Query 008587
Match_columns 560
No_of_seqs 401 out of 2618
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 07:02:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008587.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008587hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3icu_A E3 ubiquitin-protein li 99.9 4.3E-23 1.5E-27 196.3 18.4 149 25-183 26-185 (194)
2 3iib_A Peptidase M28; YP_92679 99.3 5.4E-11 1.9E-15 128.0 15.9 193 48-307 90-301 (444)
3 1emn_A Fibrillin; extracellula 99.2 1.7E-11 6E-16 100.8 6.8 80 416-518 1-81 (82)
4 2vj3_A Neurogenic locus notch 99.2 3E-11 1E-15 108.8 8.5 99 417-542 2-104 (135)
5 2ek8_A Aminopeptidase; metallo 99.2 3.6E-10 1.2E-14 120.8 16.7 177 61-307 90-270 (421)
6 1x7a_L Coagulation factor IX, 99.2 4.9E-11 1.7E-15 109.0 7.7 97 416-542 44-144 (146)
7 1lmj_A Fibrillin 1; EGF, calci 99.1 3.1E-11 1.1E-15 100.1 5.4 74 419-513 2-79 (86)
8 1yo8_A Thrombospondin-2; EGF, 99.1 2.2E-10 7.5E-15 127.1 11.2 110 397-531 25-161 (634)
9 2bou_A EGF-like module contain 99.1 8.4E-11 2.9E-15 106.8 6.4 110 397-525 19-143 (143)
10 1yo8_A Thrombospondin-2; EGF, 99.1 8.8E-11 3E-15 130.2 6.4 104 418-539 1-122 (634)
11 1dx5_I Thrombomodulin; serine 99.0 2.8E-11 9.5E-16 106.6 0.1 95 418-542 2-100 (118)
12 1z6c_A Vitamin K-dependent pro 99.0 1.6E-10 5.6E-15 96.0 3.6 80 418-522 1-87 (87)
13 2bou_A EGF-like module contain 99.0 1.2E-10 4.1E-15 105.7 2.9 92 434-542 8-119 (143)
14 1z1y_A Ookinete surface protei 99.0 1.1E-10 3.9E-15 110.6 2.1 118 395-542 23-160 (186)
15 2w2n_E LDL receptor, low-densi 99.0 1.2E-10 4.2E-15 100.7 2.0 71 419-513 28-100 (107)
16 3fed_A Glutamate carboxypeptid 99.0 1.4E-09 4.9E-14 122.5 10.8 106 61-173 124-268 (707)
17 1aut_L Activated protein C; se 98.9 5E-10 1.7E-14 97.9 4.8 89 417-523 3-97 (114)
18 1uzk_A Fibrillin-1; glycoprote 98.9 1.5E-10 5E-15 107.5 -0.6 105 418-543 1-145 (162)
19 3kas_A Transferrin receptor pr 98.9 5.4E-09 1.8E-13 116.7 10.8 171 62-293 106-316 (640)
20 2w86_A Fibrillin-1, fibrillin1 98.8 2.2E-10 7.4E-15 104.6 -2.4 105 418-543 2-130 (147)
21 3v65_B Low-density lipoprotein 98.8 1E-09 3.5E-14 115.7 1.9 81 418-523 1-86 (386)
22 3p5b_L Low density lipoprotein 98.8 6.9E-09 2.3E-13 109.9 7.7 80 421-524 1-83 (400)
23 1nfu_B Coagulation factor XA, 98.8 1.3E-09 4.5E-14 104.1 1.9 88 416-527 38-130 (195)
24 2c4f_L Coagulation factor VII 98.8 3.8E-09 1.3E-13 95.9 4.8 81 417-523 44-132 (142)
25 3h5c_B Vitamin K-dependent pro 98.8 8.6E-09 2.9E-13 105.6 8.0 114 418-558 3-125 (317)
26 2vj3_A Neurogenic locus notch 98.7 1.7E-08 5.7E-13 90.7 6.7 97 396-527 27-127 (135)
27 4d90_A EGF-like repeat and dis 98.7 9.6E-09 3.3E-13 92.8 4.9 88 435-542 8-118 (143)
28 1emn_A Fibrillin; extracellula 98.7 8.8E-09 3E-13 84.5 3.1 64 468-543 2-66 (82)
29 2vh0_B Activated factor XA lig 98.6 4.7E-09 1.6E-13 94.4 1.0 84 416-523 38-124 (134)
30 1z1y_A Ookinete surface protei 98.6 1.3E-08 4.5E-13 96.3 1.5 87 439-542 16-116 (186)
31 3m0c_C LDL receptor, low-densi 98.5 5.1E-08 1.7E-12 111.9 6.2 82 419-525 311-396 (791)
32 4d90_A EGF-like repeat and dis 98.5 2.9E-07 9.9E-12 83.0 7.9 63 434-514 59-130 (143)
33 2w2n_E LDL receptor, low-densi 98.4 4.1E-08 1.4E-12 84.7 1.1 68 459-543 21-90 (107)
34 1n7d_A LDL receptor, low-densi 98.4 2.5E-07 8.6E-12 104.9 5.9 82 419-524 293-377 (699)
35 1uzk_A Fibrillin-1; glycoprote 98.4 6.4E-08 2.2E-12 89.5 0.7 101 395-513 22-155 (162)
36 1dx5_I Thrombomodulin; serine 98.4 5.6E-08 1.9E-12 85.3 0.2 85 396-514 23-112 (118)
37 1lmj_A Fibrillin 1; EGF, calci 98.3 8.2E-08 2.8E-12 79.3 -0.2 62 470-542 2-68 (86)
38 1z6c_A Vitamin K-dependent pro 98.2 2.2E-07 7.5E-12 76.9 0.8 61 470-543 2-65 (87)
39 1kli_L Factor VIIA; extrinsic 98.2 3.7E-07 1.3E-11 72.2 1.3 47 468-526 2-52 (69)
40 2jkh_L Factor X light chain; p 98.1 6E-07 2.1E-11 67.7 1.4 44 474-527 2-48 (55)
41 2w86_A Fibrillin-1, fibrillin1 98.1 2.9E-07 9.8E-12 83.7 -1.2 52 448-514 88-141 (147)
42 1kli_L Factor VIIA; extrinsic 98.1 2.4E-06 8.1E-11 67.6 4.1 46 418-477 3-51 (69)
43 3p5b_L Low density lipoprotein 98.0 3E-06 1E-10 89.5 4.3 58 474-542 1-60 (400)
44 3i6s_A Subtilisin-like proteas 98.0 8.5E-06 2.9E-10 91.4 8.0 97 67-183 260-356 (649)
45 2jkh_L Factor X light chain; p 98.0 3.8E-06 1.3E-10 63.3 3.3 43 421-477 2-46 (55)
46 1n7d_A LDL receptor, low-densi 97.9 1.1E-05 3.7E-10 91.5 8.0 85 439-542 266-354 (699)
47 1kig_L Factor XA; glycoprotein 97.9 3.7E-06 1.3E-10 62.4 2.1 40 476-525 1-43 (51)
48 3v65_B Low-density lipoprotein 97.9 1.8E-06 6.2E-11 90.6 0.3 59 474-543 4-65 (386)
49 1tpg_A T-plasminogen activator 97.9 8.3E-06 2.8E-10 68.0 3.9 62 439-523 23-90 (91)
50 2bz6_L Blood coagulation facto 97.8 4.3E-06 1.5E-10 62.5 1.1 41 476-526 2-46 (53)
51 3m0c_C LDL receptor, low-densi 97.8 1.1E-05 3.7E-10 92.6 4.8 86 439-543 284-373 (791)
52 1x7a_L Coagulation factor IX, 97.7 2.1E-05 7.3E-10 71.4 4.1 61 468-543 45-108 (146)
53 1xf1_A C5A peptidase, SCP; hyd 97.6 0.00012 4.2E-09 85.3 10.4 65 93-169 278-343 (926)
54 1y9z_A Alkaline serine proteas 97.6 7.4E-05 2.5E-09 80.0 7.8 77 92-180 270-355 (441)
55 1kig_L Factor XA; glycoprotein 97.5 3.7E-05 1.3E-09 56.9 2.8 41 423-477 1-43 (51)
56 1gl4_A Nidogen-1, entactin; im 97.4 1.6E-05 5.6E-10 79.4 -0.4 48 469-526 3-51 (285)
57 1apq_A Complement protease C1R 97.4 0.00011 3.7E-09 54.4 4.3 41 418-470 2-52 (53)
58 1gl4_A Nidogen-1, entactin; im 97.4 1.6E-05 5.5E-10 79.4 -0.8 54 418-483 3-56 (285)
59 2bz6_L Blood coagulation facto 97.4 9.3E-05 3.2E-09 55.2 3.5 41 423-477 2-45 (53)
60 3h5c_B Vitamin K-dependent pro 97.2 0.00021 7.1E-09 72.7 4.9 57 474-543 6-66 (317)
61 1n1i_A Merozoite surface prote 97.2 0.00054 1.9E-08 57.6 6.3 66 436-515 19-91 (105)
62 2kl7_A Fibulin-4; secreted, ca 97.2 0.00023 7.9E-09 56.4 3.7 37 418-462 1-37 (71)
63 2wph_E Coagulation factor IXA 97.2 0.00036 1.2E-08 53.2 4.4 37 423-471 2-41 (59)
64 1tpg_A T-plasminogen activator 97.2 5E-05 1.7E-09 63.2 -0.4 62 447-539 1-66 (91)
65 1aut_L Activated protein C; se 97.1 0.00016 5.3E-09 62.6 2.1 62 468-542 3-75 (114)
66 2wph_E Coagulation factor IXA 97.1 0.00036 1.2E-08 53.2 3.7 39 476-524 2-44 (59)
67 2kl7_A Fibulin-4; secreted, ca 97.0 0.00025 8.7E-09 56.1 2.3 36 470-514 2-39 (71)
68 1nfu_B Coagulation factor XA, 97.0 6.9E-05 2.4E-09 71.3 -1.4 60 468-542 39-102 (195)
69 1ob1_C Major merozoite surface 96.9 0.00089 3E-08 56.0 5.1 68 436-515 13-90 (99)
70 1apq_A Complement protease C1R 96.9 0.00032 1.1E-08 51.8 1.9 39 470-520 3-52 (53)
71 2vh0_B Activated factor XA lig 96.8 0.00011 3.8E-09 65.5 -1.4 60 468-542 39-102 (134)
72 4fbr_A Lectin, myxobacterial h 96.8 2.8E-05 9.7E-10 77.2 -6.2 73 436-527 41-143 (267)
73 4fbr_A Lectin, myxobacterial h 96.6 2.8E-05 9.5E-10 77.2 -7.6 81 432-527 104-210 (267)
74 1edm_B Factor IX; epidermal gr 96.5 0.0016 5.6E-08 44.8 3.0 35 419-464 2-36 (39)
75 2k2s_B Micronemal protein 6; m 96.4 0.00038 1.3E-08 53.4 -0.9 45 468-526 8-56 (61)
76 3f1s_B Vitamin K-dependent pro 96.4 0.003 1E-07 63.1 5.5 65 474-548 3-70 (283)
77 2vj2_A Jagged-1; signalling, p 96.2 0.0016 5.5E-08 60.2 2.3 56 439-514 108-166 (169)
78 2c4f_L Coagulation factor VII 96.2 0.0012 4E-08 59.4 1.1 60 468-542 44-110 (142)
79 2k2s_B Micronemal protein 6; m 96.0 0.0014 4.9E-08 50.2 0.8 45 417-477 8-55 (61)
80 2vj2_A Jagged-1; signalling, p 95.9 0.0015 5.2E-08 60.4 0.6 75 439-542 77-154 (169)
81 1edm_B Factor IX; epidermal gr 95.8 0.0045 1.5E-07 42.5 2.4 31 474-513 4-35 (39)
82 1szb_A Mannose binding lectin- 95.7 0.0041 1.4E-07 57.3 2.6 50 459-522 114-169 (170)
83 3u7u_G Neuregulin 1; signaling 95.7 0.0056 1.9E-07 45.8 2.8 39 418-470 6-49 (55)
84 1szb_A Mannose binding lectin- 95.7 0.006 2E-07 56.2 3.6 43 417-471 121-168 (170)
85 3f1s_B Vitamin K-dependent pro 95.3 0.0077 2.6E-07 60.1 3.2 45 419-477 1-48 (283)
86 1egf_A Epidermal growth factor 95.2 0.0093 3.2E-07 44.1 2.6 40 419-470 2-44 (53)
87 1g1s_A P-selectin; selectin, l 95.0 0.007 2.4E-07 55.0 1.6 28 496-526 133-161 (162)
88 1a3p_A Epidermal growth factor 94.9 0.022 7.4E-07 40.5 3.7 33 481-523 9-45 (45)
89 1egf_A Epidermal growth factor 94.9 0.025 8.6E-07 41.7 4.1 33 474-513 4-40 (53)
90 1hae_A Heregulin-alpha; growth 94.8 0.013 4.3E-07 44.9 2.4 42 474-527 7-55 (63)
91 3v64_C Agrin; beta propeller, 94.6 0.013 4.6E-07 60.1 2.5 39 420-471 1-41 (349)
92 3u7u_G Neuregulin 1; signaling 94.3 0.03 1E-06 41.8 3.3 35 469-514 6-46 (55)
93 3v64_C Agrin; beta propeller, 94.1 0.016 5.6E-07 59.4 2.1 39 474-523 2-43 (349)
94 1hae_A Heregulin-alpha; growth 94.1 0.028 9.7E-07 42.9 2.8 35 435-478 14-54 (63)
95 1g1s_A P-selectin; selectin, l 93.9 0.029 9.8E-07 50.8 3.1 33 436-477 128-160 (162)
96 1k36_A Epiregulin; EGF-like fo 93.5 0.045 1.5E-06 39.2 2.8 38 419-469 2-42 (46)
97 1a3p_A Epidermal growth factor 93.4 0.046 1.6E-06 38.8 2.7 28 435-469 11-40 (45)
98 3fcs_B Integrin beta-3; beta p 93.3 0.034 1.2E-06 62.5 2.9 77 430-526 437-530 (690)
99 3fcs_B Integrin beta-3; beta p 93.2 0.11 3.9E-06 58.2 6.9 56 436-514 537-597 (690)
100 1nzi_A Complement C1S componen 92.6 0.072 2.5E-06 48.0 3.5 42 417-470 114-158 (159)
101 2ygq_A WIF-1, WNT inhibitory f 92.5 0.078 2.7E-06 54.1 4.1 21 437-464 189-209 (324)
102 2ygq_A WIF-1, WNT inhibitory f 92.3 0.17 5.8E-06 51.6 6.3 54 435-513 155-208 (324)
103 3gha_A Disulfide bond formatio 92.2 0.53 1.8E-05 44.2 9.2 95 287-393 84-180 (202)
104 1nzi_A Complement C1S componen 92.2 0.064 2.2E-06 48.4 2.6 48 459-520 107-158 (159)
105 2gy5_A Angiopoietin-1 receptor 91.7 0.13 4.3E-06 54.6 4.6 60 436-513 206-274 (423)
106 3bci_A Disulfide bond protein 90.6 1 3.6E-05 41.1 9.3 93 288-392 67-165 (186)
107 1ijq_A LDL receptor, low-densi 90.5 0.16 5.5E-06 50.9 3.9 41 419-469 266-315 (316)
108 4a0p_A LRP6, LRP-6, low-densit 90.4 0.14 4.7E-06 57.0 3.6 41 419-471 264-307 (628)
109 1nql_B Epidermal growth factor 89.6 0.14 4.9E-06 37.7 1.9 28 436-470 15-44 (53)
110 2wg3_C Hedgehog-interacting pr 89.3 0.099 3.4E-06 56.0 1.2 51 439-514 402-452 (463)
111 3sov_A LRP-6, low-density lipo 89.3 0.18 6E-06 51.0 3.0 43 419-471 266-310 (318)
112 3gyk_A 27KDA outer membrane pr 89.3 1.4 4.7E-05 39.6 8.8 79 304-393 83-161 (175)
113 3sov_A LRP-6, low-density lipo 89.1 0.16 5.4E-06 51.4 2.5 38 474-521 268-310 (318)
114 3vta_A Cucumisin; subtilisin-l 88.3 0.53 1.8E-05 52.2 6.2 62 94-174 280-341 (621)
115 3s94_A LRP-6, low-density lipo 87.5 0.25 8.6E-06 54.8 3.0 41 419-469 577-617 (619)
116 1k36_A Epiregulin; EGF-like fo 87.2 0.29 9.8E-06 34.9 2.1 33 474-514 4-40 (46)
117 3ca7_A Protein spitz; argos, E 86.0 0.29 9.9E-06 35.7 1.6 28 436-470 17-48 (52)
118 4a0p_A LRP6, LRP-6, low-densit 85.4 0.25 8.6E-06 54.9 1.6 41 474-524 266-310 (628)
119 3cfw_A L-selectin; EGF, cell a 84.9 0.41 1.4E-05 43.1 2.5 28 496-526 133-161 (164)
120 3s94_A LRP-6, low-density lipo 84.6 0.25 8.5E-06 54.8 1.0 39 472-520 577-618 (619)
121 1ijq_A LDL receptor, low-densi 84.2 0.42 1.4E-05 47.8 2.4 36 474-519 268-315 (316)
122 1b9w_A Protein (merozoite surf 83.8 1.5 5.2E-05 35.9 5.0 63 437-511 14-79 (95)
123 3k6s_B Integrin beta-2; cell r 82.4 1.5 5.1E-05 49.1 6.1 56 435-513 484-549 (687)
124 1nql_B Epidermal growth factor 81.9 0.43 1.5E-05 35.1 1.0 19 496-514 20-41 (53)
125 3cfw_A L-selectin; EGF, cell a 81.0 0.78 2.7E-05 41.2 2.7 33 436-477 128-160 (164)
126 3k6s_B Integrin beta-2; cell r 80.6 1.2 4.2E-05 49.8 4.6 54 438-514 532-589 (687)
127 3ltf_D Protein spitz; receptor 77.8 0.89 3E-05 34.0 1.6 29 436-471 17-49 (58)
128 1q4g_A Prostaglandin G/H synth 76.9 1.1 3.7E-05 49.0 2.7 31 433-470 8-40 (553)
129 2fd6_A Urokinase-type plasmino 73.4 3.3 0.00011 35.7 4.4 30 434-470 2-34 (122)
130 3ca7_A Protein spitz; argos, E 73.0 1.3 4.5E-05 32.1 1.5 14 500-513 31-44 (52)
131 2gy5_A Angiopoietin-1 receptor 73.0 2.2 7.7E-05 44.9 3.8 49 446-520 183-231 (423)
132 1n1i_A Merozoite surface prote 70.9 2.1 7.2E-05 35.9 2.4 38 482-527 17-57 (105)
133 3nt1_A Prostaglandin-endoperox 70.2 2.1 7.2E-05 47.0 2.9 31 433-470 7-39 (587)
134 3ltf_D Protein spitz; receptor 67.9 1.6 5.4E-05 32.6 0.9 15 500-514 31-45 (58)
135 3gmf_A Protein-disulfide isome 67.5 1.1 3.7E-05 42.3 -0.1 59 330-394 128-186 (205)
136 3zyj_B Netrin-G1; cell adhesio 66.9 2.2 7.4E-05 44.9 2.0 17 496-514 379-395 (426)
137 1g1t_A E-selectin; EGF, adhesi 66.2 3.1 0.0001 36.8 2.7 28 436-470 128-155 (157)
138 2p28_B Integrin beta-2; hybrid 66.1 2.6 9E-05 40.2 2.3 57 435-514 145-211 (217)
139 1ob1_C Major merozoite surface 64.8 2.5 8.6E-05 35.1 1.6 38 482-527 11-52 (99)
140 1q4g_A Prostaglandin G/H synth 63.3 2.9 0.0001 45.6 2.3 32 474-514 3-37 (553)
141 4dvc_A Thiol:disulfide interch 61.5 2.2 7.7E-05 38.2 0.8 51 328-385 109-159 (184)
142 3nt1_A Prostaglandin-endoperox 61.1 3.2 0.00011 45.5 2.2 32 474-514 2-36 (587)
143 3asi_A Neurexin-1-alpha; beta- 58.9 7.1 0.00024 40.4 4.3 33 432-470 190-222 (410)
144 3fby_A COMP, cartilage oligome 58.8 7.4 0.00025 42.0 4.3 38 474-519 19-59 (551)
145 3hd5_A Thiol:disulfide interch 52.8 5.7 0.0002 36.2 2.1 57 326-389 108-164 (195)
146 4aqs_A Laminin subunit beta-1; 50.5 6.1 0.00021 42.6 2.1 13 501-513 509-521 (525)
147 3hz8_A Thiol:disulfide interch 49.8 5.2 0.00018 36.8 1.3 59 326-391 110-169 (193)
148 1g1t_A E-selectin; EGF, adhesi 48.9 4.7 0.00016 35.5 0.7 19 496-514 133-152 (157)
149 2imf_A HCCA isomerase, 2-hydro 48.1 6.1 0.00021 36.5 1.5 57 329-392 127-183 (203)
150 3f4s_A Alpha-DSBA1, putative u 47.3 6.5 0.00022 37.4 1.5 58 328-392 129-190 (226)
151 2p28_B Integrin beta-2; hybrid 47.3 13 0.00045 35.2 3.7 66 437-526 100-182 (217)
152 3fz5_A Possible 2-hydroxychrom 46.2 7.3 0.00025 36.1 1.6 60 326-392 130-189 (202)
153 3l9s_A Thiol:disulfide interch 44.8 8.7 0.0003 35.4 1.9 52 328-386 110-161 (191)
154 2wg3_C Hedgehog-interacting pr 44.1 3.2 0.00011 44.2 -1.4 55 450-533 379-433 (463)
155 2rem_A Disulfide oxidoreductas 44.0 7.1 0.00024 35.3 1.2 53 328-387 114-166 (193)
156 3e50_C Protransforming growth 43.8 13 0.00044 26.8 2.3 19 500-521 28-46 (50)
157 2i9a_A Urokinase-type plasmino 42.9 28 0.00096 30.8 4.9 30 434-470 14-46 (145)
158 1xdt_R Hbegf, heparin-binding 40.2 14 0.00048 29.4 2.1 23 440-469 52-76 (79)
159 3h93_A Thiol:disulfide interch 40.1 8.9 0.0003 34.8 1.2 78 304-388 86-164 (192)
160 4aqs_A Laminin subunit beta-1; 38.2 10 0.00035 40.8 1.4 14 501-514 459-472 (525)
161 3ssb_I IMPI alpha, inducible m 37.0 12 0.00042 24.3 1.1 24 503-526 6-29 (32)
162 2znm_A Thiol:disulfide interch 36.9 13 0.00045 33.6 1.8 56 328-390 108-165 (195)
163 1iox_A Betacellulin; EGF-like 36.3 15 0.00051 26.4 1.6 26 439-471 19-46 (50)
164 3gl5_A Putative DSBA oxidoredu 35.7 13 0.00043 35.7 1.5 59 328-393 141-201 (239)
165 2rnl_A Amphiregulin; AR, color 35.5 27 0.00091 25.1 2.9 22 439-464 23-46 (50)
166 3l9v_A Putative thiol-disulfid 35.3 16 0.00053 33.4 2.0 54 326-386 101-155 (189)
167 3dem_A Complement factor MAsp- 34.4 25 0.00084 34.1 3.4 26 439-469 136-163 (278)
168 2fd6_A Urokinase-type plasmino 34.2 25 0.00087 30.0 3.1 27 496-525 9-41 (122)
169 3qcw_A Neurexin-1-alpha; synap 32.6 26 0.00087 41.9 3.8 33 428-464 1018-1051(1245)
170 4f87_A Plycb; lysin, bacteriop 32.6 20 0.00067 26.3 1.7 21 152-172 51-71 (72)
171 1nt0_A MAsp2, mannose-binding 31.6 28 0.00096 33.9 3.3 27 438-469 134-162 (286)
172 4b2v_A S64; toxin, ICK; NMR {S 30.6 21 0.00072 22.3 1.3 14 257-271 2-15 (32)
173 3dem_A Complement factor MAsp- 29.0 25 0.00084 34.1 2.4 23 496-519 138-163 (278)
174 3asi_A Neurexin-1-alpha; beta- 27.2 32 0.0011 35.4 3.0 31 474-513 186-218 (410)
175 3c7m_A Thiol:disulfide interch 24.5 14 0.00047 33.3 -0.4 48 332-386 125-172 (195)
176 3fby_A COMP, cartilage oligome 24.4 53 0.0018 35.4 4.0 28 437-469 31-59 (551)
177 2ygo_A WIF-1, WNT inhibitory f 22.6 49 0.0017 30.6 2.9 14 501-514 164-177 (188)
178 3qcw_A Neurexin-1-alpha; synap 21.8 41 0.0014 40.1 2.9 33 428-464 620-653 (1245)
179 1un2_A DSBA, thiol-disulfide i 21.5 35 0.0012 31.4 1.8 52 329-387 10-61 (197)
180 2in3_A Hypothetical protein; D 20.6 37 0.0013 31.1 1.7 55 329-390 136-195 (216)
181 1hx2_A BSTI; beta-sheet disulf 20.5 1.3E+02 0.0043 21.9 4.4 23 502-524 36-60 (60)
No 1
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=99.90 E-value=4.3e-23 Score=196.31 Aligned_cols=149 Identities=20% Similarity=0.246 Sum_probs=117.2
Q ss_pred ccceEEEEeceEEEEcc--Cc---ccceeeeeeccCCCCCCCCceeEEEEccC--CCcCCCCCCCCCCcccc-cCCCCCC
Q 008587 25 SVSRFVVEKNSLMVTSP--EK---IKGSHDSAIGNFGIPQYGGSMAGAVTYPK--ENRKGCREFGDFGISFK-AKPGALP 96 (560)
Q Consensus 25 ~~~~~~ve~~~l~V~~P--~~---l~~~~~~~~a~FG~~~~g~~~~G~lv~~~--~~~~gC~~~~~~~~~~~-~~~~~~~ 96 (560)
...+....++.+.|..- .. ....+....|+||.+.+.+.+.|.|+++. ++.+||++++++..... +.+..++
T Consensus 26 ~~~~~~~~~A~vn~sy~d~~~~~n~t~~~~~e~a~FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~g 105 (194)
T 3icu_A 26 MDGAEAVWTAYLNVSWRVPHTGVNRTVWELSEEGVYGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVS 105 (194)
T ss_dssp CCCSSCEEEEEEEEEEECCSSCTTCEEEEEEEEEEECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCC
T ss_pred cccceeEEEEEEEEEEECCCCCccceeeecccccccCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCC
Confidence 33445567777777664 32 22347789999999999999999999985 47899999876431111 1123468
Q ss_pred cEEEEecCC-CCHHHHHHHHHHcCCcEEEEEecCC--CceeecCCCccccccccccCccceeEEEEcHHHHHHHHHHHhC
Q 008587 97 NFVLVDRGD-CFFALKVWNAQKAGASAVLVADDIE--EALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSG 173 (560)
Q Consensus 97 ~IvLV~RG~-CsF~~Kv~nAq~aGA~avIV~n~~~--~~l~~m~~~~~~~~~~~~~~~i~IPsv~Is~~~G~~L~~~l~~ 173 (560)
+||||+||+ |+|.+|++|||++||+||||||+.. +.+.+|..+. ..+||++||++++|+.|+++|++
T Consensus 106 kIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~----------~~~IPsv~Is~~~G~~L~~~L~~ 175 (194)
T 3icu_A 106 WLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPG----------AVDIVAIMIGNLKGTKILQSIQR 175 (194)
T ss_dssp EEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTT----------CCSSEEEEECHHHHHHHHHHHHT
T ss_pred eEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCC----------CCceeEEEECHHHHHHHHHHHHC
Confidence 999999999 9999999999999999999999852 3456775321 35799999999999999999999
Q ss_pred CCeEEEEEEe
Q 008587 174 GEMVNVNLDW 183 (560)
Q Consensus 174 ~~~V~v~l~~ 183 (560)
|.+|+++|.+
T Consensus 176 G~~Vtvti~v 185 (194)
T 3icu_A 176 GIQVTMVIEV 185 (194)
T ss_dssp TCCEEEEEEE
T ss_pred CCeEEEEEEC
Confidence 9999999988
No 2
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=99.26 E-value=5.4e-11 Score=128.00 Aligned_cols=193 Identities=11% Similarity=0.060 Sum_probs=122.7
Q ss_pred eeeeeccCCCCCCCCceeEEEEccCCCcCCCCCCCCCCcccccCCCCCCcEEEEecCCCC---------HHHHH----HH
Q 008587 48 HDSAIGNFGIPQYGGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCF---------FALKV----WN 114 (560)
Q Consensus 48 ~~~~~a~FG~~~~g~~~~G~lv~~~~~~~gC~~~~~~~~~~~~~~~~~~~IvLV~RG~Cs---------F~~Kv----~n 114 (560)
+......++...+.+.++|.||+.. +...|.... + ..++||||||+||.|. |..|. .+
T Consensus 90 ~~~~~l~~s~~tp~~~vta~lV~v~-~~~~~~~~~-~-------~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~ 160 (444)
T 3iib_A 90 LVVTALGGSIATPAQGLSATIVRFD-TLQDLQNAE-A-------GSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVA 160 (444)
T ss_dssp ECEEECBTCCCCCTTCEEEEEEEES-SHHHHHTSC-T-------TTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCCCCCCCeEEEEEecC-CHHHHhhcc-c-------cccCccEEEEeCCCCCCcccccccchhhhhhhHHHH
Confidence 3444444554434567999999863 233333321 1 1344899999999995 77774 57
Q ss_pred HHHcCCcEEEEEecCCCce---e--ecCCCccccccccccCccceeEEEEcHHHHHHHHHHHhCCCeEEEEEEecccccC
Q 008587 115 AQKAGASAVLVADDIEEAL---I--TMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDWREAVPH 189 (560)
Q Consensus 115 Aq~aGA~avIV~n~~~~~l---~--~m~~~~~~~~~~~~~~~i~IPsv~Is~~~G~~L~~~l~~~~~V~v~l~~~~~~p~ 189 (560)
|+++||+||||+++..... . +|..+ .....||++.|+..+|+.|+++++.+.++.++|.......
T Consensus 161 A~~aGA~avIi~~~~~~~~~~~~tg~~~~~---------~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~~~~- 230 (444)
T 3iib_A 161 AAEKGAVGIIIRSIGTDHDRMAHTGMMRYE---------EGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGSERR- 230 (444)
T ss_dssp HHHTTCSEEEEECSCSCCSSCCCCCBCCCC---------TTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEEEEE-
T ss_pred HHHCCCeEEEEEccCCcccccccCCccccC---------CCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEeeeEc-
Confidence 9999999999999764321 1 12111 1246899999999999999999998877777777632211
Q ss_pred CCCceeEEEEeecCccccchhhhhHHHHHHhhhHHHHHhcCCceeEEeEEEEec-cCcccccccccccccccCCccCCCC
Q 008587 190 PDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWY-CPMTFTLSRQCKSQCINHGRYCAPD 268 (560)
Q Consensus 190 ~~~~v~~~~w~~s~~~~g~~c~~~~~f~~~f~~~~~~l~~~~~~~f~phy~~~~-c~~~~~~~~~~~~~Ci~~GrYC~~d 268 (560)
..+..+|++...... . .....+.+.-||.+|. .|+
T Consensus 231 -~~~~~~Nvi~~~~g~--------------------~-~~~~~i~~~aH~Ds~~~g~G---------------------- 266 (444)
T 3iib_A 231 -GETTSYNVIAEVKGS--------------------T-KADEIVLIGAHLDSWDEGTG---------------------- 266 (444)
T ss_dssp -EEEEEEEEEEEECCS--------------------T-EEEEEEEEEEECCCCSSSCC----------------------
T ss_pred -CCceeEEEEEEEeCC--------------------C-CCCCEEEEEeecccCCCCCC----------------------
Confidence 235678888776542 0 0012466666776552 111
Q ss_pred CCCCCCCCCCchhhHHHHHHHhhhhhhcccCCCCceeee
Q 008587 269 PEQDFSSGYEGKDVVLENLRQLCVFKVAKESKKPWVWWD 307 (560)
Q Consensus 269 pd~~~~~~~~G~dvv~E~lRqlCi~~~~~~~~~~~~ww~ 307 (560)
-.++.+|.-+++|.+|.|--........+.+.||+
T Consensus 267 ----a~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~ 301 (444)
T 3iib_A 267 ----AIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYA 301 (444)
T ss_dssp ----TTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEES
T ss_pred ----CccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEEC
Confidence 12356999999999999865432111125567776
No 3
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.21 E-value=1.7e-11 Score=100.79 Aligned_cols=80 Identities=25% Similarity=0.637 Sum_probs=65.1
Q ss_pred CCCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 416 GDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 416 ~c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
+|.|+|||.. ...|. ++.|+|+.++|.|.|++ ||.+++.. |+++ +||.. ..+|.+. .
T Consensus 1 sC~dideC~~-~~~C~------~g~C~n~~g~y~C~C~~----Gy~~~g~~-C~di--deC~~-~~~C~~~-~------- 57 (82)
T 1emn_A 1 SAVDMDECKE-PDVCK------HGQCINTDGSYRCECPF----GYILAGNE-CVDT--DECSV-GNPCGNG-T------- 57 (82)
T ss_dssp CCCCCCSSSS-TTSCS------SSEECCCSSCCCEECCT----TEEEETTE-EEEC--CGGGT-CCTTSSS-C-------
T ss_pred CCCccccCCC-CCCcC------CCEEEecCCCEEEECCC----CeECCCCc-cCCc--ccccC-CCCCCCC-E-------
Confidence 3679999986 56672 37899999999999999 99877766 9999 99985 4578643 2
Q ss_pred cccC-CCceeeCCCCcccCCCccc
Q 008587 496 CLDS-ENGKCQCPPGFKGDGVKSC 518 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~dg~~sC 518 (560)
|+|+ ++|.|.|++||++++.++|
T Consensus 58 C~n~~g~y~C~C~~G~~g~~~~~C 81 (82)
T 1emn_A 58 CKNVIGGFECTCEEGFEPGPMMTC 81 (82)
T ss_dssp EEECSSSEEECCSSSSCCCSSSCC
T ss_pred eECCCCCEEeECCCCeEeCCCCcc
Confidence 9999 9999999999998764434
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.20 E-value=3e-11 Score=108.83 Aligned_cols=99 Identities=22% Similarity=0.493 Sum_probs=78.3
Q ss_pred CCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCcccee-eeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 417 DVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 417 c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
+.|+|||..+...|. +++.|+++.++|.|.|++ ||.|+. |+ ++ ++|.. .+|...+.
T Consensus 2 c~dideC~~~~~~C~-----~~g~C~~~~g~~~C~C~~----Gy~G~~---C~~~~--~~C~~--~~C~~~~~------- 58 (135)
T 2vj3_A 2 AQDVDECSLGANPCE-----HAGKCINTLGSFECQCLQ----GYTGPR---CEIDV--NECVS--NPCQNDAT------- 58 (135)
T ss_dssp -CCCCTTTSSSCSSS-----TTCEEEECSSSEEEECCT----TEESTT---SCEEC--CTTTT--CCCCSSCE-------
T ss_pred CcccccccCCCCCCC-----CCCEeECCCCCEEEECCC----CCcCCc---ccccC--ccCCC--CCCCCCCE-------
Confidence 578999987777784 468999999999999999 998764 85 78 99974 46876544
Q ss_pred cccC-CCceeeCCCCcccCCCcccc-cCCCCCCCCCCC-CCCccCCCCCc
Q 008587 496 CLDS-ENGKCQCPPGFKGDGVKSCI-LMNAKRGKPVSA-LSVAAKTPGEA 542 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~dg~~sC~-didEC~~~~~C~-~~~~~~~~g~~ 542 (560)
|+++ ++|.|.|++||.|.. |+ ++|||... .|. .+.|.+++|++
T Consensus 59 C~~~~g~~~C~C~~G~~G~~---C~~~~~~C~~~-~C~~~g~C~~~~g~~ 104 (135)
T 2vj3_A 59 CLDQIGEFQCICMPGYEGVH---CEVNTDECASS-PCLHNGRCLDKINEF 104 (135)
T ss_dssp EEECSSCEEEECCTTEESSS---SCEECCTTTTC-CSTTTCEEEECSSCE
T ss_pred EeCCCCCceeeCCCCCcCCc---ceecCCcccCC-CcCCCCEeECCCCCe
Confidence 9999 999999999999763 85 89999865 464 46677777754
No 5
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=99.17 E-value=3.6e-10 Score=120.75 Aligned_cols=177 Identities=19% Similarity=0.218 Sum_probs=114.2
Q ss_pred CCceeEEEEccCCCcCCCCCCCCCCcccccCCCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCCCcee-ecCCC
Q 008587 61 GGSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALI-TMDTP 139 (560)
Q Consensus 61 g~~~~G~lv~~~~~~~gC~~~~~~~~~~~~~~~~~~~IvLV~RG~CsF~~Kv~nAq~aGA~avIV~n~~~~~l~-~m~~~ 139 (560)
.+.++|.|++.. .| .+.+ |++ -+.+++||||+||.|+|.+|+.+|+++||+|||||++.+..+. ++..
