 363 DAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSGFEETTEPAVCLSGDVETNE 422
Q+G+ +RG VTI PTL++NN QYRGKLE+ AVLKAICSGF+E TEP++CL+ D+ETNE
Sbjct: 356 AFQLGQENRGIVTIFPTLMINNAQYRGKLERTAVLKAICSGFKERTEPSICLNSDIETNE 415
Query: 423 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGG 482
CL NGGCWQDK +NVTACKDTFRGRVCECP+VDGVQ+KGDGY+ C+ GP +C +NNG
Sbjct: 416 CLIENGGCWQDKRSNVTACKDTFRGRVCECPVVDGVQYKGDGYTSCKPYGPARCSMNNGD 475
Query: 483 CWHESKDGHTYSACLDSENGKCQCPPGFKGDGVK 516
CW E++ G T+S+C DSE C+CP GF GDG+K
Sbjct: 476 CWSETRKGLTFSSCSDSETSGCRCPLGFLGDGLK 509
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R DC F +KV NAQ+AG A +V + + LI+M + + DI ++ I IPS
Sbjct: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIDI-----LKKIDIPSV 148
Query: 158 LIDKSFGETLKKALS---GGEMVNV 179
I +S +LK + GG ++ V
Sbjct: 149 FIGESSANSLKDEFTYEKGGHVILV 173
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R DC F +KV NAQ+AG A +V + + LI+M + DI + K I+ IPS
Sbjct: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGS--NDIDTLKKID---IPSV 148
Query: 158 LIDKSFGETLKKALS---GGEMVNV 179
I +S +LK + GG ++ V
Sbjct: 149 FIGESSANSLKDEFTYEKGGHIILV 173
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R DC F +KV NAQ+AG A +V + + LI+M + + ++ ++ I IPS
Sbjct: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEV-----LKKIDIPSV 148
Query: 158 LIDKSFGETLKKALS---GGEMVNV 179
I +S +LK + GG ++ V
Sbjct: 149 FIGESSANSLKDEFTYEKGGHLILV 173
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R DC F +KV NAQ+AG A +V + + LI+M + + ++ ++ I IPS
Sbjct: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEV-----LKKIDIPSV 148
Query: 158 LIDKSFGETLKKALS---GGEMVNV 179
I +S +LK + GG ++ V
Sbjct: 149 FIGESSANSLKDEFTYEKGGHLILV 173
>sp|Q8WWF5|ZNRF4_HUMAN Zinc/RING finger protein 4 OS=Homo sapiens GN=ZNRF4 PE=2 SV=3
Length = 429
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R DC F LKV NAQ+AG A +V + + L++M ED+ I IPS
Sbjct: 158 IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTHVYEDLRG-----QIAIPSV 212
Query: 158 LIDKSFGETLKKAL 171
+ ++ + L+ L
Sbjct: 213 FVSEAASQDLRVIL 226
>sp|Q4R6Y5|ZNRF4_MACFA Zinc/RING finger protein 4 OS=Macaca fascicularis GN=ZNRF4 PE=2
SV=1
Length = 429
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
L+ R DC F LKV NAQ+AG A +V + + L++M ED+ I IPS
Sbjct: 158 IALIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTHVSEDLRG-----QIAIPSV 212
Query: 158 LIDKSFGETLKKALSGGEMVNVNL 181
+ ++ + L+ L + +V L
Sbjct: 213 FVGEAASQDLRVILGCDKSAHVLL 236
>sp|Q29RU2|OIT3_BOVIN Oncoprotein-induced transcript 3 protein OS=Bos taurus GN=OIT3 PE=2
SV=1
Length = 547
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 27/116 (23%)
Query: 401 CSGFEETT-EPAVCLSGDVET----NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLV 455
C G E T P L D +T NEC NNGGC + N+ K+++R CEC +
Sbjct: 159 CLGTSECTCAPGTVLGPDRQTCFDENECEQNNGGC-SEICVNL---KNSYR---CECGI- 210
