Query 008588
Match_columns 560
No_of_seqs 369 out of 2326
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 14:03:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008588.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008588hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02418 delta-1-pyrroline-5-c 100.0 6E-111 1E-115 944.8 59.5 555 1-560 151-718 (718)
2 TIGR01092 P5CS delta l-pyrroli 100.0 3E-107 5E-112 917.0 59.1 553 1-558 143-710 (715)
3 PRK00197 proA gamma-glutamyl p 100.0 4E-88 8.6E-93 722.1 44.0 407 136-543 4-416 (417)
4 cd07079 ALDH_F18-19_ProA-GPR G 100.0 2.2E-86 4.8E-91 706.4 42.3 398 140-538 2-405 (406)
5 KOG2450 Aldehyde dehydrogenase 100.0 2.1E-85 4.5E-90 678.9 30.1 398 114-540 42-497 (501)
6 KOG2451 Aldehyde dehydrogenase 100.0 5.5E-84 1.2E-88 639.7 32.0 399 112-539 43-499 (503)
7 COG1012 PutA NAD-dependent ald 100.0 4.9E-82 1.1E-86 681.1 38.5 397 113-540 19-470 (472)
8 TIGR00407 proA gamma-glutamyl 100.0 3.7E-81 8.1E-86 661.5 39.2 388 145-533 1-398 (398)
9 PRK11241 gabD succinate-semial 100.0 1.2E-80 2.7E-85 674.9 39.7 398 112-538 30-481 (482)
10 PLN02419 methylmalonate-semial 100.0 3.8E-80 8.2E-85 677.9 39.0 402 111-540 132-591 (604)
11 PLN02174 aldehyde dehydrogenas 100.0 1.4E-79 3E-84 662.7 39.0 386 135-539 9-445 (484)
12 TIGR03374 ABALDH 1-pyrroline d 100.0 8.8E-79 1.9E-83 659.8 38.8 398 112-537 20-471 (472)
13 PLN02315 aldehyde dehydrogenas 100.0 2.3E-78 4.9E-83 660.1 38.8 404 111-539 37-495 (508)
14 PLN02766 coniferyl-aldehyde de 100.0 6.6E-78 1.4E-82 657.0 38.6 399 112-539 40-495 (501)
15 cd07130 ALDH_F7_AASADH NAD+-de 100.0 9.1E-78 2E-82 653.4 39.0 403 112-539 16-473 (474)
16 PRK09406 gabD1 succinic semial 100.0 1.3E-77 2.8E-82 648.6 39.9 398 113-537 6-456 (457)
17 PLN02278 succinic semialdehyde 100.0 1.5E-77 3.3E-82 654.1 40.3 399 111-538 43-495 (498)
18 PRK13968 putative succinate se 100.0 1.6E-77 3.4E-82 648.8 39.5 396 112-538 11-460 (462)
19 cd07113 ALDH_PADH_NahF Escheri 100.0 1.8E-77 3.9E-82 651.9 38.6 401 112-538 19-476 (477)
20 cd07559 ALDH_ACDHII_AcoD-like 100.0 2.2E-77 4.8E-82 651.0 38.7 399 112-539 20-480 (480)
21 cd07086 ALDH_F7_AASADH-like NA 100.0 3.3E-77 7.2E-82 650.0 40.0 403 112-539 17-477 (478)
22 PLN02466 aldehyde dehydrogenas 100.0 2.6E-77 5.6E-82 655.3 38.1 399 112-539 77-532 (538)
23 cd07116 ALDH_ACDHII-AcoD Ralst 100.0 5.6E-77 1.2E-81 648.3 40.3 398 112-539 20-479 (479)
24 cd07117 ALDH_StaphAldA1 Unchar 100.0 5E-77 1.1E-81 647.0 39.4 398 112-538 20-474 (475)
25 cd07140 ALDH_F1L_FTFDH 10-form 100.0 6.1E-77 1.3E-81 647.1 38.7 401 112-538 25-485 (486)
26 PRK13252 betaine aldehyde dehy 100.0 7.9E-77 1.7E-81 648.6 39.6 399 112-539 26-481 (488)
27 TIGR03216 OH_muco_semi_DH 2-hy 100.0 8.5E-77 1.8E-81 647.2 39.2 401 112-538 18-480 (481)
28 cd07107 ALDH_PhdK-like Nocardi 100.0 1.3E-76 2.9E-81 642.2 40.4 395 114-538 3-455 (456)
29 cd07142 ALDH_F2BC Arabidosis a 100.0 1.1E-76 2.3E-81 645.6 37.7 396 112-536 23-475 (476)
30 cd07148 ALDH_RL0313 Uncharacte 100.0 2.4E-76 5.3E-81 639.4 39.3 398 113-537 4-455 (455)
31 cd07085 ALDH_F6_MMSDH Methylma 100.0 3.6E-76 7.7E-81 642.2 39.8 400 112-538 20-477 (478)
32 TIGR01780 SSADH succinate-semi 100.0 1.9E-76 4.1E-81 639.4 37.1 391 114-533 3-448 (448)
33 cd07106 ALDH_AldA-AAD23400 Str 100.0 4.9E-76 1.1E-80 636.3 40.0 392 114-536 3-445 (446)
34 PRK13473 gamma-aminobutyraldeh 100.0 3.1E-76 6.7E-81 642.5 38.3 401 111-539 20-474 (475)
35 cd07090 ALDH_F9_TMBADH NAD+-de 100.0 6E-76 1.3E-80 637.5 38.7 397 114-540 3-457 (457)
36 TIGR02299 HpaE 5-carboxymethyl 100.0 7.2E-76 1.6E-80 641.3 39.4 397 112-539 20-478 (488)
37 PTZ00381 aldehyde dehydrogenas 100.0 4.8E-76 1E-80 639.6 37.8 387 134-539 5-439 (493)
38 PLN02467 betaine aldehyde dehy 100.0 4.9E-76 1.1E-80 642.0 38.0 400 113-539 28-489 (503)
39 cd07151 ALDH_HBenzADH NADP+-de 100.0 9.4E-76 2E-80 636.8 39.6 397 113-538 15-464 (465)
40 cd07097 ALDH_KGSADH-YcbD Bacil 100.0 1.4E-75 3.1E-80 636.7 39.2 399 111-537 17-473 (473)
41 cd07152 ALDH_BenzADH NAD-depen 100.0 2E-75 4.4E-80 631.0 39.4 391 118-537 1-443 (443)
42 cd07110 ALDH_F10_BADH Arabidop 100.0 2.4E-75 5.2E-80 632.6 39.4 394 114-536 3-455 (456)
43 cd07144 ALDH_ALD2-YMR170C Sacc 100.0 2.7E-75 5.9E-80 636.2 39.4 397 113-538 28-483 (484)
44 cd07143 ALDH_AldA_AN0554 Asper 100.0 2.5E-75 5.3E-80 634.7 38.7 397 113-538 27-480 (481)
45 cd07145 ALDH_LactADH_F420-Bios 100.0 3.5E-75 7.7E-80 631.3 39.3 398 113-537 4-456 (456)
46 cd07147 ALDH_F21_RNP123 Aldehy 100.0 4.2E-75 9.2E-80 630.2 39.6 398 113-537 4-452 (452)
47 PLN02203 aldehyde dehydrogenas 100.0 4.1E-75 8.9E-80 629.8 39.4 386 135-539 5-444 (484)
48 PLN00412 NADP-dependent glycer 100.0 5.4E-75 1.2E-79 633.8 40.5 401 111-539 34-488 (496)
49 cd07101 ALDH_SSADH2_GabD2 Myco 100.0 4.3E-75 9.3E-80 630.1 38.6 395 114-537 2-454 (454)
50 cd07109 ALDH_AAS00426 Uncharac 100.0 5E-75 1.1E-79 629.8 38.8 393 114-536 3-453 (454)
51 cd07141 ALDH_F1AB_F2_RALDH1 NA 100.0 4.5E-75 9.8E-80 633.7 38.5 396 113-537 27-480 (481)
52 cd07115 ALDH_HMSADH_HapE Pseud 100.0 6.6E-75 1.4E-79 628.7 39.3 396 114-538 3-452 (453)
53 cd07150 ALDH_VaniDH_like Pseud 100.0 6.3E-75 1.4E-79 628.9 39.1 396 113-537 4-451 (451)
54 cd07120 ALDH_PsfA-ACA09737 Pse 100.0 3.5E-75 7.6E-80 629.3 36.8 394 114-537 3-455 (455)
55 cd07089 ALDH_CddD-AldA-like Rh 100.0 8E-75 1.7E-79 628.3 38.6 398 114-537 3-459 (459)
56 cd07094 ALDH_F21_LactADH-like 100.0 1.3E-74 2.7E-79 626.7 40.1 398 113-537 4-453 (453)
57 cd07124 ALDH_PutA-P5CDH-RocA D 100.0 1.9E-74 4.2E-79 632.6 41.8 428 82-539 12-512 (512)
58 TIGR01804 BADH glycine betaine 100.0 4.4E-75 9.5E-80 632.1 36.2 393 112-533 17-467 (467)
59 cd07118 ALDH_SNDH Gluconobacte 100.0 8.8E-75 1.9E-79 627.1 37.5 394 114-536 3-453 (454)
60 cd07119 ALDH_BADH-GbsA Bacillu 100.0 9.1E-75 2E-79 632.0 37.8 397 113-539 18-474 (482)
61 TIGR03250 PhnAcAld_DH putative 100.0 2E-74 4.3E-79 626.5 39.2 397 113-538 22-471 (472)
62 TIGR01237 D1pyr5carbox2 delta- 100.0 2.6E-74 5.6E-79 631.0 40.4 398 113-538 51-510 (511)
63 cd07091 ALDH_F1-2_Ald2-like AL 100.0 1.3E-74 2.7E-79 630.0 37.4 397 112-537 23-476 (476)
64 PRK09457 astD succinylglutamic 100.0 4.5E-74 9.8E-79 626.0 40.9 397 112-539 19-471 (487)
65 cd07131 ALDH_AldH-CAJ73105 Unc 100.0 3.8E-74 8.2E-79 626.8 40.3 399 113-539 19-477 (478)
66 cd07098 ALDH_F15-22 Aldehyde d 100.0 3.7E-74 8.1E-79 624.8 39.6 403 114-538 2-464 (465)
67 cd07088 ALDH_LactADH-AldA Esch 100.0 3.2E-74 7E-79 626.0 39.1 397 112-537 17-468 (468)
68 cd07108 ALDH_MGR_2402 Magnetos 100.0 3.8E-74 8.2E-79 623.4 39.4 395 114-537 3-457 (457)
69 cd07123 ALDH_F4-17_P5CDH Delta 100.0 3.3E-74 7.1E-79 630.8 39.0 400 111-538 49-519 (522)
70 cd07136 ALDH_YwdH-P39616 Bacil 100.0 2.2E-74 4.9E-79 619.8 36.9 380 140-540 2-429 (449)
71 PRK03137 1-pyrroline-5-carboxy 100.0 7.9E-74 1.7E-78 627.6 41.8 398 111-537 53-512 (514)
72 TIGR01236 D1pyr5carbox1 delta- 100.0 3E-74 6.6E-79 631.0 38.4 400 112-539 50-521 (533)
73 cd07100 ALDH_SSADH1_GabD1 Myco 100.0 2.8E-74 6.1E-79 619.2 37.3 374 138-536 1-428 (429)
74 cd07138 ALDH_CddD_SSP0762 Rhod 100.0 3.9E-74 8.5E-79 624.5 38.6 392 112-536 18-465 (466)
75 PRK09847 gamma-glutamyl-gamma- 100.0 3.1E-74 6.7E-79 627.6 37.7 398 112-538 39-492 (494)
76 PRK09407 gabD2 succinic semial 100.0 6.8E-74 1.5E-78 629.1 39.9 398 114-540 38-493 (524)
77 cd07102 ALDH_EDX86601 Uncharac 100.0 8.7E-74 1.9E-78 620.2 39.6 394 114-536 2-451 (452)
78 cd07083 ALDH_P5CDH ALDH subfam 100.0 1.3E-73 2.8E-78 624.3 40.2 399 113-538 37-499 (500)
79 TIGR01722 MMSDH methylmalonic 100.0 1.3E-73 2.8E-78 621.6 39.5 400 111-538 19-476 (477)
80 cd07125 ALDH_PutA-P5CDH Delta( 100.0 2.2E-73 4.8E-78 624.6 41.3 401 111-540 49-509 (518)
81 TIGR03240 arg_catab_astD succi 100.0 2.2E-73 4.7E-78 620.6 40.8 397 112-539 17-469 (484)
82 cd07139 ALDH_AldA-Rv0768 Mycob 100.0 1.1E-73 2.3E-78 622.2 37.4 394 113-536 19-470 (471)
83 cd07092 ALDH_ABALDH-YdcW Esche 100.0 1.7E-73 3.7E-78 617.6 38.7 395 114-536 3-449 (450)
84 cd07112 ALDH_GABALDH-PuuC Esch 100.0 1.4E-73 3E-78 619.0 37.3 396 113-537 7-462 (462)
85 cd07099 ALDH_DDALDH Methylomon 100.0 2.4E-73 5.3E-78 616.8 39.1 395 114-536 2-452 (453)
86 cd07135 ALDH_F14-YMR110C Sacch 100.0 1.9E-73 4.1E-78 612.4 36.5 383 135-536 4-435 (436)
87 cd07137 ALDH_F3FHI Plant aldeh 100.0 2E-73 4.3E-78 611.4 36.5 375 140-537 3-432 (432)
88 cd07111 ALDH_F16 Aldehyde dehy 100.0 1.4E-73 3.1E-78 619.8 35.6 385 112-534 41-477 (480)
89 PF00171 Aldedh: Aldehyde dehy 100.0 6.3E-74 1.4E-78 622.5 32.4 394 112-535 11-462 (462)
90 cd07121 ALDH_EutE Ethanolamine 100.0 1.9E-73 4.1E-78 609.8 35.4 371 136-537 4-422 (429)
91 cd07132 ALDH_F3AB Aldehyde deh 100.0 3.2E-73 7E-78 612.1 37.1 381 140-540 2-429 (443)
92 cd07105 ALDH_SaliADH Salicylal 100.0 4E-73 8.6E-78 611.0 37.5 378 137-537 1-432 (432)
93 cd07146 ALDH_PhpJ Streptomyces 100.0 6.8E-73 1.5E-77 611.6 38.9 396 113-537 4-451 (451)
94 cd07133 ALDH_CALDH_CalB Conife 100.0 4.7E-73 1E-77 609.7 36.9 377 140-536 2-433 (434)
95 cd07114 ALDH_DhaS Uncharacteri 100.0 5.7E-73 1.2E-77 614.2 37.4 395 114-537 3-457 (457)
96 cd07149 ALDH_y4uC Uncharacteri 100.0 2.6E-72 5.7E-77 609.0 39.9 397 113-536 4-452 (453)
97 cd07095 ALDH_SGSD_AstD N-succi 100.0 1E-72 2.2E-77 606.5 35.3 374 137-535 1-429 (431)
98 PRK15398 aldehyde dehydrogenas 100.0 2.2E-72 4.8E-77 606.2 37.0 378 134-539 34-454 (465)
99 cd07093 ALDH_F8_HMSADH Human a 100.0 3.5E-72 7.7E-77 608.1 38.5 395 114-537 3-455 (455)
100 cd07082 ALDH_F11_NP-GAPDH NADP 100.0 4.8E-72 1E-76 609.5 39.2 400 111-537 19-472 (473)
101 cd07126 ALDH_F12_P5CDH Delta(1 100.0 4.8E-72 1E-76 605.4 38.8 379 113-515 17-470 (489)
102 cd07104 ALDH_BenzADH-like ALDH 100.0 5.5E-72 1.2E-76 602.8 38.6 378 137-537 1-431 (431)
103 cd07103 ALDH_F5_SSADH_GabD Mit 100.0 4.9E-72 1.1E-76 606.4 38.2 394 114-536 3-450 (451)
104 TIGR01238 D1pyr5carbox3 delta- 100.0 5.9E-72 1.3E-76 609.1 36.4 385 111-534 54-500 (500)
105 cd07128 ALDH_MaoC-N N-terminal 100.0 6.9E-72 1.5E-76 608.6 35.7 392 113-536 20-502 (513)
106 TIGR02278 PaaN-DH phenylacetic 100.0 1.2E-71 2.6E-76 622.9 38.4 396 112-538 19-496 (663)
107 cd07081 ALDH_F20_ACDH_EutE-lik 100.0 5.9E-71 1.3E-75 590.7 37.9 381 138-537 1-438 (439)
108 PRK11903 aldehyde dehydrogenas 100.0 6.4E-71 1.4E-75 602.7 36.5 397 113-538 24-507 (521)
109 cd07134 ALDH_AlkH-like Pseudom 100.0 1.1E-70 2.4E-75 591.1 36.6 378 140-536 2-432 (433)
110 PRK11904 bifunctional proline 100.0 2.2E-70 4.8E-75 633.2 41.7 428 85-540 536-1028(1038)
111 cd07087 ALDH_F3-13-14_CALDH-li 100.0 1.2E-70 2.6E-75 590.3 36.5 376 140-536 2-425 (426)
112 PRK10090 aldehyde dehydrogenas 100.0 1.1E-70 2.3E-75 585.6 32.8 353 164-539 1-408 (409)
113 TIGR02518 EutH_ACDH acetaldehy 100.0 1.1E-69 2.3E-74 588.6 40.6 382 135-539 7-445 (488)
114 PRK11563 bifunctional aldehyde 100.0 2.2E-70 4.9E-75 616.2 36.0 395 113-538 24-508 (675)
115 KOG2456 Aldehyde dehydrogenase 100.0 1.8E-70 3.9E-75 548.4 30.3 382 138-539 4-433 (477)
116 cd07077 ALDH-like NAD(P)+-depe 100.0 5.2E-69 1.1E-73 572.8 40.7 382 143-536 1-396 (397)
117 cd07129 ALDH_KGSADH Alpha-Keto 100.0 1.6E-69 3.5E-74 585.4 36.0 380 138-532 1-449 (454)
118 cd07122 ALDH_F20_ACDH Coenzyme 100.0 7.7E-69 1.7E-73 573.3 37.5 376 138-537 1-435 (436)
119 PRK11809 putA trifunctional tr 100.0 8.6E-69 1.9E-73 624.8 35.9 385 111-534 662-1111(1318)
120 cd07084 ALDH_KGSADH-like ALDH 100.0 2.9E-68 6.3E-73 573.5 36.8 377 139-535 2-440 (442)
121 PRK11905 bifunctional proline 100.0 1E-67 2.2E-72 617.3 39.5 389 112-539 571-1019(1208)
122 TIGR02288 PaaN_2 phenylacetic 100.0 2E-67 4.4E-72 573.4 37.8 364 114-499 71-516 (551)
123 PRK13805 bifunctional acetalde 100.0 9.3E-67 2E-71 602.2 40.0 387 134-543 10-455 (862)
124 KOG2454 Betaine aldehyde dehyd 100.0 1.2E-65 2.6E-70 508.4 22.1 418 115-553 71-548 (583)
125 cd07127 ALDH_PAD-PaaZ Phenylac 100.0 2.3E-63 5E-68 542.8 38.0 392 135-537 83-545 (549)
126 cd07078 ALDH NAD(P)+ dependent 100.0 5.8E-63 1.3E-67 532.9 37.1 375 139-536 1-431 (432)
127 cd06534 ALDH-SF NAD(P)+-depend 100.0 4.3E-61 9.3E-66 507.7 35.5 355 144-536 2-366 (367)
128 COG0014 ProA Gamma-glutamyl ph 100.0 4.6E-60 9.9E-65 477.5 35.4 408 136-544 3-417 (417)
129 KOG2452 Formyltetrahydrofolate 100.0 4.6E-59 1E-63 470.5 22.4 366 134-539 457-881 (881)
130 COG4230 Delta 1-pyrroline-5-ca 100.0 2E-56 4.3E-61 460.6 25.0 388 107-534 126-574 (769)
131 KOG2453 Aldehyde dehydrogenase 100.0 4.3E-53 9.3E-58 412.4 14.9 388 135-541 54-496 (507)
132 KOG4165 Gamma-glutamyl phospha 100.0 2.7E-49 5.8E-54 385.7 34.3 421 138-559 2-429 (433)
133 KOG2455 Delta-1-pyrroline-5-ca 100.0 1.7E-46 3.7E-51 377.9 23.6 379 135-535 95-544 (561)
134 cd07080 ALDH_Acyl-CoA-Red_LuxC 100.0 5.1E-31 1.1E-35 282.4 24.3 318 137-490 25-390 (422)
135 COG0263 ProB Glutamate 5-kinas 99.9 4E-26 8.6E-31 228.8 12.0 126 1-128 132-260 (369)
136 cd04256 AAK_P5CS_ProBA AAK_P5C 99.9 1.8E-23 3.9E-28 211.8 11.3 124 1-125 152-283 (284)
137 PRK13402 gamma-glutamyl kinase 99.9 2.6E-23 5.7E-28 217.0 11.2 125 1-128 130-258 (368)
138 COG1608 Predicted archaeal kin 99.9 3.6E-23 7.7E-28 197.4 9.3 122 1-126 129-251 (252)
139 PTZ00489 glutamate 5-kinase; P 99.9 8.3E-23 1.8E-27 204.4 11.5 125 1-128 130-260 (264)
140 PRK12314 gamma-glutamyl kinase 99.9 1.2E-22 2.5E-27 204.6 12.5 127 1-128 135-265 (266)
141 TIGR01027 proB glutamate 5-kin 99.9 1.4E-22 3.1E-27 212.3 11.7 126 1-128 126-254 (363)
142 cd04242 AAK_G5K_ProB AAK_G5K_P 99.9 4.6E-22 9.9E-27 199.2 11.7 122 1-125 125-250 (251)
143 PRK05429 gamma-glutamyl kinase 99.9 4.6E-22 9.9E-27 209.3 12.0 125 1-128 134-262 (372)
144 cd04241 AAK_FomA-like AAK_FomA 99.9 6.1E-22 1.3E-26 198.6 10.9 123 1-125 129-252 (252)
145 KOG1154 Gamma-glutamyl kinase 99.8 2.5E-21 5.5E-26 182.6 7.7 130 1-131 147-279 (285)
146 TIGR02076 pyrH_arch uridylate 99.8 5.2E-19 1.1E-23 173.9 10.3 114 1-125 105-220 (221)
147 cd04253 AAK_UMPK-PyrH-Pf AAK_U 99.8 2.2E-18 4.8E-23 169.3 10.8 114 1-125 105-220 (221)
148 PRK14058 acetylglutamate/acety 99.8 2.7E-18 5.8E-23 173.5 10.5 116 1-127 151-267 (268)
149 PRK12353 putative amino acid k 99.7 2.6E-18 5.6E-23 176.5 9.5 119 1-127 187-314 (314)
150 cd04255 AAK_UMPK-MosAB AAK_UMP 99.7 2.4E-18 5.2E-23 172.4 9.0 118 1-125 137-261 (262)
151 PRK12686 carbamate kinase; Rev 99.7 3E-18 6.4E-23 174.0 9.7 118 1-126 185-311 (312)
152 PRK14558 pyrH uridylate kinase 99.7 3.7E-18 8.1E-23 168.9 9.7 110 1-127 120-230 (231)
153 PRK00358 pyrH uridylate kinase 99.7 6.6E-18 1.4E-22 167.2 10.1 108 1-125 122-230 (231)
154 cd04239 AAK_UMPK-like AAK_UMPK 99.7 5.8E-18 1.3E-22 167.3 9.6 108 1-125 120-228 (229)
155 cd04250 AAK_NAGK-C AAK_NAGK-C: 99.7 6.6E-18 1.4E-22 171.7 10.1 117 1-125 160-279 (279)
156 cd02115 AAK Amino Acid Kinases 99.7 4.7E-18 1E-22 169.8 7.3 116 1-125 130-248 (248)
157 CHL00202 argB acetylglutamate 99.7 1.8E-17 3.8E-22 168.7 11.1 118 1-126 163-283 (284)
158 PRK14556 pyrH uridylate kinase 99.7 2.1E-17 4.4E-22 162.7 10.9 111 6-127 136-248 (249)
159 PLN02512 acetylglutamate kinas 99.7 3.6E-17 7.8E-22 168.2 11.1 118 1-126 188-308 (309)
160 cd04235 AAK_CK AAK_CK: Carbama 99.7 2.2E-17 4.7E-22 167.6 9.0 117 1-125 183-307 (308)
161 TIGR00746 arcC carbamate kinas 99.7 3.1E-17 6.8E-22 167.3 10.1 116 1-126 193-309 (310)
162 PRK00942 acetylglutamate kinas 99.7 4.3E-17 9.3E-22 166.2 11.1 117 1-127 164-282 (283)
163 cd04238 AAK_NAGK-like AAK_NAGK 99.7 4.1E-17 8.9E-22 164.0 9.4 115 1-125 140-256 (256)
164 cd04254 AAK_UMPK-PyrH-Ec UMP k 99.7 1.3E-16 2.9E-21 157.8 10.6 109 1-126 122-231 (231)
165 PRK14557 pyrH uridylate kinase 99.7 2E-16 4.4E-21 157.2 10.8 113 6-129 125-240 (247)
166 PRK12454 carbamate kinase-like 99.7 1.8E-16 3.9E-21 160.6 10.3 118 1-126 187-312 (313)
167 COG0528 PyrH Uridylate kinase 99.7 1.5E-16 3.3E-21 152.4 9.0 110 6-126 125-237 (238)
168 PRK12354 carbamate kinase; Rev 99.7 1.6E-16 3.4E-21 160.6 9.2 114 1-128 186-301 (307)
169 cd04249 AAK_NAGK-NC AAK_NAGK-N 99.7 1.7E-16 3.7E-21 159.1 9.3 114 1-125 138-252 (252)
170 TIGR02075 pyrH_bact uridylate 99.7 3.6E-16 7.8E-21 154.8 10.3 102 14-126 130-233 (233)
171 cd04246 AAK_AK-DapG-like AAK_A 99.6 3E-16 6.6E-21 156.1 8.7 102 1-110 128-233 (239)
172 cd04261 AAK_AKii-LysC-BS AAK_A 99.6 3.8E-16 8.3E-21 155.3 8.8 102 1-110 128-233 (239)
173 PF00696 AA_kinase: Amino acid 99.6 5.4E-16 1.2E-20 154.4 9.3 101 1-105 136-242 (242)
174 cd04234 AAK_AK AAK_AK: Amino A 99.6 5.4E-16 1.2E-20 153.0 9.2 102 1-111 115-221 (227)
175 cd04251 AAK_NAGK-UC AAK_NAGK-U 99.6 5.2E-16 1.1E-20 155.9 8.7 109 1-124 147-256 (257)
176 COG0548 ArgB Acetylglutamate k 99.6 2.2E-15 4.7E-20 148.8 10.9 117 1-126 145-264 (265)
177 PRK12352 putative carbamate ki 99.6 4.3E-15 9.3E-20 151.9 10.9 117 1-127 197-315 (316)
178 PRK05279 N-acetylglutamate syn 99.6 5.2E-15 1.1E-19 160.2 11.7 121 1-128 170-292 (441)
179 cd04260 AAK_AKi-DapG-BS AAK_AK 99.6 3.5E-15 7.5E-20 148.8 8.8 102 1-110 133-238 (244)
180 PRK09411 carbamate kinase; Rev 99.6 4.2E-15 9E-20 149.1 9.2 109 1-126 187-296 (297)
181 TIGR00761 argB acetylglutamate 99.6 4.2E-15 9.1E-20 147.1 8.7 93 1-102 137-229 (231)
182 cd04237 AAK_NAGS-ABP AAK_NAGS- 99.5 1.8E-14 3.9E-19 146.3 10.4 114 2-125 164-280 (280)
183 cd04259 AAK_AK-DapDC AAK_AK-Da 99.5 2.1E-14 4.6E-19 146.3 10.0 101 1-110 183-288 (295)
184 TIGR02078 AspKin_pair Pyrococc 99.5 8.7E-14 1.9E-18 143.2 10.4 98 1-109 159-262 (327)
185 cd04244 AAK_AK-LysC-like AAK_A 99.5 7E-14 1.5E-18 143.0 9.2 101 1-110 186-291 (298)
186 PRK08841 aspartate kinase; Val 99.5 1.2E-13 2.5E-18 146.6 9.5 100 1-109 130-234 (392)
187 cd04252 AAK_NAGK-fArgBP AAK_NA 99.5 1.4E-13 3.1E-18 137.5 9.6 112 1-125 132-248 (248)
188 PRK05925 aspartate kinase; Pro 99.5 1.6E-13 3.5E-18 147.2 10.1 110 1-128 167-281 (440)
189 PRK06635 aspartate kinase; Rev 99.5 1.4E-13 3E-18 147.5 9.2 110 1-128 130-243 (404)
190 cd04243 AAK_AK-HSDH-like AAK_A 99.5 2E-13 4.2E-18 139.2 9.7 101 1-110 181-286 (293)
191 TIGR01890 N-Ac-Glu-synth amino 99.4 7.4E-13 1.6E-17 142.8 13.4 115 3-128 163-280 (429)
192 TIGR00656 asp_kin_monofn aspar 99.4 2.7E-13 5.9E-18 145.1 9.8 109 1-128 131-244 (401)
193 cd04236 AAK_NAGS-Urea AAK_NAGS 99.4 1.8E-13 4E-18 137.2 7.9 111 1-125 155-271 (271)
194 PRK06291 aspartate kinase; Pro 99.4 3.2E-13 6.9E-18 146.9 9.7 110 1-128 190-304 (465)
195 cd04257 AAK_AK-HSDH AAK_AK-HSD 99.4 2.9E-13 6.2E-18 138.1 8.6 101 1-110 182-287 (294)
196 TIGR00657 asp_kinases aspartat 99.4 3.9E-13 8.4E-18 145.6 9.1 110 1-128 170-284 (441)
197 PRK08210 aspartate kinase I; R 99.4 4.6E-13 9.9E-18 143.4 9.3 109 1-128 135-248 (403)
198 PRK08373 aspartate kinase; Val 99.4 1.1E-12 2.4E-17 135.8 9.8 98 1-109 169-271 (341)
199 COG0549 ArcC Carbamate kinase 99.4 1.8E-12 4E-17 126.9 8.7 115 1-126 195-311 (312)
200 cd04245 AAK_AKiii-YclM-BS AAK_ 99.3 2.5E-12 5.3E-17 130.6 9.5 102 1-110 176-281 (288)
201 cd04247 AAK_AK-Hom3 AAK_AK-Hom 99.3 2.8E-12 6E-17 131.0 9.4 109 1-127 192-305 (306)
202 PRK07431 aspartate kinase; Pro 99.3 2.9E-12 6.2E-17 143.6 10.3 110 1-128 130-245 (587)
203 PF05893 LuxC: Acyl-CoA reduct 99.3 6.5E-10 1.4E-14 118.4 27.6 244 241-489 81-368 (399)
204 cd04258 AAK_AKiii-LysC-EC AAK_ 99.3 3.9E-12 8.4E-17 129.4 9.8 101 1-110 180-285 (292)
205 cd04240 AAK_UC AAK_UC: Unchara 99.3 4.1E-12 9E-17 123.0 7.7 92 16-125 111-203 (203)
206 PRK04531 acetylglutamate kinas 99.3 1.1E-11 2.3E-16 131.3 11.2 117 1-128 131-250 (398)
207 PRK09084 aspartate kinase III; 99.3 9.5E-12 2.1E-16 134.5 9.8 110 1-128 176-290 (448)
208 PRK08961 bifunctional aspartat 99.3 7.2E-12 1.6E-16 145.8 9.0 101 1-110 192-297 (861)
209 PRK09436 thrA bifunctional asp 99.3 1.1E-11 2.4E-16 142.9 10.0 110 1-128 184-298 (819)
210 COG0527 LysC Aspartokinases [A 99.2 3.3E-11 7.2E-16 129.1 9.5 110 1-128 176-290 (447)
211 PRK09034 aspartate kinase; Rev 99.2 4E-11 8.7E-16 130.0 9.8 110 1-128 176-290 (454)
212 PLN02551 aspartokinase 99.1 3.3E-10 7.1E-15 124.0 9.1 110 1-128 234-349 (521)
213 PRK09466 metL bifunctional asp 99.0 5.4E-10 1.2E-14 128.2 9.1 109 1-127 187-300 (810)
214 COG2054 Uncharacterized archae 99.0 1.2E-09 2.6E-14 100.2 6.8 95 19-128 116-211 (212)
215 cd04248 AAK_AK-Ectoine AAK_AK- 98.9 3.8E-09 8.2E-14 106.9 7.6 99 1-110 192-297 (304)
216 PRK09181 aspartate kinase; Val 98.8 6.4E-09 1.4E-13 112.8 8.1 108 1-128 198-312 (475)
217 KOG2449 Methylmalonate semiald 98.8 1.8E-09 3.8E-14 94.5 2.3 68 431-498 76-143 (157)
218 PLN02825 amino-acid N-acetyltr 98.7 1.9E-07 4.2E-12 101.8 13.9 120 1-128 171-365 (515)
219 PF07368 DUF1487: Protein of u 98.6 4E-07 8.8E-12 87.2 10.8 172 360-540 8-212 (215)
220 KOG0456 Aspartate kinase [Amin 98.3 6.9E-07 1.5E-11 91.0 4.3 110 1-128 261-376 (559)
221 PRK11905 bifunctional proline 98.0 1.9E-05 4E-10 94.7 10.0 100 238-354 1069-1174(1208)
222 PF00815 Histidinol_dh: Histid 96.5 1.2 2.6E-05 47.5 24.1 279 208-537 69-378 (412)
223 COG0141 HisD Histidinol dehydr 95.0 2.5 5.5E-05 44.9 19.0 224 237-498 106-349 (425)
224 PRK13770 histidinol dehydrogen 94.7 7.3 0.00016 41.7 23.4 253 237-537 100-382 (416)
225 KOG2436 Acetylglutamate kinase 94.3 0.035 7.6E-07 59.5 3.4 121 1-128 238-360 (520)
226 TIGR00069 hisD histidinol dehy 94.2 6.8 0.00015 41.6 20.0 255 237-537 78-361 (393)
227 cd06572 Histidinol_dh Histidin 94.1 9.4 0.0002 40.6 25.0 255 237-537 82-365 (390)
228 PRK00877 hisD bifunctional his 93.7 12 0.00025 40.3 23.6 279 209-537 85-392 (425)
229 PLN02926 histidinol dehydrogen 93.6 12 0.00027 40.2 25.7 255 237-536 110-394 (431)
230 PRK12447 histidinol dehydrogen 93.0 15 0.00032 39.5 22.7 252 237-536 105-386 (426)
231 PRK13769 histidinol dehydrogen 88.6 36 0.00077 36.0 26.4 245 237-536 83-340 (368)
232 PRK11809 putA trifunctional tr 84.2 2.5 5.3E-05 51.9 7.5 92 238-345 1178-1269(1318)
233 COG1778 Low specificity phosph 80.7 6.6 0.00014 36.3 7.1 61 38-117 10-70 (170)
234 PF03437 BtpA: BtpA family; I 74.7 8.6 0.00019 38.6 6.7 59 86-146 190-253 (254)
235 TIGR02726 phenyl_P_delta pheny 74.6 17 0.00036 34.2 8.3 60 38-118 9-70 (169)
236 COG0434 SgcQ Predicted TIM-bar 70.1 8.9 0.00019 37.8 5.3 68 79-147 186-259 (263)
237 PF13376 OmdA: Bacteriocin-pro 51.3 23 0.0005 27.3 3.7 35 135-169 7-41 (63)
238 PRK15126 thiamin pyrimidine py 46.7 44 0.00095 33.4 6.1 28 89-116 26-53 (272)
239 cd01390 HMGB-UBF_HMG-box HMGB- 44.6 56 0.0012 24.7 5.1 35 143-177 30-64 (66)
240 PRK03669 mannosyl-3-phosphogly 44.2 25 0.00055 35.3 3.9 27 89-115 31-57 (271)
241 PF09011 HMG_box_2: HMG-box do 41.2 80 0.0017 24.8 5.6 35 143-177 34-68 (73)
242 PF06945 DUF1289: Protein of u 41.0 31 0.00068 25.5 2.9 22 150-171 28-49 (51)
243 PF00505 HMG_box: HMG (high mo 38.7 73 0.0016 24.3 4.9 36 144-179 31-66 (69)
244 PRK10976 putative hydrolase; P 37.7 36 0.00078 33.9 3.8 28 89-116 26-53 (266)
245 PTZ00174 phosphomannomutase; P 37.5 34 0.00073 33.9 3.5 27 90-116 30-56 (247)
246 smart00398 HMG high mobility g 35.9 1E+02 0.0022 23.3 5.4 35 144-178 32-66 (70)
247 TIGR01670 YrbI-phosphatas 3-de 34.7 2E+02 0.0044 26.0 8.0 59 38-117 3-63 (154)
248 PRK01158 phosphoglycolate phos 34.1 45 0.00097 32.2 3.7 26 90-115 28-53 (230)
249 PRK10530 pyridoxal phosphate ( 33.6 47 0.001 33.0 3.9 27 89-115 27-53 (272)
250 PRK10187 trehalose-6-phosphate 33.5 1.7E+02 0.0038 29.3 8.0 26 92-117 46-72 (266)
251 PRK10513 sugar phosphate phosp 32.6 50 0.0011 32.9 3.8 27 89-115 27-53 (270)
252 cd01388 SOX-TCF_HMG-box SOX-TC 31.2 1.2E+02 0.0025 23.7 5.0 34 143-176 31-64 (72)
253 PRK14501 putative bifunctional 28.4 3.1E+02 0.0067 31.9 9.9 72 21-117 477-550 (726)
254 PLN02887 hydrolase family prot 28.1 1.4E+02 0.003 33.9 6.7 28 89-116 332-359 (580)
255 cd00084 HMG-box High Mobility 27.5 1.8E+02 0.0039 21.6 5.4 34 143-176 30-63 (66)
256 PRK12702 mannosyl-3-phosphogly 25.8 2.8E+02 0.0061 28.6 7.8 12 38-49 3-15 (302)
257 PRK09484 3-deoxy-D-manno-octul 22.9 1.7E+02 0.0038 27.4 5.5 61 36-117 21-83 (183)
258 smart00775 LNS2 LNS2 domain. T 20.5 1.3E+02 0.0029 27.6 4.0 24 89-112 34-57 (157)
No 1
>PLN02418 delta-1-pyrroline-5-carboxylate synthase
Probab=100.00 E-value=5.6e-111 Score=944.75 Aligned_cols=555 Identities=81% Similarity=1.212 Sum_probs=489.3
Q ss_pred CCcccCCccccCCCC------CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcC
Q 008588 1 MPVSFDNRNNFQDSS------GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFG 74 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~------~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~ 74 (560)
|||++|+....+..+ ..|+|||++|+++|.+++||.|+|+|||||||++||++|++++|++++..+....+..+
T Consensus 151 iPVv~~nd~v~~~~~~~~~~~~~~~d~D~~A~~lA~~l~Ad~li~~TdVdGvy~~~p~~~~a~~i~~i~~~~~~~~i~~~ 230 (718)
T PLN02418 151 IPIFNENDAVSTRRAPYEDSSGIFWDNDSLAALLALELKADLLILLSDVEGLYTGPPSDPSSKLIHTYIKEKHQDEITFG 230 (718)
T ss_pred EEEEcCCCCccccccccccccCeecCcHHHHHHHHHHcCCCEEEEeecCCeeecCCCCCCCceEcceecccchhhhhhcc
Confidence 699999544432222 26899999999999999999999999999999999988999999999876654334445
Q ss_pred CCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecCCCcccch--hhHHHHHHHHHHHHHHH
Q 008588 75 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWVKQ--VGAREMAVAARESSRRL 152 (560)
Q Consensus 75 ~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~~~~~~~~--~~v~~av~~A~~A~~~w 152 (560)
+.+.++||||.+|++||+.+.++|++++|+||++|+++.++++|+..||++.+..|.|.+. +++++++++|++||+.|
T Consensus 231 ~~s~~~tGGM~~Kl~Aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~~~~~~~~~~~~~~~~~aA~~A~~~W 310 (718)
T PLN02418 231 EKSRVGRGGMTAKVKAAVNAASAGIPVVITSGYALDNIRKVLRGERVGTLFHQDAHLWAPSKEVGAREMAVAARESSRKL 310 (718)
T ss_pred cccccCCCCcHHHHHHHHHHHHCCCcEEEeCCCCcchHHHHhcCCCCceEeccccchhhhccHHHHHHHHHHHHHHHHHH
Confidence 5567899999999999999999999999999999999999999999999999988877622 46999999999999999
Q ss_pred hhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccc
Q 008588 153 QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKR 232 (560)
Q Consensus 153 ~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~ 232 (560)
+++|..+|.++|++++++|++|.++|++++++|++.++|+|++..+.+.+..+..|+..++..++++++..+..|+..+.
T Consensus 311 ~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~g~~~~~ 390 (718)
T PLN02418 311 QALSSEERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADMEDPIGRVLKR 390 (718)
T ss_pred HhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCccccCccccc
Confidence 99999999999999999999999999999999888888888555444444344568999999999999775555654331
Q ss_pred cccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCc----E
Q 008588 233 TELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL----I 308 (560)
Q Consensus 233 ~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gv----v 308 (560)
.....+...+++|+|+|||++|+||||+.+.++++|||++||+||+||||.||+|+.++++++++ +||+|+ +
T Consensus 391 ~~~~~~~~~~~~r~PlGVV~~I~PwnP~~~~~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~e----AlP~gv~~~v~ 466 (718)
T PLN02418 391 TEVADGLVLEKTSCPLGVLLIIFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITD----AIPKTVGGKLI 466 (718)
T ss_pred cccCCCceEEEEEEeeeEEEEEeCCCcHHHHHHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHH----HccccCCcceE
Confidence 11123444678899999999999999976559999999999999999999999999999999987 388885 9
Q ss_pred EeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCcccc
Q 008588 309 GLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNA 388 (560)
Q Consensus 309 ~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g~C~a 388 (560)
|+|+++++++++|..||+||+|+||||+++++.++..+.||++||||||||+||++|||+|.|++.+++|+|.|+|+|+|
T Consensus 467 nvv~g~~~~g~~L~~~~~v~~V~FTGSt~~i~~~aa~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~nGQ~C~a 546 (718)
T PLN02418 467 GLVTSRDEIPDLLKLDDVIDLVIPRGSNKLVSQIKASTKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDYPAACNA 546 (718)
T ss_pred EEeCCcHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHhcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCCCCcccc
Confidence 99997667899999999999999999999999888777899999999999999999999999999999999999669999
Q ss_pred cceEEEeCccCCcc-hHHHHHHHHHhcCCeEecCccccccccCCCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCc
Q 008588 389 METLLVHKDLACNG-ALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH 467 (560)
Q Consensus 389 ~~rv~V~~~i~dd~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL 467 (560)
++|+|||++|| |+ .+..+++.+.+.|++++|+++..+++.+++|++++||+||||++|++|+|+||||+++|+++|||
T Consensus 547 ~~RllVh~~i~-d~G~~~~~i~~a~~~Ga~l~Gg~~~~g~l~~~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGL 625 (718)
T PLN02418 547 METLLVHKDLV-QNGGLNDLLVALRSAGVTLYGGPRASKLLNIPEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAH 625 (718)
T ss_pred CcEEEEecccc-ccccHHHHHHHHHHCCCEEECCccccCeeCCCCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCC
Confidence 99999999999 58 77888898899999988775533443335789999999999999999999999999999999999
Q ss_pred eeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEEcCceeeeCCC
Q 008588 468 TDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDGDQ 547 (560)
Q Consensus 468 ~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~~~~~~~~ 547 (560)
+++|||+|.+++++|++++++|+||||+++.+.+..||||+++||+|+|+.+++|++|+++||+.|+|+++.+++|++++
T Consensus 626 sa~V~T~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~PfGG~k~SG~stGr~~~~G~~gl~~~t~~K~v~~g~g~~~~~~~ 705 (718)
T PLN02418 626 TDCIVTEDSEVAEIFLRQVDSAAVFHNASTRFSDGARFGLGAEVGISTGRIHARGPVGVEGLLTTRWILRGNGQVVDGDK 705 (718)
T ss_pred eeEEEcCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCCcccccccCCcCCCCCHHHHHHHhcEEEEEECCCeecCCCC
Confidence 99999999999999999999999999998766677899999999997666656799999999999999999999999999
Q ss_pred CceeeeccccCCC
Q 008588 548 GVVYTHKNLALQS 560 (560)
Q Consensus 548 ~~~~~~~~~~~~~ 560 (560)
+++|+|+.|.|||
T Consensus 706 ~~~~~~~~~~~~~ 718 (718)
T PLN02418 706 GVVYTHKDLPLQS 718 (718)
T ss_pred CcccccccccCCC
Confidence 9999999999997
No 2
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=100.00 E-value=2.5e-107 Score=916.99 Aligned_cols=553 Identities=74% Similarity=1.093 Sum_probs=487.8
Q ss_pred CCcccC-CccccCCCC-----CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcC
Q 008588 1 MPVSFD-NRNNFQDSS-----GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFG 74 (560)
Q Consensus 1 ~Pv~~g-d~~~~~~~~-----~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~ 74 (560)
|||+++ |++.+...+ ..|+|||++|+++|.+++||.|+++|||||||++||++|++++|++++..+....+..+
T Consensus 143 iPVin~nD~V~~~~~~~~~~~g~~~d~D~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~ 222 (715)
T TIGR01092 143 VPVVNENDAVSTRAAPYSDSQGIFWDNDSLAALLALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFG 222 (715)
T ss_pred EEEEcCCCcccccccccccccceecchHHHHHHHHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccC
Confidence 699997 887765311 24999999999999999999999999999999999988999999999976655345455
Q ss_pred CCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecCCCccc-c-hhhHHHHHHHHHHHHHHH
Q 008588 75 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHLWV-K-QVGAREMAVAARESSRRL 152 (560)
Q Consensus 75 ~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~~~~~~-~-~~~v~~av~~A~~A~~~w 152 (560)
+.+.++||||.+|++++..+.++|++++|+||++|+++.++++|+..||++.+..|-|. . .++++..+++|++||++|
T Consensus 223 ~~~~~~tGGM~~Kl~aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~~~~~~~~~~~~~~~~~~~~~~~A~~A~~~w 302 (715)
T TIGR01092 223 TKSRLGRGGMTAKVKAAVWAAYGGTPVIIASGTAPKNITKVVEGKKVGTLFHEDAHLWPTVEQTGERDMAVAARESSRML 302 (715)
T ss_pred cccccCCCCchHHHHHHHHHHHCCCeEEEeCCCCcchHHHHhcCCCCceEecccchhhhhhhHHHHHHHHHHHHHHHHhh
Confidence 55678999999999999999999999999999999999999999989999988755443 1 145899999999999999
Q ss_pred hhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccc
Q 008588 153 QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKR 232 (560)
Q Consensus 153 ~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~ 232 (560)
+++|.++|.++|++++++|++|.++|++++.+++..+++.+..+..+.++..+..++..+++.++++++..++.|...+.
T Consensus 303 ~~~~~~~R~~~L~~la~~l~~~~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~~~~~g~~~~~ 382 (715)
T TIGR01092 303 QALSSEQRKEILHDIADALEDNEDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAMEDPIGRVLKR 382 (715)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcCCCcccccccc
Confidence 99999999999999999999999999999999998887666677788899999999999999999998754555554321
Q ss_pred cccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcC----cE
Q 008588 233 TELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK----LI 308 (560)
Q Consensus 233 ~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~g----vv 308 (560)
.....+...+.+|+|+|||++|+||+|.+..++++|||+|||+||+||||.||+|+.+++++++++ ||+| ++
T Consensus 383 ~~~~~~~~~~~~~~P~GVV~~I~PwNP~~~~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a----lp~g~~~~~~ 458 (715)
T TIGR01092 383 TRIADNLILEKTSVPIGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA----IPIHVGKKLI 458 (715)
T ss_pred cccCCCceeEEEEeeceEEEEEeCCChHHHHHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH----cCCCCCCcEE
Confidence 111223445788999999999999999766799999999999999999999999999999999984 6665 78
Q ss_pred EeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCcccc
Q 008588 309 GLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNA 388 (560)
Q Consensus 309 ~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g~C~a 388 (560)
|+|+++++++++|..||+||+|+||||+++||.|+++|.||+++|||||||+||++||||+.|++.+++++|.|+|+|+|
T Consensus 459 ~~v~~~~~~~~~l~~~~~vd~I~fTGS~~vG~~i~~~A~~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~GQ~C~a 538 (715)
T TIGR01092 459 GLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKKSTKIPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDYPAACNA 538 (715)
T ss_pred EEeCChHHHHHHHhcCCCccEEEEcCCHHHHHHHHHhCCCCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCCCCcccc
Confidence 99986667889999999999999999999999999888899999999999999999999999998888888888669999
Q ss_pred cceEEEeCccCCcc-hHHHHHHHHHhcCCeEecCccccccccC--CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCC
Q 008588 389 METLLVHKDLACNG-ALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGS 465 (560)
Q Consensus 389 ~~rv~V~~~i~dd~-f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~ 465 (560)
++|+|||++|| |+ ++.++++.+.+.|++++|+.+...++++ ++|++++||+||||++|++|+|+||||+++|+++|
T Consensus 539 ~~rvlV~~~i~-d~~~~~~~v~~~~~~Ga~l~Gg~~~~~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~ 617 (715)
T TIGR01092 539 METLLVHKDLL-RNGLLDDLIDMLRTEGVTIHGGPRFAAYLTFNISETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGS 617 (715)
T ss_pred CcEEEEehhhc-cchhHHHHHHHHHHCCCEEECCcchhheeccCCCCchhhhccccCceEEEEEECCHHHHHHHHHcCCC
Confidence 99999999999 57 7788888888888888877543334332 46899999999999999999999999999999999
Q ss_pred CceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEEcCceeeeC
Q 008588 466 AHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVVDG 545 (560)
Q Consensus 466 GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~~~~~~ 545 (560)
||++||||+|.+++++|++++++|+||||+++...+..||||+++||+|+++.|++|++|+++||+.|+|+++.+++|++
T Consensus 618 gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~~~~~~~pfGG~k~SG~g~~~~~~~g~~~l~~~~~~k~v~~g~g~~~~~ 697 (715)
T TIGR01092 618 AHTDCIVTEDENVAEFFLQHVDSAAVFHNASTRFSDGFRFGLGAEVGISTSRIHARGPVGVEGLLTTRWLLRGKGQVVSG 697 (715)
T ss_pred CCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCcCccccccccCCCCCCChhHHHHhceEEEEEECCCeecCC
Confidence 99999999999999999999999999999887666778999999999998766678999999999999999999999999
Q ss_pred CCCceeeeccccC
Q 008588 546 DQGVVYTHKNLAL 558 (560)
Q Consensus 546 ~~~~~~~~~~~~~ 558 (560)
+++.+|+|+.|.+
T Consensus 698 ~~~~~~~~~~~~~ 710 (715)
T TIGR01092 698 DHGLVYTHKDLPI 710 (715)
T ss_pred CCCcceecccCCc
Confidence 9999999998764
No 3
>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional
Probab=100.00 E-value=4e-88 Score=722.12 Aligned_cols=407 Identities=42% Similarity=0.719 Sum_probs=370.5
Q ss_pred hhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHH
Q 008588 136 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 215 (560)
Q Consensus 136 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 215 (560)
+|+++++++|++||+.|+++|..+|.++|++++++|++|.++|++++++|+++++++|+++++.+++..+..++..+++.
T Consensus 4 ~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 83 (417)
T PRK00197 4 EYLEELGRRAKAASRKLAQLSTAQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEG 83 (417)
T ss_pred hHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHH
Confidence 58999999999999999999999999999999999999999999999999999998888888878888888899999999
Q ss_pred HHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 216 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
+++++.+++..|...+......+...+++|+|+|||++|+||+|.+++++++|||++||+||+||||.||+|+.++++++
T Consensus 84 ~~~~a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVv~~I~p~p~~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~ 163 (417)
T PRK00197 84 LRQVAALPDPVGEVLDGWTLPNGLRIGRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVI 163 (417)
T ss_pred HHHHhhcCCCccccccceecCCCceEEEEecCceEEEEEcCCCchHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHH
Confidence 99998766544543322111223356889999999999999988888899999999999999999999999999999999
Q ss_pred HHhcccc-cCcCcEEeecC-C-chhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHH
Q 008588 296 TSAIPDT-VGEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 372 (560)
Q Consensus 296 ~~al~~a-lP~gvv~vv~~-~-~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa 372 (560)
.+++.++ +|+|+||+|++ + ++++++|..||+||+|+||||+++|++|++++.||+++|||||||+||++|||+|.|+
T Consensus 164 ~~~l~~aGlP~gv~~~v~g~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a~~~~~lELGGk~p~IV~~dAdl~~Aa 243 (417)
T PRK00197 164 QEALEEAGLPADAVQLVETTDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENATVPVIEHGDGICHIYVDESADLDKAL 243 (417)
T ss_pred HHHHHHcCcChhhEEEecCCChHHHHHHhccCCCccEEEecCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHH
Confidence 9888889 99999999994 4 4578999999999999999999999999988899999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCcccccccc-C--CCCCcccccccCceEEEEE
Q 008588 373 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I--PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 373 ~~iv~~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v--~~~~~~~eE~FGPVl~v~~ 449 (560)
+.+++|+|.|+|+|+|++|+|||++|| |+|+++|+++++++++++.|++...+++| | ++|++++||+||||++|++
T Consensus 244 ~~iv~~~~~n~G~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~~~~~~~~~~~~PTi~~~~~~i~~eE~FGPVl~v~~ 322 (417)
T PRK00197 244 KIVLNAKTQRPSVCNALETLLVHEAIA-EEFLPKLAEALAEAGVELRGDEAALALLPDVVPATEEDWDTEYLDLILAVKV 322 (417)
T ss_pred HHHHHhccCCCcccccceEEEEEHHHh-HHHHHHHHHHHHHCCCeEecCHHHHHhhcccccCCcchhhhhhhCceEEEEE
Confidence 999999999999999999999999999 69999999999999988776654334668 4 5789999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcc
Q 008588 450 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 529 (560)
Q Consensus 450 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~f 529 (560)
|+|+||||+++|+++|||++||||+|.+++++|++++++|+|+||+++...+..|||++++||+|+++.+++|++|+++|
T Consensus 323 ~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~~~~~~p~G~~~~sG~g~~~~~~~g~~~l~~~ 402 (417)
T PRK00197 323 VDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEEL 402 (417)
T ss_pred eCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCccCCCCccccchhheeecCCCcCCCccchHhh
Confidence 99999999999999999999999999999999999999999999998766677899999999998767778899999999
Q ss_pred eEEEEEEEcCceee
Q 008588 530 LTTRWILRGNGHVV 543 (560)
Q Consensus 530 t~~K~v~~~~~~~~ 543 (560)
|+.|+|+++++++|
T Consensus 403 ~~~k~v~~~~~~~~ 416 (417)
T PRK00197 403 TTYKYIVLGDGQIR 416 (417)
T ss_pred cEEEEEEECCCeeC
Confidence 99999999999887
No 4
>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19. Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).
Probab=100.00 E-value=2.2e-86 Score=706.37 Aligned_cols=398 Identities=45% Similarity=0.757 Sum_probs=358.8
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+.+++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+++++++|+++++.+++..+..|++.+++.++++
T Consensus 2 ~~~~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~ 81 (406)
T cd07079 2 ELAKRAKAASRALATLSTEQKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQV 81 (406)
T ss_pred hHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999998988877788888888999999999999
Q ss_pred hcccccccccccccccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhc
Q 008588 220 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 299 (560)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al 299 (560)
+...+..|...+......+...+++|+|+|||++|+||+|++++++++|||++||+||+||||.||+++.+++++++++|
T Consensus 82 a~~~~~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l 161 (406)
T cd07079 82 AALPDPVGEVLRGWTLPNGLQIEKVRVPLGVIGIIYESRPNVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEAL 161 (406)
T ss_pred HhcCCCCcccccceeccCccceeEEecceEEEEEecCCCcchHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHH
Confidence 86555444433211112233567889999999999999887888999999999999999999999999999999999888
Q ss_pred ccc-cCcCcEEeecC-Cc-hhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHH
Q 008588 300 PDT-VGEKLIGLVTS-RE-EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 376 (560)
Q Consensus 300 ~~a-lP~gvv~vv~~-~~-~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa~~iv 376 (560)
.++ +|+|++|+|++ +. +++++|.+||+||+|+||||+++|++|+++|.||+++|||||||+||++|||||.|++.++
T Consensus 162 ~~aG~P~gvv~~v~g~~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a~~pv~lELGGk~p~IV~~dADl~~Aa~~i~ 241 (406)
T cd07079 162 EEAGLPEDAVQLIPDTDREAVQELLKLDDYIDLIIPRGGAGLIRFVVENATIPVIKHGDGNCHVYVDESADLEMAVRIVV 241 (406)
T ss_pred HHcCCCcccEEEecCCChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhcCCCEEeecCCcceEEEeCCCCHHHHHHHHH
Confidence 888 99999999995 43 6789999999999999999999999999888999999999999999999999999999999
Q ss_pred hhcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccc-c-C-CCCCcccccccCceEEEEEeCCH
Q 008588 377 DAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-Q-I-PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 377 ~~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~-p-v-~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
+|+|.|+|+|+|++|+|||++|| |+|+++|+++++++|+++.++.+...++ | + ++|++++||+||||++|++|+|+
T Consensus 242 ~~~f~n~G~C~a~~rv~V~~si~-d~f~~~l~~~~~~~ga~~~~g~~~~~~~~ptv~~d~~i~~eE~FGPVl~v~~~~~~ 320 (406)
T cd07079 242 NAKTQRPSVCNALETLLVHRDIA-EEFLPKLAEALREAGVELRGDEETLAILPGAKPATEEDWGTEYLDLILAVKVVDSL 320 (406)
T ss_pred HcccCCCcccccceeEEEeHHHH-HHHHHHHHHHHHHCCCEEecCHHHHHhcccccCCCcchhhhhhhCceeEEEEeCCH
Confidence 99999999999999999999999 6999999999999999887765433455 4 5 47999999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
||||+++|+++|||++||||+|.++++++++++++|+|+||+++...+.+|||++++||+|++.++++|.+|+++||+.|
T Consensus 321 deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~~~~~~pfg~~~~sG~~~~~g~~~g~~~l~~~~~~k 400 (406)
T cd07079 321 DEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTRFTDGGEFGLGAEIGISTQKLHARGPMGLEELTTYK 400 (406)
T ss_pred HHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCcccCCCccccceeeeeecCCCcCCCCcChHHhcEEE
Confidence 99999999999999999999999999999999999999999987666678999999999976556678999999999999
Q ss_pred EEEEc
Q 008588 534 WILRG 538 (560)
Q Consensus 534 ~v~~~ 538 (560)
+|+++
T Consensus 401 ~i~~~ 405 (406)
T cd07079 401 YIVRG 405 (406)
T ss_pred EEEeC
Confidence 99865
No 5
>KOG2450 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2.1e-85 Score=678.88 Aligned_cols=398 Identities=17% Similarity=0.206 Sum_probs=350.8
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
++.+|+.++++...+ .+||++|+++||+||+ .|++++..+|.++|+++|++++++.++|+...+.|-+++
T Consensus 42 nP~tg~~i~~v~~~~------~~dVd~aV~aAr~Af~~~~W~~~~~~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp-- 113 (501)
T KOG2450|consen 42 NPATGEVIAKVAEAT------EEDVDEAVKAARSAFKLVDWAKRDAAERGRLLRKLADLIEQDADVLAALEVLDNGKP-- 113 (501)
T ss_pred cCCCCCeEEEecccc------HHHHHHHHHHHHHhcCcCccccCCHHHHHHHHHHHHHHHHhhhHHHhhhcccccCCc--
Confidence 445677777776666 8999999999999999 799999999999999999999999999999876654333
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
+.+++ ..++...++.+|+++++++.. +...+. ..+...|++++|+|||+.|+|| ||+ +..||++|
T Consensus 114 --~~~a~-------~~Dl~~~~~~~ry~ag~ad~~~~~~~~~---~~~~~~yt~~eP~GV~G~I~pWN~Pllm~awKlaP 181 (501)
T KOG2450|consen 114 --YPEAL-------VSDLPPAIDCFRYYAGWADKIHGSTIPT---DGEFFAYTRREPIGVCGQIIPWNFPLLMQAWKLAP 181 (501)
T ss_pred --chhhh-------hcCchhhhhHHHhhccchhhcccccCCC---CCceEEEecCCcceeeeEeccCchHHHHHHHhhhh
Confidence 22332 146888999999999988644 544332 3456789999999999999999 696 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+||||+||+|++.+++++.+ + +|+||+|+|+| |.++++.|.+||+|++|+||||+.+|+.|++++
T Consensus 182 ALa~GNtvV~Kpae~tplsal~~~~l~~e----aG~P~GVvNii~G~G~~aG~al~sH~dv~kiaFTGSt~~G~~I~~aa 257 (501)
T KOG2450|consen 182 ALAAGNTVVLKPAEQTPLTALYLASLCKE----AGFPPGVVNIVPGSGTTAGAALASHPDVDKVAFTGSTPVGKEIMEAA 257 (501)
T ss_pred HHhhCcEEEecCCCCCCchHHHHHHHhHH----hcCCcceEEEccCCCchHHHHHhhCCCCceEEecCCCcchhHHhhhh
Confidence 99999999999999999999999999997 6 99999999996 888999999999999999999999999999887
Q ss_pred C----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh-cCC----
Q 008588 347 K----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV---- 416 (560)
Q Consensus 347 ~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~-~~~---- 416 (560)
+ ||++||||||+|.||++|||+|.|++.+.++.|+|.| +|++.+|+|||++|| |+|++++++++++ +++
T Consensus 258 a~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iy-defv~~~v~~a~~~~kvGdP~ 336 (501)
T KOG2450|consen 258 AESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIY-DEFVEKFVAAAKKKLKVGDPF 336 (501)
T ss_pred hhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHH-HHHHHHHHHHHhcccccCCCC
Confidence 3 9999999999999999999999999999999999988 999999999999999 6999999999865 422
Q ss_pred ------------------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 ------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 ------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +||.+. .++| | | ++|.+++||+||||++|++|++.||
T Consensus 337 ~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEIFGPVv~v~~F~t~eE 416 (501)
T KOG2450|consen 337 DEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEIFGPVVVVLKFKTEEE 416 (501)
T ss_pred CcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhccCceEEEEecCcHHH
Confidence 22 354442 2444 6 3 4699999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
+|++||++.|||+++|||+|+++++++++++++|+||||+........||||.++||+|+ +.|.++++.||+.|+|
T Consensus 417 ~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~~~~~~PfgG~K~SG~GR----E~g~~~l~~ytevKtv 492 (501)
T KOG2450|consen 417 VIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNVFDAQVPFGGFKMSGIGR----ELGEYGLEAYTEVKTV 492 (501)
T ss_pred HHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEeccccccccCCccccccccCCc----cccHHHHhhcceeeEE
Confidence 999999999999999999999999999999999999999998888889999999999874 5689999999999999
Q ss_pred EEcCc
Q 008588 536 LRGNG 540 (560)
Q Consensus 536 ~~~~~ 540 (560)
+++.+
T Consensus 493 ~v~~~ 497 (501)
T KOG2450|consen 493 TVKLP 497 (501)
T ss_pred EEeCC
Confidence 98754
No 6
>KOG2451 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=5.5e-84 Score=639.73 Aligned_cols=399 Identities=16% Similarity=0.181 Sum_probs=350.5
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.+|.+...+ -+|.++||++|.+||.+|++++..+|.++|+++.++|.+|.++|+++++.|.+++
T Consensus 43 V~nPa~geii~~V~~~~------V~e~~kAI~aA~EaF~s~~~~takeRs~lLrkwy~Li~en~ddLa~iiTlE~GKp-- 114 (503)
T KOG2451|consen 43 VDNPANGEIIGKVADMT------VEEAEKAIDAAYEAFKSYRNLTAKERSALLRKWYELIMENKDDLATIITLENGKP-- 114 (503)
T ss_pred ccCCCccchhhcccCCc------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhchHHHHHHHhhhcCCc--
Confidence 35677888888776655 7899999999999999999999999999999999999999999999998665443
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
+.+ +..|+.+.+..++||++.+ +..|...++. ..+.+..+.++|+||+++|+|| ||. +..+|+++
T Consensus 115 --L~e--------A~gEv~y~a~f~eWyAeEA~RvyGdii~s~--~~~rr~i~ikQPvGV~alItPWNFP~AMItRK~gA 182 (503)
T KOG2451|consen 115 --LGE--------AKGEVAYSAAFFEWYAEEARRVYGDIIPSL--NPNRRLIVIKQPVGVVALITPWNFPAAMITRKAGA 182 (503)
T ss_pred --hhh--------ccceeehhHHHHHHHHHHhhhhhccccCCC--CCCceEEEEeccceeEEEecCcCChHHHHHhHHHH
Confidence 222 3568889999999999765 4667776532 3455678899999999999998 796 66799999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC----CchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS----REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~----~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
||++|||||+|||++||++++.++++.++ | +|+|++|+|+. ..+.+..|+.+|+|++|+|||||.+||.++
T Consensus 183 ALAaGCTvVvkPs~~TPlsaLala~lA~~----AGiP~Gv~NVit~~~~~a~eig~~lctsp~VrkisFTGST~VGKiL~ 258 (503)
T KOG2451|consen 183 ALAAGCTVVVKPSEDTPLSALALAKLAEE----AGIPAGVLNVITADASNAAEIGKELCTSPDVRKISFTGSTNVGKILM 258 (503)
T ss_pred HHhcCceEEEccCCCCchHHHHHHHHHHH----cCCCCcceEEEecCCCChHHHHHHhhcCCceeeEEeeccchHHHHHH
Confidence 99999999999999999999999999887 7 99999999982 346899999999999999999999999999
Q ss_pred HhcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 344 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 344 ~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
++++ |++.||||||.|+||++|||||+|++..+.++|.|+| +|.+++|+|||++|| |+|+++|.++++++++
T Consensus 259 ~qsastvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iy-D~Fv~~l~e~vkkl~vGdG 337 (503)
T KOG2451|consen 259 AQSASTVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIY-DKFVSKLAEAVKKLKVGDG 337 (503)
T ss_pred HhhhhhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhH-HHHHHHHHHHHHheeccCC
Confidence 8874 9999999999999999999999999999999999988 999999999999999 6999999999998632
Q ss_pred -------------------------------eE-ecCcccc----ccc-c-C----C-CCCcccccccCceEEEEEeCCH
Q 008588 417 -------------------------------GL-FGGPRAS----KLL-Q-I----P-ETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 417 -------------------------------~~-~g~~~~~----~~~-p-v----~-~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
++ +||++.. .+| | | + +|.+.+||+|||+.+|++|+|+
T Consensus 338 ~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~eEtFGPla~v~kFdte 417 (503)
T KOG2451|consen 338 LDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSEETFGPLASVFKFDTE 417 (503)
T ss_pred CCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeeccccccccceeeeeCCH
Confidence 11 3444221 133 6 2 3 5888999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
||+|+++|+++.||++|+||+|..+..|++++|++|+|.+|.........||||.++||+|+ +++.+|+++|+..|
T Consensus 418 eEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GR----EgskyGidey~~ik 493 (503)
T KOG2451|consen 418 EEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGR----EGSKYGIDEYLVIK 493 (503)
T ss_pred HHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCc----cccccchhhhhhhh
Confidence 99999999999999999999999999999999999999999988778889999999999984 56889999999999
Q ss_pred EEEEcC
Q 008588 534 WILRGN 539 (560)
Q Consensus 534 ~v~~~~ 539 (560)
++++..