T Consensus 90 ~g~v~a~lv~~~---~G-~~~D-----~~~-~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~- 158 (421)
T 2ek8_A 90 NSDVTAELVYVG---LG-TTAD-----VAG-KDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGG- 158 (421)
T ss_dssp CEEEEEEEEECT---TC-CTTT-----TTT-SCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSS-
T ss_pred CCCcceEEEECC---CC-Chhh-----cCC-CCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCC-
Confidence 347899998742 23 2222 221 1345899999999999999999999999999999998754322 1110
Q ss_pred ccccccccccCccceeEEEEcHHHHHHHHHHH---hCCCeEEEEEEecccccCCCCceeEEEEeecCccccchhhhhHHH
Q 008587 140 EEDISSAKYIENITIPSALIDKSFGETLKKAL---SGGEMVNVNLDWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAF 216 (560)
Q Consensus 140 ~~~~~~~~~~~~i~IPsv~Is~~~G~~L~~~l---~~~~~V~v~l~~~~~~p~~~~~v~~~~w~~s~~~~g~~c~~~~~f 216 (560)
.....||++.|+.++++.|++.+ +.+ ++.+++.... . ..+..+|++......-.
T Consensus 159 ---------~~~~~IP~~~Is~~~a~~L~~~l~~~~~g-~~~v~l~~~~-~---~~~~~~Nvi~~~~g~~~--------- 215 (421)
T 2ek8_A 159 ---------SDASFVAAVGITKQEGDALAANLRAGEKI-TATVKVAGAE-V---KTLTSHNVIATKKPDAN--------- 215 (421)
T ss_dssp ---------CCTTCCEEEEECHHHHHHHHHHHHTTCCC-EEEEEEESCE-E---EEEEEEEEEEEECCCSS---------
T ss_pred ---------CCCCCccEEEeCHHHHHHHHHHhhhhccC-Cccccccccc-c---ccccccceEEEecCccc---------
Confidence 12468999999999999999999 444 5666666622 2 34557888876544200
Q ss_pred HHHhhhHHHHHhcCCceeEEeEEEEeccCcccccccccccccccCCccCCCCCCCCCCCCCCchhhHHHHHHHhhhhhhc
Q 008587 217 VKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCINHGRYCAPDPEQDFSSGYEGKDVVLENLRQLCVFKVA 296 (560)
Q Consensus 217 ~~~f~~~~~~l~~~~~~~f~phy~~~~c~~~~~~~~~~~~~Ci~~GrYC~~dpd~~~~~~~~G~dvv~E~lRqlCi~~~~ 296 (560)
.-+....+.+.=||.+|.- | | + -.++.+|.-+++|.+|.|--++..
T Consensus 216 ---------~~~~~~~v~~~aH~D~v~~-----------------g------~-G-a~D~~~G~a~~le~~~~l~~~~~~ 261 (421)
T 2ek8_A 216 ---------KKNTNDIIIIGSHHDSVEK-----------------A------P-G-ANDDASGVAVTLELARVMSKLKTD 261 (421)
T ss_dssp ---------TTCCCCEEEEEEECCCCTT-----------------C------C-C-TTTTHHHHHHHHHHHHHHTTSCCS
T ss_pred ---------CCCCCCEEEEecccccCCC-----------------C------C-C-CCCCcHhHHHHHHHHHHHhccCCC
Confidence 0001235677777765520 0 1 1 113569999999999998754332
Q ss_pred ccCCCCceeee
Q 008587 297 KESKKPWVWWD 307 (560)
Q Consensus 297 ~~~~~~~~ww~ 307 (560)
. ...+.||.
T Consensus 262 ~--~i~~~~~~ 270 (421)
T 2ek8_A 262 T--ELRFITFG 270 (421)
T ss_dssp S--EEEEEEES
T ss_pred c--eEEEEEEC
Confidence 1 13445553
No 6
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.15 E-value=4.9e-11 Score=109.00 Aligned_cols=97 Identities=28% Similarity=0.616 Sum_probs=72.7
Q ss_pred CCCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 416 GDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 416 ~c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
.|.|+|||.. ..| .+.+.|+++.++|.|.|++ ||.|.. |+++ ++|...+++|.+.
T Consensus 44 ~c~dideC~~--~pC-----~n~g~C~~~~~~y~C~C~~----G~~G~~---C~~~--deC~~~~~~C~~~--------- 98 (146)
T 1x7a_L 44 QYVDGDQCEP--NPC-----LNGGLCKDDINSYECWCQV----GFEGKN---CELD--ATCNIKNGRCKQF--------- 98 (146)
T ss_dssp ------CCSS--CSS-----CTTCEEEECSSCEEEECCS----SEESTT---TCEE--CCTTSGGGSCSSB---------
T ss_pred cCCCcCcCCC--CCC-----CCCCEeECCCCCEEEecCC----CCcCCc---CCCC--ccccCCCCCCcCC---------
Confidence 4679999964 346 4568999999999999999 998653 9999 9999877788763
Q ss_pred c-ccC-CCceeeCCCCcc--cCCCcccccCCCCCCCCCCCCCCccCCCCCc
Q 008587 496 C-LDS-ENGKCQCPPGFK--GDGVKSCILMNAKRGKPVSALSVAAKTPGEA 542 (560)
Q Consensus 496 C-~n~-gs~~C~C~~Gf~--~dg~~sC~didEC~~~~~C~~~~~~~~~g~~ 542 (560)
| +++ ++|.|.|++||+ ++| +.|++++++ +|......++|.+.
T Consensus 99 C~~n~~g~y~C~C~~Gy~l~~dG-~~C~~~~~~----pCg~~~~~~~~~~l 144 (146)
T 1x7a_L 99 CKTGADSKVLCSCTTGYRLAPDQ-KSCKPAVPF----PCGRVSVSHSPTTL 144 (146)
T ss_dssp CCCCSSSCCCCBCCTTEEECTTS-SSEEECSSS----CTTCCCTTTTTTCC
T ss_pred CCCCCCCCEEeEcCCCcEeCCCC-CcCCCCCCC----CCCCcccCcCCccc
Confidence 9 999 999999999998 566 569999876 35555555666654
No 7
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.14 E-value=3.1e-11 Score=100.15 Aligned_cols=74 Identities=22% Similarity=0.501 Sum_probs=62.3
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec---CCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG---DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g---dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
|+|||..+++.|. ++.|+|+.++|.|.|++ ||.+ ++.. |+++ +||...+..|.. + .
T Consensus 2 dideC~~~~~~C~------~g~C~n~~g~y~C~C~~----Gy~~~~~~g~~-C~di--deC~~~~~~C~~-~-------~ 60 (86)
T 1lmj_A 2 DIDECRISPDLCG------RGQCVNTPGDFECKCDE----GYESGFMMMKN-CMDI--DECQRDPLLCRG-G-------V 60 (86)
T ss_dssp CCCTTTTCSSTTT------TSCEEEETTEEEECCCS----SEEECTTTSSS-EEEC--CHHHHCSSTTTT-S-------E
T ss_pred ccccccCCCCCCC------CCEEECCCCCEEeeCCC----CcCccCCCCCc-cCCc--ccccCCCCcCCC-C-------E
Confidence 7899998888883 35899999999999999 8884 3555 9999 999987777863 2 3
Q ss_pred cccC-CCceeeCCCCcccC
Q 008587 496 CLDS-ENGKCQCPPGFKGD 513 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~d 513 (560)
|+|+ ++|.|.|++||+++
T Consensus 61 C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 61 CHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp EEEETTEEEEESCTTSCCC
T ss_pred eEcCCCCEEEECcCCcccC
Confidence 9999 99999999999864
No 8
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.10 E-value=2.2e-10 Score=127.08 Aligned_cols=110 Identities=26% Similarity=0.592 Sum_probs=85.9
Q ss_pred eee-ccc-CcccCCCCccccCCCCCCcccCCCCCCcCCCCCCCcc---cceecCCceEEE-ccCCCCceeecCCcc----
Q 008587 397 LKA-ICS-GFEETTEPAVCLSGDVETNECLDNNGGCWQDKTANVT---ACKDTFRGRVCE-CPLVDGVQFKGDGYS---- 466 (560)
Q Consensus 397 ~~~-iC~-g~~~~~~p~~C~~~c~didEC~~~~~~C~~~~~~~~~---~C~nt~gsy~C~-C~~~~g~g~~gdg~~---- 466 (560)
|+| .|. ||.. ... .|.+++||..+++.|. +.+ .|+|+.++|.|. |++ ||.+.+..
T Consensus 25 y~C~~C~~GytG--dg~----~CeDiDEC~~~p~~C~-----~gg~~~~CvNt~gsY~C~~C~~----Gy~G~~c~g~g~ 89 (634)
T 1yo8_A 25 WSCGFCPVGFLG--NGT----HCEDLDECALVPDICF-----STSKVPRCVNTQPGFHCLPCPP----RYRGNQPVGVGL 89 (634)
T ss_dssp EEECCCCTTBCS--CSS----SCCBCCTTTTSCCCSC-----CCSSSCCEEECSSSEEECCCCT----TEEECCCEESSS
T ss_pred eECCcCCCccCC--CCC----CccccccccCCCCccc-----CCccccceeeccCceecccCCC----CcccCccccccc
Confidence 678 896 6652 122 3569999998888895 335 899999999998 999 88876522
Q ss_pred --------ceeeeCCCCccCCCCCCCCCCcCCCcccccccC-----CCceeeCCCCcccCCCcccc---cCCCCCC-CCC
Q 008587 467 --------HCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-----ENGKCQCPPGFKGDGVKSCI---LMNAKRG-KPV 529 (560)
Q Consensus 467 --------~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-----gs~~C~C~~Gf~~dg~~sC~---didEC~~-~~~ 529 (560)
.|+++ +||...+++|...+. |+++ ++|.|.|++||.|+|. .|+ |||||.. ...
T Consensus 90 ~~~~~dg~~C~di--deC~~~~~pC~~~~~-------Cvnt~~~~~GsY~C~C~~Gy~GdG~-~Ce~d~DiDeC~~~~~~ 159 (634)
T 1yo8_A 90 EAAKTEKQVCEPE--NPCKDKTHNCHKHAE-------CIYLGHFSDPMYKCECQTGYAGDGL-ICGEDSDLDGWPNLNLV 159 (634)
T ss_dssp HHHHSCCCCEEEC--CTTTTTCCCCCTTEE-------EEECCTTCSSSEEEEECTTEEESSS-SEEECTTSSSSCSSCCT
T ss_pred cccccCCCccccc--ccccCCCcccccCcc-------ccccccccccceeeeccCCccccCc-ccccccCcccccCCCCc
Confidence 39999 999987789987654 9886 5899999999999984 596 9999974 344
Q ss_pred CC
Q 008587 530 SA 531 (560)
Q Consensus 530 C~ 531 (560)
|.
T Consensus 160 C~ 161 (634)
T 1yo8_A 160 CA 161 (634)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 9
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.09 E-value=8.4e-11 Score=106.76 Aligned_cols=110 Identities=19% Similarity=0.421 Sum_probs=79.7
Q ss_pred eeeccc-CcccCCCC-ccccCCCCCCcccCCCCC-CcCCCCCCCcccceecCCceEEEccCCCCceeecC----------
Q 008587 397 LKAICS-GFEETTEP-AVCLSGDVETNECLDNNG-GCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGD---------- 463 (560)
Q Consensus 397 ~~~iC~-g~~~~~~p-~~C~~~c~didEC~~~~~-~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gd---------- 463 (560)
+.+.|. ||...... ..=...|.|+|||..... .|. +++.|+|+.++|.|.|++ ||.+.
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~-----~~~~C~n~~g~y~C~C~~----Gy~g~~~~~~~~~~~ 89 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCG-----KFSDCWNTEGSYDCVCSP----GYEPVSGAKTFKNES 89 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCC-----TTEEEEECSSCEEEEECT----TEEETTCCSCBSSGG
T ss_pred CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCC-----CCCEEEcCCCCeEeECCC----CcccCcCccccccCC
Confidence 567885 66532100 000124568999987543 573 468999999999999999 89876
Q ss_pred CccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCC-CcccccCCCCC
Q 008587 464 GYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDG-VKSCILMNAKR 525 (560)
Q Consensus 464 g~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg-~~sC~didEC~ 525 (560)
+.. |+++ +||....+.|...+. |+|+ ++|.|.|++||+++. .+.|.++++|.
T Consensus 90 ~~~-C~di--deC~~~~~~C~~~~~-------C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C~ 143 (143)
T 2bou_A 90 ENT-CQDV--DECSSGQHQCDSSTV-------CFNTVGSYSCRCRPGWKPRHGIPNNQKDTVCE 143 (143)
T ss_dssp GCC-EEEC--CHHHHTCCCCCTTSE-------EEECSSCEEEECCSSSCBCTTCCSSBTTCCBC
T ss_pred CCC-cCCc--cCccCcCCCCCCCCE-------EECCCCCEEeeCCCCcccCCCCccCccCCccC
Confidence 334 9999 999976778987654 9999 999999999999643 25688888874
No 10
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.07 E-value=8.8e-11 Score=130.24 Aligned_cols=104 Identities=25% Similarity=0.573 Sum_probs=80.4
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCc-eEE-EccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRG-RVC-ECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gs-y~C-~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
+|++||.. ..| .+.+.|+++.++ |.| .|++ ||.+++.+ |+++ +||...++.|.+.+. ...
T Consensus 1 ~DIDeC~~--nPC-----~~gg~C~n~~~Gsy~C~~C~~----GytGdg~~-CeDi--DEC~~~p~~C~~gg~----~~~ 62 (634)
T 1yo8_A 1 ADPDGCLS--NPC-----FPGAQCSSFPDGSWSCGFCPV----GFLGNGTH-CEDL--DECALVPDICFSTSK----VPR 62 (634)
T ss_dssp ---CGGGG--CCS-----CTTCCEEECTTSCEEECCCCT----TBCSCSSS-CCBC--CTTTTSCCCSCCCSS----SCC
T ss_pred CcccccCC--CCC-----CCCCEEecCCCCCeECCcCCC----ccCCCCCC-cccc--ccccCCCCcccCCcc----ccc
Confidence 37889953 346 456899999864 999 9999 99998877 9999 999988788988640 002
Q ss_pred cccC-CCceee-CCCCcccCCC------------cccccCCCCCCC-CCCC-CCCccCCC
Q 008587 496 CLDS-ENGKCQ-CPPGFKGDGV------------KSCILMNAKRGK-PVSA-LSVAAKTP 539 (560)
Q Consensus 496 C~n~-gs~~C~-C~~Gf~~dg~------------~sC~didEC~~~-~~C~-~~~~~~~~ 539 (560)
|+++ ++|.|. |++||+|.+. +.|++|+||... ..|. .+.|.|++
T Consensus 63 CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~ 122 (634)
T 1yo8_A 63 CVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLG 122 (634)
T ss_dssp EEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECC
T ss_pred eeeccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccc
Confidence 9999 999998 9999997652 359999999864 5685 45677887
No 11
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.02 E-value=2.8e-11 Score=106.59 Aligned_cols=95 Identities=21% Similarity=0.492 Sum_probs=71.3
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceec-CCceEEEccCCCCceeecCCccceeeeCCCCccC--CCCCCCCCCcCCCccc
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDT-FRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKI--NNGGCWHESKDGHTYS 494 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt-~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~--~~~~C~~~~~~~~~~~ 494 (560)
.|+|||. ++.|. +.|+|+ .++|.|.|++ ||.++. + ++ ++|.. .+++|..
T Consensus 2 ~dideC~--~~pC~-------~~C~~~~~g~y~C~C~~----Gy~g~~---~-~~--~~C~~~C~~~~C~~--------- 53 (118)
T 1dx5_I 2 EPVDPCF--RANCE-------YQCQPLDQTSYLCVCAE----GFAPIP---H-EP--HRCQMFCNQTACPA--------- 53 (118)
T ss_dssp CCCCGGG--GCCCS-------SEEEECSSSCEEEECCT----TEEEET---T-EE--EEEEECCCSSEEEC---------
T ss_pred CccccCC--CCCCC-------CCCCCCCCCCEEeECCC----CccccC---C-CC--CccccccCCCCCCC---------
Confidence 3789995 45672 489999 9999999999 898764 1 22 34432 1344542
Q ss_pred ccccCCCceeeCCCCcccC-CCcccccCCCCCCCCCCCCCCccCCCCCc
Q 008587 495 ACLDSENGKCQCPPGFKGD-GVKSCILMNAKRGKPVSALSVAAKTPGEA 542 (560)
Q Consensus 495 ~C~n~gs~~C~C~~Gf~~d-g~~sC~didEC~~~~~C~~~~~~~~~g~~ 542 (560)
.|.+.++|.|.|++||+++ | +.|+|||||.....| .+.|.|++|++
T Consensus 54 ~C~~~~~y~C~C~~Gy~~~~g-~~C~dideC~~~~~C-~~~C~n~~g~y 100 (118)
T 1dx5_I 54 DCDPNTQASCECPEGYILDDG-FICTDIDECENGGFC-SGVCHNLPGTF 100 (118)
T ss_dssp EECTTSTTCEECCTTEEEETT-TEEEECCHHHHCSSC-SSEEEECSSSE
T ss_pred cccCCCCeEeECCCCccCCCC-CccccccccCCCCCC-cCeEEeCCCCE
Confidence 2877788999999999965 5 569999999874568 77889999986
No 12
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.99 E-value=1.6e-10 Score=96.01 Aligned_cols=80 Identities=30% Similarity=0.646 Sum_probs=62.5
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec--CCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG--DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g--dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
.|+|||..+++.| +.+.|+|+.++|.|.|++ ||.+ ++.. |+++ +||.. ++|.+ .
T Consensus 1 ~dideC~~~~~~C------~~~~C~n~~g~y~C~C~~----G~~~~~~g~~-C~di--deC~~--~~C~~---------~ 56 (87)
T 1z6c_A 1 KDVDECSLKPSIC------GTAVCKNIPGDFECECPE----GYRYNLKSKS-CEDI--DECSE--NMCAQ---------L 56 (87)
T ss_dssp CCSCSSSSSSSSB------TTSSCCCBTTBCCCSSST----TCEEETTTTE-EECC--CHHHH--SCCSS---------E
T ss_pred CccccccCCCCCC------CCCEeECCCCCEEEECCC----CceECCCCCc-CCCc--CeeCC--CCCCC---------E
Confidence 3789998877778 258899999999999999 7764 3556 9999 99974 57873 2
Q ss_pred cccC-CCceeeCC--CCcc--cCCCcccccCC
Q 008587 496 CLDS-ENGKCQCP--PGFK--GDGVKSCILMN 522 (560)
Q Consensus 496 C~n~-gs~~C~C~--~Gf~--~dg~~sC~did 522 (560)
|+|+ ++|.|.|+ +||+ .++ +.|.||+
T Consensus 57 C~n~~g~y~C~C~g~~G~~~~~~~-~~C~di~ 87 (87)
T 1z6c_A 57 CVNYPGGYTCYCDGKKGFKLAQDQ-KSCEVVS 87 (87)
T ss_dssp ECCCSSSCCEECCSSSCCBCCTTS-SSCBCCC
T ss_pred EEccCCCEEEECCCCcCCcccCCC-CcceECc
Confidence 9999 99999995 6776 233 4577764
No 13
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.99 E-value=1.2e-10 Score=105.70 Aligned_cols=92 Identities=18% Similarity=0.409 Sum_probs=70.9
Q ss_pred CCCCcccceecCCceEEEccCCCCceeecC-------CccceeeeCCCCccCCC-CCCCCCCcCCCcccccccC-CCcee
Q 008587 434 KTANVTACKDTFRGRVCECPLVDGVQFKGD-------GYSHCEVSGPGKCKINN-GGCWHESKDGHTYSACLDS-ENGKC 504 (560)
Q Consensus 434 ~~~~~~~C~nt~gsy~C~C~~~~g~g~~gd-------g~~~C~di~~~eC~~~~-~~C~~~~~~~~~~~~C~n~-gs~~C 504 (560)
++.+++.|+++ |.|.|++ ||.+. +.. |+++ ++|.... ..|...+. |+++ ++|.|
T Consensus 8 ~C~~~~~C~~~---~~C~C~~----G~~g~~~~~~~~~~~-C~di--deC~~~~~~~C~~~~~-------C~n~~g~y~C 70 (143)
T 2bou_A 8 WCPQDSSCVNA---TACRCNP----GFSSFSEIITTPMET-CDDI--NECATLSKVSCGKFSD-------CWNTEGSYDC 70 (143)
T ss_dssp TCCTTEEESSS---SCEEECT----TEECSSSSBCSTTCC-CEEC--CGGGC----CCCTTEE-------EEECSSCEEE
T ss_pred cCCCCCEEcCC---CEEeCCC----CCcCccccccCCCCc-CCcc--ccccCCCCCCCCCCCE-------EEcCCCCeEe
Confidence 45667888875 8999999 89874 345 9999 9999754 37976544 9999 99999
Q ss_pred eCCCCcccCC---------CcccccCCCCCC-CCCCCC-CCccCCCCCc
Q 008587 505 QCPPGFKGDG---------VKSCILMNAKRG-KPVSAL-SVAAKTPGEA 542 (560)
Q Consensus 505 ~C~~Gf~~dg---------~~sC~didEC~~-~~~C~~-~~~~~~~g~~ 542 (560)
.|++||+++. .+.|+|||||.. ...|.. +.|.|++|++
T Consensus 71 ~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y 119 (143)
T 2bou_A 71 VCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSY 119 (143)
T ss_dssp EECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCE
T ss_pred ECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCE
Confidence 9999999762 136999999985 356754 6788999975
No 14
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.97 E-value=1.1e-10 Score=110.64 Aligned_cols=118 Identities=19% Similarity=0.419 Sum_probs=89.4
Q ss_pred ceeeeccc-CcccCCCCccccCCCCCCcccCCC--CCCcCCCCCCCcccceecC-----CceEEEccCCCCceeecCCcc
Q 008587 395 AVLKAICS-GFEETTEPAVCLSGDVETNECLDN--NGGCWQDKTANVTACKDTF-----RGRVCECPLVDGVQFKGDGYS 466 (560)
Q Consensus 395 ~v~~~iC~-g~~~~~~p~~C~~~c~didEC~~~--~~~C~~~~~~~~~~C~nt~-----gsy~C~C~~~~g~g~~gdg~~ 466 (560)
..|++.|. ||... ... .|.++|||... ...| .+.+.|+++. ++|.|.|++ ||.+++..
T Consensus 23 g~~~C~C~~G~~g~-~~~----~C~~id~C~~~~~~~~C-----~~~~~C~~~~~~~~~g~y~C~C~~----G~~g~~~~ 88 (186)
T 1z1y_A 23 NHFXCMCNEGLVHL-SEN----TCEEXNECXXETLGXAC-----GEFGQCIENPDPAQVNMYXCGCIE----GYTLXEDT 88 (186)
T ss_dssp SCEEEEECTTEEEE-ETT----EEEECCCCSGGGTTSEE-----ETTEEEEECSSTTSSCSEEEEECT----TEEEETTE
T ss_pred CCeEeECCCCCccC-CCC----ccCCCCcccCCCCCCCC-----CCCCEeecCCCCcCCCCEECCCCC----CCccCCCC
Confidence 45788996 66532 112 35588999865 4567 3568999999 899999999 99988765
Q ss_pred ceeeeCCCCccCCCCCCCCCCcCCCcccccc----cC-CCceeeCCCCccc---CCCcccccC--CCCCCCCCC--CCCC
Q 008587 467 HCEVSGPGKCKINNGGCWHESKDGHTYSACL----DS-ENGKCQCPPGFKG---DGVKSCILM--NAKRGKPVS--ALSV 534 (560)
Q Consensus 467 ~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~----n~-gs~~C~C~~Gf~~---dg~~sC~di--dEC~~~~~C--~~~~ 534 (560)
|+ + ++|... +|...+. |+ ++ ++|.|.|++||+| ++ +.|+++ |||.. .| ..+.
T Consensus 89 -C~-~--d~C~~~--~C~~~g~-------C~~~~~~~~g~~~C~C~~Gy~g~~~~~-~~C~~~~~~~C~~--~C~~~~~~ 152 (186)
T 1z1y_A 89 -CV-L--DVCQYX--NCGESGE-------CIVEYLSEIQSAGCSCAIGXVPNPEDE-XXCTXTGETACQL--XCNTDNEV 152 (186)
T ss_dssp -EE-E--GGGTTC--CCCTTEE-------EEEEEETTEEEEEEEECTEEEEETTTT-TEEEEEECCCCCC--CCCTTTEE
T ss_pred -CC-C--CcCcCC--CCCCCCE-------EeeCCcCCCCCceEECCCCCcccCCCC-CcceEcCCCcccc--cccccCcc
Confidence 87 7 999853 5876543 88 88 8999999999998 66 469976 89984 57 4567
Q ss_pred ccCCCCCc
Q 008587 535 AAKTPGEA 542 (560)
Q Consensus 535 ~~~~~g~~ 542 (560)
|.|++|++
T Consensus 153 C~n~~g~y 160 (186)
T 1z1y_A 153 CXNVEGVY 160 (186)
T ss_dssp EEEETTEE
T ss_pred eecCCCCe
Confidence 77888864
No 15
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.97 E-value=1.2e-10 Score=100.72 Aligned_cols=71 Identities=42% Similarity=0.813 Sum_probs=34.7
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec-CCccceeeeCCCCccCCCCCCCCCCcCCCcccccc
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG-DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACL 497 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g-dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~ 497 (560)
|+|||..++++| .+.|+|+.++|.|.|++ ||.+ ++.. |+++ +||.. .++|... |+
T Consensus 28 d~neC~~~~~~C-------~~~C~n~~g~y~C~C~~----Gy~g~~g~~-C~di--deC~~-~~~C~~~---------C~ 83 (107)
T 2w2n_E 28 GTNECLDNNGGC-------SYVCNDLKIGYECLCPD----GFQLVAQRR-CEDI--DECQD-PDTCSQL---------CV 83 (107)
T ss_dssp SCCGGGTGGGGC-------SSEEECCSBSCEEECCT----TCEEETTTE-EEC---------------------------
T ss_pred cCccCcCCCCCC-------CCEeEeCCCCeEEECCC----CccccCCCc-cccc--cccCC-CCCcCCe---------ee
Confidence 889999888899 37899999999999999 8887 4455 9999 99974 4678632 99
Q ss_pred cC-CCceeeCCCCcccC
Q 008587 498 DS-ENGKCQCPPGFKGD 513 (560)
Q Consensus 498 n~-gs~~C~C~~Gf~~d 513 (560)
|+ ++|.|.|++||.++
T Consensus 84 n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 84 NLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp -----------------
T ss_pred cCCCCEEEECCCCceEC
Confidence 99 99999999999865
No 16
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.96 E-value=1.4e-09 Score=122.48 Aligned_cols=106 Identities=22% Similarity=0.243 Sum_probs=68.9
Q ss_pred CCceeEEEEccCCCcCCCCCCCCCCccccc--CCCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCCC-------
Q 008587 61 GGSMAGAVTYPKENRKGCREFGDFGISFKA--KPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEE------- 131 (560)
Q Consensus 61 g~~~~G~lv~~~~~~~gC~~~~~~~~~~~~--~~~~~~~IvLV~RG~CsF~~Kv~nAq~aGA~avIV~n~~~~------- 131 (560)
.+.++|.|||. ..|+. .+.. .+.. .-+..|+||||+||.|+|.+|+++|+++||+|||||++..+
T Consensus 124 ~G~v~g~lV~v---~~G~~-~Df~--~L~~~~~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~ 197 (707)
T 3fed_A 124 QGMPEGDLVYV---NYART-EDFF--KLEREMGINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQ 197 (707)
T ss_dssp CBCCEECEEEC---TTCCH-HHHH--HHHHTSCCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCC
T ss_pred CCceEEEEEEe---cCCch-hhHH--HHHhccCCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccc
Confidence 45789999985 25652 1110 0110 12456899999999999999999999999999999986310
Q ss_pred ----------------ceeecCCCcccccccccc--------------CccceeEEEEcHHHHHHHHHHHhC
Q 008587 132 ----------------ALITMDTPEEDISSAKYI--------------ENITIPSALIDKSFGETLKKALSG 173 (560)
Q Consensus 132 ----------------~l~~m~~~~~~~~~~~~~--------------~~i~IPsv~Is~~~G~~L~~~l~~ 173 (560)
.+..+..+++ +...|+. .-..||++-|++.+|+.|++.|..
T Consensus 198 ~yP~~~~~p~~~vqrGsv~~~~~~GD-p~TPG~ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 198 PYPKGWNLPGTAAQRGNVLNLNGAGD-PLTPGYPAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp BTTTSSBCCTTCCCCCCCCCCTTCCS-TTCTTSCCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cCCCCccCCCccccccceecccCCCC-CCCCCCcccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 0000000110 0000110 135899999999999999998863
No 17
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.94 E-value=5e-10 Score=97.86 Aligned_cols=89 Identities=28% Similarity=0.603 Sum_probs=64.7
Q ss_pred CCCCcccCCCC--CCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceeeeC-CCCccCCCCCCCCCCcCCCcc
Q 008587 417 DVETNECLDNN--GGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSG-PGKCKINNGGCWHESKDGHTY 493 (560)
Q Consensus 417 c~didEC~~~~--~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~-~~eC~~~~~~C~~~~~~~~~~ 493 (560)
++|+|||..+. +.|. ..+.+++.|+++.++|.|.|++ ||.|+. |+++. .++|...+++|.+.
T Consensus 3 ~~d~d~C~~~p~~~~C~-~~C~~~g~C~~~~~~y~C~C~~----G~~G~~---C~~~~~~~~C~~~~~~C~~~------- 67 (114)
T 1aut_L 3 HVDGDQCLVLPLEHPCA-SLCCGHGTCIDGIGSFSCDCRS----GWEGRF---CQREVSFLNCSLDNGGCTHY------- 67 (114)
T ss_dssp -----CCCCCSSCCSSS-STTTTSEEECCCSSCCCEEECT----TEESTT---SCEECCSSSSSSGGGGCSSE-------
T ss_pred ceecccccCCCcccccc-ccCCCcCCCCCCCCCcEeeCCC----CCcCCC---cCcCCcCCcCcCCCCCCCCE-------
Confidence 56889998766 2342 1245678999999999999999 998875 88751 14688777778763
Q ss_pred cccccC-CCceeeCCCCccc--CCCcccccCCC
Q 008587 494 SACLDS-ENGKCQCPPGFKG--DGVKSCILMNA 523 (560)
Q Consensus 494 ~~C~n~-gs~~C~C~~Gf~~--dg~~sC~didE 523 (560)
|+|+ ++|.|.|++||++ ++ ++|.++++
T Consensus 68 --C~n~~g~y~C~C~~G~~~~~~g-~~C~~~~~ 97 (114)
T 1aut_L 68 --CLEEVGWRRCSCAPGYKLGDDL-LQCHPAVK 97 (114)
T ss_dssp --EEECSSSEEEECCTTEEECTTS-SCEEECSS
T ss_pred --eECCCCCEEeECCCCeeECCCC-CccCcCcc
Confidence 9999 9999999999984 45 56988765
No 18
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.89 E-value=1.5e-10 Score=107.47 Aligned_cols=105 Identities=21% Similarity=0.409 Sum_probs=69.7
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec--CCccceeeeCCCC--ccCCCCCCCC--CCcCCC
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG--DGYSHCEVSGPGK--CKINNGGCWH--ESKDGH 491 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g--dg~~~C~di~~~e--C~~~~~~C~~--~~~~~~ 491 (560)
.|+|||.. ...|. ++.|+|+.++|.|.|++ ||.+ ++.+ |+++ ++ |......|.. ..
T Consensus 1 ~dideC~~-~~~C~------~~~C~n~~gsy~C~C~~----Gy~~~~~g~~-C~d~--~~~~C~~~~~~c~~~~~~---- 62 (162)
T 1uzk_A 1 TDVNECLD-PTTCI------SGNCVNTPGSYICDCPP----DFELNPTRVG-CVDT--RSGNCYLDIRPRGDNGDT---- 62 (162)
T ss_dssp CCCCGGGS-TTSSB------TSEEEEETTEEEEECCT----TCEECTTSSB-EECC--CCEEEEEEC-------------
T ss_pred CccccCCC-CCCCC------CCEeECCCCCEEEeCCC----CCeECCCCCc-ccCC--CCCcccCCCcccCCCCCC----
Confidence 37899974 34672 47999999999999999 7874 4666 9998 76 8754433421 11
Q ss_pred cccccccC-C----Cce-------------------------eeCCC--CcccCCC-cccccCCCCCCC-CCCCCCCccC
Q 008587 492 TYSACLDS-E----NGK-------------------------CQCPP--GFKGDGV-KSCILMNAKRGK-PVSALSVAAK 537 (560)
Q Consensus 492 ~~~~C~n~-g----s~~-------------------------C~C~~--Gf~~dg~-~sC~didEC~~~-~~C~~~~~~~ 537 (560)
.|+++ + +|. |.|++ ||+++.. +.|+|||||... ..|.++.|.|
T Consensus 63 ---~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n 139 (162)
T 1uzk_A 63 ---ACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCIN 139 (162)
T ss_dssp ----CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEE
T ss_pred ---cccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEc
Confidence 25554 3 344 44544 5554421 458999999864 4687778999
Q ss_pred CCCCcc
Q 008587 538 TPGEAM 543 (560)
Q Consensus 538 ~~g~~~ 543 (560)
++|++.
T Consensus 140 ~~gsy~ 145 (162)
T 1uzk_A 140 TFGSFQ 145 (162)
T ss_dssp CSSCEE
T ss_pred CCCCEE
Confidence 999863
No 19
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.86 E-value=5.4e-09 Score=116.73 Aligned_cols=171 Identities=19% Similarity=0.227 Sum_probs=104.1
Q ss_pred CceeEEEEccCCCcCCCCCCCCCCcccccCCCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCCCc-ee------
Q 008587 62 GSMAGAVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEA-LI------ 134 (560)
Q Consensus 62 ~~~~G~lv~~~~~~~gC~~~~~~~~~~~~~~~~~~~IvLV~RG~CsF~~Kv~nAq~aGA~avIV~n~~~~~-l~------ 134 (560)
+.++|.|||.. .|+.. +... ++ -+..|+||||+||.|+|..|+++|+++||+|||||++..+. ..