Query: 456 DGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENG-KCQCPPGF 510
G + DG + ++ G C NNGGC H +CL SE G +C+CP G
Sbjct: 211 -GRVLRSDGKTCEDIEG---CHNNNGGCSH---------SCLTSETGYQCECPRGL 253
>sp|Q8W469|SIPL2_ARATH Signal peptide peptidase-like 2 OS=Arabidopsis thaliana GN=SPPL2
PE=2 SV=1
Length = 540
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 97 NFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEE-DISSAKYIENITIP 155
+ V+V+RG+C F K NA+ AGASA+L+ ++ +E + P+E D+ +I IP
Sbjct: 106 DVVIVERGNCRFTAKANNAEAAGASALLIINNQKELYKMVCEPDETDL-------DIQIP 158
Query: 156 SALIDKSFGETLKKALSGGEMVNVNL 181
+ ++ + G +L+K L+ V+ L
Sbjct: 159 AVMLPQDAGASLQKMLANSSKVSAQL 184
>sp|O70244|CUBN_RAT Cubilin OS=Rattus norvegicus GN=Cubn PE=1 SV=2
Length = 3623
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 13/100 (13%)
Query: 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVC-ECPLVDGVQFKGDGYSHCEVSGPGKCK 477
+ NEC NNGGC Q A + C +T C CP F GDG V C
Sbjct: 302 DINECEINNGGCSQ---APLVPCLNTPGSFSCGNCP----AGFSGDGRVCTPVD---ICS 351
Query: 478 INNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKS 517
I+NGGC E+ + S L S C CPPG+ G+G S
Sbjct: 352 IHNGGCHPEAT--CSSSPVLGSFLPVCTCPPGYTGNGYGS 389
>sp|Q4V3B8|SIPL3_ARATH Signal peptide peptidase-like 3 OS=Arabidopsis thaliana GN=SPPL3
PE=2 SV=1
Length = 540
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 103 RGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKS 162
RG+C F K +A+ AGASA+LV +D +E L M E+D S N++IP +I KS
Sbjct: 113 RGNCAFTEKAKHAEAAGASALLVIND-KEDLDEMGCMEKDTS-----LNVSIPVLMISKS 166
Query: 163 FGETLKKALSGGEMVNVNL 181
G+ L K++ + V + L
Sbjct: 167 SGDALNKSMVDNKNVELLL 185
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R DC F KV NAQ+AG A +V + + LI+M + + ++ ++ I IPS
Sbjct: 94 IVLIRRLDCNFDEKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEV-----LKKIDIPSV 148
Query: 158 LIDKSFGETLKKALS---GGEMVNV 179
I +S +LK + GG ++ V
Sbjct: 149 FIGESSANSLKDEFTYEKGGHIILV 173
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
VL+ R +C F +KV NAQ+AG A +V + + LI+M + + +I ++ I IPS
Sbjct: 94 IVLIRRLECNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEI-----LKKIDIPSV 148
Query: 158 LIDKSFGETLKKALS---GGEMV 177
I ++ +LK+ + GG +V
Sbjct: 149 FIGEASANSLKEEFTYEKGGHVV 171
>sp|Q8WWZ8|OIT3_HUMAN Oncoprotein-induced transcript 3 protein OS=Homo sapiens GN=OIT3
PE=1 SV=2
Length = 545
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 26/111 (23%)
Query: 405 EETTEPAVCLSGDVET----NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQF 460
E T P L D +T NEC NNGGC + N+ K+++R CEC + G
Sbjct: 164 ECTCAPGTVLGPDRQTCFDENECEQNNGGC-SEICVNL---KNSYR---CECGV--GRVL 214
Query: 461 KGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENG-KCQCPPGF 510
+ DG + +V G C NNGGC H +CL SE G +C+CP G
Sbjct: 215 RSDGKTCEDVEG---CHNNNGGCSH---------SCLGSEKGYQCECPRGL 253
>sp|Q53P98|SIPL2_ORYSJ Signal peptide peptidase-like 2 OS=Oryza sativa subsp. japonica