T Consensus 494 ~icig~ 499 (503)
T KOG2451|consen 494 YICIGT 499 (503)
T ss_pred eeeecC
Confidence 998854
No 7
>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]
Probab=100.00 E-value=4.9e-82 Score=681.15 Aligned_cols=397 Identities=22% Similarity=0.229 Sum_probs=340.5
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++|+++|++||+.|+++++.+|.++|++++++|++|.++|+++++.|.+++
T Consensus 19 ~nP~tg~~i~~~~~a~------~~dv~~Av~aA~~a~~~W~~~~~~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~--- 89 (472)
T COG1012 19 INPATGEVIATVPAAT------AEDVDAAVAAARAAFEAWSRLSAEERAAILRRIADLLEARAEELAALITLETGKP--- 89 (472)
T ss_pred eCCCCCCEEeeecCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC---
Confidence 4567888899988877 7899999999999999999999999999999999999999999999988766433
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
+.++ ..++...++.++++++..+ ..+...+.. .+...+++|+|+|||++|+|| ||+ +.+|+++||
T Consensus 90 -i~ea--------~~ei~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~k~apA 157 (472)
T COG1012 90 -ISEA--------RGEIARAADFIRYYAEEARRLEGETIPTD---KGSKALVRREPLGVVGAITPWNFPLALAAWKLAPA 157 (472)
T ss_pred -HHHH--------HHHHHHHHHHHHHHHHHHHHhcCCccCCC---CCcceEEEeecceEEEEECCCCCHHHHHHhhHHHH
Confidence 1232 2347777888888776543 233322211 145678999999999999998 796 678999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
|++||+||+|||+.||+|+..+++++.+ + +|+|+||+|+| +.++++.|..||+|++|+||||+++|++|++.|+
T Consensus 158 LaaGntVV~KPse~tp~sa~~l~~~~~~----aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i~FTGSt~~G~~i~~~Aa 233 (472)
T COG1012 158 LAAGNTVVLKPSEQTPLSALALAELAAE----AGLPAGVLNVVTGGGAEVGDALVAHPDVDAISFTGSTAVGRAIAAAAA 233 (472)
T ss_pred HHcCCEEEEECcccCcHHHHHHHHHHHH----hCCCCCeEEEEeCCCchHHHHHhcCCCCCEEEEECChHHHHHHHHHHh
Confidence 9999999999999999999999999987 5 99999999995 6668888999999999999999999999998883
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh-cCC------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EGV------ 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~-~~~------ 416 (560)
||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||+++| |+|+++|+++ ++ +.+
T Consensus 234 ~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~-d~f~~~l~~~-~~~l~~Gd~~d~ 311 (472)
T COG1012 234 ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVY-DEFVERLVAR-AASLKVGDPLDP 311 (472)
T ss_pred hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhH-HHHHHHHHHH-HhcCCCCCCCCC
Confidence 9999999999999999999999999999999999987 999999999999999 6999999999 76 111
Q ss_pred ----------------------------eE-ecCccccccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 ----------------------------GL-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 ----------------------------~~-~g~~~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
.+ .|+++..++| | | ++|.+++||+||||++|++|+|+||||++
T Consensus 312 ~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~g~~~~PTv~~~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~l 391 (472)
T COG1012 312 STDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPGGYFVEPTILEGVTPDMRIAREEIFGPVLPVIRFKDEEEAIEL 391 (472)
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCCCeEECCEEEecCCCCChhhhccccCCceEEEEeCCHHHHHHH
Confidence 11 2332222333 6 2 46899999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcC--cCCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~--~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+|+++|||+++|||+|..+++++++++++|+||||+... .....||||.+.||+|. ++|.+|+++|++.|+|+.
T Consensus 392 AN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~~~PFGG~k~SG~G~----~~g~~~~~~~~~~k~v~~ 467 (472)
T COG1012 392 ANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYTGGADIAYLPFGGVKQSGLGR----EGGKYGLEEFTEVKTVTI 467 (472)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCCCCCCCCCCCCCCcccccCCc----cchHHHHHHHhcceEEEE
Confidence 999999999999999999999999999999999998753 34568999999999873 468999999999999987
Q ss_pred cCc
Q 008588 538 GNG 540 (560)
Q Consensus 538 ~~~ 540 (560)
+..
T Consensus 468 ~~~ 470 (472)
T COG1012 468 KLG 470 (472)
T ss_pred ecC
Confidence 653
No 8
>TIGR00407 proA gamma-glutamyl phosphate reductase. The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.
Probab=100.00 E-value=3.7e-81 Score=661.49 Aligned_cols=388 Identities=44% Similarity=0.733 Sum_probs=345.5
Q ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc
Q 008588 145 ARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE 224 (560)
Q Consensus 145 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~ 224 (560)
|++||+.|+++|.++|.++|++++++|++|.++|++++++|+..++|+|++..+.+++..+..|++.+++.++++++..+
T Consensus 1 a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~ev~~~~~~~~~~a~~a~ 80 (398)
T TIGR00407 1 AKQAANILAQLSTAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEGRLKGIADGVKDVIELAD 80 (398)
T ss_pred ChhHHHHHHhCCHHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999999998889988899998865556666677899999999999997766
Q ss_pred cccccccccccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-c
Q 008588 225 PIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-V 303 (560)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-l 303 (560)
..|+..+......+...+++|+|+|||++|+||+|++++++++|||++||+||+||||.||+|+.++++++++++.++ +
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~PlGVV~~I~pw~p~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGl 160 (398)
T TIGR00407 81 PVGKVIDGRELDSGLTLERVRVPLGVLGVIYEARPNVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGL 160 (398)
T ss_pred CCcccccceecCCCceEEEEEeCcEEEEEEeCCCchHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCC
Confidence 555443321112355678899999999999999888888999999999999999999999999999999999888889 9
Q ss_pred CcCcEEeecC-C-chhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCC
Q 008588 304 GEKLIGLVTS-R-EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKID 381 (560)
Q Consensus 304 P~gvv~vv~~-~-~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~ 381 (560)
|+|+||+|++ + ++++++|..||+||+|+||||+++|+.+++.+.+|+++|||||||+||++|||+|.|++.+++|+|.
T Consensus 161 P~gvv~~v~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~ 240 (398)
T TIGR00407 161 PVGAVQLIETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQTSTIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQ 240 (398)
T ss_pred ChhHEEEecCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHhCCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcC
Confidence 9999999995 4 4578999999999999999999999999887789999999999999999999999999999999998
Q ss_pred CCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccc----c-C--CCCCcccccccCceEEEEEeCCHH
Q 008588 382 YPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL----Q-I--PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 382 n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~----p-v--~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
|+|+|+|++|+|||++|| |+|+++|+++++++++.+........++ | + .+|++++||+||||++|++|+|+|
T Consensus 241 ~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~~~~~~~~i~~~v~~g~~tv~~~~~~i~~eE~FgPvl~v~~~~~~~ 319 (398)
T TIGR00407 241 RPSTCNAIETLLVNKAIA-REFLPVLENQLLEKGVTIHADAYALKLLELGPATEAIVCKTDFDKEFLSLDLSVKIVESLE 319 (398)
T ss_pred CCCcccccceEEEeHHHH-HHHHHHHHHHHHhcCCEEecCHHHHHHHhccCccccccccccccchhhCceeEEEEECCHH
Confidence 766999999999999999 6999999999998876552211111122 2 2 257899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
|||+++|+++|||++||||+|.+++++|++++++|+|+||+++.+.+..|||.|.+.|+|+++.|.+|+.+++.||+.|
T Consensus 320 eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~~~~~~pfG~~~~~~~~~~~~~~rg~~~~~~~~~~~ 398 (398)
T TIGR00407 320 AAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTRFTDGFRFGFGAEVGISTQKLHARGPMGLEALTSYK 398 (398)
T ss_pred HHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCCcCCCcccccceeeEEecCCCcCCCCcCHHHhcCCC
Confidence 9999999999999999999999999999999999999999998888889999999999999999999999999999865
No 9
>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional
Probab=100.00 E-value=1.2e-80 Score=674.92 Aligned_cols=398 Identities=17% Similarity=0.166 Sum_probs=341.2
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
..++.+|+.++++...+ .+||++|+++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|.+++.
T Consensus 30 v~nP~tg~~v~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 102 (482)
T PRK11241 30 VTNPANGDKLGSVPKMG------ADETRAAIDAANRALPAWRALTAKERANILRRWFNLMMEHQDDLARLMTLEQGKPL- 102 (482)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 34667899999987777 89999999999999999999999999999999999999999999998876655432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+..+++.+++++...+ ..+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 103 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 169 (482)
T PRK11241 103 ---AEA--------KGEISYAASFIEWFAEEGKRIYGDTIPGH--QADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGP 169 (482)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEeeceEEEEECCCcChHHHHHHHHHH
Confidence 121 2467777888887765432 223222211 1233457889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+||||.||+++.++++++.+ + +|+|+||+|+| +.++++.|..||+||+|+||||+++|++|++.+
T Consensus 170 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~FTGS~~~G~~i~~~a 245 (482)
T PRK11241 170 ALAAGCTMVLKPASQTPFSALALAELAIR----AGIPAGVFNVVTGSAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQC 245 (482)
T ss_pred HHHhCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999996 567788888999999999999999999999887
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
.||++||||||||+||++|||+|.|++.+++|+|.|+| +|+|++|||||++|| |+|+++|+++++++.+
T Consensus 246 a~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 324 (482)
T PRK11241 246 AKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVY-DRFAEKLQQAVSKLHIGDGLEK 324 (482)
T ss_pred HhcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHH-HHHHHHHHHHHhhCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred ----------------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 417 ----------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 417 ----------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
++ +||... .++| | | ++|++++||+||||++|++|+|+||||
T Consensus 325 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~FGPVl~v~~~~~~~eai 404 (482)
T PRK11241 325 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFGPLAPLFRFKDEADVI 404 (482)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCcCCEEEEEEeCCHHHHH
Confidence 12 244321 2333 6 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++|+++|||++||||+|.++++++++++++|+||||+.....+..||||.|.||+|+ ++|.+|+++||+.|+|++
T Consensus 405 ~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~g~~~ft~~k~v~~ 480 (482)
T PRK11241 405 AQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGR----EGSKYGIEDYLEIKYMCI 480 (482)
T ss_pred HHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCCCCCCCCcCCccccccCc----ccHHHHHHHhhcceEEEE
Confidence 9999999999999999999999999999999999999876555568999999999873 569999999999999876
Q ss_pred c
Q 008588 538 G 538 (560)
Q Consensus 538 ~ 538 (560)
.
T Consensus 481 ~ 481 (482)
T PRK11241 481 G 481 (482)
T ss_pred e
Confidence 4
No 10
>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]
Probab=100.00 E-value=3.8e-80 Score=677.89 Aligned_cols=402 Identities=16% Similarity=0.192 Sum_probs=339.8
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.+.++.+|+.++.+...+ .+|+++|+++|++||+.|++++.++|.++|++++++|++|.++|++++++|+|++.
T Consensus 132 ~v~nP~tg~~i~~v~~a~------~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~ 205 (604)
T PLN02419 132 DVINPATQEVVSKVPLTT------NEEFKAAVSAAKQAFPLWRNTPITTRQRVMLKFQELIRKNMDKLAMNITTEQGKTL 205 (604)
T ss_pred EeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 445778888888887777 89999999999999999999999999999999999999999999999887765542
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
.++ ..|+..+++.++++++..+ ..+...+.. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 206 ----~ea--------~~EV~~~i~~~~~~a~~a~~~~g~~~~~~--~~~~~~~~~reP~GVV~~I~PwNfPl~l~~~~ia 271 (604)
T PLN02419 206 ----KDS--------HGDIFRGLEVVEHACGMATLQMGEYLPNV--SNGVDTYSIREPLGVCAGICPFNFPAMIPLWMFP 271 (604)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhhCCccccc--CCCccceEEecCccEEEEECCCccHHHHHHHHHH
Confidence 122 2366777777777765432 223222211 1233457889999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
|||++||+||+|||+.||+++.++++++.+ + ||+|+||+|+|..++++.|..|++||+|+||||+++|+.|+++|
T Consensus 272 pALaAGNtVVlKPSe~tp~ta~~l~~l~~e----AGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~FTGSt~vG~~I~~~A 347 (604)
T PLN02419 272 VAVTCGNTFILKPSEKDPGASVILAELAME----AGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIYARA 347 (604)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----hCcCcceEEEEeCChHHHHHHHhCCCCCEEEEeCChHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999997445677788899999999999999999999877
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
+ ||++||||||||+||++|||||.|++.+++|+|.|+| +|+|++|||||++ | |+|+++|+++++++.+
T Consensus 348 a~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~-d~f~e~l~~~~~~l~vG~p~d~ 425 (604)
T PLN02419 348 AAKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-A-KSWEDKLVERAKALKVTCGSEP 425 (604)
T ss_pred hccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-H-HHHHHHHHHHHHHhccCCCCCC
Confidence 3 8999999999999999999999999999999999987 9999999999999 9 6999999999887532
Q ss_pred ----------------------------eE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 417 ----------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 417 ----------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
++ +|+.+. .+ |+ | | ++|.+++||+||||++|++|+|+
T Consensus 426 ~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~eEiFGPVl~V~~~~~~ 505 (604)
T PLN02419 426 DADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSF 505 (604)
T ss_pred CCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcCCCcCCEEEEEecCCH
Confidence 22 244321 23 33 5 2 36899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
||||+++|+++|||++||||+|.++++++++++++|+|+||+.... .+.+||||.|.||+|.+ +++|.+|+++||+.
T Consensus 506 dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~~~~~~~~PFGG~k~SG~G~~--~~~G~~gl~~ft~~ 583 (604)
T PLN02419 506 DEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPIPVPLPFFSFTGNKASFAGDL--NFYGKAGVDFFTQI 583 (604)
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCcCCcCcCCCCCC--cccHHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999987433 35689999999998721 25699999999999
Q ss_pred EEEEEcCc
Q 008588 533 RWILRGNG 540 (560)
Q Consensus 533 K~v~~~~~ 540 (560)
|+|++...
T Consensus 584 K~v~~~~~ 591 (604)
T PLN02419 584 KLVTQKQK 591 (604)
T ss_pred EEEEEccC
Confidence 99988753
No 11
>PLN02174 aldehyde dehydrogenase family 3 member H1
Probab=100.00 E-value=1.4e-79 Score=662.66 Aligned_cols=386 Identities=20% Similarity=0.216 Sum_probs=321.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 214 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~ 214 (560)
..|+++++++|++||++|+++|.++|.++|++++++|++|.|||++++++|++++. .++...++..+.++++++++
T Consensus 9 ~~~v~~av~~a~~af~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~----~~a~~~Ev~~~~~~~~~~~~ 84 (484)
T PLN02174 9 AADASILVTELRRSFDDGVTRGYEWRVTQLKKLMIICDNHEPEIVAALRDDLGKPE----LESSVYEVSLLRNSIKLALK 84 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999988876542 23322234444455666666
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHH
Q 008588 215 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 292 (560)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~ 292 (560)
.++.+.+... ...... ..+...+++|+|+|||++|+|| ||. ++.++++|||++||+||+||||.||+|+.+++
T Consensus 85 ~~~~~~~~~~---~~~~~~--~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~ 159 (484)
T PLN02174 85 QLKNWMAPEK---AKTSLT--TFPASAEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLA 159 (484)
T ss_pred HHHHHhcccc---cccccc--cCCcceEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH
Confidence 5554432111 011101 1123467889999999999998 796 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHH
Q 008588 293 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLD 369 (560)
Q Consensus 293 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a---~~~~~lElGGk~p~iV~~dADld 369 (560)
+++.+ ++|+|+||+|+|+.+.+..|.+ |+||+|+||||+++|+.|+++| .||++||||||||+||++|||||
T Consensus 160 ~l~~~----~lp~gvv~vv~G~~~~~~~l~~-~~vd~V~FTGS~~~G~~I~~~aa~~l~~v~LELGGk~p~iV~~dADl~ 234 (484)
T PLN02174 160 KLLEQ----YLDSSAVRVVEGAVTETTALLE-QKWDKIFYTGSSKIGRVIMAAAAKHLTPVVLELGGKSPVVVDSDTDLK 234 (484)
T ss_pred HHHHH----hCCCCEEEEEECChHHHHHHhc-ccCCEEEEECChHHHHHHHHHHHhcCCcEEEecCCCCeEEEcCCCCHH
Confidence 99986 4999999999964433444544 7899999999999999999887 38999999999999999999999
Q ss_pred HHHHHHHhhcC-CCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------------------------------
Q 008588 370 VAKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------- 416 (560)
Q Consensus 370 ~Aa~~iv~~~f-~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------- 416 (560)
.|++.+++|+| .|+| +|+|++|+|||+++| |+|+++|+++++++..
T Consensus 235 ~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~g 313 (484)
T PLN02174 235 VTVRRIIAGKWGCNNGQACISPDYILTTKEYA-PKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVS 313 (484)
T ss_pred HHHHHHHHHHhhCCCCCCCCcCcEEEEeHHHH-HHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcC
Confidence 99999999999 5877 999999999999999 6999999998876521
Q ss_pred -eE-ecCccc-ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhh
Q 008588 417 -GL-FGGPRA-SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ 485 (560)
Q Consensus 417 -~~-~g~~~~-~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~ 485 (560)
++ +||... .++ + | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++
T Consensus 314 a~~~~GG~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~ 393 (484)
T PLN02174 314 DKIVYGGEKDRENLKIAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAAT 393 (484)
T ss_pred CEEEECCCcCCCCCEEEEEEEecCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHc
Confidence 12 344322 233 3 5 2 3689999999999999999999999999999999999999999999999999999
Q ss_pred cCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 486 VDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 486 l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
+++|+|+||++.... +..||||.+.||+|. ++|.+|+++||+.|+|+++.
T Consensus 394 l~aG~v~IN~~~~~~~~~~~PfGG~k~SG~Gr----~~G~~gl~~ft~~K~v~~~~ 445 (484)
T PLN02174 394 VSAGGIVVNDIAVHLALHTLPFGGVGESGMGA----YHGKFSFDAFSHKKAVLYRS 445 (484)
T ss_pred CCcceEEECCCcCCCCCCCCCCCCcCccccCc----cchHHHHHHhcceEEEEECC
Confidence 999999999876543 567999999999873 57999999999999998764
No 12
>TIGR03374 ABALDH 1-pyrroline dehydrogenase. Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.
Probab=100.00 E-value=8.8e-79 Score=659.78 Aligned_cols=398 Identities=14% Similarity=0.154 Sum_probs=338.3
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 20 v~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 93 (472)
T TIGR03374 20 VYNPATGEVILEIAEAS------AEQVDAAVRAADAAFAEWGQTTPKARAECLLKLADVIEENAQVFAELESRNCGKPLH 93 (472)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 34667899999988888 899999999999999999999999999999999999999999999988777654421
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
++. ..|+...++.++++++..+ ..+...+.. ..+...++.|+|+|||++|+|| ||. +.+++++|
T Consensus 94 ----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ 160 (472)
T TIGR03374 94 ----SVF-------NDEIPAIVDVFRFFAGAARCLSGLAAGEY--LEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAP 160 (472)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccCcc--CCCceEEEEEecceEEEEECCCCchHHHHHHHHHH
Confidence 111 1256666666666654322 112211111 1233467889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.||+++..+++++.+ +||+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++++.
T Consensus 161 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 236 (472)
T TIGR03374 161 ALAAGNCVVLKPSEITPLTALKLAELAKD----IFPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHILSHTA 236 (472)
T ss_pred HHhcCCEEEecCCCCCCHHHHHHHHHHHH----hCCcCeEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999975 499999999996 6678888889999999999999999999998773
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
||++||||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~~ 315 (472)
T TIGR03374 237 PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIY-DTLVEKLGAAVATLKSGAPDDES 315 (472)
T ss_pred hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 9999999999999999999999999999999999987 999999999999999 6999999999887531
Q ss_pred ----------------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 417 ----------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 417 ----------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
++ .|+... .++| | | ++|++++||+||||++|++|+|+||||
T Consensus 316 ~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai 395 (472)
T TIGR03374 316 TELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVV 395 (472)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCccCceEEEEEECCHHHHH
Confidence 12 233321 1333 6 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++|+++|||++||||+|..+++++++++++|+|+||+.....+.+||||.+.||+|. ++|.+|+++||+.|++++
T Consensus 396 ~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~i~~ 471 (472)
T TIGR03374 396 NWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGK----DMSLYGLEDYTVVRHIMV 471 (472)
T ss_pred HHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCccCc----cchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999877666778999999999863 569999999999999875
No 13
>PLN02315 aldehyde dehydrogenase family 7 member
Probab=100.00 E-value=2.3e-78 Score=660.06 Aligned_cols=404 Identities=16% Similarity=0.199 Sum_probs=341.4
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.+.++.+|+.++++...+ .+|+++|+++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++|+.
T Consensus 37 ~~~nP~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~ 110 (508)
T PLN02315 37 SSVNPANNQPIAEVVEAS------LEDYEEGLRACEEAAKIWMQVPAPKRGEIVRQIGDALRAKLDYLGRLVSLEMGKIL 110 (508)
T ss_pred eeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH
Confidence 345677899999987777 89999999999999999999999999999999999999999999999887765442
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
. ++ ..|+...++.++++++..+ ..+...+.. ..+...+.+|+|+|||++|+|| ||. +++++++
T Consensus 111 ~----~a--------~~ev~~~i~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~ 176 (508)
T PLN02315 111 A----EG--------IGEVQEIIDMCDFAVGLSRQLNGSIIPSE--RPNHMMMEVWNPLGIVGVITAFNFPCAVLGWNAC 176 (508)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecceEEEEECCCcchHHHHHHHHh
Confidence 1 22 2356666677776664332 122222211 1123446789999999999998 796 6789999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
|||++||+||+||||.||+++..+++++.+++.++ +|+|++|+|+++.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 177 ~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~fTGS~~~G~~v~~~a 256 (508)
T PLN02315 177 IALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTV 256 (508)
T ss_pred HHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999888887777778 99999999998666788888999999999999999999999866
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++++
T Consensus 257 a~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~vG~p~~~ 335 (508)
T PLN02315 257 NARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIY-DDVLEQLLTVYKQVKIGDPLEK 335 (508)
T ss_pred HhcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred ----------------------------eE-ecCccc--cccc--c-C----CCCCcccccccCceEEEEEeCCHHHHHH
Q 008588 417 ----------------------------GL-FGGPRA--SKLL--Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAID 458 (560)
Q Consensus 417 ----------------------------~~-~g~~~~--~~~~--p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 458 (560)
++ +|+.+. .++| | | ++|.+++||+||||++|++|+|+||||+
T Consensus 336 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~v~~~~~i~~eE~FGPVl~V~~~~~~deai~ 415 (508)
T PLN02315 336 GTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIVEISPDADVVKEELFGPVLYVMKFKTLEEAIE 415 (508)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEEecCCCChHHhCCCcCCEEEEEEeCCHHHHHH
Confidence 11 233321 2333 6 2 4689999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHh--hcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 459 HIHQHGSAHTDCIVAEDQKVAETFLC--QVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 459 ~aN~~~~GL~a~I~t~d~~~a~~~~~--~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
++|+++|||++||||+|.++++++++ ++++|+||||+++.. .+.+||||.|.||+|. ++|.+|+++||+.|+|
T Consensus 416 ~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~v 491 (508)
T PLN02315 416 INNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGR----EAGSDSWKQYMRRSTC 491 (508)
T ss_pred HHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCCCCCCCCCCCCccccccCCc----cchHHHHHHHhhEEEE
Confidence 99999999999999999999999985 799999999986543 3568999999999863 5689999999999999
Q ss_pred EEcC
Q 008588 536 LRGN 539 (560)
Q Consensus 536 ~~~~ 539 (560)
++++
T Consensus 492 ~~~~ 495 (508)
T PLN02315 492 TINY 495 (508)
T ss_pred EEec
Confidence 8764
No 14
>PLN02766 coniferyl-aldehyde dehydrogenase
Probab=100.00 E-value=6.6e-78 Score=656.96 Aligned_cols=399 Identities=18% Similarity=0.190 Sum_probs=339.2
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
+.++.+|+.++++...+ .+|+++++++|++||+ .|++++.++|+++|++++++|++|.++|++++++|++++
T Consensus 40 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 113 (501)
T PLN02766 40 TRDPRTGEVIARIAEGD------KEDVDLAVKAAREAFDHGPWPRMSGFERGRIMMKFADLIEEHIEELAALDTIDAGKL 113 (501)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCC
Confidence 35677899999988777 8999999999999997 599999999999999999999999999999988776543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.. ++. ..|+...++.+++++... +..|+..+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 114 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 179 (501)
T PLN02766 114 FA----LGK-------AVDIPAAAGLLRYYAGAADKIHGETLKM---SRQLQGYTLKEPIGVVGHIIPWNFPSTMFFMKV 179 (501)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEeccceEEEEECCCCChHHHHHHHH
Confidence 21 221 125556666677666432 122322211 1233457889999999999998 796 567999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.||+++.++++++.+ + ||+|+||+|++ +.++++.|..||+||+|+||||+++||.|++
T Consensus 180 ~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~FTGS~~~G~~i~~ 255 (501)
T PLN02766 180 APALAAGCTMVVKPAEQTPLSALFYAHLAKL----AGVPDGVINVVTGFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQ 255 (501)
T ss_pred HHHHHcCCEEEEeCCCCchHHHHHHHHHHHh----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 6678888889999999999999999999998
Q ss_pred hcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 345 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 345 ~a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
.+. +|++||||||||+||++|||+|.|++.+++|+|.|+| +|+|++|||||++|| |+|+++|+++++++.+
T Consensus 256 ~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~-d~f~~~l~~~~~~l~~G~p 334 (501)
T PLN02766 256 AAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIY-DEFVKKLVEKAKDWVVGDP 334 (501)
T ss_pred HhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCC
Confidence 663 7999999999999999999999999999999999987 999999999999999 6999999999886521
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 335 ~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPVl~v~~~~~~d 414 (501)
T PLN02766 335 FDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFGPVMSLMKFKTVE 414 (501)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccCceEEEEEeCCHH
Confidence 12 244321 23 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+|. ++|++|+++||+.|+
T Consensus 415 eai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~ 490 (501)
T PLN02766 415 EAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYFAFDPDCPFGGYKMSGFGR----DQGMDALDKYLQVKS 490 (501)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHHhceEE
Confidence 9999999999999999999999999999999999999999876666678999999999863 569999999999999
Q ss_pred EEEcC
Q 008588 535 ILRGN 539 (560)
Q Consensus 535 v~~~~ 539 (560)
|++..
T Consensus 491 v~~~~ 495 (501)
T PLN02766 491 VVTPL 495 (501)
T ss_pred EEEec
Confidence 98754
No 15
>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B. Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.
Probab=100.00 E-value=9.1e-78 Score=653.39 Aligned_cols=403 Identities=18% Similarity=0.208 Sum_probs=339.2
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ ++|+++++++|++||++|+++|.++|.++|++++++|++|.++|++++.+|.+++.
T Consensus 16 ~~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 88 (474)
T cd07130 16 SISPANGEPIARVRQAT------PEDYESTIKAAQEAFKEWRDVPAPKRGEIVRQIGDALRKKKEALGKLVSLEMGKIL- 88 (474)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 35677899999887777 88999999999999999999999999999999999999999999998876665432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+..+++.++++++..+. .+...+. . ..+...+++|+|+|||++|+|| ||. +.++++++
T Consensus 89 ---~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 155 (474)
T cd07130 89 ---PEG--------LGEVQEMIDICDFAVGLSRQLYGLTIPS-E-RPGHRMMEQWNPLGVVGVITAFNFPVAVWGWNAAI 155 (474)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHhHHHhcCccccC-C-CCCceEEEEEecceeEEEEccCCCHHHHHHHHhhH
Confidence 122 13455566666665543221 1222211 1 1233457789999999999997 796 56799999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.||+|+.++++++.+++.++ +|+|++|+|+++.++++.|..||+||+|+||||+++|+.|++.+.
T Consensus 156 ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~vd~V~fTGs~~~g~~i~~~aa 235 (474)
T cd07130 156 ALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQAVA 235 (474)
T ss_pred HHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCCCCEEEEECchHHHHHHHHHHH
Confidence 9999999999999999999999999999888889 999999999975557888889999999999999999999998763
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+|++||||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (474)
T cd07130 236 ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIY-DEVLERLKKAYKQVRIGDPLDDG 314 (474)
T ss_pred hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHH-HHHHHHHHHHHhcCCcCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999987532
Q ss_pred ---------------------------eE-ecCccc--cccc--c-C----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 ---------------------------GL-FGGPRA--SKLL--Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 ---------------------------~~-~g~~~~--~~~~--p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
++ +|+.+. .++| | | ++|++++||+||||++|++|+|+||||++
T Consensus 315 ~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~ 394 (474)
T cd07130 315 TLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSDAPIVKEETFAPILYVLKFDTLEEAIAW 394 (474)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCCCHHHhCCCcCCeEEEEEeCCHHHHHHH
Confidence 11 233321 1333 6 3 34889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhh--cCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~--l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+|+++|||++||||+|.+++++++++ +++|+|+||.++.. .+.+||||.|.||+|. ++|++|+++||+.|+|+
T Consensus 395 aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~f~~~k~~~ 470 (474)
T cd07130 395 NNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGTSGAEIGGAFGGEKETGGGR----ESGSDAWKQYMRRSTCT 470 (474)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCCCCCCCCCCcCccccccCCc----cchHHHHHHHhheEEEE
Confidence 99999999999999999999999987 99999999986543 4678999999999863 57999999999999988
Q ss_pred EcC
Q 008588 537 RGN 539 (560)
Q Consensus 537 ~~~ 539 (560)
+.+
T Consensus 471 ~~~ 473 (474)
T cd07130 471 INY 473 (474)
T ss_pred Eec
Confidence 754
No 16
>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=1.3e-77 Score=648.65 Aligned_cols=398 Identities=19% Similarity=0.196 Sum_probs=333.5
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 6 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 78 (457)
T PRK09406 6 INPATGETVKTFTALT------DDEVDAAIARAHARFRDYRTTTFAQRARWANAAADLLEAEADQVAALMTLEMGKTLA- 78 (457)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHH-
Confidence 4567899999988777 899999999999999999999999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
++. .|+...++.++++++..+ ..+..........+...+++|+|+|||++|+|| ||. +.++++++|
T Consensus 79 ---~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~PwN~Pl~~~~~~~~~A 147 (457)
T PRK09406 79 ---SAK--------AEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGVVLAVMPWNFPLWQVVRFAAPA 147 (457)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEecceeEEEECCccchHHHHHHHHHHH
Confidence 221 245555555555543221 111111100001223467889999999999998 796 568999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 347 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~- 347 (560)
|++||+||+|||+.||+++.++++++.+ + ||+|+||+|+++...+..|..||+|++|+||||+++|+.|++.++
T Consensus 148 LaaGN~VV~Kps~~~p~~~~~l~~l~~~----aGlP~gvv~~v~~g~~~~~~l~~~~~i~~V~fTGs~~~G~~i~~~a~~ 223 (457)
T PRK09406 148 LMAGNVGLLKHASNVPQTALYLADLFRR----AGFPDGCFQTLLVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAGD 223 (457)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCcCcEEEEcCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 999999999854334555668999999999999999999988774
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 348 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 348 --~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
||++||||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 224 ~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 302 (457)
T PRK09406 224 EIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVY-DAFAEKFVARMAALRVGDPTDPDT 302 (457)
T ss_pred cCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred --------------------------eE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 --------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 --------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
++ +|+.+. .++ + | | ++|.+++||+||||++|++|+|+||||++
T Consensus 303 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 382 (457)
T PRK09406 303 DVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFGPVASLYRVADIDEAIEI 382 (457)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCCCCCceEEEEeeCCHHHHHHH
Confidence 11 233321 233 3 5 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+|+++|||++||||+|.++++++++++++|+|+||+++...+..||||.|.||+|. ++|.+|+++||+.|+|++
T Consensus 383 ~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~ 456 (457)
T PRK09406 383 ANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTVSYPELPFGGVKRSGYGR----ELSAHGIREFCNIKTVWI 456 (457)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHhhceEEEEe
Confidence 99999999999999999999999999999999999977666778999999998863 568999999999999975
No 17
>PLN02278 succinic semialdehyde dehydrogenase
Probab=100.00 E-value=1.5e-77 Score=654.13 Aligned_cols=399 Identities=16% Similarity=0.178 Sum_probs=339.8
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.+.++.+|+.++++...+ ++|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 43 ~v~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 116 (498)
T PLN02278 43 PVYNPATGEVIANVPCMG------RAETNDAIASAHDAFPSWSKLTASERSKILRRWYDLIIANKEDLAQLMTLEQGKPL 116 (498)
T ss_pred EEECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 345778899999887777 89999999999999999999999999999999999999999999999887765442
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
. ++ ..|+...++.++++++..+ ..|...+.. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 117 ~----~a--------~~Ev~~~i~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~i~ 182 (498)
T PLN02278 117 K----EA--------IGEVAYGASFLEYFAEEAKRVYGDIIPSP--FPDRRLLVLKQPVGVVGAITPWNFPLAMITRKVG 182 (498)
T ss_pred H----HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEeecccEEEEECCCccHHHHHHHHHH
Confidence 1 22 1356667777776664332 223222211 1233456789999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
|||++||+||+|||+.||+++..+.+++.+ + +|+|+||+|++ ++++++.|..||+||+|+||||+++|+.|++.
T Consensus 183 ~ALaaGN~VVlKps~~tp~~~~~l~~~l~e----aglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~ 258 (498)
T PLN02278 183 PALAAGCTVVVKPSELTPLTALAAAELALQ----AGIPPGVLNVVMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAG 258 (498)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCcccEEEEecCChhhHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999887 6 99999999996 55678888899999999999999999999987
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
++ ||++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 259 aa~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~ 337 (498)
T PLN02278 259 AAATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIY-DKFAEAFSKAVQKLVVGDGFE 337 (498)
T ss_pred HhhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 74 8999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred -----------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ +||... .+ |+ | | ++|++++||+||||++|++|+|+|||
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FGPVl~v~~~~~~dea 417 (498)
T PLN02278 338 EGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFGPVAPLTRFKTEEEA 417 (498)
T ss_pred CCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcCCEEEEEeeCCHHHH
Confidence 11 233322 13 33 5 2 36889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
|+++|+++|||++||||+|.++++++++++++|+||||+.....+.+||||.+.||+|. ++|++|+++||+.|+|+
T Consensus 418 i~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~i~ 493 (498)
T PLN02278 418 IAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLISTEVAPFGGVKQSGLGR----EGSKYGIDEYLEIKYVC 493 (498)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHhheeEEEE
Confidence 99999999999999999999999999999999999999876555678999999999863 56999999999999998
Q ss_pred Ec
Q 008588 537 RG 538 (560)
Q Consensus 537 ~~ 538 (560)
++
T Consensus 494 ~~ 495 (498)
T PLN02278 494 LG 495 (498)
T ss_pred Ee
Confidence 64
No 18
>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional
Probab=100.00 E-value=1.6e-77 Score=648.82 Aligned_cols=396 Identities=16% Similarity=0.213 Sum_probs=334.4
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
..++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 11 ~~nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 83 (462)
T PRK13968 11 SVNPATGEQLSVLPWAG------ADDIENALQLAAAGFRDWRETNIDYRAQKLRDIGKALRARSEEMAQMITREMGKPI- 83 (462)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH-
Confidence 34677899999988887 89999999999999999999999999999999999999999999999887765542
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++. .|+...++.+++++...+ ..+..... ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 84 ---~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~PwN~P~~~~~~~~~~ 149 (462)
T PRK13968 84 ---NQAR--------AEVAKSANLCDWYAEHGPAMLKAEPTL---VENQQAVIEYRPLGTILAIMPWNFPLWQVMRGAVP 149 (462)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHHHHHhhCCcccc---CCCceEEEEEeccceEEEEcCCchHHHHHHHHHHH
Confidence 1221 255556666666554321 11111110 1233567889999999999998 796 56789999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.||+++.++++++.+ + +|+|++|+|++ +++.+. |..||+||+|+||||+++|++|++.+
T Consensus 150 ALaaGN~vv~KPs~~tp~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~-l~~~~~v~~V~fTGs~~~G~~i~~~a 224 (462)
T PRK13968 150 ILLAGNGYLLKHAPNVMGCAQLIAQVFKD----AGIPQGVYGWLNADNDGVSQ-MINDSRIAAVTVTGSVRAGAAIGAQA 224 (462)
T ss_pred HHHcCCEEEEECCCcChHHHHHHHHHHHH----cCcCcCcEEEEecCchhhHH-HhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 444455 55789999999999999999999887
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
.||++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||++|| |+|+++|+++++++++
T Consensus 225 a~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 303 (462)
T PRK13968 225 GAALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIA-SAFTERFVAAAAALKMGDPRDE 303 (462)
T ss_pred hhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHH-HHHHHHHHHHHhcCCcCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ----------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 417 ----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 417 ----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
++ +|+.+. .+ ++ | | ++|++++||+||||++|++|+|+||||
T Consensus 304 ~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~d~~eai 383 (462)
T PRK13968 304 ENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPVAAITVAKDAEHAL 383 (462)
T ss_pred CCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCEEEEEEECCHHHHH
Confidence 12 244321 13 33 5 2 357899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+|. ++|.+|+++||+.|+|++
T Consensus 384 ~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~~k~v~~ 459 (462)
T PRK13968 384 ELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYCASDARVAFGGVKKSGFGR----ELSHFGLHEFCNIQTVWK 459 (462)
T ss_pred HHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc----CchHHHHHHhcceeEEEE
Confidence 9999999999999999999999999999999999999876656678999999999863 579999999999999976
Q ss_pred c
Q 008588 538 G 538 (560)
Q Consensus 538 ~ 538 (560)
.
T Consensus 460 ~ 460 (462)
T PRK13968 460 D 460 (462)
T ss_pred e
Confidence 4
No 19
>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like. NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.
Probab=100.00 E-value=1.8e-77 Score=651.86 Aligned_cols=401 Identities=15% Similarity=0.141 Sum_probs=336.7
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
+.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|+++.++|++++++|.++..
T Consensus 19 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (477)
T cd07113 19 ITNPATEQVIASVASAT------EADVDAAVASAWRAFVSAWAKTTPAERGRILLRLADLIEQHGEELAQLETLCSGKSI 92 (477)
T ss_pred eeCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhHhhhccCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCH
Confidence 34667899999987777 89999999999999985 999999999999999999999999999999877665432
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccccc---CCCeeEEEeecceEEEEEEcCC-Chh-hHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL---ADGLILEKTSCPLGVLLIVFES-RPD-ALVQ 264 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~ 264 (560)
.++.. .|+...++.+++++++.+ ..+...+.... ..+...+++|+|+|||++|+|| ||. +.++
T Consensus 93 ----~~a~~-------~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 161 (477)
T cd07113 93 ----HLSRA-------FEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREPVGVVAGIVPWNFSVMIAVW 161 (477)
T ss_pred ----HHHHH-------HHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEEEeecceEEEEcCCChHHHHHHH
Confidence 12211 256666666666654332 12222110000 1123457889999999999998 796 5789
Q ss_pred HHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 265 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 265 ~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
+++|||++||+||+|||+.||+++.++++++.+ + +|+|+||+|++...+++.|..||+||+|+||||+++|+.|+
T Consensus 162 ~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~ 237 (477)
T cd07113 162 KIGAALATGCTIVIKPSEFTPLTLLRVAELAKE----AGIPDGVLNVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIG 237 (477)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 999999999999999999999999999999987 6 99999999996333788888999999999999999999999
Q ss_pred HhcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 344 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 344 ~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
+.+. ||+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 238 ~~aa~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p 316 (477)
T cd07113 238 RQAASDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKF-DELVTKLKQALSSFQVGSP 316 (477)
T ss_pred HHHHhhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 8773 9999999999999999999999999999999999987 999999999999999 6999999999877532
Q ss_pred -------------------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+.+. .++| | | ++|.+++||+||||++|++|+|+|
T Consensus 317 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~d 396 (477)
T cd07113 317 MDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREETFGPVVSFVPYEDEE 396 (477)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHHhCCCCCCeEEEEEeCCHH
Confidence 22 244322 2443 6 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||.++...+..||||.+.||+|. ++|.+|+++||+.|+
T Consensus 397 eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~ 472 (477)
T cd07113 397 ELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHTFLDPAVPFGGMKQSGIGR----EFGSAFIDDYTELKS 472 (477)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccCCc----cchHHHHHHhhceEE
Confidence 9999999999999999999999999999999999999999876666678999999999863 569999999999999
Q ss_pred EEEc
Q 008588 535 ILRG 538 (560)
Q Consensus 535 v~~~ 538 (560)
|+++
T Consensus 473 v~~~ 476 (477)
T cd07113 473 VMIR 476 (477)
T ss_pred EEEe
Confidence 9764
No 20
>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.
Probab=100.00 E-value=2.2e-77 Score=650.96 Aligned_cols=399 Identities=19% Similarity=0.176 Sum_probs=340.7
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||++|+++|.++|.++|++++++|++|.++|++++++|.+++.
T Consensus 20 v~~P~t~~~~~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (480)
T cd07559 20 NYNPVNGKVLCEIPRST------AEDVDLAVDAAHEAFKTWGKTSVAERANILNKIADRIEENLELLAVAETLDNGKPI- 92 (480)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 34667888899887777 89999999999999999999999999999999999999999999999877654432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++. ..|+...++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~ 159 (480)
T cd07559 93 ---RETL-------AADIPLAIDHFRYFAGVIRAQEGSLSEI---DEDTLSYHFHEPLGVVGQIIPWNFPLLMAAWKLAP 159 (480)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 2222 13566777777776654321 1222111 1234567889999999999998 696 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.||+++..+++++++ ++|+|++|+|++ +.++++.|..||+||+|+||||+.+|++|+++++
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----~lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (480)
T cd07559 160 ALAAGNTVVLKPASQTPLSILVLMELIGD----LLPKGVVNVVTGFGSEAGKPLASHPRIAKLAFTGSTTVGRLIMQYAA 235 (480)
T ss_pred HHHcCCEEEEECchhhhHHHHHHHHHHHH----hCCcCeEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 6678888889999999999999999999998874
Q ss_pred ---CCEEEecCccceEEEcCCC-----CHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--
Q 008588 348 ---IPVLGHADGICHVYVDKSA-----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dA-----Dld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 416 (560)
||++||||||||+||++|| |+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~ 314 (480)
T cd07559 236 ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIY-DEFIERAVERFEAIKVGN 314 (480)
T ss_pred ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCC
Confidence 8999999999999999999 999999999999999987 999999999999999 6999999999887632
Q ss_pred --------------------------------eE-ecCccc------cccc--c-C-----CCCCcccccccCceEEEEE
Q 008588 417 --------------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 417 --------------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~ 449 (560)
++ +|+.+. .++| | | ++|.+++||+||||++|++
T Consensus 315 p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~ 394 (480)
T cd07559 315 PLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRIFQEEIFGPVLAVIT 394 (480)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCCcHHhcCCcCceEEEEe
Confidence 12 243321 1333 5 2 3578999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcc
Q 008588 450 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 529 (560)
Q Consensus 450 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~f 529 (560)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+|. ++|.+|+++|
T Consensus 395 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~ 470 (480)
T cd07559 395 FKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYHQYPAHAPFGGYKKSGIGR----ETHKMMLDHY 470 (480)
T ss_pred eCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCCccCcCCc----cChHHHHHHh
Confidence 999999999999999999999999999999999999999999999876666788999999999873 5699999999
Q ss_pred eEEEEEEEcC
Q 008588 530 LTTRWILRGN 539 (560)
Q Consensus 530 t~~K~v~~~~ 539 (560)
|+.|+|++.+
T Consensus 471 ~~~k~v~~~~ 480 (480)
T cd07559 471 QQTKNILVSY 480 (480)
T ss_pred hceEEEEEeC
Confidence 9999998753
No 21
>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).
Probab=100.00 E-value=3.3e-77 Score=649.96 Aligned_cols=403 Identities=19% Similarity=0.225 Sum_probs=342.9
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 17 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 89 (478)
T cd07086 17 SRNPANGEPIARVFPAS------PEDVEAAVAAAREAFKEWRKVPAPRRGEIVRQIGEALRKKKEALGRLVSLEMGKIL- 89 (478)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 34677899999988877 88999999999999999999999999999999999999999999998876655432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..++..+++.++++++..+ ..+...+.. ..+...+++|+|+|||++|+|| ||. ++++++++
T Consensus 90 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ 156 (478)
T cd07086 90 ---PEG--------LGEVQEMIDICDYAVGLSRMLYGLTIPSE--RPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAI 156 (478)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceEEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 121 2356666666666654332 222222211 1233467889999999999998 796 67899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a- 346 (560)
||++||+||+|||+.||+|+..++++++++|.++ +|+|++|+|++...++++|..||+||+|+||||+++|+.|++.+
T Consensus 157 ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~vd~v~fTGs~~~g~~i~~~aa 236 (478)
T cd07086 157 ALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGSTEVGRRVGETVA 236 (478)
T ss_pred HHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999999999888 99999999996444888899999999999999999999998876
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 347 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 347 --~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|||||+++| |+|+++|+++++++.+
T Consensus 237 ~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 315 (478)
T cd07086 237 RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVY-DEFLERLVKAYKQVRIGDPLDEG 315 (478)
T ss_pred ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999887532
Q ss_pred ---------------------------eE-ecCccc----cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 ---------------------------GL-FGGPRA----SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 ---------------------------~~-~g~~~~----~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ +|+.+. .+ ++ | | ++|++++||+||||++|++|+|+|||
T Consensus 316 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPVl~v~~~~~~dea 395 (478)
T cd07086 316 TLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEA 395 (478)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhhcCCCcCCEEEEEEeCCHHHH
Confidence 22 244322 23 33 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhh--cCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQ--VDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~--l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
|+++|+++|||++||||+|.+++++++++ +++|+|+||+++.. .+.+||||.+.||+|. ++|.+|+++||+.|
T Consensus 396 i~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~~~~~~~PfgG~~~SG~G~----~~g~~~~~~f~~~k 471 (478)
T cd07086 396 IAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGGR----ESGSDAWKQYMRRS 471 (478)
T ss_pred HHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCCCCCCCCCCCCcccccCCc----cchHHHHHHhhceE
Confidence 99999999999999999999999999999 99999999987544 3578999999999863 56899999999999
Q ss_pred EEEEcC
Q 008588 534 WILRGN 539 (560)
Q Consensus 534 ~v~~~~ 539 (560)
+|++++
T Consensus 472 ~i~~~~ 477 (478)
T cd07086 472 TCTINY 477 (478)
T ss_pred EEEEeC
Confidence 998753
No 22
>PLN02466 aldehyde dehydrogenase family 2 member
Probab=100.00 E-value=2.6e-77 Score=655.29 Aligned_cols=399 Identities=17% Similarity=0.183 Sum_probs=338.4
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
..++.+|+.++++...+ .+|+++|+++|++||+. |++++.++|.++|++++++|++|.++|++++++|.++.
T Consensus 77 v~~P~tg~~i~~v~~~~------~~dv~~Av~aA~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~ 150 (538)
T PLN02466 77 TLDPRTGEVIAHVAEGD------AEDVNRAVAAARKAFDEGPWPKMTAYERSRILLRFADLLEKHNDELAALETWDNGKP 150 (538)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCcCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 34667889999987777 89999999999999984 99999999999999999999999999999987766543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.. ++. ..|+...++.+++++.+.+ ..+...+. ..+...+++++|+|||++|+|| ||+ +.++++
T Consensus 151 ~~----~a~-------~~Ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~l~~~~i 216 (538)
T PLN02466 151 YE----QSA-------KAELPMFARLFRYYAGWADKIHGLTVPA---DGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 216 (538)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceEEEEECCCchHHHHHHHHH
Confidence 21 221 1356667777777765432 22322221 1223457889999999999998 696 568999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.||+++.++++++++ + ||+|+||+|++ ++++++.|..||+||+|+||||+++|+.|++
T Consensus 217 ~pALaaGN~VVlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~FTGS~~~G~~v~~ 292 (538)
T PLN02466 217 GPALACGNTIVLKTAEQTPLSALYAAKLLHE----AGLPPGVLNVVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLE 292 (538)
T ss_pred hHHHHcCCEEEeECCCCCcHHHHHHHHHHHh----cCCCcccEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 6678888989999999999999999999987
Q ss_pred hcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 345 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 345 ~a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
.++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|++++.++.+
T Consensus 293 ~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~vG~p 371 (538)
T PLN02466 293 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVY-DEFVEKAKARALKRVVGDP 371 (538)
T ss_pred HHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHH-HHHHHHHHHHHHhccCCCC
Confidence 663 7999999999999999999999999999999999987 999999999999999 6999999987765421
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+.+. .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 372 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FGPVl~v~~~~d~d 451 (538)
T PLN02466 372 FKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFGPVQSILKFKDLD 451 (538)
T ss_pred ccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccCcEEEEEEeCCHH
Confidence 11 233321 13 33 5 2 368999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+........||||.|.||+|. ++|++|+++||+.|+
T Consensus 452 eAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~PfGG~k~SG~G~----~~G~~gl~~ft~~k~ 527 (538)
T PLN02466 452 EVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFDVFDAAIPFGGYKMSGIGR----EKGIYSLNNYLQVKA 527 (538)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCCCcCccCc----ccHHHHHHHhcceEE
Confidence 9999999999999999999999999999999999999999876666678999999999863 569999999999999
Q ss_pred EEEcC
Q 008588 535 ILRGN 539 (560)
Q Consensus 535 v~~~~ 539 (560)
|++..
T Consensus 528 v~~~~ 532 (538)
T PLN02466 528 VVTPL 532 (538)
T ss_pred EEEeC
Confidence 98753
No 23
>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like. Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.
Probab=100.00 E-value=5.6e-77 Score=648.35 Aligned_cols=398 Identities=18% Similarity=0.161 Sum_probs=337.3
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++|.++|+++++.|.++..
T Consensus 20 v~nP~tg~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (479)
T cd07116 20 NITPVTGKVFCEVPRST------AEDIELALDAAHAAKEAWGKTSVAERANILNKIADRMEANLEMLAVAETWDNGKPV- 92 (479)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 45678899999987777 89999999999999999999999999999999999999999999998876654331
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++. ..|+...++.++++++..+. .+...+. ..+...+++++|+|||++|+|| ||. +.+++++|
T Consensus 93 ---~~a~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (479)
T cd07116 93 ---RETL-------AADIPLAIDHFRYFAGCIRAQEGSISEI---DENTVAYHFHEPLGVVGQIIPWNFPLLMATWKLAP 159 (479)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHhHHHcCCeeecC---CCCceEEEEEeccceEEEECCCchHHHHHHHHHHH
Confidence 1221 13677788888887754322 2222111 1234567889999999999998 796 45799999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.||+++..+++++++ ++|+|++|+|+| +.++++.|..||+||+|+||||+++|+.|++.+.
T Consensus 160 ALaaGN~VV~KPs~~tp~~~~~l~~l~~~----alP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 235 (479)
T cd07116 160 ALAAGNCVVLKPAEQTPASILVLMELIGD----LLPPGVVNVVNGFGLEAGKPLASSKRIAKVAFTGETTTGRLIMQYAS 235 (479)
T ss_pred HHHcCCEEEEECCCCChHHHHHHHHHHHH----HCCcCcEEEEecCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHH
Confidence 99999999999999999999999999986 499999999996 6678888888999999999999999999998773
Q ss_pred ---CCEEEecCccceEEEcCC------CCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-
Q 008588 348 ---IPVLGHADGICHVYVDKS------ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~d------ADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~- 416 (560)
||++||||||||+||++| ||+|.|++.++++.| |+| +|+|++|||||+++| |+|+++|+++++++.+
T Consensus 236 ~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~~-~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G 313 (479)
T cd07116 236 ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFAL-NQGEVCTCPSRALIQESIY-DRFMERALERVKAIKQG 313 (479)
T ss_pred cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHHh-cCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 899999999999999998 799999999999765 555 999999999999999 6999999999887521
Q ss_pred ---------------------------------eE-ecCccc------ccc-c-c-C----CCCCcccccccCceEEEEE
Q 008588 417 ---------------------------------GL-FGGPRA------SKL-L-Q-I----PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 417 ---------------------------------~~-~g~~~~------~~~-~-p-v----~~~~~~~eE~FGPVl~v~~ 449 (560)
++ .|+... .++ + | | ++|.+++||+||||++|++
T Consensus 314 ~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~eE~FGPVl~v~~ 393 (479)
T cd07116 314 NPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGNKMRIFQEEIFGPVLAVTT 393 (479)
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCCCChhhhcCCcCceEEEEE
Confidence 22 244321 233 3 5 2 4688999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcc
Q 008588 450 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 529 (560)
Q Consensus 450 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~f 529 (560)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.+.||+|+ ++|.+|+++|
T Consensus 394 ~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~ 469 (479)
T cd07116 394 FKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYHLYPAHAAFGGYKQSGIGR----ENHKMMLDHY 469 (479)
T ss_pred eCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCCccCcCCc----cChHHHHHHh
Confidence 999999999999999999999999999999999999999999999877666778999999999863 5699999999
Q ss_pred eEEEEEEEcC
Q 008588 530 LTTRWILRGN 539 (560)
Q Consensus 530 t~~K~v~~~~ 539 (560)
|+.|+|++++
T Consensus 470 ~~~k~~~~~~ 479 (479)
T cd07116 470 QQTKNLLVSY 479 (479)
T ss_pred hceEEEEEeC
Confidence 9999998743
No 24
>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like. Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.
Probab=100.00 E-value=5e-77 Score=646.98 Aligned_cols=398 Identities=17% Similarity=0.179 Sum_probs=339.9
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
..++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 20 ~~nP~t~~~i~~~~~~~------~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 92 (475)
T cd07117 20 SYNPANGETLSEITDAT------DADVDRAVKAAQEAFKTWRKTTVAERANILNKIADIIDENKELLAMVETLDNGKPI- 92 (475)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCH-
Confidence 34677889999888777 89999999999999999999999999999999999999999999998876654432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++. ..|+..+++.+++++...+ ..++..+. ..+...+++|+|+|||++|+|| ||. +++++++|
T Consensus 93 ---~~a~-------~~ev~~~i~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~Pl~~~~~~i~~ 159 (475)
T cd07117 93 ---RETR-------AVDIPLAADHFRYFAGVIRAEEGSANMI---DEDTLSIVLREPIGVVGQIIPWNFPFLMAAWKLAP 159 (475)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceeEEEEeecceEEEECCCccHHHHHHHHHHH
Confidence 1221 1367777888887765332 22322211 1233457889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.||+++..+++++++ ++|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++++.
T Consensus 160 AL~aGN~VvlKPs~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 235 (475)
T cd07117 160 ALAAGNTVVIKPSSTTSLSLLELAKIIQD----VLPKGVVNIVTGKGSKSGEYLLNHPGLDKLAFTGSTEVGRDVAIAAA 235 (475)
T ss_pred HHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999986 499999999996 6677888888999999999999999999998773
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 314 (475)
T cd07117 236 KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIY-DEFVAKLKEKFENVKVGNPLDPD 314 (475)
T ss_pred ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ---------------------------eE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 ---------------------------GL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 ---------------------------~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .+ ++ | | ++|++++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 394 (475)
T cd07117 315 TQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEIFGPVATVIKFKTED 394 (475)
T ss_pred CcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhCCCcCCeEEEEEECCHH
Confidence 12 233321 13 33 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.+++.++++++++|+|+||+.+...+.+||||.|.||+|. ++|.+|+++||+.|+
T Consensus 395 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~ 470 (475)
T cd07117 395 EVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYNQIPAGAPFGGYKKSGIGR----ETHKSMLDAYTQMKN 470 (475)
T ss_pred HHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCC----CchHHHHHHHhCeEE
Confidence 9999999999999999999999999999999999999999976666778999999999873 579999999999999
Q ss_pred EEEc
Q 008588 535 ILRG 538 (560)
Q Consensus 535 v~~~ 538 (560)
|++.
T Consensus 471 v~~~ 474 (475)
T cd07117 471 IYID 474 (475)
T ss_pred EEEe
Confidence 9763
No 25
>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.
Probab=100.00 E-value=6.1e-77 Score=647.13 Aligned_cols=401 Identities=15% Similarity=0.190 Sum_probs=337.9
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
+.++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|.++|++++++|.+++
T Consensus 25 ~~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 98 (486)
T cd07140 25 TINPTDGSVICKVSLAT------VEDVDRAVAAAKEAFENGEWGKMNARDRGRLMYRLADLMEEHQEELATIESLDSGAV 98 (486)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCchhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCc
Confidence 35677899999888887 8999999999999998 599999999999999999999999999999987666543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccc-cCCCeeEEEeecceEEEEEEcCC-Chh-hHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 265 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 265 (560)
. .++. ..|+...++.+++++.+.+ ..+...+... .+.+...+++|+|+|||++|+|| ||. +.+++
T Consensus 99 ~----~~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P~GVv~~I~PwN~P~~~~~~~ 167 (486)
T cd07140 99 Y----TLAL-------KTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREPIGVCGIVIPWNYPLMMLAWK 167 (486)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeeccceEEEEcCCchHHHHHHHH
Confidence 2 1221 1355666666666654332 1222221110 01222356889999999999998 796 57899
Q ss_pred HHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 266 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 266 ~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
++|||++||+||+|||+.||+++..+++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+++|+.|+
T Consensus 168 i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~ 243 (486)
T cd07140 168 MAACLAAGNTVVLKPAQVTPLTALKFAELTVK----AGFPKGVINILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIM 243 (486)
T ss_pred HHHHHHhCCEEEEECCccCcHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999886 6 99999999996 667888888999999999999999999999
Q ss_pred HhcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--
Q 008588 344 ESTK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 416 (560)
Q Consensus 344 ~~a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 416 (560)
++|. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 244 ~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~-~~f~~~l~~~~~~l~~g~ 322 (486)
T cd07140 244 KSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIH-DEFVRRVVEEVKKMKIGD 322 (486)
T ss_pred HHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhCCccC
Confidence 8773 7999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred --------------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeC--
Q 008588 417 --------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVD-- 451 (560)
Q Consensus 417 --------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~-- 451 (560)
++ +||.+. .+ ++ | | ++|.+++||+||||++|++|+
T Consensus 323 p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~ 402 (486)
T cd07140 323 PLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKEESFGPIMIISKFDDG 402 (486)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhCCCCCCeEEEEEcCCC
Confidence 12 244321 23 33 5 3 368999999999999999998
Q ss_pred CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceE
Q 008588 452 DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLT 531 (560)
Q Consensus 452 ~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~ 531 (560)
|+||||+++|+++|||++||||+|..+++++++++++|.||||+........||||.+.||+|. ++|.+|+++||+
T Consensus 403 ~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft~ 478 (486)
T cd07140 403 DVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEEALNEYLK 478 (486)
T ss_pred CHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCC----cchHHHHHHhhc
Confidence 6999999999999999999999999999999999999999999976666678999999999863 569999999999
Q ss_pred EEEEEEc
Q 008588 532 TRWILRG 538 (560)
Q Consensus 532 ~K~v~~~ 538 (560)
.|+|++.
T Consensus 479 ~k~v~~~ 485 (486)
T cd07140 479 TKTVTIE 485 (486)
T ss_pred EEEEEEe
Confidence 9999864
No 26
>PRK13252 betaine aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=7.9e-77 Score=648.56 Aligned_cols=399 Identities=16% Similarity=0.175 Sum_probs=338.8
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
..++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 26 ~~nP~tg~~i~~~~~~~------~~dv~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 98 (488)
T PRK13252 26 VINPATGEVLATVQAAT------PADVEAAVASAKQGQKIWAAMTAMERSRILRRAVDILRERNDELAALETLDTGKPI- 98 (488)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH-
Confidence 35677899999988777 89999999999999999999999999999999999999999999999887765442
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++. ..|+...++.++++++..+. .+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 99 ---~~a~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~PlGVv~~I~p~N~P~~~~~~~~~~ 165 (488)
T PRK13252 99 ---QETS-------VVDIVTGADVLEYYAGLAPALEGEQIPL---RGGSFVYTRREPLGVCAGIGAWNYPIQIACWKSAP 165 (488)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhcCceecc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 1221 12555666667766654321 2322211 1233467889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.+|+|+..+++++++ + +|+|+||+|++...+++.|..||+||+|+||||+++|+.|++++.
T Consensus 166 ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~----aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~aa 241 (488)
T PRK13252 166 ALAAGNAMIFKPSEVTPLTALKLAEIYTE----AGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAA 241 (488)
T ss_pred HHhcCCeEEEeCCccCcHHHHHHHHHHHH----cCcCcccEEEEecCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 99999999999999999999999999987 7 999999999964448888889999999999999999999998773
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+|++||||||||+||++|||+|.|++.+++++|.|+| +|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 242 ~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 320 (488)
T PRK13252 242 ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIK-AAFEARLLERVERIRIGDPMDPA 320 (488)
T ss_pred hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 6999999999886521
Q ss_pred ---------------------------eE-ecCccc------ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 ---------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 ---------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+.+. .++ + | | ++|++++||+||||++|++|+|+|
T Consensus 321 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~ 400 (488)
T PRK13252 321 TNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREEIFGPVMSVLTFDDED 400 (488)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCCCCCceEEEEeeCCHH
Confidence 22 244321 133 3 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.+.||+|. ++|.+|+++||+.|+
T Consensus 401 eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~ 476 (488)
T PRK13252 401 EVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWGESPAEMPVGGYKQSGIGR----ENGIATLEHYTQIKS 476 (488)
T ss_pred HHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCccCcCCc----CChHHHHHHhcceEE
Confidence 9999999999999999999999999999999999999999866555678999999999863 569999999999999
Q ss_pred EEEcC
Q 008588 535 ILRGN 539 (560)
Q Consensus 535 v~~~~ 539 (560)
|++.+
T Consensus 477 i~~~~ 481 (488)
T PRK13252 477 VQVEM 481 (488)
T ss_pred EEEeC
Confidence 98753
No 27
>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase. Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.
Probab=100.00 E-value=8.5e-77 Score=647.22 Aligned_cols=401 Identities=17% Similarity=0.182 Sum_probs=338.2
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
..++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.+||++++++|++++.
T Consensus 18 ~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 91 (481)
T TIGR03216 18 NINPVDGRVIARVHEAG------AAEVDAAVAAARAALKGPWGKMTVAERADLLYAVADEIERRFDDFLAAEVADTGKPR 91 (481)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhHhhHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 34667899999988777 89999999999999997 999999999999999999999999999999887765442
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccccc-CCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL-ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
. ++. ..|+..+++.++++++..+ ..+...+.... ..+...+.+|+|+|||++|+|| ||. +.++++
T Consensus 92 ~----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~Pl~~~~~~~ 160 (481)
T TIGR03216 92 S----LAS-------HLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKPLGVVGVISPWNLPLLLMTWKV 160 (481)
T ss_pred H----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEeccceEEEECCCCcHHHHHHHHH
Confidence 1 111 1245556666666654322 11211110000 1123457889999999999998 796 568999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-Cc-hhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-RE-EIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~-~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
+|||++||+||+|||+.||+|+.++++++.+ + +|+|++|+|+| +. +++++|..||+||+|+||||+.+|+.|+
T Consensus 161 ~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~----aglP~g~~~~v~g~~~~~~~~~l~~~~~vd~v~fTGS~~~G~~i~ 236 (481)
T TIGR03216 161 GPALACGNTVVVKPSEETPGTATLLGEVMNA----VGVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIM 236 (481)
T ss_pred HHHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcCceEEEecCChhHHHHHHhcCCCCCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 43 5789899999999999999999999999
Q ss_pred HhcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 344 ESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 344 ~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
++++ ||++||||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~~aa~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p 315 (481)
T TIGR03216 237 KAAADGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIF-DRFVAALKARAESLKIGVP 315 (481)
T ss_pred HHHhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 8873 8999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred -------------------------------eE-ecCccc-------cccc--c-C-----CCCCcccccccCceEEEEE
Q 008588 417 -------------------------------GL-FGGPRA-------SKLL--Q-I-----PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 417 -------------------------------~~-~g~~~~-------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~ 449 (560)
++ +||... .++| | | ++|++++||+||||++|++
T Consensus 316 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FgPvl~V~~ 395 (481)
T TIGR03216 316 DDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDSARVVTEEIFGPCCHIAP 395 (481)
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCCCHHHhCCCCCceEEEEE
Confidence 11 243321 2333 5 2 3689999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcc
Q 008588 450 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 529 (560)
Q Consensus 450 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~f 529 (560)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+|. ++|.+|+++|
T Consensus 396 ~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~f 471 (481)
T TIGR03216 396 FDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFLRDLRTPFGGSKLSGIGR----EGGVHSLEFY 471 (481)
T ss_pred eCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCc----CchHHHHHHh
Confidence 999999999999999999999999999999999999999999999877666678999999999863 5699999999
Q ss_pred eEEEEEEEc
Q 008588 530 LTTRWILRG 538 (560)
Q Consensus 530 t~~K~v~~~ 538 (560)
|+.|+|+++
T Consensus 472 ~~~k~v~~~ 480 (481)
T TIGR03216 472 TELTNVCIK 480 (481)
T ss_pred hceEEEEEe
Confidence 999999764
No 28
>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like. Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.