T Consensus 106 g~v~g~lV~vg---~G~~~-D~~~--l~--vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~ 177 (640)
T 3kas_A 106 ATVTGKLVHAN---FGTKK-DFED--LY--TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSF 177 (640)
T ss_dssp EEEEECEEECT---TCCHH-HHHT--CS--SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCC
T ss_pred CceEEEEEEec---CCChh-hHHH--hh--cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEecccccccccccccc
Confidence 46889999852 45431 1111 11 13458999999999999999999999999999999976421 00
Q ss_pred ----ecCCCccccccccc-------------cCccceeEEEEcHHHHHHHHHHHhC----------------CCeEEEEE
Q 008587 135 ----TMDTPEEDISSAKY-------------IENITIPSALIDKSFGETLKKALSG----------------GEMVNVNL 181 (560)
Q Consensus 135 ----~m~~~~~~~~~~~~-------------~~~i~IPsv~Is~~~G~~L~~~l~~----------------~~~V~v~l 181 (560)
.++ +. ++...++ .....||++.|+..+|+.|++.+.. +..+.++|
T Consensus 178 ~G~~~~~-~G-dp~tpg~ps~~~~~~~~~~~~~~p~IP~~~Is~~~a~~Ll~~l~g~~~~~~~~~~~~~~~~g~~~~v~l 255 (640)
T 3kas_A 178 FGHAHLG-TG-DPYTPGFPSFNHTQFPPSRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKL 255 (640)
T ss_dssp CEECCSS-SS-CSCCCSSCC---CCCCCCSSCCCCSSCEEECCHHHHHHHHTTEEEECCGGGCCCTTCEEEECTTEEEEE
T ss_pred ccccccC-CC-CCCCCCcccccccccccccccCCCCCCEEecCHHHHHHHHHHccCCchhhhhcccCcccccCCCceEEE
Confidence 000 00 0000000 1124799999999999999988753 22345555
Q ss_pred EecccccCCCCceeEEEEeecCccccchhhhhHHHHHHhhhHHHHHhcCCceeEEeEEEEeccCcccccccccccccccC
Q 008587 182 DWREAVPHPDDRVEYELWTNSNDECGVKCDMLMAFVKEFRGPAQILEKGGYTQFTPHYITWYCPMTFTLSRQCKSQCINH 261 (560)
Q Consensus 182 ~~~~~~p~~~~~v~~~~w~~s~~~~g~~c~~~~~f~~~f~~~~~~l~~~~~~~f~phy~~~~c~~~~~~~~~~~~~Ci~~ 261 (560)
.+.... ..+..+|++......- +...++.+.=||..| .|+
T Consensus 256 ~v~~~~---~~~~~~NVi~~i~G~~---------------------~~~~~vvvgaH~Ds~-~~G--------------- 295 (640)
T 3kas_A 256 TVSNVL---KEIKILNIFGVIKGFV---------------------EPDHYVVVGAQRDAW-GPG--------------- 295 (640)
T ss_dssp EECCEE---EEEEEEEEEEEECCSS---------------------EEEEEEEEEEECCCS-SCC---------------
T ss_pred EEEEEE---EeeeEEEEEEEEeCCc---------------------CCCCceeeecccCCC-CCC---------------
Confidence 552111 3455677776554420 001245555555544 111
Q ss_pred CccCCCCCCCCCCCCCCchhhHHHHHHHhhhh
Q 008587 262 GRYCAPDPEQDFSSGYEGKDVVLENLRQLCVF 293 (560)
Q Consensus 262 GrYC~~dpd~~~~~~~~G~dvv~E~lRqlCi~ 293 (560)
+ .++.+|.-+++|.+|.|-..
T Consensus 296 ----a-------~D~~sG~a~lLe~ar~l~~~ 316 (640)
T 3kas_A 296 ----A-------AKSGVGTALLLKLAQMFSDM 316 (640)
T ss_dssp ----T-------TTTHHHHHHHHHHHHHHHHH
T ss_pred ----C-------CcCcHHHHHHHHHHHHHHHh
Confidence 1 13579999999999998754
No 20
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.81 E-value=2.2e-10 Score=104.56 Aligned_cols=105 Identities=25% Similarity=0.433 Sum_probs=69.5
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecC--CccceeeeCCC---------CccCCCCCCCCC
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGD--GYSHCEVSGPG---------KCKINNGGCWHE 486 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gd--g~~~C~di~~~---------eC~~~~~~C~~~ 486 (560)
+|+|||.. ..|. + +.|+|+.++|.|.|++ ||.++ +.+ |.+.... .|......|...
T Consensus 2 ~dideC~~--~pC~-----n-g~C~n~~g~y~C~C~~----G~~g~~~~~~-C~~~~~~~C~~~~~g~~C~~~~~~c~~~ 68 (147)
T 2w86_A 2 ADIDECES--SPCI-----N-GVCKNSPGSFICECSS----ESTLDPTKTI-CIETIKGTCWQTVIDGRCEININGATLK 68 (147)
T ss_dssp CCCCGGGG--CCSB-----T-SEEEEETTEEEEECCT----TEEECTTSSB-EEECCCEEEEEEEETTEEEEEEEEEECH
T ss_pred CcCccCcC--CCCC-----C-CEeECCCCCEEeECCC----CcccCCCCCe-ecCCCCCcccCCCCCCccccCCCccccC
Confidence 48899975 3573 3 6899999999999999 88864 333 7664111 222111112111
Q ss_pred CcCCCcccccccC-CC----------ceeeCCCCccc-CCCcccccCCCCCCC-CCCCCCCccCCCCCcc
Q 008587 487 SKDGHTYSACLDS-EN----------GKCQCPPGFKG-DGVKSCILMNAKRGK-PVSALSVAAKTPGEAM 543 (560)
Q Consensus 487 ~~~~~~~~~C~n~-gs----------~~C~C~~Gf~~-dg~~sC~didEC~~~-~~C~~~~~~~~~g~~~ 543 (560)
. .|.+. ++ |.|.|++||++ +| +.|+|||||... ..|.++.|.|++|++.
T Consensus 69 ~-------~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g-~~C~dideC~~~~~~C~~g~C~n~~g~y~ 130 (147)
T 2w86_A 69 S-------QCCSSLGAAWGSPCTLCQVDPICGKGYSRIKG-TQCEDIDECEVFPGVCKNGLCVNTRGSFK 130 (147)
T ss_dssp H-------HHHTTTCSEETTTTEECCCCTTTCTTEEEEET-TEEEECCHHHHSTTCSSSSEEEEETTEEE
T ss_pred C-------ccccCcCcccCCCcccCCCcccCCCccccCCC-CccCccccccCCCCCCCCCEEECCCCCEE
Confidence 0 14444 33 78899999985 46 469999999853 4688778999999763
No 21
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.79 E-value=1e-09 Score=115.65 Aligned_cols=81 Identities=28% Similarity=0.719 Sum_probs=22.9
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
.|+|||..++++| .+.|.++.|+|.|.|++ ||. .++.+ |+++ +||. .++.|.+.
T Consensus 1 ~~~~~C~~~~~~c-------~~~C~~~~g~~~C~C~~----G~~l~~~~~~-C~d~--~eC~-~~~~C~~~--------- 56 (386)
T 3v65_B 1 TGEENCNVNNGGC-------AQKCQMIRGAVQCTCHT----GYRLTEDGRT-CQDV--NECA-EEGYCSQG--------- 56 (386)
T ss_dssp ------------------------------------------------------------------CCTTE---------
T ss_pred CCcCcccCCCCCC-------CCCCcCCCCCcEeECCC----CceECCCCCc-cCcc--ceeC-CcCcccCc---------
Confidence 3789999999999 46899999999999999 776 55666 9999 9997 45789865
Q ss_pred cccC-CCceeeCCCCcc--cCCCcccccCCC
Q 008587 496 CLDS-ENGKCQCPPGFK--GDGVKSCILMNA 523 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~--~dg~~sC~didE 523 (560)
|.|+ ++|.|.|++||. .++ ++|..+++
T Consensus 57 C~~~~g~~~C~C~~g~~l~~d~-~~C~~~~~ 86 (386)
T 3v65_B 57 CTNSEGAFQCWCEAGYELRPDR-RSCKALGP 86 (386)
T ss_dssp EC-----CCEECCTTEEECTTS-SCEEECSS
T ss_pred CCCCCCCCeEEECCCceEcCCC-CeECCccc
Confidence 9999 999999999998 455 56987765
No 22
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.78 E-value=6.9e-09 Score=109.89 Aligned_cols=80 Identities=39% Similarity=0.771 Sum_probs=64.7
Q ss_pred cccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec-CCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC
Q 008587 421 NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG-DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS 499 (560)
Q Consensus 421 dEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g-dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~ 499 (560)
|||..++++| .+.|.|++++|.|.|++ ||.. ++.+ |+++ +||.. ++.|.+. |.|+
T Consensus 1 ~eC~~~~~~c-------~~~C~~~~~~y~C~C~~----G~~~~~~~~-C~di--deC~~-~~~C~~~---------C~n~ 56 (400)
T 3p5b_L 1 NECLDNNGGC-------SHVCNDLKIGYECLCPD----GFQLVAQRR-CEDI--DECQD-PDTCSQL---------CVNL 56 (400)
T ss_dssp CCTTTTGGGC-------SSEEEECSSSEEEECCT----TEEECSSSC-EEEC--CCCST-TSSCSSC---------CBCC
T ss_pred CcccCCCCCC-------CCEeECCCCCeEEECCC----CCCcCCCCc-ccCc--hhhhc-cCCCCCc---------cCCC
Confidence 6898888888 47999999999999999 8874 4555 9999 99983 5688763 9999
Q ss_pred -CCceeeCCCCcccCC-CcccccCCCC
Q 008587 500 -ENGKCQCPPGFKGDG-VKSCILMNAK 524 (560)
Q Consensus 500 -gs~~C~C~~Gf~~dg-~~sC~didEC 524 (560)
++|.|.|++||.++. .++|.++++.
T Consensus 57 ~g~~~C~C~~g~~~~~~~~~C~~~~~~ 83 (400)
T 3p5b_L 57 EGGYKCQCEEGFQLDPHTKACKAVGSI 83 (400)
T ss_dssp SSSCBCCCCTTCCCCTTTSSCCCSTTS
T ss_pred ccceeeeccccccccccccceeecccc
Confidence 999999999998542 1568776543
No 23
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.78 E-value=1.3e-09 Score=104.06 Aligned_cols=88 Identities=27% Similarity=0.664 Sum_probs=34.9
Q ss_pred CCCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 416 GDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 416 ~c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
.|.|+|+|.. ..| .+.+.|+++.++|.|.|++ ||.|.. |++.-.++|...+++|.+.
T Consensus 38 ~c~dideC~~--~pC-----~ngg~C~n~~g~y~C~C~~----Gf~G~~---Ce~~i~deC~~~~~~C~~~--------- 94 (195)
T 1nfu_B 38 KYKDGDQCET--SPC-----QNQGKCKDGLGEYTCTCLE----GFEGKN---CELFTRKLCSLDNGDCDQF--------- 94 (195)
T ss_dssp ---------------------------------------------------------CCGGGTGGGGCSSE---------
T ss_pred cCCCCcccCC--CCC-----CCCCEeECCCCCeeEeCCC----Cceecc---ccccccccccCCCCCCCCE---------
Confidence 5789999974 346 4568999999999999999 898643 9863126798777788763
Q ss_pred cccC-CCceeeCCCCcc--cCCCcccccCC--CCCCC
Q 008587 496 CLDS-ENGKCQCPPGFK--GDGVKSCILMN--AKRGK 527 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~--~dg~~sC~did--EC~~~ 527 (560)
|.++ ++|.|.|++||+ ++| +.|.+++ .|...
T Consensus 95 C~n~~gsy~C~C~~Gy~l~~dG-~~C~~~~~~PC~~~ 130 (195)
T 1nfu_B 95 CHEEQNSVVCSCARGYTLADNG-KACIPTGPYPCGKQ 130 (195)
T ss_dssp EEEETTEEEEECCTTEEECTTS-SCEEESSSSCTTCC
T ss_pred eECCCCCeEEECCCCceeCCCC-CccccCCCCCCCCC
Confidence 9999 999999999998 566 5699876 35443
No 24
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.78 E-value=3.8e-09 Score=95.91 Aligned_cols=81 Identities=32% Similarity=0.778 Sum_probs=63.5
Q ss_pred CCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceee-eCCCC---ccCCCCCCCCCCcCCCc
Q 008587 417 DVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV-SGPGK---CKINNGGCWHESKDGHT 492 (560)
Q Consensus 417 c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~d-i~~~e---C~~~~~~C~~~~~~~~~ 492 (560)
+.|+|+|.. ..| .+.+.|+++.++|.|.|++ ||.|.. |++ + ++ |...+++|.+.
T Consensus 44 c~did~C~~--~pC-----~n~g~C~~~~g~y~C~C~~----G~~G~~---C~~~~--~~c~~c~~~~~~C~~~------ 101 (142)
T 2c4f_L 44 YSDGDQCAS--SPC-----QNGGSCKDQLQSYICFCLP----AFEGRN---CETHK--DDQLICVNENGGCEQY------ 101 (142)
T ss_dssp HTTCCGGGG--CCC-----CTTCEEEEETTEEEEECCT----TEESTT---SCEEG--GGCCSTTTGGGGCSSE------
T ss_pred CCccCcCcC--CCc-----CCCCEEeCCCCCEEeeCCC----CccCCc---cccCc--cccccccCCCCCccCE------
Confidence 568999974 346 4568999999999999999 898654 986 5 55 44445566643
Q ss_pred ccccccC-C-CceeeCCCCcc--cCCCcccccCCC
Q 008587 493 YSACLDS-E-NGKCQCPPGFK--GDGVKSCILMNA 523 (560)
Q Consensus 493 ~~~C~n~-g-s~~C~C~~Gf~--~dg~~sC~didE 523 (560)
|+++ + +|.|.|++||+ ++| +.|.+++|
T Consensus 102 ---C~~~~g~~y~C~C~~Gy~l~~dG-~~C~~~~e 132 (142)
T 2c4f_L 102 ---CSDHTGTKRSCRCHEGYSLLADG-VSCTPTVE 132 (142)
T ss_dssp ---EECCTTSCCEEECCTTEEECTTS-SCEEESSS
T ss_pred ---eECCCCCCEEEECCCCceECCCC-CCCCCCCc
Confidence 9999 8 99999999998 567 56999988
No 25
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.77 E-value=8.6e-09 Score=105.57 Aligned_cols=114 Identities=24% Similarity=0.596 Sum_probs=79.5
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCcccee-eeCCCCccCC-CCCCCCCCcCCCcccc
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKIN-NGGCWHESKDGHTYSA 495 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~eC~~~-~~~C~~~~~~~~~~~~ 495 (560)
.|+|+|..++ | .+.+.|.++.++|.|.|++ ||.|.. |+ ++ +||... +++|.+.
T Consensus 3 ~d~~~C~~~p--C-----~~~g~C~~~~~~~~C~C~~----g~~g~~---C~~~~--~eC~~~~~~~C~~~--------- 57 (317)
T 3h5c_B 3 KGGSPCISQP--C-----LHNGSCQDSIWGYTCTCSP----GYEGSN---CELAK--NECHPERTDGCQHF--------- 57 (317)
T ss_dssp ---CCTTSCC--C-----TTTCCCCCCSSSCCCCCSS----SCCSSS---SCCCS--SSCCTTCTTSCSSE---------
T ss_pred ccCCcCCCCC--C-----CCCCEeECCCCCeEEECCC----CCcCCc---cccCc--ccCCCCCCCCCcCc---------
Confidence 4678886432 5 4678999999999999999 898654 98 88 999863 3688763
Q ss_pred cccC-CCceeeCCCCcccC-CCcccccCCCCCCCCCCCCCCccCCCCCccceeeee-----EEEecCccC
Q 008587 496 CLDS-ENGKCQCPPGFKGD-GVKSCILMNAKRGKPVSALSVAAKTPGEAMNALVVE-----IFCISGTMI 558 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~d-g~~sC~didEC~~~~~C~~~~~~~~~g~~~~~~~~~-----~~~~~~~~~ 558 (560)
|.|+ ++|.|.|++||+++ ..++|.+++||.-...-..+ ..-.+++++-.+... .|| +||+|
T Consensus 58 C~~~~g~~~C~C~~g~~~~~~~~~C~~~~~c~cg~~~~~G-~~a~~~~~Pw~v~l~~~~~~~~C-gGtLI 125 (317)
T 3h5c_B 58 CLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSEK-RAPDLQDLPWQVKLTNSEGKDFC-GGVII 125 (317)
T ss_dssp EECCSSSCEEECCTTEECCTTSSCCEECSSCCCCCCSCCC-SSCCTTCCTTEEEEECSSSCEEE-EEEEE
T ss_pred cccCCCeeEEeccccccccccccccccccccccccccccc-ccCccCCCCcEEEEeccCCceee-eeEEe
Confidence 9999 99999999999864 23679999999643211112 234567777655443 244 56655
No 26
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.70 E-value=1.7e-08 Score=90.68 Aligned_cols=97 Identities=30% Similarity=0.777 Sum_probs=70.4
Q ss_pred eeeeccc-CcccCCCCccccCCCCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCcccee-eeCC
Q 008587 396 VLKAICS-GFEETTEPAVCLSGDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGP 473 (560)
Q Consensus 396 v~~~iC~-g~~~~~~p~~C~~~c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~ 473 (560)
.|++.|. ||.. ..| ..+++||..+ .| .+.+.|+++.++|.|.|++ ||.|.. |+ ++
T Consensus 27 ~~~C~C~~Gy~G----~~C---~~~~~~C~~~--~C-----~~~~~C~~~~g~~~C~C~~----G~~G~~---C~~~~-- 83 (135)
T 2vj3_A 27 SFECQCLQGYTG----PRC---EIDVNECVSN--PC-----QNDATCLDQIGEFQCICMP----GYEGVH---CEVNT-- 83 (135)
T ss_dssp SEEEECCTTEES----TTS---CEECCTTTTC--CC-----CSSCEEEECSSCEEEECCT----TEESSS---SCEEC--
T ss_pred CEEEECCCCCcC----Ccc---cccCccCCCC--CC-----CCCCEEeCCCCCceeeCCC----CCcCCc---ceecC--
Confidence 4678886 6652 123 1478898643 35 4568999999999999999 998754 86 77
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccc-cCCCCCCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCI-LMNAKRGK 527 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~-didEC~~~ 527 (560)
++|.. ..|...+. |+++ ++|.|.|++||+|. .|+ +||||...
T Consensus 84 ~~C~~--~~C~~~g~-------C~~~~g~~~C~C~~G~~G~---~C~~~i~~C~~~ 127 (135)
T 2vj3_A 84 DECAS--SPCLHNGR-------CLDKINEFQCECPTGFTGH---LCQVDLHHILDA 127 (135)
T ss_dssp CTTTT--CCSTTTCE-------EEECSSCEEEECCTTEESS---SSCEECC-----
T ss_pred CcccC--CCcCCCCE-------eECCCCCeEEECCCCCcCC---ccCccCccccCC
Confidence 99974 47876654 9999 99999999999976 385 99999865
No 27
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.70 E-value=9.6e-09 Score=92.83 Aligned_cols=88 Identities=24% Similarity=0.511 Sum_probs=61.9
Q ss_pred CCCcccceecC--CceEEEccCCCCceeecCCccceeee-----------CCCCccCCCCCCCCCCcCCCcccccc----
Q 008587 435 TANVTACKDTF--RGRVCECPLVDGVQFKGDGYSHCEVS-----------GPGKCKINNGGCWHESKDGHTYSACL---- 497 (560)
Q Consensus 435 ~~~~~~C~nt~--gsy~C~C~~~~g~g~~gdg~~~C~di-----------~~~eC~~~~~~C~~~~~~~~~~~~C~---- 497 (560)
+.+.+.|+++. ++|.|.|++ ||.|.. |+.+ ..++|. ...|...+. |+
T Consensus 8 C~~~g~C~~~~~~g~~~C~C~~----G~~G~~---C~~~~~~~~~~~~c~~~~~C~--~~~C~~~g~-------C~~~~~ 71 (143)
T 4d90_A 8 CENGGICLPGLADGSFSCECPD----GFTDPN---CSSVVEVASDEEEPTSAGPCT--PNPCHNGGT-------CEISEA 71 (143)
T ss_dssp CGGGCEEEC-----CCEEECCT----TCCTTT---TCSCCCCTTTTTSCCCCCTTS--SCCCCTTCE-------EEECCC
T ss_pred CCCCCEeeCCCCCCCEEeECCC----CCCCCC---CccCccccccccccccCCcCC--CCCCCCCCE-------ecCCCc
Confidence 45678999876 689999999 888654 6542 015564 345766543 88
Q ss_pred ---cC-CCceeeCCCCcccCCCcccc-cCCCCCCCCCCC-CCCccCCCCCc
Q 008587 498 ---DS-ENGKCQCPPGFKGDGVKSCI-LMNAKRGKPVSA-LSVAAKTPGEA 542 (560)
Q Consensus 498 ---n~-gs~~C~C~~Gf~~dg~~sC~-didEC~~~~~C~-~~~~~~~~g~~ 542 (560)
++ ++|.|.|++||.|. .|+ +||||... .|. .+.|.+++|++
T Consensus 72 ~~~~~~~~~~C~C~~G~~G~---~C~~~i~~C~~~-~C~~~~~C~~~~g~~ 118 (143)
T 4d90_A 72 YRGDTFIGYVCKCPRGFNGI---HCQHNINECEVE-PCKNGGICTDLVANY 118 (143)
T ss_dssp EETTEECCEEEECCTTEEST---TSCEECCTTTTC-CSCTTCEEEEETTEE
T ss_pred cccCCCCCeEeECcCCCcCC---CcccCCCcCCCC-CCCCCCEeECCCCCe
Confidence 77 89999999999865 397 99999865 464 46677877764
No 28
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.66 E-value=8.8e-09 Score=84.48 Aligned_cols=64 Identities=19% Similarity=0.403 Sum_probs=53.6
Q ss_pred eeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccccCCCCCCCCCCCCCCccCCCCCcc
Q 008587 468 CEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCILMNAKRGKPVSALSVAAKTPGEAM 543 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~didEC~~~~~C~~~~~~~~~g~~~ 543 (560)
|+++ ++|.. +.+|.+ +. |+|+ ++|.|.|++||+++| +.|+|||||.....|.++.|.|++|++.
T Consensus 2 C~di--deC~~-~~~C~~-g~-------C~n~~g~y~C~C~~Gy~~~g-~~C~dideC~~~~~C~~~~C~n~~g~y~ 66 (82)
T 1emn_A 2 AVDM--DECKE-PDVCKH-GQ-------CINTDGSYRCECPFGYILAG-NECVDTDECSVGNPCGNGTCKNVIGGFE 66 (82)
T ss_dssp CCCC--CSSSS-TTSCSS-SE-------ECCCSSCCCEECCTTEEEET-TEEEECCGGGTCCTTSSSCEEECSSSEE
T ss_pred CCcc--ccCCC-CCCcCC-CE-------EEecCCCEEEECCCCeECCC-CccCCcccccCCCCCCCCEeECCCCCEE
Confidence 8888 99986 567864 33 9999 999999999999877 4699999998666788788999999763
No 29
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.64 E-value=4.7e-09 Score=94.35 Aligned_cols=84 Identities=29% Similarity=0.710 Sum_probs=32.9
Q ss_pred CCCCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccc
Q 008587 416 GDVETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSA 495 (560)
Q Consensus 416 ~c~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~ 495 (560)
.|.++|+|..+ .| .+.+.|+++.++|.|.|++ ||.|.. |++.-.++|...+++|.+.
T Consensus 38 ~c~d~d~C~~~--pC-----~n~g~C~~~~~~y~C~C~~----G~~G~~---C~~~i~d~C~~~~~~C~~~--------- 94 (134)
T 2vh0_B 38 KYKDGDQCETS--PC-----QNQGKCKDGLGEYTCTCLE----GFEGKN---CELFTRKLCSLDNGDCDQF--------- 94 (134)
T ss_dssp ---------------------------------------------------------CCGGGTGGGGCSSE---------
T ss_pred cCCCcCcCCCC--CC-----CCcCCcccCCCCEEeeCCC----CccCCc---cccCCCCccccCCCCCCCE---------
Confidence 46789999743 36 4568999999999999999 898653 9863126798766778763
Q ss_pred cccC-CCceeeCCCCcc--cCCCcccccCCC
Q 008587 496 CLDS-ENGKCQCPPGFK--GDGVKSCILMNA 523 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~--~dg~~sC~didE 523 (560)
|+++ ++|.|.|++||+ ++| +.|.++++
T Consensus 95 C~~~~g~y~C~C~~Gy~l~~~g-~~C~~~~~ 124 (134)
T 2vh0_B 95 CHEEQNSVVCSCARGYTLADNG-KACIPTGP 124 (134)
T ss_dssp EEEETTEEEEECCTTEEECTTS-SCEEESSS
T ss_pred eECCCCCEEEECCCCcEECCCC-CccCcCCC
Confidence 9999 999999999998 556 56998865
No 30
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.55 E-value=1.3e-08 Score=96.32 Aligned_cols=87 Identities=14% Similarity=0.296 Sum_probs=68.3
Q ss_pred ccceecCCceEEEccCCCCceeecC-CccceeeeCCCCccCC--CCCCCCCCcCCCcccccccC-C-----CceeeCCCC
Q 008587 439 TACKDTFRGRVCECPLVDGVQFKGD-GYSHCEVSGPGKCKIN--NGGCWHESKDGHTYSACLDS-E-----NGKCQCPPG 509 (560)
Q Consensus 439 ~~C~nt~gsy~C~C~~~~g~g~~gd-g~~~C~di~~~eC~~~--~~~C~~~~~~~~~~~~C~n~-g-----s~~C~C~~G 509 (560)
+.|+++.++|.|.|++ ||.++ +.. |+++ ++|... ..+|.+.+. |+++ + +|.|.|++|
T Consensus 16 g~C~~~~g~~~C~C~~----G~~g~~~~~-C~~i--d~C~~~~~~~~C~~~~~-------C~~~~~~~~~g~y~C~C~~G 81 (186)
T 1z1y_A 16 GQLVQMSNHFXCMCNE----GLVHLSENT-CEEX--NECXXETLGXACGEFGQ-------CIENPDPAQVNMYXCGCIEG 81 (186)
T ss_dssp EEEEECSSCEEEEECT----TEEEEETTE-EEEC--CCCSGGGTTSEEETTEE-------EEECSSTTSSCSEEEEECTT
T ss_pred CEeECCCCCeEeECCC----CCccCCCCc-cCCC--CcccCCCCCCCCCCCCE-------eecCCCCcCCCCEECCCCCC
Confidence 4899999999999999 89875 444 9999 999854 567876644 9887 3 899999999
Q ss_pred cccCCCcccccCCCCCCCCCCC-CCCcc----CCCCCc
Q 008587 510 FKGDGVKSCILMNAKRGKPVSA-LSVAA----KTPGEA 542 (560)
Q Consensus 510 f~~dg~~sC~didEC~~~~~C~-~~~~~----~~~g~~ 542 (560)
|+|++. .|. +|||... .|. .+.|. +++|++
T Consensus 82 ~~g~~~-~C~-~d~C~~~-~C~~~g~C~~~~~~~~g~~ 116 (186)
T 1z1y_A 82 YTLXED-TCV-LDVCQYX-NCGESGECIVEYLSEIQSA 116 (186)
T ss_dssp EEEETT-EEE-EGGGTTC-CCCTTEEEEEEEETTEEEE
T ss_pred CccCCC-CCC-CCcCcCC-CCCCCCEEeeCCcCCCCCc
Confidence 998873 477 8999876 476 55666 666654
No 31
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.54 E-value=5.1e-08 Score=111.92 Aligned_cols=82 Identities=38% Similarity=0.765 Sum_probs=68.6
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec-CCccceeeeCCCCccCCCCCCCCCCcCCCcccccc
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG-DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACL 497 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g-dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~ 497 (560)
+++||..++++| .+.|.|+.++|.|.|++ ||.. ++.+ |+++ +||. .++.|.+. |.
T Consensus 311 ~~~~C~~~~~~C-------~~~C~~~~~~y~C~C~~----Gy~l~~g~~-C~di--deC~-~~~~C~~~---------C~ 366 (791)
T 3m0c_C 311 GTNECLDNNGGC-------SHVCNDLKIGYECLCPD----GFQLVAQRR-CEDI--DECQ-DPDTCSQL---------CV 366 (791)
T ss_dssp SCCSTTTGGGGC-------SSEEEECSBSEEEECCT----TCEEETTTE-EECC--CCCS-SSSSCTTT---------CC
T ss_pred ccccccccccCc-------cccccCCCCCcccCCCC----CCccCCCCc-cccC--cccC-CCCCCCCe---------ee
Confidence 568888777888 47899999999999999 7764 5666 9999 9998 46678754 99
Q ss_pred cC-CCceeeCCCCccc--CCCcccccCCCCC
Q 008587 498 DS-ENGKCQCPPGFKG--DGVKSCILMNAKR 525 (560)
Q Consensus 498 n~-gs~~C~C~~Gf~~--dg~~sC~didEC~ 525 (560)
|+ ++|.|.|++||++ ++ ++|.+++++.
T Consensus 367 n~~gsy~C~C~~Gy~l~~~~-~~C~~~~~~p 396 (791)
T 3m0c_C 367 NLEGGYKCQCEEGFQLDPHT-KACKAVGSIA 396 (791)
T ss_dssp BCSSCBCCCCCSSEECCSSC-CCCEETTSCC
T ss_pred cCCCCceeecCCCCEeCCCC-ceeeeccccc
Confidence 99 9999999999985 44 6799998875
No 32
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.47 E-value=2.9e-07 Score=82.98 Aligned_cols=63 Identities=37% Similarity=0.789 Sum_probs=52.5
Q ss_pred CCCCcccce-------ecCCceEEEccCCCCceeecCCcccee-eeCCCCccCCCCCCCCCCcCCCcccccccC-CCcee
Q 008587 434 KTANVTACK-------DTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKC 504 (560)
Q Consensus 434 ~~~~~~~C~-------nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C 504 (560)
++.+.+.|+ |+.++|.|.|++ ||.|.. |+ ++ ++|. ...|...+. |+++ ++|.|
T Consensus 59 ~C~~~g~C~~~~~~~~~~~~~~~C~C~~----G~~G~~---C~~~i--~~C~--~~~C~~~~~-------C~~~~g~~~C 120 (143)
T 4d90_A 59 PCHNGGTCEISEAYRGDTFIGYVCKCPR----GFNGIH---CQHNI--NECE--VEPCKNGGI-------CTDLVANYSC 120 (143)
T ss_dssp CCCTTCEEEECCCEETTEECCEEEECCT----TEESTT---SCEEC--CTTT--TCCSCTTCE-------EEEETTEEEE
T ss_pred CCCCCCEecCCCccccCCCCCeEeECcC----CCcCCC---cccCC--CcCC--CCCCCCCCE-------eECCCCCeEe
Confidence 345678898 788999999999 898654 97 88 9998 446877654 9999 99999
Q ss_pred eCCCCcccCC
Q 008587 505 QCPPGFKGDG 514 (560)
Q Consensus 505 ~C~~Gf~~dg 514 (560)
.|++||+|+.
T Consensus 121 ~C~~G~~G~~ 130 (143)
T 4d90_A 121 ECPGEFMGRN 130 (143)
T ss_dssp ECCTTCBSTT
T ss_pred ECCCCCccCC
Confidence 9999999886
No 33
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.42 E-value=4.1e-08 Score=84.75 Aligned_cols=68 Identities=22% Similarity=0.429 Sum_probs=36.9
Q ss_pred eeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCccc-CCCcccccCCCCCCCCCCCCCCcc
Q 008587 459 QFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKG-DGVKSCILMNAKRGKPVSALSVAA 536 (560)
Q Consensus 459 g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~-dg~~sC~didEC~~~~~C~~~~~~ 536 (560)
+|.++. | ++ +||...+++|.+. |+++ ++|.|.|++||++ ++ +.|+|||||.....|. +.|.
T Consensus 21 ~~~~~~---C-d~--neC~~~~~~C~~~---------C~n~~g~y~C~C~~Gy~g~~g-~~C~dideC~~~~~C~-~~C~ 83 (107)
T 2w2n_E 21 LYFQGA---M-GT--NECLDNNGGCSYV---------CNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCS-QLCV 83 (107)
T ss_dssp CCCSCC---B-SC--CGGGTGGGGCSSE---------EECCSBSCEEECCTTCEEETT-TEEEC----------------
T ss_pred CcCCCC---C-cC--ccCcCCCCCCCCE---------eEeCCCCeEEECCCCccccCC-CccccccccCCCCCcC-Ceee
Confidence 555543 7 66 9999877888643 9999 9999999999997 44 5699999998645686 6789
Q ss_pred CCCCCcc
Q 008587 537 KTPGEAM 543 (560)
Q Consensus 537 ~~~g~~~ 543 (560)
|++|++.
T Consensus 84 n~~gsy~ 90 (107)
T 2w2n_E 84 NLEGGYK 90 (107)
T ss_dssp -------
T ss_pred cCCCCEE
Confidence 9999863
No 34
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.36 E-value=2.5e-07 Score=104.92 Aligned_cols=82 Identities=39% Similarity=0.759 Sum_probs=66.8
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec-CCccceeeeCCCCccCCCCCCCCCCcCCCcccccc
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG-DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACL 497 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g-dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~ 497 (560)
+++||..++++| .+.|.|+.++|.|.|++ ||.. ++.+ |+++ +||.. +++|.+. |.
T Consensus 293 ~~~eC~~~~~~C-------~~~C~~~~~~~~C~C~~----G~~~~~~~~-C~di--deC~~-~~~C~~~---------C~ 348 (699)
T 1n7d_A 293 GTNECLDNNGGC-------SHVCNDLKIGYECLCPD----GFQLVAQRR-CEDI--DECQD-PDTCSQL---------CV 348 (699)
T ss_dssp CCCCTTSSTTTS-------CTTCCCCTTCCCCCCCS----SSCCCSSSC-CCCC--CCCSS-SSSCTTT---------CC
T ss_pred ccccccccccCc-------CCCcccCCCCcEEeCCC----CeEcCCCCc-ccCc--cccCC-CCccccc---------cc
Confidence 688998888889 47899999999999999 7774 4555 9999 99974 4678754 99
Q ss_pred cC-CCceeeCCCCcccCC-CcccccCCCC
Q 008587 498 DS-ENGKCQCPPGFKGDG-VKSCILMNAK 524 (560)
Q Consensus 498 n~-gs~~C~C~~Gf~~dg-~~sC~didEC 524 (560)
|+ ++|.|.|++||+++. .++|.++++.