GN=SPPL2 PE=2 SV=1
Length = 534
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 95 LPNFV-LVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENIT 153
L N++ + RG+C F K AQ GA +LV +D EE L M + D S N+T
Sbjct: 104 LTNYIAIAQRGECAFTAKAKIAQTGGAVGLLVINDNEE-LYKMVCSDNDTSI-----NVT 157
Query: 154 IPSALIDKSFGETLKKALSGGEMVNVNL 181
IP +I +S G+ +K L G + V L
Sbjct: 158 IPVVMIPQSAGKKMKGLLDQGARLEVQL 185
>sp|Q5XIL0|RN167_RAT E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus GN=Rnf167
PE=2 SV=1
Length = 349
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 100 LVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALI 159
L+ R DC F LKV NAQKAG A +V + L+ M E+I + I IPS I
Sbjct: 86 LLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQ-----QQIWIPSVFI 140
Query: 160 DKSFGETLK 168
+ E L+
Sbjct: 141 GERSAEYLR 149
>sp|Q91XF4|RN167_MOUSE E3 ubiquitin-protein ligase RNF167 OS=Mus musculus GN=Rnf167 PE=2
SV=1
Length = 347
Score = 40.8 bits (94), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 100 LVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALI 159
L+ R DC F LKV NAQKAG A +V + L+ M E+I + I IPS I
Sbjct: 86 LLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQ-----QQIWIPSVFI 140
Query: 160 DKSFGETLK 168
+ E L+
Sbjct: 141 GERSAEYLR 149
>sp|Q9H6Y7|RN167_HUMAN E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens GN=RNF167 PE=1
SV=1
Length = 350
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 100 LVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALI 159
L+ R DC F LKV NAQKAG A +V + L+ M E+I + I IPS I
Sbjct: 86 LLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQ-----QQIWIPSVFI 140
Query: 160 DKSFGETLK 168
+ E L+
Sbjct: 141 GERSSEYLR 149
>sp|Q9JLB4|CUBN_MOUSE Cubilin OS=Mus musculus GN=Cubn PE=1 SV=3
Length = 3623
Score = 40.4 bits (93), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 45/106 (42%), Gaps = 25/106 (23%)
Query: 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVC-ECPLVDGVQFKGDGYSHCEVSGP-GKC 476
+ NEC NNGGC Q A + C +T C CP F GDG V P C
Sbjct: 302 DINECEINNGGCSQ---APLVPCLNTPGSFTCGNCP----AGFSGDG----RVCTPLDIC 350
Query: 477 KINNGGCWHESKDGHTYSACLDSENGK-----CQCPPGFKGDGVKS 517
I+NGGC H + C S C CPPG+ G+G S
Sbjct: 351 SIHNGGC-------HPDATCSSSSVLGSLLPVCTCPPGYTGNGYGS 389
>sp|Q9NY15|STAB1_HUMAN Stabilin-1 OS=Homo sapiens GN=STAB1 PE=1 SV=3
Length = 2570
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 42/100 (42%), Gaps = 21/100 (21%)
Query: 418 VETNEC-LDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKC 476
V +EC LD GGC D + + C C L F GDGY + S C
Sbjct: 903 VAIDECELDMRGGCHTDALCSYVGPGQS----RCTCKL----GFAGDGY---QCSPIDPC 951
Query: 477 KINNGGCWHESKDGHTYSACLDSENGK--CQCPPGFKGDG 514
+ NGGC H + C G+ C CPPGF GDG
Sbjct: 952 RAGNGGC-------HGLATCRAVGGGQRVCTCPPGFGGDG 984
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKI 478