Probab=100.00 E-value=1.3e-76 Score=642.24 Aligned_cols=395 Identities=16% Similarity=0.168 Sum_probs=335.3
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++.
T Consensus 3 ~p~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 73 (456)
T cd07107 3 NPATGQVLARVPAAS------AADVDRAVAAARAAFPEWRATTPLERARMLRELATRLREHAEELALIDALDCGNPV--- 73 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH---
Confidence 467889999987777 89999999999999999999999999999999999999999999998877664432
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
.++ ..|+...++.++++++..+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||
T Consensus 74 -~~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 141 (456)
T cd07107 74 -SAM--------LGDVMVAAALLDYFAGLVTELKGETIPV---GGRNLHYTLREPYGVVARIVAFNHPLMFAAAKIAAPL 141 (456)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEecceEEEEECCcccHHHHHHHHHhHHH
Confidence 121 2355566666666554322 12222221 1233467889999999999998 796 5679999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc---
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST--- 346 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a--- 346 (560)
++||+||+|||+.||+++..+++++++ ++|+|+||+|++ +.++++.|..||++++|+||||+++|+.|++++
T Consensus 142 aaGN~VV~Kps~~~p~~~~~l~~~~~~----~lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~ 217 (456)
T cd07107 142 AAGNTVVVKPPEQAPLSALRLAELARE----VLPPGVFNILPGDGATAGAALVRHPDVKRIALIGSVPTGRAIMRAAAEG 217 (456)
T ss_pred HcCCEEEEeCCCCChHHHHHHHHHHHH----hCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcC
Confidence 999999999999999999999999986 499999999995 555778888899999999999999999999887
Q ss_pred CCCEEEecCccceEEEcCCCCHHHHHHHHHhhc-CCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 347 KIPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 347 ~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~-f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
.+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|+|++|||||+++| |+|+++|+++++++..
T Consensus 218 ~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~~ 296 (456)
T cd07107 218 IKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIY-DEVLARVVERVAAIKVGDPTDPAT 296 (456)
T ss_pred CCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 389999999999999999999999999999995 88776 999999999999999 6999999999886521
Q ss_pred --------------------------eE-ecCccc------cccc--c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 --------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 --------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +||... .++| | | ++|++++||+||||++|++|+|+||
T Consensus 297 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~i~~~~~~~e 376 (456)
T cd07107 297 TMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREEIFGPVLSVLRWRDEAE 376 (456)
T ss_pred CcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhhCCCCCceEEEEeeCCHHH
Confidence 12 244221 1333 5 2 3689999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
||+++|+++|||++||||+|.++++++++++++|.|+||+++...+.+||||.|+||+|. ++|++|+++||+.|+|
T Consensus 377 ai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~~~~~k~v 452 (456)
T cd07107 377 MVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSRHFLGAPFGGVKNSGIGR----EECLEELLSYTQEKNV 452 (456)
T ss_pred HHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCc----CchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999987767788999999999873 5699999999999999
Q ss_pred EEc
Q 008588 536 LRG 538 (560)
Q Consensus 536 ~~~ 538 (560)
+++
T Consensus 453 ~~~ 455 (456)
T cd07107 453 NVR 455 (456)
T ss_pred EEe
Confidence 864
No 29
>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like. Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.
Probab=100.00 E-value=1.1e-76 Score=645.62 Aligned_cols=396 Identities=18% Similarity=0.193 Sum_probs=336.9
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
+.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|++++
T Consensus 23 v~~P~t~~~i~~v~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07142 23 TIDPRNGEVIAHVAEGD------AEDVDRAVKAARKAFDEGPWPRMTGYERSRILLRFADLLEKHADELAALETWDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHhcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Confidence 34667899999987777 89999999999999975 99999999999999999999999999999987776544
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.. ++. ..|+...++.+++++.+.+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 97 ~~----~a~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i 162 (476)
T cd07142 97 YE----QAR-------YAEVPLAARLFRYYAGWADKIHGMTLPA---DGPHHVYTLHEPIGVVGQIIPWNFPLLMFAWKV 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeceeeEEEECCCccHHHHHHHHH
Confidence 21 211 1256667777777765433 22322221 1123457889999999999998 796 467999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.||+++..+++++.+ + +|+|+||+|++ ++++++.|..||+||+|+||||+++|+.|++
T Consensus 163 ~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~G~~v~~ 238 (476)
T cd07142 163 GPALACGNTIVLKPAEQTPLSALLAAKLAAE----AGLPDGVLNIVTGFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQ 238 (476)
T ss_pred HHHHHcCCEEEEECCCcccHHHHHHHHHHHH----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 6668888999999999999999999999998
Q ss_pred hcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC----
Q 008588 345 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG---- 415 (560)
Q Consensus 345 ~a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~---- 415 (560)
.++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.
T Consensus 239 ~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 317 (476)
T cd07142 239 LAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIY-DEFVEKAKARALKRVVGDP 317 (476)
T ss_pred HHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHH-HHHHHHHHHHHHhcCCCCC
Confidence 763 7999999999999999999999999999999999977 999999999999999 699999999887642
Q ss_pred ------------------------------CeE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 416 ------------------------------VGL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 416 ------------------------------~~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
.++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07142 318 FRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFGPVQSILKFKTVD 397 (476)
T ss_pred CCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccCceEEEEeeCCHH
Confidence 122 233321 23 33 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.|.||+|. ++|.+|+++||+.|+
T Consensus 398 eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~ 473 (476)
T cd07142 398 EVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYDVFDASIPFGGYKMSGIGR----EKGIYALNNYLQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHhhheeE
Confidence 9999999999999999999999999999999999999999877666778999999999863 569999999999999
Q ss_pred EE
Q 008588 535 IL 536 (560)
Q Consensus 535 v~ 536 (560)
|+
T Consensus 474 v~ 475 (476)
T cd07142 474 VV 475 (476)
T ss_pred Ee
Confidence 85
No 30
>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=2.4e-76 Score=639.42 Aligned_cols=398 Identities=18% Similarity=0.199 Sum_probs=330.5
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHH-hhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL-QALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w-~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++.+|+.++++...+ ++|+++++++|++||+.| +.+|.++|.++|++++++|+++.++|++++.+|++++.
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 76 (455)
T cd07148 4 VNPFDLKPIGEVPTVD------WAAIDKALDTAHALFLDRNNWLPAHERIAILERLADLMEERADELALLIAREGGKPL- 76 (455)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 4567899999988887 899999999999999984 67999999999999999999999999998877665432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.++. .|+...++.++++++..+ ..+...+.. ....+...+++|+|+|||++|+|| ||. +.++++
T Consensus 77 ---~~a~--------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~ 145 (455)
T cd07148 77 ---VDAK--------VEVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTTREPIGVVVAISAFNHPLNLIVHQV 145 (455)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEecceEEEEECCCCcHHHHHHHHH
Confidence 1221 234444444444432211 111111100 001234567889999999999998 785 568999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
++||++||+||+|||+.||+++.++++++++ + +|+|+||+|+++.+.++.|..||+||+|+||||+++|+.|+++
T Consensus 146 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~v~fTGs~~~G~~i~~~ 221 (455)
T cd07148 146 APAIAAGCPVIVKPALATPLSCLAFVDLLHE----AGLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLRSK 221 (455)
T ss_pred HHHHHcCCEEEeeCCCcccHHHHHHHHHHHH----cCCCcCcEEEEeCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 9999999999999999999999999999987 6 9999999999655578888889999999999999999999887
Q ss_pred cC--CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 346 TK--IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 346 a~--~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 222 aa~~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 300 (455)
T cd07148 222 LAPGTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIA-DDFAQRLAAAAEKLVVGDPTDP 300 (455)
T ss_pred hhcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHH-HHHHHHHHHHHhcCCCCCCCCC
Confidence 63 8999999999999999999999999999999999977 999999999999999 6999999999887632
Q ss_pred ----------------------------eE-ecCcccccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 ----------------------------GL-FGGPRASKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 ----------------------------~~-~g~~~~~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
++ +|+.+..+. + | | ++|++++||+||||++|++|+|+||||++
T Consensus 301 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~ 380 (455)
T cd07148 301 DTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTVLLDPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQ 380 (455)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEEEeCCCCCCHHHhCCCcCCeEEEEecCCHHHHHHH
Confidence 12 233322222 3 5 3 36889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+|+++|||++||||+|.+++.+|++++++|+|+||+++... +..||||.|.||+|. ++|.+|+++||+.|++++
T Consensus 381 ~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~~~~ 455 (455)
T cd07148 381 ANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHTAFRVDWMPFAGRRQSGYGT----GGIPYTMHDMTQEKMAVI 455 (455)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCCCcchhcccCC----CchHHHHHHhhceeEEeC
Confidence 99999999999999999999999999999999999876443 457999999999873 568999999999999863
No 31
>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.
Probab=100.00 E-value=3.6e-76 Score=642.18 Aligned_cols=400 Identities=18% Similarity=0.186 Sum_probs=337.3
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|.+++..
T Consensus 20 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ 93 (478)
T cd07085 20 VYNPATGEVIARVPLAT------AEEVDAAVAAAKAAFPAWSATPVLKRQQVMFKFRQLLEENLDELARLITLEHGKTLA 93 (478)
T ss_pred eeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 34667899999988777 899999999999999999999999999999999999999999999998776654421
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
++ ..|+...++.+++++...+ ..++..+.. ..+...+.+++|+|||++|+|| ||. +..++++|
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~i~~ 159 (478)
T cd07085 94 ----DA--------RGDVLRGLEVVEFACSIPHLLKGEYLENV--ARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPM 159 (478)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCeecccC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHH
Confidence 22 2356666666666654322 123222110 1233467889999999999998 696 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
||++||+||+|||+.||+++..+++++++ + +|+|+||+|+++.+.++.|..||+||+|+||||+++|+.|++++.
T Consensus 160 ALaaGN~VvlKps~~tp~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa 235 (478)
T cd07085 160 AIACGNTFVLKPSERVPGAAMRLAELLQE----AGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYERAA 235 (478)
T ss_pred HHhcCCEEEEECCCcCcHHHHHHHHHHHH----hCCCCCcEEEEecCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999987 6 999999999965556777888999999999999999999988774
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
||+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 236 ~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~L~~~~~~l~~G~p~~~~ 314 (478)
T cd07085 236 ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEA-DEWIPKLVERAKKLKVGAGDDPG 314 (478)
T ss_pred hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999886632
Q ss_pred ---------------------------eE-ecCcc------ccccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 ---------------------------GL-FGGPR------ASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 ---------------------------~~-~g~~~------~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+.. ..++| | | ++|.+++||+||||++|++|+|+|
T Consensus 315 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 394 (478)
T cd07085 315 ADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLD 394 (478)
T ss_pred CCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhCcCcCCeEEEEEeCCHH
Confidence 22 23322 12333 6 3 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++... +.+||||.|.||+|. .+++|.+|+++||+.|
T Consensus 395 eai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfgG~k~SG~G~--~~~~g~~~~~~~~~~k 472 (478)
T cd07085 395 EAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPIPVPLAFFSFGGWKGSFFGD--LHFYGKDGVRFYTQTK 472 (478)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCcccccCCC--CcCChHHHHHHhcceE
Confidence 9999999999999999999999999999999999999999875443 467999999999862 2356999999999999
Q ss_pred EEEEc
Q 008588 534 WILRG 538 (560)
Q Consensus 534 ~v~~~ 538 (560)
+|+++
T Consensus 473 ~v~~~ 477 (478)
T cd07085 473 TVTSR 477 (478)
T ss_pred EEEEe
Confidence 99764
No 32
>TIGR01780 SSADH succinate-semialdehyde dehydrogenase. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).
Probab=100.00 E-value=1.9e-76 Score=639.35 Aligned_cols=391 Identities=16% Similarity=0.174 Sum_probs=333.8
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++.+|.+++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (448)
T TIGR01780 3 NPATGEIIGTVPDQG------VEEAEAAIRAAYEAFKTWKNTTAKERSSLLRKWYNLMMENKDDLARLITLENGKPLK-- 74 (448)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 567899999988777 899999999999999999999999999999999999999999999988766544321
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~AL 270 (560)
++ ..|+...++.+++++...+ ..+...+.. ..+...+.+|+|+|||++|+|| ||.+ .+++++|||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL 142 (448)
T TIGR01780 75 --EA--------KGEILYAASFLEWFAEEAKRVYGDTIPSP--QSDKRLLVIKQPVGVCAAITPWNFPAAMITRKAGAAL 142 (448)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEeeeeEEEEEcCCChHHHHHHHHHHHHH
Confidence 21 2466777777777664322 223222211 1234456789999999999997 7964 579999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC--CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
++||+||+|||+.+|+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|++|++.+.
T Consensus 143 aaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~aa 218 (448)
T TIGR01780 143 AAGCTVVVKPAEQTPLSALALARLAEQ----AGIPKGVLNVITGSRAKEVGKVLCTSPLVRKISFTGSTNVGKILMKQSA 218 (448)
T ss_pred HcCCeEeeECCccchHHHHHHHHHHHH----cCCCccceEEEeCCCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 999999999999999999999999986 7 99999999995 4677888889999999999999999999998773
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
||++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~~ 297 (448)
T TIGR01780 219 STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIY-DEFAKKLAEAVKKLKVGNGLDEG 297 (448)
T ss_pred hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred ---------------------------eE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 008588 417 ---------------------------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 458 (560)
Q Consensus 417 ---------------------------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 458 (560)
++ +|+... .++ + | | ++|++++||+||||++|++|+|+||||+
T Consensus 298 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~ 377 (448)
T TIGR01780 298 VTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEETFGPLAPVFKFDDEEEVIA 377 (448)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 244322 233 3 6 2 3689999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 459 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 459 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
++|+++|||++||||+|.++++++++++++|.||||++....+..||||.|.||+|. ++|.+|+++||+.|
T Consensus 378 ~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~~~~k 448 (448)
T TIGR01780 378 IANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLISNVVAPFGGVKQSGLGR----EGSKYGIEEYLETK 448 (448)
T ss_pred HHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCcccccCCc----cchHHHHHHHhccC
Confidence 999999999999999999999999999999999999977666678999999999863 56999999999875
No 33
>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like. Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.
Probab=100.00 E-value=4.9e-76 Score=636.31 Aligned_cols=392 Identities=19% Similarity=0.186 Sum_probs=337.7
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|++++..+|.++|++++++|++|.++|++++.+|++++.
T Consensus 3 ~P~tg~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~--- 73 (446)
T cd07106 3 NPATGEVFASAPVAS------EAQLDQAVAAAKAAFPGWSATPLEERRAALLAIADAIEANAEELARLLTLEQGKPL--- 73 (446)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 467889999987777 89999999999999999999999999999999999999999999998876654332
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIR 271 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALa 271 (560)
.++ ..|+..+++.++++++.... +...+. ..+...+.+++|+|||++|+|| ||. +.+++++|||+
T Consensus 74 -~~a--------~~ev~~~~~~l~~~~~~~~~-~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALa 140 (446)
T cd07106 74 -AEA--------QFEVGGAVAWLRYTASLDLP-DEVIED---DDTRRVELRRKPLGVVAAIVPWNFPLLLAAWKIAPALL 140 (446)
T ss_pred -HHH--------HHHHHHHHHHHHHHHhhhhc-CccccC---CCCceEEEEEEcceEEEEEcCCChHHHHHHHHHHHHHH
Confidence 111 24677788888887754321 111111 1234567889999999999998 696 56899999999
Q ss_pred hCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---C
Q 008588 272 SGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---I 348 (560)
Q Consensus 272 aGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~ 348 (560)
+||+||+|||+++|+|+.++++++++ ++|+|++|+|+++.+++..|..||++|+|+||||+++|+.|++++. +
T Consensus 141 aGN~VilKps~~~p~~~~~l~~~~~~----~lP~g~~~~v~g~~~~~~~l~~~~~vd~V~fTGs~~~g~~v~~~aa~~~~ 216 (446)
T cd07106 141 AGNTVVLKPSPFTPLCTLKLGELAQE----VLPPGVLNVVSGGDELGPALTSHPDIRKISFTGSTATGKKVMASAAKTLK 216 (446)
T ss_pred cCCEEEEECCccchHHHHHHHHHHHH----hCCcCeEEEeeCChhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999987 4999999999975567888888999999999999999999998773 8
Q ss_pred CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----------
Q 008588 349 PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------- 416 (560)
Q Consensus 349 ~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------- 416 (560)
|++||||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++++
T Consensus 217 ~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~~~~G~p~~~~~~~g 295 (446)
T cd07106 217 RVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIY-DEFCEALVALAKAAVVGDGLDPGTTLG 295 (446)
T ss_pred eeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccH-HHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 999999999999999999999999999999999887 999999999999999 6999999999887632
Q ss_pred -----------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHh
Q 008588 417 -----------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 462 (560)
Q Consensus 417 -----------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 462 (560)
++ +|+... .++| | | ++|.+++||+||||++|++|+|+||||+++|+
T Consensus 296 pli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~ 375 (446)
T cd07106 296 PVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARAND 375 (446)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhC
Confidence 11 233322 1333 6 2 35789999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 463 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 463 ~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
++|||++||||+|.++++++++++++|+|+||++....+.+||||.|+||+|. ++|++|+++||+.|+|+
T Consensus 376 ~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~t~~k~v~ 445 (446)
T cd07106 376 SEYGLGASVWSSDLERAEAVARRLEAGTVWINTHGALDPDAPFGGHKQSGIGV----EFGIEGLKEYTQTQVIN 445 (446)
T ss_pred CCCCceEEEECCCHHHHHHHHHhCCccEEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999988777788999999999863 56999999999999985
No 34
>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-76 Score=642.48 Aligned_cols=401 Identities=15% Similarity=0.169 Sum_probs=340.1
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.+.++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++.+|++++.
T Consensus 20 ~~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 93 (475)
T PRK13473 20 PVYNPATGEVLAEIAEAS------AAQVDAAVAAADAAFPEWSQTTPKERAEALLKLADAIEENADEFARLESLNCGKPL 93 (475)
T ss_pred eeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 345677899999988887 88999999999999999999999999999999999999999999998876654432
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
.++. ..|+..+++.++++++..+.. +...+.. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 94 ----~~a~-------~~ev~~~~~~~~~~a~~~~~~~g~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~i~ 160 (475)
T PRK13473 94 ----HLAL-------NDEIPAIVDVFRFFAGAARCLEGKAAGEY--LEGHTSMIRRDPVGVVASIAPWNYPLMMAAWKLA 160 (475)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCceeEEEEecceeEEEEccCChHHHHHHHHHH
Confidence 1111 125667777777766433211 2111110 1233457889999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
|||++||+||+|||+.||+++..+++++.+ +||+|++|+|++ +.+++..|..||+||+|+||||+++|+.|++++
T Consensus 161 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----alP~gv~~~v~g~~~~~~~~l~~~~~vd~V~fTGs~~~g~~i~~~a 236 (475)
T PRK13473 161 PALAAGNTVVLKPSEITPLTALKLAELAAD----ILPPGVLNVVTGRGATVGDALVGHPKVRMVSLTGSIATGKHVLSAA 236 (475)
T ss_pred HHHhcCCEEEEECCCCChHHHHHHHHHHHH----hCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 999999999999999999999999999987 399999999996 667888888899999999999999999999877
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||++|| |+|+++|+++++++++
T Consensus 237 a~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~G~p~~~ 315 (475)
T PRK13473 237 ADSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIY-DDLVAKLAAAVATLKVGDPDDE 315 (475)
T ss_pred hhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 6999999999887532
Q ss_pred -----------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 -----------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 -----------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ +||... .+ ++ | | +++.+++||+||||++|++|+|+|||
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~dea 395 (475)
T PRK13473 316 DTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVFGPVVSVTPFDDEDQA 395 (475)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCccCCeEEEeccCCHHHH
Confidence 12 233322 23 33 6 3 36889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
|+++|+++|||++||||+|.+++.++++++++|+|+||++....+.+||||.+.||+|. ++|.+|+++||+.|+++
T Consensus 396 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~t~~k~i~ 471 (475)
T PRK13473 396 VRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKQSGYGK----DMSLYGLEDYTVVRHVM 471 (475)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHHhceEEEE
Confidence 99999999999999999999999999999999999999977666678999999999863 56999999999999998
Q ss_pred EcC
Q 008588 537 RGN 539 (560)
Q Consensus 537 ~~~ 539 (560)
+.+
T Consensus 472 ~~~ 474 (475)
T PRK13473 472 VKH 474 (475)
T ss_pred Eec
Confidence 754
No 35
>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1. NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.
Probab=100.00 E-value=6e-76 Score=637.51 Aligned_cols=397 Identities=16% Similarity=0.170 Sum_probs=340.2
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ ++|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (457)
T cd07090 3 EPATGEVLATVHCAG------AEDVDLAVKSAKAAQKEWSATSGMERGRILRKAADLLRERNDEIARLETIDNGKPI--- 73 (457)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 467888899887777 89999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
.++ ..|+..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| ||. +.+++++|||
T Consensus 74 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~AL 141 (457)
T cd07090 74 -EEA--------RVDIDSSADCLEYYAGLAPTLSGEHVPL---PGGSFAYTRREPLGVCAGIGAWNYPIQIASWKSAPAL 141 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCeeecc---CCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHH
Confidence 122 23567777777777654332 2222211 1244567889999999999998 796 5689999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-- 347 (560)
++||+||+|||+.+|.|+..+.+++.+ + +|+|++|+|+++.++++.|..||+||+|+||||+++|++|++++.
T Consensus 142 aaGN~Vv~Kps~~~~~~~~~l~~~~~~----aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa~~ 217 (457)
T cd07090 142 ACGNAMVYKPSPFTPLTALLLAEILTE----AGLPDGVFNVVQGGGETGQLLCEHPDVAKVSFTGSVPTGKKVMSAAAKG 217 (457)
T ss_pred hcCCeeeecCCCcCcHHHHHHHHHHHH----cCCCcccEEEEeCChhhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999987 7 999999999965457788889999999999999999999998874
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---------
Q 008588 348 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 416 (560)
Q Consensus 348 -~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------- 416 (560)
||+++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|||||++|| |+|+++|++++++++.
T Consensus 218 ~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~ 296 (457)
T cd07090 218 IKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIK-DEFTERLVERTKKIRIGDPLDEDTQ 296 (457)
T ss_pred CCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999887531
Q ss_pred -------------------------eE-ecCccc-------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 -------------------------GL-FGGPRA-------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 -------------------------~~-~g~~~~-------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+||
T Consensus 297 ~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~de 376 (457)
T cd07090 297 MGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREEIFGPVMSILPFDTEEE 376 (457)
T ss_pred cccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhCCCCCCeEEEEEECCHHH
Confidence 12 233321 13 33 6 3 3588999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.|.||+|. ++|++|+++||+.|+|
T Consensus 377 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~f~~~k~~ 452 (457)
T cd07090 377 VIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYNISPVEVPFGGYKQSGFGR----ENGTAALEHYTQLKTV 452 (457)
T ss_pred HHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCCccCcCCc----cchHHHHHHHhCeEEE
Confidence 999999999999999999999999999999999999999876666678999999999763 5699999999999999
Q ss_pred EEcCc
Q 008588 536 LRGNG 540 (560)
Q Consensus 536 ~~~~~ 540 (560)
++.++
T Consensus 453 ~~~~~ 457 (457)
T cd07090 453 YVEMG 457 (457)
T ss_pred EEeCC
Confidence 87653
No 36
>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase. This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.
Probab=100.00 E-value=7.2e-76 Score=641.34 Aligned_cols=397 Identities=20% Similarity=0.209 Sum_probs=337.5
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 20 ~~nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 93 (488)
T TIGR02299 20 TLSPATNEVLGSVARGG------AADVDRAAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLR 93 (488)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH
Confidence 34667899999887777 889999999999999999999999999999999999999999999998877654321
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc--cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE--PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
++ ..|+...++.+++++...+ ..+...+. .....+.+|+|+|||++|+|| ||. +.+++++
T Consensus 94 ----~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 157 (488)
T TIGR02299 94 ----QT--------RQQVIRAAENFRFFADKCEEAMDGRTYPV----DTHLNYTVRVPVGPVGLITPWNAPFMLSTWKIA 157 (488)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHhHHHhcCCccccC----CCceEEEEEEecceEEEECCCccHHHHHHHHHH
Confidence 21 1355566666666654322 11222211 123457889999999999998 796 5679999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
|||++||+||+|||+.||+|+.++.+++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 158 ~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 233 (488)
T TIGR02299 158 PALAFGNTVVLKPAEWSPLTAARLAEIAKE----AGLPDGVFNLVHGFGEEAGKALVAHPDVKAVSFTGETATGSIIMRN 233 (488)
T ss_pred HHHHcCCEEEEECchhchHHHHHHHHHHHH----cCcChhheeEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999887 7 99999999996 66677788889999999999999999999988
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
++ +|++||||||||+||++|||+|.|++.+++|+|.|+| +|++++|||||+++| |+|+++|+++++++++
T Consensus 234 aa~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~l~~g~p~~ 312 (488)
T TIGR02299 234 GADTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIA-EDFVEKLVERVRAIRVGHPLD 312 (488)
T ss_pred HHhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHH-HHHHHHHHHHHhhCCcCCCCC
Confidence 63 8999999999999999999999999999999999887 999999999999999 6999999999887632
Q ss_pred -----------------------------eE-ecCccc---------cc-cc-c-C-----CCCCcccccccCceEEEEE
Q 008588 417 -----------------------------GL-FGGPRA---------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 417 -----------------------------~~-~g~~~~---------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~ 449 (560)
++ +|+... .+ ++ | | ++|.+++||+||||++|++
T Consensus 313 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~ 392 (488)
T TIGR02299 313 PETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIAQEEIFGPVLTVIP 392 (488)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCchhhCCCcCCeEEEEe
Confidence 12 243221 13 33 5 2 3588999999999999999
Q ss_pred eCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcc
Q 008588 450 VDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGL 529 (560)
Q Consensus 450 ~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~f 529 (560)
|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.+.||+|. ++|.+|+++|
T Consensus 393 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~ 468 (488)
T TIGR02299 393 FKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNVRHLPTPFGGVKASGIGR----EGGTYSFDFY 468 (488)
T ss_pred eCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHH
Confidence 999999999999999999999999999999999999999999999876656678999999999863 5699999999
Q ss_pred eEEEEEEEcC
Q 008588 530 LTTRWILRGN 539 (560)
Q Consensus 530 t~~K~v~~~~ 539 (560)
|+.|+|++++
T Consensus 469 ~~~k~i~~~~ 478 (488)
T TIGR02299 469 TETKNVALAL 478 (488)
T ss_pred hceEEEEEec
Confidence 9999998865
No 37
>PTZ00381 aldehyde dehydrogenase family protein; Provisional
Probab=100.00 E-value=4.8e-76 Score=639.63 Aligned_cols=387 Identities=18% Similarity=0.200 Sum_probs=329.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHH
Q 008588 134 KQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 213 (560)
Q Consensus 134 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~ 213 (560)
+.+|+++++++|++||+.|+.++.++|.++|++++++|++|.++|++++++|++++. .++...++..+.+++++++
T Consensus 5 ~~~~i~~av~~a~~a~~~~~~~~~~~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~----~ea~~~Ev~~~~~~i~~~~ 80 (493)
T PTZ00381 5 NPEIIPPIVKKLKESFLTGKTRPLEFRKQQLRNLLRMLEENKQEFSEAVHKDLGRHP----FETKMTEVLLTVAEIEHLL 80 (493)
T ss_pred CHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999999887653 2344445556677888888
Q ss_pred HHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHH
Q 008588 214 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 291 (560)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l 291 (560)
+.++.|++.... .. +... .....+++|+|+|||++|+|| ||. ++++++++||+|||+||+||||.||.|+.++
T Consensus 81 ~~~~~~~~~~~~-~~--~~~~--~~~~~~v~~~PlGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l 155 (493)
T PTZ00381 81 KHLDEYLKPEKV-DT--VGVF--GPGKSYIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLM 155 (493)
T ss_pred HHHHHHhCCccc-CC--cccc--CCCceEEEEecCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHH
Confidence 888887643211 10 1000 112457889999999999998 795 6789999999999999999999999999999
Q ss_pred HHHHHHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCH
Q 008588 292 HKVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANL 368 (560)
Q Consensus 292 ~~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADl 368 (560)
++++++ ++|+|++++|+|+.+.+..|..|+ +|+|+||||+++|+.|+++|. +|++||||||||+||++|||+
T Consensus 156 ~~ll~~----~lp~~~v~vv~g~~~~~~~l~~~~-~d~i~FTGS~~vG~~V~~~aa~~l~pv~lElGGk~p~iV~~dAdl 230 (493)
T PTZ00381 156 AKLLTK----YLDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAAAENLTPCTLELGGKSPVIVDKSCNL 230 (493)
T ss_pred HHHHHH----hCCcCEEEEecCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCcEEEEcCCCCceEEcCCCCH
Confidence 999986 499999999997555666566676 999999999999999998873 999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------------------------------e
Q 008588 369 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G 417 (560)
Q Consensus 369 d~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------~ 417 (560)
+.|++.+++|+|.|+| +|+|++|+|||++++ |+|+++|++.++++.. +
T Consensus 231 ~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~-d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~ 309 (493)
T PTZ00381 231 KVAARRIAWGKFLNAGQTCVAPDYVLVHRSIK-DKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGK 309 (493)
T ss_pred HHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHH-HHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCc
Confidence 9999999999999987 999999999999999 6999999998876510 1
Q ss_pred -EecCccc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcC
Q 008588 418 -LFGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 487 (560)
Q Consensus 418 -~~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~ 487 (560)
++||... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 310 ~~~gG~~~~~~~~i~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~ 389 (493)
T PTZ00381 310 VVYGGEVDIENKYVAPTIIVNPDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTS 389 (493)
T ss_pred EEECCCcCCCCCeEeeEEEecCCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCC
Confidence 1233221 12 33 5 2 368999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 488 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 488 ~G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
+|.|+||+.... .+.+||||.+.||+|. ++|.+|+++||+.|+|+++.
T Consensus 390 sG~v~IN~~~~~~~~~~~PFGG~g~SG~G~----~~G~~g~~~fs~~k~v~~~~ 439 (493)
T PTZ00381 390 SGAVVINDCVFHLLNPNLPFGGVGNSGMGA----YHGKYGFDTFSHPKPVLNKS 439 (493)
T ss_pred cceEEECCccccccCCCCCCCCcCcccccc----cchHHHHHhccceeEEEEcc
Confidence 999999987532 4678999999999873 67999999999999998874
No 38
>PLN02467 betaine aldehyde dehydrogenase
Probab=100.00 E-value=4.9e-76 Score=642.05 Aligned_cols=400 Identities=18% Similarity=0.171 Sum_probs=338.1
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHH-----HHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-----RRLQALQSQDRRKILLDVADALEANESLIKVENEADVA 187 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~-----~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~ 187 (560)
.++.+|+.++++...+ .+|+++|+++|++|| +.|+++|..+|.++|++++++|++|.++|++++++|++
T Consensus 28 ~~P~t~~~i~~~~~~~------~~dv~~av~~A~~a~~~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~G 101 (503)
T PLN02467 28 VNPATEETIGDIPAAT------AEDVDAAVEAARKAFKRNKGKDWARTTGAVRAKYLRAIAAKITERKSELAKLETLDCG 101 (503)
T ss_pred ECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHhhhcccchhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcC
Confidence 4567889999888777 899999999999999 89999999999999999999999999999998877765
Q ss_pred HHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccc-cccccCCCeeEEEeecceEEEEEEcCC-Chh-hHH
Q 008588 188 AAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALV 263 (560)
Q Consensus 188 ~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~ 263 (560)
++.. ++ ..|+...++.+++++...+ ..+... +......+...+++|+|+|||++|+|| ||. +.+
T Consensus 102 k~~~----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 169 (503)
T PLN02467 102 KPLD----EA--------AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEPLGVVGLITPWNYPLLMAT 169 (503)
T ss_pred CCHH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEecCceEEEECCCChHHHHHH
Confidence 4421 22 1356666666666664332 112211 000001133467889999999999998 796 568
Q ss_pred HHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHH
Q 008588 264 QIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQ 341 (560)
Q Consensus 264 ~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~ 341 (560)
++++|||++||+||+|||+.||+|+..+++++++ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.
T Consensus 170 ~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~e----ag~P~gvv~~v~g~~~~~~~~L~~~~~v~~v~fTGs~~~g~~ 245 (503)
T PLN02467 170 WKVAPALAAGCTAVLKPSELASVTCLELADICRE----VGLPPGVLNVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRK 245 (503)
T ss_pred HHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHH----cCcCcCeEEEEeCCchhHHHHHhcCCCCCEEEEECCHHHHHH
Confidence 9999999999999999999999999999999987 6 99999999996 6667888889999999999999999999
Q ss_pred HHHhcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-
Q 008588 342 IKESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV- 416 (560)
Q Consensus 342 i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~- 416 (560)
|++.+. ||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 246 v~~~aa~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g 324 (503)
T PLN02467 246 IMTAAAQMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIA-SEFLEKLVKWAKNIKIS 324 (503)
T ss_pred HHHHHhccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCC
Confidence 998773 8999999999999999999999999999999999987 999999999999999 6999999999887521
Q ss_pred ---------------------------------eE-ecCccc----cccc--c-C-----CCCCcccccccCceEEEEEe
Q 008588 417 ---------------------------------GL-FGGPRA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIV 450 (560)
Q Consensus 417 ---------------------------------~~-~g~~~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~ 450 (560)
++ .||.+. .++| | | ++|++++||+||||++|++|
T Consensus 325 ~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~ 404 (503)
T PLN02467 325 DPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTF 404 (503)
T ss_pred CCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHhhCCCCCceEEEEee
Confidence 12 233321 2333 5 2 35889999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcce
Q 008588 451 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLL 530 (560)
Q Consensus 451 ~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft 530 (560)
+|+||||+++|+++|||+++|||+|.++++++++++++|+|+||+.+......||||.+.||+|. ++|++|+++||
T Consensus 405 ~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~ft 480 (503)
T PLN02467 405 STEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQPCFCQAPWGGIKRSGFGR----ELGEWGLENYL 480 (503)
T ss_pred CCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCcCCC----cchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999876555678999999998863 56999999999
Q ss_pred EEEEEEEcC
Q 008588 531 TTRWILRGN 539 (560)
Q Consensus 531 ~~K~v~~~~ 539 (560)
+.|++++..
T Consensus 481 ~~k~i~~~~ 489 (503)
T PLN02467 481 SVKQVTKYI 489 (503)
T ss_pred CeEEEEEec
Confidence 999998854
No 39
>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like. NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.
Probab=100.00 E-value=9.4e-76 Score=636.80 Aligned_cols=397 Identities=19% Similarity=0.217 Sum_probs=335.6
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ ++|+++++++|++||+.|+++|..+|.++|++++++|++|.++|++++++|++++..
T Consensus 15 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 87 (465)
T cd07151 15 LNPYTGETLAEIPAAS------KEDVDEAYRAAAAAQKEWAATLPQERAEILEKAAQILEERRDEIVEWLIRESGSTRI- 87 (465)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567888899887777 899999999999999999999999999999999999999999999998776654421
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
++ ..|+..+++.+++++...+. .+...+.. ..+...+++|+|+|||++|+|| ||+ +.+++++||
T Consensus 88 ---~a--------~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~A 154 (465)
T cd07151 88 ---KA--------NIEWGAAMAITREAATFPLRMEGRILPSD--VPGKENRVYREPLGVVGVISPWNFPLHLSMRSVAPA 154 (465)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHhHHHhcCccccCC--CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 21 13566777777777654322 22222211 1233467889999999999997 795 568999999
Q ss_pred HHhCCeEEeeCCcchHHHH-HHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 270 IRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~-~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
|++||+||+|||+.||+++ .++.+++.+ + +|+|+||+|++ +.++++.|..||.+|+|+||||+++|+.|++++
T Consensus 155 LaaGN~Vi~Kps~~~p~~~~~~l~~~l~~----aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 230 (465)
T cd07151 155 LALGNAVVLKPASDTPITGGLLLAKIFEE----AGLPKGVLNVVVGAGSEIGDAFVEHPVPRLISFTGSTPVGRHIGELA 230 (465)
T ss_pred HHcCCEEEEECCCCCcHhHHHHHHHHHHH----cCcCccceEEEecCchhhHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 9999999999999999996 688888886 7 99999999995 566788888899999999999999999998877
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. ||++||||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 231 a~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 309 (465)
T cd07151 231 GRHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVY-DEFVEKFVERVKALPYGDPSDP 309 (465)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 3 8999999999999999999999999999999999887 999999999999999 6999999999887632
Q ss_pred ----------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 008588 417 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 460 (560)
Q Consensus 417 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 460 (560)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++
T Consensus 310 ~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~ 389 (465)
T cd07151 310 DTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEPTVLSDVTNDMEIAREEIFGPVAPIIKADDEEEALELA 389 (465)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEccEEEeCCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHH
Confidence 11 1222211133 5 2 358899999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEEEc
Q 008588 461 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 461 N~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~ 538 (560)
|+++|||++||||+|.++++++++++++|+|+||+.+.. .+.+||||.+.||+|+ ++|++|+++||+.|++++.
T Consensus 390 n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~~~~~ 464 (465)
T cd07151 390 NDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPVNDEPHVPFGGEKNSGLGR----FNGEWALEEFTTDKWISVQ 464 (465)
T ss_pred hCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCc----CChHHHHHHhhceEEEEec
Confidence 999999999999999999999999999999999987644 3568999999998863 5699999999999999763
No 40
>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like. Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.
Probab=100.00 E-value=1.4e-75 Score=636.66 Aligned_cols=399 Identities=20% Similarity=0.193 Sum_probs=337.9
Q ss_pred hhhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 111 ~i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.+.++.+ |+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.+++
T Consensus 17 ~v~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 90 (473)
T cd07097 17 ENRNPSDTSDVVGKYARAS------AEDADAAIAAAAAAFPAWRRTSPEARADILDKAGDELEARKEELARLLTREEGKT 90 (473)
T ss_pred eeECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 3456774 88889887777 8999999999999999999999999999999999999999999999987776544
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.. ++ ..|+..+++.+++++...+ ..|...+. ...+...+++++|+|||++|+|| ||+ ++++++
T Consensus 91 ~~----~a--------~~ev~~~~~~l~~~a~~~~~~~g~~~~~--~~~~~~~~~~~~P~GVv~~I~P~N~Pl~~~~~~i 156 (473)
T cd07097 91 LP----EA--------RGEVTRAGQIFRYYAGEALRLSGETLPS--TRPGVEVETTREPLGVVGLITPWNFPIAIPAWKI 156 (473)
T ss_pred HH----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEEeeeeEEEEcccChHHHHHHHHH
Confidence 21 22 2366677777777664332 22222211 11234567889999999999998 796 567999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++
T Consensus 157 ~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 232 (473)
T cd07097 157 APALAYGNTVVFKPAELTPASAWALVEILEE----AGLPAGVFNLVMGSGSEVGQALVEHPDVDAVSFTGSTAVGRRIAA 232 (473)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCCCCcceEEeccCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 6 99999999996 5667888888999999999999999999998
Q ss_pred hcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC----
Q 008588 345 STK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 416 (560)
Q Consensus 345 ~a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 416 (560)
+++ ||++||||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 233 ~aa~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~ 311 (473)
T cd07097 233 AAAARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIH-DRFVEALVERTKALKVGDAL 311 (473)
T ss_pred HHhccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHH-HHHHHHHHHHHHhCCCCCCC
Confidence 773 8999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ------------------------------eE-ecCccc----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 417 ------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 417 ------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
++ +|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (473)
T cd07097 312 DEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGPVAAVIRVRDY 391 (473)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCCCcCceEEEeccCCH
Confidence 12 243321 233 3 5 2 35889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
||||+++|+++|||+++|||+|.++++++++++++|+|+||+++.. ....||||.+.||+|. +++|.+|+++||+.
T Consensus 392 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~PfGG~~~SG~G~---~~~g~~~l~~f~~~ 468 (473)
T cd07097 392 DEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTAGVDYHVPFGGRKGSSYGP---REQGEAALEFYTTI 468 (473)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCcc---cCCcHHHHHHhhce
Confidence 9999999999999999999999999999999999999999987654 3568999999998861 25699999999999
Q ss_pred EEEEE
Q 008588 533 RWILR 537 (560)
Q Consensus 533 K~v~~ 537 (560)
|+|++
T Consensus 469 k~v~~ 473 (473)
T cd07097 469 KTVYV 473 (473)
T ss_pred eEEeC
Confidence 99863
No 41
>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like. NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.
Probab=100.00 E-value=2e-75 Score=630.97 Aligned_cols=391 Identities=19% Similarity=0.223 Sum_probs=330.8
Q ss_pred CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHH
Q 008588 118 GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKS 197 (560)
Q Consensus 118 G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~ 197 (560)
|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|+++... ++
T Consensus 1 ~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~a 70 (443)
T cd07152 1 GAVLGEVGVAD------AADVDRAAARAAAAQRAWAATPPRERAAVLRRAADLLEEHADEIADWIVRESGSIRP----KA 70 (443)
T ss_pred CCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH----HH
Confidence 35677777777 899999999999999999999999999999999999999999999998877654321 11
Q ss_pred HHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCC
Q 008588 198 LVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGN 274 (560)
Q Consensus 198 ~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGN 274 (560)
..|+..+++.+++++...+ ..+...+. ..+...+.+|+|+|||++|+|| ||. +.+++++|||++||
T Consensus 71 --------~~ev~~~i~~l~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN 139 (443)
T cd07152 71 --------GFEVGAAIGELHEAAGLPTQPQGEILPS---APGRLSLARRVPLGVVGVISPFNFPLILAMRSVAPALALGN 139 (443)
T ss_pred --------HHHHHHHHHHHHHHHHhHHHhCCccccc---cCCceeEEEEecceEEEEECCCCcHHHHHHHHHHHHHHcCC
Confidence 2467777888887765432 33332221 1244567889999999999998 796 56899999999999
Q ss_pred eEEeeCCcchHHHH-HHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CC
Q 008588 275 GLLLKGGKEAMRSN-AILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IP 349 (560)
Q Consensus 275 tvVlKPse~tp~t~-~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~ 349 (560)
+||+|||+++|.++ ..+++++.+ + +|+|++|+|+++.++++.|..||++|+|+||||+.+|+.|+++++ ||
T Consensus 140 ~VvlKps~~~p~~~~~~l~~~~~~----ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~ 215 (443)
T cd07152 140 AVVLKPDPRTPVSGGVVIARLFEE----AGLPAGVLHVLPGGADAGEALVEDPNVAMISFTGSTAVGRKVGEAAGRHLKK 215 (443)
T ss_pred EEEEECCcccchhHHHHHHHHHHH----hCcCcCcEEEecCChHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCc
Confidence 99999999999996 788888886 6 999999999975567888888999999999999999999988773 89
Q ss_pred EEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------------
Q 008588 350 VLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------ 416 (560)
Q Consensus 350 ~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------ 416 (560)
+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 216 ~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gp 294 (443)
T cd07152 216 VSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVA-DAYTAKLAAKAKHLPVGDPATGQVALGP 294 (443)
T ss_pred EEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCCcCC
Confidence 99999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred ----------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCC
Q 008588 417 ----------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSA 466 (560)
Q Consensus 417 ----------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~G 466 (560)
++ +|+.....++ | | ++|++++||+||||++|++|+|+||||+++|+++||
T Consensus 295 li~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~g 374 (443)
T cd07152 295 LINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYG 374 (443)
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEecCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCcc
Confidence 11 1222111133 5 2 358999999999999999999999999999999999
Q ss_pred ceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 467 HTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 467 L~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
|++||||+|.++++++++++++|.|+||+++... +..||||.+.||+|. +.+|++|+++||+.|++++
T Consensus 375 L~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~~~SG~G~---~~~g~~~l~~~~~~k~~~~ 443 (443)
T cd07152 375 LSAGIISRDVGRAMALADRLRTGMLHINDQTVNDEPHNPFGGMGASGNGS---RFGGPANWEEFTQWQWVTV 443 (443)
T ss_pred ceEEEECCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCcccccCCC---ccCcHHHHHHhhceeEEeC
Confidence 9999999999999999999999999999876554 468999999998762 2458999999999999863
No 42
>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like. Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.
Probab=100.00 E-value=2.4e-75 Score=632.65 Aligned_cols=394 Identities=18% Similarity=0.216 Sum_probs=333.5
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||++|+++|.++|.++|++++++|++|.++|++++.+|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~--- 73 (456)
T cd07110 3 NPATEATIGEIPAAT------AEDVDAAVRAARRAFPRWKKTTGAERAKYLRAIAEGVRERREELAELEARDNGKPL--- 73 (456)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH---
Confidence 467899999987777 89999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccccc----cccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI----GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
.++. .|+...++.++++++..+.. +...+. ...+...+++|+|+|||++|+|| ||. +..++++
T Consensus 74 -~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~ 142 (456)
T cd07110 74 -DEAA--------WDVDDVAGCFEYYADLAEQLDAKAERAVPL--PSEDFKARVRREPVGVVGLITPWNFPLLMAAWKVA 142 (456)
T ss_pred -HHHH--------HHHHHHHHHHHHHHHHHHHhhccCCccccC--CCCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 1221 24555555555554322111 111111 01244567889999999999998 796 5678999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||+.||+++..+++++++ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|+++
T Consensus 143 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~ 218 (456)
T cd07110 143 PALAAGCTVVLKPSELTSLTELELAEIAAE----AGLPPGVLNVVTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQA 218 (456)
T ss_pred HHHHcCCEEEEECcccchHHHHHHHHHHHH----cCCCCCcEEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 56678888899999999999999999999988
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 aa~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 297 (456)
T cd07110 219 AAQDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIA-DAFLERLATAAEAIRVGDPLE 297 (456)
T ss_pred HhhcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 74 8999999999999999999999999999999999887 999999999999999 6999999999876521
Q ss_pred -----------------------------eE-ecCccc----cccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -----------------------------GL-FGGPRA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -----------------------------~~-~g~~~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .++| | | ++|.+++||+||||++|++|+|+|
T Consensus 298 ~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i~~~E~fgPvl~v~~~~~~~ 377 (456)
T cd07110 298 EGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWREEIFGPVLCVRSFATED 377 (456)
T ss_pred CCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChHhhCCCcCCeEEEEecCCHH
Confidence 22 244321 2333 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+++...+..||||.+.||+|. ++|++|+++||+.|+
T Consensus 378 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~ 453 (456)
T cd07110 378 EAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQPCFPQAPWGGYKRSGIGR----ELGEWGLDNYLEVKQ 453 (456)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccCCc----cchHHHHHHhcceeE
Confidence 9999999999999999999999999999999999999999876556678999999998763 569999999999999
Q ss_pred EE
Q 008588 535 IL 536 (560)
Q Consensus 535 v~ 536 (560)
|+
T Consensus 454 i~ 455 (456)
T cd07110 454 IT 455 (456)
T ss_pred Ee
Confidence 85
No 43
>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like. NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.7e-75 Score=636.19 Aligned_cols=397 Identities=16% Similarity=0.219 Sum_probs=338.0
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR-LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~-w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|+++...
T Consensus 28 ~~P~tg~~i~~~~~~~------~~~v~~ai~~A~~A~~~~w~~~~~~~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 101 (484)
T cd07144 28 VNPSTGEVIASVYAAG------EEDVDKAVKAARKAFESWWSKVTGEERGELLDKLADLVEKNRDLLAAIEALDSGKPYH 101 (484)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH
Confidence 4567888899888777 88999999999999996 8899999999999999999999999999988777544321
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
++. ..|+..+++.+++++++.+. .+...+. ..+...+..|+|+|||++|+|| ||. +++++++|
T Consensus 102 ----~~~-------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~ 167 (484)
T cd07144 102 ----SNA-------LGDLDEIIAVIRYYAGWADKIQGKTIPT---SPNKLAYTLHEPYGVCGQIIPWNYPLAMAAWKLAP 167 (484)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEecceEEEEECcCCCHHHHHHHHHHH
Confidence 111 23566777777777654322 2322221 1233457889999999999997 796 46899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.+|+++..+.+++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|++|++.+
T Consensus 168 ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~fTGS~~~g~~i~~~a 243 (484)
T cd07144 168 ALAAGNTVVIKPAENTPLSLLYFANLVKE----AGFPPGVVNIIPGYGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA 243 (484)
T ss_pred HHHcCCEEEEECCccchHHHHHHHHHHHH----hCcCCCcEEEEecCCchHHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999996 667888888999999999999999999999876
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh-cC------
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-EG------ 415 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~-~~------ 415 (560)
.||+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|++++++ ++
T Consensus 244 ~~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~~G~p~~ 322 (484)
T cd07144 244 AQNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIY-DKFVEKFVEHVKQNYKVGSPFD 322 (484)
T ss_pred HhcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhhCCcCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999874 32
Q ss_pred ----------------------------CeE-ecCccc-----cccc--c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 416 ----------------------------VGL-FGGPRA-----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 416 ----------------------------~~~-~g~~~~-----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
.++ +|+... .++| | | ++|.+++||+||||++|++|+|+
T Consensus 323 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~ 402 (484)
T cd07144 323 DDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEEIFGPVVVISKFKTY 402 (484)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhCCCCCceEEEeccCCH
Confidence 122 244321 2333 5 2 36899999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
||||+++|+++|||++||||+|.+++.+|++++++|+|+||+++...+..||||.|+||+|. ++|++|+++||+.|
T Consensus 403 ~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k 478 (484)
T cd07144 403 EEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSNDSDVGVPFGGFKMSGIGR----ELGEYGLETYTQTK 478 (484)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccCcCCC----CchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999887666678999999999863 56999999999999
Q ss_pred EEEEc
Q 008588 534 WILRG 538 (560)
Q Consensus 534 ~v~~~ 538 (560)
+|+++
T Consensus 479 ~v~~~ 483 (484)
T cd07144 479 AVHIN 483 (484)
T ss_pred EEEEe
Confidence 99764
No 44
>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like. NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.
Probab=100.00 E-value=2.5e-75 Score=634.65 Aligned_cols=397 Identities=16% Similarity=0.148 Sum_probs=339.0
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH-HHh-hCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR-RLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~-~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.++.+|+.++++...+ .+|+++++++|++||+ .|+ ++|.++|.++|+++++.|++|.++|++++++|++++.
T Consensus 27 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~~W~~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 100 (481)
T cd07143 27 YNPSTGKLITKIAEAT------EADVDIAVEVAHAAFETDWGLKVSGSKRGRCLSKLADLMERNLDYLASIEALDNGKTF 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhhhhhhcccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCh
Confidence 4567888999988777 8999999999999998 599 9999999999999999999999999999887765442
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
. +.. ..|+..+++.+++++.+.+. .|...+. ..+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 101 ~----~~~-------~~ev~~~~~~~~~~a~~a~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~ 166 (481)
T cd07143 101 G----TAK-------RVDVQASADTFRYYGGWADKIHGQVIET---DIKKLTYTRHEPIGVCGQIIPWNFPLLMCAWKIA 166 (481)
T ss_pred H----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEecceeEEEECCCcChHHHHHHHHH
Confidence 1 110 13567777778877765432 2332221 1233467889999999999998 796 4589999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
|||++||+||+|||+.||+++..+++++.+ + ||+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++.
T Consensus 167 ~ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~G~~i~~~ 242 (481)
T cd07143 167 PALAAGNTIVLKPSELTPLSALYMTKLIPE----AGFPPGVINVVSGYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEA 242 (481)
T ss_pred HHHHcCCEEEEeCCCCCcHHHHHHHHHHHh----cCcCcccEEEEeCCchhHHHHHhcCCCCCEEEEECchHHHHHHHHH
Confidence 999999999999999999999999999886 7 99999999996 56778888899999999999999999999887
Q ss_pred cC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC----
Q 008588 346 TK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---- 416 (560)
Q Consensus 346 a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~---- 416 (560)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++++
T Consensus 243 aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~ 321 (481)
T cd07143 243 AAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIY-DKFVKRFKEKAKKLKVGDPF 321 (481)
T ss_pred HHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCC
Confidence 63 6999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ------------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 ------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 ------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +|+.+. .+ ++ | | +++.+++||+||||++|++|+|+||
T Consensus 322 ~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~e 401 (481)
T cd07143 322 AEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFGPVVAVIKFKTEEE 401 (481)
T ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcCCeEEEEeeCCHHH
Confidence 11 233321 23 33 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.+.||+|. ++|.+|+++||+.|+|
T Consensus 402 ai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~~t~~k~i 477 (481)
T cd07143 402 AIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYNLLHHQVPFGGYKQSGIGR----ELGEYALENYTQIKAV 477 (481)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCccccccCc----ccHHHHHHHHhCeEEE
Confidence 999999999999999999999999999999999999999987666778999999998863 5799999999999999
Q ss_pred EEc
Q 008588 536 LRG 538 (560)
Q Consensus 536 ~~~ 538 (560)
+++
T Consensus 478 ~~~ 480 (481)
T cd07143 478 HIN 480 (481)
T ss_pred EEe
Confidence 764
No 45
>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like. NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.
Probab=100.00 E-value=3.5e-75 Score=631.31 Aligned_cols=398 Identities=19% Similarity=0.249 Sum_probs=335.2
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++..
T Consensus 4 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 76 (456)
T cd07145 4 RNPANGEVIDTVPSLS------REEVREAIEVAEKAKDVMSNLPAYKRYKILMKVAELIERRKEELAKLLTIEVGKPIK- 76 (456)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH-
Confidence 3567888889887777 899999999999999999999999999999999999999999999988776554321
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
++ ..|+..+++.++++++..+ ..+...+... ...+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~ 145 (456)
T cd07145 77 ---QS--------RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGVVGAITPFNFPANLFAHKIA 145 (456)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEecceeEEEECCCChHHHHHHHHHH
Confidence 22 2356666777776654321 1222211100 01133467889999999999998 796 5679999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||+.+|+|+.++++++++ + +|+|++|+|++ +.++++.|..||++|+|+||||+++|+.|+++
T Consensus 146 ~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~----ag~p~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 221 (456)
T cd07145 146 PAIAVGNSVVVKPSSNTPLTAIELAKILEE----AGLPPGVINVVTGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASK 221 (456)
T ss_pred HHHHcCCEEEEECCccchHHHHHHHHHHHH----cCCCcccEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 66788888899999999999999999999988
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 222 aa~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 300 (456)
T cd07145 222 AGGTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVY-DKFLKLLVEKVKKLKVGDPLD 300 (456)
T ss_pred HhhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCCCC
Confidence 74 9999999999999999999999999999999999987 999999999999999 6999999999887532
Q ss_pred -----------------------------eE-ecCccccc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 008588 417 -----------------------------GL-FGGPRASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 458 (560)
Q Consensus 417 -----------------------------~~-~g~~~~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 458 (560)
++ +|+....+ ++ | | ++|.+++||+||||++|++|+|+||||+
T Consensus 301 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~ 380 (456)
T cd07145 301 ESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPPTVLENDTPDMIVMKEEVFGPVLPIAKVKDDEEAVE 380 (456)
T ss_pred CCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECCEeecCCCCCChHhhCCCCCceEEEEEECCHHHHHH
Confidence 11 23322213 33 5 3 3688999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 459 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 459 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
++|+++|||++||||+|.++++++++++++|.|+||+.+... +.+||||.+.||+|. ++|++|+++|++.|+|++
T Consensus 381 ~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~l~~f~~~k~v~~ 456 (456)
T cd07145 381 IANSTEYGLQASVFTNDINRALKVARELEAGGVVINDSTRFRWDNLPFGGFKKSGIGR----EGVRYTMLEMTEEKTIVI 456 (456)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccccCCc----CchHHHHHHhhceeEEeC
Confidence 999999999999999999999999999999999999876433 568999999999863 569999999999999863
No 46
>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like. Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.
Probab=100.00 E-value=4.2e-75 Score=630.24 Aligned_cols=398 Identities=22% Similarity=0.248 Sum_probs=332.4
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ ++|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 75 (452)
T cd07147 4 TNPYTGEVVARVALAG------PDDIEEAIAAAVKAFRPMRALPAHRRAAILLHCVARLEERFEELAETIVLEAGKPI-- 75 (452)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH--
Confidence 4567889899987777 89999999999999999999999999999999999999999999998876654432
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
.++. .|+...+..++++++... ..++..+... ...+...+++|+|+|||++|+|| ||. +.+++++
T Consensus 76 --~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (452)
T cd07147 76 --KDAR--------GEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGPVSAITPFNFPLNLVAHKVA 145 (452)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEeceeEEEEEcCCCcHHHHHHHHHH
Confidence 1221 245555555555543221 1122111000 01233456789999999999998 685 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
+||++||+||+|||+.+|.++.++++++++ + +|+|+||+|+++.+.+..|..||++|+|+||||+++|+.|++.+
T Consensus 146 ~ALaaGN~VIlKps~~~p~~~~~l~~~l~~----ag~P~g~v~~v~g~~~~~~~l~~~~~v~~v~fTGs~~~g~~v~~~a 221 (452)
T cd07147 146 PAIAAGCPFVLKPASRTPLSALILGEVLAE----TGLPKGAFSVLPCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARA 221 (452)
T ss_pred HHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCcCcEEEEeCCccchhHHhcCCCCCEEEEECCHHHHHHHHHHh
Confidence 999999999999999999999999999987 6 99999999996455677788899999999999999999999886
Q ss_pred C-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 347 K-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 347 ~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
+ +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|++++++++.
T Consensus 222 ~~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~ 300 (452)
T cd07147 222 GKKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVY-DEFKSRLVARVKALKTGDPKDDAT 300 (452)
T ss_pred CcCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 4 8999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred --------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHh
Q 008588 417 --------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ 462 (560)
Q Consensus 417 --------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~ 462 (560)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|+
T Consensus 301 ~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~ 380 (452)
T cd07147 301 DVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTILEDVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVND 380 (452)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEEeCCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhC
Confidence 11 1222211233 5 2 35889999999999999999999999999999
Q ss_pred cCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 463 HGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 463 ~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
++|||++||||+|.++++++++++++|+|+||+++.. .+..||||.|+||+|. ++|++|+++||+.|+|++
T Consensus 381 ~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~~~~k~i~~ 452 (452)
T cd07147 381 SKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVPTFRVDHMPYGGVKDSGIGR----EGVRYAIEEMTEPRLLVI 452 (452)
T ss_pred CCCCceEEEECCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCcCCccccccCC----CChHHHHHHhcceeEEeC
Confidence 9999999999999999999999999999999987654 4668999999999873 579999999999999864
No 47
>PLN02203 aldehyde dehydrogenase
Probab=100.00 E-value=4.1e-75 Score=629.79 Aligned_cols=386 Identities=20% Similarity=0.219 Sum_probs=322.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 214 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~ 214 (560)
.+||++++++|++||+.|+.++..+|.++|++++++|++|+++|++++++|++++. .++...++..+...++++++
T Consensus 5 ~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~~~Ev~~~~~~~~~~~~ 80 (484)
T PLN02203 5 GETLEGSVAELRETYESGRTRSLEWRKSQLKGLLRLLKDNEEAIFKALHQDLGKHR----VEAYRDEVGVLTKSANLALS 80 (484)
T ss_pred HHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999988876543 23322233333445555555
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHH
Q 008588 215 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 292 (560)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~ 292 (560)
.++.+.+... + ..+.. ..+...++.|+|+|||++|+|| ||+ +.++++++||++||+||+|||+.||+|+.+++
T Consensus 81 ~~~~~~~~~~--~-~~~~~--~~~~~~~~~reP~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~ 155 (484)
T PLN02203 81 NLKKWMAPKK--A-KLPLV--AFPATAEVVPEPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLA 155 (484)
T ss_pred HHHHHhcccc--c-cCCcc--cCCceeEEEEecccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHH
Confidence 5554432110 0 11100 1123567889999999999998 696 56899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcC---CC
Q 008588 293 KVITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDK---SA 366 (560)
Q Consensus 293 ~l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a---~~~~~lElGGk~p~iV~~---dA 366 (560)
+++.+ ++|+|+||+|+|+.++++.|..|+ +|+|+||||+++|+.|+++| .+|++||||||||+||++ ||
T Consensus 156 ~~~~~----~lP~gvv~vv~g~~~~~~~l~~~~-vd~v~fTGS~~~G~~v~~~aa~~l~~v~lElGGknp~iV~~d~~da 230 (484)
T PLN02203 156 ANIPK----YLDSKAVKVIEGGPAVGEQLLQHK-WDKIFFTGSPRVGRIIMTAAAKHLTPVALELGGKCPCIVDSLSSSR 230 (484)
T ss_pred HHHHH----hCCcCEEEEEeCCHHHHHHHHhCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEEccCCCCC
Confidence 99986 499999999998767888888885 99999999999999999887 399999999999999997 69
Q ss_pred CHHHHHHHHHhhcCC-CCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC----------------------------
Q 008588 367 NLDVAKNIVIDAKID-YPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------- 416 (560)
Q Consensus 367 Dld~Aa~~iv~~~f~-n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~---------------------------- 416 (560)
|+|.|++.+++|+|. |+| +|+|++|+|||+++| |+|+++|+++++++..
T Consensus 231 Dl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a 309 (484)
T PLN02203 231 DTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA-PILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDP 309 (484)
T ss_pred CHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHH
Confidence 999999999999995 666 999999999999999 6999999998876521
Q ss_pred ----e-EecCccc-cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 008588 417 ----G-LFGGPRA-SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 482 (560)
Q Consensus 417 ----~-~~g~~~~-~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~ 482 (560)
. +.|+... .++| | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++
T Consensus 310 ~~~~~~~~gg~~~~~g~~i~PTvl~~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~ 389 (484)
T PLN02203 310 RVAASIVHGGSIDEKKLFIEPTILLNPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRI 389 (484)
T ss_pred HhCCeEEeCCCcCCCCCEEeeEEEecCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHH
Confidence 1 1233221 2333 5 3 3689999999999999999999999999999999999999999999999999
Q ss_pred HhhcCeeeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 483 LCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 483 ~~~l~~G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
++++++|.|+||++... .+.+||||.+.||+|. ++|++|+++||+.|+|+++.
T Consensus 390 ~~~l~~G~V~IN~~~~~~~~~~~PfGG~k~SG~Gr----~~g~~~l~~ft~~k~v~~~~ 444 (484)
T PLN02203 390 LSETSSGSVTFNDAIIQYACDSLPFGGVGESGFGR----YHGKYSFDTFSHEKAVLRRS 444 (484)
T ss_pred HHhCCcceEEECCcccccCCCCCCCCCcCcccCCc----cccHHHHHHhcceeEEEEcC
Confidence 99999999999987542 3568999999999873 56999999999999998874
No 48
>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=5.4e-75 Score=633.82 Aligned_cols=401 Identities=18% Similarity=0.204 Sum_probs=333.6
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.+.++.+|+.++++...+ .+|+++++++|++||+.|++++..+|.++|+++++.|++|+++|++++++|++++.
T Consensus 34 ~~~~P~t~~~i~~~~~a~------~~dv~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~ 107 (496)
T PLN00412 34 AITNPSTRKTQYKVQACT------QEEVNKAMESAKAAQKAWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPA 107 (496)
T ss_pred EeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 456778888888887777 89999999999999999999999999999999999999999999999988876653
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhccc-ccc--ccccccccc---CCCeeEEEeecceEEEEEEcCC-Chh-hH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADME-EPI--GQILKRTEL---ADGLILEKTSCPLGVLLIVFES-RPD-AL 262 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~--~~~~~~~~~---~~~~~~~~~~~PlGVV~~I~p~-~P~-~~ 262 (560)
. ++. .|+...++.++++++.. +.. +...+.... ..+...+++|+|+|||++|+|| ||. ++
T Consensus 108 ~----~a~--------~Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~ 175 (496)
T PLN00412 108 K----DAV--------TEVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLTSKIPLGVVLAIPPFNYPVNLA 175 (496)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEEEEecceEEEEECCCCchHHHH
Confidence 2 221 23333444444433211 000 111110000 0122356789999999999998 785 67
Q ss_pred HHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHH
Q 008588 263 VQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVS 340 (560)
Q Consensus 263 ~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~ 340 (560)
+++++|||++||+||+|||+.||.++..+++++.+ + +|+|++|+|++ +.+++++|..||+||+|+|||| .+|+
T Consensus 176 ~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~V~ftGs-~~g~ 250 (496)
T PLN00412 176 VSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHL----AGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGI 250 (496)
T ss_pred HHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHH----hCCCcccEEEEecCchHHHHHHhcCCCcCEEEEeCh-HHHH
Confidence 89999999999999999999999999999999986 6 99999999996 5678888999999999999999 9999
Q ss_pred HHHHhcC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCe-
Q 008588 341 QIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG- 417 (560)
Q Consensus 341 ~i~~~a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~- 417 (560)
.|++++. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||++|| |+|+++|+++++++++.