T Consensus 349 n~~g~y~C~C~~G~~~~~~~~~C~~~~~~ 377 (699)
T 1n7d_A 349 NLEGGYKCQCEEGFQLDPHTKACKAVGSI 377 (699)
T ss_dssp BCSSCBCCCCCSSCBCCSSCCCCBCCSSC
T ss_pred cCCCCeeeeeecccccCCCCCcccccccc
Confidence 99 999999999998532 2678877554
No 35
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.36 E-value=6.4e-08 Score=89.53 Aligned_cols=101 Identities=24% Similarity=0.429 Sum_probs=63.4
Q ss_pred ceeeeccc-CcccCCCCccccCCCCCCcc--cCCCCCCcCCCCCCCcccceecCC----ceEEEccCCC-----------
Q 008587 395 AVLKAICS-GFEETTEPAVCLSGDVETNE--CLDNNGGCWQDKTANVTACKDTFR----GRVCECPLVD----------- 456 (560)
Q Consensus 395 ~v~~~iC~-g~~~~~~p~~C~~~c~didE--C~~~~~~C~~~~~~~~~~C~nt~g----sy~C~C~~~~----------- 456 (560)
..|++.|. ||........ |.+++| |....+.|. ..+.+.|+++.+ +|.|.|++|+
T Consensus 22 gsy~C~C~~Gy~~~~~g~~----C~d~~~~~C~~~~~~c~---~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~ 94 (162)
T 1uzk_A 22 GSYICDCPPDFELNPTRVG----CVDTRSGNCYLDIRPRG---DNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPA 94 (162)
T ss_dssp TEEEEECCTTCEECTTSSB----EECCCCEEEEEEC-------------CEEEEEEEECHHHHHTTTCCEETTTTEECCC
T ss_pred CCEEEeCCCCCeECCCCCc----ccCCCCCcccCCCcccC---CCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCC
Confidence 45788996 6763222223 446666 875544441 113467887766 6777777732
Q ss_pred ------------CceeecCC--ccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccC
Q 008587 457 ------------GVQFKGDG--YSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGD 513 (560)
Q Consensus 457 ------------g~g~~gdg--~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~d 513 (560)
+.||.++. .. |++| |||...++.|.+. . |+|+ ++|.|.|++||+++
T Consensus 95 ~~~~~y~C~C~~g~G~~~~~~~~~-c~di--deC~~~~~~C~~g-~-------C~n~~gsy~C~C~~Gy~g~ 155 (162)
T 1uzk_A 95 VNTSEYKILCPGGEGFRPNPITVI-LEDI--DECQELPGLCQGG-K-------CINTFGSFQCRCPTGYYLN 155 (162)
T ss_dssp TTSHHHHHHCTTCTTEEECTTTCC-EEEC--CHHHHCGGGGBTS-E-------EEECSSCEEEECCTTCCBC
T ss_pred CCCCCceeECCCCCCcccCCCCCc-cCcc--ccccCCCCCcCCC-E-------eEcCCCCEEeeCCCCccCC
Confidence 22566542 34 8999 9999777789742 3 9999 99999999999974
No 36
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.35 E-value=5.6e-08 Score=85.27 Aligned_cols=85 Identities=27% Similarity=0.622 Sum_probs=61.4
Q ss_pred eeeeccc-CcccCCCCccccCCCCCCcccCC--CCCCcCCCCCCCcccceecCCceEEEccCCCCceeecC-Cccceeee
Q 008587 396 VLKAICS-GFEETTEPAVCLSGDVETNECLD--NNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGD-GYSHCEVS 471 (560)
Q Consensus 396 v~~~iC~-g~~~~~~p~~C~~~c~didEC~~--~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gd-g~~~C~di 471 (560)
.|++.|. ||.... .++++|.. .++.| .+.|++ .++|.|.|++ ||.++ +.. |+++
T Consensus 23 ~y~C~C~~Gy~g~~---------~~~~~C~~~C~~~~C-------~~~C~~-~~~y~C~C~~----Gy~~~~g~~-C~di 80 (118)
T 1dx5_I 23 SYLCVCAEGFAPIP---------HEPHRCQMFCNQTAC-------PADCDP-NTQASCECPE----GYILDDGFI-CTDI 80 (118)
T ss_dssp CEEEECCTTEEEET---------TEEEEEEECCCSSEE-------ECEECT-TSTTCEECCT----TEEEETTTE-EEEC
T ss_pred CEEeECCCCccccC---------CCCCccccccCCCCC-------CCcccC-CCCeEeECCC----CccCCCCCc-cccc
Confidence 4678886 665321 14556643 24455 267888 5899999999 88855 555 9999
Q ss_pred CCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCC
Q 008587 472 GPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDG 514 (560)
Q Consensus 472 ~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg 514 (560)
+||.. .++|. . .|+|+ ++|.|.|++||++++
T Consensus 81 --deC~~-~~~C~--~-------~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 81 --DECEN-GGFCS--G-------VCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp --CHHHH-CSSCS--S-------EEEECSSSEEEEECSSSSCEE
T ss_pred --cccCC-CCCCc--C-------eEEeCCCCEEEECCCCCccCC
Confidence 99986 36783 2 29999 999999999998643
No 37
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.29 E-value=8.2e-08 Score=79.31 Aligned_cols=62 Identities=19% Similarity=0.482 Sum_probs=50.4
Q ss_pred eeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccC---CCcccccCCCCCCC-CCCCCCCccCCCCCc
Q 008587 470 VSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGD---GVKSCILMNAKRGK-PVSALSVAAKTPGEA 542 (560)
Q Consensus 470 di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~d---g~~sC~didEC~~~-~~C~~~~~~~~~g~~ 542 (560)
|+ +||...++.|.+. . |+|+ ++|.|.|++||+++ | +.|+|||||... ..|.++.|.|++|++
T Consensus 2 di--deC~~~~~~C~~g-~-------C~n~~g~y~C~C~~Gy~~~~~~g-~~C~dideC~~~~~~C~~~~C~n~~g~y 68 (86)
T 1lmj_A 2 DI--DECRISPDLCGRG-Q-------CVNTPGDFECKCDEGYESGFMMM-KNCMDIDECQRDPLLCRGGVCHNTEGSY 68 (86)
T ss_dssp CC--CTTTTCSSTTTTS-C-------EEEETTEEEECCCSSEEECTTTS-SSEEECCHHHHCSSTTTTSEEEEETTEE
T ss_pred cc--ccccCCCCCCCCC-E-------EECCCCCEEeeCCCCcCccCCCC-CccCCcccccCCCCcCCCCEeEcCCCCE
Confidence 56 9999877789643 3 9999 99999999999853 5 569999999865 347777899999975
No 38
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.22 E-value=2.2e-07 Score=76.92 Aligned_cols=61 Identities=21% Similarity=0.531 Sum_probs=48.8
Q ss_pred eeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccC--CCcccccCCCCCCCCCCCCCCccCCCCCcc
Q 008587 470 VSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGD--GVKSCILMNAKRGKPVSALSVAAKTPGEAM 543 (560)
Q Consensus 470 di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~d--g~~sC~didEC~~~~~C~~~~~~~~~g~~~ 543 (560)
++ +||..+++.| ..+. |+++ ++|.|.|++||+++ | +.|+|||||... .|. +.|.|++|++.
T Consensus 2 di--deC~~~~~~C-~~~~-------C~n~~g~y~C~C~~G~~~~~~g-~~C~dideC~~~-~C~-~~C~n~~g~y~ 65 (87)
T 1z6c_A 2 DV--DECSLKPSIC-GTAV-------CKNIPGDFECECPEGYRYNLKS-KSCEDIDECSEN-MCA-QLCVNYPGGYT 65 (87)
T ss_dssp CS--CSSSSSSSSB-TTSS-------CCCBTTBCCCSSSTTCEEETTT-TEEECCCHHHHS-CCS-SEECCCSSSCC
T ss_pred cc--ccccCCCCCC-CCCE-------eECCCCCEEEECCCCceECCCC-CcCCCcCeeCCC-CCC-CEEEccCCCEE
Confidence 45 8998877778 4433 9999 99999999999853 5 569999999754 677 67899999864
No 39
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.17 E-value=3.7e-07 Score=72.24 Aligned_cols=47 Identities=30% Similarity=0.583 Sum_probs=40.4
Q ss_pred eeeeCCCCccCCCCCCCCCCcCCCcccccccC-C-CceeeCCCCcc--cCCCcccccCCCCCC
Q 008587 468 CEVSGPGKCKINNGGCWHESKDGHTYSACLDS-E-NGKCQCPPGFK--GDGVKSCILMNAKRG 526 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-g-s~~C~C~~Gf~--~dg~~sC~didEC~~ 526 (560)
..|+ +||...+++|.+. |.|+ + +|.|.|++||. .|+ ++|.|+|||.-
T Consensus 2 ~~d~--~eC~~~nggC~h~---------C~n~~g~s~~C~C~~Gy~L~~D~-~tC~d~dec~C 52 (69)
T 1kli_L 2 KDDQ--LICVNENGGCEQY---------CSDHTGTKRSCRCHEGYSLLADG-VSCTPTVEYPC 52 (69)
T ss_dssp CSCC--CCTTSGGGGCSSE---------EEEETTTEEEEECCTTEEECTTS-SCEEECSSSCT
T ss_pred Cccc--ccccCCCCCcCCE---------eEcCCCCCEEEeCCCCCeECCCC-CcccCcccccC
Confidence 4577 9999889999875 9999 8 89999999997 466 78999999963
No 40
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.12 E-value=6e-07 Score=67.75 Aligned_cols=44 Identities=27% Similarity=0.694 Sum_probs=37.4
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCcccccCCCCCCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCILMNAKRGK 527 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~didEC~~~ 527 (560)
|||...+++|.+. |.|+ ++|.|.|++||+ .|+ ++|.|||||.-.
T Consensus 2 dEC~~~~~~C~~~---------C~nt~Gsy~C~C~~Gy~L~~d~-~~C~didec~cg 48 (55)
T 2jkh_L 2 KLCSLDNGDCDQF---------CHEEQNSVVCSCARGYTLADNG-KACIPTGPYPCG 48 (55)
T ss_dssp CCTTTGGGGCSSE---------EEEETTEEEEECCTTEEECTTS-SCEEESSSSCTT
T ss_pred ccccCCCCCcCcE---------eEcCCCCeEEeCCCCCEECCCC-CeeccCccccCC
Confidence 7898777889764 9999 999999999998 566 679999999643
No 41
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.09 E-value=2.9e-07 Score=83.69 Aligned_cols=52 Identities=29% Similarity=0.620 Sum_probs=43.5
Q ss_pred eEEEccCCCCceeec-CCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCC
Q 008587 448 RVCECPLVDGVQFKG-DGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDG 514 (560)
Q Consensus 448 y~C~C~~~~g~g~~g-dg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg 514 (560)
|.|.|++ ||.+ ++.. |+++ +||...++.|.+. . |+|+ ++|.|.|++||+++.
T Consensus 88 ~~C~C~~----Gy~~~~g~~-C~di--deC~~~~~~C~~g-~-------C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 88 VDPICGK----GYSRIKGTQ-CEDI--DECEVFPGVCKNG-L-------CVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CCTTTCT----TEEEEETTE-EEEC--CHHHHSTTCSSSS-E-------EEEETTEEEEECCTTCCBCT
T ss_pred CcccCCC----ccccCCCCc-cCcc--ccccCCCCCCCCC-E-------EECCCCCEEeeCCCCCccCC
Confidence 7889999 8874 4555 9999 9999877889753 3 9999 999999999999763
No 42
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.07 E-value=2.4e-06 Score=67.59 Aligned_cols=46 Identities=30% Similarity=0.687 Sum_probs=40.3
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCC-ceEEEccCCCCceee--cCCccceeeeCCCCcc
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFR-GRVCECPLVDGVQFK--GDGYSHCEVSGPGKCK 477 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~g-sy~C~C~~~~g~g~~--gdg~~~C~di~~~eC~ 477 (560)
+|+|||..++++| .+.|+|+.| +|.|.|++ ||. .|+++ |.++ +||.
T Consensus 3 ~d~~eC~~~nggC-------~h~C~n~~g~s~~C~C~~----Gy~L~~D~~t-C~d~--dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGC-------EQYCSDHTGTKRSCRCHE----GYSLLADGVS-CTPT--VEYP 51 (69)
T ss_dssp SCCCCTTSGGGGC-------SSEEEEETTTEEEEECCT----TEEECTTSSC-EEEC--SSSC
T ss_pred cccccccCCCCCc-------CCEeEcCCCCCEEEeCCC----CCeECCCCCc-ccCc--cccc
Confidence 5899999999999 478999999 89999999 665 67877 9999 8885
No 43
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.99 E-value=3e-06 Score=89.48 Aligned_cols=58 Identities=28% Similarity=0.564 Sum_probs=47.8
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCccc-CCCcccccCCCCCCCCCCCCCCccCCCCCc
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKG-DGVKSCILMNAKRGKPVSALSVAAKTPGEA 542 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~-dg~~sC~didEC~~~~~C~~~~~~~~~g~~ 542 (560)
+||..++..|.+. |.|+ ++|.|.|++||++ +| +.|+|||||.....|.+ .|.|++|++
T Consensus 1 ~eC~~~~~~c~~~---------C~~~~~~y~C~C~~G~~~~~~-~~C~dideC~~~~~C~~-~C~n~~g~~ 60 (400)
T 3p5b_L 1 NECLDNNGGCSHV---------CNDLKIGYECLCPDGFQLVAQ-RRCEDIDECQDPDTCSQ-LCVNLEGGY 60 (400)
T ss_dssp CCTTTTGGGCSSE---------EEECSSSEEEECCTTEEECSS-SCEEECCCCSTTSSCSS-CCBCCSSSC
T ss_pred CcccCCCCCCCCE---------eECCCCCeEEECCCCCCcCCC-CcccCchhhhccCCCCC-ccCCCccce
Confidence 5788777777754 9999 9999999999985 44 56999999997667876 688998875
No 44
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=97.99 E-value=8.5e-06 Score=91.36 Aligned_cols=97 Identities=12% Similarity=0.174 Sum_probs=72.1
Q ss_pred EEEccCCCcCCCCCCCCCCcccccCCCCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCCCceeecCCCccccccc
Q 008587 67 AVTYPKENRKGCREFGDFGISFKAKPGALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSA 146 (560)
Q Consensus 67 ~lv~~~~~~~gC~~~~~~~~~~~~~~~~~~~IvLV~RG~CsF~~Kv~nAq~aGA~avIV~n~~~~~l~~m~~~~~~~~~~ 146 (560)
.|+|+. ....|.+.......+ ++.++|||++||.|.|.+|+.+++++||+++|++|+. ..+ ..
T Consensus 260 plv~~~-~~~~C~~~~l~~~~v----dl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~-~~~--~~--------- 322 (649)
T 3i6s_A 260 PVIYNK-TLSDCSSEELLSQVE----NPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDP-GVF--RS--------- 322 (649)
T ss_dssp EEECCT-TTTTCCCHHHHTTSS----SGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCG-GGG--GC---------
T ss_pred eeEecc-ccccccccccccccc----ccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCc-ccc--cc---------
Confidence 455533 567788643221111 1247999999999999999999999999999999886 211 10
Q ss_pred cccCccceeEEEEcHHHHHHHHHHHhCCCeEEEEEEe
Q 008587 147 KYIENITIPSALIDKSFGETLKKALSGGEMVNVNLDW 183 (560)
Q Consensus 147 ~~~~~i~IPsv~Is~~~G~~L~~~l~~~~~V~v~l~~ 183 (560)
....||+++|+.++|+.|++++.++...++++.+
T Consensus 323 ---~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~ 356 (649)
T 3i6s_A 323 ---ATFPNPGVVVNKKEGKQVINYVKNSVTPTATITF 356 (649)
T ss_dssp ---CCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEE
T ss_pred ---ccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEee
Confidence 1347999999999999999999987766666655
No 45
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.97 E-value=3.8e-06 Score=63.30 Aligned_cols=43 Identities=26% Similarity=0.647 Sum_probs=37.3
Q ss_pred cccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceeeeCCCCcc
Q 008587 421 NECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEVSGPGKCK 477 (560)
Q Consensus 421 dEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~di~~~eC~ 477 (560)
|||..++++| .+.|+|++|+|.|.|++ ||. .|+++ |+++ +||.
T Consensus 2 dEC~~~~~~C-------~~~C~nt~Gsy~C~C~~----Gy~L~~d~~~-C~di--dec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDC-------DQFCHEEQNSVVCSCAR----GYTLADNGKA-CIPT--GPYP 46 (55)
T ss_dssp CCTTTGGGGC-------SSEEEEETTEEEEECCT----TEEECTTSSC-EEES--SSSC
T ss_pred ccccCCCCCc-------CcEeEcCCCCeEEeCCC----CCEECCCCCe-eccC--cccc
Confidence 7898888899 47899999999999999 776 67777 9999 8885
No 46
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.94 E-value=1.1e-05 Score=91.49 Aligned_cols=85 Identities=22% Similarity=0.424 Sum_probs=61.0
Q ss_pred ccceecCC--ceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCccc-CC
Q 008587 439 TACKDTFR--GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKG-DG 514 (560)
Q Consensus 439 ~~C~nt~g--sy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~-dg 514 (560)
+.|++... .+.+.|+. +..+.... | ++ +||...+++|.+. |.|+ ++|.|.|++||++ ++
T Consensus 266 g~Ci~~~~~Cd~~~dC~d----gsDe~~~~-C-~~--~eC~~~~~~C~~~---------C~~~~~~~~C~C~~G~~~~~~ 328 (699)
T 1n7d_A 266 GECITLDKVCNMARDCRD----WSDEPIKE-C-GT--NECLDNNGGCSHV---------CNDLKIGYECLCPDGFQLVAQ 328 (699)
T ss_dssp SCCCCSSCCSCSSCCSSS----SCSCCCSS-C-CC--CCTTSSTTTSCTT---------CCCCTTCCCCCCCSSSCCCSS
T ss_pred CcEeCCcccccccceecC----cccccccc-c-cc--ccccccccCcCCC---------cccCCCCcEEeCCCCeEcCCC
Confidence 45554322 23556776 44333323 5 45 8998888888754 9999 9999999999996 45
Q ss_pred CcccccCCCCCCCCCCCCCCccCCCCCc
Q 008587 515 VKSCILMNAKRGKPVSALSVAAKTPGEA 542 (560)
Q Consensus 515 ~~sC~didEC~~~~~C~~~~~~~~~g~~ 542 (560)
+.|+|||||.....|. +.|.|++|++
T Consensus 329 -~~C~dideC~~~~~C~-~~C~n~~g~y 354 (699)
T 1n7d_A 329 -RRCEDIDECQDPDTCS-QLCVNLEGGY 354 (699)
T ss_dssp -SCCCCCCCCSSSSSCT-TTCCBCSSCB
T ss_pred -CcccCccccCCCCccc-cccccCCCCe
Confidence 5799999998766775 4688998875
No 47
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.91 E-value=3.7e-06 Score=62.39 Aligned_cols=40 Identities=33% Similarity=0.841 Sum_probs=33.4
Q ss_pred ccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCcccccCCCCC
Q 008587 476 CKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCILMNAKR 525 (560)
Q Consensus 476 C~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~didEC~ 525 (560)
|...+++|.+. |+|+ ++|.|.|++||+ .|+ ++|.|||||.
T Consensus 1 C~~~ng~C~~~---------C~n~~gs~~C~C~~Gy~L~~d~-~tC~dide~p 43 (51)
T 1kig_L 1 CSLDNGGCDQF---------CREERSEVRCSCAHGYVLGDDS-KSCVSTERFP 43 (51)
T ss_dssp CCTTTTSSSSC---------CCEETTEECCCCCTTEEECTTS-SCEEECSSSC
T ss_pred CCCCCCCcCCE---------eEcCCCCeEEeCCCCcEECCCC-CccccCCccc
Confidence 44567788765 9999 999999999998 566 6799999985
No 48
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.89 E-value=1.8e-06 Score=90.65 Aligned_cols=59 Identities=25% Similarity=0.629 Sum_probs=6.4
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCcccccCCCCCCCCCCCCCCccCCCCCcc
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCILMNAKRGKPVSALSVAAKTPGEAM 543 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~didEC~~~~~C~~~~~~~~~g~~~ 543 (560)
+||..++++|.+. |.+. ++|.|.|++||+ .+| +.|+|||||.....|.+. |.|++|++.
T Consensus 4 ~~C~~~~~~c~~~---------C~~~~g~~~C~C~~G~~l~~~~-~~C~d~~eC~~~~~C~~~-C~~~~g~~~ 65 (386)
T 3v65_B 4 ENCNVNNGGCAQK---------CQMIRGAVQCTCHTGYRLTEDG-RTCQDVNECAEEGYCSQG-CTNSEGAFQ 65 (386)
T ss_dssp ----------------------------------------------------------CCTTE-EC-----CC
T ss_pred CcccCCCCCCCCC---------CcCCCCCcEeECCCCceECCCC-CccCccceeCCcCcccCc-CCCCCCCCe
Confidence 8999888889864 9888 999999999998 456 569999999865678776 889988753
No 49
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.87 E-value=8.3e-06 Score=67.99 Aligned_cols=62 Identities=27% Similarity=0.582 Sum_probs=48.8
Q ss_pred ccceecCCceEEEccCCCCceeecCCcccee--eeCCCCccCCCCCCCCCCcCCCcccccccC---CCceeeCCCCcccC
Q 008587 439 TACKDTFRGRVCECPLVDGVQFKGDGYSHCE--VSGPGKCKINNGGCWHESKDGHTYSACLDS---ENGKCQCPPGFKGD 513 (560)
Q Consensus 439 ~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~--di~~~eC~~~~~~C~~~~~~~~~~~~C~n~---gs~~C~C~~Gf~~d 513 (560)
.-|+|..++|.|.|++ ||. . |+ ++ ++|.. .+|.+.+. |++. ++|.|.|++||.|.
T Consensus 23 ~pC~n~~~~y~C~C~~----G~~----~-C~~~~~--~~C~~--~pC~ngg~-------C~~~~~~~~~~C~C~~G~~G~ 82 (91)
T 1tpg_A 23 RPVLRSNRVEYCWCNS----GRA----Q-CHSVPV--KSCSE--PRCFNGGT-------CQQALYFSDFVCQCPEGFAGK 82 (91)
T ss_dssp EECSSSSCEEEEECSS----SCC----B-CCEECE--EECSS--CCSCTTCE-------EEEESSSSCEEEECCTTCBSS
T ss_pred CccccCCCCcEeECCC----CCc----c-cccCcC--CcccC--CCCCCCCE-------eecCCCCCCeEeECCCCCcCC
Confidence 3467888999999999 775 3 86 67 99984 46887654 9875 78999999999875
Q ss_pred CCcccc-cCCC
Q 008587 514 GVKSCI-LMNA 523 (560)
Q Consensus 514 g~~sC~-didE 523 (560)
.|+ +|||
T Consensus 83 ---~Ce~~ide 90 (91)
T 1tpg_A 83 ---SCEIDTRA 90 (91)
T ss_dssp ---SCCBCSSC
T ss_pred ---cCCcCCCC
Confidence 386 7876
No 50
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.81 E-value=4.3e-06 Score=62.54 Aligned_cols=41 Identities=34% Similarity=0.743 Sum_probs=33.7
Q ss_pred ccCCCCCCCCCCcCCCcccccccC-C-CceeeCCCCcc--cCCCcccccCCCCCC
Q 008587 476 CKINNGGCWHESKDGHTYSACLDS-E-NGKCQCPPGFK--GDGVKSCILMNAKRG 526 (560)
Q Consensus 476 C~~~~~~C~~~~~~~~~~~~C~n~-g-s~~C~C~~Gf~--~dg~~sC~didEC~~ 526 (560)
|...+++|.+. |.|+ + +|.|.|++||+ .|+ ++|.|+|||.-
T Consensus 2 C~~~nggC~~~---------C~n~~ggs~~C~C~~Gy~L~~Dg-~tC~d~dec~c 46 (53)
T 2bz6_L 2 CVNENGGCEQY---------CSDHTGTKRSCRCHEGYSLLADG-VSCTPTVEYPC 46 (53)
T ss_dssp TTSGGGGCSSE---------EEEETTTEEEEECCTTEEECTTS-SCEEECSSSCT
T ss_pred CcCCCCCcCCE---------eEcCCCCCEEeeCCCCCEECCCC-CcccCCccccC
Confidence 55567788765 9999 7 89999999998 566 67999999953
No 51
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.80 E-value=1.1e-05 Score=92.64 Aligned_cols=86 Identities=22% Similarity=0.407 Sum_probs=62.6
Q ss_pred ccceecCC--ceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCccc-CC
Q 008587 439 TACKDTFR--GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKG-DG 514 (560)
Q Consensus 439 ~~C~nt~g--sy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~-dg 514 (560)
+.|++... ...+.|+. ++.++... | ++ ++|...+++|.+. |.|+ ++|.|.|++||++ +|
T Consensus 284 G~Ci~~~~~Cd~~~dC~d----gsDe~~~~-C-~~--~~C~~~~~~C~~~---------C~~~~~~y~C~C~~Gy~l~~g 346 (791)
T 3m0c_C 284 GECITLDKVCNMARDCRD----WSDEPIKE-C-GT--NECLDNNGGCSHV---------CNDLKIGYECLCPDGFQLVAQ 346 (791)
T ss_dssp SCCCCSSCCSCSSCCSSS----SCSCCCTT-B-SC--CSTTTGGGGCSSE---------EEECSBSEEEECCTTCEEETT
T ss_pred CcccccccccCCcccccc----ccCccccc-c-cc--ccccccccCcccc---------ccCCCCCcccCCCCCCccCCC
Confidence 45655432 33567877 55444433 6 34 8898777778754 9999 9999999999986 55
Q ss_pred CcccccCCCCCCCCCCCCCCccCCCCCcc
Q 008587 515 VKSCILMNAKRGKPVSALSVAAKTPGEAM 543 (560)
Q Consensus 515 ~~sC~didEC~~~~~C~~~~~~~~~g~~~ 543 (560)
+.|+|||||.....|.+ .|.|++|++.
T Consensus 347 -~~C~dideC~~~~~C~~-~C~n~~gsy~ 373 (791)
T 3m0c_C 347 -RRCEDIDECQDPDTCSQ-LCVNLEGGYK 373 (791)
T ss_dssp -TEEECCCCCSSSSSCTT-TCCBCSSCBC
T ss_pred -CccccCcccCCCCCCCC-eeecCCCCce
Confidence 56999999986666765 6889998753
No 52
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.70 E-value=2.1e-05 Score=71.38 Aligned_cols=61 Identities=20% Similarity=0.421 Sum_probs=45.5
Q ss_pred eeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccccCCCCCCC-CCCCCCCc-cCCCCCcc
Q 008587 468 CEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCILMNAKRGK-PVSALSVA-AKTPGEAM 543 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~didEC~~~-~~C~~~~~-~~~~g~~~ 543 (560)
|.++ ++|. .++|.+.+. |+++ ++|.|.|++||+|. .|+++|||... ..|.+ .| .|++|++.
T Consensus 45 c~di--deC~--~~pC~n~g~-------C~~~~~~y~C~C~~G~~G~---~C~~~deC~~~~~~C~~-~C~~n~~g~y~ 108 (146)
T 1x7a_L 45 YVDG--DQCE--PNPCLNGGL-------CKDDINSYECWCQVGFEGK---NCELDATCNIKNGRCKQ-FCKTGADSKVL 108 (146)
T ss_dssp -------CCS--SCSSCTTCE-------EEECSSCEEEECCSSEEST---TTCEECCTTSGGGSCSS-BCCCCSSSCCC
T ss_pred CCCc--CcCC--CCCCCCCCE-------eECCCCCEEEecCCCCcCC---cCCCCccccCCCCCCcC-CCCCCCCCCEE
Confidence 8888 9998 457987654 9999 99999999999965 49999999874 46776 67 88888753
No 53
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=97.64 E-value=0.00012 Score=85.30 Aligned_cols=65 Identities=32% Similarity=0.472 Sum_probs=53.6
Q ss_pred CCCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCCCce-eecCCCccccccccccCccceeEEEEcHHHHHHHHH
Q 008587 93 GALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEAL-ITMDTPEEDISSAKYIENITIPSALIDKSFGETLKK 169 (560)
Q Consensus 93 ~~~~~IvLV~RG~CsF~~Kv~nAq~aGA~avIV~n~~~~~l-~~m~~~~~~~~~~~~~~~i~IPsv~Is~~~G~~L~~ 169 (560)
...++|||++||.|+|.+|+.+|+++||.++||+|+..+.. +.+. ....||+++|++.+|+.|+.
T Consensus 278 ~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~------------~~~~iP~~~i~~~~g~~l~~ 343 (926)
T 1xf1_A 278 DVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELP------------NVDQMPAAFISRKDGLLLKD 343 (926)
T ss_dssp TCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECC------------CSTTCCEEEECHHHHHHHHH
T ss_pred hcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccC------------ccccccEEEEeHHHHHHHHh
Confidence 44589999999999999999999999999999999875432 2221 13579999999999998885
No 54
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=97.63 E-value=7.4e-05 Score=79.98 Aligned_cols=77 Identities=25% Similarity=0.278 Sum_probs=59.4
Q ss_pred CCCCCcEEEEecCCC-----CHHHHHHHHHHcCCcEEEEEecCCCc-e---eecCCCccccccccccCccceeEEEEcHH
Q 008587 92 PGALPNFVLVDRGDC-----FFALKVWNAQKAGASAVLVADDIEEA-L---ITMDTPEEDISSAKYIENITIPSALIDKS 162 (560)
Q Consensus 92 ~~~~~~IvLV~RG~C-----sF~~Kv~nAq~aGA~avIV~n~~~~~-l---~~m~~~~~~~~~~~~~~~i~IPsv~Is~~ 162 (560)
+..+++|+|++||.| .|.+|+.+|+++||+++|||||...+ + ..+. ......||+++|+++
T Consensus 270 ~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~----------~~~~~~~p~~~v~~~ 339 (441)
T 1y9z_A 270 GNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVD----------ANSDITVPSVSVDRA 339 (441)
T ss_dssp CCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEEC----------TTCCCCSCEEEECHH
T ss_pred CCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccc----------cccCccccEEEEeHH
Confidence 356689999999987 89999999999999999999986421 1 1111 112468999999999
Q ss_pred HHHHHHHHHhCCCeEEEE
Q 008587 163 FGETLKKALSGGEMVNVN 180 (560)
Q Consensus 163 ~G~~L~~~l~~~~~V~v~ 180 (560)
+|+.|++++.+ .++++
T Consensus 340 ~g~~l~~~~~~--~~t~~ 355 (441)
T 1y9z_A 340 TGLALKAKLGQ--STTVS 355 (441)
T ss_dssp HHHHHHTTTTS--EEEEE
T ss_pred HHHHHHHHhcC--Ccccc
Confidence 99999998854 44443
No 55
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.54 E-value=3.7e-05 Score=56.90 Aligned_cols=41 Identities=27% Similarity=0.646 Sum_probs=34.2
Q ss_pred cCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceeeeCCCCcc
Q 008587 423 CLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEVSGPGKCK 477 (560)
Q Consensus 423 C~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~di~~~eC~ 477 (560)
|..++++| .+.|+|+.|+|.|.|++ ||. .|+++ |+++ +||.
T Consensus 1 C~~~ng~C-------~~~C~n~~gs~~C~C~~----Gy~L~~d~~t-C~di--de~p 43 (51)
T 1kig_L 1 CSLDNGGC-------DQFCREERSEVRCSCAH----GYVLGDDSKS-CVST--ERFP 43 (51)
T ss_dssp CCTTTTSS-------SSCCCEETTEECCCCCT----TEEECTTSSC-EEEC--SSSC
T ss_pred CCCCCCCc-------CCEeEcCCCCeEEeCCC----CcEECCCCCc-cccC--Cccc
Confidence 55678889 47899999999999999 776 77877 9999 8763
No 56
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.45 E-value=1.6e-05 Score=79.40 Aligned_cols=48 Identities=21% Similarity=0.521 Sum_probs=39.0
Q ss_pred eeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccccCCCCCC
Q 008587 469 EVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCILMNAKRG 526 (560)
Q Consensus 469 ~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~didEC~~ 526 (560)
+|+ |||....+.|+.++. |.|+ |+|.|.|++||.|+|. .|.|+|+...
T Consensus 3 ~Di--DEC~~~~~~C~~~a~-------C~Nt~Gsy~C~C~~Gy~GnG~-~C~d~d~PqR 51 (285)
T 1gl4_A 3 LAQ--QTCANNRHQCSVHAE-------CRDYATGFCCRCVANYTGNGR-QCVAEGSPQR 51 (285)
T ss_dssp ------CHHHHGGGSCTTEE-------EEECSSCEEEEECTTEEECSS-SEEETTCEEE
T ss_pred ccc--hhccCCCCCCCCCCE-------eEcCCCCeEEEcCCCCCCCCC-cCCCCCCCce
Confidence 356 999877788998765 9999 9999999999999994 6999999764
No 57
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.45 E-value=0.00011 Score=54.40 Aligned_cols=41 Identities=27% Similarity=0.701 Sum_probs=31.7
Q ss_pred CCCcccCCC--------CCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceee
Q 008587 418 VETNECLDN--------NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEV 470 (560)
Q Consensus 418 ~didEC~~~--------~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~d 470 (560)
.|+|||... ++.| .+.|+|+.|+|.|.|++ ||. .++++ |.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C-------~~~C~n~~Gsy~C~C~~----Gy~~~~d~~~-C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQC-------QHLCHNYVGGYFCSCRP----GYELQEDRHS-CQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTT-------SSEEEEETTEEEEECST----TCEECTTSSC-EEC
T ss_pred CccccccCcccccccccCCCC-------CCEeECCCCCeEEECCC----CCeECCCCCc-cCC
Confidence 488999764 3678 36899999999999999 776 45555 753
No 58
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=97.42 E-value=1.6e-05 Score=79.41 Aligned_cols=54 Identities=26% Similarity=0.611 Sum_probs=41.6
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCC
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGC 483 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C 483 (560)
.|+|||..+.+.|. .++.|.|+.|+|.|.|++ ||.|+|.. |.++ ++....++.|
T Consensus 3 ~DiDEC~~~~~~C~-----~~a~C~Nt~Gsy~C~C~~----Gy~GnG~~-C~d~--d~PqRvnGs~ 56 (285)
T 1gl4_A 3 LAQQTCANNRHQCS-----VHAECRDYATGFCCRCVA----NYTGNGRQ-CVAE--GSPQRVNGKV 56 (285)
T ss_dssp ----CHHHHGGGSC-----TTEEEEECSSCEEEEECT----TEEECSSS-EEET--TCEEEEEEEE
T ss_pred ccchhccCCCCCCC-----CCCEeEcCCCCeEEEcCC----CCCCCCCc-CCCC--CCCceeceeE
Confidence 48999998888895 358899999999999999 99999987 9998 7765444444
No 59
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.41 E-value=9.3e-05 Score=55.17 Aligned_cols=41 Identities=34% Similarity=0.818 Sum_probs=34.5
Q ss_pred cCCCCCCcCCCCCCCcccceecCC-ceEEEccCCCCceee--cCCccceeeeCCCCcc
Q 008587 423 CLDNNGGCWQDKTANVTACKDTFR-GRVCECPLVDGVQFK--GDGYSHCEVSGPGKCK 477 (560)
Q Consensus 423 C~~~~~~C~~~~~~~~~~C~nt~g-sy~C~C~~~~g~g~~--gdg~~~C~di~~~eC~ 477 (560)
|..++++| .+.|+|+.+ +|.|.|++ ||. .|+++ |+++ +||.
T Consensus 2 C~~~nggC-------~~~C~n~~ggs~~C~C~~----Gy~L~~Dg~t-C~d~--dec~ 45 (53)
T 2bz6_L 2 CVNENGGC-------EQYCSDHTGTKRSCRCHE----GYSLLADGVS-CTPT--VEYP 45 (53)
T ss_dssp TTSGGGGC-------SSEEEEETTTEEEEECCT----TEEECTTSSC-EEEC--SSSC
T ss_pred CcCCCCCc-------CCEeEcCCCCCEEeeCCC----CCEECCCCCc-ccCC--cccc
Confidence 66778889 478999999 79999999 665 67877 9999 8884
No 60
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.23 E-value=0.00021 Score=72.74 Aligned_cols=57 Identities=23% Similarity=0.459 Sum_probs=46.7
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccc-cCCCCCC--CCCCCCCCccCCCCCcc
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCI-LMNAKRG--KPVSALSVAAKTPGEAM 543 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~-didEC~~--~~~C~~~~~~~~~g~~~ 543 (560)
++|.. .+|.+.+. |.+. ++|.|.|++||.|. .|+ |+|||.. ...|.+ .|.|++|++.
T Consensus 6 ~~C~~--~pC~~~g~-------C~~~~~~~~C~C~~g~~g~---~C~~~~~eC~~~~~~~C~~-~C~~~~g~~~ 66 (317)
T 3h5c_B 6 SPCIS--QPCLHNGS-------CQDSIWGYTCTCSPGYEGS---NCELAKNECHPERTDGCQH-FCLPGQESYT 66 (317)
T ss_dssp CCTTS--CCCTTTCC-------CCCCSSSCCCCCSSSCCSS---SSCCCSSSCCTTCTTSCSS-EEECCSSSCE
T ss_pred CcCCC--CCCCCCCE-------eECCCCCeEEECCCCCcCC---ccccCcccCCCCCCCCCcC-ccccCCCeeE
Confidence 88875 46877654 9999 99999999999966 398 9999987 357887 7899998864
No 61
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=97.22 E-value=0.00054 Score=57.62 Aligned_cols=66 Identities=30% Similarity=0.539 Sum_probs=55.8
Q ss_pred CCccccee-cCCceEEEccCCCCceeecCCccceeeeCCCC-ccCCCCCCCCCCcCCCcccccccC--CCceeeCCCCcc
Q 008587 436 ANVTACKD-TFRGRVCECPLVDGVQFKGDGYSHCEVSGPGK-CKINNGGCWHESKDGHTYSACLDS--ENGKCQCPPGFK 511 (560)
Q Consensus 436 ~~~~~C~n-t~gsy~C~C~~~~g~g~~gdg~~~C~di~~~e-C~~~~~~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~ 511 (560)
+.++.|.. .+|...|.|.. ||.++|.. |..+ +. |..++++|...+. |..+ ..-.|.|.++|.