E + C +GGC AN T K R C C DG + GDG E++ C I
Sbjct: 1455 EVDPCAHGHGGC--SPHANCT--KVAPGQRTCTC--QDG--YMGDGELCQEIN---SCLI 1503
Query: 479 NNGGCWHESKDGHTYSACLDS--ENGKCQCPPGFKGDGVKSCILMN 522
++GGC H ++ C+ + + C C G+ GDG+++C L++
Sbjct: 1504 HHGGC-------HIHAECIPTGPQQVSCSCREGYSGDGIRTCELLD 1542
>sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN=Lama5 PE=1 SV=4
Length = 3718
Score = 40.0 bits (92), Expect = 0.049, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 35/92 (38%), Gaps = 20/92 (21%)
Query: 429 GCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESK 488
C +D CK FRG CE + F G C+ S PG + N C
Sbjct: 511 ACRKDPRLGRCVCKPNFRGAHCE---LCAPGFHGPSCHPCQCSSPG---VANSLC----- 559
Query: 489 DGHTYSACLDSENGKCQCPPGFKGDGVKSCIL 520
D E+G+C C GF+GD C L
Sbjct: 560 ---------DPESGQCMCRTGFEGDRCDHCAL 582
Score = 34.3 bits (77), Expect = 2.8, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 37/104 (35%), Gaps = 16/104 (15%)
Query: 421 NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE--VSGPGKCKI 478
+ CL+ G Q + AC +G C G HC+ +GP +C
Sbjct: 2054 DRCLEGYFGFEQCQGCRPCACGPAAKGSECH---------PQSGQCHCQPGTTGP-QCLE 2103
Query: 479 NNGGCWHESKDGHTYSAC----LDSENGKCQCPPGFKGDGVKSC 518
G W + G C D G C CPPG G+ +C
Sbjct: 2104 CAPGYWGLPEKGCRRCQCPRGHCDPHTGHCTCPPGLSGERCDTC 2147
Score = 33.5 bits (75), Expect = 4.3, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 45/132 (34%), Gaps = 38/132 (28%)
Query: 393 KGAVLKAICSGFE-ETTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCE 451
+GA + GF + P C S V + C +G C C+ F G C+
Sbjct: 528 RGAHCELCAPGFHGPSCHPCQCSSPGVANSLCDPESGQC---------MCRTGFEGDRCD 578
Query: 452 -CPLVDGVQFKGDGYSH---CEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCP 507
C L GY H C++ G GC E G+CQC
Sbjct: 579 HCAL---------GYFHFPLCQLCGCSPAGTLPEGC---------------DEAGRCQCR 614
Query: 508 PGFKGDGVKSCI 519
PGF G C+
Sbjct: 615 PGFDGPHCDRCL 626
>sp|Q5N808|SIPL3_ORYSJ Signal peptide peptidase-like 3 OS=Oryza sativa subsp. japonica
GN=SPPL3 PE=2 SV=1
Length = 523
Score = 39.7 bits (91), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 97 NFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPS 156
+ + +RG+C F K A+ GA+A+L+ +D E+ L M + D + NI IP
Sbjct: 116 SIAVAERGECTFLEKAKTAESGGAAALLLIND-EDDLQKMVCTQNDT-----VPNIGIPV 169
Query: 157 ALIDKSFGETLKKALSGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAF 216
++ +S G + + GG V++ L + P D + + LW + V C + +F
Sbjct: 170 VMVSQSAGRKILSGMDGGAKVDI-LMYAPEKPSFDGAIPF-LWLMAVGS--VACASVWSF 225
Query: 217 V 217
V
Sbjct: 226 V 226
>sp|Q8R4Y4|STAB1_MOUSE Stabilin-1 OS=Mus musculus GN=Stab1 PE=1 SV=1
Length = 2571
Score = 39.3 bits (90), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 49/129 (37%), Gaps = 40/129 (31%)
Query: 408 TEPAVCLSGDVETNEC--------------------LDNNGGCWQDKTANVTACKDTFRG 447
+E A C+ GD+ T+ C LD GGC D + +
Sbjct: 875 SENAECVPGDLGTHHCICHKGWSGDGRICVAIDECGLDTRGGCHADALCSYVGPGQS--- 931