T Consensus 251 ~v~~~a~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~ 329 (496)
T PLN00412 251 AISKKAGMVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVA-DALVEKVNAKVAKLTVGP 329 (496)
T ss_pred HHHHHhCCCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHHH-HHHHHHHHHHHHhCccCC
Confidence 9998875 9999999999999999999999999999999999987 999999999999999 69999999998876421
Q ss_pred --------------------------------Ee-cCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 418 --------------------------------LF-GGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 418 --------------------------------~~-g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
+. ++.....++ | | +++++++||+||||++|++|+|+||||
T Consensus 330 p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~deai 409 (496)
T PLN00412 330 PEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGI 409 (496)
T ss_pred CcccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEeCCCCCCHHHhCcCCCCeEEEEEeCCHHHHH
Confidence 11 111111122 5 2 368999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcC-cCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR-FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~-~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++|+++|||++||||+|.++++++++++++|+|+||++.. ..+.+||||.|.||+|+ ++|.+|+++||+.|+++
T Consensus 410 ~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~i~ 485 (496)
T PLN00412 410 HHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGS----QGITNSINMMTKVKSTV 485 (496)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCCCccccccCC----CChHHHHHHhcceEEEE
Confidence 99999999999999999999999999999999999998753 34568999999999873 56999999999999998
Q ss_pred EcC
Q 008588 537 RGN 539 (560)
Q Consensus 537 ~~~ 539 (560)
+++
T Consensus 486 ~~~ 488 (496)
T PLN00412 486 INL 488 (496)
T ss_pred Eec
Confidence 764
No 49
>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like. Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).
Probab=100.00 E-value=4.3e-75 Score=630.11 Aligned_cols=395 Identities=17% Similarity=0.176 Sum_probs=328.4
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~-- 73 (454)
T cd07101 2 APFTGEPLGELPQST------PADVEAAFARARAAQRAWAARPFAERAAVFLRFHDLVLERRDELLDLIQLETGKARR-- 73 (454)
T ss_pred cCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 356889999888777 899999999999999999999999999999999999999999999999888765532
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
++. .|+...+..+++++...+ ..+..............+.+|+|+|||++|+|| ||. ++++++++||
T Consensus 74 --~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~AL 143 (454)
T cd07101 74 --HAF--------EEVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPKGVVGVISPWNYPLTLAVSDAIPAL 143 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEeccEEEEECCCccHHHHHHHHHHHHH
Confidence 221 234444444554443211 111110000001123467889999999999997 795 6789999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~- 347 (560)
++||+||+|||+.||+|+.++.+++.+ + +|+|++|+|++ +.++++.|..| +|+|+||||+.+|+.|++.++
T Consensus 144 aaGN~vvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~l~~~--~~~V~fTGs~~~g~~i~~~aa~ 217 (454)
T cd07101 144 LAGNAVVLKPDSQTALTALWAVELLIE----AGLPRDLWQVVTGPGSEVGGAIVDN--ADYVMFTGSTATGRVVAERAGR 217 (454)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCcHHHHHHHHhC--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 7 99999999996 66677777766 689999999999999998774
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 348 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 348 --~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 218 ~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~G~~~~~~~ 296 (454)
T cd07101 218 RLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVY-DEFVRRFVARTRALRLGAALDYGP 296 (454)
T ss_pred cCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 6999999999887531
Q ss_pred --------------------------eE-ecCcc-c--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 008588 417 --------------------------GL-FGGPR-A--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 458 (560)
Q Consensus 417 --------------------------~~-~g~~~-~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 458 (560)
++ +|+.. . .+ ++ | | ++|.+++||+||||++|++|+|+||||+
T Consensus 297 ~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~ 376 (454)
T cd07101 297 DMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIE 376 (454)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEeeCCHHHHHH
Confidence 12 23321 1 12 33 5 2 3578999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc---CCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 459 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF---CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 459 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~---~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
++|+++|||++||||+|.++++++++++++|+|+||++... .+..||||.+.||+|. ++|++|+++||+.|+|
T Consensus 377 ~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~v 452 (454)
T cd07101 377 LANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYAAAWASIDAPMGGMKDSGLGR----RHGAEGLLKYTETQTV 452 (454)
T ss_pred HHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCcCcCCCCCCCCcccccccCc----cchHHHHHHhcceEEE
Confidence 99999999999999999999999999999999999986542 3467999999999873 5699999999999998
Q ss_pred EE
Q 008588 536 LR 537 (560)
Q Consensus 536 ~~ 537 (560)
++
T Consensus 453 ~~ 454 (454)
T cd07101 453 AV 454 (454)
T ss_pred eC
Confidence 63
No 50
>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like. Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.
Probab=100.00 E-value=5e-75 Score=629.84 Aligned_cols=393 Identities=19% Similarity=0.203 Sum_probs=335.4
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
++.+|+.++++...+ .+|+++++++|++||+.|. ++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 3 ~P~tg~~i~~~~~~~------~~dv~~av~~a~~A~~~~~~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~-- 74 (454)
T cd07109 3 DPSTGEVFARIARGG------AADVDRAVQAARRAFESGWLRLSPAERGRLLLRIARLIREHADELARLESLDTGKPL-- 74 (454)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCH--
Confidence 467889999988887 8999999999999999876 9999999999999999999999999999887765432
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
.++ ..|+..+++.++++++..+ ..+...+. ..+...+.+|+|+|||++|+|| ||. ++++++++|
T Consensus 75 --~~a--------~~ev~~~~~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 141 (454)
T cd07109 75 --TQA--------RADVEAAARYFEYYGGAADKLHGETIPL---GPGYFVYTVREPHGVTGHIIPWNYPLQITGRSVAPA 141 (454)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHHH
Confidence 122 2356667777777664332 22322221 1234567889999999999998 795 678999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 346 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a- 346 (560)
|++||+||+|||+.||+|+..+++++.+ + ||+|+||+|++ +.+.++.|..||+||+|+||||+.+|+.|++.+
T Consensus 142 LaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~aa 217 (454)
T cd07109 142 LAAGNAVVVKPAEDAPLTALRLAELAEE----AGLPAGALNVVTGLGAEAGAALVAHPGVDHISFTGSVETGIAVMRAAA 217 (454)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 99999999996 666777788899999999999999999999877
Q ss_pred --CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 347 --KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 347 --~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
.||+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 218 ~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~G~p~~~~ 296 (454)
T cd07109 218 ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIY-DEVLERLVERFRALRVGPGLEDP 296 (454)
T ss_pred hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHH-HHHHHHHHHHHHhCCCCCCcccC
Confidence 48999999999999999999999999999999999987 999999999999999 6999999999886532
Q ss_pred --------------------------eEe-cCccc-----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 --------------------------GLF-GGPRA-----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 --------------------------~~~-g~~~~-----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
+++ |+... .++ + | | +++.+++||+||||++|++|+|+|||
T Consensus 297 ~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deA 376 (454)
T cd07109 297 DLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEEIFGPVLAVMPFDDEAEA 376 (454)
T ss_pred cCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhCCCCCceEEEEecCCHHHH
Confidence 222 33221 233 3 5 2 35899999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCc-CcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNAST-RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~-~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
|+++|+++|||++||||+|.++++++++++++|+|+||+.. ......||||.|.||+|. ++|++|+++||+.|+|
T Consensus 377 i~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k~i 452 (454)
T cd07109 377 IALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYGAGGGIELPFGGVKKSGHGR----EKGLEALYNYTQTKTV 452 (454)
T ss_pred HHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCcCCcccCcCCc----cchHHHHHHHhceeEE
Confidence 99999999999999999999999999999999999999876 344568999999999863 5699999999999998
Q ss_pred E
Q 008588 536 L 536 (560)
Q Consensus 536 ~ 536 (560)
+
T Consensus 453 ~ 453 (454)
T cd07109 453 A 453 (454)
T ss_pred e
Confidence 5
No 51
>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like. NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.
Probab=100.00 E-value=4.5e-75 Score=633.68 Aligned_cols=396 Identities=17% Similarity=0.191 Sum_probs=336.1
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH---HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR---RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~---~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|+++.++|++++.+|.+++
T Consensus 27 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 100 (481)
T cd07141 27 INPATGEKICEVQEGD------KADVDKAVKAARAAFKLGSPWRTMDASERGRLLNKLADLIERDRAYLASLETLDNGKP 100 (481)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCc
Confidence 4567889999887777 8999999999999998 699999999999999999999999999999877665443
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.. ++. ..|+..+++.++++++..+ ..+...+. ..+...+.+++|+|||++|+|| ||. +.++++
T Consensus 101 ~~----~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 166 (481)
T cd07141 101 FS----KSY-------LVDLPGAIKVLRYYAGWADKIHGKTIPM---DGDFFTYTRHEPVGVCGQIIPWNFPLLMAAWKL 166 (481)
T ss_pred hH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEEeceeEEEEEccChhHHHHHHHHH
Confidence 21 111 1356666777777665432 22322211 1233457889999999999998 796 458999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
++||++||+||+|||+.||+|+..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+.+|+.|++
T Consensus 167 ~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~ 242 (481)
T cd07141 167 APALACGNTVVLKPAEQTPLTALYLASLIKE----AGFPPGVVNVVPGYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQ 242 (481)
T ss_pred HHHHHcCCEEEEeCCCCCcHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999986 7 99999999996 5567888889999999999999999999987
Q ss_pred hcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 345 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 345 ~a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
.++ ||++||||||||+||++|||++.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 243 ~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p 321 (481)
T cd07141 243 AAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIY-DEFVKRSVERAKKRVVGNP 321 (481)
T ss_pred HhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCC
Confidence 663 7999999999999999999999999999999999987 999999999999999 6999999998876532
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .+ ++ | | +++++++||+||||++|++|+|+|
T Consensus 322 ~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 401 (481)
T cd07141 322 FDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIFKFKTID 401 (481)
T ss_pred CCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccCCeEEEEeeCCHH
Confidence 12 244321 23 33 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||++....+.+||||.|+||+|. ++|.+|+++||+.|+
T Consensus 402 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~ 477 (481)
T cd07141 402 EVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYNVVSPQAPFGGYKMSGNGR----ELGEYGLQEYTEVKT 477 (481)
T ss_pred HHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCCCCcccCcCCc----cchHHHHHHHhheEE
Confidence 9999999999999999999999999999999999999999877666778999999999863 569999999999999
Q ss_pred EEE
Q 008588 535 ILR 537 (560)
Q Consensus 535 v~~ 537 (560)
|++
T Consensus 478 v~~ 480 (481)
T cd07141 478 VTI 480 (481)
T ss_pred EEE
Confidence 875
No 52
>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like. 4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.
Probab=100.00 E-value=6.6e-75 Score=628.72 Aligned_cols=396 Identities=18% Similarity=0.199 Sum_probs=337.7
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 74 (453)
T cd07115 3 NPATGELIARVAQAS------AEDVDAAVAAARAAFEAWSAMDPAERGRILWRLAELILANADELARLESLDTGKPIR-- 74 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 456788889887777 889999999999999999999999999999999999999999999998877654321
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
++. ..|+..+++.+++++.+.+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (453)
T cd07115 75 --AAR-------RLDVPRAADTFRYYAGWADKIEGEVIPV---RGPFLNYTVREPVGVVGAIVPWNFPLMFAAWKVAPAL 142 (453)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCceecC---CCCceEEEEecceeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 221 1255566666776665432 22322221 1234567889999999999998 796 5679999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~- 347 (560)
++||+||+|||+.||+++..+.+++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.+.
T Consensus 143 aaGN~Vi~Kps~~~p~~~~~l~~~~~~----aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~fTGs~~~g~~v~~~aa~ 218 (453)
T cd07115 143 AAGNTVVLKPAELTPLSALRIAELMAE----AGFPAGVLNVVTGFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGAAG 218 (453)
T ss_pred hcCCEEEEECCCCCcHHHHHHHHHHHh----cCcCchheEEEecCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhh
Confidence 999999999999999999999999987 7 99999999996 5567888888999999999999999999998773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC---------
Q 008588 348 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG--------- 415 (560)
Q Consensus 348 --~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~--------- 415 (560)
||+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.
T Consensus 219 ~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~ 297 (453)
T cd07115 219 NLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIY-DEFLERFTSLARSLRPGDPLDPKT 297 (453)
T ss_pred cCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCcCCCCCCCC
Confidence 8999999999999999999999999999999999877 999999999999999 699999999887652
Q ss_pred -------------------------CeEe-cCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 416 -------------------------VGLF-GGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 416 -------------------------~~~~-g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
.++. |+... .+ ++ | | +++++++||+||||++|++|+|+||||++
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07115 298 QMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFGPVVSVMRFRDEEEALRI 377 (453)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcCceEEEEeeCCHHHHHHH
Confidence 2222 44322 23 33 5 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEEc
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~ 538 (560)
+|+++|||++||||+|.++++++++++++|+|+||+.....+.+||||.++||+|. ++|.+|+++||+.|+++++
T Consensus 378 ~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~f~~~k~~~~~ 452 (453)
T cd07115 378 ANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYNRFDPGSPFGGYKQSGFGR----EMGREALDEYTEVKSVWVN 452 (453)
T ss_pred HhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCcccccCCc----CchHHHHHHhhceEEEEEe
Confidence 99999999999999999999999999999999999877667788999999999863 5699999999999999764
No 53
>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like. Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.
Probab=100.00 E-value=6.3e-75 Score=628.89 Aligned_cols=396 Identities=19% Similarity=0.215 Sum_probs=334.0
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|+++.++|+++++.|++++.
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-- 75 (451)
T cd07150 4 LNPADGSVYARVAVGS------RQDAERAIAAAYDAFPAWAATTPSERERILLKAAEIMERRADDLIDLLIDEGGSTY-- 75 (451)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCH--
Confidence 3567899999988887 89999999999999999999999999999999999999999999999877765442
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
.++. .|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++|
T Consensus 76 --~~a~--------~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~A 143 (451)
T cd07150 76 --GKAW--------FETTFTPELLRAAAGECRRVRGETLPSD--SPGTVSMSVRRPLGVVAGITPFNYPLILATKKVAFA 143 (451)
T ss_pred --HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecccEEEEECCCccHHHHHHHHHHHH
Confidence 1221 245555556665554322 122222211 1234567889999999999998 796 568999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
|++||+||+|||+.+|.|+..+++++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|+++++
T Consensus 144 LaaGN~VilKps~~~p~t~~~l~~~~~~----ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~aa 219 (451)
T cd07150 144 LAAGNTVVLKPSEETPVIGLKIAEIMEE----AGLPKGVFNVVTGGGAEVGDELVDDPRVRMVTFTGSTAVGREIAEKAG 219 (451)
T ss_pred HhcCCeEEEECCccCcHHHHHHHHHHHH----hCCCcCcEEEeeCCCcHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 99999999996 6678888889999999999999999999988763
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+|++||||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 220 ~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~ 298 (451)
T cd07150 220 RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVY-DEFVKKFVARASKLKVGDPRDPD 298 (451)
T ss_pred hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999887 999999999999999 6999999999987632
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 008588 417 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 461 (560)
Q Consensus 417 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 461 (560)
++ +|+.....++ | | ++|.+++||+||||++|++|+|+||||+++|
T Consensus 299 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 378 (451)
T cd07150 299 TVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELAN 378 (451)
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEEeCCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1222111123 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 462 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 462 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++|||++||||+|.++++++++++++|.|+||+++... +..||||.++||+|. ++|++|+++||+.|+|++
T Consensus 379 ~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~l~~~~~~k~v~~ 451 (451)
T cd07150 379 DTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTILDEAHVPFGGVKASGFGR----EGGEWSMEEFTELKWITV 451 (451)
T ss_pred CCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCCcCCccccccCc----CCcHHHHHHhheeeEEeC
Confidence 999999999999999999999999999999999986543 467999999998863 569999999999999863
No 54
>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like. Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.
Probab=100.00 E-value=3.5e-75 Score=629.33 Aligned_cols=394 Identities=20% Similarity=0.226 Sum_probs=336.3
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
++.+|+.++++...+ .+|+++|+++|++||+. |++ +..+|.++|++++++|++|+++|++++++|.+++.
T Consensus 3 nP~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~-~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 74 (455)
T cd07120 3 DPATGEVIGTYADGG------VAEAEAAIAAARRAFDETDWAH-DPRLRARVLLELADAFEANAERLARLLALENGKIL- 74 (455)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 467889999988887 89999999999999985 998 89999999999999999999999999887765432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+...++.++++++..+ ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 75 ---~~a--------~~Ev~~~i~~l~~~~~~~~~~~g~~~~~---~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~ 140 (455)
T cd07120 75 ---GEA--------RFEISGAISELRYYAGLARTEAGRMIEP---EPGSFSLVLREPMGVAGIIVPWNSPVVLLVRSLAP 140 (455)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc---CCCceEEEEEecceeEEEECCCchHHHHHHHHHHH
Confidence 122 2366777777777765332 22322211 1234567889999999999998 695 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.||+++..++++++++ + +|+|++|+|++ +.++++.|..||+|++|+||||+++|+.|++.+
T Consensus 141 AL~aGN~vvlKps~~~~~~~~~l~~~~~~a---ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~a 217 (455)
T cd07120 141 ALAAGCTVVVKPAGQTAQINAAIIRILAEI---PSLPAGVVNLFTESGSEGAAHLVASPDVDVISFTGSTATGRAIMAAA 217 (455)
T ss_pred HHHcCCEEEeECCCCChHHHHHHHHHHHHh---cCCCccceEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999873 4 99999999996 666788888999999999999999999998877
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. ||+++|||||||+||++|||+|.|++.+++++|.|+| +|++++|||||+++| |+|+++|+++++++++
T Consensus 218 a~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~l~~G~p~~~ 296 (455)
T cd07120 218 APTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIA-DEVRDRLAARLAAVKVGPGLDP 296 (455)
T ss_pred HhcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ----------------------------eE-ecCcc-c----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 ----------------------------GL-FGGPR-A----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 ----------------------------~~-~g~~~-~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+.+ . .++ + | | ++|.+++||+||||++|++|+|+|
T Consensus 297 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~E~FgPvl~v~~~~~~d 376 (455)
T cd07120 297 ASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEIFGPVLTLETFDDEA 376 (455)
T ss_pred CCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhCcCcCceEEEeecCCHH
Confidence 12 23322 1 133 3 6 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||++....+..||||.++||+|. ++|++|+++||+.|+
T Consensus 377 eai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~l~~ft~~k~ 452 (455)
T cd07120 377 EAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNKLFAEAEEGGYRQSGLGR----LHGVAALEDFIEYKH 452 (455)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCccccccCc----cchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999987766778999999999863 569999999999999
Q ss_pred EEE
Q 008588 535 ILR 537 (560)
Q Consensus 535 v~~ 537 (560)
|++
T Consensus 453 v~~ 455 (455)
T cd07120 453 IYL 455 (455)
T ss_pred EeC
Confidence 863
No 55
>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.
Probab=100.00 E-value=8e-75 Score=628.25 Aligned_cols=398 Identities=20% Similarity=0.211 Sum_probs=334.1
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQ-ALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~-~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
++.+|+.++.+...+ .+|+++++++|++||+.|+ ++|..+|.++|++++++|++|.++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~w~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 75 (459)
T cd07089 3 NPATEEVIGTAPDAG------AADVDAAIAAARRAFDTGDWSTDAEERARCLRQLHEALEARKEELRALLVAEVGAPVM- 75 (459)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 456888889887777 8999999999999999999 99999999999999999999999999998877655431
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhccccc-cccc-ccccc-cCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQI-LKRTE-LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~-~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
++.. .|+...++.++++++..+. .+.. .+... ...+...+++|+|+|||++|+|| ||. +..++++
T Consensus 76 ---~~~~-------~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~~~ 145 (459)
T cd07089 76 ---TARA-------MQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLA 145 (459)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCceeEEEEeeccEEEEEcCCchHHHHHHHHHH
Confidence 1111 2444555555555432211 1111 11100 01234567899999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||+.+|.++..+.+++.+ + +|+|+||+|++ +.+++..|..||++++|+||||+.+|+.|++.
T Consensus 146 ~AL~aGN~vvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~l~~~~~~~~v~ftGs~~~g~~v~~~ 221 (459)
T cd07089 146 PALAAGNTVVLKPAPDTPLSALLLGEIIAE----TDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSFTGSTAVGRRIMAQ 221 (459)
T ss_pred HHHHcCCEEEEECCCCChHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 55678888899999999999999999999988
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 222 aa~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~ 300 (459)
T cd07089 222 AAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVPRSRY-DEVVEALAAAFEALPVGDPAD 300 (459)
T ss_pred HHhcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCC
Confidence 73 8999999999999999999999999999999999977 999999999999999 6999999999887632
Q ss_pred -----------------------------eE-ecCccc----cccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -----------------------------GL-FGGPRA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -----------------------------~~-~g~~~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .++| | | ++|++++||+||||++|++|+|+|
T Consensus 301 ~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~d 380 (459)
T cd07089 301 PGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDD 380 (459)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcCCCCCHHHhCCCcCceEEEeccCCHH
Confidence 11 233321 2333 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+|. ++|++|+++||+.|+
T Consensus 381 eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~~~~~~~PfgG~k~SG~G~----~~g~~~l~~ft~~k~ 456 (459)
T cd07089 381 EAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGGGYGPDAPFGGYKQSGLGR----ENGIEGLEEFLETKS 456 (459)
T ss_pred HHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCCCCCCCCCcCCcccccCCC----CchHHHHHHhhceeE
Confidence 9999999999999999999999999999999999999999887666678999999998863 569999999999999
Q ss_pred EEE
Q 008588 535 ILR 537 (560)
Q Consensus 535 v~~ 537 (560)
|++
T Consensus 457 v~~ 459 (459)
T cd07089 457 IAY 459 (459)
T ss_pred EeC
Confidence 864
No 56
>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins. ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.
Probab=100.00 E-value=1.3e-74 Score=626.72 Aligned_cols=398 Identities=21% Similarity=0.271 Sum_probs=334.7
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++|.++|++++.+|.+++..
T Consensus 4 ~~P~t~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~- 76 (453)
T cd07094 4 HNPYDGEVIGKVPADD------RADAEEALATARAGAENRRALPPHERMAILERAADLLKKRAEEFAKIIACEGGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH-
Confidence 4567899999987777 899999999999999999999999999999999999999999999998877654422
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
++ ..|+..+++.++++++..+ ..++..+.. ....+...+++++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 145 (453)
T cd07094 77 ---DA--------RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGVVLAITPFNFPLNLVAHKLA 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEeccceEEEECCCccHHHHHHHHHH
Confidence 21 1245555555555543221 112211110 001244567889999999999998 695 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||+.+|+++.++++++.+ + +|+|+||+|++ +.++++.|..||++|+|+||||+++|+.|++.
T Consensus 146 ~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~ 221 (453)
T cd07094 146 PAIATGCPVVLKPASKTPLSALELAKILVE----AGVPEGVLQVVTGEREVLGDAFAADERVAMLSFTGSAAVGEALRAN 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcCcEEEEeCCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999995 56678888889999999999999999999988
Q ss_pred cC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 346 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 346 a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+. +|+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07094 222 AGGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELY-DEFIEAFVAAVKKLKVGDPLDED 300 (453)
T ss_pred cCCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCC
Confidence 84 8999999999999999999999999999999999987 999999999999999 6999999999886532
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 008588 417 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 461 (560)
Q Consensus 417 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 461 (560)
++ +|+.....++ | | ++|.+++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07094 301 TDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLEDVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIAN 380 (453)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEeCCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHh
Confidence 11 1222222233 5 2 3689999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 462 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 462 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++|||++||||+|..+++++++++++|+|+||+++.. .+..||||.|+||+|. ++|.+|+++||+.|+|++
T Consensus 381 ~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~i~~ 453 (453)
T cd07094 381 STDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSSAFRTDWMPFGGVKESGVGR----EGVPYAMEEMTEEKTVVI 453 (453)
T ss_pred CCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCCCCCCCCCCCCCccccccCc----CChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999997654 4678999999999863 579999999999999863
No 57
>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.
Probab=100.00 E-value=1.9e-74 Score=632.55 Aligned_cols=428 Identities=19% Similarity=0.210 Sum_probs=349.3
Q ss_pred CChHHHHHHHHHHHHCC----CcEEEEeCC-----CCchhhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHH
Q 008588 82 GGMTAKVNAAYCAACAG----IPVVITSGF-----AMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR 151 (560)
Q Consensus 82 ggM~~K~~aa~~~~~~g----i~v~I~~g~-----~~~~i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~ 151 (560)
+-|..+++.+..-++.. ++.+| +|. ..-.+.++.+ |+.++++...+ .+|+++++++|++||+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~i-~g~~~~~~~~~~v~~P~t~~~~i~~~~~a~------~~~v~~av~~A~~A~~~ 84 (512)
T cd07124 12 EENRAAFRAALARVREELGREYPLVI-GGKEVRTEEKIESRNPADPSEVLGTVQKAT------KEEAEAAVQAARAAFPT 84 (512)
T ss_pred HHHHHHHHHHHHHHHhhcccccceeE-CCEEecCCCeEEeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHH
Confidence 34566666665555543 34444 443 1223456776 88889888887 89999999999999999
Q ss_pred HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccc
Q 008588 152 LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQIL 230 (560)
Q Consensus 152 w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~ 230 (560)
|+++|..+|.++|++++++|++|.++|++++++|++++. .++. .|+...++.++++++..+ ..+...
T Consensus 85 W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~ea~--------~ev~~~i~~~~~~~~~~~~~~~~~~ 152 (512)
T cd07124 85 WRRTPPEERARLLLRAAALLRRRRFELAAWMVLEVGKNW----AEAD--------ADVAEAIDFLEYYAREMLRLRGFPV 152 (512)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCH----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccc
Confidence 999999999999999999999999999999887765542 1221 245555555665553322 112221
Q ss_pred cccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCc
Q 008588 231 KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKL 307 (560)
Q Consensus 231 ~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gv 307 (560)
+. ..+...+++++|+|||++|+|| ||. +.+++++|||++||+||+|||+.||+++..+++++.+ + +|+|+
T Consensus 153 ~~---~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gv 225 (512)
T cd07124 153 EM---VPGEDNRYVYRPLGVGAVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEE----AGLPPGV 225 (512)
T ss_pred cC---CCCceeEEEEecceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCCCc
Confidence 11 1233467889999999999998 796 5689999999999999999999999999999999987 6 99999
Q ss_pred EEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---------CCEEEecCccceEEEcCCCCHHHHHHHHHh
Q 008588 308 IGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---------IPVLGHADGICHVYVDKSANLDVAKNIVID 377 (560)
Q Consensus 308 v~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---------~~~~lElGGk~p~iV~~dADld~Aa~~iv~ 377 (560)
||+|++ +.++++.|..||++|+|+||||+.+|+.|++.+. ||+++|||||||+||++|||+|.|++.+++
T Consensus 226 v~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~ 305 (512)
T cd07124 226 VNFLPGPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVR 305 (512)
T ss_pred eEEeccCchHHHHHHhcCCCCCEEEEeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHH
Confidence 999996 6678888999999999999999999999987653 699999999999999999999999999999
Q ss_pred hcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---------------------------------eE-ecCc
Q 008588 378 AKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV---------------------------------GL-FGGP 422 (560)
Q Consensus 378 ~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~---------------------------------~~-~g~~ 422 (560)
++|.|+| .|++++|||||+++| |+|+++|+++++++.+ ++ +|+.
T Consensus 306 ~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~ 384 (512)
T cd07124 306 SAFGFQGQKCSACSRVIVHESVY-DEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGE 384 (512)
T ss_pred HHHhhCCCccccceEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCc
Confidence 9999987 999999999999999 6999999999886532 11 2332
Q ss_pred cc----cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeee
Q 008588 423 RA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA 490 (560)
Q Consensus 423 ~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~ 490 (560)
.. .++| | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+
T Consensus 385 ~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~ 464 (512)
T cd07124 385 VLELAAEGYFVQPTIFADVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGN 464 (512)
T ss_pred cCCCCCCCceEcCEEEecCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcce
Confidence 21 2333 6 2 358999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCcCcC--CCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 491 VFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 491 V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
|+||+..... +..||||.+.||+|. +.+|.+|+++||+.|+|++.+
T Consensus 465 v~vN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~~~~~t~~k~v~~~~ 512 (512)
T cd07124 465 LYANRKITGALVGRQPFGGFKMSGTGS---KAGGPDYLLQFMQPKTVTENF 512 (512)
T ss_pred EEECCCCCCCCCCCCCCCccccccCCC---ccCcHHHHHHhccEEEEEEeC
Confidence 9999875432 458999999998862 235799999999999998753
No 58
>TIGR01804 BADH glycine betaine aldehyde dehydrogenase. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).
Probab=100.00 E-value=4.4e-75 Score=632.15 Aligned_cols=393 Identities=16% Similarity=0.190 Sum_probs=334.9
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
..++.+|+.++.+...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++.
T Consensus 17 ~~nP~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~- 89 (467)
T TIGR01804 17 IINPANQEVIATVAEAT------REDVERAIAAARRAQGEWASMTPEERGRILRRIAELIRERNEELAKLETLDTGKTL- 89 (467)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 34667888888887777 89999999999999999999999999999999999999999999999877765442
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.+++ ..|+..+++.++++++..+. .+...+. ......+.+|+|+|||++|+|| ||. +.+++++|
T Consensus 90 ---~~a~-------~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (467)
T TIGR01804 90 ---EETS-------VADMDDIADVFEFFAGLADKDGGEIIPL---PIPSFSYTIREPLGVCVGIGAWNYPLQIASWKIAP 156 (467)
T ss_pred ---HHHh-------HHHHHHHHHHHHHHHHHHHHhCCccccC---CCCceEEEEEeeeeEEEEECCCchHHHHHHHHHHH
Confidence 1221 23667777777777654332 2222211 1113457889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.||.++..+++++.+ + +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++++
T Consensus 157 ALaaGN~VvlKps~~tp~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a 232 (467)
T TIGR01804 157 ALAAGNAMVFKPSEITPLTALKVAELMEE----AGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVSFTGGVPTGKKIMAAA 232 (467)
T ss_pred HHhcCCEEEeeCCccCcHHHHHHHHHHHH----cCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999986 7 99999999996 467888888999999999999999999999887
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 233 ~~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 311 (467)
T TIGR01804 233 ADHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIK-EKFEARLVERTKRIKLGDGFDE 311 (467)
T ss_pred HhcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 6999999998876521
Q ss_pred ----------------------------eE-ecCccc------ccc-c-c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 417 ----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 417 ----------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
++ +|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 312 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~ 391 (467)
T TIGR01804 312 ATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVREEIFGPVMTVLTFSSE 391 (467)
T ss_pred CCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhCCCCCceEEEEecCCH
Confidence 12 243321 133 3 5 2 36889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
||||+++|+++|||++||||+|.+++++|++++++|+|+||+........||||.|.||+|. ++|.+|+++||+.|
T Consensus 392 deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~~~~~ 467 (467)
T TIGR01804 392 DEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFHPYPAEAPWGGYKQSGIGR----ENGKAGLAEYTEVK 467 (467)
T ss_pred HHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccCccCC----CChHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999977666678999999999863 56999999999875
No 59
>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like. Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.
Probab=100.00 E-value=8.8e-75 Score=627.11 Aligned_cols=394 Identities=21% Similarity=0.241 Sum_probs=335.4
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
++.+|+.++++...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~- 75 (454)
T cd07118 3 SPAHGVVVARYAEGT------VEDVDAAVAAARKAFDKGPWPRMSGAERAAVLLKVADLIRARRERLALIETLESGKPI- 75 (454)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 356788999988887 89999999999999985 999999999999999999999999999998876665432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+...++.+++++...+ ..+...+. ...+...+++|+|+|||++|+|| ||+ +.++++++
T Consensus 76 ---~~a--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~i~~ 142 (454)
T cd07118 76 ---SQA--------RGEIEGAADLWRYAASLARTLHGDSYNN--LGDDMLGLVLREPIGVVGIITPWNFPFLILSQKLPF 142 (454)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceeeEEeecceEEEEECCCCcHHHHHHHHHHH
Confidence 121 2466777777777664322 12222111 11233457889999999999997 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.+|.++.++++++++ + +|+|+||+|++ +.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 143 ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~----aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~i~~~a 218 (454)
T cd07118 143 ALAAGCTVVVKPSEFTSGTTLMLAELLIE----AGLPAGVVNIVTGYGATVGQAMTEHPDVDMVSFTGSTRVGKAIAAAA 218 (454)
T ss_pred HHhcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCccceEEEecCCchHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999995 556788888999999999999999999999877
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
.+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 a~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~g~p~~~ 297 (454)
T cd07118 219 ARNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIA-DAFVAAVVARSRKVRVGDPLDP 297 (454)
T ss_pred HhcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCC
Confidence 38999999999999999999999999999999999977 999999999999999 6999999999887532
Q ss_pred ----------------------------eE-ecCccc---cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 ----------------------------GL-FGGPRA---SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 ----------------------------~~-~g~~~~---~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ +|+... .++| | | +++.+++||+||||++|++|+|+|||
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ea 377 (454)
T cd07118 298 ETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFGPVLSVLTFDTVDEA 377 (454)
T ss_pred CCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCCCCCceEEEEEECCHHHH
Confidence 11 233321 2333 5 2 35789999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
|+++|+++|||++||||+|.++++++++++++|.|+||+.....+..||||.+.||+|. ++|++|+++||+.|+++
T Consensus 378 i~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~----~~g~~~l~~~t~~k~~~ 453 (454)
T cd07118 378 IALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLDGSPELPFGGFKQSGIGR----ELGRYGVEEYTELKTVH 453 (454)
T ss_pred HHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCCCCCCCCcCCcccccCCc----CchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999987666778999999998763 56999999999999985
No 60
>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like. Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.
Probab=100.00 E-value=9.1e-75 Score=632.02 Aligned_cols=397 Identities=20% Similarity=0.228 Sum_probs=337.7
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.++.+|+.++++...+ .+|+++++++|++||+ .|+++|..+|.++|++++++|+++.++|++++++|++++.
T Consensus 18 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 91 (482)
T cd07119 18 INPANGEVIATVPEGT------AEDAKRAIAAARRAFDSGEWPHLPAQERAALLFRIADKIREDAEELARLETLNTGKTL 91 (482)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888889887777 8999999999999997 5999999999999999999999999999999887765432
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
.++. .|+...++.+++++...+ ..+...+. ..+...+++|+|+|||++|+|| ||. +..++++
T Consensus 92 ----~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~ 156 (482)
T cd07119 92 ----RESE--------IDIDDVANCFRYYAGLATKETGEVYDV---PPHVISRTVREPVGVCGLITPWNYPLLQAAWKLA 156 (482)
T ss_pred ----HHHH--------HHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeeeeeEEEEcCCchHHHHHHHHHH
Confidence 1221 356666666776654332 22322221 1234567899999999999998 796 5679999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||+.+|+|+.++++++.+ + +|+|++|+|++ ++++++.|..||++|+|+||||+++|++|+++
T Consensus 157 ~ALaaGN~VilKps~~~p~~~~~l~~~~~~----aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 232 (482)
T cd07119 157 PALAAGNTVVIKPSEVTPLTTIALFELIEE----AGLPAGVVNLVTGSGATVGAELAESPDVDLVSFTGGTATGRSIMRA 232 (482)
T ss_pred HHHhcCCEEEEECCccccHHHHHHHHHHHH----cCCCcCcEEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 999999999999999999999999999987 7 99999999996 55578888889999999999999999999987
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
+. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 233 aa~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~G~~~~ 311 (482)
T cd07119 233 AAGNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIH-DKFVAALAERAKKIKLGNGLD 311 (482)
T ss_pred HHhcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCC
Confidence 73 8999999999999999999999999999999999977 999999999999999 6999999999887532
Q ss_pred -----------------------------eE-ecCccc------cccc--c-C-----CCCCcccccccCceEEEEEeCC
Q 008588 417 -----------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDD 452 (560)
Q Consensus 417 -----------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~ 452 (560)
++ +|+.+. .++| | | ++|.+++||+||||++|++|+|
T Consensus 312 ~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~ 391 (482)
T cd07119 312 ADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEIFGPVLTVERFDT 391 (482)
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhCCCCCceEEEeccCC
Confidence 12 244321 1333 5 2 3678999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEE
Q 008588 453 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 453 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
+||||+++|+++|||++||||+|.++++++++++++|+|+||+.....+..||||.+.||+|. ++|++|+++||+.
T Consensus 392 ~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~G~~~l~~~t~~ 467 (482)
T cd07119 392 EEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYHPYFAEAPWGGYKQSGIGR----ELGPTGLEEYQET 467 (482)
T ss_pred HHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHHhce
Confidence 999999999999999999999999999999999999999999876556678999999998863 5699999999999
Q ss_pred EEEEEcC
Q 008588 533 RWILRGN 539 (560)
Q Consensus 533 K~v~~~~ 539 (560)
|+|++.+
T Consensus 468 k~v~~~~ 474 (482)
T cd07119 468 KHININL 474 (482)
T ss_pred EEEEEec
Confidence 9998864
No 61
>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.
Probab=100.00 E-value=2e-74 Score=626.55 Aligned_cols=397 Identities=18% Similarity=0.180 Sum_probs=331.4
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++|+++|++|| ++++..+|.++|++++++|++|.+||++++++|++++..
T Consensus 22 ~~P~t~~~i~~~~~~~------~~~v~~av~~A~~a~---~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~- 91 (472)
T TIGR03250 22 RYPYNGTVVGTVPKAS------VDDVRRAFAIAAAYR---PTLTRYERSAILDRAAALLAARKEEISDLITLESGLSKK- 91 (472)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH-
Confidence 4567888899988777 889999999999886 578999999999999999999999999998877655421
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccc--ccCCCeeEEEeecce-EEEEEEcCC-Chh-hHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRT--ELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~~ 266 (560)
++ ..|+...++.+++++.... ..+...+.. ....+...+++|+|+ |||++|+|| ||. +.++++
T Consensus 92 ---~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~Gvv~~I~P~N~P~~~~~~~~ 160 (472)
T TIGR03250 92 ---DS--------LYEVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQREPLLGVISAITPFNHPMNQVAHKI 160 (472)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEEcCCCCEEEEEcCCcHHHHHHHHHH
Confidence 22 2356667777777664332 222221100 001133567889998 999999998 796 567999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.||+++.++++++.+ + +|+|+||+|++ +.+.+..|..||+||+|+||||+++|+.|++
T Consensus 161 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~ 236 (472)
T TIGR03250 161 APAIATNNRMVVKPSEKTPLSALYLADILYE----AGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAA 236 (472)
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCCCcccEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 6 99999999996 5667788888999999999999999999998
Q ss_pred hcC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 345 STK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 345 ~a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
.+. +|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 237 ~a~~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~G~p~~~ 315 (472)
T TIGR03250 237 RAGYRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA-DRFTELLVEKTRAWRYGDPMDP 315 (472)
T ss_pred HhcCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 774 8999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ----------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHH
Q 008588 417 ----------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHI 460 (560)
Q Consensus 417 ----------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~a 460 (560)
++ +|+.....++ | | ++|.+++||+||||++|++|+|+||||+++
T Consensus 316 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PTvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~a 395 (472)
T TIGR03250 316 SVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRIS 395 (472)
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCEEEeCCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHH
Confidence 11 1222212233 5 2 368999999999999999999999999999
Q ss_pred HhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEEc
Q 008588 461 HQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 461 N~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~ 538 (560)
|+++|||++||||+|.++++++++++++|+||||+.+... +.+||||.|.||+|. +.+|.+|+++||+.|+++++
T Consensus 396 N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~---~~g~~~~l~~ft~~k~i~~~ 471 (472)
T TIGR03250 396 NSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVPGYRLELTPFGGIKDSGLGY---KEGVQEAMKSFTNLKTYSLP 471 (472)
T ss_pred hCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCCCCCCCCCCCCccccccCCC---CCChHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999875443 458999999999863 13468999999999999875
No 62
>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative. This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.
Probab=100.00 E-value=2.6e-74 Score=631.03 Aligned_cols=398 Identities=17% Similarity=0.179 Sum_probs=333.0
Q ss_pred hhhh-cCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~-~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++. +|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|+++++.|.+++..
T Consensus 51 ~~P~~~~~~i~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 124 (511)
T TIGR01237 51 INPCDPSEVVGKVGKAS------VEQAEHALQIAKKAFEAWKKTPVRERAGILRKAAAIMERRRHELNALICLEVGKIIP 124 (511)
T ss_pred ECCCCCCcEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHH
Confidence 4566 478888877777 899999999999999999999999999999999999999999999988776654421
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
++ ..|+...++.++++++..+ ..+...+. ...+...+++|+|+|||++|+|| ||. +.+++++|
T Consensus 125 ----~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVV~~I~P~N~P~~~~~~~i~~ 190 (511)
T TIGR01237 125 ----EA--------DAEVAEAIDFCEYYAREMERLAGQGVNL--DIEGETNRYFYQPRGVAVVISPWNFPMAIAVGMTVA 190 (511)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--CCCCceeEEEEecceeEEEECCCCcHHHHHHHHHHH
Confidence 21 1245556666666554322 11221111 01233467889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.||+++..+++++.+ + +|+|+||+|++ +.++++.|..||++++|+||||+++|+.|++.+
T Consensus 191 ALaaGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~a 266 (511)
T TIGR01237 191 PIVTGNCVVLKPAETSTVIAAKIVEILIE----AGLPPGVFQFVPGKGSEVGSYLVNHPKTHLITFTGSREVGCRIYEDA 266 (511)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEccCCCchhHHHHhcCCCCCeEEEECchHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999996 667888888999999999999999999998766
Q ss_pred C---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC
Q 008588 347 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 416 (560)
Q Consensus 347 ~---------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~ 416 (560)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 267 a~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~ 345 (511)
T TIGR01237 267 AKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVY-DAVVERFVEATRSLNV 345 (511)
T ss_pred hcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHH-HHHHHHHHHHHHhCCC
Confidence 3 6999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ---------------------------------e-EecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeCC
Q 008588 417 ---------------------------------G-LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 452 (560)
Q Consensus 417 ---------------------------------~-~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 452 (560)
+ +.|+... .++ + | | ++|++++||+||||++|++|+|
T Consensus 346 g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPVl~v~~~~~ 425 (511)
T TIGR01237 346 GPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIFKDVDRHARLAQEEIFGPVVAIIRAAD 425 (511)
T ss_pred CCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEEeCCCCCChHhhCCCcCCeEEEEeeCC
Confidence 1 1233221 133 3 5 2 3588999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhcce
Q 008588 453 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLL 530 (560)
Q Consensus 453 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft 530 (560)
+||||+++|+++|||++||||+|.++++++++++++|+|+||+..... ...||||.|.||+|. +.+|++|+++||
T Consensus 426 ~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~~~ 502 (511)
T TIGR01237 426 FDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTITGAIVGRQPFGGFKMSGTDS---KAGGPDYLLQFM 502 (511)
T ss_pred HHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---cCCCHHHHHHhc
Confidence 999999999999999999999999999999999999999999875432 357999999999862 235899999999
Q ss_pred EEEEEEEc
Q 008588 531 TTRWILRG 538 (560)
Q Consensus 531 ~~K~v~~~ 538 (560)
+.|+|+.+
T Consensus 503 ~~k~v~~~ 510 (511)
T TIGR01237 503 QPKTVTEN 510 (511)
T ss_pred ceEEEEEe
Confidence 99999764
No 63
>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins. ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co
Probab=100.00 E-value=1.3e-74 Score=629.97 Aligned_cols=397 Identities=17% Similarity=0.187 Sum_probs=337.4
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHH--hhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.| +++|.++|.++|++++++|++|.++|++++.+|++++
T Consensus 23 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 96 (476)
T cd07091 23 TINPATEEVICQVAEAD------EEDVDAAVKAARAAFETGWWRKMDPRERGRLLNKLADLIERDRDELAALESLDNGKP 96 (476)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 35677888899887777 899999999999999985 5999999999999999999999999999987766543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.. +.. ..|+..+++.+++++++.+ ..+...+. ..+...+++++|+|||++|+|| ||. ++++++
T Consensus 97 ~~----~~~-------~~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~ 162 (476)
T cd07091 97 LE----ESA-------KGDVALSIKCLRYYAGWADKIQGKTIPI---DGNFLAYTRREPIGVCGQIIPWNFPLLMLAWKL 162 (476)
T ss_pred HH----HHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceEEEEEeceeEEEEECCCcCHHHHHHHHH
Confidence 21 111 2367777777777765432 22332221 1234467889999999999998 796 567999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.||.++.++++++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+++|+.|++
T Consensus 163 ~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~----aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~fTGs~~~g~~v~~ 238 (476)
T cd07091 163 APALAAGNTVVLKPAEQTPLSALYLAELIKE----AGFPPGVVNIVPGFGPTAGAAISSHMDVDKIAFTGSTAVGRTIME 238 (476)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCCCcEEEEeCCChhHHHHHhcCCCcCEEEEECcHHHHHHHHH
Confidence 9999999999999999999999999999987 7 99999999996 6677888889999999999999999999998
Q ss_pred hcC----CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 345 STK----IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 345 ~a~----~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
++. +|+++|||||||+||++|||||.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 239 ~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-~~f~~~L~~~~~~~~~g~p 317 (476)
T cd07091 239 AAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIY-DEFVEKFKARAEKRVVGDP 317 (476)
T ss_pred HHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHH-HHHHHHHHHHHhhCCCCCC
Confidence 763 7999999999999999999999999999999999977 999999999999999 6999999999887532
Q ss_pred -------------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -------------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -------------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+|
T Consensus 318 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 397 (476)
T cd07091 318 FDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFGPVVTILKFKTED 397 (476)
T ss_pred CCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCCCeEEEeecCCHH
Confidence 11 233221 22 33 5 2 357899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||++||||+|.++++++++++++|+|+||+.+...+.+||||.|.||+|. ++|.+|+++||+.|+
T Consensus 398 eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k~ 473 (476)
T cd07091 398 EVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYNVFDAAVPFGGFKQSGFGR----ELGEEGLEEYTQVKA 473 (476)
T ss_pred HHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCc----cchHHHHHHhhceeE
Confidence 9999999999999999999999999999999999999999977667788999999999863 579999999999999
Q ss_pred EEE
Q 008588 535 ILR 537 (560)
Q Consensus 535 v~~ 537 (560)
|++
T Consensus 474 ~~~ 476 (476)
T cd07091 474 VTI 476 (476)
T ss_pred EeC
Confidence 863
No 64
>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=4.5e-74 Score=626.04 Aligned_cols=397 Identities=17% Similarity=0.126 Sum_probs=329.4
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|..+|.++|++++++|++|.++|++++++|.+++.
T Consensus 19 ~~~P~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 91 (487)
T PRK09457 19 SRNPVSGEVLWQGNDAT------AAQVDAAVRAARAAFPAWARLSFEERQAIVERFAALLEENKEELAEVIARETGKPL- 91 (487)
T ss_pred EECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCH-
Confidence 45678899999987777 89999999999999999999999999999999999999999999999876665432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++. .|+..+++.++++++.. +..+..... ..+...+++|+|+|||++|+|| ||. +..+++++
T Consensus 92 ---~~a~--------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 157 (487)
T PRK09457 92 ---WEAA--------TEVTAMINKIAISIQAYHERTGEKRSE---MADGAAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 157 (487)
T ss_pred ---HHHH--------HHHHHHHHHHHHHHHHHHHhcCceecc---CCCceeEEEEeccEEEEEECCCchHHHHHHHHHHH
Confidence 1221 24555555555443211 111221111 1233457889999999999998 796 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a- 346 (560)
||++||+||+|||+.||+|+.++++++.+ + +|+|+||+|+++.++++.|..||+||+|+||||+++|+.|++++
T Consensus 158 ALaaGN~VvlKPs~~tp~t~~~l~~l~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~fTGS~~~G~~i~~~aa 233 (487)
T PRK09457 158 ALLAGNTVVFKPSELTPWVAELTVKLWQQ----AGLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFA 233 (487)
T ss_pred HHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999987 6 99999999997656788888999999999999999999999864
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccC-CcchHHHHHHHHHhcCC-----
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLA-CNGALNELVVELQHEGV----- 416 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~-dd~f~~~l~~~~~~~~~----- 416 (560)
.++++||||||||+||++|||+|.|++.+++++|.|+| .|++++|||||+++| | +|+++|+++++++++
T Consensus 234 ~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d-~f~~~l~~~~~~~~vG~p~~ 312 (487)
T PRK09457 234 GQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGD-AFLARLVAVAKRLTVGRWDA 312 (487)
T ss_pred hcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHH-HHHHHHHHHHhcCcCCCCCc
Confidence 26789999999999999999999999999999999987 999999999999997 7 999999999876532
Q ss_pred ------------------------------eE-ecCccc--c-ccc-c-C----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 ------------------------------GL-FGGPRA--S-KLL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 ------------------------------~~-~g~~~~--~-~~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ .|+... . .++ | | ++|++++||+||||++|++|+|+|||
T Consensus 313 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~v~~~~~i~~eE~FGPVl~V~~~~~~dea 392 (487)
T PRK09457 313 EPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGIIDVTGVAELPDEEYFGPLLQVVRYDDFDEA 392 (487)
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEeccCCCChHHhCCCcCCeEEEEEeCCHHHH
Confidence 11 122111 1 233 5 2 35889999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
|+++|+++|||++||||+|.++++++++++++|+|+||++.... +.+||||.+.||+|+ ++| ....+||+.|++
T Consensus 393 i~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g-~~~~~~~~~k~~ 467 (487)
T PRK09457 393 IRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLTGASSAAPFGGVGASGNHR----PSA-YYAADYCAYPMA 467 (487)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCCCCcccccCCC----CCc-hhHhhheeeeEE
Confidence 99999999999999999999999999999999999999875433 468999999999863 346 445669999999
Q ss_pred EEcC
Q 008588 536 LRGN 539 (560)
Q Consensus 536 ~~~~ 539 (560)
++.+
T Consensus 468 ~~~~ 471 (487)
T PRK09457 468 SLES 471 (487)
T ss_pred EEec
Confidence 8875
No 65
>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like. Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.
Probab=100.00 E-value=3.8e-74 Score=626.77 Aligned_cols=399 Identities=18% Similarity=0.194 Sum_probs=333.4
Q ss_pred hhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++.+ ++.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++++|++++.
T Consensus 19 ~~P~t~~~~~~~~~~~~------~~~v~~av~~a~~A~~~w~~~~~~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~- 91 (478)
T cd07131 19 RNPADLEEVVGTFPLST------ASDVDAAVEAAREAFPEWRKVPAPRRAEYLFRAAELLKKRKEELARLVTREMGKPL- 91 (478)
T ss_pred ECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-
Confidence 45666 56778877776 88999999999999999999999999999999999999999999998876654432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||. +..+++++
T Consensus 92 ---~~~--------~~ev~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ 158 (478)
T cd07131 92 ---AEG--------RGDVQEAIDMAQYAAGEGRRLFGETVPSE--LPNKDAMTRRQPIGVVALITPWNFPVAIPSWKIFP 158 (478)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhCCcccccC--CCCceEEEEeeceeEEEEECCcCcHHHHHHHHHHH
Confidence 121 1355556666665553322 122222111 1123467889999999999997 796 56789999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 159 ALaaGN~VvlKps~~~p~~~~~l~~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~~~a 234 (478)
T cd07131 159 ALVCGNTVVFKPAEDTPACALKLVELFAE----AGLPPGVVNVVHGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETC 234 (478)
T ss_pred HHHcCCEEEEECCCcCcHHHHHHHHHHHh----cCcCCCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 555888888999999999999999999998877
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
.||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|+++++++++
T Consensus 235 a~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~ 313 (478)
T cd07131 235 ARPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVY-DEFLKRFVERAKRLRVGDGLDE 313 (478)
T ss_pred hhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ----------------------------eE-ecCccc------ccc-c-c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 417 ----------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 417 ----------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
++ .|+... .++ + | | +++++++||+||||++|++|+|+
T Consensus 314 ~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~ 393 (478)
T cd07131 314 ETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQEEIFGPVVALIEVSSL 393 (478)
T ss_pred CCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhhCCCcCCeEEEEEeCCH
Confidence 11 233221 133 3 6 3 35789999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
||||+++|+++|||++||||+|.+++++|++++++|+|+||+++.. .+.+||||.++||+|. +++|.+|+++||+.
T Consensus 394 ~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~~pfgG~k~SG~G~---~~~g~~~~~~f~~~ 470 (478)
T cd07131 394 EEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTIGAEVHLPFGGVKKSGNGH---REAGTTALDAFTEW 470 (478)
T ss_pred HHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCCCCCCCCCCCCcccccCCC---cCCcHHHHHHhhhe
Confidence 9999999999999999999999999999999999999999987654 4578999999999762 23589999999999
Q ss_pred EEEEEcC
Q 008588 533 RWILRGN 539 (560)
Q Consensus 533 K~v~~~~ 539 (560)
|+|++++
T Consensus 471 k~i~~~~ 477 (478)
T cd07131 471 KAVYVDY 477 (478)
T ss_pred EEEEEeC
Confidence 9998754
No 66
>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like. Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.
Probab=100.00 E-value=3.7e-74 Score=624.78 Aligned_cols=403 Identities=20% Similarity=0.220 Sum_probs=334.3
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|+++++.|++++
T Consensus 2 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~---- 71 (465)
T cd07098 2 DPATGQHLGSVPADT------PEDVDEAIAAARAAQREWAKTSFAERRKVLRSLLKYILENQEEICRVACRDTGKT---- 71 (465)
T ss_pred CCCCCCeeEEeeCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC----
Confidence 456889999988777 8999999999999999999999999999999999999999999999988776543
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhccccc-c-cccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEEP-I-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
+.++.. .|+...++.++++++.... . ....+......+...+++++|+|||++|+|| ||. ...+++++|
T Consensus 72 ~~~a~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n~P~~~~~~~~~~A 144 (465)
T cd07098 72 MVDASL-------GEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEPLGVVGAIVSWNYPFHNLLGPIIAA 144 (465)
T ss_pred HHHHHH-------HHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEecceeEEEEcccCcHHHHHHHHHHHH
Confidence 223222 2344444445444322110 0 1111100001123456789999999999998 796 457899999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 346 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a-- 346 (560)
|++||+||+|||+++|+|+..+++++.++|.++ +|+|+||+|+++.++++.|..||+|++|+||||+.+|+.|++.+
T Consensus 145 LaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~ftGs~~~g~~v~~~a~~ 224 (465)
T cd07098 145 LFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMAAAAE 224 (465)
T ss_pred HHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999999988889 99999999997446788888999999999999999999999877
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 347 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 347 -~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
.||+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 225 ~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~G~p~~~~~ 303 (465)
T cd07098 225 SLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY-DKLLEILTDRVQALRQGPPLDGDV 303 (465)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 39999999999999999999999999999999999987 999999999999999 6999999998876521
Q ss_pred --------------------------eE-ecCccc------cccc--c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 --------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 --------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +|+... .+.| | | +++.+++||+||||++|++|+|+||
T Consensus 304 ~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 383 (465)
T cd07098 304 DVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTPDMKIAQEEVFGPVMVVMKASDDEE 383 (465)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCCCCHHHhCCCcCCeEEEEEeCCHHH
Confidence 22 233221 1333 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
||+++|+++|||++||||+|.++++++++++++|.|+||+.... .+..||||.|.||+|. ++|++|+++||+.|
T Consensus 384 ai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k 459 (465)
T cd07098 384 AVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFGVNYYVQQLPFGGVKGSGFGR----FAGEEGLRGLCNPK 459 (465)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCcCccccccCCc----cChHHHHHHhheeE
Confidence 99999999999999999999999999999999999999986432 3568999999999863 56999999999999
Q ss_pred EEEEc
Q 008588 534 WILRG 538 (560)
Q Consensus 534 ~v~~~ 538 (560)
+|+++
T Consensus 460 ~~~~~ 464 (465)
T cd07098 460 SVTED 464 (465)
T ss_pred EEEEe
Confidence 99763
No 67
>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like. Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.
Probab=100.00 E-value=3.2e-74 Score=625.96 Aligned_cols=397 Identities=18% Similarity=0.220 Sum_probs=335.2
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.++...
T Consensus 17 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 90 (468)
T cd07088 17 VLNPATGEVVATVPAAT------AEDADRAVDAAEAAQKAWERLPAIERAAYLRKLADLIRENADELAKLIVEEQGKTLS 90 (468)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHH
Confidence 34567888899888777 889999999999999999999999999999999999999999999988766554321
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
++ ..|+...++.+++++.+.+ ..+...+.. ..+...+.+++|+|||++|+|| ||. +.++++++
T Consensus 91 ----~a--------~~ev~~~~~~l~~~~~~a~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 156 (468)
T cd07088 91 ----LA--------RVEVEFTADYIDYMAEWARRIEGEIIPSD--RPNENIFIFKVPIGVVAGILPWNFPFFLIARKLAP 156 (468)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhCCccccCc--cccceeEEEEecceeEEEEccCchHHHHHHHHHHH
Confidence 22 1355556666666554322 122222211 1133467889999999999998 796 46799999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.+|+++..+++++++ + +|+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++.+
T Consensus 157 AL~aGN~VVlKps~~~p~~~~~l~~~~~~----aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~a 232 (468)
T cd07088 157 ALVTGNTIVIKPSEETPLNALEFAELVDE----AGLPAGVLNIVTGRGSVVGDALVAHPKVGMISLTGSTEAGQKIMEAA 232 (468)
T ss_pred HHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 6 99999999996 556778888899999999999999999998876
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. ||+++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|+++++++++
T Consensus 233 a~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~ 311 (468)
T cd07088 233 AENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIY-DEFMEKLVEKMKAVKVGDPFDA 311 (468)
T ss_pred HhcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 999999999999999 6999999999887532
Q ss_pred ----------------------------eE-ecCccc---cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 ----------------------------GL-FGGPRA---SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 ----------------------------~~-~g~~~~---~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+|||
T Consensus 312 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ea 391 (468)
T cd07088 312 ATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPVLPVVKFSSLDEA 391 (468)
T ss_pred CCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCCcCCeEEEEecCCHHHH
Confidence 11 233221 23 33 5 2 35789999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
|+++|+++|||++||||+|.+++++|++++++|.|+||++.......||||.+.||+|. ++|++|+++||+.|+|+
T Consensus 392 i~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~p~gG~k~SG~G~----~~g~~~l~~~t~~k~v~ 467 (468)
T cd07088 392 IELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENFEAMQGFHAGWKKSGLGG----ADGKHGLEEYLQTKVVY 467 (468)
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcccccCCc----CchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999999887655567999999999873 56999999999999986
Q ss_pred E
Q 008588 537 R 537 (560)
Q Consensus 537 ~ 537 (560)
+
T Consensus 468 ~ 468 (468)
T cd07088 468 L 468 (468)
T ss_pred C
Confidence 3
No 68
>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like. NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.
Probab=100.00 E-value=3.8e-74 Score=623.43 Aligned_cols=395 Identities=21% Similarity=0.221 Sum_probs=333.7
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++..
T Consensus 3 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (457)
T cd07108 3 NPATGQVIGEVPRSR------AADVDRAVAAAKAAFPEWAATPARERGKLLARIADALEARSEELARLLALETGNALR-- 74 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcH--
Confidence 567889999987777 899999999999999999999999999999999999999999999999877765420
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
.++ ..|+..+++.+++++.+.. ..+...+. ..+...+..|+|+|||++|+|| ||. +.++++++||
T Consensus 75 -~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~AL 142 (457)
T cd07108 75 -TQA--------RPEAAVLADLFRYFGGLAGELKGETLPF---GPDVLTYTVREPLGVVGAILPWNAPLMLAALKIAPAL 142 (457)
T ss_pred -HHH--------HHHHHHHHHHHHHHHHHHHHhCCceecc---CCCeeEEEEeecceEEEEECCCchHHHHHHHHHHHHH
Confidence 111 2356666677777664332 12222221 1234557889999999999998 796 5679999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-- 347 (560)
++||+||+|||+.||.++.++++++.+ ++|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|++.++
T Consensus 143 aaGN~VVlKps~~~p~~~~~l~~~~~~----~lP~~~~~~v~g~~~~~~~~L~~~~~vd~v~ftGs~~~g~~v~~~aa~~ 218 (457)
T cd07108 143 VAGNTVVLKAAEDAPLAVLLLAEILAQ----VLPAGVLNVITGYGEECGAALVDHPDVDKVTFTGSTEVGKIIYRAAADR 218 (457)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHH----hCCcCcEEEEeCCchHHHHHHhcCCCcCEEEEECcHHHHHHHHHHHhcc
Confidence 999999999999999999999999986 499999999996 5567888888999999999999999999998874
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhc-CCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 348 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAK-IDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 348 -~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~-f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
+|+++|||||||+||++|||+|.|++.+++|+ |.|+| +|++++|||||+++| |+|+++|+++++++++
T Consensus 219 l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~vg~p~~~~~ 297 (457)
T cd07108 219 LIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIY-DAFLEKLVAKLSKLKIGDPLDEAT 297 (457)
T ss_pred CCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHH-HHHHHHHHHHHhhCCCCCCCCCCC
Confidence 89999999999999999999999999999994 98877 999999999999999 6999999999876532
Q ss_pred ---------------------------eE-ecCccc------cccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 ---------------------------GL-FGGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 ---------------------------~~-~g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +||... .++| | | ++|.+++||+||||++|++|+|+|
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~ 377 (457)
T cd07108 298 DIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLAREEIFGPVLCAIPWKDED 377 (457)
T ss_pred CcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChhhhcCCCCceEEeecCCCHH
Confidence 11 233221 1333 5 2 358899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccc-hhcceEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVG-VEGLLTTR 533 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~g-l~~ft~~K 533 (560)
|||+++|+++|||++||||+|.+++++|++++++|+|+||++....+..||||.|.||+|. ++|.++ +++||+.|
T Consensus 378 eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~~~~~~~pfGG~k~SG~G~----~~g~~~~~~~f~~~k 453 (457)
T cd07108 378 EVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGGGQQPGQSYGGFKQSGLGR----EASLEGMLEHFTQKK 453 (457)
T ss_pred HHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCcCCcccCcCCC----CccchhHHHHhhceE
Confidence 9999999999999999999999999999999999999999987666678999999998863 457766 79999999
Q ss_pred EEEE
Q 008588 534 WILR 537 (560)
Q Consensus 534 ~v~~ 537 (560)
+|++
T Consensus 454 ~i~~ 457 (457)
T cd07108 454 TVNI 457 (457)
T ss_pred EEeC
Confidence 9863
No 69
>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17. Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.
Probab=100.00 E-value=3.3e-74 Score=630.82 Aligned_cols=400 Identities=18% Similarity=0.190 Sum_probs=330.8
Q ss_pred hhhhhh-cCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH-cHHHHHHHHHHHHHH
Q 008588 111 SIIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEA-NESLIKVENEADVAA 188 (560)
Q Consensus 111 ~i~~~~-~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~-~~~el~~~~~~~~~~ 188 (560)
.+.++. +|+.++++...+ .+||++++++|++||+.|+++|..+|.++|++++++|++ |+++|++++..|+++
T Consensus 49 ~v~~P~~tg~~l~~~~~~~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk 122 (522)
T cd07123 49 KQVMPHDHAHVLATYHYAD------AALVEKAIEAALEARKEWARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGK 122 (522)
T ss_pred EEECCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCC
Confidence 345677 488899888777 899999999999999999999999999999999999997 899999988766544
Q ss_pred HHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecce-EEEEEEcCC-Chh-hHHH
Q 008588 189 AQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQ 264 (560)
Q Consensus 189 ~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~ 264 (560)
+.. ++. ..++...++.++++++..+ ..+...+.. ..+...+++++|+ |||++|+|| ||. +..+
T Consensus 123 ~~~----~a~-------~~~v~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~P~~GVv~~I~PwNfP~~~~~~ 189 (522)
T cd07123 123 NVW----QAE-------IDAACELIDFLRFNVKYAEELYAQQPLSS--PAGVWNRLEYRPLEGFVYAVSPFNFTAIGGNL 189 (522)
T ss_pred CHH----HHh-------HHHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecCCceEEEECCcccHHHHHHH
Confidence 321 211 1245556666666654322 112211111 1133467889999 999999998 785 5678
Q ss_pred HHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHH
Q 008588 265 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQI 342 (560)
Q Consensus 265 ~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i 342 (560)
+++||| +||+||+|||++||+++..+++++.+ + ||+|+||+|+| ++++++.|..||+|++|+||||+++|+.|
T Consensus 190 ~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~----aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~V~FTGS~~~G~~i 264 (522)
T cd07123 190 AGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEE----AGLPPGVINFVPGDGPVVGDTVLASPHLAGLHFTGSTPTFKSL 264 (522)
T ss_pred HHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHH----cCcCCCcEEEEecCchHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 999999 69999999999999999999999987 7 99999999996 55688888899999999999999999999
Q ss_pred HHhcC---C------CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHH
Q 008588 343 KESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQ 412 (560)
Q Consensus 343 ~~~a~---~------~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~ 412 (560)
+++++ + |+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++
T Consensus 265 ~~~aa~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~ 343 (522)
T cd07123 265 WKQIGENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLW-PEVKERLLEELK 343 (522)
T ss_pred HHHHHhhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHh
Confidence 98773 4 899999999999999999999999999999999987 999999999999999 699999999988
Q ss_pred hcCC-----------------------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEE
Q 008588 413 HEGV-----------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 446 (560)
Q Consensus 413 ~~~~-----------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~ 446 (560)
++.+ ++ .|+... .++| | | ++|++++||+||||++
T Consensus 344 ~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~ 423 (522)
T cd07123 344 EIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTEEIFGPVLT 423 (522)
T ss_pred hCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEEEeCCCCCChhhhcCCCCCeEE
Confidence 7521 12 133221 2333 6 3 3689999999999999
Q ss_pred EEEeCC--HHHHHHHHHhcC-CCceeEEEecCHHHHHHHHhhc--CeeeEEEcCCcCcC--CCCccCCccceeccccCcc
Q 008588 447 VEIVDD--VRAAIDHIHQHG-SAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTRFC--DGARFGLGAEVGISTSRIH 519 (560)
Q Consensus 447 v~~~~~--~deAi~~aN~~~-~GL~a~I~t~d~~~a~~~~~~l--~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~ 519 (560)
|++|+| +||||+++|++. |||++||||+|.++++++++++ ++|+||||+..... +..||||.+.||+|+ +
T Consensus 424 V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~~~~~~~PfGG~k~SG~gg---~ 500 (522)
T cd07123 424 VYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTGAVVGQQPFGGARASGTND---K 500 (522)
T ss_pred EEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCCCCCCCCCCCcchhcCCCc---c
Confidence 999994 799999999995 9999999999999999999996 59999999875432 468999999999852 3
Q ss_pred cccccchhcceEEEEEEEc
Q 008588 520 ARGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 520 ~~G~~gl~~ft~~K~v~~~ 538 (560)
++|++++++||+.|++...