T Consensus 19 p~NA~C~r~~~G~e~CrCl~----gY~~dg~~-Cv~~--Np~C~~nNGGCd~nAe-------C~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 19 PENAACYRYLDGTEEWRCLL----GFKEVGGK-CVPA--SITCEENNGGCAPEAE-------CTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CTTEEEEECTTSCEEEEECT----TEEECSSS-EEEC--CCCTTSGGGGSCTTSE-------EEECTTSCEEEECCSTTC
T ss_pred CCCCCeEECCCCCEeEEEEC----CeeccCCE-EEEC--CcchhhcCCCcCCCcE-------eEECCCCEEEeECCCCCC
Confidence 34688887 67899999999 99999988 9988 88 9999999999986 9888 578899999975
Q ss_pred ---cCCC
Q 008587 512 ---GDGV 515 (560)
Q Consensus 512 ---~dg~ 515 (560)
.+|.
T Consensus 85 ~~~~~Gv 91 (105)
T 1n1i_A 85 EPLFEGV 91 (105)
T ss_dssp CEEGGGT
T ss_pred ccccceE
Confidence 4563
No 62
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.19 E-value=0.00023 Score=56.37 Aligned_cols=37 Identities=22% Similarity=0.442 Sum_probs=28.4
Q ss_pred CCCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeec
Q 008587 418 VETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKG 462 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~g 462 (560)
.|+|||..+.+.|+ +.+.|+|+.|+|.|.|... ||.+
T Consensus 1 ~DidEC~~~~~~C~-----~~~~C~Nt~Gsy~C~~~~~---g~~~ 37 (71)
T 2kl7_A 1 SDVNECLTIPEACK-----GEMKCINHYGGYLCLPRSA---AVIN 37 (71)
T ss_dssp CCSCCTTCCCCSCT-----TEEEEEETTCCEEEEETTS---CCCS
T ss_pred CccccccCCCCCCC-----CCCEeECCCCCeEecccCC---cccc
Confidence 37999998878884 3578999999999985431 5654
No 63
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.17 E-value=0.00036 Score=53.17 Aligned_cols=37 Identities=32% Similarity=0.731 Sum_probs=31.0
Q ss_pred cCCCCCCcCCCCCCCcccceecC-CceEEEccCCCCceee--cCCccceeee
Q 008587 423 CLDNNGGCWQDKTANVTACKDTF-RGRVCECPLVDGVQFK--GDGYSHCEVS 471 (560)
Q Consensus 423 C~~~~~~C~~~~~~~~~~C~nt~-gsy~C~C~~~~g~g~~--gdg~~~C~di 471 (560)
|..++++| .+.|+|++ |+|.|.|++ ||. .|+++ |.++
T Consensus 2 C~~~nggC-------~~~C~n~~~gs~~C~C~~----Gy~L~~D~~t-C~d~ 41 (59)
T 2wph_E 2 CNIKNGRC-------EQFCKNSADNKVVCSCTE----GYRLAENQKS-CEPA 41 (59)
T ss_dssp TTTGGGGC-------SSEEEECSTTCEEEECCT----TEEECTTSSC-EEES
T ss_pred CcCCCCCc-------CCEeEeCCCCCEEeeCCC----CcEECCCCCc-ccCC
Confidence 66778889 47899999 699999999 665 67777 9988
No 64
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=97.17 E-value=5e-05 Score=63.17 Aligned_cols=62 Identities=11% Similarity=0.072 Sum_probs=46.0
Q ss_pred ceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccc--cCCC
Q 008587 447 GRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCI--LMNA 523 (560)
Q Consensus 447 sy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~--didE 523 (560)
+|.|.|++ ||.+.. | ++ ++|... .|.|. ++|.|.|++||. .|+ ++|+
T Consensus 1 sy~C~C~~----g~~g~~---c-~~--~~c~~~---------------pC~n~~~~y~C~C~~G~~-----~C~~~~~~~ 50 (91)
T 1tpg_A 1 SYQVICRD----EKTQMI---Y-QQ--HQSWLR---------------PVLRSNRVEYCWCNSGRA-----QCHSVPVKS 50 (91)
T ss_dssp CCCCCCBC----SSSCCB---C-CS--SCEEEE---------------ECSSSSCEEEEECSSSCC-----BCCEECEEE
T ss_pred CeeeECCC----CCcCCe---E-CC--CcccCC---------------ccccCCCCcEeECCCCCc-----ccccCcCCc
Confidence 68999999 887743 6 45 666432 17777 899999999997 385 8999
Q ss_pred CCCCCCCCC-CCccCCC
Q 008587 524 KRGKPVSAL-SVAAKTP 539 (560)
Q Consensus 524 C~~~~~C~~-~~~~~~~ 539 (560)
|..+ +|.+ +.|.+.+
T Consensus 51 C~~~-pC~ngg~C~~~~ 66 (91)
T 1tpg_A 51 CSEP-RCFNGGTCQQAL 66 (91)
T ss_dssp CSSC-CSCTTCEEEEES
T ss_pred ccCC-CCCCCCEeecCC
Confidence 9875 5765 5566665
No 65
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.10 E-value=0.00016 Score=62.64 Aligned_cols=62 Identities=16% Similarity=0.268 Sum_probs=41.7
Q ss_pred eeeeCCCCccCCC------CCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCcccccC---CCCCCC-CCCCCCCcc
Q 008587 468 CEVSGPGKCKINN------GGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCILM---NAKRGK-PVSALSVAA 536 (560)
Q Consensus 468 C~di~~~eC~~~~------~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~di---dEC~~~-~~C~~~~~~ 536 (560)
+.|+ ++|..++ +.|..++ .|+++ ++|.|.|++||+|+. |+++ +||... ..|.+ .|.
T Consensus 3 ~~d~--d~C~~~p~~~~C~~~C~~~g-------~C~~~~~~y~C~C~~G~~G~~---C~~~~~~~~C~~~~~~C~~-~C~ 69 (114)
T 1aut_L 3 HVDG--DQCLVLPLEHPCASLCCGHG-------TCIDGIGSFSCDCRSGWEGRF---CQREVSFLNCSLDNGGCTH-YCL 69 (114)
T ss_dssp -------CCCCCSSCCSSSSTTTTSE-------EECCCSSCCCEEECTTEESTT---SCEECCSSSSSSGGGGCSS-EEE
T ss_pred ceec--ccccCCCccccccccCCCcC-------CCCCCCCCcEeeCCCCCcCCC---cCcCCcCCcCcCCCCCCCC-EeE
Confidence 5677 8888655 2255443 39999 999999999999874 8764 479753 44665 688
Q ss_pred CCCCCc
Q 008587 537 KTPGEA 542 (560)
Q Consensus 537 ~~~g~~ 542 (560)
|++|++
T Consensus 70 n~~g~y 75 (114)
T 1aut_L 70 EEVGWR 75 (114)
T ss_dssp ECSSSE
T ss_pred CCCCCE
Confidence 888875
No 66
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.09 E-value=0.00036 Score=53.21 Aligned_cols=39 Identities=33% Similarity=0.743 Sum_probs=31.3
Q ss_pred ccCCCCCCCCCCcCCCcccccccC-C-CceeeCCCCcc--cCCCcccccCCCC
Q 008587 476 CKINNGGCWHESKDGHTYSACLDS-E-NGKCQCPPGFK--GDGVKSCILMNAK 524 (560)
Q Consensus 476 C~~~~~~C~~~~~~~~~~~~C~n~-g-s~~C~C~~Gf~--~dg~~sC~didEC 524 (560)
|...+++|.+. |.|+ + +|.|.|++||. .|+ ++|.|+++-
T Consensus 2 C~~~nggC~~~---------C~n~~~gs~~C~C~~Gy~L~~D~-~tC~d~~~~ 44 (59)
T 2wph_E 2 CNIKNGRCEQF---------CKNSADNKVVCSCTEGYRLAENQ-KSCEPAVPF 44 (59)
T ss_dssp TTTGGGGCSSE---------EEECSTTCEEEECCTTEEECTTS-SCEEESSSS
T ss_pred CcCCCCCcCCE---------eEeCCCCCEEeeCCCCcEECCCC-CcccCCCCC
Confidence 55567788765 9998 5 99999999997 566 679998763
No 67
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.01 E-value=0.00025 Score=56.14 Aligned_cols=36 Identities=19% Similarity=0.297 Sum_probs=27.8
Q ss_pred eeCCCCccCCCCCCCCCCcCCCcccccccC-CCceee-CCCCcccCC
Q 008587 470 VSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQ-CPPGFKGDG 514 (560)
Q Consensus 470 di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~-C~~Gf~~dg 514 (560)
|+ +||....+.|+..+. |+|+ ++|.|. |..||.++.
T Consensus 2 Di--dEC~~~~~~C~~~~~-------C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 2 DV--NECLTIPEACKGEMK-------CINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp CS--CCTTCCCCSCTTEEE-------EEETTCCEEEEETTSCCCSCC
T ss_pred cc--ccccCCCCCCCCCCE-------eECCCCCeEecccCCcccccc
Confidence 56 999987788986644 9999 999997 556776443
No 68
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.99 E-value=6.9e-05 Score=71.31 Aligned_cols=60 Identities=20% Similarity=0.444 Sum_probs=14.9
Q ss_pred eeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCccccc-C-CCCCCC-CCCCCCCccCCCCCc
Q 008587 468 CEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCIL-M-NAKRGK-PVSALSVAAKTPGEA 542 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~d-i-dEC~~~-~~C~~~~~~~~~g~~ 542 (560)
|.++ ++|.. ++|.+.+. |+++ ++|.|.|++||.|. .|++ | |||... ..|.+ .|.|++|++
T Consensus 39 c~di--deC~~--~pC~ngg~-------C~n~~g~y~C~C~~Gf~G~---~Ce~~i~deC~~~~~~C~~-~C~n~~gsy 102 (195)
T 1nfu_B 39 YKDG--DQCET--SPCQNQGK-------CKDGLGEYTCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ-FCHEEQNSV 102 (195)
T ss_dssp --------------------------------------------------------CCGGGTGGGGCSS-EEEEETTEE
T ss_pred CCCC--cccCC--CCCCCCCE-------eECCCCCeeEeCCCCceec---cccccccccccCCCCCCCC-EeECCCCCe
Confidence 8888 99984 57987654 9999 99999999999965 3986 6 999864 45776 788888764
No 69
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.95 E-value=0.00089 Score=55.97 Aligned_cols=68 Identities=28% Similarity=0.630 Sum_probs=54.6
Q ss_pred CCccccee-cCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccCC------CceeeCCC
Q 008587 436 ANVTACKD-TFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSE------NGKCQCPP 508 (560)
Q Consensus 436 ~~~~~C~n-t~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~g------s~~C~C~~ 508 (560)
..++.|.+ ..+.+.|.|.+ ||.+|+.. |..+....|..++++|...+. |...+ ...|.|.+
T Consensus 13 ~~NA~C~r~~~g~e~C~C~~----gy~gdg~~-Cv~~~~~sC~~nNGGCd~nA~-------C~~~~~~~~~~ki~C~C~~ 80 (99)
T 1ob1_C 13 PQNSGCFRHLDEREECKCLL----NYKQEGDK-CVENPNPTCNENNGGCDADAK-------CTEEDSGSNGKKITCECTK 80 (99)
T ss_dssp CTTEEEECCTTSCCEEEECT----TEEEETTE-EEECSCCCSTTGGGGCCTTEE-------EECCSCSSSSCCCEEEECS
T ss_pred CCCCCeEEcCCCCEEEEecC----CeecCCCe-EeeCCCCChhhcCCCcCCCce-------eEecCCcccCCceEeEeCC
Confidence 45678877 47899999999 99999988 987633589999999999876 87662 48899999
Q ss_pred Ccc---cCCC
Q 008587 509 GFK---GDGV 515 (560)
Q Consensus 509 Gf~---~dg~ 515 (560)
||. .+|.
T Consensus 81 g~~~~~~~gv 90 (99)
T 1ob1_C 81 PDSYPLFDGI 90 (99)
T ss_dssp TTCCEEGGGT
T ss_pred CCcccceeEE
Confidence 986 5553
No 70
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.90 E-value=0.00032 Score=51.80 Aligned_cols=39 Identities=28% Similarity=0.612 Sum_probs=29.5
Q ss_pred eeCCCCccCC--------CCCCCCCCcCCCcccccccC-CCceeeCCCCccc--CCCccccc
Q 008587 470 VSGPGKCKIN--------NGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKG--DGVKSCIL 520 (560)
Q Consensus 470 di~~~eC~~~--------~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~--dg~~sC~d 520 (560)
|+ +||... ++.|.+. |.|+ |+|.|.|++||++ ++ ++|.+
T Consensus 3 Di--dEC~~~~~~~~~~~~~~C~~~---------C~n~~Gsy~C~C~~Gy~~~~d~-~~C~~ 52 (53)
T 1apq_A 3 DL--DECASRSKSGEEDPQPQCQHL---------CHNYVGGYFCSCRPGYELQEDR-HSCQA 52 (53)
T ss_dssp SC--CTTTCSTTTCCCSSSCTTSSE---------EEEETTEEEEECSTTCEECTTS-SCEEC
T ss_pred cc--ccccCcccccccccCCCCCCE---------eECCCCCeEEECCCCCeECCCC-CccCC
Confidence 56 899764 3678643 9999 9999999999984 44 55653
No 71
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.82 E-value=0.00011 Score=65.53 Aligned_cols=60 Identities=20% Similarity=0.444 Sum_probs=14.5
Q ss_pred eeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCccccc-C-CCCCCC-CCCCCCCccCCCCCc
Q 008587 468 CEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCIL-M-NAKRGK-PVSALSVAAKTPGEA 542 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~d-i-dEC~~~-~~C~~~~~~~~~g~~ 542 (560)
|.++ ++|.. .+|.+.+. |+++ ++|.|.|++||.|. .|++ | |+|... ..|.+ .|.|++|++
T Consensus 39 c~d~--d~C~~--~pC~n~g~-------C~~~~~~y~C~C~~G~~G~---~C~~~i~d~C~~~~~~C~~-~C~~~~g~y 102 (134)
T 2vh0_B 39 YKDG--DQCET--SPCQNQGK-------CKDGLGEYTCTCLEGFEGK---NCELFTRKLCSLDNGDCDQ-FCHEEQNSV 102 (134)
T ss_dssp --------------------------------------------------------CCGGGTGGGGCSS-EEEEETTEE
T ss_pred CCCc--CcCCC--CCCCCcCC-------cccCCCCEEeeCCCCccCC---ccccCCCCccccCCCCCCC-EeECCCCCE
Confidence 8888 99984 46887654 9999 99999999999965 3987 7 999864 45766 678888764
No 72
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=96.78 E-value=2.8e-05 Score=77.15 Aligned_cols=73 Identities=12% Similarity=0.003 Sum_probs=50.0
Q ss_pred CCcccceecCCceEEEccCCCCceeecCCcccee-eeCCCC------ccCC---------------------CCCCCCCC
Q 008587 436 ANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGK------CKIN---------------------NGGCWHES 487 (560)
Q Consensus 436 ~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~e------C~~~---------------------~~~C~~~~ 487 (560)
.+...|++..++|.|.||+ ||++.. |+ ++ ++ |... ..+|....
T Consensus 41 ~ngG~C~~g~~~y~C~Cp~----Gf~G~~---Ce~ni--~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG 111 (267)
T 4fbr_A 41 DDGGKTLKGTMTYNGEGPI----GFRGTL---SSANN--YTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGG 111 (267)
T ss_dssp SSTTSEEEEEEEETTSCCE----EEEEEE---CSTTE--EEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTT
T ss_pred CCCCeecCCCCCeEEeCCC----Cccccc---ccccc--cccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCC
Confidence 4678999999999999999 898753 42 22 33 2110 12233332
Q ss_pred cCCCcccccccC-CCceeeCCCCcccCCCcccc-cCCCCCCC
Q 008587 488 KDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCI-LMNAKRGK 527 (560)
Q Consensus 488 ~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~-didEC~~~ 527 (560)
+|++. .+|+|.|++||+|.. |+ ++|+|...
T Consensus 112 -------~C~~~~~sy~C~C~~Gf~G~~---Ce~~~d~C~n~ 143 (267)
T 4fbr_A 112 -------KTLTGTTTYNGEGPIGFKSEV---TDGDTYSVENQ 143 (267)
T ss_dssp -------SEEEEEEEETTSCCEEEEEEE---CCCCEEEEEEE
T ss_pred -------EEecCCccEEeeCCCCccccC---CCCCccccccc
Confidence 38888 899999999999863 64 67886543
No 73
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=96.61 E-value=2.8e-05 Score=77.23 Aligned_cols=81 Identities=16% Similarity=0.108 Sum_probs=52.7
Q ss_pred CCCCCCcccceecCCceEEEccCCCCceeecCCcccee-eeCCCCccCC----CCCCCCC-------------------C
Q 008587 432 QDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKIN----NGGCWHE-------------------S 487 (560)
Q Consensus 432 ~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~eC~~~----~~~C~~~-------------------~ 487 (560)
..++.+..+|++...+|.|+||. ||+|.. |+ ++ ++|... ..+|... .
T Consensus 104 s~pC~ngG~C~~~~~sy~C~C~~----Gf~G~~---Ce~~~--d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c 174 (267)
T 4fbr_A 104 SIKSNDGGKTLTGTTTYNGEGPI----GFKSEV---TDGDT--YSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKS 174 (267)
T ss_dssp EEECSSTTSEEEEEEEETTSCCE----EEEEEE---CCCCE--EEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEEC
T ss_pred CCCCCCCCEEecCCccEEeeCCC----CccccC---CCCCc--ccccccCCcCCccccCCcceecccccccccccCCCCC
Confidence 34556789999999999999999 999753 43 23 343211 1122211 0
Q ss_pred cCCCcccccccC-CCceeeCCCCcccCCCccc-ccCCCCCCC
Q 008587 488 KDGHTYSACLDS-ENGKCQCPPGFKGDGVKSC-ILMNAKRGK 527 (560)
Q Consensus 488 ~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC-~didEC~~~ 527 (560)
.+|. .|++. .+|.|.||+||+|. . | .+|+||...
T Consensus 175 ~ngg---~C~dg~~~y~C~Cp~Gf~G~--~-c~~~i~ec~~~ 210 (267)
T 4fbr_A 175 NDGG---KTLSGTMTYNGEGPIGFRGT--L-TSPDTYTVENQ 210 (267)
T ss_dssp SSTT---SEEEEEEEETTSCCEEEEEE--E-EETTEEEEEEE
T ss_pred CCCC---EeeCCCCCeEEeCCCCcccc--c-cccccceeccC
Confidence 1122 38888 89999999999976 3 5 477776543
No 74
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.50 E-value=0.0016 Score=44.81 Aligned_cols=35 Identities=31% Similarity=0.807 Sum_probs=27.9
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCC
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDG 464 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg 464 (560)
|+|||.. ..| .+.+.|+++.++|.|.|++ ||.|..
T Consensus 2 d~d~C~~--~pC-----~ngg~C~~~~~~~~C~C~~----G~~G~~ 36 (39)
T 1edm_B 2 DGDQCES--NPC-----LNGGSCKDDINSYECWCPF----GFEGKN 36 (39)
T ss_dssp CCCTTTT--CCC-----CTTCEEEEETTEEEEECCT----TCCSTT
T ss_pred ccccCCC--CCC-----CCCCEeEcCCCceEeECCC----CCcCCc
Confidence 6788863 345 4678999999999999999 888753
No 75
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.39 E-value=0.00038 Score=53.43 Aligned_cols=45 Identities=18% Similarity=0.345 Sum_probs=34.7
Q ss_pred eeeeCCCCccCCCCCCCCC--CcCCCcccccccC-CCceeeCCCCcc-cCCCcccccCCCCCC
Q 008587 468 CEVSGPGKCKINNGGCWHE--SKDGHTYSACLDS-ENGKCQCPPGFK-GDGVKSCILMNAKRG 526 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~--~~~~~~~~~C~n~-gs~~C~C~~Gf~-~dg~~sC~didEC~~ 526 (560)
|+++ ++|.. .+|.+. +. |+++ ++|.|.|++||. |.. |++.++|..
T Consensus 8 ~~~~--d~C~s--nPC~nga~gt-------C~~~~g~y~C~C~~Gy~~G~~---C~~~~~C~~ 56 (61)
T 2k2s_B 8 SETP--AACSS--NPCGPEAAGT-------CKETNSGYICRCNQGYRISLD---GTGNVTCIV 56 (61)
T ss_dssp TTSC--CHHHH--CSSCSSSCCE-------EEECSSEEEEECCTTEEEEEC---SSSCEEEEE
T ss_pred cCCC--CcCcC--CCCcCCCccc-------cccCCCceEeECCCCCccCCC---CCCCCEecc
Confidence 5566 88974 468876 33 9999 999999999998 763 877777753
No 76
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=96.38 E-value=0.003 Score=63.10 Aligned_cols=65 Identities=22% Similarity=0.483 Sum_probs=43.2
Q ss_pred CCccCC-CCCCCCCCcCCCcccccccC-CCceeeCCCCcc-cCCCcccccCCCCCCCCCCCCCCccCCCCCccceeee
Q 008587 474 GKCKIN-NGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK-GDGVKSCILMNAKRGKPVSALSVAAKTPGEAMNALVV 548 (560)
Q Consensus 474 ~eC~~~-~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~-~dg~~sC~didEC~~~~~C~~~~~~~~~g~~~~~~~~ 548 (560)
|||... +++|.+. |.++ ++|.|.|++||+ +...++|.+.+||.-...-.. -..-.+|+++-.+..
T Consensus 3 ~eC~~~~~~~C~~~---------C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~CG~~~~~-g~~a~~~~~Pw~v~l 70 (283)
T 3f1s_B 3 NECHPERTDGCQHF---------CLPGQESYTCSCAQGYRLGEDHKQCVPHDQCACGVLTSE-KRAPDLQDLPWQVKL 70 (283)
T ss_dssp CCCCSSCSSSCSSB---------CCCCTTSCCCBCCTTEEECTTSSCEEECSTTCTTCCCC---------CCTTEEEE
T ss_pred CccCCCCCCCCCCE---------eeCCCCCeEecCCCCcccCCCCCccccccccccCccccC-CccccccccCCEEEE
Confidence 899988 8999876 9999 999999999998 333378999999863211111 122356777765544
No 77
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=96.22 E-value=0.0016 Score=60.22 Aligned_cols=56 Identities=23% Similarity=0.720 Sum_probs=44.8
Q ss_pred ccceecCCceEEEccCCCCceeecCCcccee-eeCCCCccCCCCCCCCCCcCCCcccccccC--CCceeeCCCCcccCC
Q 008587 439 TACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKINNGGCWHESKDGHTYSACLDS--ENGKCQCPPGFKGDG 514 (560)
Q Consensus 439 ~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~eC~~~~~~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~~dg 514 (560)
..|+ ++|.|.|++ ||.|+. |+ ++ ++|.. ...|.+.+. |+++ ++|.|.|++||+|+.
T Consensus 108 g~C~---~~~~C~C~~----G~~G~~---C~~~~--~~C~~-~~~C~~~g~-------C~~~~~~~~~C~C~~G~~G~~ 166 (169)
T 2vj2_A 108 GICN---EPWQCLCET----NWGGQL---CDKDL--NYCGT-HQPCLNGGT-------CSNTGPDKYQCSCPEGYSGPN 166 (169)
T ss_dssp EECS---STTCCEECT----TEETTT---TCEES--CHHHH-TCCCCTTCE-------EEECSTTCEEEECCTTCCSTT
T ss_pred CCcC---CCCEEeCCC----CCCCCc---ccCCC--CCCCC-CCCCCCCCE-------EcCCCCCCcEeECCCCCcCcC
Confidence 3675 579999999 999754 87 88 99975 357887654 9985 889999999999763
No 78
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.18 E-value=0.0012 Score=59.36 Aligned_cols=60 Identities=18% Similarity=0.413 Sum_probs=44.4
Q ss_pred eeeeCCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccCCCccccc-CCCCCC----CCCCCCCCccCCCC-
Q 008587 468 CEVSGPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGDGVKSCIL-MNAKRG----KPVSALSVAAKTPG- 540 (560)
Q Consensus 468 C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~dg~~sC~d-idEC~~----~~~C~~~~~~~~~g- 540 (560)
|.++ ++|.. .+|.+.+. |+++ ++|.|.|++||+|. .|++ +++|.. +..|.+ .|.|++|
T Consensus 44 c~di--d~C~~--~pC~n~g~-------C~~~~g~y~C~C~~G~~G~---~C~~~~~~c~~c~~~~~~C~~-~C~~~~g~ 108 (142)
T 2c4f_L 44 YSDG--DQCAS--SPCQNGGS-------CKDQLQSYICFCLPAFEGR---NCETHKDDQLICVNENGGCEQ-YCSDHTGT 108 (142)
T ss_dssp HTTC--CGGGG--CCCCTTCE-------EEEETTEEEEECCTTEEST---TSCEEGGGCCSTTTGGGGCSS-EEECCTTS
T ss_pred CCcc--CcCcC--CCcCCCCE-------EeCCCCCEEeeCCCCccCC---ccccCccccccccCCCCCccC-EeECCCCC
Confidence 7788 99984 57987654 9999 99999999999865 3986 777632 223443 5778888
Q ss_pred Cc
Q 008587 541 EA 542 (560)
Q Consensus 541 ~~ 542 (560)
++
T Consensus 109 ~y 110 (142)
T 2c4f_L 109 KR 110 (142)
T ss_dssp CC
T ss_pred CE
Confidence 54
No 79
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.04 E-value=0.0014 Score=50.15 Aligned_cols=45 Identities=22% Similarity=0.516 Sum_probs=32.7
Q ss_pred CCCCcccCCCCCCcCCCCCCCc--ccceecCCceEEEccCCCCceee-cCCccceeeeCCCCcc
Q 008587 417 DVETNECLDNNGGCWQDKTANV--TACKDTFRGRVCECPLVDGVQFK-GDGYSHCEVSGPGKCK 477 (560)
Q Consensus 417 c~didEC~~~~~~C~~~~~~~~--~~C~nt~gsy~C~C~~~~g~g~~-gdg~~~C~di~~~eC~ 477 (560)
+.++|||..+ .| .|. +.|+++.++|.|.|++ ||. |.. |++. ++|.
T Consensus 8 ~~~~d~C~sn--PC-----~nga~gtC~~~~g~y~C~C~~----Gy~~G~~---C~~~--~~C~ 55 (61)
T 2k2s_B 8 SETPAACSSN--PC-----GPEAAGTCKETNSGYICRCNQ----GYRISLD---GTGN--VTCI 55 (61)
T ss_dssp TTSCCHHHHC--SS-----CSSSCCEEEECSSEEEEECCT----TEEEEEC---SSSC--EEEE
T ss_pred cCCCCcCcCC--CC-----cCCCccccccCCCceEeECCC----CCccCCC---CCCC--CEec
Confidence 3467888642 35 455 6899999999999999 998 754 7655 5554
No 80
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=95.93 E-value=0.0015 Score=60.42 Aligned_cols=75 Identities=27% Similarity=0.545 Sum_probs=50.8
Q ss_pred ccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccCCCceeeCCCCcccCCCccc
Q 008587 439 TACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSC 518 (560)
Q Consensus 439 ~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~gs~~C~C~~Gf~~dg~~sC 518 (560)
..|.+ .|.|.|++ ||.|.. |+ +|... ..|.+. .|. +++.|.|++||+|. .|
T Consensus 77 g~C~~---~~~C~C~~----G~~G~~---C~-----~C~~~-~~C~~g--------~C~--~~~~C~C~~G~~G~---~C 127 (169)
T 2vj2_A 77 GSCKL---PGDCRCQY----GWQGLY---CD-----KCIPH-PGCVHG--------ICN--EPWQCLCETNWGGQ---LC 127 (169)
T ss_dssp EECSS---TTCCEECT----TEESSS---SC-----EECCC-TTCSSE--------ECS--STTCCEECTTEETT---TT
T ss_pred cccCC---CCeeECCC----CCCCCC---cc-----cCCCC-CCCCCC--------CcC--CCCEEeCCCCCCCC---cc
Confidence 45655 57999999 998764 63 34322 235432 265 47899999999976 39
Q ss_pred c-cCCCCCCCCCCCC-CCccCC-CCCc
Q 008587 519 I-LMNAKRGKPVSAL-SVAAKT-PGEA 542 (560)
Q Consensus 519 ~-didEC~~~~~C~~-~~~~~~-~g~~ 542 (560)
+ ++|||.....|.+ +.+.++ +|++
T Consensus 128 ~~~~~~C~~~~~C~~~g~C~~~~~~~~ 154 (169)
T 2vj2_A 128 DKDLNYCGTHQPCLNGGTCSNTGPDKY 154 (169)
T ss_dssp CEESCHHHHTCCCCTTCEEEECSTTCE
T ss_pred cCCCCCCCCCCCCCCCCEEcCCCCCCc
Confidence 7 9999986446765 566665 6653
No 81
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.80 E-value=0.0045 Score=42.52 Aligned_cols=31 Identities=32% Similarity=0.917 Sum_probs=25.8
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcccC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFKGD 513 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~~d 513 (560)
++|. ..+|.+.+. |++. ++|.|.|++||+|.
T Consensus 4 d~C~--~~pC~ngg~-------C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 4 DQCE--SNPCLNGGS-------CKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CTTT--TCCCCTTCE-------EEEETTEEEEECCTTCCST
T ss_pred ccCC--CCCCCCCCE-------eEcCCCceEeECCCCCcCC
Confidence 8887 357887654 9999 99999999999876
No 82
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.73 E-value=0.0041 Score=57.29 Aligned_cols=50 Identities=24% Similarity=0.626 Sum_probs=37.7
Q ss_pred eeecCCccceeeeCCCCccCCCCC---CCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCcccccCC
Q 008587 459 QFKGDGYSHCEVSGPGKCKINNGG---CWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCILMN 522 (560)
Q Consensus 459 g~~gdg~~~C~di~~~eC~~~~~~---C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~did 522 (560)
||.+. +. |.++ +||...++. |.+. |.|+ ++|.|.|++||. +++ ++|.+++
T Consensus 114 Gf~~~-~~-~~di--~eC~~~~~~~~~C~~~---------C~n~~g~~~C~C~~Gy~l~~d~-~~C~~~~ 169 (170)
T 1szb_A 114 GFEAF-YA-AEDI--DECQVAPGEAPTCDHH---------CHNHLGGFYCSCRAGYVLHRNK-RTCSEQS 169 (170)
T ss_dssp EEEEE-EE-EEEC--CTTCCCTTSCCSSSSE---------EEEETTEEEEECCTTEEECTTS-SCEEEC-
T ss_pred Cceee-ee-cccc--CcccCCCCCCCccCCc---------cccCCCCEEEeCCCCcEECCCC-Ccccccc
Confidence 67653 33 7888 999876654 8764 9999 999999999998 556 5687753
No 83
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=95.70 E-value=0.0056 Score=45.81 Aligned_cols=39 Identities=28% Similarity=0.537 Sum_probs=28.4
Q ss_pred CCCcccCCCCCCcCCCCCCCcccc-----eecCCceEEEccCCCCceeecCCccceee
Q 008587 418 VETNECLDNNGGCWQDKTANVTAC-----KDTFRGRVCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 418 ~didEC~~~~~~C~~~~~~~~~~C-----~nt~gsy~C~C~~~~g~g~~gdg~~~C~d 470 (560)
+++|||..+ ++.|.++| ++..++|.|.|++ ||.|.. |+.
T Consensus 6 ~~~~eC~s~-------pC~NgGtC~~~~~~d~~~~y~C~C~~----g~~G~~---CE~ 49 (55)
T 3u7u_G 6 VKCAEKEKT-------FCVNGGECFMVKDLSNPSRYLCKCPN----EFTGDR---CQN 49 (55)
T ss_dssp EECCSTTTT-------TSCTTCEEEEECCC--CCCEEEEECT----TEESTT---SCE
T ss_pred ccCCCCcCC-------CCCCCCCcCCCCccCCCCCEeEeCCC----CCcCCC---cCc
Confidence 467888532 34678999 4667899999999 999875 764
No 84
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.70 E-value=0.006 Score=56.16 Aligned_cols=43 Identities=21% Similarity=0.567 Sum_probs=34.3
Q ss_pred CCCCcccCCCCCC---cCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceeee
Q 008587 417 DVETNECLDNNGG---CWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEVS 471 (560)
Q Consensus 417 c~didEC~~~~~~---C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~di 471 (560)
+.+++||...++. |. +.|.|+.|+|.|.|++ ||. +++++ |+++
T Consensus 121 ~~di~eC~~~~~~~~~C~-------~~C~n~~g~~~C~C~~----Gy~l~~d~~~-C~~~ 168 (170)
T 1szb_A 121 AEDIDECQVAPGEAPTCD-------HHCHNHLGGFYCSCRA----GYVLHRNKRT-CSEQ 168 (170)
T ss_dssp EEECCTTCCCTTSCCSSS-------SEEEEETTEEEEECCT----TEEECTTSSC-EEEC
T ss_pred ccccCcccCCCCCCCccC-------CccccCCCCEEEeCCC----CcEECCCCCc-cccc
Confidence 4578999877665 83 5799999999999999 776 66766 8865
No 85
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.34 E-value=0.0077 Score=60.11 Aligned_cols=45 Identities=24% Similarity=0.634 Sum_probs=36.2
Q ss_pred CCcccCCC-CCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceeeeCCCCcc
Q 008587 419 ETNECLDN-NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEVSGPGKCK 477 (560)
Q Consensus 419 didEC~~~-~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~di~~~eC~ 477 (560)
|.|||..+ +++| .+.|.|+.++|.|.|+. ||. .++++ |.+. ++|.
T Consensus 1 ~~~eC~~~~~~~C-------~~~C~~~~~~~~C~C~~----G~~l~~d~~s-C~p~--~~c~ 48 (283)
T 3f1s_B 1 AKNECHPERTDGC-------QHFCLPGQESYTCSCAQ----GYRLGEDHKQ-CVPH--DQCA 48 (283)
T ss_dssp --CCCCSSCSSSC-------SSBCCCCTTSCCCBCCT----TEEECTTSSC-EEEC--STTC
T ss_pred CCCccCCCCCCCC-------CCEeeCCCCCeEecCCC----CcccCCCCCc-cccc--cccc
Confidence 46899988 8999 58999999999999999 665 46666 9988 6664
No 86
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.24 E-value=0.0093 Score=44.08 Aligned_cols=40 Identities=25% Similarity=0.742 Sum_probs=30.0
Q ss_pred CCcccCCC-CCCcCCCCCCCcccce--ecCCceEEEccCCCCceeecCCccceee
Q 008587 419 ETNECLDN-NGGCWQDKTANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 419 didEC~~~-~~~C~~~~~~~~~~C~--nt~gsy~C~C~~~~g~g~~gdg~~~C~d 470 (560)
+++||..+ ...| .|.+.|+ +..++|.|.|++ ||.|.. |+.
T Consensus 2 ~i~~C~~~~~~pC-----~ngg~C~~~~~~~~~~C~C~~----G~~G~~---Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYC-----LNGGVCMHIESLDSYTCNCVI----GYSGDR---CQT 44 (53)
T ss_dssp EECCCCTTSSCSS-----CSSCEEEEESSSSCEEEECCT----TCCSSS---SCC
T ss_pred CcccCCCCCCCcC-----CCCcEEEeeCCCCCEEEECCC----CCcCCc---CCc
Confidence 57888653 2345 4678999 788999999999 898754 764
No 87
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.02 E-value=0.007 Score=54.99 Aligned_cols=28 Identities=36% Similarity=0.878 Sum_probs=23.3
Q ss_pred cccC-CCceeeCCCCcccCCCcccccCCCCCC
Q 008587 496 CLDS-ENGKCQCPPGFKGDGVKSCILMNAKRG 526 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~dg~~sC~didEC~~ 526 (560)
|.+. ++|.|.|++||.|+. |++++||..