Query: 448 RVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGK--CQ 505
C C L F G+GY E S C++ NGGC H + C G+ C
Sbjct: 932 -RCTCKL----GFAGNGY---ECSPIDPCRVGNGGC-------HGLATCKAVGGGQRVCT 976
Query: 506 CPPGFKGDG 514
CPP F GDG
Sbjct: 977 CPPHFGGDG 985
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 20/106 (18%)
Query: 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKI 478
E + C +GGC AN T K R C C DG + GDG E++ C +
Sbjct: 1456 EVDPCASGHGGC--SPYANCT--KVAPGQRTCTC--QDG--YTGDGELCQEIN---SCLV 1504
Query: 479 NNGGCWHESKDGHTYSACLDS--ENGKCQCPPGFKGDGVKSCILMN 522
+NGGC H ++ C+ + + C C G+ GDG+++C L++
Sbjct: 1505 HNGGC-------HVHAECIPTGPQQVSCSCREGYSGDGIQTCKLLD 1543
>sp|Q6V0K7|OIT3_RAT Oncoprotein-induced transcript 3 protein OS=Rattus norvegicus
GN=Oit3 PE=2 SV=1
Length = 546
Score = 38.9 bits (89), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 30/114 (26%)
Query: 406 ETTE----PAVCLSGDVET----NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDG 457
+TTE P L D +T NEC NNGGC + C + C C + G
Sbjct: 161 DTTECACSPGTSLGPDGQTCFDENECEHNNGGCSE-------ICVNLKNSHRCACGV--G 211
Query: 458 VQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENG-KCQCPPGF 510
+ DG + ++ G C NNGGC H +CL SE G +C+CP G
Sbjct: 212 RVLRSDGKTCEDIEG---CHSNNGGCSH---------SCLGSEKGYQCECPRGL 253
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 44 IKGSHDSAIGNFGIPQYGGSMAGAVTYPKE--NRKGCREFGDF---GISFKAKPG----- 93
+ GS +S G +G S+ G V YP++ +GC + G S A G
Sbjct: 43 VTGSTES--GRYGDSSPKESVKGFVGYPRDPWQLEGCHPDTQYIVPGTSAAAAAGPDSEW 100
Query: 94 ALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADD 128
P LV RG C F KV+NA GASAV++ ++
Sbjct: 101 TQPWIALVARGGCTFKEKVFNAANRGASAVVIYNE 135
>sp|Q8R4V5|OIT3_MOUSE Oncoprotein-induced transcript 3 protein OS=Mus musculus GN=Oit3
PE=2 SV=2
Length = 546
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 30/114 (26%)
Query: 406 ETTE----PAVCLSGDVET----NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDG 457
+TTE P L D +T NEC NNGGC + C + C C + G
Sbjct: 161 DTTECACSPGTSLGPDGQTCFDENECEHNNGGCSE-------ICVNLKNSHRCACGV--G 211
Query: 458 VQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENG-KCQCPPGF 510
+ DG + ++ G C NNGGC H +CL SE G +C+CP G
Sbjct: 212 RVLRSDGKTCEDIEG---CHNNNGGCSH---------SCLGSEEGYQCECPRGL 253
>sp|Q5Z413|SIPL5_ORYSJ Signal peptide peptidase-like 5 OS=Oryza sativa subsp. japonica
GN=SPPL5 PE=2 SV=1
Length = 542
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 97 NFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEAL-ITMDTPEEDISSAKYIENITIP 155
+ +LV RG C F K A+ AGAS +++ + + E + + E D+ +I IP
Sbjct: 102 DILLVQRGKCKFTKKAKFAEAAGASGIIIINHVHELYKMVCEKNETDL-------DINIP 154
Query: 156 SALIDKSFGETLKKALSGGEMVNVN 180
+ L+ + G L L+ G V+V
Sbjct: 155 AVLLPRDAGFALHTVLTSGNSVSVQ 179
>sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3
OS=Xenopus laevis GN=edem3 PE=2 SV=2
Length = 913