T Consensus 501 ~~g~~~l~~~~~~k~~~~~ 519 (522)
T cd07123 501 AGSPLNLLRWVSPRTIKET 519 (522)
T ss_pred cCCHHHHHHhcceEEEEEe
Confidence 5689999999999998764
No 70
>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like. Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.
Probab=100.00 E-value=2.2e-74 Score=619.77 Aligned_cols=380 Identities=20% Similarity=0.193 Sum_probs=313.4
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+.+++|++||+.|+++|..+|+++|++++++|++|.+||+++++.|+++.. .++.. .|+...++.++++
T Consensus 2 ~~v~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~ 70 (449)
T cd07136 2 SLVEKQRAFFKTGATKDVEFRIEQLKKLKQAIKKYENEILEALKKDLGKSE----FEAYM-------TEIGFVLSEINYA 70 (449)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH----HHHHH-------HHHHHHHHHHHHH
Confidence 568899999999999999999999999999999999999999887765442 22221 2445555555554
Q ss_pred hcccc-cccc-cccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 220 ADMEE-PIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 220 ~~~~~-~~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
++..+ ..+. ..+......+...+++|+|+|||++|+|| ||. +..++++|||++||+||+|||+.||+++..+++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~ 150 (449)
T cd07136 71 IKHLKKWMKPKRVKTPLLNFPSKSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150 (449)
T ss_pred HHHHHHHhCCCccCCccccCCceeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHH
Confidence 43221 1111 11100001133467889999999999998 796 56899999999999999999999999999999999
Q ss_pred HHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHH
Q 008588 296 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAK 372 (560)
Q Consensus 296 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa 372 (560)
++ ++|+|++|+|+++.+.+..|.+|+ ||+|+||||+++|+.|++++. ||+++|||||||+||++|||+|.|+
T Consensus 151 ~~----alP~gv~~~v~g~~~~~~~L~~~~-v~~V~fTGS~~~g~~i~~~aa~~~~~v~lElgGknp~iV~~dADld~aa 225 (449)
T cd07136 151 EE----TFDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVMEAAAKHLTPVTLELGGKSPCIVDEDANLKLAA 225 (449)
T ss_pred HH----hCCCCEEEEEeCChHHHHHHhcCC-CCEEEEECCHHHHHHHHHHHHhcCCCEEEEecCCCeEEECCCCCHHHHH
Confidence 87 499999999996444556566665 999999999999999998773 8999999999999999999999999
Q ss_pred HHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCe-----------------------------EecCc
Q 008588 373 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-----------------------------LFGGP 422 (560)
Q Consensus 373 ~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~-----------------------------~~g~~ 422 (560)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|++.++++... ++||.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~ 304 (449)
T cd07136 226 KRIVWGKFLNAGQTCVAPDYVLVHESVK-EKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGN 304 (449)
T ss_pred HHHHHHHHcccCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCC
Confidence 999999999987 999999999999999 69999999999876210 12433
Q ss_pred cc-cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEE
Q 008588 423 RA-SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 493 (560)
Q Consensus 423 ~~-~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~V 493 (560)
.. .++| | | ++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|..+++++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~v 384 (449)
T cd07136 305 TDRETLYIEPTILDNVTWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCI 384 (449)
T ss_pred cCCCCCEEeeEEEecCCCcChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEE
Confidence 21 1333 5 2 368999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEEEcCc
Q 008588 494 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 540 (560)
Q Consensus 494 N~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~ 540 (560)
|+.+.. .+..||||.+.||+|. ++|.+|+++||+.|+|+++..
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~v~~~~~ 429 (449)
T cd07136 385 NDTIMHLANPYLPFGGVGNSGMGS----YHGKYSFDTFSHKKSILKKST 429 (449)
T ss_pred CCccccccCCCCCccCcCcccCCc----ccCHHHHHHhccceEEEEcCC
Confidence 986543 3568999999999873 569999999999999988753
No 71
>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional
Probab=100.00 E-value=7.9e-74 Score=627.64 Aligned_cols=398 Identities=19% Similarity=0.223 Sum_probs=334.7
Q ss_pred hhhhhh-cCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 111 SIIKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 111 ~i~~~~-~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.+.++. +|+.++++..++ .+|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++++|.+++
T Consensus 53 ~~~~P~~t~~~i~~~~~a~------~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 126 (514)
T PRK03137 53 VSINPANKSEVVGRVSKAT------KELAEKAMQAALEAFETWKKWSPEDRARILLRAAAIIRRRKHEFSAWLVKEAGKP 126 (514)
T ss_pred EeECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHcCCC
Confidence 345677 588899988887 8999999999999999999999999999999999999999999999987766543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cc-cccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 265 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 265 (560)
. .++ ..|+...++.++++++..+ .. +..... ..+...+++++|+|||++|+|| ||. +..++
T Consensus 127 ~----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 191 (514)
T PRK03137 127 W----AEA--------DADTAEAIDFLEYYARQMLKLADGKPVES---RPGEHNRYFYIPLGVGVVISPWNFPFAIMAGM 191 (514)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEecCcEEEEECCCccHHHHHHHH
Confidence 2 122 1355666666666654321 11 111111 1233567889999999999998 796 56799
Q ss_pred HHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 266 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 266 ~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
+++||++||+||+|||+.||+++..+++++.+ + +|+|++|+|++ +.++++.|..||+|++|+||||+.+|+.|+
T Consensus 192 i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~ 267 (514)
T PRK03137 192 TLAAIVAGNTVLLKPASDTPVIAAKFVEVLEE----AGLPAGVVNFVPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIY 267 (514)
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----hCCCCCcEEEeecCchHHHHHHhcCCCcCEEEEECCcHHHHHHH
Confidence 99999999999999999999999999999987 6 99999999996 567888888999999999999999999999
Q ss_pred HhcC---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh
Q 008588 344 ESTK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 413 (560)
Q Consensus 344 ~~a~---------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~ 413 (560)
+.++ ||+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|+|||+++| |+|+++|++++++
T Consensus 268 ~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~l~~~~~~ 346 (514)
T PRK03137 268 ERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVY-DEVLEKVVELTKE 346 (514)
T ss_pred HHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHH-HHHHHHHHHHHHh
Confidence 8763 6999999999999999999999999999999999987 999999999999999 6999999999886
Q ss_pred cCC--------------------------------e-EecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEe
Q 008588 414 EGV--------------------------------G-LFGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIV 450 (560)
Q Consensus 414 ~~~--------------------------------~-~~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~ 450 (560)
+++ + ++|+... .++ + | | ++|++++||+||||++|++|
T Consensus 347 l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~ 426 (514)
T PRK03137 347 LTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFADVDPKARIMQEEIFGPVVAFIKA 426 (514)
T ss_pred CCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEeCCCCCCHHHhCCCCCceEEEEec
Confidence 632 1 1233221 233 3 5 2 36889999999999999999
Q ss_pred CCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhc
Q 008588 451 DDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEG 528 (560)
Q Consensus 451 ~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ 528 (560)
+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+..... +.+||||.|.||+|. +.+|.+|+++
T Consensus 427 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~l~~ 503 (514)
T PRK03137 427 KDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCTGAIVGYHPFGGFNMSGTDS---KAGGPDYLLL 503 (514)
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999865432 457999999998862 2458899999
Q ss_pred ceEEEEEEE
Q 008588 529 LLTTRWILR 537 (560)
Q Consensus 529 ft~~K~v~~ 537 (560)
||+.|+|+.
T Consensus 504 ft~~k~v~~ 512 (514)
T PRK03137 504 FLQAKTVSE 512 (514)
T ss_pred hceEEEEEE
Confidence 999999865
No 72
>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1. This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.
Probab=100.00 E-value=3e-74 Score=630.99 Aligned_cols=400 Identities=19% Similarity=0.196 Sum_probs=332.3
Q ss_pred hhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~el~~~~~~~~~~~ 189 (560)
+.++.+ |+.++++...+ .+|+++|+++|++||+.|+++|..+|.++|++++++|+ ++.++|+++++.|+++.
T Consensus 50 ~~nP~t~g~~i~~~~~~~------~~~v~~av~~A~~a~~~W~~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~ 123 (533)
T TIGR01236 50 QVQPHNHQAVLAKATNAT------EEDAAKAVEAALDAKKDWSALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKN 123 (533)
T ss_pred EECCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCc
Confidence 456775 78888888787 89999999999999999999999999999999999999 59999999887666544
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecce-EEEEEEcCC-Chh-hHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD-ALVQI 265 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~-~~~~~ 265 (560)
. .++. .+++...++.+++++...+ ..+...+.. ..+...++.|+|+ |||++|+|| ||. +..++
T Consensus 124 ~----~~a~-------~e~v~~~i~~~~~~a~~a~~~~~~~~~~~--~~~~~~~~~~~P~~GVv~~I~PwN~P~~~~~~~ 190 (533)
T TIGR01236 124 V----YQAE-------IDAVAELIDFFRFNVKYARELYEQQPSES--APGEWNRTDYRPLEGFVYAISPFNFTAIAGNLP 190 (533)
T ss_pred H----HHHh-------HhHHHHHHHHHHHHHHHHHHhcCccccCC--CCCceeEEEEecCCCEEEEEeCCchHHHHHHHH
Confidence 2 1221 1236666777777664332 222221100 1233467889999 999999998 685 45789
Q ss_pred HHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 266 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 266 ~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
+++|| +||+||+|||++||+++.++++++.+ + ||+|+||+|+| +.++++.|..||+|++|+||||+++|+.|+
T Consensus 191 ~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~----aGlP~gvv~vv~g~~~~~g~~Lv~~p~v~~V~FTGS~~~G~~i~ 265 (533)
T TIGR01236 191 GAPAL-MGNTVIWKPSITATLSNYLTMRILEE----AGLPPGVINFVPGDGFAVSDVVLADPRLAGIHFTGSTATFKHLW 265 (533)
T ss_pred HHHHH-hCCeEEEECCCcCCHHHHHHHHHHHh----cCCCCCcEEEEecCcHHHHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999 89999999999999999999999987 7 99999999996 567888888999999999999999999999
Q ss_pred HhcC---C------CEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh
Q 008588 344 ESTK---I------PVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 413 (560)
Q Consensus 344 ~~a~---~------~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~ 413 (560)
++++ + ++++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|+|||++|| |+|+++|++++++
T Consensus 266 ~~aa~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~ 344 (533)
T TIGR01236 266 KWVASNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRLYVPHSVW-PRFKDELLAELAE 344 (533)
T ss_pred HHHHhhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeEEEchhHH-HHHHHHHHHHHhc
Confidence 8763 4 499999999999999999999999999999999987 999999999999999 6999999999887
Q ss_pred cCC------------------------------------eE-ecCccc--cccc--c-C-----CCCCcccccccCceEE
Q 008588 414 EGV------------------------------------GL-FGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCT 446 (560)
Q Consensus 414 ~~~------------------------------------~~-~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~ 446 (560)
+++ ++ +|+... .++| | | ++|++++||+||||++
T Consensus 345 l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl~~~~~d~~i~~eE~FGPVl~ 424 (533)
T TIGR01236 345 VKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVILSKDPTDPLMVEEIFGPVLT 424 (533)
T ss_pred CCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcccCCCCeEE
Confidence 521 12 233221 2333 6 2 3689999999999999
Q ss_pred EEEeCC--HHHHHHHH-HhcCCCceeEEEecCHHHHHHHHhhcC--eeeEEEcCCcCcC--CCCccCCccceeccccCcc
Q 008588 447 VEIVDD--VRAAIDHI-HQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTRFC--DGARFGLGAEVGISTSRIH 519 (560)
Q Consensus 447 v~~~~~--~deAi~~a-N~~~~GL~a~I~t~d~~~a~~~~~~l~--~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~ 519 (560)
|++|+| +||||+++ |+++|||++||||+|.+++.+++++++ +|+||||+..... +..||||.|.||+|. +
T Consensus 425 v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~ 501 (533)
T TIGR01236 425 VYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTGAVVGQQPFGGARGSGTND---K 501 (533)
T ss_pred EEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCCCCCCCCCCCCcccccCCc---c
Confidence 999999 59999999 899999999999999999999999977 9999999765433 467999999998862 3
Q ss_pred cccccchhcceEEEEEEEcC
Q 008588 520 ARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 520 ~~G~~gl~~ft~~K~v~~~~ 539 (560)
++|.+|+++|++.|++....
T Consensus 502 ~~g~~~l~~f~~~k~v~~~~ 521 (533)
T TIGR01236 502 AGGPLNLLRWTSARSIKETF 521 (533)
T ss_pred cCCHHHHHHhcceEEEEEEc
Confidence 56899999999999987644
No 73
>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like. Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.
Probab=100.00 E-value=2.8e-74 Score=619.22 Aligned_cols=374 Identities=17% Similarity=0.204 Sum_probs=317.2
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHH
Q 008588 138 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 217 (560)
Q Consensus 138 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~ 217 (560)
|++++++|++||+.|+++|.++|.++|++++++|+++.++|++++++|++++.. ++ ..|+...++.++
T Consensus 1 v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a--------~~ev~~~~~~~~ 68 (429)
T cd07100 1 IEAALDRAHAAFLAWRKTSFAERAALLRKLADLLRERKDELARLITLEMGKPIA----EA--------RAEVEKCAWICR 68 (429)
T ss_pred CHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999998877654421 22 235666666666
Q ss_pred HHhccccc-cc-ccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHH
Q 008588 218 ILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 293 (560)
Q Consensus 218 ~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~ 293 (560)
+++...+. .+ ...+. .+...+++++|+|||++|+|| ||+ +.+++++|||++||+||+|||+.+|+++..|.+
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GvV~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~ 144 (429)
T cd07100 69 YYAENAEAFLADEPIET----DAGKAYVRYEPLGVVLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEE 144 (429)
T ss_pred HHHHHHHHhcCCeeccC----CCceEEEEEEeeeEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHH
Confidence 66543221 11 11111 123457889999999999998 796 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHH
Q 008588 294 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLD 369 (560)
Q Consensus 294 l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld 369 (560)
++.+ + +|+|++|+|+++.+.+..|..||+|++|+||||+++|+.|++++. ||+++|||||||+||++|||+|
T Consensus 145 ~l~~----aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~fTGs~~~g~~i~~~aa~~~~~~~lelgG~~p~iV~~daDl~ 220 (429)
T cd07100 145 LFRE----AGFPEGVFQNLLIDSDQVEAIIADPRVRGVTLTGSERAGRAVAAEAGKNLKKSVLELGGSDPFIVLDDADLD 220 (429)
T ss_pred HHHH----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhcCcceEEecCCCCeeEECCCCCHH
Confidence 9987 6 999999999963345566778999999999999999999998873 8999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------------------------------
Q 008588 370 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 416 (560)
Q Consensus 370 ~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------------------------------- 416 (560)
.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|+++++++.+
T Consensus 221 ~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ 299 (429)
T cd07100 221 KAVKTAVKGRLQNAGQSCIAAKRFIVHEDVY-DEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAA 299 (429)
T ss_pred HHHHHHHHHHHhccCCCCCCCeEEEEcHHHH-HHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHC
Confidence 999999999999987 999999999999999 6999999999887532
Q ss_pred --eE-ecCcccc--cc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 008588 417 --GL-FGGPRAS--KL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 483 (560)
Q Consensus 417 --~~-~g~~~~~--~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~ 483 (560)
++ +|+.+.. ++ + | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++
T Consensus 300 Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~ 379 (429)
T cd07100 300 GATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVA 379 (429)
T ss_pred CCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2443221 33 3 5 2 36889999999999999999999999999999999999999999999999999
Q ss_pred hhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 484 CQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 484 ~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++++|.|+||++....+.+||||.+.||+|. ++|++|+++||+.|+|+
T Consensus 380 ~~l~~g~v~iN~~~~~~~~~pfGG~~~SG~G~----~~g~~~l~~~~~~k~v~ 428 (429)
T cd07100 380 RRLEAGMVFINGMVKSDPRLPFGGVKRSGYGR----ELGRFGIREFVNIKTVW 428 (429)
T ss_pred HhCCcCeEEECCCCCCCCCCCcCCccccccCC----cchHHHHHHhcceeEEe
Confidence 99999999999987666678999999998763 56999999999999985
No 74
>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like. The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.
Probab=100.00 E-value=3.9e-74 Score=624.53 Aligned_cols=392 Identities=20% Similarity=0.200 Sum_probs=330.4
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
..++.+|+.++++...+ ++|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 18 ~~~P~~~~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 91 (466)
T cd07138 18 VINPATEEVIGTVPLGT------AADVDRAVAAARRAFPAWSATSVEERAALLERIAEAYEARADELAQAITLEMGAPIT 91 (466)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 34567889999987777 899999999999999999999999999999999999999999999998766654421
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
++. ..++...++.++++++..+...... . ....+++++|+|||++|+|| ||. +++++++||
T Consensus 92 ----~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~A 154 (466)
T cd07138 92 ----LAR-------AAQVGLGIGHLRAAADALKDFEFEE-----R-RGNSLVVREPIGVCGLITPWNWPLNQIVLKVAPA 154 (466)
T ss_pred ----HHH-------HHHHHHHHHHHHHHHHhhhhccccc-----c-CceEEEEEeecceEEEECCCccHHHHHHHHHHHH
Confidence 111 1244455555555554322111100 0 11346789999999999998 795 678999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK 347 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~ 347 (560)
|++||+||+|||+.||+|+.++++++.+ + +|+|+||+|++ ++++++.|..||+|++|+||||+++|+.|++.+.
T Consensus 155 LaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~fTGs~~~g~~i~~~aa 230 (466)
T cd07138 155 LAAGCTVVLKPSEVAPLSAIILAEILDE----AGLPAGVFNLVNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAEAAA 230 (466)
T ss_pred HhcCCEEEEECCCcCcHHHHHHHHHHHH----cCCCCCcEEEEeCCchhHHHHHhcCCCCCEEEEECcHHHHHHHHHHHh
Confidence 9999999999999999999999999987 7 99999999996 6668888889999999999999999999998874
Q ss_pred ---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 348 ---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 348 ---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|++++|||||+++| |+|+++|+++++++++
T Consensus 231 ~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~ 309 (466)
T cd07138 231 DTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRY-AEAEEIAAAAAEAYVVGDPRDPA 309 (466)
T ss_pred ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhcCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 6999999998876521
Q ss_pred ---------------------------eE-ecCc-cc----cccc--c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 ---------------------------GL-FGGP-RA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 ---------------------------~~-~g~~-~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +|+. .. .++| | | +++++++||+||||++|++|+|+||
T Consensus 310 ~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~fgPvl~v~~~~~~~e 389 (466)
T cd07138 310 TTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREEIFGPVLSIIPYDDEDE 389 (466)
T ss_pred CcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCCCCCceEEEeccCCHHH
Confidence 22 2332 11 2333 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
||+++|+++|||+++|||+|.++++++++++++|+|+||+.. ..+.+||||.+.||+|. ++|.+|+++||+.|+|
T Consensus 390 ai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~----~~g~~~~~~~~~~k~v 464 (466)
T cd07138 390 AIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA-FNPGAPFGGYKQSGNGR----EWGRYGLEEFLEVKSI 464 (466)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC-CCCCCCcCCcccccCCc----cchHHHHHHhcceeEE
Confidence 999999999999999999999999999999999999999864 45678999999998763 5699999999999997
Q ss_pred E
Q 008588 536 L 536 (560)
Q Consensus 536 ~ 536 (560)
+
T Consensus 465 ~ 465 (466)
T cd07138 465 Q 465 (466)
T ss_pred e
Confidence 5
No 75
>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional
Probab=100.00 E-value=3.1e-74 Score=627.58 Aligned_cols=398 Identities=18% Similarity=0.177 Sum_probs=336.9
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
..++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|.++|++++++|++++
T Consensus 39 ~~nP~tg~~i~~v~~~~------~~dv~~av~aA~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 112 (494)
T PRK09847 39 TVDPVTQAPLAKIARGK------SVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELALLETLDTGKP 112 (494)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 34677899999988777 8999999999999997 699999999999999999999999999999887666543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
. .++. ..|+..+++.++++++..+ ..++..+. ..+...+++|+|+|||++|+|| ||. ++++++
T Consensus 113 ~----~~~~-------~~ev~~~~~~l~~~a~~~~~~~g~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 178 (494)
T PRK09847 113 I----RHSL-------RDDIPGAARAIRWYAEAIDKVYGEVATT---SSHELAMIVREPVGVIAAIVPWNFPLLLTCWKL 178 (494)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCccccC---CCCceeEEEecceeEEEEECCCccHHHHHHHHH
Confidence 2 1111 1356667777777665432 22332221 1233457889999999999998 796 568999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHH
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKE 344 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~ 344 (560)
+|||++||+||+|||+.||.++..+++++.+ + +|+|+||+|++ +.++++.|..||++|+|+||||+.+|+.|++
T Consensus 179 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~fTGs~~~g~~v~~ 254 (494)
T PRK09847 179 GPALAAGNSVILKPSEKSPLSAIRLAGLAKE----AGLPDGVLNVVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLK 254 (494)
T ss_pred HHHHHcCCEEEEeCCCCChHHHHHHHHHHHH----cCcCcCcEEEEeCCChhHHHHHhcCCCCCEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999887 7 99999999996 6667787888999999999999999999988
Q ss_pred hcC----CCEEEecCccceEEEcCCC-CHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--
Q 008588 345 STK----IPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 416 (560)
Q Consensus 345 ~a~----~~~~lElGGk~p~iV~~dA-Dld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 416 (560)
.+. +|++||||||||+||++|+ |+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++.+
T Consensus 255 ~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~ 333 (494)
T PRK09847 255 DAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIA-DEFLALLKQQAQNWQPGH 333 (494)
T ss_pred HhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCC
Confidence 652 8999999999999999997 999999999999999987 999999999999999 6999999999987621
Q ss_pred -------------------------------eE-ecCccc--cccc-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 -------------------------------GL-FGGPRA--SKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 -------------------------------~~-~g~~~~--~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +|+... ..++ | | +++++++||+||||++|++|+|+||
T Consensus 334 p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~e 413 (494)
T PRK09847 334 PLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAAIGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQ 413 (494)
T ss_pred CCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCceEeeEEEeCCCCCChHHhCcCcCceEEEEecCCHHH
Confidence 11 233221 1233 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
||+++|+++|||++||||+|.+++.++++++++|+|+||+.+......||||.|.||+|. ++|.+|+++||+.|+|
T Consensus 414 ai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~ft~~k~v 489 (494)
T PRK09847 414 ALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGR----DKSLHALEKFTELKTI 489 (494)
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCcccccCc----cchHHHHHHhhceEEE
Confidence 999999999999999999999999999999999999999977666678999999999763 5799999999999999
Q ss_pred EEc
Q 008588 536 LRG 538 (560)
Q Consensus 536 ~~~ 538 (560)
++.
T Consensus 490 ~~~ 492 (494)
T PRK09847 490 WIS 492 (494)
T ss_pred EEe
Confidence 764
No 76
>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed
Probab=100.00 E-value=6.8e-74 Score=629.06 Aligned_cols=398 Identities=17% Similarity=0.175 Sum_probs=331.4
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 38 nP~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 109 (524)
T PRK09407 38 APFTGEPLATVPVST------AADVEAAFARARAAQRAWAATPVRERAAVLLRFHDLVLENREELLDLVQLETGKARR-- 109 (524)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH--
Confidence 456889999988888 899999999999999999999999999999999999999999999999887765432
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
++. .|+...+..+++++...+ ..+..............+.+|+|+|||++|+|| ||. +.+++++|||
T Consensus 110 --~a~--------~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~P~N~Pl~~~~~~~~~AL 179 (524)
T PRK09407 110 --HAF--------EEVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPKGVVGVISPWNYPLTLAVSDAIPAL 179 (524)
T ss_pred --HHH--------HHHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecceEEEEEeCCCChHHHHHHHHHHHH
Confidence 221 244445555555443221 111111000001123467889999999999997 795 5789999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~- 347 (560)
++||+||+|||+.||+++..+++++.+ + +|+|+||+|++ +.++++.|..| +|+|+||||+++|+.|+++++
T Consensus 180 aaGN~VIlKPs~~tp~~~~~l~~ll~e----aGlP~gvv~~v~g~~~~~~~~L~~~--~d~V~fTGs~~~g~~v~~~aa~ 253 (524)
T PRK09407 180 LAGNAVVLKPDSQTPLTALAAVELLYE----AGLPRDLWQVVTGPGPVVGTALVDN--ADYLMFTGSTATGRVLAEQAGR 253 (524)
T ss_pred HcCCEEEEECCCCCHHHHHHHHHHHHH----cCCCcccEEEEecCCchHHHHHHhc--CCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 7 99999999996 56677777765 899999999999999998874
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 348 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 348 --~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
+|+++|||||||+||++|||++.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 254 ~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~l~~G~~~~~~~ 332 (524)
T PRK09407 254 RLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIY-DEFVRAFVAAVRAMRLGAGYDYSA 332 (524)
T ss_pred cCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCcCC
Confidence 8999999999999999999999999999999999977 999999999999999 6999999999887632
Q ss_pred --------------------------eE-ecCccc---cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHH
Q 008588 417 --------------------------GL-FGGPRA---SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAID 458 (560)
Q Consensus 417 --------------------------~~-~g~~~~---~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~ 458 (560)
++ +||... .++| | | ++|.+++||+||||++|++|+|+||||+
T Consensus 333 ~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~deai~ 412 (524)
T PRK09407 333 DMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVE 412 (524)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhCCCCCCeEEEEeeCCHHHHHH
Confidence 12 244321 1233 6 3 3589999999999999999999999999
Q ss_pred HHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcC---cCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 459 HIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR---FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 459 ~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~---~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
++|+++|||++||||+|.++++++++++++|.|+||++.. .....||||.|.||+|. ++|.+|+++||+.|+|
T Consensus 413 ~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~ft~~k~v 488 (524)
T PRK09407 413 RANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYAAAWGSVDAPMGGMKDSGLGR----RHGAEGLLKYTESQTI 488 (524)
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCcCcCCCCCCCCCccccccCc----cchHHHHHHhCCeEEE
Confidence 9999999999999999999999999999999999998654 23457999999999873 5699999999999999
Q ss_pred EEcCc
Q 008588 536 LRGNG 540 (560)
Q Consensus 536 ~~~~~ 540 (560)
+++..
T Consensus 489 ~~~~~ 493 (524)
T PRK09407 489 ATQRV 493 (524)
T ss_pred EEccc
Confidence 88653
No 77
>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.
Probab=100.00 E-value=8.7e-74 Score=620.17 Aligned_cols=394 Identities=20% Similarity=0.224 Sum_probs=330.2
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|++++..+|.++|++++++|+++.++|+++++.|.+++..
T Consensus 2 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 73 (452)
T cd07102 2 SPIDGSVIAERPLAS------LEAVRAALERARAAQKGWRAVPLEERKAIVTRAVELLAANTDEIAEELTWQMGRPIA-- 73 (452)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHH--
Confidence 356788889887777 889999999999999999999999999999999999999999999988766654421
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
++ ..|+...++.+++++...+ ..+..... ...+...+.+++|+|||++|+|| ||. +.+++++|||
T Consensus 74 --~~--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~l~~AL 141 (452)
T cd07102 74 --QA--------GGEIRGMLERARYMISIAEEALADIRVP--EKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPAL 141 (452)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCCcccC--CCCCeeEEEEEEeccEEEEEcCCchHHHHHHHHHHHHH
Confidence 21 1234444444444432211 11111110 11344567889999999999997 796 5689999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-- 347 (560)
++||+||+|||+.+|+++..+.+++++ + +|+|++|+|++..+.+..|..||+||+|+||||+.+|+.|+++++
T Consensus 142 aaGN~VVlKps~~~~~~~~~l~~~l~~----aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 217 (452)
T cd07102 142 LAGNAVILKHSPQTPLCGERFAAAFAE----AGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAGGRAIQRAAAGR 217 (452)
T ss_pred HcCCEEEEECCCCCcHHHHHHHHHHHh----cCCCcCcEEEEeCCchhHHHHhcCCCCCEEEEECcHHHHHHHHHHHHhc
Confidence 999999999999999999999999986 7 999999999964467777888999999999999999999998774
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---------
Q 008588 348 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 416 (560)
Q Consensus 348 -~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------- 416 (560)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 218 ~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~L~~~~~~l~vg~p~~~~~~ 296 (452)
T cd07102 218 FIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIY-DAFVEAFVAVVKGYKLGDPLDPSTT 296 (452)
T ss_pred CCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHH-HHHHHHHHHHHHhccCCCCCCCCCC
Confidence 8999999999999999999999999999999999987 999999999999999 6999999999876532
Q ss_pred -------------------------eE-ecCcc-----ccc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 417 -------------------------GL-FGGPR-----ASK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 417 -------------------------~~-~g~~~-----~~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
++ +|+.+ ..+ ++ | | ++|++++||+||||++|++|+|+||||
T Consensus 297 ~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPvl~v~~~~~~~eai 376 (452)
T cd07102 297 LGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAI 376 (452)
T ss_pred CCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcCCcCCeEEEEEeCCHHHHH
Confidence 12 24432 123 33 5 2 367899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++|+++|||+++|||+|..+++++++++++|+|+||++.......||||.|+||+|. ++|.+|+++||+.|+++
T Consensus 377 ~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~~~~~k~~~ 451 (452)
T cd07102 377 ALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCDYLDPALAWTGVKDSGRGV----TLSRLGYDQLTRPKSYH 451 (452)
T ss_pred HHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCCCCCCCCCCCCccccccCc----cchHHHHHHHhceeEEe
Confidence 9999999999999999999999999999999999999987666678999999999863 56999999999999985
No 78
>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like. ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.
Probab=100.00 E-value=1.3e-73 Score=624.32 Aligned_cols=399 Identities=16% Similarity=0.186 Sum_probs=333.2
Q ss_pred hhhh-cCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVL-EGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~-~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++. +|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|++++.
T Consensus 37 ~~P~~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 109 (500)
T cd07083 37 VSPFAPSEVVGTTAKAD------KAEAEAALEAAWAAFKTWKDWPQEDRARLLLKAADLLRRRRRELIATLTYEVGKNW- 109 (500)
T ss_pred eCCCCCCcEEEEEcCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCH-
Confidence 4555 588888887777 89999999999999999999999999999999999999999999999877765432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+...++.++++++... ..+...... ...+...+++++|+|||++|+|| ||. +.++++++
T Consensus 110 ---~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ 177 (500)
T cd07083 110 ---VEA--------IDDVAEAIDFIRYYARAALRLRYPAVEVV-PYPGEDNESFYVGLGAGVVISPWNFPVAIFTGMIVA 177 (500)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC-CCCCceEEEEEeccceEEEEcCCccHHHHHHHHHHH
Confidence 121 2356666666666654322 112111000 01233457789999999999998 795 56799999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.||+|+.++++++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|++.+
T Consensus 178 ALaaGN~VVlKPs~~tp~~~~~l~~~~~e----aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~ftGs~~~g~~v~~~a 253 (500)
T cd07083 178 PVAVGNTVIAKPAEDAVVVGYKVFEIFHE----AGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGSLETGKKIYEAA 253 (500)
T ss_pred HHHcCCeEEEeCCCcchHHHHHHHHHHHH----cCCCCCceEEEeCCCchhHHHHhcCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 667888888999999999999999999998776
Q ss_pred C---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC
Q 008588 347 K---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 416 (560)
Q Consensus 347 ~---------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~ 416 (560)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++.+
T Consensus 254 a~~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~ 332 (500)
T cd07083 254 ARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGAY-EPVLERLLKRAERLSV 332 (500)
T ss_pred hhccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHcCCC
Confidence 2 8999999999999999999999999999999999887 999999999999999 6999999999886532
Q ss_pred ---------------------------------e-EecCccc--cccc--c-C-----CCCCcccccccCceEEEEEeC-
Q 008588 417 ---------------------------------G-LFGGPRA--SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD- 451 (560)
Q Consensus 417 ---------------------------------~-~~g~~~~--~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~- 451 (560)
+ ++|+... .++| | | ++|.+++||+||||++|++|+
T Consensus 333 G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~d 412 (500)
T cd07083 333 GPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKD 412 (500)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeCCCCCChHhhCCCCCceEEEEEeCC
Confidence 1 1233221 1333 6 2 358899999999999999999
Q ss_pred -CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhc
Q 008588 452 -DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEG 528 (560)
Q Consensus 452 -~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ 528 (560)
|+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.+... +..||||.|.||+|. +.+|++|+++
T Consensus 413 ~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~---~~~g~~~l~~ 489 (500)
T cd07083 413 DDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITGALVGVQPFGGFKLSGTNA---KTGGPHYLRR 489 (500)
T ss_pred CCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCCccccccCCC---cccCHHHHHH
Confidence 9999999999999999999999999999999999999999999875443 457999999998862 2458999999
Q ss_pred ceEEEEEEEc
Q 008588 529 LLTTRWILRG 538 (560)
Q Consensus 529 ft~~K~v~~~ 538 (560)
||+.|+++..
T Consensus 490 ~~~~k~~~~~ 499 (500)
T cd07083 490 FLEMKAVAER 499 (500)
T ss_pred hhheeEEEEc
Confidence 9999998753
No 79
>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.
Probab=100.00 E-value=1.3e-73 Score=621.59 Aligned_cols=400 Identities=15% Similarity=0.132 Sum_probs=335.4
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|+++.++|++++..|.+++.
T Consensus 19 ~~~~P~t~~~i~~~~~~~------~~~v~~ai~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 92 (477)
T TIGR01722 19 PVTNPATNEVTTKVAFAS------VDEVDAAVASARETFLTWGQTSLAQRTSVLLRYQALLKEHRDEIAELITAEHGKTH 92 (477)
T ss_pred eeeCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 345677899999988787 89999999999999999999999999999999999999999999998876655432
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
.++ ..|+...++.+++++...+ ..+...+. ...+...+.+|+|+|||++|+|| ||. +.+++++
T Consensus 93 ----~~a--------~~ev~~~i~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~ 158 (477)
T TIGR01722 93 ----SDA--------LGDVARGLEVVEHACGVNSLLKGETSTQ--VATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMFP 158 (477)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEcccceEEEEccCChHHHHHHHHHH
Confidence 222 2466667777776654332 12222211 01233457789999999999998 796 4579999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
+||++||+||+|||+++|+++..+++++++ + +|+|++|+|+++.+.++.|..||+|++|+||||+++|+.|++.+
T Consensus 159 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~ftGS~~~g~~v~~~a 234 (477)
T TIGR01722 159 IAIACGNTFVLKPSEKVPSAAVKLAELFSE----AGAPDGVLNVVHGDKEAVDRLLEHPDVKAVSFVGSTPIGRYIHTTG 234 (477)
T ss_pred HHHhcCCEEEeeCcccChHHHHHHHHHHHH----hCcCCCeEEEEeCCHHHHHHHHcCCCcCEEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996545667777899999999999999999998876
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC-------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------- 415 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~------- 415 (560)
. ||+++|||||||+||++|||+|.|++.+++++|.|+| .|++++|+|||+++ | +|+++|+++++++.
T Consensus 235 ~~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~-~f~~~l~~~~~~~~~G~~~~~ 312 (477)
T TIGR01722 235 SAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-D-EWVPEIRERAEKIRIGPGDDP 312 (477)
T ss_pred HhcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-H-HHHHHHHHHHhcCCCCCCCCC
Confidence 3 8999999999999999999999999999999999987 99999999999998 6 99999999987652
Q ss_pred ---------------------------CeEe-cCccc------cccc--c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 416 ---------------------------VGLF-GGPRA------SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 416 ---------------------------~~~~-g~~~~------~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
++++ |+... .++| | | ++|.+++||+||||++|++|+|+
T Consensus 313 ~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~V~~~~~~ 392 (477)
T TIGR01722 313 GAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTL 392 (477)
T ss_pred CCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhCCCCCCeEEEEEeCCH
Confidence 2222 33221 1333 6 3 35889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
||||+++|+++|||++||||+|.+++++|++++++|.||||++.... +.+||||.|.||+|. .+++|++|+++||+.
T Consensus 393 ~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~k~SG~G~--~~~~g~~~l~~~~~~ 470 (477)
T TIGR01722 393 EEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPIPVPLPYFSFTGWKDSFFGD--HHIYGKQGTHFYTRG 470 (477)
T ss_pred HHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCccccccCCC--CccChHHHHHHhcCe
Confidence 99999999999999999999999999999999999999999865443 567999999999862 235689999999999
Q ss_pred EEEEEc
Q 008588 533 RWILRG 538 (560)
Q Consensus 533 K~v~~~ 538 (560)
|++++.
T Consensus 471 k~i~~~ 476 (477)
T TIGR01722 471 KTVTTR 476 (477)
T ss_pred eEEEEe
Confidence 999875
No 80
>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA. The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.
Probab=100.00 E-value=2.2e-73 Score=624.60 Aligned_cols=401 Identities=19% Similarity=0.199 Sum_probs=336.5
Q ss_pred hhhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 111 ~i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.+.++.+ |+.++++...+ .+|+++++++|++||+.|+.++.++|.++|++++++|++|.++|++++++|++++
T Consensus 49 ~v~~P~t~g~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 122 (518)
T cd07125 49 PVIDPADHERTIGEVSLAD------AEDVDAALAIAAAAFAGWSATPVEERAEILEKAADLLEANRGELIALAAAEAGKT 122 (518)
T ss_pred EEECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCC
Confidence 3456788 89999988887 8999999999999999999999999999999999999999999999988776554
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccc-ccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQI-LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQI 265 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~ 265 (560)
.. ++. .|+..+++.++++++..+ ..+.. .+. ..+...+.+++|+|||++|+|| ||. +.+++
T Consensus 123 ~~----~a~--------~ev~~~i~~l~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~P~GVV~~I~p~N~P~~~~~~~ 187 (518)
T cd07125 123 LA----DAD--------AEVREAIDFCRYYAAQARELFSDPELPG---PTGELNGLELHGRGVFVCISPWNFPLAIFTGQ 187 (518)
T ss_pred HH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceeEEEEecccEEEEECCcchHHHHHHHH
Confidence 32 221 245555555555543221 11111 111 1233457889999999999998 796 56899
Q ss_pred HHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHH
Q 008588 266 ASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIK 343 (560)
Q Consensus 266 ~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~ 343 (560)
+++||++||+||+|||+.||+++.++++++.+ + +|+|+||+|++ ++++++.|..||+||+|+||||+++|++|+
T Consensus 188 i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~e----aGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~ftGs~~~g~~i~ 263 (518)
T cd07125 188 IAAALAAGNTVIAKPAEQTPLIAARAVELLHE----AGVPRDVLQLVPGDGEEIGEALVAHPRIDGVIFTGSTETAKLIN 263 (518)
T ss_pred HHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHH----cCCCCCcEEEEecCchhhHHHHhcCCCcCEEEEECCHHHHHHHH
Confidence 99999999999999999999999999999987 7 99999999996 555788888999999999999999999998
Q ss_pred Hhc------CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC
Q 008588 344 EST------KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV 416 (560)
Q Consensus 344 ~~a------~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~ 416 (560)
+++ .+|+++|||||||+||++|||+|.|++.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++++
T Consensus 264 ~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~ 342 (518)
T cd07125 264 RALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIA-ERFIEMLKGAMASLKV 342 (518)
T ss_pred HHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhH-HHHHHHHHHHHhcCCc
Confidence 865 37999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred e----------------------------------EecCccc--ccc-c-c-C---CCCCcccccccCceEEEEEeC--C
Q 008588 417 G----------------------------------LFGGPRA--SKL-L-Q-I---PETRLFHHEYNSMVCTVEIVD--D 452 (560)
Q Consensus 417 ~----------------------------------~~g~~~~--~~~-~-p-v---~~~~~~~eE~FGPVl~v~~~~--~ 452 (560)
. ++|+... .++ + | | .+|.+++||+||||++|++|+ |
T Consensus 343 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~Ptvl~~v~~~i~~eE~FgPVl~v~~~~~~~ 422 (518)
T cd07125 343 GDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVAPGIIEIVGIFDLTTEVFGPILHVIRFKAED 422 (518)
T ss_pred cCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEEEeecCChHhhCcccCCeEEEEEeCCCC
Confidence 1 1122211 133 3 5 3 268999999999999999999 9
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhcce
Q 008588 453 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLL 530 (560)
Q Consensus 453 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft 530 (560)
+||||+++|+++|||++||||+|.+++++|++++++|.|+||+++... +..||||.+.||+|. +.+|++|+++||
T Consensus 423 ~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~~~~~~~~PfGG~~~SG~G~---~~gg~~~~~~ft 499 (518)
T cd07125 423 LDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNITGAIVGRQPFGGWGLSGTGP---KAGGPNYLLRFG 499 (518)
T ss_pred HHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCCCCCcccccCCc---ccccHHHHHHhc
Confidence 999999999999999999999999999999999999999999876532 457999999999862 235799999999
Q ss_pred EEEEEEEcCc
Q 008588 531 TTRWILRGNG 540 (560)
Q Consensus 531 ~~K~v~~~~~ 540 (560)
+.|+|++++.
T Consensus 500 ~~k~i~~~~~ 509 (518)
T cd07125 500 NEKTVSLNTT 509 (518)
T ss_pred ceEEEEEEcc
Confidence 9999988654
No 81
>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase. Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.
Probab=100.00 E-value=2.2e-73 Score=620.58 Aligned_cols=397 Identities=16% Similarity=0.103 Sum_probs=329.0
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.+++..
T Consensus 17 ~~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 90 (484)
T TIGR03240 17 STNPATQEVLWQGAAAS------AAQVEAAVAAARAAFPAWARLSLEERIAVVQRFAALLEERKEALARVIARETGKPLW 90 (484)
T ss_pred eECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH
Confidence 35677899999988777 899999999999999999999999999999999999999999999998766554321
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
++ ..|+..+++.+++++... +..+..... . .+...+++++|+|||++|+|| ||. +..+++++
T Consensus 91 ----~a--------~~ev~~~~~~~~~~~~~~~~~~g~~~~~--~-~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~i~~ 155 (484)
T TIGR03240 91 ----ET--------RTEVASMIGKVAISIKAYHERTGESENP--M-PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVP 155 (484)
T ss_pred ----HH--------HHHHHHHHHHHHHHHHHHHHhcCccccC--C-CCceeEEEEecccEEEEECCCchHHHHHHHHHHH
Confidence 11 135556666665543221 112222111 1 122457889999999999998 796 56799999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc-
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST- 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a- 346 (560)
||++||+||+|||+.||+|+..+++++++ + +|+|+||+|+++.++++.|..||+||+|+||||+++|+.|++.+
T Consensus 156 ALaaGN~VVlKPs~~tp~t~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~fTGS~~~G~~i~~~aa 231 (484)
T TIGR03240 156 ALLAGNTVVFKPSELTPWVAEETVKLWEK----AGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFA 231 (484)
T ss_pred HHHcCCEEEEECCccccHHHHHHHHHHHH----hCcCcccEEEEeCCHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999987 6 99999999997656788888999999999999999999999875
Q ss_pred ---CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCcc-CCcchHHHHHHHHHhcCC-----
Q 008588 347 ---KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL-ACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 347 ---~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i-~dd~f~~~l~~~~~~~~~----- 416 (560)
.+|++||||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++ || +|+++|+++++++++
T Consensus 232 ~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d-~f~~~l~~~~~~~~~g~~~~ 310 (484)
T TIGR03240 232 GRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGD-AFLARLVEVAERLTVGAWDA 310 (484)
T ss_pred hcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHH-HHHHHHHHHHHhcccCCCCc
Confidence 26799999999999999999999999999999999987 99999999999998 65 999999998876521
Q ss_pred ------------------------------eE-ecCcc--ccc-cc-c-C----CCCCcccccccCceEEEEEeCCHHHH
Q 008588 417 ------------------------------GL-FGGPR--ASK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAA 456 (560)
Q Consensus 417 ------------------------------~~-~g~~~--~~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deA 456 (560)
++ +|+.. ..+ ++ | | ++|.+++||+||||++|++|+|+|||
T Consensus 311 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl~v~~~~~i~~eE~FGPVl~v~~~~~~~ea 390 (484)
T TIGR03240 311 EPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGIIDVTGVAELPDEEHFGPLLQVIRYDDFDEA 390 (484)
T ss_pred CCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEEccCCCCHHHhCCCcCCeEEEEEeCCHHHH
Confidence 11 12211 112 33 5 3 35789999999999999999999999
Q ss_pred HHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 457 IDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 457 i~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
|+++|+++|||++||||+|.++++++++++++|+|+||+.... ...+||||.+.||+|+ ++|.+++ +|++.|++
T Consensus 391 i~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~pfGG~~~SG~g~----~~g~~~~-~~~~~~~~ 465 (484)
T TIGR03240 391 IAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLTGASSAAPFGGIGASGNHR----PSAYYAA-DYCAYPVA 465 (484)
T ss_pred HHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCCCCCCCCCcCCcccccCCC----CCchHHH-hheeeeEE
Confidence 9999999999999999999999999999999999999987543 3557999999999863 3465554 49999999
Q ss_pred EEcC
Q 008588 536 LRGN 539 (560)
Q Consensus 536 ~~~~ 539 (560)
++++
T Consensus 466 ~~~~ 469 (484)
T TIGR03240 466 SLEA 469 (484)
T ss_pred EEec
Confidence 9876
No 82
>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like. The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.
Probab=100.00 E-value=1.1e-73 Score=622.20 Aligned_cols=394 Identities=20% Similarity=0.190 Sum_probs=332.8
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRR--LQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~--w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.++.+|+.++.+...+ .+|+++++++|++||+. |+++|.++|.++|++++++|++|.++|+++++.|++++.
T Consensus 19 ~~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 92 (471)
T cd07139 19 VSPATEEVVGRVPEAT------PADVDAAVAAARRAFDNGPWPRLSPAERAAVLRRLADALEARADELARLWTAENGMPI 92 (471)
T ss_pred ECCCCCCEeEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH
Confidence 4567888889887777 88999999999999985 999999999999999999999999999998876654432
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-cc-ccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IG-QILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIA 266 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~ 266 (560)
.++. ..++..+++.+++++...+. .+ ...+. ..+...+++|+|+|||++|+|| ||. +.++++
T Consensus 93 ----~~~~-------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~i 158 (471)
T cd07139 93 ----SWSR-------RAQGPGPAALLRYYAALARDFPFEERRPG---SGGGHVLVRREPVGVVAAIVPWNAPLFLAALKI 158 (471)
T ss_pred ----HHHH-------HHHHHHHHHHHHHHHHHHHHhcCCccccC---CCCceEEEEEEeccEEEEEcCCchHHHHHHHHH
Confidence 1111 12566666777776643321 11 11111 1233467889999999999998 796 568999
Q ss_pred HHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 267 SLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 267 ~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
++||++||+||+|||+.+|+++..+.+++.+ + +|+|++|+|+++.+.+..|..||++++|+||||+.+|+.|++.
T Consensus 159 ~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~ftGs~~~g~~v~~~ 234 (471)
T cd07139 159 APALAAGCTVVLKPSPETPLDAYLLAEAAEE----AGLPPGVVNVVPADREVGEYLVRHPGVDKVSFTGSTAAGRRIAAV 234 (471)
T ss_pred HHHHhcCCEEEEECCCcCCHHHHHHHHHHHH----cCCCCCcEEEEeCCHHHHHHHhcCCCCCEEEEECcHHHHHHHHHH
Confidence 9999999999999999999999999999887 7 9999999999755678888889999999999999999999887
Q ss_pred cC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----
Q 008588 346 TK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----- 416 (560)
Q Consensus 346 a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----- 416 (560)
++ ||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||++|| |+|+++|+++++++++
T Consensus 235 ~~~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~~~~~~~g~p~~ 313 (471)
T cd07139 235 CGERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRY-DEVVEALAAAVAALKVGDPLD 313 (471)
T ss_pred HHhcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHH-HHHHHHHHHHHHhCCcCCCCC
Confidence 73 8999999999999999999999999999999999977 999999999999999 6999999999877531
Q ss_pred -----------------------------eE-ecCccc----cccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 -----------------------------GL-FGGPRA----SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 -----------------------------~~-~g~~~~----~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+... .++| | | +++++++||+||||++|++|+|+|
T Consensus 314 ~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~ 393 (471)
T cd07139 314 PATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFGPVLSVIPYDDED 393 (471)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCccCCCeEEEeecCCHH
Confidence 12 233321 1333 5 2 368899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
|||+++|+++|||+++|||+|.++++++++++++|+|+||++. ..+.+||||.+.||+|. ++|.+|+++||+.|+
T Consensus 394 eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~-~~~~~PfgG~k~SG~G~----~~g~~~~~~ft~~k~ 468 (471)
T cd07139 394 DAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR-LDFGAPFGGFKQSGIGR----EGGPEGLDAYLETKS 468 (471)
T ss_pred HHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC-CCCCCCCCCcccccCCc----cchHHHHHHHhceeE
Confidence 9999999999999999999999999999999999999999876 45578999999998863 579999999999999
Q ss_pred EE
Q 008588 535 IL 536 (560)
Q Consensus 535 v~ 536 (560)
|+
T Consensus 469 i~ 470 (471)
T cd07139 469 IY 470 (471)
T ss_pred Ee
Confidence 86
No 83
>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like. NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.
Probab=100.00 E-value=1.7e-73 Score=617.56 Aligned_cols=395 Identities=17% Similarity=0.197 Sum_probs=335.1
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (450)
T cd07092 3 DPATGEEIATVPDAS------AADVDAAVAAAHAAFPSWRRTTPAERSKALLKLADAIEENAEELAALESRNTGKPLH-- 74 (450)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHH--
Confidence 467899999987777 889999999999999999999999999999999999999999999998777554321
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccccc-cccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEEPI-GQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
++. ..|+..+++.+++++...+.. +...+ .. ..+...+.+|+|+|||++|+|| ||. +.++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~~AL 143 (450)
T cd07092 75 --LVR-------DDELPGAVDNFRFFAGAARTLEGPAAG-EY-LPGHTSMIRREPIGVVAQIAPWNYPLMMAAWKIAPAL 143 (450)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHHHHHhcCcccC-cc-CCCceeEEEEeccceEEEECCCCcHHHHHHHHHHHHH
Confidence 111 135667777777776433221 21111 11 1233457889999999999998 796 4589999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC--
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-- 347 (560)
++||+||+|||+.+|+++.++.+++++ .+|+|++|+|++ ++++++.|..||++|+|+||||+.+|+.|++++.
T Consensus 144 ~aGN~VIlKps~~~~~~~~~l~~~~~~----glP~g~~~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~v~~~a~~~ 219 (450)
T cd07092 144 AAGNTVVLKPSETTPLTTLLLAELAAE----VLPPGVVNVVCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVARAAADT 219 (450)
T ss_pred HcCCEEEEECCccchHHHHHHHHHHHh----cCCcccEEEeecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhc
Confidence 999999999999999999999999985 499999999995 5557788888999999999999999999998873
Q ss_pred -CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---------
Q 008588 348 -IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------- 416 (560)
Q Consensus 348 -~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------- 416 (560)
+|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 220 ~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~p~~~~~~ 298 (450)
T cd07092 220 LKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVY-DEFVAALVEAVSAIRVGDPDDEDTE 298 (450)
T ss_pred CCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHH-HHHHHHHHHHHhhCCcCCCCCCCCc
Confidence 8999999999999999999999999999999999887 999999999999999 6999999999987632
Q ss_pred ------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 008588 417 ------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 461 (560)
Q Consensus 417 ------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 461 (560)
++ +|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|
T Consensus 299 ~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n 378 (450)
T cd07092 299 MGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELAN 378 (450)
T ss_pred cCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCcCceEEEEEECCHHHHHHHHh
Confidence 11 133221 13 23 5 2 3588999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 462 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 462 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++|||++||||+|.++++++++++++|.|+||+.....+.+||||.+.||+|. ++|++|+++||+.|+|+
T Consensus 379 ~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~~~SG~G~----~~g~~~~~~~~~~k~~~ 449 (450)
T cd07092 379 DVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIPLAAEMPHGGFKQSGYGK----DLSIYALEDYTRIKHVM 449 (450)
T ss_pred CCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCCCCCCCCcCCcccCcCCC----CChHHHHHHHheeeEEe
Confidence 999999999999999999999999999999999887666778999999998863 56999999999999985
No 84
>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like. NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.
Probab=100.00 E-value=1.4e-73 Score=619.01 Aligned_cols=396 Identities=19% Similarity=0.200 Sum_probs=334.9
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
.++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 7 ~~P~t~~~i~~~~~~~------~~~v~~av~~a~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~ 80 (462)
T cd07112 7 INPATGRVLAEVAACD------AADVDRAVAAARRAFESGVWSRLSPAERKAVLLRLADLIEAHRDELALLETLDMGKPI 80 (462)
T ss_pred ECCCCCCEEEEEeCCC------HHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcH
Confidence 3567889999987777 8999999999999998 4999999999999999999999999999999887765543
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
. ++.. .|+...++.+++++...+ ..+...+. ..+...++.|+|+|||++|+|| ||. +.+++++
T Consensus 81 ~----~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GvV~~i~p~N~P~~~~~~~~~ 146 (462)
T cd07112 81 S----DALA-------VDVPSAANTFRWYAEAIDKVYGEVAPT---GPDALALITREPLGVVGAVVPWNFPLLMAAWKIA 146 (462)
T ss_pred H----HHHH-------HHHHHHHHHHHHHHHHHHHhcCceecC---CCCeEEEEEEeeeeeEEEECCCchHHHHHHHHHH
Confidence 1 2211 245555666666554322 12222111 1233467789999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
|||++||+||+|||+++|.|+..+++++.+ + +|+|++|+|++ +.++++.|..|+++|+|+||||+.+|+.|++.
T Consensus 147 ~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~----aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~ 222 (462)
T cd07112 147 PALAAGNSVVLKPAEQSPLTALRLAELALE----AGLPAGVLNVVPGFGHTAGEALGLHMDVDALAFTGSTEVGRRFLEY 222 (462)
T ss_pred HHHHcCCeeeeeCCCCCCHHHHHHHHHHHh----cCCCCCcEEEEeCCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999986 7 99999999996 66788889899999999999999999999876
Q ss_pred c----CCCEEEecCccceEEEcCCC-CHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---
Q 008588 346 T----KIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--- 416 (560)
Q Consensus 346 a----~~~~~lElGGk~p~iV~~dA-Dld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--- 416 (560)
+ .||+++|||||||+||++|| |+|.|++.+++|+|.|+| .|+|++|+|||+++| |+|+++|+++++++++
T Consensus 223 aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p 301 (462)
T cd07112 223 SGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIK-DEFLEKVVAAAREWKPGDP 301 (462)
T ss_pred HHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHH-HHHHHHHHHHHhcCCcCCC
Confidence 5 38999999999999999999 999999999999999987 999999999999999 6999999999876532
Q ss_pred -------------------------------eE-ecCccc----ccc-c-c-C-----CCCCcccccccCceEEEEEeCC
Q 008588 417 -------------------------------GL-FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDD 452 (560)
Q Consensus 417 -------------------------------~~-~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~ 452 (560)
++ +|+... .++ + | | +++++++||+||||++|++|+|
T Consensus 302 ~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~ 381 (462)
T cd07112 302 LDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIFGPVLSVITFDS 381 (462)
T ss_pred CCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCCCCCceEEEEEeCC
Confidence 22 244322 133 3 5 2 3689999999999999999999
Q ss_pred HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEE
Q 008588 453 VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 453 ~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
+||||+++|+++|||++||||+|.+++.++++++++|+|+||+.....+..||||.|+||+|. ++|++|+++||+.
T Consensus 382 ~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~PfgG~k~SG~G~----~~g~~~~~~f~~~ 457 (462)
T cd07112 382 EEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFDEGDITTPFGGFKQSGNGR----DKSLHALDKYTEL 457 (462)
T ss_pred HHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCcccccCCc----cchHHHHHHHhce
Confidence 999999999999999999999999999999999999999999876666678999999999763 5699999999999
Q ss_pred EEEEE
Q 008588 533 RWILR 537 (560)
Q Consensus 533 K~v~~ 537 (560)
|++++
T Consensus 458 k~i~~ 462 (462)
T cd07112 458 KTTWI 462 (462)
T ss_pred eEEEC
Confidence 99863
No 85
>cd07099 ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.
Probab=100.00 E-value=2.4e-73 Score=616.81 Aligned_cols=395 Identities=18% Similarity=0.159 Sum_probs=330.1
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++++|++++..
T Consensus 2 ~P~t~~~~~~~~~~~------~~~v~~av~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~-- 73 (453)
T cd07099 2 NPATGEVLGEVPVTD------PAEVAAAVARARAAQRAWAALGVEGRAQRLLRWKRALADHADELAELLHAETGKPRA-- 73 (453)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 456888899888877 899999999999999999999999999999999999999999999998877655431
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccc-cccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQ-ILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
++ ..|+...++.++++++..+ ..+. ..+......+...+++++|+|||++|+|| +|. +..++++||
T Consensus 74 --~~--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~l~~A 143 (453)
T cd07099 74 --DA--------GLEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVVGVISPWNYPLLTPMGDIIPA 143 (453)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEecceEEEEECCCChHHHHHHHHHHHH
Confidence 11 1245555555665553221 1111 11100001234567889999999999997 696 568999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 346 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a-- 346 (560)
|++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++..++++.|.+| .||+|+||||+++|+.|++.+
T Consensus 144 LaaGN~vilKps~~~p~~~~~l~~~l~~----ag~P~g~~~vv~g~~~~~~~l~~~-~vd~V~ftGs~~~g~~i~~~aa~ 218 (453)
T cd07099 144 LAAGNAVVLKPSEVTPLVGELLAEAWAA----AGPPQGVLQVVTGDGATGAALIDA-GVDKVAFTGSVATGRKVMAAAAE 218 (453)
T ss_pred HHcCCEEEEECCccchHHHHHHHHHHHH----cCCCCCeEEEEeCCchHHHHHhcC-CCCEEEEECCHHHHHHHHHHHHh
Confidence 9999999999999999999999999987 6 9999999999644667777766 599999999999999999877
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 347 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 347 -~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
.+|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~l~~G~~~~~~~ 297 (453)
T cd07099 219 RLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVY-DEFVARLVAKARALRPGADDIGDA 297 (453)
T ss_pred cCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999887621
Q ss_pred --------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
++ +|+.+. .+ ++ | | ++|++++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~ 377 (453)
T cd07099 298 DIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGPVLPVMPVADEDEAIAL 377 (453)
T ss_pred cccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHH
Confidence 12 244332 23 33 6 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+|+++|||++||||+|.++++++++++++|.||||+.... .+..||||.+.||+| +++|.+|+++||+.|+|+
T Consensus 378 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~~PfGG~~~SG~g----~~~g~~~~~~~t~~k~v~ 452 (453)
T cd07099 378 ANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLLTAGIPALPFGGVKDSGGG----RRHGAEGLREFCRPKAIA 452 (453)
T ss_pred HhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCCCCCcccccCC----ccChHHHHHHhcceEEEe
Confidence 9999999999999999999999999999999999987543 357899999888865 367999999999999985
No 86
>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins. Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.
Probab=100.00 E-value=1.9e-73 Score=612.35 Aligned_cols=383 Identities=21% Similarity=0.209 Sum_probs=314.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 214 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~ 214 (560)
++|+++|+++|++||+.|++++..+|.++|++++++|++|+++|++++++|++++.. ++...++..+...+++++.
T Consensus 4 ~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----e~~~~ev~~~~~~~~~~a~ 79 (436)
T cd07135 4 LDEIDSIHSRLRATFRSGKTKDLEYRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPF----ETLLTEVSGVKNDILHMLK 79 (436)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHhHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999888766532 3222222222333444444
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHH
Q 008588 215 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 292 (560)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~ 292 (560)
.++.+........... . ..+...+++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.+|+++..++
T Consensus 80 ~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~ 155 (436)
T cd07135 80 NLKKWAKDEKVKDGPL---A-FMFGKPRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLA 155 (436)
T ss_pred HHHHhhCCcccCCccc---c-cCCCceEEEeccCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHH
Confidence 3333221111100000 0 0122457789999999999997 796 67899999999999999999999999999999
Q ss_pred HHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCH
Q 008588 293 KVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANL 368 (560)
Q Consensus 293 ~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADl 368 (560)
+++++ .+|+|++|+|++ ++++++ |..|| ||+|+||||+.+|+.|++++. +|+++|||||||+||++|||+
T Consensus 156 ~l~~~----~lP~g~v~vv~g~~~~~~~-l~~~~-vd~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dADl 229 (436)
T cd07135 156 ELVPK----YLDPDAFQVVQGGVPETTA-LLEQK-FDKIFYTGSGRVGRIIAEAAAKHLTPVTLELGGKSPVIVTKNADL 229 (436)
T ss_pred HHHHH----hCCcCEEEEEcCCchhHHH-HHhCC-CCEEEEECCcHHHHHHHHHHHhcCCCeEEEccCCCcEEECCCCCH
Confidence 99986 499999999995 556666 45678 999999999999999988763 899999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------------------------------e
Q 008588 369 DVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------G 417 (560)
Q Consensus 369 d~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------~ 417 (560)
|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.+ +
T Consensus 230 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~ 308 (436)
T cd07135 230 ELAAKRILWGKFGNAGQICVAPDYVLVDPSVY-DEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGK 308 (436)
T ss_pred HHHHHHHHHHHhccCCceecCCCEEeccHHHH-HHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCe
Confidence 9999999999999987 999999999999999 6999999999876521 1
Q ss_pred E-ecCccc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcC
Q 008588 418 L-FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD 487 (560)
Q Consensus 418 ~-~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~ 487 (560)
+ .|+... .+ ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++
T Consensus 309 v~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~ 388 (436)
T cd07135 309 VVIGGEMDEATRFIPPTIVSDVSWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTR 388 (436)
T ss_pred EEECCCcCCCCCEEccEEEecCCCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCC
Confidence 1 233221 12 23 5 2 357899999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 488 SAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 488 ~G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+|.|+||+.+.. .+..||||.|+||+|. ++|++|+++||+.|+|.
T Consensus 389 ~g~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~t~~k~i~ 435 (436)
T cd07135 389 SGGVVINDTLIHVGVDNAPFGGVGDSGYGA----YHGKYGFDTFTHERTVV 435 (436)
T ss_pred cCeEEECCccccccCCCCCcCCcCcccCCc----cccHhHHHHhccccccc
Confidence 999999986543 3568999999999863 56999999999999874
No 87
>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins. Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.
Probab=100.00 E-value=2e-73 Score=611.45 Aligned_cols=375 Identities=21% Similarity=0.238 Sum_probs=310.3
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+++++|++||+.|+.++..+|.++|++++++|++|+|+|++++++|++++. .++.. .|+...++.++++
T Consensus 3 ~a~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~ 71 (432)
T cd07137 3 RLVRELRETFRSGRTRSAEWRKSQLKGLLRLVDENEDDIFAALRQDLGKPS----AESFR-------DEVSVLVSSCKLA 71 (432)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH----HHHHH-------HHHHHHHHHHHHH
Confidence 588999999999999999999999999999999999999999988876543 23222 2444455555554
Q ss_pred hcccc-cccc-c--ccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHH
Q 008588 220 ADMEE-PIGQ-I--LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 293 (560)
Q Consensus 220 ~~~~~-~~~~-~--~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~ 293 (560)
+.... ..+. . .+.. ..+...+++|+|+|||++|+|| ||. +..++++|||++||+||+|||+.||+|+.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~ 149 (432)
T cd07137 72 IKELKKWMAPEKVKTPLT--TFPAKAEIVSEPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAK 149 (432)
T ss_pred HHHHHHHhCCcccCCCcc--cCCceeEEEEecCcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHH
Confidence 43211 0111 0 1100 0122457789999999999998 796 568999999999999999999999999999999
Q ss_pred HHHHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHH
Q 008588 294 VITSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 370 (560)
Q Consensus 294 l~~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~ 370 (560)
++.+ ++|+|++|+|+++.+.++.|..| .+|+|+||||+++|++|++.+. ||+++|||||||+||++|||+|.
T Consensus 150 ~~~~----~~P~gvv~~v~g~~~~~~~L~~~-~i~~v~fTGs~~~g~~v~~~aa~~~~~~~lElgG~np~iV~~dAdl~~ 224 (432)
T cd07137 150 LIPE----YLDTKAIKVIEGGVPETTALLEQ-KWDKIFFTGSPRVGRIIMAAAAKHLTPVTLELGGKCPVIVDSTVDLKV 224 (432)
T ss_pred HHHH----hCCcCeEEEEeCCHHHHHHHHhC-CCCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEEcCCCCHHH
Confidence 9986 49999999999754566666666 5999999999999999988873 99999999999999999999999
Q ss_pred HHHHHHhhcC-CCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------------------------------
Q 008588 371 AKNIVIDAKI-DYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------------------------------- 416 (560)
Q Consensus 371 Aa~~iv~~~f-~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------------------------------- 416 (560)
|++.+++|+| .|+| +|+|++|+|||+++| |+|+++|+++++++..
T Consensus 225 aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga 303 (432)
T cd07137 225 AVRRIAGGKWGCNNGQACIAPDYVLVEESFA-PTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVAD 303 (432)
T ss_pred HHHHHHHHhhhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCC
Confidence 9999999999 4776 999999999999999 6999999998877521
Q ss_pred e-EecCccc-cccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhc
Q 008588 417 G-LFGGPRA-SKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 486 (560)
Q Consensus 417 ~-~~g~~~~-~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l 486 (560)
. ++|+... .++| | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 304 ~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l 383 (432)
T cd07137 304 KIVHGGERDEKNLYIEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAET 383 (432)
T ss_pred eEEeCCCcCCCCCEEeeEEEecCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhC
Confidence 1 1244321 2333 5 2 25889999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 487 DSAAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 487 ~~G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
++|.|+||++... .+.+||||.+.||+|. ++|.+++++||+.|+|++
T Consensus 384 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~f~~~k~v~~ 432 (432)
T cd07137 384 SSGGVTFNDTVVQYAIDTLPFGGVGESGFGA----YHGKFSFDAFSHKKAVLY 432 (432)
T ss_pred CcCcEEECCccccccCCCCCCCCcCcCcCCc----cccHHHHHHhccCceeeC
Confidence 9999999987543 3568999999999863 569999999999999864
No 88
>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like. Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.