T Consensus 133 C~~~~~~~~c~C~~g~~G~~---Ce~~~~c~~ 161 (162)
T 1g1s_A 133 CLETIGNYTCSCYPGFYGPE---CEYVRDDDD 161 (162)
T ss_dssp EEECSSSEEEEECTTEESTT---SCEECC---
T ss_pred EecCCCCceEeCCCCCcCcc---cccCcccCC
Confidence 9999 999999999999873 999999975
No 88
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=94.93 E-value=0.022 Score=40.51 Aligned_cols=33 Identities=27% Similarity=0.626 Sum_probs=23.9
Q ss_pred CCCCCCCcCCCcccccc--cC-CCceeeCCCCcccCCCcccc-cCCC
Q 008587 481 GGCWHESKDGHTYSACL--DS-ENGKCQCPPGFKGDGVKSCI-LMNA 523 (560)
Q Consensus 481 ~~C~~~~~~~~~~~~C~--n~-gs~~C~C~~Gf~~dg~~sC~-didE 523 (560)
.+|.+.+. |. +. ++|.|.|++||+|.. |+ +++|
T Consensus 9 ~pC~ngg~-------C~~~~~~~~~~C~C~~G~~G~~---Ce~~~~e 45 (45)
T 1a3p_A 9 GYCLNGGV-------XMHIESLDSYTCNCVIGYSGDR---CQTRDLR 45 (45)
T ss_dssp SCCSSSCE-------EEECTTTSSEEEECCTTEETTT---TCEECCC
T ss_pred CCCCCCCE-------EEeecCCCCEEEEcCCCCcCCc---CCcccCC
Confidence 36776543 87 66 899999999999763 74 4543
No 89
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=94.91 E-value=0.025 Score=41.70 Aligned_cols=33 Identities=30% Similarity=0.841 Sum_probs=26.0
Q ss_pred CCccCC-CCCCCCCCcCCCcccccc--cC-CCceeeCCCCcccC
Q 008587 474 GKCKIN-NGGCWHESKDGHTYSACL--DS-ENGKCQCPPGFKGD 513 (560)
Q Consensus 474 ~eC~~~-~~~C~~~~~~~~~~~~C~--n~-gs~~C~C~~Gf~~d 513 (560)
++|... ..+|.+.+. |+ +. ++|.|.|++||+|.
T Consensus 4 ~~C~~~~~~pC~ngg~-------C~~~~~~~~~~C~C~~G~~G~ 40 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGV-------CMHIESLDSYTCNCVIGYSGD 40 (53)
T ss_dssp CCCCTTSSCSSCSSCE-------EEEESSSSCEEEECCTTCCSS
T ss_pred ccCCCCCCCcCCCCcE-------EEeeCCCCCEEEECCCCCcCC
Confidence 888753 347887654 98 77 99999999999876
No 90
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=94.84 E-value=0.013 Score=44.92 Aligned_cols=42 Identities=24% Similarity=0.565 Sum_probs=31.5
Q ss_pred CCccCCCCCCCCCCcCCCccccccc-----C-CCceeeCCCCcccCCCcccc-cCCCCCCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLD-----S-ENGKCQCPPGFKGDGVKSCI-LMNAKRGK 527 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n-----~-gs~~C~C~~Gf~~dg~~sC~-didEC~~~ 527 (560)
++|. ..+|.+.+. |++ . ++|.|.|++||+|.. |+ +||+|.-+
T Consensus 7 ~~C~--~~pC~ngG~-------C~~~~~~~~~~~y~C~C~~Gf~G~~---Ce~~i~~~~~~ 55 (63)
T 1hae_A 7 AEKE--KTFCVNGGE-------CFMVKDLSNPSRYLCKCQPGFTGAR---CTENVPMKVQN 55 (63)
T ss_dssp CHHH--HTTSCTTCE-------EEEEESSSSSCCEEEECCTTEESTT---SCEECCSSCTT
T ss_pred CCCC--CCcCCCCcE-------EecCCccCCCCCEEEECCCCCcCCc---cCcCcCccccc
Confidence 5665 346776543 885 5 899999999999763 85 89998754
No 91
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.57 E-value=0.013 Score=60.06 Aligned_cols=39 Identities=28% Similarity=0.640 Sum_probs=23.4
Q ss_pred CcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceeee
Q 008587 420 TNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEVS 471 (560)
Q Consensus 420 idEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~di 471 (560)
+|||. .+++| .+.|.|+.|+|.|.|++ ||. .++++ |...
T Consensus 1 i~ec~-~~~~C-------~~~C~n~~g~~~C~C~~----g~~l~~d~~~-C~~~ 41 (349)
T 3v64_C 1 VNECA-EEGYC-------SQGCTNSEGAFQCWCEA----GYELRPDRRS-CKAL 41 (349)
T ss_dssp ---------CC-------SSEECCC---CCEECCT----TEEECTTSSC-EEES
T ss_pred CcccC-CCCCC-------cCeeecCCCCeEEECCC----CccCCCCCCc-cccc
Confidence 58997 78899 48999999999999999 665 56666 9876
No 92
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=94.31 E-value=0.03 Score=41.77 Aligned_cols=35 Identities=26% Similarity=0.555 Sum_probs=26.3
Q ss_pred eeeCCCCccCCCCCCCCCCcCCCccccc-----ccC-CCceeeCCCCcccCC
Q 008587 469 EVSGPGKCKINNGGCWHESKDGHTYSAC-----LDS-ENGKCQCPPGFKGDG 514 (560)
Q Consensus 469 ~di~~~eC~~~~~~C~~~~~~~~~~~~C-----~n~-gs~~C~C~~Gf~~dg 514 (560)
.++ +||.. .+|.+.+. | ++. ++|.|.|++||.|.-
T Consensus 6 ~~~--~eC~s--~pC~NgGt-------C~~~~~~d~~~~y~C~C~~g~~G~~ 46 (55)
T 3u7u_G 6 VKC--AEKEK--TFCVNGGE-------CFMVKDLSNPSRYLCKCPNEFTGDR 46 (55)
T ss_dssp EEC--CSTTT--TTSCTTCE-------EEEECCC--CCCEEEEECTTEESTT
T ss_pred ccC--CCCcC--CCCCCCCC-------cCCCCccCCCCCEeEeCCCCCcCCC
Confidence 366 99984 57987754 9 466 899999999999873
No 93
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.15 E-value=0.016 Score=59.40 Aligned_cols=39 Identities=28% Similarity=0.745 Sum_probs=25.4
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCcccccCCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCILMNA 523 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~didE 523 (560)
+||. .+++|.+. |.|+ ++|.|.|++||. .|+ ++|..+++
T Consensus 2 ~ec~-~~~~C~~~---------C~n~~g~~~C~C~~g~~l~~d~-~~C~~~~~ 43 (349)
T 3v64_C 2 NECA-EEGYCSQG---------CTNSEGAFQCWCEAGYELRPDR-RSCKALGP 43 (349)
T ss_dssp --------CCSSE---------ECCC---CCEECCTTEEECTTS-SCEEESSS
T ss_pred cccC-CCCCCcCe---------eecCCCCeEEECCCCccCCCCC-Cccccccc
Confidence 7898 67889876 9999 999999999998 455 67988766
No 94
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=94.06 E-value=0.028 Score=42.92 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=26.9
Q ss_pred CCCccccee-----cCCceEEEccCCCCceeecCCcccee-eeCCCCccC
Q 008587 435 TANVTACKD-----TFRGRVCECPLVDGVQFKGDGYSHCE-VSGPGKCKI 478 (560)
Q Consensus 435 ~~~~~~C~n-----t~gsy~C~C~~~~g~g~~gdg~~~C~-di~~~eC~~ 478 (560)
+.|.+.|++ +.++|.|.|++ ||.|.. |+ ++ ++|..
T Consensus 14 C~ngG~C~~~~~~~~~~~y~C~C~~----Gf~G~~---Ce~~i--~~~~~ 54 (63)
T 1hae_A 14 CVNGGECFMVKDLSNPSRYLCKCQP----GFTGAR---CTENV--PMKVQ 54 (63)
T ss_dssp SCTTCEEEEEESSSSSCCEEEECCT----TEESTT---SCEEC--CSSCT
T ss_pred CCCCcEEecCCccCCCCCEEEECCC----CCcCCc---cCcCc--Ccccc
Confidence 356788986 67899999999 998764 86 66 66653
No 95
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.92 E-value=0.029 Score=50.84 Aligned_cols=33 Identities=24% Similarity=0.497 Sum_probs=27.3
Q ss_pred CCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCcc
Q 008587 436 ANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 477 (560)
Q Consensus 436 ~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~ 477 (560)
.+.+.|.++.++|.|.|++ ||.|+. |+.+ ++|.
T Consensus 128 ~~~g~C~~~~~~~~c~C~~----g~~G~~---Ce~~--~~c~ 160 (162)
T 1g1s_A 128 SKQGECLETIGNYTCSCYP----GFYGPE---CEYV--RDDD 160 (162)
T ss_dssp GGSEEEEECSSSEEEEECT----TEESTT---SCEE--CC--
T ss_pred CCCCEEecCCCCceEeCCC----CCcCcc---cccC--cccC
Confidence 3568899999999999999 999864 9999 8886
No 96
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=93.52 E-value=0.045 Score=39.18 Aligned_cols=38 Identities=26% Similarity=0.703 Sum_probs=27.2
Q ss_pred CCcccCCC-CCCcCCCCCCCcccceecC--CceEEEccCCCCceeecCCcccee
Q 008587 419 ETNECLDN-NGGCWQDKTANVTACKDTF--RGRVCECPLVDGVQFKGDGYSHCE 469 (560)
Q Consensus 419 didEC~~~-~~~C~~~~~~~~~~C~nt~--gsy~C~C~~~~g~g~~gdg~~~C~ 469 (560)
++++|... ...| .| +.|.+.. ++|.|.|++ ||.|.. |+
T Consensus 2 ~i~~C~~~~~~pC-----~n-G~C~~~~~~~~~~C~C~~----GytG~~---Ce 42 (46)
T 1k36_A 2 SITKCSSDMNGYC-----LH-GQCIYLVDMSQNYCRCEV----GYTGVR---CE 42 (46)
T ss_dssp CEECCCTTCCSSC-----SS-EEEEEETTTTEEEEEECT----TCSSTT---SC
T ss_pred ccccCCCCCCCCC-----CC-CEeeccCCCCCEEEECCC----CCccCC---CC
Confidence 56777642 2335 46 7998755 699999999 998864 75
No 97
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=93.35 E-value=0.046 Score=38.77 Aligned_cols=28 Identities=21% Similarity=0.635 Sum_probs=22.7
Q ss_pred CCCcccce--ecCCceEEEccCCCCceeecCCcccee
Q 008587 435 TANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCE 469 (560)
Q Consensus 435 ~~~~~~C~--nt~gsy~C~C~~~~g~g~~gdg~~~C~ 469 (560)
+.|.+.|+ +..++|.|.|++ ||.|.. |+
T Consensus 11 C~ngg~C~~~~~~~~~~C~C~~----G~~G~~---Ce 40 (45)
T 1a3p_A 11 CLNGGVXMHIESLDSYTCNCVI----GYSGDR---CQ 40 (45)
T ss_dssp CSSSCEEEECTTTSSEEEECCT----TEETTT---TC
T ss_pred CCCCCEEEeecCCCCEEEEcCC----CCcCCc---CC
Confidence 35678897 778999999999 998764 75
No 98
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=93.33 E-value=0.034 Score=62.49 Aligned_cols=77 Identities=23% Similarity=0.487 Sum_probs=50.1
Q ss_pred cCCCCCCCcccceecCCceE---EEccCCCCceeecCCccceeee-------CCCCccCCC--CCCCCCCcCCCcccccc
Q 008587 430 CWQDKTANVTACKDTFRGRV---CECPLVDGVQFKGDGYSHCEVS-------GPGKCKINN--GGCWHESKDGHTYSACL 497 (560)
Q Consensus 430 C~~~~~~~~~~C~nt~gsy~---C~C~~~~g~g~~gdg~~~C~di-------~~~eC~~~~--~~C~~~~~~~~~~~~C~ 497 (560)
|..+++.|...|.+..|.|. |.|++ ||.|.. |+-. ..++|...+ ..|..++. |.
T Consensus 437 C~~~pc~n~~~C~~g~G~~~~G~C~C~~----Gy~G~~---Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~-------C~ 502 (690)
T 3fcs_B 437 CQAQAEPNSHRCNNGNGTFECGVCRCGP----GWLGSQ---CECSEEDYRPSQQDECSPREGQPVCSQRGE-------CL 502 (690)
T ss_dssp GGTTCCTTCTTTTTTSEEEETTEEEECT----TCCSSS---SCCSCC------CCCCSSSSSSCGGGGSEE-------EC
T ss_pred CcCCCCCCCCcccCCCCeEeCCceEeCC----CccCCc---eeeccCccCCccCCcCCCCCCCCCCCCCCE-------EE
Confidence 44444566788988888888 99999 999876 6421 014465322 22443322 55
Q ss_pred cCCCceeeCC----CCcccCCCcccc-cCCCCCC
Q 008587 498 DSENGKCQCP----PGFKGDGVKSCI-LMNAKRG 526 (560)
Q Consensus 498 n~gs~~C~C~----~Gf~~dg~~sC~-didEC~~ 526 (560)
.+.|.|+ +||.|.. |+ ++++|..
T Consensus 503 ---~g~C~C~~~~~~Gy~G~~---Ce~~~~~C~~ 530 (690)
T 3fcs_B 503 ---CGQCVCHSSDFGKITGKY---CECDDFSCVR 530 (690)
T ss_dssp ---SSSEEECCCSSCCCBSTT---SCBCSSCCCB
T ss_pred ---CCeeEeecCCCCCeeCCC---cCcccCcCcC
Confidence 3689999 9999774 75 6778874
No 99
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=93.18 E-value=0.11 Score=58.18 Aligned_cols=56 Identities=30% Similarity=0.623 Sum_probs=41.2
Q ss_pred CCcccceecCCceEEEccCCCCceeecCCcccee---eeCCCCccCCC-CCCCCCCcCCCcccccccCCCceeeC-CCCc
Q 008587 436 ANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE---VSGPGKCKINN-GGCWHESKDGHTYSACLDSENGKCQC-PPGF 510 (560)
Q Consensus 436 ~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~---di~~~eC~~~~-~~C~~~~~~~~~~~~C~n~gs~~C~C-~~Gf 510 (560)
.+++.|.+ +.|.|++ ||.|.. |+ ++ ++|...+ ..|..++. |.+ ..|.| ++||
T Consensus 537 ~~~G~C~~----g~C~C~~----Gy~G~~---CeC~~~~--~~C~~~~g~~C~~~G~-------C~~---g~C~C~~~Gy 593 (690)
T 3fcs_B 537 SGHGQCSC----GDCLCDS----DWTGYY---CNCTTRT--DTCMSSNGLLCSGRGK-------CEC---GSCVCIQPGS 593 (690)
T ss_dssp GGSEEEET----TEEEECT----TEESSS---SCEECCC--TTTBCTTSSBTSSSCE-------EET---TEEECCSTTC
T ss_pred CCCCEecC----CeeECcC----CCcCCC---CccCCCC--CcccCCCCCCCCCCCE-------EeC---CEEECCCCCc
Confidence 45678866 7999999 999876 64 45 7887533 45766543 765 48999 9999
Q ss_pred ccCC
Q 008587 511 KGDG 514 (560)
Q Consensus 511 ~~dg 514 (560)
.|..
T Consensus 594 ~G~~ 597 (690)
T 3fcs_B 594 YGDT 597 (690)
T ss_dssp BSTT
T ss_pred cCCC
Confidence 9764
No 100
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.56 E-value=0.072 Score=48.00 Aligned_cols=42 Identities=31% Similarity=0.711 Sum_probs=31.7
Q ss_pred CCCCcccCCC-CCCcCCCCCCCcccceecCCceEEEccCCCCceee--cCCccceee
Q 008587 417 DVETNECLDN-NGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFK--GDGYSHCEV 470 (560)
Q Consensus 417 c~didEC~~~-~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~d 470 (560)
+.++|||... .+.| .+.|.|+.++|.|.|++ ||. +++++ |++
T Consensus 114 ~~d~~eC~~~~~~~C-------~~~C~n~~g~~~C~C~~----Gy~l~~~~~~-C~~ 158 (159)
T 1nzi_A 114 ATDINECTDFVDVPC-------SHFCNNFIGGYFCSCPP----EYFLHDDMKN-CGV 158 (159)
T ss_dssp EEECCTTTC-CCCCS-------SSEEEEETTEEEEECCT----TCEECTTSSC-EEC
T ss_pred cccCcccCCCCCCCC-------CCcccCcCCCEEEecCC----CcEECCCCCc-ccc
Confidence 3578899754 4568 36799999999999999 666 56666 764
No 101
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=92.54 E-value=0.078 Score=54.14 Aligned_cols=21 Identities=33% Similarity=0.621 Sum_probs=13.8
Q ss_pred CcccceecCCceEEEccCCCCceeecCC
Q 008587 437 NVTACKDTFRGRVCECPLVDGVQFKGDG 464 (560)
Q Consensus 437 ~~~~C~nt~gsy~C~C~~~~g~g~~gdg 464 (560)
+++.|.+ .+.|.|++ ||.|..
T Consensus 189 ~~G~C~~---~~~C~C~~----G~~G~~ 209 (324)
T 2ygq_A 189 NGGLCVT---PGFCICPP----GFYGVN 209 (324)
T ss_dssp TTCEECS---SCCEECCT----TCBTTT
T ss_pred CCCEEcC---CCEEeCCC----CccCCC
Confidence 4566654 46788888 777654
No 102
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=92.30 E-value=0.17 Score=51.58 Aligned_cols=54 Identities=41% Similarity=0.964 Sum_probs=32.5
Q ss_pred CCCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccCCCceeeCCCCcccC
Q 008587 435 TANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGD 513 (560)
Q Consensus 435 ~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~gs~~C~C~~Gf~~d 513 (560)
+.+++.|.+ .+.|.|++ ||.|+. |+. +.|. ..|..... |.+ .+.|.|++||.|.
T Consensus 155 C~~~G~C~~---~~~C~C~~----G~~G~~---C~~---~~C~---~~C~~~G~-------C~~--~~~C~C~~G~~G~ 208 (324)
T 2ygq_A 155 CRNGGFCNE---RRICECPD----GFHGPH---CEK---ALCT---PRCMNGGL-------CVT--PGFCICPPGFYGV 208 (324)
T ss_dssp CCSSCEECT---TSCEECCT----TEESSS---SCE---ESSS---SCCCTTCE-------ECS--SCCEECCTTCBTT
T ss_pred CCCCCEECC---CCeEECCC----CCcCCC---CCC---CCCC---CCCCCCCE-------EcC--CCEEeCCCCccCC
Confidence 356677865 47999999 999864 764 3453 13543322 543 3456666666544
No 103
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=92.22 E-value=0.53 Score=44.22 Aligned_cols=95 Identities=14% Similarity=0.245 Sum_probs=56.5
Q ss_pred HHHhhhhhhcccCCCCceeeehHHHhccccCCCcc-ccHHHhHHHHHHH-cCCCHHHHccccCCCCCCCCchhhHHHHHH
Q 008587 287 LRQLCVFKVAKESKKPWVWWDYVTDFQIRCPMKDK-KYNKECAAAVIKS-LGLDAKKIEKCMGDPDADADNPVLKEEQDA 364 (560)
Q Consensus 287 lRqlCi~~~~~~~~~~~~ww~Y~~~f~~~C~~~~~-~y~~~Cs~~v~~~-~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~ 364 (560)
.--+|+++... -+||+|....-..=..... ....+=-..+.+. +|+|.+++++|+.+... ...+++..+.
T Consensus 84 ~aa~a~~~~~~-----~~f~~~~~aLf~~~~~~~~~~~~~~~L~~~a~~~~Gld~~~~~~~l~s~~~---~~~v~~~~~~ 155 (202)
T 3gha_A 84 LASEEVWKEDP-----DSFWDFHEKLFEKQPDTEQEWVTPGLLGDLAKSTTKIKPETLKENLDKETF---ASQVEKDSDL 155 (202)
T ss_dssp HHHHHHHHHCG-----GGHHHHHHHHHHHCCSSSSCCCCHHHHHHHHHHHSSSCHHHHHHHHHHTTT---HHHHHHHHHH
T ss_pred HHHHHHHhhCH-----HHHHHHHHHHHHhCccccccccCHHHHHHHHHHhcCCCHHHHHHHHhChHH---HHHHHHHHHH
Confidence 33456666543 3789988764321111111 1123334556777 89999999999986532 2334434332
Q ss_pred HcCCCCccceEecceeEEcCeeecccccc
Q 008587 365 QVGKGSRGDVTILPTLVVNNRQYRGKLEK 393 (560)
Q Consensus 365 q~~~~~~~~v~~~P~l~IN~~~~rG~l~~ 393 (560)
- .+..|.-.|+++|||..+.|-.+.
T Consensus 156 a----~~~gV~gtPtfvvnG~~~~G~~~~ 180 (202)
T 3gha_A 156 N----QKMNIQATPTIYVNDKVIKNFADY 180 (202)
T ss_dssp H----HHTTCCSSCEEEETTEECSCTTCH
T ss_pred H----HHcCCCcCCEEEECCEEecCCCCH
Confidence 2 223488899999999988776543
No 104
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=92.18 E-value=0.064 Score=48.36 Aligned_cols=48 Identities=27% Similarity=0.511 Sum_probs=34.4
Q ss_pred eeecCCccceeeeCCCCccCC-CCCCCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCccccc
Q 008587 459 QFKGDGYSHCEVSGPGKCKIN-NGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCIL 520 (560)
Q Consensus 459 g~~gdg~~~C~di~~~eC~~~-~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~d 520 (560)
||... +. +.++ ++|... ...|.+. |.|+ ++|.|.|++||. +++ ++|.+
T Consensus 107 GF~~~-y~-~~d~--~eC~~~~~~~C~~~---------C~n~~g~~~C~C~~Gy~l~~~~-~~C~~ 158 (159)
T 1nzi_A 107 GFAAY-YV-ATDI--NECTDFVDVPCSHF---------CNNFIGGYFCSCPPEYFLHDDM-KNCGV 158 (159)
T ss_dssp EEEEE-EE-EEEC--CTTTC-CCCCSSSE---------EEEETTEEEEECCTTCEECTTS-SCEEC
T ss_pred cceee-ee-cccC--cccCCCCCCCCCCc---------ccCcCCCEEEecCCCcEECCCC-Ccccc
Confidence 55542 23 7788 999864 3567653 9999 999999999998 455 56764
No 105
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=91.68 E-value=0.13 Score=54.56 Aligned_cols=60 Identities=32% Similarity=0.729 Sum_probs=37.1
Q ss_pred CCcccceecCCceEEEccCCCCceeecCCccceee-eC--------CCCccCCCCCCCCCCcCCCcccccccCCCceeeC
Q 008587 436 ANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV-SG--------PGKCKINNGGCWHESKDGHTYSACLDSENGKCQC 506 (560)
Q Consensus 436 ~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~d-i~--------~~eC~~~~~~C~~~~~~~~~~~~C~n~gs~~C~C 506 (560)
.+++.|.+ +.+.|.|++ ||.|.. |+. .. .++|. .++.|..... |. .+++.|.|
T Consensus 206 ~~~G~C~~--~~g~C~C~~----G~~G~~---Ce~~C~~g~~g~~C~~~C~-~~~~C~~~g~-------C~-~~~~~C~C 267 (423)
T 2gy5_A 206 MNNGVCHE--DTGECICPP----GFMGRT---CEKACELHTFGRTCKERCS-GQEGCKSYVF-------CL-PDPYGCSC 267 (423)
T ss_dssp CTTCEECT--TTCCEECCT----TEESTT---SCEECCTTEESTTSCEECC-STTTTTTCCE-------EE-TTTTEEEC
T ss_pred CCCCEEEC--CCCcEeCCC----CccCCC---cccccCCCCCCCCcCccCC-CCCCCCCCCE-------EC-CCCCeEEe
Confidence 34567765 567999999 999865 763 20 01232 1234443322 52 26789999
Q ss_pred CCCcccC
Q 008587 507 PPGFKGD 513 (560)
Q Consensus 507 ~~Gf~~d 513 (560)
++||.|.
T Consensus 268 ~~G~~G~ 274 (423)
T 2gy5_A 268 ATGWKGL 274 (423)
T ss_dssp CBTCBSG
T ss_pred CCCcccc
Confidence 9999865
No 106
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=90.61 E-value=1 Score=41.09 Aligned_cols=93 Identities=18% Similarity=0.227 Sum_probs=53.5
Q ss_pred HHhhhhhhcccCCCCceeeehHHHhcc-ccCCCccccHHHhHHHHHHHcCCCHHH---Hcccc--CCCCCCCCchhhHHH
Q 008587 288 RQLCVFKVAKESKKPWVWWDYVTDFQI-RCPMKDKKYNKECAAAVIKSLGLDAKK---IEKCM--GDPDADADNPVLKEE 361 (560)
Q Consensus 288 RqlCi~~~~~~~~~~~~ww~Y~~~f~~-~C~~~~~~y~~~Cs~~v~~~~gi~~~~---I~~C~--~ds~~~~~N~iLe~e 361 (560)
--+|++++. +.++|+|....-. +=.........+=-..+.+.+|+|.++ +.+|+ .+.. ....+++.
T Consensus 67 a~~~a~~~~-----~~~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~~~~~---~~~~v~~~ 138 (186)
T 3bci_A 67 ASHAVLMYA-----PKSFLDFQKQLFAAQQDENKEWLTKELLDKHIKQLHLDKETENKIIKDYKTKDSK---SWKAAEKD 138 (186)
T ss_dssp HHHHHHHHC-----GGGHHHHHHHHHHTCCCTTSCCCCHHHHHHHHHTTCCCHHHHHHHHHHHHSTTCH---HHHHHHHH
T ss_pred HHHHHHHhC-----HHHHHHHHHHHHhcCcccCCCCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhcCHH---HHHHHHHH
Confidence 345666553 2367888776422 111111112234455677788999999 99999 5432 12234433
Q ss_pred HHHHcCCCCccceEecceeEEcCeeeccccc
Q 008587 362 QDAQVGKGSRGDVTILPTLVVNNRQYRGKLE 392 (560)
Q Consensus 362 ~~~q~~~~~~~~v~~~P~l~IN~~~~rG~l~ 392 (560)
.+.- .+..|.-.|+++|||..+.|..+
T Consensus 139 ~~~a----~~~gv~GtPt~vvnG~~~~G~~~ 165 (186)
T 3bci_A 139 KKIA----KDNHIKTTPTAFINGEKVEDPYD 165 (186)
T ss_dssp HHHH----HHTTCCSSSEEEETTEECSCTTC
T ss_pred HHHH----HHcCCCCCCeEEECCEEcCCCCC
Confidence 3321 22348889999999988777544
No 107
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.54 E-value=0.16 Score=50.95 Aligned_cols=41 Identities=34% Similarity=0.618 Sum_probs=31.6
Q ss_pred CCcccCCC---CCCcCCCCCCCcccceecC------CceEEEccCCCCceeecCCcccee
Q 008587 419 ETNECLDN---NGGCWQDKTANVTACKDTF------RGRVCECPLVDGVQFKGDGYSHCE 469 (560)
Q Consensus 419 didEC~~~---~~~C~~~~~~~~~~C~nt~------gsy~C~C~~~~g~g~~gdg~~~C~ 469 (560)
+.|+|..+ +++| .+.|.+++ ++|.|.||. |+....|+++ |.
T Consensus 266 ~~n~C~~~~~~ng~C-------s~~C~~~p~~~~~~~~~~C~C~~--g~~l~~d~~~-C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGC-------QYLCLPAPQINPHSPKFTCACPD--GMLLARDMRS-CL 315 (316)
T ss_dssp CCCTTSSSSSGGGGC-------SSEEEECCCCSTTCCSEEEECCT--TCEECTTSSC-EE
T ss_pred ccccccccccCCCCc-------CcccCCCccccCCCCCeEeeCCC--CCEECCCCCc-cC
Confidence 67899887 8999 48999886 589999999 3333466766 75
No 108
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=90.44 E-value=0.14 Score=57.01 Aligned_cols=41 Identities=34% Similarity=0.784 Sum_probs=34.4
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecC-CceEEEccCCCCceee--cCCccceeee
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTF-RGRVCECPLVDGVQFK--GDGYSHCEVS 471 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~-gsy~C~C~~~~g~g~~--gdg~~~C~di 471 (560)
++|||..++++| .+.|.+++ ++|.|.|+. ||. .|+++ |.+.
T Consensus 264 ~~n~C~~~ng~C-------~~~C~~~~~~~~~C~C~~----g~~l~~d~~~-C~~~ 307 (628)
T 4a0p_A 264 GWNECASSNGHC-------SHLCLAVPVGGFVCGCPA----HYSLNADNRT-CSAP 307 (628)
T ss_dssp CCCTTTTTGGGC-------SSEEEEETTTEEEEECST----TCEECTTSSC-EECC
T ss_pred cceEeccCCCCc-------chhhhcCCCCCeeEEcCC----CcEecccCCc-Cccc
Confidence 679999999999 58999999 999999999 555 57766 8754
No 109
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=89.59 E-value=0.14 Score=37.66 Aligned_cols=28 Identities=18% Similarity=0.651 Sum_probs=22.6
Q ss_pred CCcccce--ecCCceEEEccCCCCceeecCCccceee
Q 008587 436 ANVTACK--DTFRGRVCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 436 ~~~~~C~--nt~gsy~C~C~~~~g~g~~gdg~~~C~d 470 (560)
.|.+.|+ +..++|.|.|++ ||.|.. |+.
T Consensus 15 ~nGG~C~~~~~~~~~~C~C~~----GytG~~---Ce~ 44 (53)
T 1nql_B 15 LHDGVCMYIEALDKYACNCVV----GYIGER---CQY 44 (53)
T ss_dssp CTTCEEEEETTTTEEEEEECT----TEESTT---SCE
T ss_pred CCCeEEeeecCCCCEEEecCC----CCcCCC---CCc
Confidence 4567887 677899999999 999865 764
No 110
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.30 E-value=0.099 Score=56.01 Aligned_cols=51 Identities=33% Similarity=0.840 Sum_probs=19.0
Q ss_pred ccceecCCceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccCCCceeeCCCCcccCC
Q 008587 439 TACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDG 514 (560)
Q Consensus 439 ~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~gs~~C~C~~Gf~~dg 514 (560)
..|.++ +.|.|++ ||.|.. |+ + ++|.. .|.+... |++. +.|.|++||+|..
T Consensus 402 G~C~~~---~~C~C~~----G~~G~~---C~-~--~~C~~---~C~~~g~-------C~~~--~~C~C~~G~~G~~ 452 (463)
T 2wg3_C 402 GYCTPT---GKCCCSP----GWEGDF---CR-T--AKCEP---ACRHGGV-------CVRP--NKCLCKKGYLGPQ 452 (463)
T ss_dssp EEECTT---SCEEECT----TEESTT---SC-E--ECC--------------------------------------
T ss_pred CccCCC---CeECCCC----CcCCCc---CC-c--CcCCC---CCCCCCE-------ECCC--CEEECCCCcccCC
Confidence 678753 4899999 999865 85 4 67863 6876543 8764 7899999999763
No 111
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=89.29 E-value=0.18 Score=51.00 Aligned_cols=43 Identities=35% Similarity=0.692 Sum_probs=32.5
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCC--ceEEEccCCCCceeecCCccceeee
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFR--GRVCECPLVDGVQFKGDGYSHCEVS 471 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~g--sy~C~C~~~~g~g~~gdg~~~C~di 471 (560)
..++|..++++| .+.|...++ +|.|.||. |+....|+++ |.+-
T Consensus 266 ~~n~C~~~ng~C-------s~~C~~~~~~~~~~C~C~~--g~~l~~d~~~-c~~~ 310 (318)
T 3sov_A 266 ATNPCGIDNGGC-------SHLCLMSPVKPFYQCACPT--GVKLLENGKT-CKDG 310 (318)
T ss_dssp CCCTTTTTGGGC-------SSEEEECSSTTSEEEECST--TCCBCTTSSC-BCC-
T ss_pred cccccccCCCCc-------ceEEecCCCCCCeEEECCC--CCEECCCCCC-CCCC
Confidence 368898899999 478999876 79999999 3333467766 8764
No 112
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=89.26 E-value=1.4 Score=39.63 Aligned_cols=79 Identities=15% Similarity=0.244 Sum_probs=50.4
Q ss_pred eeeehHHHhccccCCCccccHHHhHHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEc
Q 008587 304 VWWDYVTDFQIRCPMKDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVN 383 (560)
Q Consensus 304 ~ww~Y~~~f~~~C~~~~~~y~~~Cs~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN 383 (560)
++|.|...+-.. ...+..+=-..+.+.+|+|.+++++|+.+... ...+++..+.- .+..|.-.|+++||
T Consensus 83 ~~~~~~~~lf~~----~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a----~~~gv~gtPt~~i~ 151 (175)
T 3gyk_A 83 KYEAFHWALMGM----SGKANETGVLRIAREVGLDTEQLQRDMEAPEV---TAHIAQSMALA----QKLGFNGTPSFVVE 151 (175)
T ss_dssp CHHHHHHHHHTC----SSCCSHHHHHHHHHHTTCCHHHHHHHTTCHHH---HHHHHHHHHHH----HHHTCCSSSEEEET
T ss_pred HHHHHHHHHHhc----CCCCCHHHHHHHHHHcCCCHHHHHHHHhChHH---HHHHHHHHHHH----HHcCCccCCEEEEC
Confidence 577777665332 12233444556788899999999999986532 22333333321 12347889999999
Q ss_pred Ceeecccccc
Q 008587 384 NRQYRGKLEK 393 (560)
Q Consensus 384 ~~~~rG~l~~ 393 (560)
|..+.|..+.
T Consensus 152 g~~~~G~~~~ 161 (175)
T 3gyk_A 152 DALVPGFVEQ 161 (175)
T ss_dssp TEEECSCCCH
T ss_pred CEEeeCCCCH
Confidence 9888776543
No 113
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=89.14 E-value=0.16 Score=51.36 Aligned_cols=38 Identities=47% Similarity=0.938 Sum_probs=29.9
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-C--CceeeCCCCcc--cCCCcccccC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-E--NGKCQCPPGFK--GDGVKSCILM 521 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-g--s~~C~C~~Gf~--~dg~~sC~di 521 (560)
++|..++++|.+- |... + +|+|.||.||+ .|+ ++|.|-
T Consensus 268 n~C~~~ng~Cs~~---------C~~~~~~~~~~C~C~~g~~l~~d~-~~c~~~ 310 (318)
T 3sov_A 268 NPCGIDNGGCSHL---------CLMSPVKPFYQCACPTGVKLLENG-KTCKDG 310 (318)
T ss_dssp CTTTTTGGGCSSE---------EEECSSTTSEEEECSTTCCBCTTS-SCBCC-
T ss_pred cccccCCCCcceE---------EecCCCCCCeEEECCCCCEECCCC-CCCCCC
Confidence 8898888899765 9877 4 79999999997 455 667774
No 114
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=88.25 E-value=0.53 Score=52.22 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=49.9
Q ss_pred CCCcEEEEecCCCCHHHHHHHHHHcCCcEEEEEecCCCceeecCCCccccccccccCccceeEEEEcHHHHHHHHHHHhC
Q 008587 94 ALPNFVLVDRGDCFFALKVWNAQKAGASAVLVADDIEEALITMDTPEEDISSAKYIENITIPSALIDKSFGETLKKALSG 173 (560)
Q Consensus 94 ~~~~IvLV~RG~CsF~~Kv~nAq~aGA~avIV~n~~~~~l~~m~~~~~~~~~~~~~~~i~IPsv~Is~~~G~~L~~~l~~ 173 (560)
..++|+|.+|+ |..|..+++.+||.++|++++..+. .....||+++|+..+|..|++.+..