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
L+ RG C FA K N QKAGA +V DD E + + K +++TIP
Sbjct: 693 IALMQRGQCMFAEKARNVQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKSTDDVTIPML 752
Query: 158 LIDKSFGETLKKALSGGEMVNVNL 181
+ G + A+ + V V L
Sbjct: 753 FLFSKEGNIILDAIREYQQVEVLL 776
>sp|Q0WMJ8|SIPL4_ARATH Signal peptide peptidase-like 4 OS=Arabidopsis thaliana GN=SPPL4
PE=2 SV=1
Length = 540
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 99 VLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSAL 158
+LV RG C F K A+ AGASA+L+ ++ + D + + + +ITIP +
Sbjct: 107 ILVHRGKCSFTTKTKVAEAAGASAILIINN------STDLFKMVCEKGENVLDITIPVVM 160
Query: 159 IDKSFGETLKKALSGGEMVNVNL 181
+ G +L+ + +V + L
Sbjct: 161 LPVDAGRSLENIVKSNAIVTLQL 183
>sp|Q8IWY4|SCUB1_HUMAN Signal peptide, CUB and EGF-like domain-containing protein 1
OS=Homo sapiens GN=SCUBE1 PE=1 SV=3
Length = 988
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 423 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGG 482
C NNGGC D+T CKDT G C CP+ G + DG + +++ +C +NNGG
Sbjct: 245 CAVNNGGC--DRT-----CKDTATGVRCSCPV--GFTLQPDGKTCKDIN---ECLVNNGG 292
Query: 483 CWH 485
C H
Sbjct: 293 CDH 295
>sp|Q6NZL8|SCUB1_MOUSE Signal peptide, CUB and EGF-like domain-containing protein 1 OS=Mus
musculus GN=Scube1 PE=2 SV=2
Length = 1018
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 12/63 (19%)
Query: 423 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGG 482
C NNGGC D+T CKDT G C CP+ G + DG + +++ +C +NNGG
Sbjct: 275 CAVNNGGC--DRT-----CKDTATGVRCSCPV--GFTLQPDGKTCKDIN---ECLMNNGG 322
Query: 483 CWH 485
C H
Sbjct: 323 CDH 325
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 42/96 (43%), Gaps = 26/96 (27%)
Query: 420 TNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKIN 479
TNECLDNNGGC C D G C CP DG Q CE I+
Sbjct: 315 TNECLDNNGGCSH-------VCNDLKIGYECLCP--DGFQLVAQ--RRCE-------DID 356
Query: 480 NGGCWHESKDGHTYSA-CLDSENG-KCQCPPGFKGD 513
E +D T S C++ E G KCQC GF+ D
Sbjct: 357 ------ECQDPDTCSQLCVNLEGGYKCQCEEGFQLD 386
>sp|Q80V70|MEGF6_MOUSE Multiple epidermal growth factor-like domains protein 6 OS=Mus
musculus GN=Megf6 PE=2 SV=3
Length = 1572
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 32/132 (24%)
Query: 400 ICSGFEETTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQ 459
C G+ + CLS + +EC + NGGC C +T G C CP G Q
Sbjct: 106 CCPGWSQKPGQEGCLS---DVDECANANGGC-------EGPCCNTVGGFYCRCP--PGYQ 153
Query: 460 FKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGK-CQCPPGFK--GDG-- 514
+GDG + +V +C+ +NGGC H C+++ C+C PGF+ DG
Sbjct: 154 LQGDGKTCQDVD---ECRSHNGGCQHR---------CVNTPGSYLCECKPGFRLHTDGRT 201
Query: 515 ---VKSCILMNA 523
+ SC L N
Sbjct: 202 CLAISSCTLGNG 213
>sp|O88281|MEGF6_RAT Multiple epidermal growth factor-like domains protein 6 OS=Rattus
norvegicus GN=Megf6 PE=1 SV=1
Length = 1574
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 32/132 (24%)