Probab=100.00 E-value=1.4e-73 Score=619.85 Aligned_cols=385 Identities=19% Similarity=0.216 Sum_probs=328.1
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.
T Consensus 41 ~~nP~t~~~i~~~~~a~------~~~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~- 113 (480)
T cd07111 41 TINPATGEVLASVLQAE------EEDVDAAVAAARTAFESWSALPGHVRARHLYRIARHIQKHQRLFAVLESLDNGKPI- 113 (480)
T ss_pred eECCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCH-
Confidence 34667888899887777 89999999999999999999999999999999999999999999998876665442
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLA 269 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~A 269 (560)
.++. ..++...++.+++++++.+... + .+..++|+|||++|+|| ||. +.++++++|
T Consensus 114 ---~~a~-------~~ev~~~~~~~~~~~~~~~~~~----------~--~~~~~~P~GVV~~I~PwN~P~~~~~~~i~~A 171 (480)
T cd07111 114 ---RESR-------DCDIPLVARHFYHHAGWAQLLD----------T--ELAGWKPVGVVGQIVPWNFPLLMLAWKICPA 171 (480)
T ss_pred ---HHHH-------HHHHHHHHHHHHHHHHHHHHhc----------C--CcccceecceEEEECCCccHHHHHHHHHHHH
Confidence 1221 1245566666666554322110 1 13458999999999998 796 568999999
Q ss_pred HHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 008588 270 IRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 347 (560)
Q Consensus 270 LaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~- 347 (560)
|++||+||+|||+.||.++..+++++++ + ||+|+||+|++..+++..|..||+||+|+||||+.+|+.|++.+.
T Consensus 172 LaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~v~~~aa~ 247 (480)
T cd07111 172 LAMGNTVVLKPAEYTPLTALLFAEICAE----AGLPPGVLNIVTGNGSFGSALANHPGVDKVAFTGSTEVGRALRRATAG 247 (480)
T ss_pred HHcCCEEEEECCCCChHHHHHHHHHHHh----cCCCcccEEEEeCCchHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhc
Confidence 9999999999999999999999999886 7 999999999965467888888999999999999999999988773
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 348 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 348 --~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
||+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 248 ~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~-d~f~~~l~~~~~~~~vg~p~~~~~ 326 (480)
T cd07111 248 TGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVA-EELIRKLKERMSHLRVGDPLDKAI 326 (480)
T ss_pred cCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHH-HHHHHHHHHHHHhcCCCCCCCCCC
Confidence 8999999999999999999999999999999999977 999999999999999 6999999999887532
Q ss_pred --------------------------eE-ecCcc--ccccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 --------------------------GL-FGGPR--ASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 --------------------------~~-~g~~~--~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
++ .|+.. ..++| | | ++|.+++||+||||++|++|+|+||||++
T Consensus 327 ~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~ 406 (480)
T cd07111 327 DMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVLVVLTFRTAKEAVAL 406 (480)
T ss_pred ccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCCeeEeecCCCHHHHHHH
Confidence 11 12221 12333 5 2 35889999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRW 534 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~ 534 (560)
+|+++|||++||||+|.+++.++++++++|+|+||+........||||.|.||+|. ++|.+|+++||+.|+
T Consensus 407 ~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~~~~k~ 477 (480)
T cd07111 407 ANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNLFDAAAGFGGYRESGFGR----EGGKEGLYEYLRPSW 477 (480)
T ss_pred HhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCcCCcccccCCc----cchHHHHHHHhhccC
Confidence 99999999999999999999999999999999999987666678999999999863 569999999999986
No 89
>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1.2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....
Probab=100.00 E-value=6.3e-74 Score=622.54 Aligned_cols=394 Identities=22% Similarity=0.291 Sum_probs=335.2
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
+.++.+|+.++++...+ .+|+++++++|++||+.|++++..+|.++|++++++|++|.++|+++++.|++++.
T Consensus 11 v~~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~- 83 (462)
T PF00171_consen 11 VINPATGEVIGEVPSAT------AEDVDRAVEAARAAFKEWSKLPAAERARILERFADLLEERRDELAELIALETGKPI- 83 (462)
T ss_dssp EEETTTECEEEEEEEBS------HHHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSH-
T ss_pred CCCCCCcCEEEEEcCCC------HHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHhhccccccccccccccccc-
Confidence 34567899999998888 89999999999999999999999999999999999999999999999887765442
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+..+++.++++++..+. .++..+. ..+...+++++|+|||++|+|| +|. +.++++++
T Consensus 84 ---~~a--------~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~~~~ 149 (462)
T PF00171_consen 84 ---AEA--------RGEVDRAIDFLRYYADAARKLAGEVLPS---DPGSRNYTRREPLGVVLIITPWNFPLYLAVWKIAP 149 (462)
T ss_dssp ---HHH--------HHHHHHHHHHHHHHHHHHHHHTEEEEEE---STTEEEEEEEEE-SEEEEEE-SSSCTHHHHHHHHH
T ss_pred ---ccc--------cchhhhhhhhhhhhhhcccceehhhccc---ccccccccccccccceeecccccccccccccchhh
Confidence 222 23666777777777654332 2322221 2466788999999999999997 786 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.+|+++.++++++++ + +|+|++|+|++ +.+++..|..||++++|+||||+++|+.|++.+
T Consensus 150 ALaaGN~VVlkps~~~~~~~~~l~~~~~~----AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~a 225 (462)
T PF00171_consen 150 ALAAGNTVVLKPSEQAPLTALLLAELLEE----AGLPPGVVNVVPGDGSEVGEALVSHPDVDLVSFTGSTATGRAIAKAA 225 (462)
T ss_dssp HHHTT-EEEEEEBTTSHHHHHHHHHHHHH----HTSTTTSEEEECSSTHHHHHHHHHTTTEEEEEEESEHHHHHHHHHHH
T ss_pred hhcccccceeeeccccccccccchhhccc----cccccccccccccccccccceeeeccccceeeecchhhhhhhhhhhc
Confidence 99999999999999999999999999997 5 99999999996 778888898999999999999999999999887
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------ 416 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------ 416 (560)
. +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 226 ~~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~l~~g~~~~~ 304 (462)
T PF00171_consen 226 AKNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIY-DEFVEALKERVAKLRVGDPLDE 304 (462)
T ss_dssp HTTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHH-HHHHHHHHHHHHTSEBSSTTST
T ss_pred ccccccccccccccceeeEecccccccccccccchhccccccccccccccccccccc-chhhhhhhhccccccccCCccc
Confidence 3 9999999999999999999999999999999999987 999999999999999 6999999999987521
Q ss_pred ----------------------------eE-ecCc-----cccccc--c-C-----CCCCcccccccCceEEEEEeCCHH
Q 008588 417 ----------------------------GL-FGGP-----RASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 417 ----------------------------~~-~g~~-----~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++ +|+. ...++| | | ++|++++||+||||++|++|+|+|
T Consensus 305 ~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~ 384 (462)
T PF00171_consen 305 STDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEEIFGPVLPVVPYDDLD 384 (462)
T ss_dssp TCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC-SSSEEEEEEESSHH
T ss_pred cccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccceecccccch
Confidence 22 2441 112233 5 2 468999999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCC-CccCCccceeccccCcccccccchhcceEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDG-ARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~-~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
|||+++|+++|||+++|||+|.++++++++++++|+|+||+++..... .||||.+.||+|. ++|.+|+++||+.|
T Consensus 385 eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~G~----~~g~~~l~~~~~~k 460 (462)
T PF00171_consen 385 EAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGDPDGLPFGGFKQSGIGR----EGGPEGLDEFTQIK 460 (462)
T ss_dssp HHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGGTTSSEBE-SGGGEESE----BSHHHHHHGTEEEE
T ss_pred hhhhcccccCCCceeEEecccccccccccccccccceeecCCcccccccCCCCCcccccCCc----chHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999998766554 5999999999873 56999999999999
Q ss_pred EE
Q 008588 534 WI 535 (560)
Q Consensus 534 ~v 535 (560)
+|
T Consensus 461 ~V 462 (462)
T PF00171_consen 461 TV 462 (462)
T ss_dssp EE
T ss_pred CC
Confidence 97
No 90
>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.
Probab=100.00 E-value=1.9e-73 Score=609.81 Aligned_cols=371 Identities=17% Similarity=0.208 Sum_probs=301.3
Q ss_pred hhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHH
Q 008588 136 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 215 (560)
Q Consensus 136 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 215 (560)
+|+++|+++|++||+.|+++|.++|.++|++++++|++|.++|++++++|.+++. .++. +..
T Consensus 4 ~~v~~av~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~~~~--------------~~~ 65 (429)
T cd07121 4 ATVDDAVAAAKAAQKQYRKCTLADREKIIEAIREALLSNAEELAEMAVEETGMGR----VEDK--------------IAK 65 (429)
T ss_pred hhHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH----HHHH--------------HHH
Confidence 6899999999999999999999999999999999999999999998876654432 1111 112
Q ss_pred HHHHhccccccccc-c-cccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHH
Q 008588 216 IRILADMEEPIGQI-L-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 291 (560)
Q Consensus 216 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l 291 (560)
++++++.. .+.. . +......+...+++|+|+|||++|+|| ||. +.++++++||++||+||+||||.||+|+.++
T Consensus 66 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l 143 (429)
T cd07121 66 NHLAAEKT--PGTEDLTTTAWSGDNGLTLVEYAPFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYA 143 (429)
T ss_pred HHHHHHhc--CcccccccccccCCCcceEEEEcccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHH
Confidence 22222110 0100 0 000001122346788999999999998 796 5689999999999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHH
Q 008588 292 HKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLD 369 (560)
Q Consensus 292 ~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld 369 (560)
++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|+++ .||+++|||||||+||++|||||
T Consensus 144 ~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~I~fTGs~~~g~~v~~~-~k~~~lelGGk~p~iV~~dADld 222 (429)
T cd07121 144 VELINKAIAEAGGPDNLVVTVEEPTIETTNELMAHPDINLLVVTGGPAVVKAALSS-GKKAIGAGAGNPPVVVDETADIE 222 (429)
T ss_pred HHHHHHHHHHcCCCcceEEEecCCChHHHHHHHcCCCccEEEeeCCHHHHHHHHhC-CCceEeecCCCceEEEecCCCHH
Confidence 99999888888 99999999996 55677788889999999999999999999876 59999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhc----------------------CCeE-ecCcc--
Q 008588 370 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE----------------------GVGL-FGGPR-- 423 (560)
Q Consensus 370 ~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~----------------------~~~~-~g~~~-- 423 (560)
+|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ ..+ |.++ .|+..
T Consensus 223 ~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~ 300 (429)
T cd07121 223 KAARDIVQGASFDNNLPCIAEKEVIAVDSVA-DYLIAAMQRN-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASK 300 (429)
T ss_pred HHHHHHHhcccccCCCCCCccceEEEeHHHH-HHHHHHHHHC-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHH
Confidence 999999999999887 999999999999999 6999999876 211 1111 12221
Q ss_pred c---cccc-----c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEecCHHHHHHHHhhcC
Q 008588 424 A---SKLL-----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVD 487 (560)
Q Consensus 424 ~---~~~~-----p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~I~t~d~~~a~~~~~~l~ 487 (560)
. .+++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|+++++
T Consensus 301 ~~~~~G~~~~~~~ptil~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~ 380 (429)
T cd07121 301 ILKAAGIEVPADIRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQ 380 (429)
T ss_pred HHHHcCCCCCCCCeEEEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCC
Confidence 0 1333 3 2 3689999999999999999999999999999999999 99999999999999999999
Q ss_pred eeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 488 SAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 488 ~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+|+||||.++. ...||||.+.|+++- +|++| +.++..|++..
T Consensus 381 aG~v~iN~~~~--~~~p~gG~k~s~~~~-----~~~~~-~~~~~~~~~~~ 422 (429)
T cd07121 381 TTIFVKNGPSY--AGLGVGGEGYTTFTI-----AGPTG-EGLTSARTFTR 422 (429)
T ss_pred ceEEEEcCCCc--CccccCCCccceEEe-----cCCcC-cCccChhhhhe
Confidence 99999998754 568999888776632 35566 66677776653
No 91
>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins. NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.
Probab=100.00 E-value=3.2e-73 Score=612.10 Aligned_cols=381 Identities=20% Similarity=0.212 Sum_probs=317.9
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+++++|++||+.|+++|..+|.++|++++++|++|.++|++++++|++++.. ++...++..+..+++++++.++++
T Consensus 2 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~ 77 (443)
T cd07132 2 EAVRRAREAFSSGKTRPLEFRIQQLEALLRMLEENEDEIVEALAKDLRKPKF----EAVLSEILLVKNEIKYAISNLPEW 77 (443)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999988766532 333334444556777777777766
Q ss_pred hcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHH
Q 008588 220 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 297 (560)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~ 297 (560)
...... ..... ......++.++|+|||++|+|| ||. +..+++++||++||+||+|||+.||.|+..+++++.+
T Consensus 78 ~~~~~~-~~~~~----~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~ 152 (443)
T cd07132 78 MKPEPV-KKNLA----TLLDDVYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPK 152 (443)
T ss_pred hCCccC-CCccc----cCCCceEEEEecccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 431111 11000 0112357889999999999997 795 6789999999999999999999999999999999986
Q ss_pred hcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHHH
Q 008588 298 AIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKN 373 (560)
Q Consensus 298 al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa~ 373 (560)
++|+|++|+|++ +++...++ + ++||+|+||||+++|+.|++.+. +|+++|||||||+||++|||+|.|++
T Consensus 153 ----~lp~gv~~vv~g~~~~~~~l~-~-~~vd~V~fTGs~~~g~~i~~~a~~~~~~~~lElgG~~p~iV~~dADl~~aa~ 226 (443)
T cd07132 153 ----YLDKECYPVVLGGVEETTELL-K-QRFDYIFYTGSTSVGKIVMQAAAKHLTPVTLELGGKSPCYVDKSCDIDVAAR 226 (443)
T ss_pred ----hCCcCeEEEEeCCHHHHHHHH-h-CCCCEEEEECChHHHHHHHHHHHhhCCceEEEcCCCCceEEcCCCCHHHHHH
Confidence 499999999996 44445544 4 48999999999999999988763 99999999999999999999999999
Q ss_pred HHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC----------------------------e-EecCcc
Q 008588 374 IVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGPR 423 (560)
Q Consensus 374 ~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------------------------~-~~g~~~ 423 (560)
.+++|+|.|+| +|+|++|+|||+++| |+|+++|+++++++.. + ++|+..
T Consensus 227 ~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~ 305 (443)
T cd07132 227 RIAWGKFINAGQTCIAPDYVLCTPEVQ-EKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQT 305 (443)
T ss_pred HHHHHHHhcCCCceeCCcEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCcc
Confidence 99999999987 999999999999999 6999999998876521 0 123322
Q ss_pred c-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEc
Q 008588 424 A-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHN 494 (560)
Q Consensus 424 ~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN 494 (560)
. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||
T Consensus 306 ~~~~~~~~Ptvl~~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN 385 (443)
T cd07132 306 DEKERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVN 385 (443)
T ss_pred CCCCCEEeeEEEeCCCCCChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEC
Confidence 1 12 33 5 2 3688999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEEEcCc
Q 008588 495 ASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 540 (560)
Q Consensus 495 ~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~ 540 (560)
+.... .+..||||.+.||+|. ++|.+|+++|++.|+|++++.
T Consensus 386 ~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~v~~~~~ 429 (443)
T cd07132 386 DTIMHYTLDSLPFGGVGNSGMGA----YHGKYSFDTFSHKRSCLVKSL 429 (443)
T ss_pred CcccccCCCCCCCCCCCcccCCC----cccHHHHHHhccccEEEEccc
Confidence 87543 2568999999998863 569999999999999987653
No 92
>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like. Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.
Probab=100.00 E-value=4e-73 Score=611.05 Aligned_cols=378 Identities=21% Similarity=0.253 Sum_probs=320.2
Q ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHH
Q 008588 137 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 216 (560)
Q Consensus 137 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~ 216 (560)
|+++++++|++||+.|++++.++|.++|++++++|++|.++|++++++|++++.. ++ ..++..+++.+
T Consensus 1 ~v~~ai~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (432)
T cd07105 1 DADQAVEAAAAAFPAWSKTPPSERRDILLKAADLLESRRDEFIEAMMEETGATAA----WA--------GFNVDLAAGML 68 (432)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHH----HH--------HHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999998877655421 11 23566677777
Q ss_pred HHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHH
Q 008588 217 RILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 293 (560)
Q Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~ 293 (560)
+++++..+. .+...+.. ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|+|+..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~ 146 (432)
T cd07105 69 REAASLITQIIGGSIPSD--KPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGR 146 (432)
T ss_pred HHHHHHHHHhcCeecccC--CCCceeEEEEecceEEEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHH
Confidence 777653321 12222211 1233467889999999999998 796 568999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCcEEeecCC----chhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCC
Q 008588 294 VITSAIPDT-VGEKLIGLVTSR----EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKS 365 (560)
Q Consensus 294 l~~~al~~a-lP~gvv~vv~~~----~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~d 365 (560)
++.+ + +|+|+||+|++. .++++.|..||+||+|+||||+.+|+.|++++. +|+++|||||||+||++|
T Consensus 147 ~~~~----aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~aa~~~~~~~lElgGk~p~iV~~d 222 (432)
T cd07105 147 VFHE----AGLPKGVLNVVTHSPEDAPEVVEALIAHPAVRKVNFTGSTRVGRIIAETAAKHLKPVLLELGGKAPAIVLED 222 (432)
T ss_pred HHHH----cCcCCCcEEEEeCCCCchHHHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHhcCCeEEEeCCCCCceEECCC
Confidence 9987 6 999999999952 246788888999999999999999999998773 899999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC-----------------------------
Q 008588 366 ANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------------------------- 415 (560)
Q Consensus 366 ADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~----------------------------- 415 (560)
||+|.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.
T Consensus 223 adl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~g 301 (432)
T cd07105 223 ADLDAAANAALFGAFLNSGQICMSTERIIVHESIA-DEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKG 301 (432)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHH-HHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999987 999999999999999 699999999887543
Q ss_pred CeE-ecCccc---ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 008588 416 VGL-FGGPRA---SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 483 (560)
Q Consensus 416 ~~~-~g~~~~---~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~ 483 (560)
.++ .|+... .++ + | | ++|.+++||+||||++|++|+|.||||+++|+++|||++||||+|.+++++++
T Consensus 302 a~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~ 381 (432)
T cd07105 302 AKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVA 381 (432)
T ss_pred CEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHH
Confidence 222 344332 233 3 6 2 35789999999999999999999999999999999999999999999999999
Q ss_pred hhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 484 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 484 ~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++++|.|+||+++.. .+..||||.+.||+|. ++|++|+++||+.|+|++
T Consensus 382 ~~l~~g~v~vN~~~~~~~~~~PfgG~~~SG~G~----~~g~~~l~~~~~~k~v~~ 432 (432)
T cd07105 382 KRIESGAVHINGMTVHDEPTLPHGGVKSSGYGR----FNGKWGIDEFTETKWITI 432 (432)
T ss_pred HhCCcCeEEECCCCCCCCCCCCCCCcccccccc----cChHHHHHHhhceEEEeC
Confidence 9999999999987654 3568999999998863 569999999999999863
No 93
>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like. Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.
Probab=100.00 E-value=6.8e-73 Score=611.55 Aligned_cols=396 Identities=20% Similarity=0.206 Sum_probs=328.7
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+|+++++++|+++ |+++|.++|.++|++++++|++|.++|++++++|.+++..
T Consensus 4 ~~P~tg~~i~~~~~~~------~~~v~~av~~A~~~---~~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~- 73 (451)
T cd07146 4 RNPYTGEVVGTVPAGT------EEALREALALAASY---RSTLTRYQRSAILNKAAALLEARREEFARLITLESGLCLK- 73 (451)
T ss_pred cCCCCCCEEEEEcCCC------HHHHHHHHHHHHHH---HhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH-
Confidence 3567888889887777 88999999999875 8889999999999999999999999999998777654421
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccc--cCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTE--LADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
++ ..|+...++.+++++.... ..++..+... ...+...+.+|+|+|||++|+|| ||. +.+++++
T Consensus 74 ---~a--------~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~P~N~P~~~~~~~~~ 142 (451)
T cd07146 74 ---DT--------RYEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQVAHKIA 142 (451)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEEEeccceEEEEccCChHHHHHHHHHH
Confidence 22 2356666667776654321 1122211100 01233467889999999999998 796 5679999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
|||++||+||+|||+.||+++..+.+++++ + +|+|++|++++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 143 ~ALaaGN~VilKps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~l~~~~~i~~V~fTGs~~~g~~i~~~ 218 (451)
T cd07146 143 PAIAANNRIVLKPSEKTPLSAIYLADLLYE----AGLPPDMLSVVTGEPGEIGDELITHPDVDLVTFTGGVAVGKAIAAT 218 (451)
T ss_pred HHHHcCCEEEEECCCCchHHHHHHHHHHHH----cCcCccceEEEecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999995 56678888899999999999999999999887
Q ss_pred cC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 346 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 346 a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++++
T Consensus 219 a~~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~g~p~~~~ 297 (451)
T cd07146 219 AGYKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA-DEFVDLLVEKSAALVVGDPMDPA 297 (451)
T ss_pred hcCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH-HHHHHHHHHHHhcCCCCCCCCCC
Confidence 75 8999999999999999999999999999999999987 999999999999999 6999999999987632
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 008588 417 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 461 (560)
Q Consensus 417 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 461 (560)
++ .|+.....++ | | ++|++++||+||||++|++|+|+||||+++|
T Consensus 298 ~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n 377 (451)
T cd07146 298 TDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLDEAIAISN 377 (451)
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEeecCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHh
Confidence 11 1222111233 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 462 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 462 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+++|||++||||+|.+++++|++++++|+|+||+.+.. .+..||||.|.||++. +++|++|+++||+.|++++
T Consensus 378 ~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~~g---~~~g~~~~~~f~~~k~~~~ 451 (451)
T cd07146 378 STAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVPGFRSELSPFGGVKDSGLGG---KEGVREAMKEMTNVKTYSL 451 (451)
T ss_pred CCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCCcCcccccCCCc---ccChHHHHHHHhceeEEeC
Confidence 99999999999999999999999999999999986544 3568999999998521 2457999999999999863
No 94
>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like. Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.
Probab=100.00 E-value=4.7e-73 Score=609.67 Aligned_cols=377 Identities=17% Similarity=0.158 Sum_probs=310.1
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+.+++|++||+.|+++|..+|.++|++++++|++|.+||++++++|+++. . ..++.. .|+...++.++++
T Consensus 2 ~~~~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~-~--~~ea~~-------~ev~~~i~~~~~~ 71 (434)
T cd07133 2 ALLERQKAAFLANPPPSLEERRDRLDRLKALLLDNQDALAEAISADFGHR-S--RHETLL-------AEILPSIAGIKHA 71 (434)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C--hHHHHH-------HHHHHHHHHHHHH
Confidence 35788999999999999999999999999999999999999998887641 0 112211 2344444445544
Q ss_pred hcccc-cccccc-cccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 220 ADMEE-PIGQIL-KRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 220 ~~~~~-~~~~~~-~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
++... ..+... .......+...+++|+|+|||++|+|| ||. +++++++|||++||+||+|||+.+|.|+..+++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~ 151 (434)
T cd07133 72 RKHLKKWMKPSRRHVGLLFLPAKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELL 151 (434)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHH
Confidence 43211 111110 000000122457889999999999997 795 67899999999999999999999999999999999
Q ss_pred HHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHH
Q 008588 296 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAK 372 (560)
Q Consensus 296 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa 372 (560)
++ ++|+|+||+|+++.++++.|.+|+ +|+|+||||+++|+.|++.+. ||+++|||||||+||++|||+|.|+
T Consensus 152 ~~----alP~g~~~~v~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~~~iV~~dadl~~aa 226 (434)
T cd07133 152 AE----YFDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMRAAAENLTPVTLELGGKSPAIIAPDADLAKAA 226 (434)
T ss_pred HH----hCCcCeEEEEeCChHHHHHHHhCC-CCEEEEeCchHHHHHHHHHHHhcCceEEEEccCCCcEEEeCCCCHHHHH
Confidence 87 499999999997656778787765 999999999999999998873 8999999999999999999999999
Q ss_pred HHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------------------------------eE-
Q 008588 373 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------GL- 418 (560)
Q Consensus 373 ~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------------------------------~~- 418 (560)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|+++++++.. ++
T Consensus 227 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~ 305 (434)
T cd07133 227 ERIAFGKLLNAGQTCVAPDYVLVPEDKL-EEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVI 305 (434)
T ss_pred HHHHHHHhccCCCcccCCCEEEEcHHHH-HHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 999999999987 999999999999999 6999999998876421 22
Q ss_pred ecCccc----ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhc
Q 008588 419 FGGPRA----SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV 486 (560)
Q Consensus 419 ~g~~~~----~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l 486 (560)
+|+... .++ + | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++
T Consensus 306 ~gg~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l 385 (434)
T cd07133 306 ELNPAGEDFAATRKLPPTLVLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRT 385 (434)
T ss_pred ecCCCCcCCCCCcEEeeEEEeCCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhC
Confidence 233321 133 3 5 2 36889999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEEcCCcC--cCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 487 DSAAVFHNASTR--FCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 487 ~~G~V~VN~~~~--~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
++|.|+||++.. ..+..||||.+.||+|. ++|.+|+++||+.|+|+
T Consensus 386 ~~G~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~ft~~k~v~ 433 (434)
T cd07133 386 HSGGVTINDTLLHVAQDDLPFGGVGASGMGA----YHGKEGFLTFSHAKPVF 433 (434)
T ss_pred CcceEEECCcccccCCCCCCcCCCCcccCCC----cCCHHHHHHhcccceec
Confidence 999999998753 23668999999999863 56999999999999984
No 95
>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like. Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.
Probab=100.00 E-value=5.7e-73 Score=614.23 Aligned_cols=395 Identities=20% Similarity=0.223 Sum_probs=336.4
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
++.+|+.++++...+ .+|+++++++|++||+ .|+++|.++|.++|++++++|.++.++|++++++|.+++.
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~a~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~- 75 (457)
T cd07114 3 NPATGEPWARVPEAS------AADVDRAVAAARAAFEGGAWRKLTPTERGKLLRRLADLIEANAEELAELETRDNGKLI- 75 (457)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHcCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-
Confidence 467899999988887 8899999999999997 5999999999999999999999999999998766554332
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.+ ...++..+++.+++++...+. .+...+. ...+...+++|+|+|||++|+|| ||. +.++++++
T Consensus 76 ---~~--------~~~ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~ 142 (457)
T cd07114 76 ---RE--------TRAQVRYLAEWYRYYAGLADKIEGAVIPV--DKGDYLNFTRREPLGVVAAITPWNSPLLLLAKKLAP 142 (457)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHHhcCccccc--CCCCceEEEEEecceEEEEECCCccHHHHHHHHHHH
Confidence 11 124677777788877643322 1221111 01234567889999999999998 785 56899999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||+.+|+++..+++++.+ + +|+|+||+|++ +.++++.|..|+++++|+||||+.+|+.+++.+
T Consensus 143 AL~aGN~Vilkps~~~p~~~~~l~~~l~~----aglP~~vv~~v~g~~~~~~~~l~~~~~i~~V~ftGs~~~g~~v~~~a 218 (457)
T cd07114 143 ALAAGNTVVLKPSEHTPASTLELAKLAEE----AGFPPGVVNVVTGFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA 218 (457)
T ss_pred HHhcCCeEEeECCccchHHHHHHHHHHHH----cCcCCCcEEEEeCCCchHHHHHhcCCCCCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 566788888899999999999999999999887
Q ss_pred C---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC-------
Q 008588 347 K---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG------- 415 (560)
Q Consensus 347 ~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~------- 415 (560)
+ ||+++|||||||+||++|||++.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|++++++++
T Consensus 219 a~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~-~~f~~~l~~~~~~~~~g~p~~~ 297 (457)
T cd07114 219 AENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIY-DEFVERLVARARAIRVGDPLDP 297 (457)
T ss_pred HhcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCC
Confidence 3 8999999999999999999999999999999999887 999999999999999 699999999987652
Q ss_pred ---------------------------CeE-ecCccc------cc-cc-c-C-----CCCCcccccccCceEEEEEeCCH
Q 008588 416 ---------------------------VGL-FGGPRA------SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 416 ---------------------------~~~-~g~~~~------~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
.++ +|+.+. .+ ++ | | +++.+++||+||||++|++|+|+
T Consensus 298 ~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~ 377 (457)
T cd07114 298 ETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQEEVFGPVLSVIPFDDE 377 (457)
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhhhcCCcCceEEEeccCCH
Confidence 222 344322 12 33 5 2 36889999999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
||||+++|+++|||++||||+|.+.++++++++++|+|+||+.....+..||||.++||+|. ++|.+|+++||+.|
T Consensus 378 deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~k~SG~G~----~~g~~~~~~f~~~k 453 (457)
T cd07114 378 EEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYRALSPSSPFGGFKDSGIGR----ENGIEAIREYTQTK 453 (457)
T ss_pred HHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCCCCccCcCCc----cchHHHHHHHhcee
Confidence 99999999999999999999999999999999999999999877666778999999998763 56999999999999
Q ss_pred EEEE
Q 008588 534 WILR 537 (560)
Q Consensus 534 ~v~~ 537 (560)
++++
T Consensus 454 ~~~~ 457 (457)
T cd07114 454 SVWI 457 (457)
T ss_pred EEeC
Confidence 9863
No 96
>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1. Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.
Probab=100.00 E-value=2.6e-72 Score=609.02 Aligned_cols=397 Identities=19% Similarity=0.262 Sum_probs=332.2
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEA 192 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~ 192 (560)
.++.+|+.++++...+ .+++++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++.+|++++..
T Consensus 4 ~~P~tg~~~~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~- 76 (453)
T cd07149 4 ISPYDGEVIGRVPVAS------EEDVEKAIAAAKEGAKEMKSLPAYERAEILERAAQLLEERREEFARTIALEAGKPIK- 76 (453)
T ss_pred cCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHH-
Confidence 3567888888888777 889999999999999999999999999999999999999999999988777655432
Q ss_pred chhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccccc--CCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 193 GYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 193 g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
++ ..|+...++.++++++..+ ..++..+.... ..+...+.+++|+|||++|+|| ||. +.+++++
T Consensus 77 ---~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~ 145 (453)
T cd07149 77 ---DA--------RKEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAITPFNFPLNLVAHKVG 145 (453)
T ss_pred ---HH--------HHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEeecceEEEEECCCCChHHHHHHHHH
Confidence 21 1345555555555443221 11221111000 1123457889999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||+.+|+++.++.+++++ + +|+|++|+|++ +.+++..|..||++|+|+||||+++|+.|++.
T Consensus 146 ~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~----ag~P~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i~~~ 221 (453)
T cd07149 146 PAIAAGNAVVLKPASQTPLSALKLAELLLE----AGLPKGALNVVTGSGETVGDALVTDPRVRMISFTGSPAVGEAIARK 221 (453)
T ss_pred HHHHcCCEEEEECCCcchHHHHHHHHHHHH----cCcCccceEEeecCchHHHHHHhcCCCCCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 55668888889999999999999999999988
Q ss_pred cC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------
Q 008588 346 TK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------- 416 (560)
Q Consensus 346 a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------- 416 (560)
+. +|+++|||||||+||++|||++.|++.+++++|.|+| .|++++|+|||+++| |+|+++|+++++++.+
T Consensus 222 a~~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-d~f~~~L~~~~~~~~~g~p~~~~ 300 (453)
T cd07149 222 AGLKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIY-DEFLERFVAATKKLVVGDPLDED 300 (453)
T ss_pred cCCCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHH-HHHHHHHHHHHHhCCcCCCCCCC
Confidence 75 8999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred ---------------------------eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHH
Q 008588 417 ---------------------------GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIH 461 (560)
Q Consensus 417 ---------------------------~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN 461 (560)
++ .|+.....++ | | +++.+++||+||||++|++|+|+||||+++|
T Consensus 301 ~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n 380 (453)
T cd07149 301 TDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLTDVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMAN 380 (453)
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEeCCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHh
Confidence 11 1222211223 5 2 3578999999999999999999999999999
Q ss_pred hcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 462 QHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 462 ~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++|||++||||+|.++++++++++++|.|+||+++.. .+..||||.|.||+|. ++|.+|+++||+.|+|+
T Consensus 381 ~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~~pfGG~~~SG~G~----~~g~~~~~~~~~~k~~~ 452 (453)
T cd07149 381 DSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSSTFRVDHMPYGGVKESGTGR----EGPRYAIEEMTEIKLVC 452 (453)
T ss_pred CCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCCCCCCCCCCcCCccccccCC----CChHHHHHHhhceeEEe
Confidence 99999999999999999999999999999999987644 4568999999999873 56999999999999986
No 97
>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like. N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
Probab=100.00 E-value=1e-72 Score=606.54 Aligned_cols=374 Identities=17% Similarity=0.142 Sum_probs=311.6
Q ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHH
Q 008588 137 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 216 (560)
Q Consensus 137 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~ 216 (560)
|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++.. ++ ..|+..++..+
T Consensus 1 ~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----ea--------~~ev~~~~~~~ 68 (431)
T cd07095 1 QVDAAVAAARAAFPGWAALSLEERAAILRRFAELLKANKEELARLISRETGKPLW----EA--------QTEVAAMAGKI 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999998877655421 22 13555555555
Q ss_pred HHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHH
Q 008588 217 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 293 (560)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~ 293 (560)
++++.... ..+..... ..+...+++++|+|||++|+|| ||. ++++++++||++||+||+|||+.+|+++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~ 145 (431)
T cd07095 69 DISIKAYHERTGERATP---MAQGRAVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVE 145 (431)
T ss_pred HHHHHHHHHhcCCcccC---CCCceEEEEEecceEEEEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHH
Confidence 55443221 11211111 1233567889999999999998 796 567999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc----CCCEEEecCccceEEEcCCCCH
Q 008588 294 VITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST----KIPVLGHADGICHVYVDKSANL 368 (560)
Q Consensus 294 l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a----~~~~~lElGGk~p~iV~~dADl 368 (560)
++.+ + +|+|++|+|+++.+.++.|..||+||+|+||||+++|+.|++++ .+|++||||||||+||++|||+
T Consensus 146 ~~~~----ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl 221 (431)
T cd07095 146 LWEE----AGLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADI 221 (431)
T ss_pred HHHH----hCcChhHheEEeCcHHHHHHHhcCCCCCEEEEECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCH
Confidence 9987 6 99999999997556788888999999999999999999998874 2789999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC-cccccceEEEeCc-cCCcchHHHHHHHHHhcCC------------------------------
Q 008588 369 DVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV------------------------------ 416 (560)
Q Consensus 369 d~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~-i~dd~f~~~l~~~~~~~~~------------------------------ 416 (560)
|.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+++++++++
T Consensus 222 ~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~-d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~ 300 (431)
T cd07095 222 DAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVG-DAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLL 300 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchH-HHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHH
Confidence 9999999999999987 9999999999999 99 6999999999987642
Q ss_pred ----eE-ecCccc--cc-cc-c-C----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 008588 417 ----GL-FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 482 (560)
Q Consensus 417 ----~~-~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~ 482 (560)
++ .|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|..+++++
T Consensus 301 ~~ga~~l~gg~~~~~~g~~~~Ptv~~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~ 380 (431)
T cd07095 301 ALGGEPLLAMERLVAGTAFLSPGIIDVTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERF 380 (431)
T ss_pred hcCCEEEeCCCcCCCCCeEEcCEEEecCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHH
Confidence 11 122211 13 33 5 2 3589999999999999999999999999999999999999999999999999
Q ss_pred HhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 483 LCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 483 ~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
++++++|+|+||+++.. ....||||.|.||+|. .+|++|+++| +.|++
T Consensus 381 ~~~l~~G~v~iN~~~~~~~~~~PfGG~k~SG~G~----~~g~~~~~~~-~~~~~ 429 (431)
T cd07095 381 LARIRAGIVNWNRPTTGASSTAPFGGVGLSGNHR----PSAYYAADYC-AYPVA 429 (431)
T ss_pred HHhCCcceEEECCCCCCCCCCCCCCCcccccCCC----CChHHHHHHH-hhhhc
Confidence 99999999999986543 3457999999999863 5689999954 44543
No 98
>PRK15398 aldehyde dehydrogenase EutE; Provisional
Probab=100.00 E-value=2.2e-72 Score=606.25 Aligned_cols=378 Identities=18% Similarity=0.208 Sum_probs=306.9
Q ss_pred chhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHH
Q 008588 134 KQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 213 (560)
Q Consensus 134 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~ 213 (560)
..+|+++++++|++||++|++++.++|.++|+++++.|++|.++|++++++|++++. .++.. ..+.+.+
T Consensus 34 ~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~----~ea~~-------~~~~~~~ 102 (465)
T PRK15398 34 VFASVDDAVAAAKVAQQRYQQKSLAMRQRIIDAIREALLPHAEELAELAVEETGMGR----VEDKI-------AKNVAAA 102 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc----HHHHH-------HHHHHHH
Confidence 378999999999999999999999999999999999999999999999877665431 22211 1122222
Q ss_pred HHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHH
Q 008588 214 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 291 (560)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l 291 (560)
..++ +.....+.... ..+...+++++|+|||++|+|| ||. +.++++++||++||+||+|||+.||+|+..+
T Consensus 103 ~~~~---~~~~~~~~~~~----~~~~~~~v~~~P~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l 175 (465)
T PRK15398 103 EKTP---GVEDLTTEALT----GDNGLTLIEYAPFGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRA 175 (465)
T ss_pred HHhc---cccccccCccc----CCCceeEEEecccEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHH
Confidence 2111 00000011110 1122457788999999999998 796 5689999999999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHH
Q 008588 292 HKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLD 369 (560)
Q Consensus 292 ~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld 369 (560)
++++++++.++ +|+|++|+|++ +.++++.|..||+||+|+||||+++|+.|++ +.+|+++|||||||+||++|||||
T Consensus 176 ~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGS~~~G~~v~~-~~k~~~~elGGk~p~IV~~dADld 254 (465)
T PRK15398 176 IELLNEAIVAAGGPENLVVTVAEPTIETAQRLMKHPGIALLVVTGGPAVVKAAMK-SGKKAIGAGAGNPPVVVDETADIE 254 (465)
T ss_pred HHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHcCCCccEEEeeCCHHHHHHHHH-cCCceeeecCCCceEEEecCCCHH
Confidence 99999988888 99999999996 5567777888999999999999999999988 679999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHH------------HHhc----C--C-eE-ecCcc-----
Q 008588 370 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE------------LQHE----G--V-GL-FGGPR----- 423 (560)
Q Consensus 370 ~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~------------~~~~----~--~-~~-~g~~~----- 423 (560)
.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|+++ +.++ + . ++ .|+..
T Consensus 255 ~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si~-d~f~~~l~~~~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~ 333 (465)
T PRK15398 255 KAARDIVKGASFDNNLPCIAEKEVIVVDSVA-DELMRLMEKNGAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILE 333 (465)
T ss_pred HHHHHHHHhcccCCCCcCCCCceEEEeHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHH
Confidence 999999999999987 999999999999999 6999999883 2111 1 0 11 22221
Q ss_pred -ccccc----c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCc--eeEEEecCHHHHHHHHhhcCeee
Q 008588 424 -ASKLL----Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAH--TDCIVAEDQKVAETFLCQVDSAA 490 (560)
Q Consensus 424 -~~~~~----p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL--~a~I~t~d~~~a~~~~~~l~~G~ 490 (560)
...++ | | ++|++++||+||||++|++|+|+||||+++|+++||| ++||||+|.+++++|++++++|+
T Consensus 334 ~~G~~~~~~~~tvl~~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~ 413 (465)
T PRK15398 334 AAGINVPKDTRLLIVETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSI 413 (465)
T ss_pred hCCCCCCCCCCEEEecCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceE
Confidence 01222 3 2 3689999999999999999999999999999999998 99999999999999999999999
Q ss_pred EEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 491 VFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 491 V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
|+||.++. ..+||||.+.| .++.+|+.| ...|..|++.++.
T Consensus 414 V~iN~~~~--~~~p~gg~~~s-----~~~~~~~~g-~~~~~~~~~~~~~ 454 (465)
T PRK15398 414 FVKNGPSY--AGLGLGGEGFT-----TFTIATPTG-EGVTSARTFTRRR 454 (465)
T ss_pred EEECCCCc--cccCcCCCCCc-----eeeecccCC-CCccchhhhhhhe
Confidence 99998753 45788866544 345569999 9999999987643
No 99
>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like. In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.
Probab=100.00 E-value=3.5e-72 Score=608.08 Aligned_cols=395 Identities=19% Similarity=0.183 Sum_probs=333.5
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ .+|+++++++|++||+.|+++|.++|.++|++++++|++|.++|++++++|++++..
T Consensus 3 ~P~t~~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-- 74 (455)
T cd07093 3 NPATGEVLAKVPEGG------AAEVDAAVAAAKEAFPGWSRMSPAERARILHKVADLIEARADELALLESLDTGKPIT-- 74 (455)
T ss_pred CCCCCCEEEEEcCCC------HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--
Confidence 456888889887777 899999999999999999999999999999999999999999999998877654421
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~AL 270 (560)
++. ..|+...++.+++++.... ..+...+. ..+...+.+++|+|||++|+|| ||. ..++++++||
T Consensus 75 --~~~-------~~ev~~~i~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~AL 142 (455)
T cd07093 75 --LAR-------TRDIPRAAANFRFFADYILQLDGESYPQ---DGGALNYVLRQPVGVAGLITPWNLPLMLLTWKIAPAL 142 (455)
T ss_pred --HHH-------HHHHHHHHHHHHHHHHhHHHhCCccccC---CCCceEEEEEEeeeEEEEECCCChHHHHHHHHHHHHH
Confidence 111 1245556666665553221 11111111 1244567889999999999998 796 5689999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK- 347 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~- 347 (560)
++||+||+|||+.+|+++..+.+++++ + +|+|+||+|++ +.+++++|..|++||+|+||||+.+|+.|++++.
T Consensus 143 ~aGN~VIlkps~~~p~~~~~l~~~l~~----aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~ 218 (455)
T cd07093 143 AFGNTVVLKPSEWTPLTAWLLAELANE----AGLPPGVVNVVHGFGPEAGAALVAHPDVDLISFTGETATGRTIMRAAAP 218 (455)
T ss_pred hcCCEEEeECCCcCcHHHHHHHHHHHh----cCCCccceEEEecCchHHHHHHhcCCCccEEEEECCHHHHHHHHHHHhh
Confidence 999999999999999999999999986 7 99999999996 5667888888999999999999999999998874
Q ss_pred --CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 348 --IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 348 --~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
||+++|||||||+||++|||++.|++.+++++|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 219 ~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~p~~~~~ 297 (455)
T cd07093 219 NLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIY-DEFLERFVERAKALKVGDPLDPDT 297 (455)
T ss_pred cccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHH-HHHHHHHHHHHHhCCCCCCCCCCC
Confidence 9999999999999999999999999999999999977 999999999999999 6999999999876521
Q ss_pred --------------------------eE-ecCccc------ccc-c-c-C-----CCCCcccccccCceEEEEEeCCHHH
Q 008588 417 --------------------------GL-FGGPRA------SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRA 455 (560)
Q Consensus 417 --------------------------~~-~g~~~~------~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~de 455 (560)
++ +|+... .+. + | | +++.+++||+||||++|++|+|+||
T Consensus 298 ~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~E~fgPvl~v~~~~~~~e 377 (455)
T cd07093 298 EVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEIFGPVVTVIPFDDEEE 377 (455)
T ss_pred CcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhCCCCCceEEEEeeCCHHH
Confidence 11 233221 122 3 5 2 3578999999999999999999999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.+.||+|. ++|++|+++|++.|++
T Consensus 378 ai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~~ 453 (455)
T cd07093 378 AIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVRDLRTPFGGVKASGIGR----EGGDYSLEFYTELKNV 453 (455)
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCC----CchHHHHHHHhceeEE
Confidence 999999999999999999999999999999999999999987666678999999998863 5699999999999998
Q ss_pred EE
Q 008588 536 LR 537 (560)
Q Consensus 536 ~~ 537 (560)
++
T Consensus 454 ~~ 455 (455)
T cd07093 454 CI 455 (455)
T ss_pred eC
Confidence 63
No 100
>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11. NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.
Probab=100.00 E-value=4.8e-72 Score=609.51 Aligned_cols=400 Identities=21% Similarity=0.235 Sum_probs=334.8
Q ss_pred hhhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQAL-QSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 111 ~i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~-~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.+.++.+|+.++++...+ .+|+++++++|++||+.|+++ +.++|.++|++++++|++|.++|++++++|++++
T Consensus 19 ~~~~P~tg~~i~~~~~~~------~~~v~~av~~A~~A~~~w~~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~ 92 (473)
T cd07082 19 EVYSPIDGEVIGSVPALS------ALEILEAAETAYDAGRGWWPTMPLEERIDCLHKFADLLKENKEEVANLLMWEIGKT 92 (473)
T ss_pred eeECCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 345677899889888777 889999999999999999998 9999999999999999999999999998877655
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-ccccccccccc--CCCeeEEEeecceEEEEEEcCC-Chh-hHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTEL--ADGLILEKTSCPLGVLLIVFES-RPD-ALVQ 264 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~ 264 (560)
.. ++. .|+...++.++++++..+ ..+...+.... ..+...+.+|+|+|||++|+|| +|. +..+
T Consensus 93 ~~----~a~--------~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~N~P~~~~~~ 160 (473)
T cd07082 93 LK----DAL--------KEVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRREPLGVVLAIGPFNYPLNLTVS 160 (473)
T ss_pred HH----HHH--------HHHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEecceEEEEECCcCcHHHHHHH
Confidence 42 211 244445555555443221 11221111100 1234567889999999999998 686 5689
Q ss_pred HHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHH
Q 008588 265 IASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQI 342 (560)
Q Consensus 265 ~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i 342 (560)
++++||++||+||+|||+.+|.++.++.+++.+ + +|+|++|++++ +.++++.|..|+++|+|+||||+++|+.|
T Consensus 161 ~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~----aglp~~~~~vv~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~i 236 (473)
T cd07082 161 KLIPALIMGNTVVFKPATQGVLLGIPLAEAFHD----AGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRL 236 (473)
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHH----cCCCccceEEEecCcHHHHHHHhcCCCCCEEEEECcHHHHHHH
Confidence 999999999999999999999999999999987 6 99999999995 55678888889999999999999999999
Q ss_pred HHhc-CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCe---
Q 008588 343 KEST-KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG--- 417 (560)
Q Consensus 343 ~~~a-~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~--- 417 (560)
++.+ .+|+++|||||||+||++|||+|.|++.+++++|.|+| .|+|++|||||+++| |+|+++|.++++++.+.
T Consensus 237 ~~~a~~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-d~f~~~l~~~~~~~~~g~~~ 315 (473)
T cd07082 237 KKQHPMKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVA-DELVELLKEEVAKLKVGMPW 315 (473)
T ss_pred HHHhCCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHH-HHHHHHHHHHHhcCCCCCCC
Confidence 9887 59999999999999999999999999999999999988 999999999999999 69999999999876321
Q ss_pred -------------------------------E-ecCccccccc--c-C-----CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 418 -------------------------------L-FGGPRASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 418 -------------------------------~-~g~~~~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
+ .|+....++| | | +++++++||+||||++|++|+|+||||
T Consensus 316 ~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai 395 (473)
T cd07082 316 DNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLDPVTPDMRLAWEEPFGPVLPIIRVNDIEEAI 395 (473)
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEecCCCCCHHHhCcCcCceEEEEEeCCHHHHH
Confidence 1 1222221322 5 2 357899999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++|+++|||++||||+|.++++++++++++|+|+||+++... +..||||.+.||+|+ ++|.+|+++||+.|+|+
T Consensus 396 ~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~~pfGG~k~SG~g~----~~g~~~l~~~~~~k~i~ 471 (473)
T cd07082 396 ELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQRGPDHFPFLGRKDSGIGT----QGIGDALRSMTRRKGIV 471 (473)
T ss_pred HHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCcccccccCC----CChHHHHHHhhceeEEE
Confidence 9999999999999999999999999999999999999876443 467999999999873 56999999999999997
Q ss_pred E
Q 008588 537 R 537 (560)
Q Consensus 537 ~ 537 (560)
+
T Consensus 472 ~ 472 (473)
T cd07082 472 I 472 (473)
T ss_pred E
Confidence 5
No 101
>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.
Probab=100.00 E-value=4.8e-72 Score=605.39 Aligned_cols=379 Identities=16% Similarity=0.164 Sum_probs=317.3
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHH--hhCCHHHH----HHHHHHHHHHHHHc--HHHHHHHHHH
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRL--QALQSQDR----RKILLDVADALEAN--ESLIKVENEA 184 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w--~~~~~~~R----~~~L~~~a~~l~~~--~~el~~~~~~ 184 (560)
.++.+|+.++++...+ .+|+++|+++|++||+.| +.++..+| .++|++++++|++| .++|++++++
T Consensus 17 ~nP~t~~~i~~~~~a~------~~dv~~Av~aA~~A~~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~ 90 (489)
T cd07126 17 LDPLNGDKFISVPDTD------EDEINEFVDSLRQCPKSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQR 90 (489)
T ss_pred eCCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4678899999988887 899999999999999998 56779999 89999999999999 5999999876
Q ss_pred HHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-h
Q 008588 185 DVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-A 261 (560)
Q Consensus 185 ~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~ 261 (560)
|+||+. .++ ..|+..+++.+++|++..+ ..+..........+...+++|+|+|||++|+|| ||. +
T Consensus 91 e~GK~~----~~a--------~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l 158 (489)
T cd07126 91 VAPKSD----AQA--------LGEVVVTRKFLENFAGDQVRFLARSFNVPGDHQGQQSSGYRWPYGPVAIITPFNFPLEI 158 (489)
T ss_pred HcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCceeccCCCCCCceeEEEEecceEEEEECCCchHHHH
Confidence 655432 122 3588899999999986542 223221100011234568899999999999998 696 6
Q ss_pred HHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHH
Q 008588 262 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 339 (560)
Q Consensus 262 ~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G 339 (560)
.+++++|||++||+||+||||.||+|+.+|++++.+ + ||+|+||+|+| +++.+. +..|++||+|+||||+++|
T Consensus 159 ~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~----aGlP~gv~~vv~G~~~~~~~-l~~~~~v~~V~FTGS~~vG 233 (489)
T cd07126 159 PALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHL----CGMPATDVDLIHSDGPTMNK-ILLEANPRMTLFTGSSKVA 233 (489)
T ss_pred HHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHH----hCcCcCcEEEEeCCchhHHH-HhcCCCCCEEEEECCHHHH
Confidence 789999999999999999999999999999999987 6 99999999996 555555 4568899999999999999
Q ss_pred HHHHHhcCCCEEEecCccceEEEcCCC-CHHHHHHHHHhhcCCCCC-cccccceEEEeCc-cCCcchHHHHHHHHHhcC-
Q 008588 340 SQIKESTKIPVLGHADGICHVYVDKSA-NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEG- 415 (560)
Q Consensus 340 ~~i~~~a~~~~~lElGGk~p~iV~~dA-Dld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~-i~dd~f~~~l~~~~~~~~- 415 (560)
|+|+..+++++++|+|||||+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ ++ |+|+++|++.++++.
T Consensus 234 r~i~~~~g~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C~a~~rv~V~~~i~~-d~f~~~l~~~~~~~~~ 312 (489)
T cd07126 234 ERLALELHGKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQ-AGILDKLKALAEQRKL 312 (489)
T ss_pred HHHHHHhCCCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcCCCCceEEEeCcchH-HHHHHHHHHHHHhccc
Confidence 999988888999999999999999999 999999999999999987 9999999999999 57 599999999876542
Q ss_pred ----------------------------CeE-ecCccc------c--ccc-c--C--C--------CCCcccccccCceE
Q 008588 416 ----------------------------VGL-FGGPRA------S--KLL-Q--I--P--------ETRLFHHEYNSMVC 445 (560)
Q Consensus 416 ----------------------------~~~-~g~~~~------~--~~~-p--v--~--------~~~~~~eE~FGPVl 445 (560)
+++ +||... . +++ | + + +|.+++||+||||+
T Consensus 313 g~~~~Gpli~~~~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl 392 (489)
T cd07126 313 EDLTIGPVLTWTTERILDHVDKLLAIPGAKVLFGGKPLTNHSIPSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQ 392 (489)
T ss_pred CCCcCCCCcCHHHHHHHHHHHHHHhCCCCEEEeCCcccccccccCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEE
Confidence 122 244321 1 234 5 2 1 47899999999999
Q ss_pred EEEEeCC--HHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeee--EEEcCCcCcCCC----CccCCccceeccc
Q 008588 446 TVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAA--VFHNASTRFCDG----ARFGLGAEVGIST 515 (560)
Q Consensus 446 ~v~~~~~--~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~--V~VN~~~~~~~~----~pfG~g~~sG~~~ 515 (560)
+|++|+| +||||+++|+++|||++||||+|.++++++++++++|+ |+||+.+...+. .||||.|.||+|+
T Consensus 393 ~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~~G~~~v~~n~~~~~~~~~~~~~pfgg~k~sg~g~ 470 (489)
T cd07126 393 VVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTVNGTTYAGIRARTTGAPQNHWFGPAGDPRGAGIGT 470 (489)
T ss_pred EEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEEEecCCCCCCCcccCcCCCCCCcccCCCC
Confidence 9999999 99999999999999999999999999999999999999 668887655443 8999999998864
No 102
>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins. ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.
Probab=100.00 E-value=5.5e-72 Score=602.82 Aligned_cols=378 Identities=21% Similarity=0.239 Sum_probs=318.2
Q ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHH
Q 008588 137 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSI 216 (560)
Q Consensus 137 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~ 216 (560)
|+++++++|++||+.|+++|.++|.++|+++++.|++|.++|++++++|++++.. ++ ..|+..+++.+
T Consensus 1 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~----~~--------~~ei~~~~~~l 68 (431)
T cd07104 1 DVDRAYAAAAAAQKAWAATPPQERAAILRKAAEILEERRDEIADWLIRESGSTRP----KA--------AFEVGAAIAIL 68 (431)
T ss_pred CHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999998877654321 21 13566677777
Q ss_pred HHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHH-HHHHH
Q 008588 217 RILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRS-NAILH 292 (560)
Q Consensus 217 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t-~~~l~ 292 (560)
+++++..+ ..+...+.. ..+...+.+++|+|||++|+|| ||. ..++++++||++||+||+|||+.+|.+ +..+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~ 146 (431)
T cd07104 69 REAAGLPRRPEGEILPSD--VPGKESMVRRVPLGVVGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIA 146 (431)
T ss_pred HHHHHHHHHhcCccccCC--CCCceeEEEEeeeeeEEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHH
Confidence 77654322 222222211 1244567889999999999998 796 567999999999999999999999998 56788
Q ss_pred HHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCC
Q 008588 293 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSAN 367 (560)
Q Consensus 293 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dAD 367 (560)
+++.+ + +|+|++|+|++ +.++++.|..||++|+|+||||+.+|+.|+++++ +|+++|||||||+||++|||
T Consensus 147 ~~l~~----aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~V~ftGs~~~g~~v~~~aa~~~~~~~lelgG~~~~iV~~dad 222 (431)
T cd07104 147 EIFEE----AGLPKGVLNVVPGGGSEIGDALVEHPRVRMISFTGSTAVGRHIGELAGRHLKKVALELGGNNPLIVLDDAD 222 (431)
T ss_pred HHHHH----cCCCcccEEEeeCCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHhhcCCcEEEEcCCCCeEEECCCCC
Confidence 88876 7 99999999995 5567888888999999999999999999998774 89999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC------------------------------
Q 008588 368 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------------ 416 (560)
Q Consensus 368 ld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------------ 416 (560)
+|.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++.+
T Consensus 223 l~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~ 301 (431)
T cd07104 223 LDLAVSAAAFGAFLHQGQICMAAGRILVHESVY-DEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAV 301 (431)
T ss_pred HHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHH-HHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH
Confidence 99999999999999887 999999999999999 6999999999887632
Q ss_pred ----eE-ecCccccccc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHh
Q 008588 417 ----GL-FGGPRASKLL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC 484 (560)
Q Consensus 417 ----~~-~g~~~~~~~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~ 484 (560)
++ +|+.....++ | | +++++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++
T Consensus 302 ~~G~~~~~gg~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~ 381 (431)
T cd07104 302 AAGARLLTGGTYEGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAE 381 (431)
T ss_pred HCCCEEEeCCCCCCceECCEEeecCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHH
Confidence 11 1222211123 5 2 357899999999999999999999999999999999999999999999999999
Q ss_pred hcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 485 QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 485 ~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
++++|.|+||+++... +..||||.+.||+| +++|++|+++||+.|+|++
T Consensus 382 ~l~~g~v~iN~~~~~~~~~~pfgG~~~SG~g----~~~g~~~l~~~~~~k~~~~ 431 (431)
T cd07104 382 RLETGMVHINDQTVNDEPHVPFGGVKASGGG----RFGGPASLEEFTEWQWITV 431 (431)
T ss_pred hcCcCeEEECCCCCCCCCCCCCCCcccccCC----ccchHHHHHHhhceeEEeC
Confidence 9999999999986543 56899999999865 2569999999999999863
No 103
>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like. Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.
Probab=100.00 E-value=4.9e-72 Score=606.44 Aligned_cols=394 Identities=18% Similarity=0.199 Sum_probs=334.7
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhc
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAG 193 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g 193 (560)
++.+|+.++++...+ ++|+++++++|++||+.|+++|.++|.++|+++++.|+++.++|++++..|++++..
T Consensus 3 ~P~tg~~i~~~~~~~------~~~v~~av~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~-- 74 (451)
T cd07103 3 NPATGEVIGEVPDAG------AADADAAIDAAAAAFKTWRKTTARERAAILRRWADLIRERAEDLARLLTLEQGKPLA-- 74 (451)
T ss_pred CCCCCCEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--
Confidence 467888899987777 899999999999999999999999999999999999999999999988777654421
Q ss_pred hhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHH
Q 008588 194 YAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAI 270 (560)
Q Consensus 194 ~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~AL 270 (560)
++ ..|+...++.+++++...+ ..+...+.. ..+...+.+++|+|||++|+|| ||.+ .++++++||
T Consensus 75 --~a--------~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL 142 (451)
T cd07103 75 --EA--------RGEVDYAASFLEWFAEEARRIYGRTIPSP--APGKRILVIKQPVGVVAAITPWNFPAAMITRKIAPAL 142 (451)
T ss_pred --HH--------HHHHHHHHHHHHHHHHHHHHhcCcccccC--CCCcceEEEEeeceEEEEECCCchHHHHHHHHHHHHH
Confidence 22 2356666677766654322 223222211 1234567889999999999997 7964 578999999
Q ss_pred HhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc--
Q 008588 271 RSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST-- 346 (560)
Q Consensus 271 aaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a-- 346 (560)
++||+||+|||+.+|.++..+.+++++ + +|+|++|+|++ +.+.++.|..|++||+|+||||+.+|+.|++.+
T Consensus 143 ~aGN~VIlKps~~~~~~~~~l~~~l~~----aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V~ftGs~~~g~~v~~~aa~ 218 (451)
T cd07103 143 AAGCTVVLKPAEETPLSALALAELAEE----AGLPAGVLNVVTGSPAEIGEALCASPRVRKISFTGSTAVGKLLMAQAAD 218 (451)
T ss_pred HcCCEEEEECCccCcHHHHHHHHHHHH----cCCCcccEEEEecCchhHHHHHhcCCCCCEEEEECCHHHHHHHHHHHHh
Confidence 999999999999999999999999987 6 99999999996 556778788899999999999999999998877
Q ss_pred -CCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--------
Q 008588 347 -KIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-------- 416 (560)
Q Consensus 347 -~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-------- 416 (560)
.+|+++|||||||+||++|||++.|++.+++|+|.|+| .|++++|||||+++| |+|+++|+++++++++
T Consensus 219 ~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~-~~f~~~l~~~~~~~~~g~~~~~~~ 297 (451)
T cd07103 219 TVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIY-DEFVEKLVERVKKLKVGNGLDEGT 297 (451)
T ss_pred cCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHH-HHHHHHHHHHHHhccCCCCCCCCC
Confidence 38999999999999999999999999999999999987 999999999999999 6999999999886532
Q ss_pred --------------------------eE-ecCccc--cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHH
Q 008588 417 --------------------------GL-FGGPRA--SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDH 459 (560)
Q Consensus 417 --------------------------~~-~g~~~~--~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~ 459 (560)
++ +|+... .+ ++ | | +++.+++||+||||++|++|+|+||||++
T Consensus 298 ~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~ 377 (451)
T cd07103 298 DMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVAPIIPFDTEDEVIAR 377 (451)
T ss_pred CCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCCCceEEEEEECCHHHHHHH
Confidence 11 133221 23 33 5 2 35789999999999999999999999999
Q ss_pred HHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 460 IHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 460 aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+|+++|||+++|||+|.++++++++++++|.|+||+++...+..||||.++||+|. ++|++|+++||+.|+++
T Consensus 378 ~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~~pfgG~~~SG~G~----~~g~~~~~~~~~~k~v~ 450 (451)
T cd07103 378 ANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLISDAEAPFGGVKESGLGR----EGGKEGLEEYLETKYVS 450 (451)
T ss_pred HhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCccCcCCc----cchHHHHHHHhceeEEe
Confidence 99999999999999999999999999999999999987666678999999998763 56999999999999985
No 104
>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain). This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.
Probab=100.00 E-value=5.9e-72 Score=609.05 Aligned_cols=385 Identities=17% Similarity=0.191 Sum_probs=327.6
Q ss_pred hhhhhhcC-CceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLEG-KRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 111 ~i~~~~~G-~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.+.++.++ +.++++...+ ++||++|+++|++||+.|+++|..+|.++|++++++|++|.++|++++++|+++.
T Consensus 54 ~~~nP~t~~e~i~~~~~~~------~~dv~~av~~A~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 127 (500)
T TIGR01238 54 PVTNPADRRDIVGQVFHAN------LAHVQAAIDSAQQAFPTWNATPAKERAAKLDRLADLLELHMPELMALCVREAGKT 127 (500)
T ss_pred EeeCCCCCCeEEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCC
Confidence 44577775 6888888777 8999999999999999999999999999999999999999999999987766543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
. .++ ..|+..+++.++++++..+. .. + ...++|+|||++|+|| ||. +.+++++
T Consensus 128 ~----~~a--------~~ev~~~i~~l~~~a~~~~~---~~-------~---~~~~~P~GVV~~I~pwN~P~~~~~~~i~ 182 (500)
T TIGR01238 128 I----HNA--------IAEVREAVDFCRYYAKQVRD---VL-------G---EFSVESRGVFVCISPWNFPLAIFTGQIS 182 (500)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHH---hc-------C---ceeccCcceEEEECCCchHHHHHHHHHH
Confidence 2 122 24788888888888753210 00 1 1358999999999998 796 5689999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+|||++||+++..+.+++.+ + +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|++.
T Consensus 183 ~ALaaGN~VVlKps~~tp~~~~~l~~~~~~----aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v~~~ 258 (500)
T TIGR01238 183 AALAAGNTVIAKPAEQTSLIAYRAVELMQE----AGFPAGTIQLLPGRGADVGAALTSDPRIAGVAFTGSTEVAQLINQT 258 (500)
T ss_pred HHHHcCCEEEEeCCCCccHHHHHHHHHHHH----cCCCCCceEEEecCcchHHHHHhcCCCcCeEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 55678888899999999999999999999987
Q ss_pred cC------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC--
Q 008588 346 TK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-- 416 (560)
Q Consensus 346 a~------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-- 416 (560)
++ +|+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|||||+++| |+|+++|+++++++++
T Consensus 259 aa~~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~~~vG~ 337 (500)
T TIGR01238 259 LAQREDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVA-DRVLTMIQGAMQELKVGV 337 (500)
T ss_pred HhhcccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhH-HHHHHHHHHHHHhCCCCC
Confidence 63 6999999999999999999999999999999999987 999999999999999 6999999999887632
Q ss_pred --------------------------------eEe----cCcc--cccc-c-c-C---CCCCcccccccCceEEEEEeC-
Q 008588 417 --------------------------------GLF----GGPR--ASKL-L-Q-I---PETRLFHHEYNSMVCTVEIVD- 451 (560)
Q Consensus 417 --------------------------------~~~----g~~~--~~~~-~-p-v---~~~~~~~eE~FGPVl~v~~~~- 451 (560)
++. ++.+ ..++ + | | ++|.+++||+||||++|++|+
T Consensus 338 p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~~~~~~~~eE~FgPvl~v~~~~~ 417 (500)
T TIGR01238 338 PHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFELDDIAELSEEVFGPVLHVVRYKA 417 (500)
T ss_pred CCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEccCCchHhhCCCcCCEEEEEEeCC
Confidence 111 1100 1132 3 5 3 367889999999999999998
Q ss_pred -CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhc
Q 008588 452 -DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEG 528 (560)
Q Consensus 452 -~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ 528 (560)
++||||+++|+++|||++||||+|.+++++|++++++|+|+||+..... ...||||.+.||+|. +.+|++++++
T Consensus 418 ~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~~~~~~~~PfGG~k~SG~G~---~~gg~~~~~~ 494 (500)
T TIGR01238 418 RELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQVGAVVGVQPFGGQGLSGTGP---KAGGPHYLYR 494 (500)
T ss_pred CCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCccccccCCC---ccCCHHHHHH
Confidence 7999999999999999999999999999999999999999999876432 346999999998862 2468999999
Q ss_pred ceEEEE
Q 008588 529 LLTTRW 534 (560)
Q Consensus 529 ft~~K~ 534 (560)
|++.|+
T Consensus 495 ~~~~k~ 500 (500)
T TIGR01238 495 LTQVQY 500 (500)
T ss_pred HHhhcC
Confidence 999874
No 105
>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase. The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.