T Consensus 280 v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~~~~~----------------~~~~~lP~~~v~~~~g~~i~~~~~~ 340 (621)
T 3vta_A 280 LKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSNTRDY----------------ADSYPLPSSVLDPNDLLATLRYIYS 340 (621)
T ss_dssp TTTSEEECSSC---CCHHHHHHHHTTCSEEEEECSCCSS----------------CCCCSSSEEEECHHHHHHHHHHHHH
T ss_pred ccceEEEEecC---CChhHHhhhhcceeEEEEEecCCCc----------------ccccccceEEECHHHHHHHHHHHhc
Confidence 44799998765 6688999999999999999876331 0135789999999999999998875
Q ss_pred C
Q 008587 174 G 174 (560)
Q Consensus 174 ~ 174 (560)
.
T Consensus 341 ~ 341 (621)
T 3vta_A 341 I 341 (621)
T ss_dssp H
T ss_pred c
Confidence 3
No 115
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.55 E-value=0.25 Score=54.79 Aligned_cols=41 Identities=34% Similarity=0.828 Sum_probs=33.1
Q ss_pred CCcccCCCCCCcCCCCCCCcccceecCCceEEEccCCCCceeecCCcccee
Q 008587 419 ETNECLDNNGGCWQDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE 469 (560)
Q Consensus 419 didEC~~~~~~C~~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~ 469 (560)
..|+|..++++| .+.|.+++++|.|.||. |+....|+++ |.
T Consensus 577 ~~~~C~~~ng~C-------~~~C~~~~~~~~C~C~~--g~~l~~d~~~-C~ 617 (619)
T 3s94_A 577 GSNPCAEENGGC-------SHLCLYRPQGLRCACPI--GFELISDMKT-CI 617 (619)
T ss_dssp CCCGGGSGGGGC-------SSEEEEETTEEEEECCT--TCEECSSTTC-EE
T ss_pred ccccCCCCCCCh-------hHhhccCCCCeEEECCC--CCEECCCCCc-CC
Confidence 578999999999 58999999999999999 3333366665 75
No 116
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=87.19 E-value=0.29 Score=34.89 Aligned_cols=33 Identities=33% Similarity=0.809 Sum_probs=23.2
Q ss_pred CCccC-CCCCCCCCCcCCCcccccccC---CCceeeCCCCcccCC
Q 008587 474 GKCKI-NNGGCWHESKDGHTYSACLDS---ENGKCQCPPGFKGDG 514 (560)
Q Consensus 474 ~eC~~-~~~~C~~~~~~~~~~~~C~n~---gs~~C~C~~Gf~~dg 514 (560)
++|.. ...+|.+ .. |.+. ++|.|.|++||+|..
T Consensus 4 ~~C~~~~~~pC~n-G~-------C~~~~~~~~~~C~C~~GytG~~ 40 (46)
T 1k36_A 4 TKCSSDMNGYCLH-GQ-------CIYLVDMSQNYCRCEVGYTGVR 40 (46)
T ss_dssp ECCCTTCCSSCSS-EE-------EEEETTTTEEEEEECTTCSSTT
T ss_pred ccCCCCCCCCCCC-CE-------eeccCCCCCEEEECCCCCccCC
Confidence 66754 1256776 33 8753 589999999999873
No 117
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=86.02 E-value=0.29 Score=35.71 Aligned_cols=28 Identities=32% Similarity=0.681 Sum_probs=21.2
Q ss_pred CCccccee----cCCceEEEccCCCCceeecCCccceee
Q 008587 436 ANVTACKD----TFRGRVCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 436 ~~~~~C~n----t~gsy~C~C~~~~g~g~~gdg~~~C~d 470 (560)
.|.+.|++ ..++|.|.|++ ||.|.. |+.
T Consensus 17 ~NGGtC~~~~~~~~~~y~C~C~~----Gf~G~~---Ce~ 48 (52)
T 3ca7_A 17 LNDAHCFAVKIADLPVYSCECAI----GFMGQR---CEY 48 (52)
T ss_dssp CTTCEEEEEEETTEEEEEEECCT----TEESTT---SCE
T ss_pred CCCCEEecCccCCCCCEEEECCC----CCcCCC---Ccc
Confidence 45677876 35689999999 999864 764
No 118
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=85.44 E-value=0.25 Score=54.90 Aligned_cols=41 Identities=29% Similarity=0.703 Sum_probs=32.9
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC--CCceeeCCCCcc--cCCCcccccCCCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS--ENGKCQCPPGFK--GDGVKSCILMNAK 524 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~--~dg~~sC~didEC 524 (560)
++|..++++|.+- |.++ ++|.|.|++||. .|+ ++|.+.+++
T Consensus 266 n~C~~~ng~C~~~---------C~~~~~~~~~C~C~~g~~l~~d~-~~C~~~~~~ 310 (628)
T 4a0p_A 266 NECASSNGHCSHL---------CLAVPVGGFVCGCPAHYSLNADN-RTCSAPTTF 310 (628)
T ss_dssp CTTTTTGGGCSSE---------EEEETTTEEEEECSTTCEECTTS-SCEECCSSE
T ss_pred eEeccCCCCcchh---------hhcCCCCCeeEEcCCCcEecccC-CcCccccce
Confidence 9999888999875 9887 789999999997 355 678765433
No 119
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=84.91 E-value=0.41 Score=43.12 Aligned_cols=28 Identities=25% Similarity=0.754 Sum_probs=21.1
Q ss_pred cccC-CCceeeCCCCcccCCCcccccCCCCCC
Q 008587 496 CLDS-ENGKCQCPPGFKGDGVKSCILMNAKRG 526 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~dg~~sC~didEC~~ 526 (560)
|.+. ++|.|.|++||.|+. |+++.||..
T Consensus 133 C~~~~~~~~c~C~~g~~g~~---C~~~~~c~~ 161 (164)
T 3cfw_A 133 CVEIINNYTCNCDVGYYGPQ---CQFVQVDPR 161 (164)
T ss_dssp EEEETTEEEEEECTTCBSSS---SCBC-----
T ss_pred ecccCCCceeeeCCCccccc---ccccccCcc
Confidence 9988 999999999999874 999999964
No 120
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=84.56 E-value=0.25 Score=54.81 Aligned_cols=39 Identities=46% Similarity=1.055 Sum_probs=31.7
Q ss_pred CCCCccCCCCCCCCCCcCCCcccccccC-CCceeeCCCCcc--cCCCccccc
Q 008587 472 GPGKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPPGFK--GDGVKSCIL 520 (560)
Q Consensus 472 ~~~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~Gf~--~dg~~sC~d 520 (560)
+.++|..++++|.+. |.++ +++.|.|+.||. .|+ ++|..
T Consensus 577 ~~~~C~~~ng~C~~~---------C~~~~~~~~C~C~~g~~l~~d~-~~C~~ 618 (619)
T 3s94_A 577 GSNPCAEENGGCSHL---------CLYRPQGLRCACPIGFELISDM-KTCIV 618 (619)
T ss_dssp CCCGGGSGGGGCSSE---------EEEETTEEEEECCTTCEECSST-TCEEC
T ss_pred ccccCCCCCCChhHh---------hccCCCCeEEECCCCCEECCCC-CcCCC
Confidence 348999888999876 9999 889999999997 455 56753
No 121
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=84.17 E-value=0.42 Score=47.82 Aligned_cols=36 Identities=39% Similarity=0.877 Sum_probs=27.6
Q ss_pred CCccCC---CCCCCCCCcCCCcccccccC-------CCceeeCCCCcc--cCCCcccc
Q 008587 474 GKCKIN---NGGCWHESKDGHTYSACLDS-------ENGKCQCPPGFK--GDGVKSCI 519 (560)
Q Consensus 474 ~eC~~~---~~~C~~~~~~~~~~~~C~n~-------gs~~C~C~~Gf~--~dg~~sC~ 519 (560)
++|..+ +++|.+- |.++ ++|+|.||.||+ .|+ ++|.
T Consensus 268 n~C~~~~~~ng~Cs~~---------C~~~p~~~~~~~~~~C~C~~g~~l~~d~-~~C~ 315 (316)
T 1ijq_A 268 NWCERTTLSNGGCQYL---------CLPAPQINPHSPKFTCACPDGMLLARDM-RSCL 315 (316)
T ss_dssp CTTSSSSSGGGGCSSE---------EEECCCCSTTCCSEEEECCTTCEECTTS-SCEE
T ss_pred ccccccccCCCCcCcc---------cCCCccccCCCCCeEeeCCCCCEECCCC-CccC
Confidence 888876 7889765 8754 479999999997 455 5674
No 122
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=83.76 E-value=1.5 Score=35.89 Aligned_cols=63 Identities=29% Similarity=0.500 Sum_probs=49.4
Q ss_pred CcccceecC-CceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccC--CCceeeCCCCcc
Q 008587 437 NVTACKDTF-RGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDS--ENGKCQCPPGFK 511 (560)
Q Consensus 437 ~~~~C~nt~-gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~ 511 (560)
.++.|.... +.-.|.|.. +|..++.+ |.......|..++|+|...+. |... ..-.|.|...+.
T Consensus 14 ~NA~Cyr~~dg~EecRCll----nykk~~~k-CV~~~~~~C~~NNGGCd~nA~-------C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 14 ENAACYRYLDGTEEWRCLL----YFKEDAGK-CVPAPNMTCKDKNGGCAPEAE-------CKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp TTEEEEECTTSCEEEEECT----TEEEETTE-EEECTTCCTTTGGGGSCTTSE-------EEECTTSCEEEECCSTTE
T ss_pred CCcCeEEEcCCCEEEEEEC----CeEecCCE-EEcCCCCCccccCCCcCCCcc-------eeecCCCcEEEECCCCCC
Confidence 457787754 677999999 89887777 986523489999999999876 8766 467899998864
No 123
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=82.44 E-value=1.5 Score=49.13 Aligned_cols=56 Identities=32% Similarity=0.717 Sum_probs=32.9
Q ss_pred CCCcccceecCCceEEEcc------CCCCceeecCCcccee-eeCCCCccCCC-CCCCC--CCcCCCcccccccCCCcee
Q 008587 435 TANVTACKDTFRGRVCECP------LVDGVQFKGDGYSHCE-VSGPGKCKINN-GGCWH--ESKDGHTYSACLDSENGKC 504 (560)
Q Consensus 435 ~~~~~~C~nt~gsy~C~C~------~~~g~g~~gdg~~~C~-di~~~eC~~~~-~~C~~--~~~~~~~~~~C~n~gs~~C 504 (560)
|.+++.|.+ + .|.|+ + ||.|.. |+ +. ..|...+ ..|.. +. .|.+ ..|
T Consensus 484 Cs~~G~C~~--G--~C~C~~~~~~~~----G~~G~~---Ce~~~--~~C~~~~~~~C~~~~~G-------~C~~---g~C 540 (687)
T 3k6s_B 484 CSGLGDCVC--G--QCLCHTSDVPGK----LIYGQY---CECDT--INCERYNGQVCGGPGRG-------LCFC---GKC 540 (687)
T ss_dssp GGSSEEEET--T--EEEECCCCSTTC----CEESTT---SCEES--SCSCEETTEETSHHHHE-------EEET---TEE
T ss_pred CCCCCEEeC--C--EEEcCCCCCCCC----Cccccc---ccccc--ccccCCCCcCcCCCCCC-------eEEC---CEE
Confidence 456788873 2 89999 7 899875 65 34 5665321 23443 21 1442 256
Q ss_pred eCCCCcccC
Q 008587 505 QCPPGFKGD 513 (560)
Q Consensus 505 ~C~~Gf~~d 513 (560)
.|++||.|.
T Consensus 541 ~C~~G~~G~ 549 (687)
T 3k6s_B 541 RCHPGFEGS 549 (687)
T ss_dssp EECTTCCST
T ss_pred EcCCCCcCC
Confidence 666766655
No 124
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=81.88 E-value=0.43 Score=35.07 Aligned_cols=19 Identities=26% Similarity=0.968 Sum_probs=16.2
Q ss_pred cc--cC-CCceeeCCCCcccCC
Q 008587 496 CL--DS-ENGKCQCPPGFKGDG 514 (560)
Q Consensus 496 C~--n~-gs~~C~C~~Gf~~dg 514 (560)
|. +. ++|.|.|++||+|.-
T Consensus 20 C~~~~~~~~~~C~C~~GytG~~ 41 (53)
T 1nql_B 20 CMYIEALDKYACNCVVGYIGER 41 (53)
T ss_dssp EEEETTTTEEEEEECTTEESTT
T ss_pred EeeecCCCCEEEecCCCCcCCC
Confidence 87 56 889999999999873
No 125
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=81.02 E-value=0.78 Score=41.20 Aligned_cols=33 Identities=15% Similarity=0.485 Sum_probs=24.9
Q ss_pred CCcccceecCCceEEEccCCCCceeecCCccceeeeCCCCcc
Q 008587 436 ANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEVSGPGKCK 477 (560)
Q Consensus 436 ~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~ 477 (560)
.+...|.++.++|.|.|++ ||.|+. |+.+ .+|.
T Consensus 128 ~~~g~C~~~~~~~~c~C~~----g~~g~~---C~~~--~~c~ 160 (164)
T 3cfw_A 128 SGHGECVEIINNYTCNCDV----GYYGPQ---CQFV--QVDP 160 (164)
T ss_dssp CSSEEEEEETTEEEEEECT----TCBSSS---SCBC------
T ss_pred CCCCeecccCCCceeeeCC----Cccccc---cccc--ccCc
Confidence 3468899999999999999 899875 9887 7775
No 126
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=80.59 E-value=1.2 Score=49.82 Aligned_cols=54 Identities=22% Similarity=0.558 Sum_probs=36.5
Q ss_pred cccceecCCceEEEccCCCCceeecCCcccee---eeCCCCccCCC-CCCCCCCcCCCcccccccCCCceeeCCCCcccC
Q 008587 438 VTACKDTFRGRVCECPLVDGVQFKGDGYSHCE---VSGPGKCKINN-GGCWHESKDGHTYSACLDSENGKCQCPPGFKGD 513 (560)
Q Consensus 438 ~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~---di~~~eC~~~~-~~C~~~~~~~~~~~~C~n~gs~~C~C~~Gf~~d 513 (560)
++.|.+ ..|.|++ ||.|.. |+ +. +.|...+ ..|..+.. |.+ ..|.|++||.|.
T Consensus 532 ~G~C~~----g~C~C~~----G~~G~~---Cec~~~~--~~C~~~~g~~Cs~~G~-------C~~---g~C~C~~Gy~G~ 588 (687)
T 3k6s_B 532 RGLCFC----GKCRCHP----GFEGSA---CQCERTT--EGCLNPRRVECSGRGR-------CRC---NVCECHSGYQLP 588 (687)
T ss_dssp HEEEET----TEEEECT----TCCSTT---SCSCCSS--CTTBCTTCSBTSSSCC-------BCS---SCBCCSTTCCTT
T ss_pred CCeEEC----CEEEcCC----CCcCCC---CccCCCC--CCCCCCCCCCCCCCCc-------CCC---CEEECCCCCcCC
Confidence 456653 2899999 999876 65 23 6776432 34655432 755 579999999987
Q ss_pred C
Q 008587 514 G 514 (560)
Q Consensus 514 g 514 (560)
.
T Consensus 589 ~ 589 (687)
T 3k6s_B 589 L 589 (687)
T ss_dssp T
T ss_pred C
Confidence 4
No 127
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=77.85 E-value=0.89 Score=34.02 Aligned_cols=29 Identities=31% Similarity=0.659 Sum_probs=21.3
Q ss_pred CCccccee----cCCceEEEccCCCCceeecCCccceeee
Q 008587 436 ANVTACKD----TFRGRVCECPLVDGVQFKGDGYSHCEVS 471 (560)
Q Consensus 436 ~~~~~C~n----t~gsy~C~C~~~~g~g~~gdg~~~C~di 471 (560)
.|.+.|.. ..++|.|.|++ ||.|.. |+..
T Consensus 17 ~NGGtC~~~~~~~~~~~~C~C~~----Gf~G~~---Ce~~ 49 (58)
T 3ltf_D 17 LNDAHCFAVKIADLPVYSCECAI----GFMGQR---CEYK 49 (58)
T ss_dssp CSSCEEEEEEETTEEEEEEEECT----TEESSS---SCEE
T ss_pred CCCCEEeCCccCCCCCEEeECCC----CCccCC---Cccc
Confidence 45677773 34589999999 999865 8754
No 128
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=76.86 E-value=1.1 Score=48.99 Aligned_cols=31 Identities=16% Similarity=0.528 Sum_probs=25.7
Q ss_pred CCCCCccccee-cCCceEEEcc-CCCCceeecCCccceee
Q 008587 433 DKTANVTACKD-TFRGRVCECP-LVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 433 ~~~~~~~~C~n-t~gsy~C~C~-~~~g~g~~gdg~~~C~d 470 (560)
++|.|.+.|.+ ..++|.|.|+ + ||.|.. |+.
T Consensus 8 ~PC~ngG~C~~~~~~~y~C~C~~~----G~~G~~---Ce~ 40 (553)
T 1q4g_A 8 YPCQHQGICVRFGLDRYQCDCTRT----GYSGPN---CTI 40 (553)
T ss_dssp CCCCTTCEEEEETTTEEEEECTTS----SEETTT---TCE
T ss_pred CCCCCCCCcCCCCCCceEeeCCCC----CcCCCC---CCC
Confidence 34567899999 8999999999 9 999865 864
No 129
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=73.43 E-value=3.3 Score=35.67 Aligned_cols=30 Identities=30% Similarity=0.696 Sum_probs=22.7
Q ss_pred CCCCcccceecC--Cce-EEEccCCCCceeecCCccceee
Q 008587 434 KTANVTACKDTF--RGR-VCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 434 ~~~~~~~C~nt~--gsy-~C~C~~~~g~g~~gdg~~~C~d 470 (560)
+|.|.++|.+.. .+| .|.|++ +|.|.. |+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~----g~~G~~---Ce~ 34 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPK----KFGGQH---CEI 34 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCT----TEESTT---SCE
T ss_pred CCCCcCCcCCCcccCCCCCccCCC----CCCCcc---ccc
Confidence 346778898874 556 999999 999864 864
No 130
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=72.97 E-value=1.3 Score=32.07 Aligned_cols=14 Identities=36% Similarity=0.845 Sum_probs=12.8
Q ss_pred CCceeeCCCCcccC
Q 008587 500 ENGKCQCPPGFKGD 513 (560)
Q Consensus 500 gs~~C~C~~Gf~~d 513 (560)
++|.|.|++||.|.
T Consensus 31 ~~y~C~C~~Gf~G~ 44 (52)
T 3ca7_A 31 PVYSCECAIGFMGQ 44 (52)
T ss_dssp EEEEEECCTTEEST
T ss_pred CCEEEECCCCCcCC
Confidence 67999999999987
No 131
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=72.95 E-value=2.2 Score=44.87 Aligned_cols=49 Identities=37% Similarity=0.855 Sum_probs=34.0
Q ss_pred CceEEEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccCCCceeeCCCCcccCCCccccc
Q 008587 446 RGRVCECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCIL 520 (560)
Q Consensus 446 gsy~C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~gs~~C~C~~Gf~~dg~~sC~d 520 (560)
+.+.|.|++ ||.|+. |+.. |. .|..+.. |.+ +.+.|.|++||.|.. |+.
T Consensus 183 ~~~~c~C~~----g~~G~~---C~~~----C~----~C~~~G~-------C~~-~~g~C~C~~G~~G~~---Ce~ 231 (423)
T 2gy5_A 183 RLIVRRCEA----QKWGPE---CNHL----CT----ACMNNGV-------CHE-DTGECICPPGFMGRT---CEK 231 (423)
T ss_dssp EEEECSSCT----TEESTT---SCEE----CC----CCCTTCE-------ECT-TTCCEECCTTEESTT---SCE
T ss_pred cccCCcCCC----CCCCCC---CCCC----CC----CCCCCCE-------EEC-CCCcEeCCCCccCCC---ccc
Confidence 456789999 898865 7542 42 4655433 766 467899999999774 653
No 132
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=70.86 E-value=2.1 Score=35.90 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=29.6
Q ss_pred CCCCCCcCCCcccccccC--CCceeeCCCCcccCCCcccccCCC-CCCC
Q 008587 482 GCWHESKDGHTYSACLDS--ENGKCQCPPGFKGDGVKSCILMNA-KRGK 527 (560)
Q Consensus 482 ~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~~dg~~sC~didE-C~~~ 527 (560)
.|..++. |... |...|+|..||+++|. .|..++. |..+
T Consensus 17 ~Cp~NA~-------C~r~~~G~e~CrCl~gY~~dg~-~Cv~~Np~C~~n 57 (105)
T 1n1i_A 17 NVPENAA-------CYRYLDGTEEWRCLLGFKEVGG-KCVPASITCEEN 57 (105)
T ss_dssp CCCTTEE-------EEECTTSCEEEEECTTEEECSS-SEEECCCCTTSG
T ss_pred CCCCCCC-------eEECCCCCEeEEEECCeeccCC-EEEECCcchhhc
Confidence 5665544 8885 8899999999999994 5987788 6643
No 133
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=70.19 E-value=2.1 Score=46.98 Aligned_cols=31 Identities=26% Similarity=0.675 Sum_probs=24.4
Q ss_pred CCCCCccccee-cCCceEEEcc-CCCCceeecCCccceee
Q 008587 433 DKTANVTACKD-TFRGRVCECP-LVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 433 ~~~~~~~~C~n-t~gsy~C~C~-~~~g~g~~gdg~~~C~d 470 (560)
++|.|.+.|.+ ..++|.|.|+ + ||.|.. |+.
T Consensus 7 ~PC~ngG~C~~~~~~~y~C~C~~~----G~~G~~---Ce~ 39 (587)
T 3nt1_A 7 NPCQNRGECMSTGFDQYKCDCTRT----GFYGEN---CTT 39 (587)
T ss_dssp CCCCTTCEEEEEETTEEEEECTTS----SEETTT---TCE
T ss_pred CCCCCCCEeeCCCCCCeEEecCCC----CccCCC---CCC
Confidence 34467899996 4589999999 9 999865 764
No 134
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=67.91 E-value=1.6 Score=32.63 Aligned_cols=15 Identities=33% Similarity=0.767 Sum_probs=13.0
Q ss_pred CCceeeCCCCcccCC
Q 008587 500 ENGKCQCPPGFKGDG 514 (560)
Q Consensus 500 gs~~C~C~~Gf~~dg 514 (560)
..|.|.|++||.|..
T Consensus 31 ~~~~C~C~~Gf~G~~ 45 (58)
T 3ltf_D 31 PVYSCECAIGFMGQR 45 (58)
T ss_dssp EEEEEEECTTEESSS
T ss_pred CCEEeECCCCCccCC
Confidence 679999999999763
No 135
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=67.53 E-value=1.1 Score=42.34 Aligned_cols=59 Identities=15% Similarity=0.384 Sum_probs=38.2
Q ss_pred HHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeeeccccccc
Q 008587 330 AVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLEKG 394 (560)
Q Consensus 330 ~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~rG~l~~~ 394 (560)
.+.+.+|+|.+++++|+.+... ...+++..+.-. .+..|.-.|+++|||..+.|..+..
T Consensus 128 ~~a~~~Gld~~~~~~~l~s~~~---~~~v~~~~~~a~---~~~GV~GtPtfvvng~~~~G~~~~e 186 (205)
T 3gmf_A 128 DFMAARGMDRSTLDRCLSNEAL---AKKLAAETDEAI---NQYNVSGTPSFMIDGILLAGTHDWA 186 (205)
T ss_dssp HHHHTTTCCHHHHHHHHTCHHH---HHHHHHHHHHHH---HHHCCCSSSEEEETTEECTTCCSHH
T ss_pred HHHHHcCCCHHHHHHHHcCHHH---HHHHHHHHHHHH---HHcCCccCCEEEECCEEEeCCCCHH
Confidence 3556789999999999986531 122332322110 1234788999999999888875543
No 136
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=66.91 E-value=2.2 Score=44.94 Aligned_cols=17 Identities=29% Similarity=0.919 Sum_probs=0.0
Q ss_pred cccCCCceeeCCCCcccCC
Q 008587 496 CLDSENGKCQCPPGFKGDG 514 (560)
Q Consensus 496 C~n~gs~~C~C~~Gf~~dg 514 (560)
|.+.. .|.|++||.|..
T Consensus 379 C~~~~--~C~C~~G~~G~~ 395 (426)
T 3zyj_B 379 CHNNV--RCLCPAAYTGIL 395 (426)
T ss_dssp -------------------
T ss_pred cCCCC--CCcCCCCCcCCC
Confidence 65543 899999999864
No 137
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=66.16 E-value=3.1 Score=36.76 Aligned_cols=28 Identities=29% Similarity=0.663 Sum_probs=23.6
Q ss_pred CCcccceecCCceEEEccCCCCceeecCCccceee
Q 008587 436 ANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 436 ~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~d 470 (560)
.+...|.+..++|.|.|.+ ||.|+. |+.
T Consensus 128 ~~~g~C~~~~~~~~c~C~~----g~~g~~---Ce~ 155 (157)
T 1g1t_A 128 SGHGECVETINNYTCKCDP----GFSGLK---CEQ 155 (157)
T ss_dssp GGSEEEEEETTEEEEEECT----TEESTT---SCE
T ss_pred CCCCEeecCCCCeeEECCC----CccCcc---ccc
Confidence 3458899999999999999 999875 764
No 138
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=66.10 E-value=2.6 Score=40.21 Aligned_cols=57 Identities=32% Similarity=0.717 Sum_probs=37.3
Q ss_pred CCCcccceecCCceEEEccCCCCce------eecCCcccee-eeCCCCccCCC-CCCCCC--CcCCCcccccccCCCcee
Q 008587 435 TANVTACKDTFRGRVCECPLVDGVQ------FKGDGYSHCE-VSGPGKCKINN-GGCWHE--SKDGHTYSACLDSENGKC 504 (560)
Q Consensus 435 ~~~~~~C~nt~gsy~C~C~~~~g~g------~~gdg~~~C~-di~~~eC~~~~-~~C~~~--~~~~~~~~~C~n~gs~~C 504 (560)
+.+++.|.+ ..|.|++ | |.|.. |+ +. ++|.... ..|..+ . .|.+ ..|
T Consensus 145 Csg~G~C~~----g~C~C~~----gw~~~~~~~G~~---Ce~~~--~~C~~~~g~~C~~~~~G-------~C~~---g~C 201 (217)
T 2p28_B 145 CSGLGDCVC----GQCLCHT----SDVPGKLIYGQY---CECDT--INCERYNGQVCGGPGRG-------LCFC---GKC 201 (217)
T ss_dssp GGGTEEEET----TEEEECC----CCSTTCCEESTT---SCEES--SCSCEETTEETTCTTTE-------EEET---TEE
T ss_pred CCCCCEEeC----CceECCC----CCCCcccEECCC---cccCC--ccCCCCCCCCCCCCCCc-------EEeC---Cee
Confidence 345678874 3799999 7 67764 76 44 6676432 146543 2 2664 489
Q ss_pred eCCCCcccCC
Q 008587 505 QCPPGFKGDG 514 (560)
Q Consensus 505 ~C~~Gf~~dg 514 (560)
.|.+||.|..
T Consensus 202 ~C~~G~~G~~ 211 (217)
T 2p28_B 202 RCHPGFEGSA 211 (217)
T ss_dssp EECTTEESTT
T ss_pred ECCCCCccCC
Confidence 9999999874
No 139
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=64.77 E-value=2.5 Score=35.14 Aligned_cols=38 Identities=24% Similarity=0.587 Sum_probs=29.2
Q ss_pred CCCCCCcCCCcccccccC--CCceeeCCCCcccCCCcccccC--CCCCCC
Q 008587 482 GCWHESKDGHTYSACLDS--ENGKCQCPPGFKGDGVKSCILM--NAKRGK 527 (560)
Q Consensus 482 ~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~~dg~~sC~di--dEC~~~ 527 (560)
.|..++. |.+. +...|+|.+||++||. .|..+ +.|..+
T Consensus 11 ~C~~NA~-------C~r~~~g~e~C~C~~gy~gdg~-~Cv~~~~~sC~~n 52 (99)
T 1ob1_C 11 QCPQNSG-------CFRHLDEREECKCLLNYKQEGD-KCVENPNPTCNEN 52 (99)
T ss_dssp CCCTTEE-------EECCTTSCCEEEECTTEEEETT-EEEECSCCCSTTG
T ss_pred CCCCCCC-------eEEcCCCCEEEEecCCeecCCC-eEeeCCCCChhhc
Confidence 4655554 8775 8899999999999994 58876 478764
No 140
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=63.27 E-value=2.9 Score=45.58 Aligned_cols=32 Identities=25% Similarity=0.761 Sum_probs=26.3
Q ss_pred CCccCCCCCCCCCCcCCCccccccc-C-CCceeeCC-CCcccCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLD-S-ENGKCQCP-PGFKGDG 514 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n-~-gs~~C~C~-~Gf~~dg 514 (560)
++|.. .+|.+.+. |.+ . ++|.|.|+ +||.|..
T Consensus 3 d~C~~--~PC~ngG~-------C~~~~~~~y~C~C~~~G~~G~~ 37 (553)
T 1q4g_A 3 NPCCY--YPCQHQGI-------CVRFGLDRYQCDCTRTGYSGPN 37 (553)
T ss_dssp CGGGG--CCCCTTCE-------EEEETTTEEEEECTTSSEETTT
T ss_pred CcCCC--CCCCCCCC-------cCCCCCCceEeeCCCCCcCCCC
Confidence 78874 47987754 999 7 99999999 9999863
No 141
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=61.48 E-value=2.2 Score=38.24 Aligned_cols=51 Identities=22% Similarity=0.308 Sum_probs=35.2
Q ss_pred HHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCe
Q 008587 328 AAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNR 385 (560)
Q Consensus 328 s~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~ 385 (560)
...+.+.+|+|.+++++|+.+.. ....+++..+.- .+.+|.--|+++|||+
T Consensus 109 l~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a----~~~gv~gTPtfiINGk 159 (184)
T 4dvc_A 109 LRQIFLDEGIDAAKFDAAYNGFA---VDSMVHRFDKQF----QDSGLTGVPAVVVNNR 159 (184)
T ss_dssp HHHHHHTTTCCHHHHHHHHTSHH---HHHHHHHHHHHH----HHHTCCSSSEEEETTT
T ss_pred HHHHHHHhCCCHHHHHHHHhCHH---HHHHHHHHHHHH----HHcCCCcCCEEEECCE
Confidence 45677888999999999998653 223344333321 2345888999999996
No 142
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=61.11 E-value=3.2 Score=45.51 Aligned_cols=32 Identities=28% Similarity=0.839 Sum_probs=25.4
Q ss_pred CCccCCCCCCCCCCcCCCccccccc-C-CCceeeCC-CCcccCC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLD-S-ENGKCQCP-PGFKGDG 514 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n-~-gs~~C~C~-~Gf~~dg 514 (560)
++|.. .+|.+++. |.+ . ++|.|.|+ +||.|..
T Consensus 2 d~C~s--~PC~ngG~-------C~~~~~~~y~C~C~~~G~~G~~ 36 (587)
T 3nt1_A 2 NPCCS--NPCQNRGE-------CMSTGFDQYKCDCTRTGFYGEN 36 (587)
T ss_dssp CTTTT--CCCCTTCE-------EEEEETTEEEEECTTSSEETTT
T ss_pred CCCCC--CCCCCCCE-------eeCCCCCCeEEecCCCCccCCC
Confidence 77874 47987754 996 4 89999999 9999764
No 143
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=58.94 E-value=7.1 Score=40.41 Aligned_cols=33 Identities=27% Similarity=0.723 Sum_probs=23.9
Q ss_pred CCCCCCcccceecCCceEEEccCCCCceeecCCccceee
Q 008587 432 QDKTANVTACKDTFRGRVCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 432 ~~~~~~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~d 470 (560)
.++|.|.+.|++...+|.|.|+. .+|.|.. |+.
T Consensus 190 ~~pC~n~g~C~~~~~~~~C~C~~---~~~~G~~---C~~ 222 (410)
T 3asi_A 190 EDSCSNQGVCLQQWDGFSCDCSM---TSFSGPL---CND 222 (410)
T ss_dssp TTSSSTTCEEEECSSSEEEECTT---TSEESTT---SCE
T ss_pred cccCCCCCEecCCCCCceEeccC---CcccCCC---CCC
Confidence 34456778999999999999983 1676653 653
No 144
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=58.78 E-value=7.4 Score=41.97 Aligned_cols=38 Identities=24% Similarity=0.675 Sum_probs=28.7
Q ss_pred CCccCC-CCCCCCCCcCCCcccccccC--CCceeeCCCCcccCCCcccc
Q 008587 474 GKCKIN-NGGCWHESKDGHTYSACLDS--ENGKCQCPPGFKGDGVKSCI 519 (560)
Q Consensus 474 ~eC~~~-~~~C~~~~~~~~~~~~C~n~--gs~~C~C~~Gf~~dg~~sC~ 519 (560)
+.|... .+.|+.++. |+.+ ++|.|.|+.||.|+|. .|.
T Consensus 19 ~~c~~~~~~~c~~~a~-------C~~~~~~~~~c~C~~G~ag~G~-~c~ 59 (551)
T 3fby_A 19 RFCPDGSPSECHEHAD-------CVLERDGSRSCVCAVGWAGNGI-LCG 59 (551)
T ss_dssp CBCTTSSBCCCCTTEE-------EEECTTSCEEEEECTTEESSSS-SCE
T ss_pred ccCCCCCCCCCCCCCe-------eEeCCCCCEecCCCCCCCCCCc-ccC
Confidence 345432 357888765 9887 8899999999999985 474
No 145
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=52.81 E-value=5.7 Score=36.22 Aligned_cols=57 Identities=12% Similarity=0.203 Sum_probs=38.2
Q ss_pred HhHHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeeecc
Q 008587 326 ECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRG 389 (560)
Q Consensus 326 ~Cs~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~rG 389 (560)
+=-..+.+.+|+|.+++++|+.+... ...+++..+.- .+.+|.-.|+++|||..+.+
T Consensus 108 ~~l~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a----~~~gv~gtPt~ving~~~~~ 164 (195)
T 3hd5_A 108 KAMGEWAASQGVDRAKFDSVFDSFSV---QTQVQRASQLA----EAAHIDGTPAFAVGGRYMTS 164 (195)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHTCHHH---HHHHHHHHHHH----HHTTCCSSSEEEETTTEEEC
T ss_pred HHHHHHHHHhCCCHHHHHHHHcCHHH---HHHHHHHHHHH----HHhCCCcCceEEECCEEEeC
Confidence 33456778899999999999986432 22344333322 22347889999999987654
No 146
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=50.53 E-value=6.1 Score=42.56 Aligned_cols=13 Identities=38% Similarity=1.073 Sum_probs=0.0
Q ss_pred CceeeCCCCcccC
Q 008587 501 NGKCQCPPGFKGD 513 (560)
Q Consensus 501 s~~C~C~~Gf~~d 513 (560)
.+.|.|++||.|.
T Consensus 509 tG~C~C~~G~~G~ 521 (525)
T 4aqs_A 509 SGQCSCLPHMIGR 521 (525)
T ss_dssp -------------
T ss_pred CCeeECCCCCcCC
Confidence 3479999999976
No 147
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=49.85 E-value=5.2 Score=36.81 Aligned_cols=59 Identities=15% Similarity=0.187 Sum_probs=39.5
Q ss_pred HhHHHHHHHc-CCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeeecccc
Q 008587 326 ECAAAVIKSL-GLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKL 391 (560)
Q Consensus 326 ~Cs~~v~~~~-gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~rG~l 391 (560)
+=-..+.+.+ |+|.+++++|+.+.. ....+++..+.- .+..|.-.|+++|||..+.|..