Query: 400 ICSGFEETTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQ 459
C G+ + CLS + +EC NGGC C +T G C CP G Q
Sbjct: 107 CCPGWSQKPGQEGCLS---DVDECASANGGC-------EGPCCNTVGGFYCRCP--PGYQ 154
Query: 460 FKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGK-CQCPPGFK--GDG-- 514
+GDG + +V +C+ +NGGC H C+++ C+C PGF+ DG
Sbjct: 155 LQGDGKTCQDVD---ECRAHNGGCQHR---------CVNTPGSYLCECKPGFRLHTDGRT 202
Query: 515 ---VKSCILMNA 523
+ SC L N
Sbjct: 203 CLAISSCTLGNG 214
>sp|Q8R4U0|STAB2_MOUSE Stabilin-2 OS=Mus musculus GN=Stab2 PE=1 SV=1
Length = 2559
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 407 TTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYS 466
T + VCL E N CL+N+GGC D+ A T + VC C ++ GDG
Sbjct: 1512 TGDGIVCL----EINPCLENHGGC--DRHAECT--QTGPNQAVCNCL----PKYTGDGKV 1559
Query: 467 HCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGV 515
++ C NNGGC + HT + + C C P + GDG+
Sbjct: 1560 CTLIN---VCLTNNGGCSPFAFCNHT-----EQDQRTCTCKPDYTGDGI 1600
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 35.8 bits (81), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 11/47 (23%)
Query: 417 DVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECP----LVDGVQ 459
+ +TNECLDNNGGC CKD G C CP LVDG Q
Sbjct: 313 ECKTNECLDNNGGCSH-------ICKDLKIGYECLCPSGFRLVDGHQ 352
>sp|O15230|LAMA5_HUMAN Laminin subunit alpha-5 OS=Homo sapiens GN=LAMA5 PE=1 SV=8
Length = 3695
Score = 35.8 bits (81), Expect = 1.0, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 9/79 (11%)
Query: 448 RVCEC-PLVDGVQ-FKGDGYSHCE--VSGPGKCKINNGGCWHESKDGHTYSAC----LDS 499
R C C P +G + G HC GP +C+ G W + G C D
Sbjct: 2068 RPCACGPAAEGSECHPQSGQCHCRPGTMGP-QCRECAPGYWGLPEQGCRRCQCPGGRCDP 2126
Query: 500 ENGKCQCPPGFKGDGVKSC 518
G+C CPPG G+ +C
Sbjct: 2127 HTGRCNCPPGLSGERCDTC 2145
Score = 33.5 bits (75), Expect = 4.2, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 34/90 (37%), Gaps = 20/90 (22%)
Query: 429 GCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESK 488
C +D CK F+G CE + F G G C+ S PG + + C
Sbjct: 505 ACRKDPRVGRCLCKPNFQGTHCE---LCAPGFYGPGCQPCQCSSPG---VADDRC----- 553
Query: 489 DGHTYSACLDSENGKCQCPPGFKGDGVKSC 518
D + G+C+C GF+G C
Sbjct: 554 ---------DPDTGQCRCRVGFEGATCDRC 574
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 421 NECLD----NNGGCWQDKTANVT-ACKDTFRGRVCECPLVDGVQ-------------FKG 462
N CL NNG C QD C +++G+ C P+ VQ
Sbjct: 918 NACLSSPCKNNGTCSQDPVEQYRCTCPYSYKGKDCTVPINTCVQNPCQHGGTCHLSESHR 977
Query: 463 DGYS-HCEVSGPG-KCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGD 513
DG+S C + G +C+IN C E D + C+D N C CPP + G+
Sbjct: 978 DGFSCSCPLGFEGQRCEINPDDC--EDNDCENSATCVDGINNYACVCPPNYTGE 1029
>sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like domain-containing protein 2
OS=Danio rerio GN=scube2 PE=2 SV=1
Length = 1010
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 12/67 (17%)
Query: 423 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGG 482