Probab=100.00 E-value=6.9e-72 Score=608.64 Aligned_cols=392 Identities=17% Similarity=0.192 Sum_probs=319.8
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHH-HHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++.+|+.++++.. . .+|+++|+++|++| |+.|+++|..+|+++|++++++|++|.++|+++ +.|.+++.
T Consensus 20 ~nP~tg~~~~~~~~-~------~~dv~~Av~~A~~A~~~~W~~~~~~~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~- 90 (513)
T cd07128 20 HDAVTGEVVARVSS-E------GLDFAAAVAYAREKGGPALRALTFHERAAMLKALAKYLMERKEDLYAL-SAATGATR- 90 (513)
T ss_pred ECCCCCCEEEEEcC-C------HHHHHHHHHHHHHhhhchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCH-
Confidence 46678888888764 3 46999999999998 799999999999999999999999999999985 65554332
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-c--------cccccccccCCCeeEEEeecc-eEEEEEEcCC-Chh
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-I--------GQILKRTELADGLILEKTSCP-LGVLLIVFES-RPD 260 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~P-lGVV~~I~p~-~P~ 260 (560)
.++ ..|+...++.++++++..+. . ++..+.. .......+++++| +|||++|+|| ||.
T Consensus 91 ---~ea--------~~Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~~GVv~~I~pwN~P~ 158 (513)
T cd07128 91 ---RDS--------WIDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLS-KDGTFVGQHILTPRRGVAVHINAFNFPV 158 (513)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHhhccccccccCCcccccC-CCccccceEEEEecccEEEEECCcccHH
Confidence 122 23667777777777654321 1 1211110 0011134577999 5999999998 796
Q ss_pred -hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHH
Q 008588 261 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNK 337 (560)
Q Consensus 261 -~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~ 337 (560)
+.+++++|||++||+||+|||+.||+++.++++++.++ . +|+|+||+|++ +..+++.| +.+|+|+||||++
T Consensus 159 ~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~ea---G~lP~gv~~~v~g~~~~~~~~l---~~~d~v~fTGS~~ 232 (513)
T cd07128 159 WGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVES---GLLPEGALQLICGSVGDLLDHL---GEQDVVAFTGSAA 232 (513)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHh---CCCCCCcEEEecCChHHHhccc---CCCCEEEEECCHH
Confidence 56899999999999999999999999999999999873 3 79999999996 33344433 4689999999999
Q ss_pred HHHHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHH
Q 008588 338 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 406 (560)
Q Consensus 338 ~G~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~ 406 (560)
+|++|++.+ .+|++||||||||+||++||| +|.|++.+++++|.|+| +|++++|+|||+++| |+|+++
T Consensus 233 ~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~ 311 (513)
T cd07128 233 TAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARV-DAVIEA 311 (513)
T ss_pred HHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccCCceEEEehHHH-HHHHHH
Confidence 999999864 389999999999999999999 99999999999999987 999999999999999 699999
Q ss_pred HHHHHHhcCC---------------------------------eE-ecCccc---------cc-cc-c-C-----C--CC
Q 008588 407 LVVELQHEGV---------------------------------GL-FGGPRA---------SK-LL-Q-I-----P--ET 433 (560)
Q Consensus 407 l~~~~~~~~~---------------------------------~~-~g~~~~---------~~-~~-p-v-----~--~~ 433 (560)
|+++++++.+ ++ +|+... .+ |+ | | + .+
T Consensus 312 l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 391 (513)
T cd07128 312 LKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVGADAEKGAFFPPTLLLCDDPDAAT 391 (513)
T ss_pred HHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccCCCCCCCEEECCEEEeccCCcccc
Confidence 9999987631 11 344321 23 33 6 2 2 26
Q ss_pred CcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcC--eeeEEEcCCcC---------cCCC
Q 008588 434 RLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR---------FCDG 502 (560)
Q Consensus 434 ~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~--~G~V~VN~~~~---------~~~~ 502 (560)
.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+++++++++++ +|+||||+... ..+.
T Consensus 392 ~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~IN~~~~~~~~~~~~~~~~~ 471 (513)
T cd07128 392 AVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLVLNRDSAKESTGHGSPLPQ 471 (513)
T ss_pred hHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEEcCCccccccccccCCCCC
Confidence 789999999999999999999999999999999999999999999999999997 99999998641 1346
Q ss_pred CccCCccceeccccCccc-ccccchhcceEEEEEE
Q 008588 503 ARFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWIL 536 (560)
Q Consensus 503 ~pfG~g~~sG~~~~~~~~-~G~~gl~~ft~~K~v~ 536 (560)
+||||.|.||+|+ + +|.+|+++|++.|+|.
T Consensus 472 ~pfGG~k~SG~G~----~~gg~~~l~~~~~~k~v~ 502 (513)
T cd07128 472 LVHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQ 502 (513)
T ss_pred CCCCCcccCCCCc----ccccHHHHHHhheeeeee
Confidence 7999999998873 3 3689999999999975
No 106
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=100.00 E-value=1.2e-71 Score=622.88 Aligned_cols=396 Identities=17% Similarity=0.167 Sum_probs=323.4
Q ss_pred hhhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHH-HHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 112 IIKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 112 i~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
+.++.+|+.++.+...+ .||++|+++|++| |+.|+++|..+|+++|++++++|++|.++|++ +++|.||+.
T Consensus 19 v~nP~tg~~i~~~~~~~-------~dv~~Av~~A~~aa~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~ 90 (663)
T TIGR02278 19 VRDASTGEVLARVTSEG-------LDVAAAVAWAREVGGPALRALTFHERARMLKALAQYLSERKEALYA-LAATTGATR 90 (663)
T ss_pred ccCCCCCCEEEEEcCCc-------HHHHHHHHHHHHhcchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCH
Confidence 35677888888866554 3899999999996 99999999999999999999999999999998 455543331
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhccccc---------ccccccccccCCCeeEEEeecce-EEEEEEcCC-Ch
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP---------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RP 259 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P 259 (560)
.++ ..|+..+++.++++++..+. .|+..+.. ...+...+++|+|+ |||++|+|| ||
T Consensus 91 ----~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~P~~Gvv~~I~pwN~P 157 (663)
T TIGR02278 91 ----RDN--------WVDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLS-KDGSFQGRHILTPKGGVAVQINAFNFP 157 (663)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHhhhhhccccccccCCceeccC-CCCccceEEEEEeCCceEEEEcCCchH
Confidence 121 24778888888888764321 12222211 01122457889998 999999998 69
Q ss_pred h-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHH
Q 008588 260 D-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNK 337 (560)
Q Consensus 260 ~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~ 337 (560)
+ +..++++|||++||+||+|||+.||+++.++++++.++ . +|+|+||+|++. .+.++..++++|+|+||||++
T Consensus 158 ~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~a---G~lP~gv~~~v~g~--~~~~~~~~~~~~~V~FTGS~~ 232 (663)
T TIGR02278 158 VWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVES---GLLPEGSLQLICGS--AGDLLDHLDHRDVVAFTGSAA 232 (663)
T ss_pred HHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHh---CCCCCCcEEEEeCC--hHHHHhcCCCCCEEEEECCHH
Confidence 6 56899999999999999999999999999999999874 4 899999999963 233444446789999999999
Q ss_pred HHHHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHH
Q 008588 338 LVSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNE 406 (560)
Q Consensus 338 ~G~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~ 406 (560)
+|++|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| +|+|++|||||+++| |+|+++
T Consensus 233 ~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~ 311 (663)
T TIGR02278 233 TADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAIRRVIVPKALL-EAVLKA 311 (663)
T ss_pred HHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCCceEEEeHHHH-HHHHHH
Confidence 999999853 389999999999999999999 99999999999999987 999999999999999 699999
Q ss_pred HHHHHHhcCC----------------------------------eE-ecCccc-ccc-c-c-C-----CCC-Cccccccc
Q 008588 407 LVVELQHEGV----------------------------------GL-FGGPRA-SKL-L-Q-I-----PET-RLFHHEYN 441 (560)
Q Consensus 407 l~~~~~~~~~----------------------------------~~-~g~~~~-~~~-~-p-v-----~~~-~~~~eE~F 441 (560)
|+++++++++ ++ +||... .++ + | | ++| .+++||+|
T Consensus 312 l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~~g~~~~PTvl~~~~~~~~~i~~eE~F 391 (663)
T TIGR02278 312 LQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAF 391 (663)
T ss_pred HHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCeeEccEEEeeCCcchhhHHhcccc
Confidence 9999987632 12 244322 233 3 6 2 244 68999999
Q ss_pred CceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhc--CeeeEEE-cCCc-------Cc-CCCCccCCccc
Q 008588 442 SMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFH-NAST-------RF-CDGARFGLGAE 510 (560)
Q Consensus 442 GPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l--~~G~V~V-N~~~-------~~-~~~~pfG~g~~ 510 (560)
|||++|++|+|+||||+++|+++|||++||||+|..++++++++| ++|+||| |.+. .. .+.+||||.|.
T Consensus 392 GPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~~~~~~~~~~~~~~~~~pfGG~k~ 471 (663)
T TIGR02278 392 GPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNRDDAAESTGHGSPLPRLLHGGPGR 471 (663)
T ss_pred CCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCCcccccccCCCCCCCCCCCCCCcc
Confidence 999999999999999999999999999999999999999999999 8999999 6421 11 24579999999
Q ss_pred eeccccCccc-ccccchhcceEEEEEEEc
Q 008588 511 VGISTSRIHA-RGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 511 sG~~~~~~~~-~G~~gl~~ft~~K~v~~~ 538 (560)
||+|. + +|.+++++|++.|+|..-
T Consensus 472 SG~G~----~~g~~~~l~~f~~~k~v~~~ 496 (663)
T TIGR02278 472 AGGGE----ELGGLRSVKHYMQRTAIQGS 496 (663)
T ss_pred CcCCC----ccchHHHHHHhceeEEEEcC
Confidence 99873 3 357999999999999764
No 107
>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins. Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=5.9e-71 Score=590.68 Aligned_cols=381 Identities=16% Similarity=0.179 Sum_probs=298.4
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH--H
Q 008588 138 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK--S 215 (560)
Q Consensus 138 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~--~ 215 (560)
+++|+++|++||+.|+++|+.+|.++|++++++|++|.++|++++++|.|++. .++.. ++...+. .
T Consensus 1 ~~~Ai~~A~~A~~~W~~~~~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~----~ea~~--------~~~~~~~~~~ 68 (439)
T cd07081 1 LDDAVAAAKVAQQGLSCKSQEMVDLIFRAAAEAAEDARIDLAKLAVSETGMGR----VEDKV--------IKNHFAAEYI 68 (439)
T ss_pred CHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh----HHHHH--------HHHHHHHHHH
Confidence 47899999999999999999999999999999999999999999887776542 22211 1222222 1
Q ss_pred HHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHH
Q 008588 216 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 293 (560)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~ 293 (560)
.++++.. ..+...+. ..+...+++|+|+|||++|+|| ||. +.+++++|||++||+||+||||+||+++.++++
T Consensus 69 ~~~~~~~--~~~~~~~~---~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~ 143 (439)
T cd07081 69 YNVYKDE--KTCGVLTG---DENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAAT 143 (439)
T ss_pred HHHHhcc--ccCceecC---CCCCceEEEEecceEEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHH
Confidence 2333321 11222111 1123457889999999999998 796 568999999999999999999999999999999
Q ss_pred HHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHH
Q 008588 294 VITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVA 371 (560)
Q Consensus 294 l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~A 371 (560)
++.+++.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++.+..++ ..||+++|||||||+||++|||+|.|
T Consensus 144 l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~~V~~V~FTGs~~v~~~aa~-~~k~~~lElGGk~p~IV~~dADl~~A 222 (439)
T cd07081 144 LLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFPGIGLLLATGGPAVVKAAYS-SGKPAIGVGAGNTPVVIDETADIKRA 222 (439)
T ss_pred HHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCCCCCEEEEECCHHHHHHHHh-cCCCEEEEcCCCCeEEEcCCCCHHHH
Confidence 999988889 99999999996 6667888889999999999999997665432 36899999999999999999999999
Q ss_pred HHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh-------------------cCCeEecCcc-----ccc
Q 008588 372 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH-------------------EGVGLFGGPR-----ASK 426 (560)
Q Consensus 372 a~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~-------------------~~~~~~g~~~-----~~~ 426 (560)
++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|++++.- .|..+.|+.. ..+
T Consensus 223 a~~iv~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G 301 (439)
T cd07081 223 VQSIVKSKTFDNGVICASEQSVIVVDSVY-DEVMRLFEGQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAG 301 (439)
T ss_pred HHHHHHHHhcCCCCCCCCCCEEEEcHHHH-HHHHHHHHHcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcC
Confidence 9999999999987 999999999999999 6999999886411 1333444321 012
Q ss_pred cc--c----C-------CCCCcccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEecC---HHHHHHHHhhc
Q 008588 427 LL--Q----I-------PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAED---QKVAETFLCQV 486 (560)
Q Consensus 427 ~~--p----v-------~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~I~t~d---~~~a~~~~~~l 486 (560)
++ | + ++|.+++||+||||++|++|+|+||||+++|++ +|||+++|||+| .++++++++++
T Consensus 302 ~~~~pt~~~i~~~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l 381 (439)
T cd07081 302 LKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAM 381 (439)
T ss_pred CccCCCceEEEEecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhC
Confidence 22 3 1 368999999999999999999999999999976 799999999999 99999999999
Q ss_pred CeeeEEEcCCcCcC---CCCccCCccceeccccCccccc---ccchhcceEEEEEEE
Q 008588 487 DSAAVFHNASTRFC---DGARFGLGAEVGISTSRIHARG---PVGVEGLLTTRWILR 537 (560)
Q Consensus 487 ~~G~V~VN~~~~~~---~~~pfG~g~~sG~~~~~~~~~G---~~gl~~ft~~K~v~~ 537 (560)
++|+|+||.++... ...-||+...+-+|.+..+..+ .-+.++|+++|.|.+
T Consensus 382 ~~G~V~iN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (439)
T cd07081 382 KTSRFVKNGPCSQGGLGDLYNFRGWPSMTLGCGTWGGNSVSENVGPKHLVNLKTVAL 438 (439)
T ss_pred CceEEEEeCCccccccccccCCCCCeeEeeecCCCCCCCcCCCCChHhhheeeeeec
Confidence 99999999766321 1122444443333322111112 246889999998864
No 108
>PRK11903 aldehyde dehydrogenase; Provisional
Probab=100.00 E-value=6.4e-71 Score=602.67 Aligned_cols=397 Identities=16% Similarity=0.159 Sum_probs=322.9
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESS-RRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~-~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++.+|+.++++.. + .+||++|+++|++|| +.|+++|..+|+++|++++++|++|.++|+++++.|.|++.
T Consensus 24 ~nP~tge~l~~v~~-~------~~dv~~Av~aA~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~- 95 (521)
T PRK11903 24 FDPVTGEELVRVSA-T------GLDLAAAFAFAREQGGAALRALTYAQRAALLAAIVKVLQANRDAYYDIATANSGTTR- 95 (521)
T ss_pred ECCCCCCEEEEecC-C------hHHHHHHHHHHHHhhhhhhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-
Confidence 45678888888764 5 789999999999995 99999999999999999999999999999998876654432
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccc-c-c----cCCCeeEEEeecc-eEEEEEEcCC-Chh-h
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKR-T-E----LADGLILEKTSCP-LGVLLIVFES-RPD-A 261 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~-~-~----~~~~~~~~~~~~P-lGVV~~I~p~-~P~-~ 261 (560)
.++ ..|+..+++.+++++.+.+. .+..... . . .......+..|+| +|||++|+|| ||. +
T Consensus 96 ---~~a--------~~ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~GVv~~I~pwN~P~~~ 164 (521)
T PRK11903 96 ---NDS--------AVDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFNFPAWG 164 (521)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccceEEEecCcceEEEECCcchHHHH
Confidence 121 34777888888887754321 1111100 0 0 0011223567899 6999999998 696 5
Q ss_pred HHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHH
Q 008588 262 LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLV 339 (560)
Q Consensus 262 ~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G 339 (560)
..++++|||++||+||+|||+.||.++..+++++.++ . ||+|+||+|+| ++++++.| +++|+|+||||+++|
T Consensus 165 ~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~a---g~lP~gv~~~v~g~~~~~~~~l---~~v~~v~fTGS~~~G 238 (521)
T PRK11903 165 LWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAA---GILPAGALSVVCGSSAGLLDHL---QPFDVVSFTGSAETA 238 (521)
T ss_pred HHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHh---CCCCcCceEEeeCCchHHHhcc---cCCCEEEEECCHHHH
Confidence 6789999999999999999999999999999999873 4 89999999996 55555544 689999999999999
Q ss_pred HHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHH
Q 008588 340 SQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELV 408 (560)
Q Consensus 340 ~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~ 408 (560)
++|++.+ .+|++||||||||+||++||| +|.|++.+++|+|.|+| +|++++|+|||+++| |+|+++|+
T Consensus 239 ~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~~rv~V~~~i~-d~f~~~L~ 317 (521)
T PRK11903 239 AVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAIRRIFVPEALY-DAVAEALA 317 (521)
T ss_pred HHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCCeEEEEehhHH-HHHHHHHH
Confidence 9999853 389999999999999999999 59999999999999988 999999999999999 69999999
Q ss_pred HHHHhcCC---------------------------------eE-ecCccc--------cc-cc-c-C-----C--CCCcc
Q 008588 409 VELQHEGV---------------------------------GL-FGGPRA--------SK-LL-Q-I-----P--ETRLF 436 (560)
Q Consensus 409 ~~~~~~~~---------------------------------~~-~g~~~~--------~~-~~-p-v-----~--~~~~~ 436 (560)
++++++.+ ++ +|+.+. .+ ++ | | + ++.++
T Consensus 318 ~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~~~~~g~~~~PTvl~~~~~~~~~~i~ 397 (521)
T PRK11903 318 ARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDADPAVAACVGPTLLGASDPDAATAVH 397 (521)
T ss_pred HHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCCCCCCCeEEcCEEEeccCCCccchHH
Confidence 99987632 12 244321 13 33 6 2 1 25788
Q ss_pred cccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhc--CeeeEEEcCCcC---------cCCCCcc
Q 008588 437 HHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV--DSAAVFHNASTR---------FCDGARF 505 (560)
Q Consensus 437 ~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l--~~G~V~VN~~~~---------~~~~~pf 505 (560)
+||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++ ++|+|+||+++. ..+.+||
T Consensus 398 ~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~~~~~~~~~~~~~~~~~~Pf 477 (521)
T PRK11903 398 DVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVISPDVAALHTGHGNVMPQSLH 477 (521)
T ss_pred hCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcCcccccccccCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999 999999997532 2346799
Q ss_pred CCccceeccccCcccccccchhcceEEEEEEEc
Q 008588 506 GLGAEVGISTSRIHARGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 506 G~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~ 538 (560)
||.|.||+|+. .+|.+++++||+.|+|...
T Consensus 478 GG~k~SG~Gr~---~g~~~~l~~~t~~~~~~~~ 507 (521)
T PRK11903 478 GGPGRAGGGEE---LGGLRALAFYHRRSAVQAS 507 (521)
T ss_pred CCCCcCcCCcc---cccHHHHHHHhccceeeCC
Confidence 99999998631 1357999999998877544
No 109
>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like. Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.
Probab=100.00 E-value=1.1e-70 Score=591.07 Aligned_cols=378 Identities=19% Similarity=0.216 Sum_probs=308.5
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+++++|++||+.|+++|..+|.++|++++++|++|.+||+++++.|+++... ++...++.....++++.+..++.+
T Consensus 2 ~~~~~a~~a~~~W~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~----ea~~~ev~~~~~~~~~~~~~~~~~ 77 (433)
T cd07134 2 RVFAAQQAHALALRASTAAERIAKLKRLKKAILARREEIIAALAADFRKPAA----EVDLTEILPVLSEINHAIKHLKKW 77 (433)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999887765432 221122222223333333333222
Q ss_pred hcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHH
Q 008588 220 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 297 (560)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~ 297 (560)
.+. ...+......+...+++|+|+|||++|+|| ||. +..++++|||++||+||+|||+.+|.++.++++++++
T Consensus 78 ~~~-----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~ 152 (433)
T cd07134 78 MKP-----KRVRTPLLLFGTKSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIRE 152 (433)
T ss_pred hCC-----cccCCccccCCCceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH
Confidence 110 001000001233457889999999999998 796 5679999999999999999999999999999999986
Q ss_pred hcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHHHH
Q 008588 298 AIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNI 374 (560)
Q Consensus 298 al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~ 374 (560)
++|+|++|+++++.+.+..|.+|+ +++|+||||+.+|+.|++.+. +|+++|||||||+||++|||++.|++.
T Consensus 153 ----a~p~g~v~~v~g~~~~~~~l~~~~-v~~v~ftGs~~~g~~i~~~aa~~~~~~~lelgG~~~~iV~~dAD~~~aa~~ 227 (433)
T cd07134 153 ----AFDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAAAKHLASVTLELGGKSPTIVDETADLKKAAKK 227 (433)
T ss_pred ----hCCcCEEEEEeCChhHHHHHHhCC-CCEEEEECChHHHHHHHHHHHhcCCcEEEEccCCCcEEECCCCCHHHHHHH
Confidence 499999999997555677777787 999999999999999998773 899999999999999999999999999
Q ss_pred HHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-----------------------------------eE
Q 008588 375 VIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV-----------------------------------GL 418 (560)
Q Consensus 375 iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~-----------------------------------~~ 418 (560)
+++|+|.|+| .|++++|+|||+++| |+|+++|+++++++.. ++
T Consensus 228 i~~~~~~~~GQ~C~a~~rv~V~~~v~-d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~ 306 (433)
T cd07134 228 IAWGKFLNAGQTCIAPDYVFVHESVK-DAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKV 306 (433)
T ss_pred HHHHhhcCcCCcccCCcEEEECHHHH-HHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEE
Confidence 9999999987 999999999999999 6999999998886411 01
Q ss_pred -ecCccc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCe
Q 008588 419 -FGGPRA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 488 (560)
Q Consensus 419 -~g~~~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~ 488 (560)
+|+... .+ ++ | | ++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++
T Consensus 307 ~~gg~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~ 386 (433)
T cd07134 307 EFGGQFDAAQRYIAPTVLTNVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSS 386 (433)
T ss_pred EeCCCcCCCCCEEeeEEEeCCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCc
Confidence 122111 12 22 5 2 3578999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 489 AAVFHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 489 G~V~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
|.||||+.+.. .+..||||.+.||+|. ++|++|+++||+.|+|.
T Consensus 387 g~v~iN~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~i~ 432 (433)
T cd07134 387 GGVVVNDVVLHFLNPNLPFGGVNNSGIGS----YHGVYGFKAFSHERAVL 432 (433)
T ss_pred ceEEECCcccccCCCCCCCCCcCcccCCC----cCcHHHHHHhcccceee
Confidence 99999987543 3568999999999863 56999999999999985
No 110
>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=2.2e-70 Score=633.15 Aligned_cols=428 Identities=19% Similarity=0.183 Sum_probs=351.1
Q ss_pred HHHHHHHHHHHHCC---CcEEEEeCC-CCchhhhhhcCC-ceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHH
Q 008588 85 TAKVNAAYCAACAG---IPVVITSGF-AMDSIIKVLEGK-RVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQD 159 (560)
Q Consensus 85 ~~K~~aa~~~~~~g---i~v~I~~g~-~~~~i~~~~~G~-~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~ 159 (560)
..++.++....+.. .+.+| +|. ....+.++.+++ .+|++..++ ++|+++|+++|++||+.|+++|.++
T Consensus 536 ~~~~~~al~~~~~~~~~~~~~i-~g~~~~~~v~nP~~~~~~vg~v~~a~------~~~v~~Ai~aA~~A~~~W~~~~~~~ 608 (1038)
T PRK11904 536 LEPLAAAIAAFLEKQWQAGPII-NGEGEARPVVSPADRRRVVGEVAFAD------AEQVEQALAAARAAFPAWSRTPVEE 608 (1038)
T ss_pred HHHHHHHHHHHHhcCceecceE-cCCCCeEEEECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHhccCCHHH
Confidence 44555555555432 23333 651 122445677766 789988888 8999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCC
Q 008588 160 RRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADG 238 (560)
Q Consensus 160 R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 238 (560)
|+++|++++++|+++.++|+.++++|.||+. .++ ..|+..+++.+++|+...+ ..+...... ...+
T Consensus 609 Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~----~~a--------~~EV~eaid~lr~ya~~a~~~~~~~~~l~-g~~g 675 (1038)
T PRK11904 609 RAAILERAADLLEANRAELIALCVREAGKTL----QDA--------IAEVREAVDFCRYYAAQARRLFGAPEKLP-GPTG 675 (1038)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhhCCCcccC-CCCC
Confidence 9999999999999999999999877665432 222 3478888888888875432 222211100 1124
Q ss_pred eeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-C
Q 008588 239 LILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-R 314 (560)
Q Consensus 239 ~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~ 314 (560)
...+.+++|+|||++|+|| ||. +..+++++||++||+||+|||++||+++..+.+++++ + +|+|++|+|+| +
T Consensus 676 e~n~~~~~P~GVv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~e----AGlP~gvl~lv~G~g 751 (1038)
T PRK11904 676 ESNELRLHGRGVFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHE----AGIPKDVLQLLPGDG 751 (1038)
T ss_pred ceeEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHH----hCcCcceEEEeeCCc
Confidence 4567889999999999998 796 5679999999999999999999999999999999987 6 99999999996 6
Q ss_pred chhhHhhcCCCCccEEEeecCHHHHHHHHHhcC------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-ccc
Q 008588 315 EEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACN 387 (560)
Q Consensus 315 ~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~ 387 (560)
+++++.|..||+|++|+||||+++|+.|+++++ +|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+
T Consensus 752 ~~vg~~Lv~~p~v~~V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~Cs 831 (1038)
T PRK11904 752 ATVGAALTADPRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCS 831 (1038)
T ss_pred hHHHHHHhcCCCcCeEEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccc
Confidence 668898999999999999999999999987652 6999999999999999999999999999999999987 999
Q ss_pred ccceEEEeCccCCcchHHHHHHHHHhcCCe----------------------------------EecCccc----cccc-
Q 008588 388 AMETLLVHKDLACNGALNELVVELQHEGVG----------------------------------LFGGPRA----SKLL- 428 (560)
Q Consensus 388 a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~----------------------------------~~g~~~~----~~~~- 428 (560)
|.+|+|||++|| |+|+++|+++++++++. +.|+... .++|
T Consensus 832 A~~rl~V~~si~-d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G~fv 910 (1038)
T PRK11904 832 ALRVLFVQEDIA-DRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENGHFV 910 (1038)
T ss_pred cCcEEEEeHHHH-HHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCceEE
Confidence 999999999999 69999999999876421 1233221 1333
Q ss_pred -c-C---CCCCcccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC-
Q 008588 429 -Q-I---PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC- 500 (560)
Q Consensus 429 -p-v---~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~- 500 (560)
| | +++.+++||+||||++|++|+ ++||||+++|+++|||++||||+|.++++++++++++|+||||+.+...
T Consensus 911 ~PTvi~~~~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga~ 990 (1038)
T PRK11904 911 APTAFEIDSISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGAV 990 (1038)
T ss_pred eeEEEccCCcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccCC
Confidence 6 3 457789999999999999998 7999999999999999999999999999999999999999999876543
Q ss_pred -CCCccCCccceeccccCcccccccchhcceEEEEEEEcCc
Q 008588 501 -DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNG 540 (560)
Q Consensus 501 -~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~ 540 (560)
...||||.+.||.|. +.+|++++++|++.|+|+++..
T Consensus 991 vg~qPFGG~~~SG~G~---kaGG~~~L~~f~~~ktv~~~~~ 1028 (1038)
T PRK11904 991 VGVQPFGGQGLSGTGP---KAGGPHYLLRFATEKTVTVNTT 1028 (1038)
T ss_pred CCCCCCCCCCCCCCCC---ccchHHHHHHHhceEEEEEccc
Confidence 346999999888752 3568999999999999988643
No 111
>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins. ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.
Probab=100.00 E-value=1.2e-70 Score=590.26 Aligned_cols=376 Identities=22% Similarity=0.245 Sum_probs=308.5
Q ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHH
Q 008588 140 EMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRIL 219 (560)
Q Consensus 140 ~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~ 219 (560)
+++++|++||+.|+++|..+|.++|++++++|++|.+||+++++.|++++. .++.. .|+...++.++++
T Consensus 2 ~~v~~a~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~----~~~~~-------~Ev~~~~~~~~~~ 70 (426)
T cd07087 2 ELVARLRETFLTGKTRSLEWRKAQLKALKRMLTENEEEIAAALYADLGKPP----AEAYL-------TEIAVVLGEIDHA 70 (426)
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH----HHHHH-------HHHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999999887765542 12221 2444444444444
Q ss_pred hcccc-ccccc-ccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 220 ADMEE-PIGQI-LKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 220 ~~~~~-~~~~~-~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
+...+ ..+.. ........+...+.+++|+|||++|+|| +|. +..++++|||++||+||+|||+.+|+++.++++++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~ 150 (426)
T cd07087 71 LKHLKKWMKPRRVSVPLLLQPAKAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLI 150 (426)
T ss_pred HHHHHHHhCCcccCCccccCCCceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHH
Confidence 32211 10100 0000001122457789999999999998 796 57899999999999999999999999999999999
Q ss_pred HHhcccccCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCCHHHHH
Q 008588 296 TSAIPDTVGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSANLDVAK 372 (560)
Q Consensus 296 ~~al~~alP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a---~~~~~lElGGk~p~iV~~dADld~Aa 372 (560)
.+ ++|+|++|+|+++.+.+..|..|| +|+|+||||+++|+.|++.+ .||+++|||||||+||++|||+|.|+
T Consensus 151 ~~----~~P~gv~~vv~g~~~~~~~l~~~~-v~~V~ftGs~~~g~~i~~~a~~~~~~~~lelgG~~~~iV~~dadl~~aa 225 (426)
T cd07087 151 PK----YFDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAAAKHLTPVTLELGGKSPCIVDKDANLEVAA 225 (426)
T ss_pred HH----hCCCCEEEEEeCCchHHHHHHhCC-CCEEEEeCChHHHHHHHHHHHhhCCceEEeccCCCceEecCCCCHHHHH
Confidence 86 499999999996445567677788 99999999999999998877 38999999999999999999999999
Q ss_pred HHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC----------------------------e-EecCc
Q 008588 373 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV----------------------------G-LFGGP 422 (560)
Q Consensus 373 ~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~----------------------------~-~~g~~ 422 (560)
+.+++++|.|+| .|+|++|+|||+++| |+|+++|++.++++.. + ++||.
T Consensus 226 ~~i~~~~~~~~GQ~C~a~~rv~V~~~i~-d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~ 304 (426)
T cd07087 226 RRIAWGKFLNAGQTCIAPDYVLVHESIK-DELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQ 304 (426)
T ss_pred HHHHHHHHhccCCccccCCEEEEcHHHH-HHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCc
Confidence 999999999987 999999999999999 6999999999876521 0 12332
Q ss_pred cc-cc-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEE
Q 008588 423 RA-SK-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFH 493 (560)
Q Consensus 423 ~~-~~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~V 493 (560)
.. .+ ++ | | ++|++++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+|
T Consensus 305 ~~~~g~~~~Ptvl~~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~i 384 (426)
T cd07087 305 VDKEERYIAPTILDDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCV 384 (426)
T ss_pred cCCCCCEEeeEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEE
Confidence 21 12 33 5 2 358899999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 494 NASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 494 N~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
|++... .+..||||.|.||+|. ++|.+|+++||+.|+++
T Consensus 385 N~~~~~~~~~~~PfGG~k~SG~G~----~~g~~~l~~~~~~k~~~ 425 (426)
T cd07087 385 NDVLLHAAIPNLPFGGVGNSGMGA----YHGKAGFDTFSHLKSVL 425 (426)
T ss_pred CCcccccCCCCCCCCCCCcccCCC----ccCHHHHHHhccceeec
Confidence 987532 3678999999999863 56899999999999875
No 112
>PRK10090 aldehyde dehydrogenase A; Provisional
Probab=100.00 E-value=1.1e-70 Score=585.59 Aligned_cols=353 Identities=19% Similarity=0.197 Sum_probs=298.4
Q ss_pred HHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhccccc-ccccccccccCCCeeEE
Q 008588 164 LLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEP-IGQILKRTELADGLILE 242 (560)
Q Consensus 164 L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (560)
|++++++|++|+++|++++++|+++.. .++ ..|+..+++.+++++.+.+. .+...+. ...+...+
T Consensus 1 L~~~a~~l~~~~~el~~~~~~e~Gk~~----~ea--------~~Ev~~~~~~~~~~a~~~~~~~~~~~~~--~~~~~~~~ 66 (409)
T PRK10090 1 LRKIAAGIRERASEISALIVEEGGKIQ----QLA--------EVEVAFTADYIDYMAEWARRYEGEIIQS--DRPGENIL 66 (409)
T ss_pred CHHHHHHHHHCHHHHHHHHHHhcCCCH----HHH--------HHHHHHHHHHHHHHHHHHHHhcCcccCC--CCCCceeE
Confidence 578999999999999999887765542 222 23667777777777655432 2222111 11233567
Q ss_pred EeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-Cchhh
Q 008588 243 KTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIP 318 (560)
Q Consensus 243 ~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~ 318 (560)
++|+|+|||++|+|| ||. +.++++++||++||+||+|||+.+|.|+..+++++.+ + +|+|+||+|++ +.+++
T Consensus 67 ~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~----aglP~gv~~~v~g~~~~~~ 142 (409)
T PRK10090 67 LFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDE----IGLPKGVFNLVLGRGETVG 142 (409)
T ss_pred EEEecccEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHH----cCCCcccEEEEeCCChhHH
Confidence 889999999999998 796 5689999999999999999999999999999999987 6 99999999996 66788
Q ss_pred HhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEE
Q 008588 319 DLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLV 394 (560)
Q Consensus 319 ~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V 394 (560)
+.|..||+||+|+||||+++|+.|++++. ||+++|||||||+||++|||+|.|++.+++|+|.|+| .|+|++|+||
T Consensus 143 ~~l~~~~~v~~V~ftGs~~~g~~v~~~aa~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V 222 (409)
T PRK10090 143 QELAGNPKVAMVSMTGSVSAGEKIMAAAAKNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYV 222 (409)
T ss_pred HHHhcCCCcCEEEEECCHHHHHHHHHHHHhcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEE
Confidence 88889999999999999999999998773 8999999999999999999999999999999999887 9999999999
Q ss_pred eCccCCcchHHHHHHHHHhcCC-----------------------------------eE-ecCccc--cc-cc-c-C---
Q 008588 395 HKDLACNGALNELVVELQHEGV-----------------------------------GL-FGGPRA--SK-LL-Q-I--- 430 (560)
Q Consensus 395 ~~~i~dd~f~~~l~~~~~~~~~-----------------------------------~~-~g~~~~--~~-~~-p-v--- 430 (560)
|+++| |+|+++|+++++++.. ++ +|+.+. .+ ++ | |
T Consensus 223 ~~~i~-~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~ 301 (409)
T PRK10090 223 QKGIY-DQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLD 301 (409)
T ss_pred cHHHH-HHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeC
Confidence 99999 6999999999987631 11 133221 12 33 5 2
Q ss_pred --CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCc
Q 008588 431 --PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG 508 (560)
Q Consensus 431 --~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g 508 (560)
++|.+++||+||||++|++|+|+||||+++|+++|||++||||+|.++++++++++++|+|+||+........||||.
T Consensus 302 v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~pfGG~ 381 (409)
T PRK10090 302 VRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGW 381 (409)
T ss_pred CCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCc
Confidence 358999999999999999999999999999999999999999999999999999999999999998766666799999
Q ss_pred cceeccccCcccccccchhcceEEEEEEEcC
Q 008588 509 AEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 509 ~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
|+||+|+ ++|.+|+++||+.|++++.+
T Consensus 382 k~SG~G~----~~g~~gl~~f~~~k~v~~~~ 408 (409)
T PRK10090 382 RKSGIGG----ADGKHGLHEYLQTQVVYLQS 408 (409)
T ss_pred ccccCCc----cchHHHHHHhcceEEEEEec
Confidence 9999873 57999999999999998753
No 113
>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating).
Probab=100.00 E-value=1.1e-69 Score=588.64 Aligned_cols=382 Identities=19% Similarity=0.260 Sum_probs=310.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 214 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~ 214 (560)
.+|+++++++|++||+.|+++|.++|.++|++++++|++|+++|++...+|.+++ ... +++. +......
T Consensus 7 ~~~v~~av~~A~~A~~~w~~~s~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~------~~~-~~~~----~~~~~~~ 75 (488)
T TIGR02518 7 IQQVRNLIRSAKVAQKKLANMTQEQIDKIVKAIVDAAYENAVKLAKMANEETGFG------KWE-DKVI----KNVFAAT 75 (488)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCC------hHH-HHHH----HHHHHHH
Confidence 7899999999999999999999999999999999999999999999776555433 221 1110 1112233
Q ss_pred HHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHHHhCCeEEeeCCcchHHHHHHHH
Q 008588 215 SIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILH 292 (560)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~ 292 (560)
.+.+++...+..|.... +.+...+++++|+|||++|+|| ||+. ..+++++||++||+||+|||+.||.|+.+++
T Consensus 76 ~~~~~~~~~~~~G~~~~----~~~~~~~~~~~PlGVV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~ 151 (488)
T TIGR02518 76 IVYDSIKDMKTIGILSE----DKEKKVIEIAVPVGVVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETV 151 (488)
T ss_pred HHHHHHhhCcccceecC----CCCcceEEEEecceEEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHH
Confidence 33333322222342111 2344567889999999999998 7975 5789999999999999999999999999999
Q ss_pred HHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHH
Q 008588 293 KVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDV 370 (560)
Q Consensus 293 ~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~ 370 (560)
+++++++.++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.+ ....||+++|||||+|+||++|||+|+
T Consensus 152 ~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~~vd~V~fTGs~~v~~~a-~~~~~pv~~e~gGn~p~iV~~dADld~ 230 (488)
T TIGR02518 152 KLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNKDTSLILATGGEAMVKAA-YSSGTPAIGVGPGNGPAYIERTANVKK 230 (488)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCCCcCEEEEeCCHHHHHHH-HHcCCCEEEEcCCCCeEEEeCCCCHHH
Confidence 9999988889 99999999995 55667777788999999999999999888 456899999999999999999999999
Q ss_pred HHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHH-------HHhcCCe--Eec-----Cccc--------ccc
Q 008588 371 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVE-------LQHEGVG--LFG-----GPRA--------SKL 427 (560)
Q Consensus 371 Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~-------~~~~~~~--~~g-----~~~~--------~~~ 427 (560)
|++.+++|+|+|+| +|+|.+|+|||++|| |+|+++|+++ .+++.+. +.. ++.. ..+
T Consensus 231 Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~-d~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~ 309 (488)
T TIGR02518 231 AVRDIIDSKTFDNGTICASEQSIIVEECNK-DAVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANL 309 (488)
T ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEeHHHH-HHHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHH
Confidence 99999999999876 999999999999999 6999999887 5554321 000 0000 000
Q ss_pred c----c------------CC-CCCcccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEecCHHHHHHHHhhc
Q 008588 428 L----Q------------IP-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLCQV 486 (560)
Q Consensus 428 ~----p------------v~-~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~I~t~d~~~a~~~~~~l 486 (560)
+ + +. +++ ++||+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|++++
T Consensus 310 i~~av~~gakll~gg~~~v~~~~~-~~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i 388 (488)
T TIGR02518 310 AGLTVPEDAKVLIGEQNGVGNKNP-YSREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKK 388 (488)
T ss_pred hccccCCCCEEEEeCCCCCCCCCc-cccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhC
Confidence 0 1 11 344 589999999999999999999999998 699999999999999999999999
Q ss_pred CeeeEEEcC---------CcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 487 DSAAVFHNA---------STRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 487 ~~G~V~VN~---------~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
++|+|+||. ++.+.+++.||+|.+.|+|++ .+-|+++|++.|+|.++.
T Consensus 389 ~ag~V~VN~~~~~~~~Ga~t~~~~~~~~G~G~~~g~st~-----~~v~~~~l~~~k~v~~~~ 445 (488)
T TIGR02518 389 PVSRMLVNTGGSLGGIGATTNLVPAFTLGCGAVGGSSTS-----DNITPENLINIRRVAYGV 445 (488)
T ss_pred CeeEEEEcCCCcccccccccCCCccccccccccCCCcCC-----CCCCHHHhheeeEEEecc
Confidence 999999994 344566777899999888864 389999999999999876
No 114
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-70 Score=616.24 Aligned_cols=395 Identities=18% Similarity=0.197 Sum_probs=320.0
Q ss_pred hhhhcCCceeeEEecCCCcccchhhHHHHHHHHHHH-HHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHh
Q 008588 113 IKVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARES-SRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQE 191 (560)
Q Consensus 113 ~~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A-~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~ 191 (560)
.++.+|+.++++...+ +|+++|+++|++| |+.|+++|..+|+++|++++++|++|.++|++ ++.|++|+.
T Consensus 24 ~nP~tg~~i~~~~~~~-------~dv~~Av~~A~~A~~~~W~~~~~~eR~~~L~~~a~~l~~~~~ela~-l~~e~GK~~- 94 (675)
T PRK11563 24 HDAVTGEPVARVSSEG-------LDFAAALAYAREVGGPALRALTFHERAAMLKALAKYLLERKEELYA-LSAQTGATR- 94 (675)
T ss_pred cCCCCCCEEEEEcCCc-------HHHHHHHHHHHHhhhhhhhcCCHHHHHHHHHHHHHHHHHhHHHHHH-HHHHhCCCH-
Confidence 4667888888876543 4899999999998 79999999999999999999999999999997 455544331
Q ss_pred hchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-c--------ccccccccccCCCeeEEEeecce-EEEEEEcCC-Chh
Q 008588 192 AGYAKSLVSRLALKPGKISSLAKSIRILADMEE-P--------IGQILKRTELADGLILEKTSCPL-GVLLIVFES-RPD 260 (560)
Q Consensus 192 ~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~--------~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~-~P~ 260 (560)
.++ ..|+...++.+++++...+ . .|+..+.. .......+..++|+ |||++|+|| ||.
T Consensus 95 ---~~a--------~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~p~~GVv~~I~PwNfP~ 162 (675)
T PRK11563 95 ---RDS--------WIDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLS-KGGTFAGRHILTPLEGVAVHINAFNFPV 162 (675)
T ss_pred ---HHH--------HHHHHHHHHHHHHHHHHHhhhccccccccCCcccccc-CCCcccceEEEeecCceEEEECCCchHH
Confidence 122 2356667777777765331 1 12222210 01112246778997 999999998 696
Q ss_pred -hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHH
Q 008588 261 -ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKL 338 (560)
Q Consensus 261 -~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~ 338 (560)
+..++++|||++||+||+||||.||+++.++++++.++ . +|+|+||+|+|. .++++..++++++|+||||+++
T Consensus 163 ~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~ea---G~~P~gv~~vv~g~--~~~~~~~~~~i~~v~FTGS~~~ 237 (675)
T PRK11563 163 WGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVES---GLLPEGALQLICGS--AGDLLDHLDGQDVVTFTGSAAT 237 (675)
T ss_pred HHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHc---CCCCCCcEEEeeCC--HHHHhhcCCCCCEEEEECcHHH
Confidence 56899999999999999999999999999999999873 4 899999999963 2234544567999999999999
Q ss_pred HHHHHHhc-----CCCEEEecCccceEEEcCCCC-----HHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHH
Q 008588 339 VSQIKEST-----KIPVLGHADGICHVYVDKSAN-----LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNEL 407 (560)
Q Consensus 339 G~~i~~~a-----~~~~~lElGGk~p~iV~~dAD-----ld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l 407 (560)
|++|++.+ .+|++||||||||+||++||| ||.|++.+++|+|.|+| +|+|++|+|||++|| |+|+++|
T Consensus 238 G~~i~~~~~a~~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~-d~f~~~l 316 (675)
T PRK11563 238 AQKLRAHPNVVANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALV-DAVIEAL 316 (675)
T ss_pred HHHHHhhhhhhhCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccceeEEeeHHHH-HHHHHHH
Confidence 99998842 389999999999999999995 99999999999999987 999999999999999 6999999
Q ss_pred HHHHHhcCC---------------------------------e-EecCcc---------ccccc--c-C----CC---CC
Q 008588 408 VVELQHEGV---------------------------------G-LFGGPR---------ASKLL--Q-I----PE---TR 434 (560)
Q Consensus 408 ~~~~~~~~~---------------------------------~-~~g~~~---------~~~~~--p-v----~~---~~ 434 (560)
+++++++++ + ++|+.. ..++| | | +. +.
T Consensus 317 ~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g~f~~PTvl~~v~~~~~~~ 396 (675)
T PRK11563 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKGAFFPPTLLYCDDPLEAPA 396 (675)
T ss_pred HHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCCeeECCEEEeccCchhhhh
Confidence 999987632 1 134431 12433 6 3 22 47
Q ss_pred cccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcC--eeeEEEcCCcC--------c-CCCC
Q 008588 435 LFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVD--SAAVFHNASTR--------F-CDGA 503 (560)
Q Consensus 435 ~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~--~G~V~VN~~~~--------~-~~~~ 503 (560)
+++||+||||++|++|+|+||||+++|+++|||++||||+|..++++++++++ +|.||||+.+. . .+.+
T Consensus 397 i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~~~~~~~ 476 (675)
T PRK11563 397 VHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVLNRESAKESTGHGSPLPQL 476 (675)
T ss_pred HhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEcCccccccccCCCCCCcCC
Confidence 89999999999999999999999999999999999999999999999999997 99999997421 1 2467
Q ss_pred ccCCccceeccccCccc-ccccchhcceEEEEEEEc
Q 008588 504 RFGLGAEVGISTSRIHA-RGPVGVEGLLTTRWILRG 538 (560)
Q Consensus 504 pfG~g~~sG~~~~~~~~-~G~~gl~~ft~~K~v~~~ 538 (560)
||||.|.||+|+ + +|.+|+++|++.|+|..-
T Consensus 477 pfGG~k~SG~G~----~~~g~~~~~~f~~~k~~~~~ 508 (675)
T PRK11563 477 VHGGPGRAGGGE----ELGGLRGVKHYMQRTAVQGS 508 (675)
T ss_pred CcCCCCCCCCCc----cccchhHHHHhheeeeeecC
Confidence 999999999873 3 368999999999998653
No 115
>KOG2456 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.8e-70 Score=548.40 Aligned_cols=382 Identities=21% Similarity=0.241 Sum_probs=329.7
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHH
Q 008588 138 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 217 (560)
Q Consensus 138 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~ 217 (560)
+++.++++|.+|..-++.|.+.|.+.|+++...+++|+++|.+++.+|+.+.+. ++...++....+++..++..+.
T Consensus 4 ~~~~v~~~R~~F~sGrtr~~efR~~QL~~L~r~i~e~e~~i~~Al~~DL~k~~~----es~~~Ev~~~~~~i~~~l~~L~ 79 (477)
T KOG2456|consen 4 ISETVRRLRLAFSSGRTRPLEFRKQQLEALYRMIQENEKEIIEALAADLHKPEL----ESYLNEVGYVLNEIRYALENLP 79 (477)
T ss_pred HHHHHHHHHHHHhcCCcCChHHHHHHHHHHHHHHHhhHHHHHHHHHHHhccchh----HHHHHHHHHHHHHHHHHHHhhH
Confidence 456689999999999999999999999999999999999999999999987653 4566677777889999999999
Q ss_pred HHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 218 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
.|....+....... . -.+.+++.+|+|||++|+|| ||. +++..+++|||||||||+||||.+|.++..+++++
T Consensus 80 ~wv~~~~v~~~~~t---~--~dk~~I~~~p~GvVLiI~~wNyP~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakll 154 (477)
T KOG2456|consen 80 EWVKPEPVKKSFLT---F--LDKAYIEKEPLGVVLIIGPWNYPLNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLL 154 (477)
T ss_pred HhccccccCccccc---c--cCceeEEecCCceEEEEccCCCcceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHH
Confidence 88753322111111 1 12467889999999999998 795 67899999999999999999999999999999999
Q ss_pred HHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHH
Q 008588 296 TSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVA 371 (560)
Q Consensus 296 ~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~A 371 (560)
-+ +|+.+++.||.| .+++.++|.+ ++|+|+||||+.+||.||.+|+ +||+||||||+|++|++|+|++.|
T Consensus 155 p~----Yld~~~~~VV~Ggv~ETt~LL~~--rfD~IfyTGsp~VgkIim~aAaKhLTPvtLELGGKsP~~vd~~~d~~ia 228 (477)
T KOG2456|consen 155 PQ----YLDQDLIRVVNGGVPETTELLKQ--RFDHIFYTGSPRVGKIIMAAAAKHLTPVTLELGGKSPCYVDKNCDLKIA 228 (477)
T ss_pred HH----hcCcceEEEecCCCchHHHHHHh--hccEEEecCCchHHHHHHHHHHhcCCcEEEEcCCCCCeeecCCcCHHHH
Confidence 86 599999999995 6788999964 7999999999999999998884 899999999999999999999999
Q ss_pred HHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhc-CC----------------------------eE-ec
Q 008588 372 KNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-GV----------------------------GL-FG 420 (560)
Q Consensus 372 a~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~-~~----------------------------~~-~g 420 (560)
+++|.||++.|+| +|+|+++++++.+++ ++++++++..+++. |- ++ .|
T Consensus 229 ~~RI~~gk~~N~GQtCvapDYiL~~k~~~-~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl~~ll~~~~kv~~G 307 (477)
T KOG2456|consen 229 ARRIAWGKWMNSGQTCVAPDYILCSKSIQ-PKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRLSALLDETGKVAIG 307 (477)
T ss_pred HHHHHHHhhccCCCeeccCCeEEecHhhh-HHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHHHHHhcCCCceecC
Confidence 9999999999988 999999999999999 79999999888764 11 11 23
Q ss_pred Ccccc--ccc-c-C----C-CCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeE
Q 008588 421 GPRAS--KLL-Q-I----P-ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAV 491 (560)
Q Consensus 421 ~~~~~--~~~-p-v----~-~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V 491 (560)
|.... .++ | | + ++++|+||+|||||||+.|+|+||+|..+|+.+.+|++|+||+|.+...||.++..+|.|
T Consensus 308 g~~d~~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgv 387 (477)
T KOG2456|consen 308 GESDESDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGV 387 (477)
T ss_pred CccchhhcccCCeEEecCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCe
Confidence 33211 123 5 2 3 578999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcCc--CCCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 492 FHNASTRF--CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 492 ~VN~~~~~--~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
.+|+...+ ...+||||.++||+| ++||.+|++.|++.|++..+.
T Consensus 388 t~ND~i~H~~~~~lPFGGVG~SGmG----~YhGK~sFdTFSH~k~~l~rs 433 (477)
T KOG2456|consen 388 TVNDVIMHVTLDSLPFGGVGESGMG----RYHGKFSFDTFSHEKSCLLRS 433 (477)
T ss_pred eecceEEEEEeeccCcCCcCccccc----cccccccccccccchhhhhcc
Confidence 99996543 467899999999887 378999999999999987653
No 116
>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family. The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.
Probab=100.00 E-value=5.2e-69 Score=572.83 Aligned_cols=382 Identities=21% Similarity=0.245 Sum_probs=320.1
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcc
Q 008588 143 VAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADM 222 (560)
Q Consensus 143 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~ 222 (560)
++|++||+.|+++|.++|.++|++++++|++|.++|++++.+|++++... ..+...+++.....++..+++.++++++.
T Consensus 1 ~~A~~a~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~-~~~~~~~~~~~~~~ev~~~~~~~~~~a~~ 79 (397)
T cd07077 1 ESAKNAQRTLAVNHDEQRDLIINAIANALYDTRQRLASEAVSERGAYIRS-LIANWIAMMGCSESKLYKNIDTERGITAS 79 (397)
T ss_pred ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccHHHHHHhCCcHHHHHHHHHHHHHHHHh
Confidence 36899999999999999999999999999999999999999999877532 22334455555667899999999998754
Q ss_pred cc-cccccccccccCCCeeEEEeecceEEEEEEcCC-ChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcc
Q 008588 223 EE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 300 (560)
Q Consensus 223 ~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~ 300 (560)
.. ..+...+ .+...+++|+|+|||++|+|| ||...++++++||++||+||+|||+.+|+|+.++++++.+++.
T Consensus 80 ~~~~~~~~~~-----~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~ 154 (397)
T cd07077 80 VGHIQDVLLP-----DNGETYVRAFPIGVTMHILPSTNPLSGITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADA 154 (397)
T ss_pred cCcccceEec-----CCCceEEEEecceEEEEEeCCCCchHHHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhh
Confidence 32 2222111 122467899999999999998 6866789999999999999999999999999999999998754
Q ss_pred cccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCccceEEEcCCCCHHHHHHHHHhh
Q 008588 301 DTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDA 378 (560)
Q Consensus 301 ~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~ 378 (560)
..+|+|++|+|++ +.+.+..|..||+||+|+||||+++|+.+++.+. +|+++|+|||||+||++|||+|.|++.++++
T Consensus 155 ~g~p~~~v~~v~~~~~~~~~~l~~~~~vd~v~ftGs~~~~~~v~~~~~~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~ 234 (397)
T cd07077 155 AHGPKILVLYVPHPSDELAEELLSHPKIDLIVATGGRDAVDAAVKHSPHIPVIGFGAGNSPVVVDETADEERASGSVHDS 234 (397)
T ss_pred cCCCCceEEEecCCCHHHHHHHHcCCCCCEEEecCCHHHHHHHHHcCCCCceEEecCCcceEEEcCCCCHHHHHHHHHHh
Confidence 3399999999995 5567777878999999999999999999988775 9999999999999999999999999999999
Q ss_pred cCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccc-cCCCCCcccccccCceEEEEEeCCHH---
Q 008588 379 KIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLL-QIPETRLFHHEYNSMVCTVEIVDDVR--- 454 (560)
Q Consensus 379 ~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~-pv~~~~~~~eE~FGPVl~v~~~~~~d--- 454 (560)
+|.|+|.|+|++|+|||+++| |+|+++|+++++..|.++..+.+. .++ |.++|++++||+||||++|++|+|+|
T Consensus 235 ~~~~GQ~C~a~~~v~V~~~i~-d~~~~~l~~~~~~~G~~~~~g~~~-~~~~pt~~~~~~~~E~FgPvl~v~~~~~~~eai 312 (397)
T cd07077 235 KFFDQNACASEQNLYVVDDVL-DPLYEEFKLKLVVEGLKVPQETKP-LSKETTPSFDDEALESMTPLECQFRVLDVISAV 312 (397)
T ss_pred hccCCccCCCCeEEEEehhhh-HHHHHHHHHHHHhcCcCcCCCcee-eEEeccCCCChhhhhhhCceeEEEEEcchHHHH
Confidence 999944999999999999999 699999999998866655422211 112 23478899999999999999999996
Q ss_pred -HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCc--c--ceeccccCccccc-ccchhc
Q 008588 455 -AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLG--A--EVGISTSRIHARG-PVGVEG 528 (560)
Q Consensus 455 -eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g--~--~sG~~~~~~~~~G-~~gl~~ 528 (560)
||++++|+++|||+++|||+|.++++++++++++|+|+||+++....+.+||+| + .||+| +++| .+|+++
T Consensus 313 ~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~~~~gg~~~~~SG~g----~~~g~~~~~~~ 388 (397)
T cd07077 313 ENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKKGRGAFAGKGVERIVTSGMN----NIFGAGVGHDA 388 (397)
T ss_pred HHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccCCCccccCCCcceEEEcccc----CCCCCCCChHH
Confidence 566678999999999999999999999999999999999998765433444444 4 56654 4578 999999
Q ss_pred ceEEEEEE
Q 008588 529 LLTTRWIL 536 (560)
Q Consensus 529 ft~~K~v~ 536 (560)
|++.|+|+
T Consensus 389 ~~~~k~v~ 396 (397)
T cd07077 389 LRPLKRLV 396 (397)
T ss_pred hcceeEee
Confidence 99999985
No 117
>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase. Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.
Probab=100.00 E-value=1.6e-69 Score=585.44 Aligned_cols=380 Identities=16% Similarity=0.161 Sum_probs=311.2
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHH
Q 008588 138 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 217 (560)
Q Consensus 138 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~ 217 (560)
|++|+++|++||+.|+++|.++|.++|++++++|+++.+||++++++|++++.. ++ ..|+..+++.++
T Consensus 1 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~----~~--------~~ev~~~~~~l~ 68 (454)
T cd07129 1 VDAAAAAAAAAFESYRALSPARRAAFLEAIADEIEALGDELVARAHAETGLPEA----RL--------QGELGRTTGQLR 68 (454)
T ss_pred ChHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChH----HH--------HHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999999988766544321 11 135555666666
Q ss_pred HHhcccc---ccccccccccc----CCCeeEEEeecceEEEEEEcCC-Chh-h--HHHHHHHHHHhCCeEEeeCCcchHH
Q 008588 218 ILADMEE---PIGQILKRTEL----ADGLILEKTSCPLGVLLIVFES-RPD-A--LVQIASLAIRSGNGLLLKGGKEAMR 286 (560)
Q Consensus 218 ~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~PlGVV~~I~p~-~P~-~--~~~~~~~ALaaGNtvVlKPse~tp~ 286 (560)
+++...+ ..+........ ..+...+++++|+|||++|+|| ||. + .++++++||++||+||+|||+.||+
T Consensus 69 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~ 148 (454)
T cd07129 69 LFADLVREGSWLDARIDPADPDRQPLPRPDLRRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPG 148 (454)
T ss_pred HHHHHHHhcCCccccccccccccCCCCCccceEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCch
Confidence 5553221 11211110000 0122346789999999999998 795 3 3489999999999999999999999
Q ss_pred HHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-----CCEEEecCccce
Q 008588 287 SNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-----IPVLGHADGICH 359 (560)
Q Consensus 287 t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-----~~~~lElGGk~p 359 (560)
++.++++++.+++.++ +|+|+||+|++ +.++++.|..||+||+|+||||+.+|+.|++++. ||+++|||||||
T Consensus 149 t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~ 228 (454)
T cd07129 149 TSELVARAIRAALRATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNP 228 (454)
T ss_pred HHHHHHHHHHHHHHHhCCChhheEEeeCCcHHHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCc
Confidence 9999999999888888 99999999996 5467778888999999999999999999988653 799999999999
Q ss_pred EEEcCCC---CHHHHHHHHHhhcCCCCC-cccccceEEEeCc-cCCcchHHHHHHHHHhcCC------------------
Q 008588 360 VYVDKSA---NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV------------------ 416 (560)
Q Consensus 360 ~iV~~dA---Dld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~-i~dd~f~~~l~~~~~~~~~------------------ 416 (560)
+||++|| |+|.|++.+++|+|.|+| +|+|++|+|||++ +| |+|+++|+++++++.+
T Consensus 229 ~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~~i~-d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~ 307 (454)
T cd07129 229 VFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAG-DAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEA 307 (454)
T ss_pred EEEeCCcchHHHHHHHHHHHHHHhcCCCCeecCCceEEEeCcccH-HHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHH
Confidence 9999999 899999999999999987 9999999999999 99 6999999998886532
Q ss_pred -------eE-ecCccc-cccc--c-C----C----CCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecC-
Q 008588 417 -------GL-FGGPRA-SKLL--Q-I----P----ETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAED- 475 (560)
Q Consensus 417 -------~~-~g~~~~-~~~~--p-v----~----~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d- 475 (560)
++ .||... .++| | | + +|.+++||+||||++|++|+|+||||+++|+++|||++||||+|
T Consensus 308 a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~ 387 (454)
T cd07129 308 LAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEED 387 (454)
T ss_pred HHhcCCcEEEeCCCcCCCCCccCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCc
Confidence 22 244321 2333 5 2 2 47889999999999999999999999999999999999999999
Q ss_pred -HHHHHHHHhhc--CeeeEEEcCCcCcC---CCCccCC-ccceeccccCcccccccchhcceEE
Q 008588 476 -QKVAETFLCQV--DSAAVFHNASTRFC---DGARFGL-GAEVGISTSRIHARGPVGVEGLLTT 532 (560)
Q Consensus 476 -~~~a~~~~~~l--~~G~V~VN~~~~~~---~~~pfG~-g~~sG~~~~~~~~~G~~gl~~ft~~ 532 (560)
.+++++++++| ++|+|+||+.+... +..|||| .+.||+|+ .+.+|++++++||++
T Consensus 388 ~~~~a~~~~~~l~~~~G~v~iN~~~~~~~~~~~~pfgG~~k~sg~g~--~~~~g~~~~~~~~~~ 449 (454)
T cd07129 388 DLALARELLPVLERKAGRLLFNGWPTGVEVCPAMVHGGPYPATTDPR--FTSVGTAAIERFLRP 449 (454)
T ss_pred hHHHHHHHHHHHHhhCcEEEECCCCccccccCCCCCCCCcCCCCCCc--cccccHHHHHHhccc
Confidence 89999999999 69999999765433 3689998 88888763 212489999999986
No 118
>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like. Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.
Probab=100.00 E-value=7.7e-69 Score=573.35 Aligned_cols=376 Identities=20% Similarity=0.247 Sum_probs=299.2
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH-HH
Q 008588 138 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK-SI 216 (560)
Q Consensus 138 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~-~~ 216 (560)
|++|+++|++||+.|+++|.++|.++|++++++|++|.+||++.+++|.+++. .++. ..++...+. .+
T Consensus 1 ~~~av~~A~~A~~~W~~~~~~eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~----~ea~-------~~e~~~~~~~~~ 69 (436)
T cd07122 1 VDELVERARKAQREFATFSQEQVDKIVEAVAWAAADAAEELAKMAVEETGMGV----VEDK-------VIKNHFASEYVY 69 (436)
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc----HHHH-------HHHHHHHHHHHH
Confidence 47899999999999999999999999999999999999999998876665442 1221 124555555 56
Q ss_pred HHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHH
Q 008588 217 RILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV 294 (560)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l 294 (560)
++++.. +..+.... ..+...+++|+|+|||++|+|| ||+ ...+++++||++||+||+|||+.||+|+.+++++
T Consensus 70 ~~~~~~-~~~g~~~~----~~~~~~~~~~~P~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~ 144 (436)
T cd07122 70 NDIKDM-KTVGVIEE----DEEKGIVEIAEPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKI 144 (436)
T ss_pred HHHhcC-cceeeecc----CCCCCeEEEeecccEEEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHH
Confidence 666642 22222111 1234567889999999999998 796 4679999999999999999999999999999999
Q ss_pred HHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHH
Q 008588 295 ITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 372 (560)
Q Consensus 295 ~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa 372 (560)
++++|.++ +|+|+||+|++ ++++++.|..||+||+|+||||+++++..+ ...+|+++|||||||+||++|||+|.|+
T Consensus 145 ~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~v~~~a~-~~~~~~~~elgG~~p~iV~~dADl~~A~ 223 (436)
T cd07122 145 MREAAVAAGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAY-SSGKPAIGVGPGNVPAYIDETADIKRAV 223 (436)
T ss_pred HHHHHHHcCCCchhEEEecCCChHHHHHHHcCCCcCEEEEcCCHHHHHHHH-hcCCCEEEecCCCCeEEEcCCCCHHHHH
Confidence 99988889 99999999996 666788888899999999999999987653 3479999999999999999999999999
Q ss_pred HHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhc-------C---------CeE----ecCcc--c----c
Q 008588 373 NIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------G---------VGL----FGGPR--A----S 425 (560)
Q Consensus 373 ~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~-------~---------~~~----~g~~~--~----~ 425 (560)
+.+++|+|.|+| +|++++|+|||++|| |+|+++|+++...+ . ..+ .+... . .