T Consensus 110 ~~l~~~a~~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a----~~~gv~gtPt~vvng~~~~~~~ 169 (193)
T 3hz8_A 110 EVLKKWLGEQTAFDGKKVLAAYESPE---SQARADKMQELT----ETFQIDGVPTVIVGGKYKVEFA 169 (193)
T ss_dssp HHHHHHHHHCTTTTHHHHHHHHHSHH---HHHHHHHHHHHH----HHTTCCSSSEEEETTTEEECCS
T ss_pred HHHHHHHHHccCCCHHHHHHHHcCHH---HHHHHHHHHHHH----HHhCCCcCCEEEECCEEEecCC
Confidence 3345577788 999999999998653 223343333321 2234788999999998877643
No 148
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=48.93 E-value=4.7 Score=35.51 Aligned_cols=19 Identities=42% Similarity=1.137 Sum_probs=17.4
Q ss_pred cccC-CCceeeCCCCcccCC
Q 008587 496 CLDS-ENGKCQCPPGFKGDG 514 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~dg 514 (560)
|.+. .+|.|.|.+||+|+-
T Consensus 133 C~~~~~~~~c~C~~g~~g~~ 152 (157)
T 1g1t_A 133 CVETINNYTCKCDPGFSGLK 152 (157)
T ss_dssp EEEETTEEEEEECTTEESTT
T ss_pred eecCCCCeeEECCCCccCcc
Confidence 9888 999999999999873
No 149
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=48.14 E-value=6.1 Score=36.49 Aligned_cols=57 Identities=23% Similarity=0.313 Sum_probs=38.3
Q ss_pred HHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeeeccccc
Q 008587 329 AAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLE 392 (560)
Q Consensus 329 ~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~rG~l~ 392 (560)
..+.+.+|+|.+++.+++.+... ...|+++.+.- .+..|.-.|+++|||..+.|...
T Consensus 127 ~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a----~~~Gv~G~Ptfvi~g~~~~G~~~ 183 (203)
T 2imf_A 127 ALVSEKLGWDRSAFEHFLSSNAA---TERYDEQTHAA----IERKVFGVPTMFLGDEMWWGNDR 183 (203)
T ss_dssp HHHHHHHTCCHHHHHHHHHSHHH---HHHHHHHHHHH----HHTTCCSSSEEEETTEEEESGGG
T ss_pred HHHHHHcCCCHHHHHHHhcCHHH---HHHHHHHHHHH----HHCCCCcCCEEEECCEEEECCCC
Confidence 45566789999999999986431 22333333321 12348889999999998887644
No 150
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=47.31 E-value=6.5 Score=37.44 Aligned_cols=58 Identities=10% Similarity=0.252 Sum_probs=39.1
Q ss_pred HHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCc-cceEecceeEE---cCeeeccccc
Q 008587 328 AAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSR-GDVTILPTLVV---NNRQYRGKLE 392 (560)
Q Consensus 328 s~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~-~~v~~~P~l~I---N~~~~rG~l~ 392 (560)
-..+.+.+|+|.+++++|+.+.. ....++++.+.- .+ ..|.-.|+++| ||..+.|.+.
T Consensus 129 L~~iA~~~Gld~~~~~~~l~s~~---~~~~v~~~~~~a----~~~~GV~GtPtfvv~~~nG~~~~Ga~~ 190 (226)
T 3f4s_A 129 LQRIAALSNLKQDAFNQCINDKK---IMDKIVNDKSLA----INKLGITAVPIFFIKLNDDKSYIEHNK 190 (226)
T ss_dssp HHHHHHHTTCCHHHHHHHHTCHH---HHHHHHHHHHHH----HHHHCCCSSCEEEEEECCTTCCCCGGG
T ss_pred HHHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHH----HHHcCCCcCCEEEEEcCCCEEeeCCCC
Confidence 34567788999999999998643 222333333321 22 34788999999 9998877654
No 151
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=47.30 E-value=13 Score=35.24 Aligned_cols=66 Identities=21% Similarity=0.455 Sum_probs=37.7
Q ss_pred CcccceecCCceEEEccCCCCceeecCCcccee-eeCC-------CCccCC--CCCCCCCCcCCCcccccccCCCceeeC
Q 008587 437 NVTACKDTFRGRVCECPLVDGVQFKGDGYSHCE-VSGP-------GKCKIN--NGGCWHESKDGHTYSACLDSENGKCQC 506 (560)
Q Consensus 437 ~~~~C~nt~gsy~C~C~~~~g~g~~gdg~~~C~-di~~-------~eC~~~--~~~C~~~~~~~~~~~~C~n~gs~~C~C 506 (560)
+++.|.. ..|.|++ ||.|.. |+ +.+. ..|... ...|..+. .|.+ ..|.|
T Consensus 100 g~G~C~~----g~C~C~~----G~~G~~---Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G-------~C~~---g~C~C 158 (217)
T 2p28_B 100 GKGFLEC----GICRCDT----GYIGKN---CECQTQGRSSQELEGSCRKDNNSIICSGLG-------DCVC---GQCLC 158 (217)
T ss_dssp TSEEEET----TEEEECT----TEESTT---SCEECCCCC-GGGGGGGBSSTTSCBGGGTE-------EEET---TEEEE
T ss_pred CCceEEC----CEEECCC----CccCCc---ccccCcccccccCCCcCCCCCCCCCCCCCC-------EEeC---CceEC
Confidence 3466653 4899999 999876 54 2200 124321 12233221 2543 57999
Q ss_pred CCCc------ccCCCcccc-cCCCCCC
Q 008587 507 PPGF------KGDGVKSCI-LMNAKRG 526 (560)
Q Consensus 507 ~~Gf------~~dg~~sC~-didEC~~ 526 (560)
++|| .|. .|+ ++++|..
T Consensus 159 ~~gw~~~~~~~G~---~Ce~~~~~C~~ 182 (217)
T 2p28_B 159 HTSDVPGKLIYGQ---YCECDTINCER 182 (217)
T ss_dssp CCCCSTTCCEEST---TSCEESSCSCE
T ss_pred CCCCCCcccEECC---CcccCCccCCC
Confidence 9994 554 386 5778864
No 152
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=46.21 E-value=7.3 Score=36.10 Aligned_cols=60 Identities=15% Similarity=0.280 Sum_probs=39.4
Q ss_pred HhHHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeeeccccc
Q 008587 326 ECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQYRGKLE 392 (560)
Q Consensus 326 ~Cs~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~rG~l~ 392 (560)
+=-..+.+.+|+|.+++.+++.+... ...|+++.+.-. +..|.-.|+++|||..+.|...
T Consensus 130 ~~L~~~a~~~Gld~~~~~~~~~s~~~---~~~v~~~~~~a~----~~Gv~GvPtfvv~g~~~~G~~~ 189 (202)
T 3fz5_A 130 EAVSRLGPEVGLEPEALLAGIADPAL---KETVRKIGEDAV----ARGIFGSPFFLVDDEPFWGWDR 189 (202)
T ss_dssp HHHHTTHHHHTCCHHHHHHHTTCHHH---HHHHHHHHHHHH----HTTCCSSSEEEETTEEEESGGG
T ss_pred HHHHHHHHHcCCCHHHHHHHhcCHHH---HHHHHHHHHHHH----HCCCCcCCEEEECCEEEecCCC
Confidence 33344666789999999999986431 222333333211 2248889999999999888744
No 153
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=44.83 E-value=8.7 Score=35.36 Aligned_cols=52 Identities=12% Similarity=0.207 Sum_probs=35.5
Q ss_pred HHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCee
Q 008587 328 AAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ 386 (560)
Q Consensus 328 s~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~ 386 (560)
-..+.+.+|+|.+++++|+.+.. ....+++..+.- .+.+|.-.|+++|||..
T Consensus 110 L~~~a~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a----~~~gv~gtPtfvvnG~~ 161 (191)
T 3l9s_A 110 IRKVFVDAGVKGEDYDAAWNSFV---VKSLVAQQEKAA----ADLQLQGVPAMFVNGKY 161 (191)
T ss_dssp HHHHHHHTTCCHHHHHHHHTSHH---HHHHHHHHHHHH----HHTTCCSSSEEEETTTE
T ss_pred HHHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHH----HHhCCcccCEEEECCEE
Confidence 45677789999999999998643 223344333322 23348889999999874
No 154
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=44.13 E-value=3.2 Score=44.22 Aligned_cols=55 Identities=25% Similarity=0.538 Sum_probs=31.4
Q ss_pred EEccCCCCceeecCCccceeeeCCCCccCCCCCCCCCCcCCCcccccccCCCceeeCCCCcccCCCcccccCCCCCCCCC
Q 008587 450 CECPLVDGVQFKGDGYSHCEVSGPGKCKINNGGCWHESKDGHTYSACLDSENGKCQCPPGFKGDGVKSCILMNAKRGKPV 529 (560)
Q Consensus 450 C~C~~~~g~g~~gdg~~~C~di~~~eC~~~~~~C~~~~~~~~~~~~C~n~gs~~C~C~~Gf~~dg~~sC~didEC~~~~~ 529 (560)
+.|+. +|.+.. |+. ++|.. .|.+. .|.+. +.|.|++||.|.. |+ +++|.. .
T Consensus 379 ~~C~~----~~~g~~---c~~---~~C~~---~C~nG--------~C~~~--~~C~C~~G~~G~~---C~-~~~C~~--~ 429 (463)
T 2wg3_C 379 EECRA----TVQPAQ---TLT---SECSR---LCRNG--------YCTPT--GKCCCSPGWEGDF---CR-TAKCEP--A 429 (463)
T ss_dssp GGGCC----CCCCCC---CCC---CHHHH---HCCSE--------EECTT--SCEEECTTEESTT---SC-EECC-----
T ss_pred ccCCC----CCcCCC---Ccc---ccccC---CCCCC--------ccCCC--CeECCCCCcCCCc---CC-cCcCCC--C
Confidence 56666 666553 642 66763 37642 28754 5799999999873 84 567865 4
Q ss_pred CCCC
Q 008587 530 SALS 533 (560)
Q Consensus 530 C~~~ 533 (560)
|.++
T Consensus 430 C~~~ 433 (463)
T 2wg3_C 430 CRHG 433 (463)
T ss_dssp ----
T ss_pred CCCC
Confidence 6553
No 155
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=43.99 E-value=7.1 Score=35.33 Aligned_cols=53 Identities=17% Similarity=0.240 Sum_probs=35.1
Q ss_pred HHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeee
Q 008587 328 AAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQY 387 (560)
Q Consensus 328 s~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~ 387 (560)
-..+.+.+|+|.+++++|+.+.. ....+++..+.- .+..|.-.|+++|||..+
T Consensus 114 l~~~a~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a----~~~gv~gtPt~ving~~~ 166 (193)
T 2rem_A 114 LAVFYAGYGVQPDRFVATFNGPE---VEKRFQAARAYA----LKVRPVGTPTIVVNGRYM 166 (193)
T ss_dssp HHHHHHTTTCCHHHHHHHHTSHH---HHHHHHHHHHHH----HHHCCSSSSEEEETTTEE
T ss_pred HHHHHHHcCCCHHHHHHHHhChH---HHHHHHHHHHHH----HHhCCCCCCeEEECCEEE
Confidence 34567778999999999997642 123344333321 123478899999999755
No 156
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=43.77 E-value=13 Score=26.83 Aligned_cols=19 Identities=26% Similarity=0.768 Sum_probs=15.2
Q ss_pred CCceeeCCCCcccCCCcccccC
Q 008587 500 ENGKCQCPPGFKGDGVKSCILM 521 (560)
Q Consensus 500 gs~~C~C~~Gf~~dg~~sC~di 521 (560)
..+.|.|++||+|.. |+-.
T Consensus 28 ~~~~C~C~~gy~G~R---Ce~~ 46 (50)
T 3e50_C 28 DKPACVCHSGYVGAR---CEHA 46 (50)
T ss_pred CCeEEECCCCCcccC---CCce
Confidence 678999999999883 6543
No 157
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=42.91 E-value=28 Score=30.76 Aligned_cols=30 Identities=33% Similarity=0.810 Sum_probs=22.1
Q ss_pred CCCCcccceec--CCce-EEEccCCCCceeecCCccceee
Q 008587 434 KTANVTACKDT--FRGR-VCECPLVDGVQFKGDGYSHCEV 470 (560)
Q Consensus 434 ~~~~~~~C~nt--~gsy-~C~C~~~~g~g~~gdg~~~C~d 470 (560)
+|.|.+.|++. +..+ .|.|++ ||.|+. |+.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~----g~~G~~---Cei 46 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPK----KFGGQH---CEI 46 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCT----TEESTT---SCE
T ss_pred CCCCCCCcCCCccccCCccccCCC----CCCCCc---eec
Confidence 45677888775 3566 899999 898764 763
No 158
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=40.22 E-value=14 Score=29.37 Aligned_cols=23 Identities=30% Similarity=0.901 Sum_probs=17.4
Q ss_pred cce--ecCCceEEEccCCCCceeecCCcccee
Q 008587 440 ACK--DTFRGRVCECPLVDGVQFKGDGYSHCE 469 (560)
Q Consensus 440 ~C~--nt~gsy~C~C~~~~g~g~~gdg~~~C~ 469 (560)
.|. ...+.+.|.|++ ||.|+. |+
T Consensus 52 ~C~~i~~~~~~~C~C~~----GYtG~R---CE 76 (79)
T 1xdt_R 52 ECKYVKELRAPSCICHP----GYHGER---CH 76 (79)
T ss_dssp EECCBGGGTBCCEEECT----TEESTT---CC
T ss_pred EeeeecCCCCeEEEcCC----Cccccc---cc
Confidence 563 334688999999 999875 75
No 159
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=40.09 E-value=8.9 Score=34.79 Aligned_cols=78 Identities=19% Similarity=0.112 Sum_probs=45.7
Q ss_pred eeeehHHHhccccCC-CccccHHHhHHHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEE
Q 008587 304 VWWDYVTDFQIRCPM-KDKKYNKECAAAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVV 382 (560)
Q Consensus 304 ~ww~Y~~~f~~~C~~-~~~~y~~~Cs~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~I 382 (560)
++|.|....-..=.. .......+=-..+.+.+|+|.+++.+|+.+... ...|++..+.- .+.+|.-.|+++|
T Consensus 86 ~~~~~~~~lf~~~~~~~~~~~~~~~l~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a----~~~gv~gtPt~~v 158 (192)
T 3h93_A 86 VEHDVHNAVFEAIHKEHKKLATPEEMADFLAGKGVDKEKFLSTYNSFAI---KGQMEKAKKLA----MAYQVTGVPTMVV 158 (192)
T ss_dssp CCHHHHHHHHHHHHTSCCCCCSHHHHHHHHHTTTCCHHHHHHHHTCHHH---HHHHHHHHHHH----HHHTCCSSSEEEE
T ss_pred CHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHcCCCHHHHHHHhhCHHH---HHHHHHHHHHH----HHhCCCCCCeEEE
Confidence 467776654321111 111122444566788889999999999986531 22333333321 1234788999999
Q ss_pred cCeeec
Q 008587 383 NNRQYR 388 (560)
Q Consensus 383 N~~~~r 388 (560)
||..+.
T Consensus 159 ng~~~~ 164 (192)
T 3h93_A 159 NGKYRF 164 (192)
T ss_dssp TTTEEE
T ss_pred CCEEEe
Confidence 987653
No 160
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=38.18 E-value=10 Score=40.82 Aligned_cols=14 Identities=29% Similarity=0.646 Sum_probs=10.8
Q ss_pred CceeeCCCCcccCC
Q 008587 501 NGKCQCPPGFKGDG 514 (560)
Q Consensus 501 s~~C~C~~Gf~~dg 514 (560)
.+.|.|++||.|..
T Consensus 459 tg~C~C~~g~~G~~ 472 (525)
T 4aqs_A 459 TGYCYCKRLVTGQR 472 (525)
T ss_dssp TCCBCBCTTCCSTT
T ss_pred CCEEECCCCCcCCC
Confidence 45699999998763
No 161
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=36.99 E-value=12 Score=24.32 Aligned_cols=24 Identities=29% Similarity=0.600 Sum_probs=17.9
Q ss_pred eeeCCCCcccCCCcccccCCCCCC
Q 008587 503 KCQCPPGFKGDGVKSCILMNAKRG 526 (560)
Q Consensus 503 ~C~C~~Gf~~dg~~sC~didEC~~ 526 (560)
.|.|++||..+....|...++|..
T Consensus 6 GC~C~~G~vrn~~G~CV~~~~Cp~ 29 (32)
T 3ssb_I 6 KCYCEDGYARDVNGKCIPIKDCPK 29 (32)
T ss_dssp EEEECTTEEECTTSCEEEGGGCCC
T ss_pred CCCcCCCcEECCCCCEECHHHCcC
Confidence 599999997543335988888864
No 162
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=36.91 E-value=13 Score=33.59 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=36.8
Q ss_pred HHHHHHHc-CCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCee-eccc
Q 008587 328 AAAVIKSL-GLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ-YRGK 390 (560)
Q Consensus 328 s~~v~~~~-gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~-~rG~ 390 (560)
...+++.+ |+|.+++++|+.+.. ....+++..+.- .+..|.-.|+++|||.. ..|.
T Consensus 108 l~~~a~~~~Gld~~~~~~~~~~~~---~~~~v~~~~~~a----~~~gv~gtPt~ving~~~~~g~ 165 (195)
T 2znm_A 108 AGKWALSQKGFDGKKLMRAYDSPE---AAAAALKMQKLT----EQYRIDSTPTVIVGGKYRVIFN 165 (195)
T ss_dssp HHHHHHTCSSSCHHHHHHHHTSHH---HHHHHHHHHHHH----HHTTCCSSSEEEETTTEEECCC
T ss_pred HHHHHHHcCCCCHHHHHHHhcCHH---HHHHHHHHHHHH----HHcCCCCCCeEEECCEEEEcCC
Confidence 34567788 999999999998643 223344333322 12347889999999974 5554
No 163
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=36.32 E-value=15 Score=26.36 Aligned_cols=26 Identities=23% Similarity=0.537 Sum_probs=19.1
Q ss_pred ccce--ecCCceEEEccCCCCceeecCCccceeee
Q 008587 439 TACK--DTFRGRVCECPLVDGVQFKGDGYSHCEVS 471 (560)
Q Consensus 439 ~~C~--nt~gsy~C~C~~~~g~g~~gdg~~~C~di 471 (560)
+.|. ...+.+.|.|++ ||.|.. |+-.
T Consensus 19 G~C~~~~~~~~~~C~C~~----gy~G~R---Ce~~ 46 (50)
T 1iox_A 19 GRCRFVVAEQTPSCVCDE----GYIGAR---CERV 46 (50)
T ss_dssp CCEEEETTTTEEEECCCT----TEETTT---TCEE
T ss_pred CEEEeEcCCCCeEEECCC----CcccCC---CCee
Confidence 4554 445688999999 999875 7644
No 164
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=35.68 E-value=13 Score=35.65 Aligned_cols=59 Identities=15% Similarity=0.253 Sum_probs=39.2
Q ss_pred HHHHHHHcCCCHHHHccccCC-CCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCe-eecccccc
Q 008587 328 AAAVIKSLGLDAKKIEKCMGD-PDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNR-QYRGKLEK 393 (560)
Q Consensus 328 s~~v~~~~gi~~~~I~~C~~d-s~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~-~~rG~l~~ 393 (560)
-..+.+.+|+|.+++.+++.+ .. ....|+++.+.-. +..|.-.|+++|||. .+.|-...
T Consensus 141 L~~~a~~~Gld~~~~~~~l~s~~~---~~~~v~~~~~~a~----~~Gv~GvPtfvv~g~~~v~Ga~~~ 201 (239)
T 3gl5_A 141 LVELAVGAGLDAEEVRAVLADPAA---YADEVRADEREAA----QLGATGVPFFVLDRAYGVSGAQPA 201 (239)
T ss_dssp HHHHHHHTTCCHHHHHHHHHCTTT---THHHHHHHHHHHH----HTTCCSSSEEEETTTEEEESSCCH
T ss_pred HHHHHHHcCCCHHHHHHHHcCcHh---HHHHHHHHHHHHH----HCCCCeeCeEEECCcEeecCCCCH
Confidence 445667889999999999987 43 2233444433221 234888999999996 56676443
No 165
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=35.47 E-value=27 Score=25.08 Aligned_cols=22 Identities=23% Similarity=0.774 Sum_probs=17.1
Q ss_pred ccce--ecCCceEEEccCCCCceeecCC
Q 008587 439 TACK--DTFRGRVCECPLVDGVQFKGDG 464 (560)
Q Consensus 439 ~~C~--nt~gsy~C~C~~~~g~g~~gdg 464 (560)
..|. ...+.+.|.|++ ||.|+.
T Consensus 23 G~C~~i~~~~~~~C~C~~----gy~G~R 46 (50)
T 2rnl_A 23 GECKYIEHLEAVTCKCQQ----EYFGER 46 (50)
T ss_dssp SEEEEETTTTEEEEECCS----SCCSSS
T ss_pred CEEEEecCCCCeeEECCC----Cccccc
Confidence 4675 456688999999 999865
No 166
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=35.35 E-value=16 Score=33.38 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=35.9
Q ss_pred HhHHHHHHHc-CCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCee
Q 008587 326 ECAAAVIKSL-GLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ 386 (560)
Q Consensus 326 ~Cs~~v~~~~-gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~ 386 (560)
+=-..+.+.+ |+|.+++++|+.+.. ....+++..+.- .+..|.-.|+++|||..
T Consensus 101 ~~l~~~a~~~~Gld~~~~~~~~~s~~---~~~~v~~~~~~a----~~~gv~GtPt~~vng~~ 155 (189)
T 3l9v_A 101 DDVRRVFMSATGISRGEYDRSIKSPA---VNDMVALQERLF----KEYGVRGTPSVYVRGRY 155 (189)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHTTSHH---HHHHHHHHHHHH----HHTTCCSSSEEEETTTE
T ss_pred HHHHHHHHHccCCCHHHHHHHHhhHH---HHHHHHHHHHHH----HHhCCCccCEEEECCEE
Confidence 3345677788 999999999998653 223344333322 22347889999999863
No 167
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=34.44 E-value=25 Score=34.06 Aligned_cols=26 Identities=23% Similarity=0.712 Sum_probs=20.2
Q ss_pred ccceecCCceEEEccCCCCceee--cCCcccee
Q 008587 439 TACKDTFRGRVCECPLVDGVQFK--GDGYSHCE 469 (560)
Q Consensus 439 ~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~ 469 (560)
+.|.|+.+++.|.|.+ ||. .+... |.
T Consensus 136 ~~C~n~~g~~~C~C~~----Gy~l~~d~~~-C~ 163 (278)
T 3dem_A 136 HYCHNYIGGYYCSCRF----GYILHTDNRT-CR 163 (278)
T ss_dssp SEEEEETTEEEEECCT----TCEECTTSSC-EE
T ss_pred cCcCCccCCcEEEeCC----cceeccCCCC-Cc
Confidence 6699999999999999 555 45444 65
No 168
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=34.18 E-value=25 Score=29.96 Aligned_cols=27 Identities=30% Similarity=0.650 Sum_probs=17.9
Q ss_pred cccC---CCc-eeeCCCCcccCCCcccc-cCC-CCC
Q 008587 496 CLDS---ENG-KCQCPPGFKGDGVKSCI-LMN-AKR 525 (560)
Q Consensus 496 C~n~---gs~-~C~C~~Gf~~dg~~sC~-did-EC~ 525 (560)
|.+. ..+ .|.|++||.|.- |+ +++ +|.
T Consensus 9 C~~~~~~~~~~~C~Cp~g~~G~~---Ce~~~~~~C~ 41 (122)
T 2fd6_A 9 CVSNKYFSNIHWCNCPKKFGGQH---CEIDKSKTCY 41 (122)
T ss_dssp EEECTTTTTCEEEECCTTEESTT---SCEESSCCSB
T ss_pred cCCCcccCCCCCccCCCCCCCcc---ccccCcCCCc
Confidence 7664 345 899999998753 64 443 554
No 169
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=32.64 E-value=26 Score=41.94 Aligned_cols=33 Identities=27% Similarity=0.653 Sum_probs=27.0
Q ss_pred CCcCCCCCCCcccceecCCceEEEcc-CCCCceeecCC
Q 008587 428 GGCWQDKTANVTACKDTFRGRVCECP-LVDGVQFKGDG 464 (560)
Q Consensus 428 ~~C~~~~~~~~~~C~nt~gsy~C~C~-~~~g~g~~gdg 464 (560)
..|..++|.|.+.|.+...+|.|.|+ + +|.|..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~----g~~G~~ 1051 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMT----SFSGPL 1051 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTS----SCBSTT
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCC----CCCCCC
Confidence 44666777889999999999999999 7 777654
No 170
>4f87_A Plycb; lysin, bacteriophage, antimicrobial protein, viral protein; 1.40A {Streptococcus phage C1} PDB: 4f88_A
Probab=32.59 E-value=20 Score=26.34 Aligned_cols=21 Identities=43% Similarity=0.442 Sum_probs=19.1
Q ss_pred cceeEEEEcHHHHHHHHHHHh
Q 008587 152 ITIPSALIDKSFGETLKKALS 172 (560)
Q Consensus 152 i~IPsv~Is~~~G~~L~~~l~ 172 (560)
--||++-|+++|-++|+++++
T Consensus 51 qiipsinisksdveairkamk 71 (72)
T 4f87_A 51 QIIPSINISKSDVEAIRKAMK 71 (72)
T ss_dssp TTSCEEECCGGGHHHHHHHHC
T ss_pred HhCccccccHhHHHHHHHHhc
Confidence 368999999999999999986
No 171
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=31.64 E-value=28 Score=33.95 Aligned_cols=27 Identities=19% Similarity=0.583 Sum_probs=20.6
Q ss_pred cccceecCCceEEEccCCCCceee--cCCcccee
Q 008587 438 VTACKDTFRGRVCECPLVDGVQFK--GDGYSHCE 469 (560)
Q Consensus 438 ~~~C~nt~gsy~C~C~~~~g~g~~--gdg~~~C~ 469 (560)
.+.|.|+.|+|.|.|.+ ||. .++.. |.
T Consensus 134 ~~~C~n~~g~~~csC~~----Gy~L~~d~~~-C~ 162 (286)
T 1nt0_A 134 DHYCHXYLGGYYCSCRV----GYILHQNKHT-CS 162 (286)
T ss_dssp SSEEEEETTEEEEECCT----TEEECTTSSC-EE
T ss_pred CCccccccCceEeecCC----CceeccCCCC-cc
Confidence 36799999999999999 665 44444 64
No 172
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=30.57 E-value=21 Score=22.27 Aligned_cols=14 Identities=50% Similarity=1.559 Sum_probs=10.9
Q ss_pred ccccCCccCCCCCCC
Q 008587 257 QCINHGRYCAPDPEQ 271 (560)
Q Consensus 257 ~Ci~~GrYC~~dpd~ 271 (560)
.|+-+|.+| |||+.
T Consensus 2 ecvenggfc-pdpek 15 (32)
T 4b2v_A 2 ECVENGGFC-PDPEK 15 (32)
T ss_dssp CCCCTTCBC-CCTTT
T ss_pred chhhcCCcC-CChHH
Confidence 588899999 56754
No 173
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=29.04 E-value=25 Score=34.06 Aligned_cols=23 Identities=26% Similarity=0.660 Sum_probs=18.4
Q ss_pred cccC-CCceeeCCCCccc--CCCcccc
Q 008587 496 CLDS-ENGKCQCPPGFKG--DGVKSCI 519 (560)
Q Consensus 496 C~n~-gs~~C~C~~Gf~~--dg~~sC~ 519 (560)
|.|. +++.|.|++||.. +. ..|.
T Consensus 138 C~n~~g~~~C~C~~Gy~l~~d~-~~C~ 163 (278)
T 3dem_A 138 CHNYIGGYYCSCRFGYILHTDN-RTCR 163 (278)
T ss_dssp EEEETTEEEEECCTTCEECTTS-SCEE
T ss_pred cCCccCCcEEEeCCcceeccCC-CCCc
Confidence 9999 9999999999973 43 4465
No 174
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=27.17 E-value=32 Score=35.37 Aligned_cols=31 Identities=26% Similarity=0.786 Sum_probs=23.6
Q ss_pred CCccCCCCCCCCCCcCCCcccccccC-CCceeeCCC-CcccC
Q 008587 474 GKCKINNGGCWHESKDGHTYSACLDS-ENGKCQCPP-GFKGD 513 (560)
Q Consensus 474 ~eC~~~~~~C~~~~~~~~~~~~C~n~-gs~~C~C~~-Gf~~d 513 (560)
++|. ..+|.+... |.+. .+|.|.|+. ||.|.
T Consensus 186 ~~C~--~~pC~n~g~-------C~~~~~~~~C~C~~~~~~G~ 218 (410)
T 3asi_A 186 TTCQ--EDSCSNQGV-------CLQQWDGFSCDCSMTSFSGP 218 (410)
T ss_dssp SCCC--TTSSSTTCE-------EEECSSSEEEECTTTSEEST
T ss_pred CCcc--cccCCCCCE-------ecCCCCCceEeccCCcccCC
Confidence 5565 346776654 9999 999999996 99865
No 175
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=24.53 E-value=14 Score=33.28 Aligned_cols=48 Identities=17% Similarity=0.350 Sum_probs=31.6
Q ss_pred HHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCee
Q 008587 332 IKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQ 386 (560)
Q Consensus 332 ~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~ 386 (560)
.+.+|+|.+++++|+.+... ...+++..+. ..+.+|.-.|+++|||..
T Consensus 125 a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~----a~~~gv~gtPt~~ing~~ 172 (195)
T 3c7m_A 125 LDAAGMSQADFEAALKEPAV---QETLEKWKAS----YDVAKIQGVPAYVVNGKY 172 (195)
T ss_dssp HHHHTCCHHHHHHHHTSHHH---HHHHHHGGGH----HHHHHHHCSSEEEETTTE
T ss_pred HHHcCCCHHHHHHHHcChHH---HHHHHHHHHH----HHHcCCCccCEEEECCEE
Confidence 78889999999999975421 1223322221 122347889999999864
No 176
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=24.42 E-value=53 Score=35.36 Aligned_cols=28 Identities=25% Similarity=0.637 Sum_probs=22.4
Q ss_pred CcccceecC-CceEEEccCCCCceeecCCcccee
Q 008587 437 NVTACKDTF-RGRVCECPLVDGVQFKGDGYSHCE 469 (560)
Q Consensus 437 ~~~~C~nt~-gsy~C~C~~~~g~g~~gdg~~~C~ 469 (560)
.++.|+.+. +.|.|.|+. ||.|.|.. |-
T Consensus 31 ~~a~C~~~~~~~~~c~C~~----G~ag~G~~-c~ 59 (551)
T 3fby_A 31 EHADCVLERDGSRSCVCAV----GWAGNGIL-CG 59 (551)
T ss_dssp TTEEEEECTTSCEEEEECT----TEESSSSS-CE
T ss_pred CCCeeEeCCCCCEecCCCC----CCCCCCcc-cC
Confidence 358888774 578999999 99998877 74
No 177
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=22.64 E-value=49 Score=30.59 Aligned_cols=14 Identities=43% Similarity=1.130 Sum_probs=11.8
Q ss_pred CceeeCCCCcccCC
Q 008587 501 NGKCQCPPGFKGDG 514 (560)
Q Consensus 501 s~~C~C~~Gf~~dg 514 (560)
...|.|++||.|.-
T Consensus 164 P~~C~C~~Gw~G~~ 177 (188)
T 2ygo_A 164 RRICECPDGFHGPH 177 (188)
T ss_dssp TSCEECCTTCBTTT
T ss_pred CCcccCcCCCCCCC
Confidence 57899999999763
No 178
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=21.80 E-value=41 Score=40.12 Aligned_cols=33 Identities=24% Similarity=0.653 Sum_probs=26.2
Q ss_pred CCcCCCCCCCcccceecCCceEEEcc-CCCCceeecCC
Q 008587 428 GGCWQDKTANVTACKDTFRGRVCECP-LVDGVQFKGDG 464 (560)
Q Consensus 428 ~~C~~~~~~~~~~C~nt~gsy~C~C~-~~~g~g~~gdg 464 (560)
..|..++|.+.+.|.+...+|.|.|+ + ||.|..
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~----g~~G~~ 653 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGT----GYLGRS 653 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTT----TEESTT
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCC----Cccccc
Confidence 34556677888999999999999999 7 777654
No 179
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=21.47 E-value=35 Score=31.39 Aligned_cols=52 Identities=12% Similarity=0.218 Sum_probs=33.8
Q ss_pred HHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEEcCeee
Q 008587 329 AAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVVNNRQY 387 (560)
Q Consensus 329 ~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~IN~~~~ 387 (560)
..+.+.+|+|.+++++|+.+.. ....+++....- .+..|.-.|+++||+..+
T Consensus 10 ~~~a~~~Gld~~~~~~~l~s~~---~~~~v~~~~~~a----~~~gi~gvP~fvingk~~ 61 (197)
T 1un2_A 10 RDVFINAGIKGEEYDAAWNSFV---VKSLVAQQEKAA----ADVQLRGVPAMFVNGKYQ 61 (197)
T ss_dssp HHHHHHHTCCHHHHHHHHTSHH---HHHHHHHHHHHH----HHTTCCSSSEEEETTTEE
T ss_pred HHHHHHcCCCHHHHHHHHhCHH---HHHHHHHHHHHH----HHcCCCcCCEEEEcceEe
Confidence 3467788999999999997643 223444443321 112366799999998744
No 180
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=20.59 E-value=37 Score=31.07 Aligned_cols=55 Identities=15% Similarity=0.215 Sum_probs=34.7
Q ss_pred HHHHHHcCCCHHHHccccCCCCCCCCchhhHHHHHHHcCCCCccceEecceeEE--cCee---eccc
Q 008587 329 AAVIKSLGLDAKKIEKCMGDPDADADNPVLKEEQDAQVGKGSRGDVTILPTLVV--NNRQ---YRGK 390 (560)
Q Consensus 329 ~~v~~~~gi~~~~I~~C~~ds~~~~~N~iLe~e~~~q~~~~~~~~v~~~P~l~I--N~~~---~rG~ 390 (560)
..+.+.+|+|.+++.+|+.+... ...+++..+.- .+..|.-.|+++| ||.. +.|-
T Consensus 136 ~~~a~~~Gld~~~~~~~~~~~~~---~~~v~~~~~~a----~~~gv~g~Pt~~i~~~G~~~~~~~G~ 195 (216)
T 2in3_A 136 KKLAVDLGIPESRFTPVFQSDEA---KQRTLAGFQRV----AQWGISGFPALVVESGTDRYLITTGY 195 (216)
T ss_dssp HHHHHHTTCCHHHHHHHHHSHHH---HHHHHHHHHHH----HHTTCCSSSEEEEEETTEEEEEESSC
T ss_pred HHHHHHcCCCHHHHHHHhcchHH---HHHHHHHHHHH----HHcCCcccceEEEEECCEEEEeccCC
Confidence 45667789999999999975421 12233332221 1234888999988 8874 4454
No 181
>1hx2_A BSTI; beta-sheet disulfide-rich, hydrolase inhibitor; NMR {Bombina bombina} SCOP: g.22.1.2
Probab=20.49 E-value=1.3e+02 Score=21.90 Aligned_cols=23 Identities=22% Similarity=0.603 Sum_probs=15.4
Q ss_pred ceeeCCCC--cccCCCcccccCCCC
Q 008587 502 GKCQCPPG--FKGDGVKSCILMNAK 524 (560)
Q Consensus 502 ~~C~C~~G--f~~dg~~sC~didEC 524 (560)
..|.|++| |..++...|....+|
T Consensus 36 ~GC~C~~Gtv~v~~~~~~CV~~~~C 60 (60)
T 1hx2_A 36 QRCGCISGTVLKSKDSSECVHPSKC 60 (60)
T ss_dssp SEEEECTTCEESSTTCSSEECTTTC
T ss_pred CCCCCCCCCeeEECCCCCEechhhC
Confidence 36999999 765421348777665
Done!