C NNGGC D T CKDT G C CP+ G + DG S ++ +C+++NGG
Sbjct: 269 CAVNNGGC--DST-----CKDTSTGVRCSCPV--GFTLQPDGKSCKDID---ECELHNGG 316
Query: 483 CWHESKD 489
C H ++
Sbjct: 317 CDHYCRN 323
>sp|Q8CFM6|STAB2_RAT Stabilin-2 (Fragment) OS=Rattus norvegicus GN=Stab2 PE=1 SV=1
Length = 1431
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 67/181 (37%), Gaps = 41/181 (22%)
Query: 344 KCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKGAVLKAICSG 403
C+ DPD A + G RG+ T+ + G KA C
Sbjct: 309 NCLLDPDGKAS---------CKCAAGFRGNGTVCTAINACETS-----NGGCSTKADCKR 354
Query: 404 FEETTEPAVCLSGD-------VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVD 456
VC +G +E N CL+N+GGC D+ A T + VC C
Sbjct: 355 TTPGNRVCVCKAGYTGDGIVCLEINPCLENHGGC--DRNAECT--QTGPNQAVCNCL--- 407
Query: 457 GVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGK--CQCPPGFKGDG 514
++ GDG S C NNGGC ++ C +E + C C P + GDG
Sbjct: 408 -PKYTGDGKV---CSLINVCLTNNGGC-------SPFAFCNYTEQDQRICTCKPDYTGDG 456
Query: 515 V 515
+
Sbjct: 457 I 457
>sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus
musculus GN=Edem3 PE=1 SV=2
Length = 931
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 35/84 (41%)
Query: 98 FVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSA 157
L+ RG C FA K N Q AGA +V DD E + + K ++I IP
Sbjct: 707 IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPML 766
Query: 158 LIDKSFGETLKKALSGGEMVNVNL 181
+ G + A+ E V V L
Sbjct: 767 FLFSKEGSIILDAIREHEQVEVLL 790
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 421 NECLD----NNGGCWQDKTANVT-ACKDTFRGRVCECPLVDGVQFK-------------G 462
N CL NNG C QD C +++G+ C P+ VQ
Sbjct: 918 NACLSSPCKNNGTCSQDPVEQYRCTCPYSYKGKDCTVPINTCVQNPCEHGGTCHLSENLR 977
Query: 463 DGYS-HCEVSGPG-KCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGD 513
DG+S C + G +C+IN C E D + C+D N C CPP + G+
Sbjct: 978 DGFSCSCPLGFEGQRCEINPDDC--EDNDCENSATCVDGINNYACLCPPNYTGE 1029
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 40/102 (39%), Gaps = 32/102 (31%)
Query: 417 DVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECP----LVDGVQFKGDGYSHCEVSG 472
D TNECLDNNGGC CKD G C CP LVD Q + + C+
Sbjct: 313 DCRTNECLDNNGGCSH-------VCKDLKIGYECLCPNGFQLVD--QHRCEDIDECQ--E 361
Query: 473 PGKCKINNGGCWHESKDGHTYSACLDSENG-KCQCPPGFKGD 513
P C C++ E KC+C GF D
Sbjct: 362 PDTCD----------------QLCVNLEGSYKCECRAGFHMD 387
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,687,498
Number of Sequences: 539616
Number of extensions: 10438853
Number of successful extensions: 23586
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 22293
Number of HSP's gapped (non-prelim): 1319
length of query: 560
length of database: 191,569,459
effective HSP length: 123
effective length of query: 437
effective length of database: 125,196,691
effective search space: 54710953967
effective search space used: 54710953967
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)