T Consensus 224 ~~i~~~~f~~~GQ~C~a~~rv~V~~~i~-d~f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~ 302 (436)
T cd07122 224 KDIILSKTFDNGTICASEQSVIVDDEIY-DEVRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAG 302 (436)
T ss_pred HHHHHHhhccCCCCCCCCCEEEEechhH-HHHHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcC
Confidence 999999999987 999999999999999 69999999876543 1 001 01100 0 0
Q ss_pred cccc------------C-CCCCcccccccCceEEEEEeCCHHHHHHHHHhc----CCCceeEEEecCHHHHHHHHhhcCe
Q 008588 426 KLLQ------------I-PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQH----GSAHTDCIVAEDQKVAETFLCQVDS 488 (560)
Q Consensus 426 ~~~p------------v-~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~----~~GL~a~I~t~d~~~a~~~~~~l~~ 488 (560)
..++ + ++|+++ +|.||||++|++|+|+||||+++|++ +|||++||||+|.++++++++++++
T Consensus 303 ~~~~~ga~vl~~~~~~v~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~a 381 (436)
T cd07122 303 IEVPEDTKVLVAEETGVGPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPV 381 (436)
T ss_pred CCCCCCCeEEEEecCCCCCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCc
Confidence 1111 1 246777 56799999999999999999999998 8999999999999999999999999
Q ss_pred eeEEEcCCcCcCCC------Ccc----CCccceeccccCcccccccchhcceEEEEEEE
Q 008588 489 AAVFHNASTRFCDG------ARF----GLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 489 G~V~VN~~~~~~~~------~pf----G~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
|+||||+++.+..- +|+ |+|...|.+ ..+..+..+|+++|+|.+
T Consensus 382 G~V~IN~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 435 (436)
T cd07122 382 SRILVNTPSSLGGIGDTYNGLAPSLTLGCGSWGGNS-----TSDNVGPKHLLNIKRVAY 435 (436)
T ss_pred eEEEEeCCccccccCccCCCCCceeeeeccccCCCc-----CCCCCChHHhheeEeecc
Confidence 99999988753211 121 222221111 124467899999999865
No 119
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=8.6e-69 Score=624.79 Aligned_cols=385 Identities=18% Similarity=0.192 Sum_probs=329.5
Q ss_pred hhhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHH
Q 008588 111 SIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAA 189 (560)
Q Consensus 111 ~i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~ 189 (560)
.+.++.+ ++.+|++...+ ++||++|+++|++||+.|+++|..+|+++|++++++|++|.++|+.++++|.||+
T Consensus 662 ~v~nPa~~~~~vg~v~~a~------~~dv~~Av~aA~~A~~~W~~~p~~eRa~iL~r~Adlle~~~~eL~~l~~~EaGKt 735 (1318)
T PRK11809 662 PVINPADPRDIVGYVREAT------PAEVEQALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKT 735 (1318)
T ss_pred EeECCCCCCeeEEEEeCCC------HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCC
Confidence 3456666 67788888887 8999999999999999999999999999999999999999999999987665543
Q ss_pred HhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHH
Q 008588 190 QEAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIAS 267 (560)
Q Consensus 190 ~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~ 267 (560)
. .++ ..|+..+++.+++|+...+. .. ....++|+|||++|+|| ||+ +..++++
T Consensus 736 ~----~~A--------~~EV~eaidflryyA~~a~~---~~----------~~~~~~PlGVV~~IsPWNFPlai~~g~ia 790 (1318)
T PRK11809 736 F----SNA--------IAEVREAVDFLRYYAGQVRD---DF----------DNDTHRPLGPVVCISPWNFPLAIFTGQVA 790 (1318)
T ss_pred H----HHH--------HHHHHHHHHHHHHHHHHHHH---hc----------CCceeecccEEEEECCCccHHHHHHHHHH
Confidence 2 222 35889999999999853321 00 12458999999999998 796 5678999
Q ss_pred HHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 268 LAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 268 ~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
+||++||+||+||||+||+++..+++++++ + +|+|+||+|+| ++++++.|..||+|++|+||||+++|+.|++.
T Consensus 791 aALaAGN~VV~KPseqTpl~a~~lv~ll~e----AGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~FTGSt~tg~~I~~~ 866 (1318)
T PRK11809 791 AALAAGNSVLAKPAEQTPLIAAQAVRILLE----AGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGSTEVARLLQRN 866 (1318)
T ss_pred HHHHcCCeEEEeCCCCcHHHHHHHHHHHHH----hCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEEeCCHHHHHHHHHH
Confidence 999999999999999999999999999987 6 99999999996 67789999999999999999999999999876
Q ss_pred cC---------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC
Q 008588 346 TK---------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG 415 (560)
Q Consensus 346 a~---------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~ 415 (560)
++ +|+++|+|||||+||++|||+|.|++.+++|+|.|+| +|+|.+|+|||++|| |+|+++|+++++++.
T Consensus 867 aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Ia-d~fl~~L~~a~~~l~ 945 (1318)
T PRK11809 867 LAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVA-DRTLKMLRGAMAECR 945 (1318)
T ss_pred HhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHH-HHHHHHHHHHHHhcC
Confidence 42 6999999999999999999999999999999999987 999999999999999 699999999998763
Q ss_pred C----------------------------------eEe-cCcc-----ccccc--c-C---CCCCcccccccCceEEEEE
Q 008588 416 V----------------------------------GLF-GGPR-----ASKLL--Q-I---PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 416 ~----------------------------------~~~-g~~~-----~~~~~--p-v---~~~~~~~eE~FGPVl~v~~ 449 (560)
+ .+. |+.. ..++| | | +++.+++||+||||++|++
T Consensus 946 vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~~~~~~l~eEiFGPVL~V~~ 1025 (1318)
T PRK11809 946 MGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELKREVFGPVLHVVR 1025 (1318)
T ss_pred CCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEeccchhhhcCcccCceEEEEE
Confidence 2 111 1111 11333 5 3 4577899999999999999
Q ss_pred eC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccc
Q 008588 450 VD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVG 525 (560)
Q Consensus 450 ~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~g 525 (560)
|+ |+||||+++|+++|||+++|||+|.++++++++++++|+||||+..... ...||||.+.||.|. +.+|+++
T Consensus 1026 ~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~gavvg~qPFGG~g~SG~G~---kaGGp~y 1102 (1318)
T PRK11809 1026 YNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPFGGEGLSGTGP---KAGGPLY 1102 (1318)
T ss_pred eCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCCCcCCCCCCCcCcCCCCC---CCCCHHH
Confidence 96 7999999999999999999999999999999999999999999876543 346999988888752 3579999
Q ss_pred hhcceEEEE
Q 008588 526 VEGLLTTRW 534 (560)
Q Consensus 526 l~~ft~~K~ 534 (560)
+..|++.+.
T Consensus 1103 L~~f~~~~~ 1111 (1318)
T PRK11809 1103 LYRLLATRP 1111 (1318)
T ss_pred HHHHhccCC
Confidence 999999874
No 120
>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like. ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.
Probab=100.00 E-value=2.9e-68 Score=573.46 Aligned_cols=377 Identities=14% Similarity=0.096 Sum_probs=306.3
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHH
Q 008588 139 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 218 (560)
Q Consensus 139 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~ 218 (560)
++|+++|++||+.|+++|..+|.++|++++++|++|.+||++++++|++++.+ . ..|+...+..+++
T Consensus 2 ~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~-----~--------~~ev~~~i~~~~~ 68 (442)
T cd07084 2 ERALLAADISTKAARRLALPKRADFLARIIQRLAAKSYDIAAGAVLVTGKGWM-----F--------AENICGDQVQLRA 68 (442)
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHcCCchh-----h--------hhhhcchHHHHHH
Confidence 67899999999999999999999999999999999999999998776654421 1 1244455555555
Q ss_pred Hhccccc---ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHH
Q 008588 219 LADMEEP---IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHK 293 (560)
Q Consensus 219 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~ 293 (560)
++...+. .+..........+...+.+++|+|||++|+|| ||. +..+++++||++||+||+|||+.+|.++..+.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~ 148 (442)
T cd07084 69 RAFVIYSYRIPHEPGNHLGQGLKQQSHGYRWPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVR 148 (442)
T ss_pred HHHHHHhccccccccccCCCCccccceEEeecceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHH
Confidence 5432211 01100000000123457889999999999998 796 567899999999999999999999999999999
Q ss_pred HHHHhccccc-CcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCccceEEEcCCC-CHHH
Q 008588 294 VITSAIPDTV-GEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVDKSA-NLDV 370 (560)
Q Consensus 294 l~~~al~~al-P~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-~~~~lElGGk~p~iV~~dA-Dld~ 370 (560)
++++++ + |+|++|+|++....+..|..||++|+|+||||+++|+.|++.++ +|+++|||||||+||++|| |+|.
T Consensus 149 ~l~~ag---~~P~g~~~~v~g~~~~~~~l~~~~~v~~V~fTGs~~~g~~i~~~a~~~~v~lElgG~~~~iV~~dadd~~~ 225 (442)
T cd07084 149 LLHYAG---LLPPEDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKLALDAKQARIYLELAGFNWKVLGPDAQAVDY 225 (442)
T ss_pred HHHHhC---CCCccceEEeeCCcHHHHHHHcCCCCCEEEEECCHHHHHHHHHhccCCcEEEeccCcCcEEECCChhhHHH
Confidence 999732 6 99999999963337787888999999999999999999999887 8999999999999999999 6999
Q ss_pred HHHHHHhhcCCCCC-cccccceEEEeCc-cCCcchHHHHHHHHHhcCC--------------------------eE-ecC
Q 008588 371 AKNIVIDAKIDYPA-ACNAMETLLVHKD-LACNGALNELVVELQHEGV--------------------------GL-FGG 421 (560)
Q Consensus 371 Aa~~iv~~~f~n~g-~C~a~~rv~V~~~-i~dd~f~~~l~~~~~~~~~--------------------------~~-~g~ 421 (560)
|++.+++++|.|+| .|+|++|+|||++ +| |+|+++|++.++++.+ ++ +|+
T Consensus 226 a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~-~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~gg 304 (442)
T cd07084 226 VAWQCVQDMTACSGQKCTAQSMLFVPENWSK-TPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFSG 304 (442)
T ss_pred HHHHHHHHHhcccCCeecCCcEEEEeCCccH-HHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeCC
Confidence 99999999999988 9999999999999 99 6999999998887532 22 233
Q ss_pred ccc--------cc-cc-c-C-----CCC---CcccccccCceEEEEEeCC--HHHHHHHHHhcCCCceeEEEecCHHHHH
Q 008588 422 PRA--------SK-LL-Q-I-----PET---RLFHHEYNSMVCTVEIVDD--VRAAIDHIHQHGSAHTDCIVAEDQKVAE 480 (560)
Q Consensus 422 ~~~--------~~-~~-p-v-----~~~---~~~~eE~FGPVl~v~~~~~--~deAi~~aN~~~~GL~a~I~t~d~~~a~ 480 (560)
... .+ ++ | | ++| ++++||+||||++|++|+| +||||+++|+++|||++||||+|.++++
T Consensus 305 ~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~ 384 (442)
T cd07084 305 KELKNHSIPSIYGACVASALFVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384 (442)
T ss_pred cccccCCCCCcCCcccCCeEEEecCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHH
Confidence 321 13 33 5 2 245 8899999999999999999 9999999999999999999999999999
Q ss_pred HHHhhc-CeeeEEEcCC-cC-cCCCCccCC-ccceeccccCcccccccchhcceEEEEE
Q 008588 481 TFLCQV-DSAAVFHNAS-TR-FCDGARFGL-GAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 481 ~~~~~l-~~G~V~VN~~-~~-~~~~~pfG~-g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
++++++ ++|+||||+. +. ..+..|||| ++.||+|+. .+|.+++++||+...+
T Consensus 385 ~~~~~l~~~G~v~iN~~~~~~~~~~~~~gG~~k~sG~g~~---~~g~~~~~~~~~~~~~ 440 (442)
T cd07084 385 ELIGNLWVAGRTYAILRGRTGVAPNQNHGGGPAADPRGAG---IGGPEAIKLVWRCHAE 440 (442)
T ss_pred HHHHHHHhcCeEEECCCCCCCccccccCCCCCCCCCCCcc---ccchHHhhheeeeeee
Confidence 999999 9999999976 33 334567766 568887631 1388999999987653
No 121
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=100.00 E-value=1e-67 Score=617.28 Aligned_cols=389 Identities=18% Similarity=0.193 Sum_probs=333.4
Q ss_pred hhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH
Q 008588 112 IIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ 190 (560)
Q Consensus 112 i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~ 190 (560)
+.++.+ ++.+|++..++ ++++++|+++|++||+.|+++|.++|+++|++++++|+++.++|+++++.|.+|..
T Consensus 571 v~nP~~~~~~vg~v~~a~------~~~v~~Av~aA~~A~~~W~~~~~~~Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~ 644 (1208)
T PRK11905 571 VLNPADHDDVVGTVTEAS------AEDVERALAAAQAAFPEWSATPAAERAAILERAADLMEAHMPELFALAVREAGKTL 644 (1208)
T ss_pred EECCCCCCceEEEEeCCC------HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCH
Confidence 456667 77889888887 89999999999999999999999999999999999999999999998876654432
Q ss_pred hhchhHHHHHHhhCChhHHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHH
Q 008588 191 EAGYAKSLVSRLALKPGKISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASL 268 (560)
Q Consensus 191 ~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ 268 (560)
.++ ..|+..+++.+++|+...+.. . ....++|+|||++|+|| ||+ +..+++++
T Consensus 645 ----~ea--------~~Ev~eaid~lr~ya~~a~~~----------~---~~~~~~P~GVv~~IsPwNfPlai~~g~i~a 699 (1208)
T PRK11905 645 ----ANA--------IAEVREAVDFLRYYAAQARRL----------L---NGPGHKPLGPVVCISPWNFPLAIFTGQIAA 699 (1208)
T ss_pred ----HHH--------HHHHHHHHHHHHHHHHHHHHh----------c---CCceecCccEEEEEcCCcCHHHHHHHHHHH
Confidence 122 357888999999998532210 0 11357899999999998 796 56789999
Q ss_pred HHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhc
Q 008588 269 AIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST 346 (560)
Q Consensus 269 ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a 346 (560)
||++||+||+|||++||+++..+++++++ + +|+|++|+|+| ++++++.|..||+|++|+||||+++|+.|++.+
T Consensus 700 ALaaGN~VV~KPse~tpl~a~~l~~ll~e----AGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~FTGSt~vg~~I~~~~ 775 (1208)
T PRK11905 700 ALVAGNTVLAKPAEQTPLIAARAVRLLHE----AGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGSTEVARLIQRTL 775 (1208)
T ss_pred HHHcCCEEEEeCCcccHHHHHHHHHHHHH----cCCCcccEEEeeCCchHHHHHHHcCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999987 7 99999999996 666888899999999999999999999998875
Q ss_pred C------CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCe--
Q 008588 347 K------IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-- 417 (560)
Q Consensus 347 ~------~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~-- 417 (560)
+ +|+++|+|||||+||++|||+|.|++.+++|+|.|+| .|+|.+|+|||+++| |+|+++|+++++++.+.
T Consensus 776 A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~-d~f~e~L~~~~~~l~vGdP 854 (1208)
T PRK11905 776 AKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVA-DRVLTMLKGAMDELRIGDP 854 (1208)
T ss_pred HhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHH-HHHHHHHHHHHHHhcCCCc
Confidence 2 7999999999999999999999999999999999887 999999999999999 69999999999876431
Q ss_pred --------------------------------EecCcc----ccccc--c-C---CCCCcccccccCceEEEEEeC--CH
Q 008588 418 --------------------------------LFGGPR----ASKLL--Q-I---PETRLFHHEYNSMVCTVEIVD--DV 453 (560)
Q Consensus 418 --------------------------------~~g~~~----~~~~~--p-v---~~~~~~~eE~FGPVl~v~~~~--~~ 453 (560)
+.++.. ..++| | | +++.+++||+||||++|++|+ ++
T Consensus 855 ~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~~~~~~~~~eEiFGPVL~V~~y~~~dl 934 (1208)
T PRK11905 855 WRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIEIDSISDLEREVFGPVLHVVRFKADEL 934 (1208)
T ss_pred hhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEecCChHHhcCCccCceEEEEEeCCCCH
Confidence 111110 11333 5 3 457889999999999999997 79
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhcceE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLT 531 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~ 531 (560)
||||+++|+++|||+++|||+|.++++++++++++|+||||+..... ...||||.+.||.|. +.+|++++++|++
T Consensus 935 deaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga~vg~qPFGG~~~SG~G~---kaGGp~~L~~f~~ 1011 (1208)
T PRK11905 935 DRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGAVVGVQPFGGEGLSGTGP---KAGGPLYLGRLVR 1011 (1208)
T ss_pred HHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCCccCCCCCCCCCCCCCCC---cCCCHHHHHHHhh
Confidence 99999999999999999999999999999999999999999876543 346999988888652 3579999999999
Q ss_pred EEEEEEcC
Q 008588 532 TRWILRGN 539 (560)
Q Consensus 532 ~K~v~~~~ 539 (560)
.|++++..
T Consensus 1012 ~k~v~~~~ 1019 (1208)
T PRK11905 1012 EAPTPIPP 1019 (1208)
T ss_pred cceeeccc
Confidence 99998653
No 122
>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.
Probab=100.00 E-value=2e-67 Score=573.44 Aligned_cols=364 Identities=16% Similarity=0.147 Sum_probs=292.6
Q ss_pred hhhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHH---
Q 008588 114 KVLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQ--- 190 (560)
Q Consensus 114 ~~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~--- 190 (560)
++.+++.++++...+ .++++++|++||+.|+++++.+|.++|++++++|++|.+||++++++|.|++.
T Consensus 71 ~P~t~~~~~~~~~~~---------~~~av~aA~~A~~~W~~~~~~~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a 141 (551)
T TIGR02288 71 SPYGVELGVTYPQCD---------GDALLDAAHAALPGWRDAGARARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMA 141 (551)
T ss_pred CCCCCCEEEEEcCCC---------HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHH
Confidence 456677666665444 48999999999999999999999999999999999999999999988876653
Q ss_pred -hhchhHHHHHHhhCChhHHHHHHHHHHHHhccc-ccccccc---cccc-cCCCeeEEEeecceEEEEEEcCC-Chh-hH
Q 008588 191 -EAGYAKSLVSRLALKPGKISSLAKSIRILADME-EPIGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPD-AL 262 (560)
Q Consensus 191 -~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~~~~~---~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~ 262 (560)
++|++- +....++.++++++.. +..+... +... .......+.+++|+|||++|+|| ||. +.
T Consensus 142 ~e~gkp~-----------~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~P~GVv~vI~PwNfP~~~~ 210 (551)
T TIGR02288 142 FQAGGPH-----------AQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLKKRFTIVPRGIALVIGCSTFPTWNT 210 (551)
T ss_pred HhccChH-----------HHHHHHHHHHHHHHHHHhccCcccccccCCCCCcccccceEEEEecCeEEEEcCcccHHHHH
Confidence 222211 2233344455544321 1111111 1000 00011123478999999999998 796 45
Q ss_pred HHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC--CchhhHhhcCCCCccEEEeecCHHHH
Q 008588 263 VQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLV 339 (560)
Q Consensus 263 ~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~V~fTGS~~~G 339 (560)
.++++|||++||+||+|||+.||+++.++.+++.+++.++ ||+|+||+|++ +.++++.|..||+|++|+||||+++|
T Consensus 211 ~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~~~~~~L~~~p~v~~I~FTGSt~~G 290 (551)
T TIGR02288 211 YPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGHEAAQRLATDPAVRIIDFTGSNAFG 290 (551)
T ss_pred HHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcHHHHHHHHhCCCccEEEEECCHHHH
Confidence 8999999999999999999999998886666666666668 99999999995 56788888899999999999999999
Q ss_pred HHHHHhcC-CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCc---------cCCcchHHHHH
Q 008588 340 SQIKESTK-IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELV 408 (560)
Q Consensus 340 ~~i~~~a~-~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~---------i~dd~f~~~l~ 408 (560)
+.|++.+. +|+++|||||||+||++|||||.|++.+++|+|.|+| +|++++|+|||++ +| |+|+++|+
T Consensus 291 ~~I~~~aa~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~ri~V~~~~i~~~~g~~i~-def~~~L~ 369 (551)
T TIGR02288 291 QWLEQNARQAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSY-DEVAADLA 369 (551)
T ss_pred HHHHHhcccCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCCEEEEeccccccccchhHH-HHHHHHHH
Confidence 99998875 8999999999999999999999999999999999987 9999999999999 79 69999999
Q ss_pred HHHHhcCC------------------------------eEecCccc-----cc-cc--c-C----C-CCCcccccccCce
Q 008588 409 VELQHEGV------------------------------GLFGGPRA-----SK-LL--Q-I----P-ETRLFHHEYNSMV 444 (560)
Q Consensus 409 ~~~~~~~~------------------------------~~~g~~~~-----~~-~~--p-v----~-~~~~~~eE~FGPV 444 (560)
++++++ + .++|+... .+ +| | | + +|++++||+||||
T Consensus 370 ~~~~~l-vGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPV 448 (551)
T TIGR02288 370 TAIDGL-LGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPGARVRTPLLLKCDAADEAAYMQERFGPI 448 (551)
T ss_pred HHHHHh-cCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCCCEEeccEEEEcCCCCCHHHhCCCcCCE
Confidence 998875 1 12233221 12 23 5 2 3 6789999999999
Q ss_pred EEEEEeCCHHHHHHHHHhc--CCC-ceeEEEecCHHHHHHHHhhc----------CeeeEEEcCCcCc
Q 008588 445 CTVEIVDDVRAAIDHIHQH--GSA-HTDCIVAEDQKVAETFLCQV----------DSAAVFHNASTRF 499 (560)
Q Consensus 445 l~v~~~~~~deAi~~aN~~--~~G-L~a~I~t~d~~~a~~~~~~l----------~~G~V~VN~~~~~ 499 (560)
++|++|+|+||||+++|++ +|| |++||||+|.++++++.+++ ++|.|+||.+..+
T Consensus 449 l~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l~iN~~G~v~vN~~~~~ 516 (551)
T TIGR02288 449 AFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVALSLNLTGGVFVNQSAAF 516 (551)
T ss_pred EEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCeeecCCceEEEccCCCC
Confidence 9999999999999999999 567 99999999999999999999 9999999986543
No 123
>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional
Probab=100.00 E-value=9.3e-67 Score=602.17 Aligned_cols=387 Identities=17% Similarity=0.234 Sum_probs=312.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHH
Q 008588 134 KQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 213 (560)
Q Consensus 134 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~ 213 (560)
+.+||++++++|++||++|+++|.++|.++|++++++|++|.++|++++++|.|++. .++.. .+....+
T Consensus 10 ~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~----~e~~~-------~~~~~~~ 78 (862)
T PRK13805 10 NVAELDALVEKAKKAQEEFATFTQEQVDKIVRAAALAALDARIPLAKMAVEETGRGV----VEDKV-------IKNHFAS 78 (862)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCh----HHHHH-------HHHHHHH
Confidence 488999999999999999999999999999999999999999999999887765542 12211 1333444
Q ss_pred HHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHH
Q 008588 214 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 291 (560)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l 291 (560)
..++++....+..|.. .. ..+...+++++|+|||++|+|| ||+ +..+++++||++||+||+|||+.||+|+.++
T Consensus 79 ~~~~~~~~~~~~~g~~-~~---~~~~~~~~~~~P~GVv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~ 154 (862)
T PRK13805 79 EYIYNSYKDEKTVGVI-EE---DDEFGIIEIAEPVGVIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAA 154 (862)
T ss_pred HHHHHHhcCCCccccc-Cc---CCCCCeEEEeecceEEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHH
Confidence 4454443322222321 10 1234467889999999999998 796 4578999999999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHH
Q 008588 292 HKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLD 369 (560)
Q Consensus 292 ~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld 369 (560)
++++++++.++ +|+|+||+|++ +.+.++.|..||+||+|+||||+++++.+ ....+|+++|+|||||+||++|||||
T Consensus 155 ~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v~~~a-~~~~~pv~~e~gGk~p~iV~~dADl~ 233 (862)
T PRK13805 155 AKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHPGIALILATGGPGMVKAA-YSSGKPALGVGAGNVPAYIDKTADIK 233 (862)
T ss_pred HHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCCCccEEEecCCHHHHHHH-HhcCCCeEEECCCCCeEEEeCCCCHH
Confidence 99999988889 99999999996 55677777788999999999999998766 34579999999999999999999999
Q ss_pred HHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhc-------------------CC--eEecCccc---
Q 008588 370 VAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHE-------------------GV--GLFGGPRA--- 424 (560)
Q Consensus 370 ~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~-------------------~~--~~~g~~~~--- 424 (560)
.|++.+++|+|.|+| +|+|++|||||++|| |+|+++|+++...+ +. .+.|+...
T Consensus 234 ~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~-d~f~~~l~~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~ 312 (862)
T PRK13805 234 RAVNDILLSKTFDNGMICASEQAVIVDDEIY-DEVKEEFASHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIA 312 (862)
T ss_pred HHHHHHHHhhhccCCCccCCCceEEEehhhH-HHHHHHHHHhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHH
Confidence 999999999999877 999999999999999 69999987652110 01 12333210
Q ss_pred --cc-cc-c--------C----CCCCcccccccCceEEEEEeCCHHHHHHHHHh----cCCCceeEEEecCHHHHHHHHh
Q 008588 425 --SK-LL-Q--------I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQ----HGSAHTDCIVAEDQKVAETFLC 484 (560)
Q Consensus 425 --~~-~~-p--------v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~----~~~GL~a~I~t~d~~~a~~~~~ 484 (560)
.+ ++ | + ++|++++ |+||||++|++|+|+||||+++|+ ++|||+++|||+|.+++++|++
T Consensus 313 ~~~G~~~~p~~~~~i~~l~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~ 391 (862)
T PRK13805 313 EMAGFKVPEDTKILIAEVKGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGL 391 (862)
T ss_pred HHcCCCCCCCCeEEEEecCCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHh
Confidence 02 12 2 2 2466666 799999999999999999999998 4899999999999999999999
Q ss_pred hcCeeeEEEcCCc----------CcCCCCccCCccceeccccCcccccccchhcceEEEEEEEcCceee
Q 008588 485 QVDSAAVFHNAST----------RFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGHVV 543 (560)
Q Consensus 485 ~l~~G~V~VN~~~----------~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~~~~ 543 (560)
++++|+|+||.++ .+.+++|||+| .+|.+ ..+|+.|+++|++.|+|..+...++
T Consensus 392 ~l~~g~v~vN~~~~~~~~~~~~~~~~~~~~fG~G-~~g~~----~~~g~~g~~~~~~~k~v~~~~~~~~ 455 (862)
T PRK13805 392 RMKACRILVNTPSSQGGIGDLYNKLAPSLTLGCG-SWGGN----SVSENVGAKHLLNIKTVAKRRENMQ 455 (862)
T ss_pred hCCccEEEEeCCccccccccccCCcCcccccccc-CCCCC----cCCCCCCHHHhheeeeeeeccccce
Confidence 9999999999876 45678899974 44433 3569999999999999987654443
No 124
>KOG2454 consensus Betaine aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=1.2e-65 Score=508.40 Aligned_cols=418 Identities=17% Similarity=0.189 Sum_probs=348.9
Q ss_pred hhcCCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhch
Q 008588 115 VLEGKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGY 194 (560)
Q Consensus 115 ~~~G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~ 194 (560)
+.+|+-.|.+...+ +.||++-+-.|++||++|.+.+..+|.+.|+.+.+-+.+|.|.|++..++|.++. +
T Consensus 71 Patg~yLG~fp~~~------~tdide~v~la~kAQktW~~ssF~~Rr~fL~~L~~yIi~nQdliaevacrDtGKT----m 140 (583)
T KOG2454|consen 71 PATGKYLGYFPALS------PTDIDERVTLARKAQKTWAQSSFKLRRQFLRILLKYIIENQDLIAEVACRDTGKT----M 140 (583)
T ss_pred CCCcceeeecccCC------hhhHHHHHHHHHHHHhhhhhccHHHHHHHHHHHHHHHhhchhheeeeeecccCch----h
Confidence 45788888876666 8899999999999999999999999999999999999999999999887777654 3
Q ss_pred hHHHHHHhhCChhHHHHHHHHHHHHhccc-ccccccccccccCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHHH
Q 008588 195 AKSLVSRLALKPGKISSLAKSIRILADME-EPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIR 271 (560)
Q Consensus 195 ~~~~~~~~~~~~~ev~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALa 271 (560)
.++.+.++..+.+++.+.+..-+++-+.. ++.+... .-...++.++|+||+++|.|| ||+- .+.++..||.
T Consensus 141 vDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~------~yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlF 214 (583)
T KOG2454|consen 141 VDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAM------LYKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALF 214 (583)
T ss_pred hhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhhe------eeccceEEEeecceEEEeeecCCchhhhhhHHHHHHh
Confidence 34445566666677776666555443321 1211110 111246889999999999998 7974 5678999999
Q ss_pred hCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---
Q 008588 272 SGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK--- 347 (560)
Q Consensus 272 aGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~--- 347 (560)
+||++|+|-||++..++....|+++.+|+.. -|++++|+++.-+++++.|.+|+.|++|.|.||..+++.|++.|+
T Consensus 215 sGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itclpd~a~~ltSh~g~khitFiGSqpvak~i~~~AAk~L 294 (583)
T KOG2454|consen 215 SGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCLPDTAEALTSHSGVKHITFIGSQPVAKMIMRNAAKTL 294 (583)
T ss_pred cCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecCcchHhHhhcCCCcceEEEecCcHHHHHHHHhhhhhc
Confidence 9999999999999999999999999998766 999999999987778999999999999999999999999998874
Q ss_pred CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcC-----------
Q 008588 348 IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEG----------- 415 (560)
Q Consensus 348 ~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~----------- 415 (560)
+|++||||||+|+||++||||+..+..+++|-|.++| .|+..+|++||+++| |.|+..|-++++...
T Consensus 295 TPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGiER~iv~k~~Y-d~~i~~l~~rv~s~r~G~~~~~~vDM 373 (583)
T KOG2454|consen 295 TPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGIERFIVHKDIY-DAFIGQLTKRVKSVRAGPPLTGRVDM 373 (583)
T ss_pred CcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccceeEEEEecchH-HHHHHHHHHHHHHHHcCCCccCccch
Confidence 8999999999999999999999999999999999887 999999999999999 699999988877541
Q ss_pred -----------------------CeE-ecCccc-------cccc-c---C---CCCCcccccccCceEEEEEeCCHHHHH
Q 008588 416 -----------------------VGL-FGGPRA-------SKLL-Q---I---PETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 416 -----------------------~~~-~g~~~~-------~~~~-p---v---~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
+++ .||.|. ..+| | | ++|.|+|||.|||+++|+++++.|++|
T Consensus 374 GAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i 453 (583)
T KOG2454|consen 374 GAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVI 453 (583)
T ss_pred hhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEEecCchhhhHhhhccccchhhhhcCChHHHH
Confidence 111 133221 1234 4 2 369999999999999999999999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++|+++|||+++||+.|.+++.++++++++|+|-||+...+ --.+||||.+.||+|+ ..|.+||+..++.|+|.
T Consensus 454 ~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~cQlPFGG~k~SGyGr----FaG~EGLrg~Cn~Ksv~ 529 (583)
T KOG2454|consen 454 KLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYMCQLPFGGVKDSGYGR----FAGIEGLRGCCNVKSVA 529 (583)
T ss_pred hhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhheeccccCCccCCCccc----cccHHHHHHHhccccee
Confidence 999999999999999999999999999999999999996543 3458999999999873 56999999999999998
Q ss_pred Ec-Cceee-eCCCCceeee
Q 008588 537 RG-NGHVV-DGDQGVVYTH 553 (560)
Q Consensus 537 ~~-~~~~~-~~~~~~~~~~ 553 (560)
+. ..+.. +-|-++.|+-
T Consensus 530 yd~~~~~~t~ip~aldypi 548 (583)
T KOG2454|consen 530 YDRVAENATEIPEALDYPI 548 (583)
T ss_pred ccchhhhhccCCccccccC
Confidence 76 34444 6666777753
No 125
>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like. Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.
Probab=100.00 E-value=2.3e-63 Score=542.82 Aligned_cols=392 Identities=16% Similarity=0.138 Sum_probs=303.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 214 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~ 214 (560)
..|+++++++|++||+.|++++..+|.++|++++++|++|+++|+++++.|.|+++.+ +.- +....+++..++
T Consensus 83 ~adv~~ai~aA~~A~~~W~~~~~~~R~~il~~~a~~l~~~~~ela~a~~~e~Gk~~~~----a~q---a~~~~evd~a~e 155 (549)
T cd07127 83 QCDPDALLAAARAAMPGWRDAGARARAGVCLEILQRLNARSFEMAHAVMHTTGQAFMM----AFQ---AGGPHAQDRGLE 155 (549)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHCCCHHH----HHh---cccHHHHHHHHH
Confidence 3489999999999999999999999999999999999999999999998877665421 110 000024555555
Q ss_pred HHHHHhcccc-cccccc---cccc-cCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHHHhCCeEEeeCCcchHHH
Q 008588 215 SIRILADMEE-PIGQIL---KRTE-LADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRS 287 (560)
Q Consensus 215 ~~~~~~~~~~-~~~~~~---~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGNtvVlKPse~tp~t 287 (560)
.++++++... ..+... +... .+.....+..++|+|||++|+|| ||.+ .+.++++||++||+||+|||+.+|++
T Consensus 156 ~~~~a~~~~~~~~~~~~w~~~~~~~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls 235 (549)
T cd07127 156 AVAYAWREMSRIPPTAEWEKPQGKHDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILP 235 (549)
T ss_pred HHHHHHHHHHhccccccccCCCCCcccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchh
Confidence 5555443211 111100 0000 00011123467999999999998 7864 57899999999999999999999999
Q ss_pred HHHHHHHHHHhcccc-cCcCcEEeecC--CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCccceEEEc
Q 008588 288 NAILHKVITSAIPDT-VGEKLIGLVTS--REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGICHVYVD 363 (560)
Q Consensus 288 ~~~l~~l~~~al~~a-lP~gvv~vv~~--~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-~~~~lElGGk~p~iV~ 363 (560)
+.++.+++.++|.++ +|+|+||+|++ +.++++.|..||+|++|+||||+++|+.|++.+. +|+++|||||||+||+
T Consensus 236 ~~~~~~~i~~~l~eAGlP~gvv~~v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~~~~v~~ElGGkn~~IV~ 315 (549)
T cd07127 236 LAITVQVAREVLAEAGFDPNLVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQVYTEKAGVNTVVVD 315 (549)
T ss_pred HHHHHHHHHHHHHHcCcCcccEEEEeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhccCcEEEecCCcCeEEEC
Confidence 988777777777778 99999999995 3567888889999999999999999999998875 8999999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCc---------cCCcchHHHHHHHHHhcC------------------
Q 008588 364 KSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKD---------LACNGALNELVVELQHEG------------------ 415 (560)
Q Consensus 364 ~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~---------i~dd~f~~~l~~~~~~~~------------------ 415 (560)
+|||++.|++.+++|+|.|+| .|++++|+|||++ +| |+|+++|+++++++-
T Consensus 316 ~dADl~~aa~~i~~~~f~~sGQ~C~a~~ri~V~~s~i~~~~g~~i~-d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~ 394 (549)
T cd07127 316 STDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSF-DEVAADLAAAIDGLLADPARAAALLGAIQSPDT 394 (549)
T ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCEEEEECCccccccchhHH-HHHHHHHHHHHHHhcCCccccccccCCcCCHHH
Confidence 999999999999999999987 9999999999999 89 699999999887651
Q ss_pred -----------CeEecCccc-----cc-cc--c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcC--C-Cc
Q 008588 416 -----------VGLFGGPRA-----SK-LL--Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHG--S-AH 467 (560)
Q Consensus 416 -----------~~~~g~~~~-----~~-~~--p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~--~-GL 467 (560)
..++|+... .+ ++ | | ++|++++||+||||++|++|+|.||||+++|++. | ||
T Consensus 395 ~~ri~~a~~~g~vl~gg~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggL 474 (549)
T cd07127 395 LARIAEARQLGEVLLASEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAM 474 (549)
T ss_pred HHHHHHHHhCCCEEEcCCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCc
Confidence 012233221 12 23 6 2 3689999999999999999999999999999984 4 69
Q ss_pred eeEEEecCHHHHHHHHhh-cCee-eEEEcCCcCcC--CCCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 468 TDCIVAEDQKVAETFLCQ-VDSA-AVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 468 ~a~I~t~d~~~a~~~~~~-l~~G-~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
++||||+|.+.++++.++ .++| +++||...... ...|||+.+.||... ..+.....-.|...|-.++
T Consensus 475 t~sVfs~D~~~~~~~~~~~~~~~~~~~iN~tg~v~~~q~~~Fg~~~~sg~n~---~a~~~~~~~~fv~~r~~~~ 545 (549)
T cd07127 475 TVGVYSTDPEVVERVQEAALDAGVALSINLTGGVFVNQSAAFSDFHGTGANP---AANAALTDGAFVANRFRVV 545 (549)
T ss_pred eEEEEcCCHHHHHHHHHHHHHhcCcEEEcCCceEEEecCcCCCCCCCCCCCc---ccccccchhhhhhcceEEE
Confidence 999999999999999998 7777 89999432222 234599888776542 1234455556665554333
No 126
>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family. The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer
Probab=100.00 E-value=5.8e-63 Score=532.94 Aligned_cols=375 Identities=21% Similarity=0.255 Sum_probs=314.8
Q ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHH
Q 008588 139 REMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRI 218 (560)
Q Consensus 139 ~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~ 218 (560)
++++++|++||+.|++++.++|.++|+++++.|.++.++|+++++.|+++..+ +. ..|+..+++.+++
T Consensus 1 ~~av~~a~~a~~~w~~~~~~~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~----~~--------~~ei~~~i~~l~~ 68 (432)
T cd07078 1 DAAVAAARAAFKAWAALPPAERAAILRKLADLLEERREELAALETLETGKPIE----EA--------LGEVARAADTFRY 68 (432)
T ss_pred CHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHH
Confidence 36889999999999999999999999999999999999999998877654321 11 2345555555555
Q ss_pred Hhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 219 LADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 219 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
++...+. .+..... ...+...+.+++|+|||++|+|| +|. ..++.+++||++||+||+|||+.+|.++..+.+++
T Consensus 69 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l 146 (432)
T cd07078 69 YAGLARRLHGEVIPS--PDPGELAIVRREPLGVVGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELL 146 (432)
T ss_pred HHHHHHHhcCccccc--cCCCceEEEEEeecceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHH
Confidence 4432221 1111110 11244567889999999999997 795 56899999999999999999999999999999999
Q ss_pred HHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHH
Q 008588 296 TSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDV 370 (560)
Q Consensus 296 ~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~ 370 (560)
++ + +|+|++|++++ .++.+..|..|+++|+|+||||+.+|+.|++.+. +|+++|+|||||+||++|||++.
T Consensus 147 ~~----ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v~ftGs~~~~~~v~~~a~~~~~~~~~e~gg~~~~iV~~~ad~~~ 222 (432)
T cd07078 147 AE----AGLPPGVLNVVTGDGDEVGAALASHPRVDKISFTGSTAVGKAIMRAAAENLKRVTLELGGKSPLIVFDDADLDA 222 (432)
T ss_pred HH----cCCCcCcEEEEecCchHHHHHHhcCCCCCEEEEECcHHHHHHHHHHHhhccCcEEEecCCCCeeEECCCCCHHH
Confidence 87 6 89999999996 4446777778899999999999999999988774 89999999999999999999999
Q ss_pred HHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC---------------------------------
Q 008588 371 AKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV--------------------------------- 416 (560)
Q Consensus 371 Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~--------------------------------- 416 (560)
|++.+++++|.|+| .|++++++|||++++ ++|+++|++++++++.
T Consensus 223 aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~-~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g 301 (432)
T cd07078 223 AVKGAVFGAFGNAGQVCTAASRLLVHESIY-DEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEG 301 (432)
T ss_pred HHHHHHHHHHhccCCCccCCceEEEcHHHH-HHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999987 999999999999999 6999999999886532
Q ss_pred -eE-ecCcccc---c-cc-c-C-----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHH
Q 008588 417 -GL-FGGPRAS---K-LL-Q-I-----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFL 483 (560)
Q Consensus 417 -~~-~g~~~~~---~-~~-p-v-----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~ 483 (560)
++ +|+.... + ++ | | +++.+++||+||||++|++|+|+||||+++|+++|||++||||+|.+.+++++
T Consensus 302 ~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~ 381 (432)
T cd07078 302 AKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVA 381 (432)
T ss_pred CEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHH
Confidence 12 2333221 2 33 5 2 25689999999999999999999999999999999999999999999999999
Q ss_pred hhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 484 CQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 484 ~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
+++++|.|+||+.... .+..||||.+.||+| +++|++|+++||+.|+|+
T Consensus 382 ~~~~~g~v~iN~~~~~~~~~~pfgG~~~sg~g----~~~g~~~~~~~~~~k~v~ 431 (432)
T cd07078 382 ERLEAGTVWINDYSVGAEPSAPFGGVKQSGIG----REGGPYGLEEYTEPKTVT 431 (432)
T ss_pred HhcCcceEEECCCCCCCCCCCCcCCcCcCcCC----ccchHHHHHHhhceEEEE
Confidence 9999999999998776 677899999998876 357999999999999985
No 127
>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily. The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri
Probab=100.00 E-value=4.3e-61 Score=507.68 Aligned_cols=355 Identities=22% Similarity=0.243 Sum_probs=302.4
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhccc
Q 008588 144 AARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADME 223 (560)
Q Consensus 144 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~ 223 (560)
+|++||++|++++.++|.++|+++++.|.++.++|+++++.|++++.. ++ ..|+...++.+++++...
T Consensus 2 ~a~~a~~~w~~~~~~~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~----~~--------~~ev~~~~~~l~~~~~~~ 69 (367)
T cd06534 2 AARAAFKAWAALPPAERAAILRKIADLLEERREELAALETLETGKPIE----EA--------LGEVARAIDTFRYAAGLA 69 (367)
T ss_pred hHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH----HH--------HHHHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998877654321 11 235566666666655332
Q ss_pred c-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcc
Q 008588 224 E-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIP 300 (560)
Q Consensus 224 ~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~ 300 (560)
+ ..+...+ ....+...+.+++|+|||++|+|| +|.+ ..+++++||++||+||+|||+.+|.++..+++++.+
T Consensus 70 ~~~~~~~~~--~~~~~~~~~~~~~p~Gvv~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~--- 144 (367)
T cd06534 70 DKLGGPELP--SPDPGGEAYVRREPLGVVGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQE--- 144 (367)
T ss_pred HHhcCCccc--ccCCCceeEEEEEeeeEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHh---
Confidence 2 1111111 112344567889999999999997 6865 789999999999999999999999999999999987
Q ss_pred cc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC---CCEEEecCccceEEEcCCCCHHHHHHHH
Q 008588 301 DT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK---IPVLGHADGICHVYVDKSANLDVAKNIV 375 (560)
Q Consensus 301 ~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~---~~~~lElGGk~p~iV~~dADld~Aa~~i 375 (560)
+ +|+|+++++++ .++.++.|..|+++|+|+||||+++++.|.+.+. +|+++|+||+||+||++|||++.|++.+
T Consensus 145 -ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v~~tGs~~~~~~v~~~~~~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i 223 (367)
T cd06534 145 -AGLPPGVVNVVPGGGDEVGAALLSHPRVDKISFTGSTAVGKAIMKAAAENLKPVTLELGGKSPVIVDEDADLDAAVEGA 223 (367)
T ss_pred -cCCCcCeEEEEEcCchhHHHHHhcCCCcCEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCeEEECCCCCHHHHHHHH
Confidence 6 89999999996 4446777778899999999999999999988774 8999999999999999999999999999
Q ss_pred HhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccccccCceEEEEEeCCHH
Q 008588 376 IDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 376 v~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++++|.++| .|+++++||||++++ |+|+++|+ ++..... +++++++||+||||++|++|+|+|
T Consensus 224 ~~~~~~~~gq~C~s~~~v~v~~~~~-~~f~~~l~--------tl~~~~~-------~~~~~~~~E~fgPv~~v~~~~~~~ 287 (367)
T cd06534 224 VFGAFFNAGQICTAASRLLVHESIY-DEFVEKLV--------TVLVDVD-------PDMPIAQEEIFGPVLPVIRFKDEE 287 (367)
T ss_pred HHHHHhcCCCCCCCCcEEEEcHHHH-HHHHHhhc--------eeeeCCC-------CCCccccCCccCceEEEEecCCHH
Confidence 999999877 999999999999999 69998887 2221110 256899999999999999999999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCc-CCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRF-CDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~-~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
|||+++|++++||++||||+|...++++++++++|.|+||+++.. .+..||||.++||+|. .+|++++++||+.|
T Consensus 288 eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~~~~~~pfgg~~~sG~g~----~~g~~~~~~~~~~k 363 (367)
T cd06534 288 EAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIGVGPEAPFGGVKNSGIGR----EGGPYGLEEYTRTK 363 (367)
T ss_pred HHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCcccCccCC----CChHHHHHHhceEE
Confidence 999999999999999999999999999999999999999998776 6778999999998863 46999999999999
Q ss_pred EEE
Q 008588 534 WIL 536 (560)
Q Consensus 534 ~v~ 536 (560)
+|.
T Consensus 364 ~i~ 366 (367)
T cd06534 364 TVV 366 (367)
T ss_pred EEe
Confidence 974
No 128
>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-60 Score=477.52 Aligned_cols=408 Identities=43% Similarity=0.733 Sum_probs=389.6
Q ss_pred hhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHH
Q 008588 136 VGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKS 215 (560)
Q Consensus 136 ~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~ 215 (560)
.++.+..++||+|++..+.++.++|.+.|.++|+.|+++.++|.+++.+|++.++++|+++++++|+..+..+++.+++.
T Consensus 3 ~~~~~~~~~Ak~A~~~La~~st~~Kn~aL~a~A~~L~~~~~~IL~AN~~Dl~~are~gl~~~m~DRL~L~~~Ri~~ma~g 82 (417)
T COG0014 3 SELEELGKRAKAASRKLATLSTEEKNRALLAMADALEAARAEILAANAKDLAAARENGLSEAMLDRLALTPSRIEAMADG 82 (417)
T ss_pred hHHHHHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHHhHHHHHHhhHHHHHHHHHcCCcHHHHHHHcCCHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHH
Q 008588 216 IRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 295 (560)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~ 295 (560)
++..+.+++|.|+....+..++|.+.+.+|.|+|||++|+..+|+++....+.||++||+||||.+..+-.|+..+++++
T Consensus 83 l~~Va~L~DPvGev~~~~~~~nGL~i~~~rvPLGVigvIYEsRPnVtvdaaaLclKsGNAvILRGGsea~~Sn~ai~~~i 162 (417)
T COG0014 83 LRQVAALPDPVGEVIDGWTLPNGLQIYRVRVPLGVIGVIYESRPNVTVDAAALCLKSGNAVILRGGSEAIHSNAAIVEVI 162 (417)
T ss_pred HHHHhcCCCchHhhhccccCCCCCEEEEEEccceEEEEEEecCCccHHHHHHHHHhcCCEEEEeCcHHHhhhHHHHHHHH
Confidence 99999999999998877777889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccc-cCcCcEEeec--CCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHH
Q 008588 296 TSAIPDT-VGEKLIGLVT--SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAK 372 (560)
Q Consensus 296 ~~al~~a-lP~gvv~vv~--~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa 372 (560)
+++|.++ ||++.||+|+ +.+.+.++|..+..||+|...||....+.|.+.+..||+..+-|+++++|+++||+|.|.
T Consensus 163 ~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a~vPVi~~~~G~CHiyvd~~ADld~A~ 242 (417)
T COG0014 163 QEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENATVPVIEHGVGNCHIYVDESADLDKAL 242 (417)
T ss_pred HHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCCcCCEEecCcceEEEEecccCCHHHHH
Confidence 9999999 9999999998 478899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCcccccccc-C---CCCCcccccccCceEEEE
Q 008588 373 NIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ-I---PETRLFHHEYNSMVCTVE 448 (560)
Q Consensus 373 ~~iv~~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p-v---~~~~~~~eE~FGPVl~v~ 448 (560)
+.+++++......|++.+.++||+++. ++|+.+|.+.+...|+++.|++....++| . .+...|..|+..++++|.
T Consensus 243 ~ii~nAKtqrPs~CNA~EtLLVh~~ia-~~fLp~l~~~l~~~gvelr~d~~~~~~~~~~~~~A~e~Dw~tEyLd~ilavk 321 (417)
T COG0014 243 KIIVNAKTQRPSVCNAAETLLVHRAIA-KSFLPKLANALQEAGVELRGDAEALALLPDAVKPATEEDWDTEYLDLILAVK 321 (417)
T ss_pred HHHHcccCCCCcccchHHHHHcCHHHH-HHhHHHHHHHHHhcCeEEEcCHHHHHhccccCCCCchhhHHHHhhhheeEEE
Confidence 999999999999999999999999999 69999999999999999988876655555 2 256789999999999999
Q ss_pred EeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhc
Q 008588 449 IVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEG 528 (560)
Q Consensus 449 ~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ 528 (560)
.++++||||+++|.++.+||-+|.|+|...+++|.+++++-.||||.+++|.+++.||+|.|.|+|+++.|.+||.||++
T Consensus 322 vVd~ld~AI~HIn~y~S~HsdaIiTe~~~~a~~F~~~VDSAaVyvNASTRFtDG~~fG~GaEiGISTqKlHARGPmGLe~ 401 (417)
T COG0014 322 VVDSLDEAIAHINTYGSGHSDAIITEDYANAERFVNEVDSAAVYVNASTRFTDGGQFGLGAEIGISTQKLHARGPMGLEA 401 (417)
T ss_pred EeCCHHHHHHHHHHhCCCCCcceeeCCHHHHHHHHhhcchheEEEecccccccCccccCceEEEeecCcccCCCCCChhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEcCceeee
Q 008588 529 LLTTRWILRGNGHVVD 544 (560)
Q Consensus 529 ft~~K~v~~~~~~~~~ 544 (560)
+|..|++..+.+++|+
T Consensus 402 LTs~Kyiv~G~Gqvr~ 417 (417)
T COG0014 402 LTSYKYIVRGDGQVRP 417 (417)
T ss_pred hcceeEEEeCCceecC
Confidence 9999999999999984
No 129
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=100.00 E-value=4.6e-59 Score=470.53 Aligned_cols=366 Identities=15% Similarity=0.175 Sum_probs=304.3
Q ss_pred chhhHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHH
Q 008588 134 KQVGAREMAVAARESSR--RLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISS 211 (560)
Q Consensus 134 ~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~ 211 (560)
.-.||++|+++|+.||. +|++++..+|.+.|.++|+++++|.|||+.+...|-+.. ++-++ ...+..
T Consensus 457 ~v~dvd~av~aak~afe~g~w~~~sar~rg~~~y~la~lme~h~eelat~e~ldagav----ytlal-------kthvgm 525 (881)
T KOG2452|consen 457 QVTDVDKAVAAAKGAFENGRWGKISARDRGRLMYRLADLMEQHQEELATIEALDAGAV----YTLAL-------KTHVGM 525 (881)
T ss_pred HhhhHHHHHHHHhhhhhcCcccccchhhhhhhhhhccchhhhccchhhhhhhccccce----eeeee-------hhhcCc
Confidence 36789999999999997 599999999999999999999999999998765443221 11111 123555
Q ss_pred HHHHHHHHhcccc-cccccccccc-cCCCeeEEEeecceEEEEEEcCC-Chhh-HHHHHHHHHHhCCeEEeeCCcchHHH
Q 008588 212 LAKSIRILADMEE-PIGQILKRTE-LADGLILEKTSCPLGVLLIVFES-RPDA-LVQIASLAIRSGNGLLLKGGKEAMRS 287 (560)
Q Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~~~~~~~ALaaGNtvVlKPse~tp~t 287 (560)
.++.+||+++|.+ ..|.++|... +++.....++++|+|||++|.|| ||++ ..||.+.+|++-
T Consensus 526 si~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnyplmmlswk~aaclaa~-------------- 591 (881)
T KOG2452|consen 526 SIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPLMMLSWKTAACLAAQ-------------- 591 (881)
T ss_pred eehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchHHHHHHHHHHHHHHH--------------
Confidence 6778888888875 5566665322 22333467899999999999998 7974 579999998852
Q ss_pred HHHHHHHHHHhcccccCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC----CCEEEecCccceEEE
Q 008588 288 NAILHKVITSAIPDTVGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK----IPVLGHADGICHVYV 362 (560)
Q Consensus 288 ~~~l~~l~~~al~~alP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~----~~~~lElGGk~p~iV 362 (560)
-+.++++ .||+|+++| +..+|+-|..||+|++|-|||||++|+.||++|+ |++.|||||++|+|+
T Consensus 592 ~~k~~e~----------sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~im~sca~snikkvslelgg~sp~ii 661 (881)
T KOG2452|consen 592 VLKFAEL----------TGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCAISNVKKVSLELGGESPFII 661 (881)
T ss_pred Hhhhhhh----------cceEEEecCCcchhccccccCCccceeccccchHHHHHHHHHHhhcchheeeeeccCCCceEE
Confidence 1223333 589999995 8889999999999999999999999999999984 899999999999999
Q ss_pred cCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCC-------------------------
Q 008588 363 DKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGV------------------------- 416 (560)
Q Consensus 363 ~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~------------------------- 416 (560)
+.||||++|++....+.|+|-| .|++.-|+||.+||+ |+|+++++++++++++
T Consensus 662 fad~dl~kav~~~~~~vff~kgenciaagr~fi~~sih-d~fv~~~vee~~~~~ig~pldr~t~hgpqnh~ahl~kl~ey 740 (881)
T KOG2452|consen 662 FADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIH-DEFVRRVVEEVRKMKVGNPLDRDTDHGPQNHHAHLVKLMEY 740 (881)
T ss_pred EecCcHHHHHHhhccceeecCCcchhhhcceeehhhhh-HHHHHHHHHHHHhhccCCcccccccCCchhHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999 6999999999998643
Q ss_pred ---------eE-ecCccc--ccc-c-c-C-----CCCCcccccccCceEEEEEeC--CHHHHHHHHHhcCCCceeEEEec
Q 008588 417 ---------GL-FGGPRA--SKL-L-Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHIHQHGSAHTDCIVAE 474 (560)
Q Consensus 417 ---------~~-~g~~~~--~~~-~-p-v-----~~~~~~~eE~FGPVl~v~~~~--~~deAi~~aN~~~~GL~a~I~t~ 474 (560)
++ +||.+. .++ | | | +.|-+..||-||||+.|.+|+ |+|++++.+|+++|||+++|||+
T Consensus 741 ~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftr 820 (881)
T KOG2452|consen 741 CQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTR 820 (881)
T ss_pred HHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeec
Confidence 11 344432 233 4 4 3 246788999999999999997 58899999999999999999999
Q ss_pred CHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEEEEEEcC
Q 008588 475 DQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGN 539 (560)
Q Consensus 475 d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~ 539 (560)
|..++.++++.+.+|+|+||....-....||||.++||+|. ..|...+.+|...|+|++.+
T Consensus 821 d~~k~l~v~~~l~agtvfvnty~ktdvaapfggfkqsgfgk----d~ge~alneyl~~ktit~ey 881 (881)
T KOG2452|consen 821 DINKALYVSDKLQAGTVFVNTYNKTDVAAPFGGFKQSGFGK----DLGEAALNEYLRVKTVTFEY 881 (881)
T ss_pred ccchhhhhhhhhccceEEEeeccccccccCCCCcccccccc----chhHHHHhhheeeEEEEeeC
Confidence 99999999999999999999887666778999999999874 35889999999999998754
No 130
>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=2e-56 Score=460.57 Aligned_cols=388 Identities=19% Similarity=0.217 Sum_probs=324.0
Q ss_pred CCCchhhhhhc-CCceeeEEecCCCcccchhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHH
Q 008588 107 FAMDSIIKVLE-GKRVGTLFHRDAHLWVKQVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEAD 185 (560)
Q Consensus 107 ~~~~~i~~~~~-G~~~GT~~~~~~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~ 185 (560)
-++..+.++.+ ...+|++..++ ++|+++|++.|.+|++.|..+|+.+|+.+|++++|+++.+..+|..++.+|
T Consensus 126 g~~~pV~nPad~~dvVG~V~ea~------~~~v~~A~~~A~~a~p~W~atp~~eRAaiL~raAdlme~~m~~L~~L~~RE 199 (769)
T COG4230 126 GEPRPVINPADPDDIVGTVTEAT------EADVEQALEAAVAAAPIWSATPPAERAAILERAADLMEAQMPQLMGLLVRE 199 (769)
T ss_pred CCcccccCCCCHhHCeeeeeecC------HHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666655 44679988888 999999999999999999999999999999999999999999999887766
Q ss_pred HHHHHhhchhHHHHHHhhCChhHHHHHHHHHHHHhcccc-cccccccccccCCCeeEEEeecceEEEEEEcCC-Chhh-H
Q 008588 186 VAAAQEAGYAKSLVSRLALKPGKISSLAKSIRILADMEE-PIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDA-L 262 (560)
Q Consensus 186 ~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~-~ 262 (560)
-+|. ++++ +.|+++.++.+|||+...+ ..+ + ..++|+|+|.+|+|| ||+- .
T Consensus 200 AGKt----l~na--------IAEVREAVDFlrYYA~~ar~~~g----------~----~~~~~~G~vVcISPWNFPLAIF 253 (769)
T COG4230 200 AGKT----LSNA--------IAEVREAVDFLRYYAGQARDTFG----------N----LTHRPLGPVVCISPWNFPLAIF 253 (769)
T ss_pred hccc----hhhH--------HHHHHHHHHHHHHHHHHHhcccC----------c----cccCCCCcEEEECCCCchHHHH
Confidence 5443 2232 4689999999999996543 211 1 336999999999999 7964 4
Q ss_pred HHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeecC-CchhhHhhcCCCCccEEEeecCHHHHH
Q 008588 263 VQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTS-REEIPDLLKLDDVIDLVIPRGSNKLVS 340 (560)
Q Consensus 263 ~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~~-~~~~~~~l~~~~~v~~V~fTGS~~~G~ 340 (560)
...++.||++||+|+-||+|+||+.+..-++++++ + +|+|++|+++| |+++|..|+.|+++++|.|||||++.|
T Consensus 254 tGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~e----AGvP~~~lqLLpG~G~tvGa~L~~darv~GV~FTGSTevA~ 329 (769)
T COG4230 254 TGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHE----AGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTEVAR 329 (769)
T ss_pred HhHHHHHHHcCCccccCccccccHHHHHHHHHHHH----cCCChhhHHhcCCCCcccchhhhcCcccceEEEeCcHHHHH
Confidence 56899999999999999999999999999999997 7 99999999996 778999999999999999999999999
Q ss_pred HHHHhc----C--CCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHh
Q 008588 341 QIKEST----K--IPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQH 413 (560)
Q Consensus 341 ~i~~~a----~--~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~ 413 (560)
.|.++- + .|++.|.||.|+|||+.+|--|+++..++.|+|.++| +|.+..-+++++++. |..+++|+-+|.+
T Consensus 330 li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ~DvA-d~~l~mLKGAm~e 408 (769)
T COG4230 330 LIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQEDVA-DRILTMLKGAMAE 408 (769)
T ss_pred HHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhHH-HHHHHHHHHHHHH
Confidence 997653 2 7899999999999999999999999999999999987 999999999999999 6999999999988
Q ss_pred cCCe----E---ecC---------------------cc----------ccc-cc-c-C---CCCCcccccccCceEEEEE
Q 008588 414 EGVG----L---FGG---------------------PR----------ASK-LL-Q-I---PETRLFHHEYNSMVCTVEI 449 (560)
Q Consensus 414 ~~~~----~---~g~---------------------~~----------~~~-~~-p-v---~~~~~~~eE~FGPVl~v~~ 449 (560)
+.+. + +|. +. ..+ |+ | + ..-..++.|+|||||.|++
T Consensus 409 l~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El~~~~eL~rEVFGPVLHVvR 488 (769)
T COG4230 409 LRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIELENLDELQREVFGPVLHVVR 488 (769)
T ss_pred hccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEcCCHHHHHHHhccceeEEEE
Confidence 7431 0 010 00 001 12 2 1 2234579999999999999
Q ss_pred eC--CHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccc
Q 008588 450 VD--DVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVG 525 (560)
Q Consensus 450 ~~--~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~g 525 (560)
|+ ++|+.|+.+|.++||||.+|||+-.+.+.++.+++++|++|||...... ...||||-+-||. +.+.+|+..
T Consensus 489 y~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVGVQPFGG~GLSGT---GPKAGGp~Y 565 (769)
T COG4230 489 YKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVGVQPFGGEGLSGT---GPKAGGPLY 565 (769)
T ss_pred ecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEeeccCCCCCCCCC---CCCCCChHH
Confidence 97 7999999999999999999999999999999999999999999876542 3468887644443 346789999
Q ss_pred hhcceEEEE
Q 008588 526 VEGLLTTRW 534 (560)
Q Consensus 526 l~~ft~~K~ 534 (560)
|..|+..+.
T Consensus 566 L~Rl~~~~p 574 (769)
T COG4230 566 LLRLVSERP 574 (769)
T ss_pred HHHHHhcCC
Confidence 999887665
No 131
>KOG2453 consensus Aldehyde dehydrogenase [Energy production and conversion]
Probab=100.00 E-value=4.3e-53 Score=412.39 Aligned_cols=388 Identities=16% Similarity=0.180 Sum_probs=324.5
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAK 214 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~ 214 (560)
-+|-+.+++.|++|++.|...|..+|.++.+++.|.|++..+.|.++...++++-... -..|++..++
T Consensus 54 v~dye~~~k~a~ea~kiw~~vpapkrgeivrqigdalr~klq~lg~lvslemgkilae------------gvgevqeyvd 121 (507)
T KOG2453|consen 54 VQDYEIAIKEAKEAYKIWCEVPAPKRGEIVRQIGDALRTKLQNLGKLVSLEMGKILAE------------GVGEVQEYVD 121 (507)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhhhhhhhhhhHhhh------------cchhHHHHHH
Confidence 6788999999999999999999999999999999999999999999887666553221 2357888888
Q ss_pred HHHHHhccccc-ccccccccccCCCeeEEEeecceEEEEEEcCC-Chh-hHHHHHHHHHHhCCeEEeeCCcchHHHHHHH
Q 008588 215 SIRILADMEEP-IGQILKRTELADGLILEKTSCPLGVLLIVFES-RPD-ALVQIASLAIRSGNGLLLKGGKEAMRSNAIL 291 (560)
Q Consensus 215 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~-~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l 291 (560)
.++|..++.+. .|...|+. .++......+.|+|+|++|+.+ ||. .-.|.-+.||.+||+|++||++.||+|+...
T Consensus 122 icdyavglsr~l~g~i~pse--rpghalleqwnplg~vgvitafnfpcavygwnnaiaMv~gncVvWKpApttpLtTiAv 199 (507)
T KOG2453|consen 122 ICDYAVGLSRSLEGKIFPSE--RPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNAIAMVCGNCVVWKPAPTTPLTTIAV 199 (507)
T ss_pred HHHHhhhhhhhhCCcccCCC--CCchhHHHhcCCcceEEEEEeccCCceeeccCchhhhhhcceeEecCCCCcceeHHHH
Confidence 88887776653 35555543 2355556789999999999985 785 4456666789999999999999999999999
Q ss_pred HHHHHHhcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc---CCCEEEecCccceEEEcCCCC
Q 008588 292 HKVITSAIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---KIPVLGHADGICHVYVDKSAN 367 (560)
Q Consensus 292 ~~l~~~al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a---~~~~~lElGGk~p~iV~~dAD 367 (560)
.+++.+.|.+- +|++......|+.+.++.+..+.+++.++||||+++||.+.+.- .-+.+|||||||++||++|||
T Consensus 200 tklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~vqarfgk~llelggnnaiiv~edad 279 (507)
T KOG2453|consen 200 TKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQVQARFGKLLLELGGNNAIIVNEDAD 279 (507)
T ss_pred HHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHHHHHhhhHHHhhcCCceEEEecccc
Confidence 99999999888 99998888888888999999999999999999999999987654 368999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCe-------E---------------------
Q 008588 368 LDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------L--------------------- 418 (560)
Q Consensus 368 ld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~-------~--------------------- 418 (560)
|..++...++++...+| +|+...|++||+++| |+.+++|.+..++..+. +
T Consensus 280 l~lvvps~lfaavgtagqrctt~rrl~~hesvy-d~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak 358 (507)
T KOG2453|consen 280 LNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVY-DQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAK 358 (507)
T ss_pred ceeeehHHHHHHhcccccchhhhhHHHhhHHHH-HHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHH
Confidence 99999999999998887 999999999999999 69999999988875321 1
Q ss_pred -------ecCccc--cc-cc-c-C----CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHH
Q 008588 419 -------FGGPRA--SK-LL-Q-I----PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETF 482 (560)
Q Consensus 419 -------~g~~~~--~~-~~-p-v----~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~ 482 (560)
.||+.. .+ |+ | | .+.++..+|+|.|||.|.+|++++||+++-|..+.||++||||+|+.++.|+
T Consensus 359 ~~ggki~yggkv~er~gnfveptivtl~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw 438 (507)
T KOG2453|consen 359 ASGGKIEYGGKVLERDGNFVEPTIVTLKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRW 438 (507)
T ss_pred hcCCeEEECCEeeccCCCcccceEEEecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhh
Confidence 122211 11 22 5 2 3568899999999999999999999999999999999999999999999998
Q ss_pred Hh--hcCeeeEEEcCCcCcC-CCCccCCccceeccccCcccccccchhcceEEEEEEEcCce
Q 008588 483 LC--QVDSAAVFHNASTRFC-DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILRGNGH 541 (560)
Q Consensus 483 ~~--~l~~G~V~VN~~~~~~-~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~~~~~ 541 (560)
.. .-++|.|+||.++... -+..||+-++-|-| ++.|.++.++|++..+-+++++.
T Consensus 439 ~gpkgsdcgivnvniptsgaeiggafggek~tggg----resgsdswkqymrrstctinysk 496 (507)
T KOG2453|consen 439 MGPKGSDCGIVNVNIPTSGAEIGGAFGGEKETGGG----RESGSDSWKQYMRRSTCTINYSK 496 (507)
T ss_pred hCCCCCccceEEecCCCCchhhcccccCccccCCC----cccCchHHHHHHhhceeeeeccc
Confidence 75 6799999999988653 45668876665433 46688999999998888888764
No 132
>KOG4165 consensus Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-49 Score=385.74 Aligned_cols=421 Identities=63% Similarity=0.966 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHHHHHH
Q 008588 138 AREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLAKSIR 217 (560)
Q Consensus 138 v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~ 217 (560)
+++..+.||.|++..+.++.++|.++|.+++++|+.+..+|.+++.+|+..+++.|+.++++.|+.....++..+...++
T Consensus 2 ~e~~a~~aR~a~r~LqaLs~e~R~~il~~iad~L~~~~~~I~~aN~~Dla~Ake~GL~~sll~RL~l~~~K~~sl~~g~~ 81 (433)
T KOG4165|consen 2 VEEMAENAREAGRILQALSNEDRADILHHIADLLVDNEKEILAANKKDLAEAKEAGLAESLLKRLDLSPGKISSLAAGLR 81 (433)
T ss_pred HHHHHHHHHHHhhHHHhcChhhHHHHHHHHHHHHHhhHHHHHhcchhhHHHHHhcCccHHHHHHhcCChHHHHHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccccccccccCCCeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHH
Q 008588 218 ILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITS 297 (560)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~ 297 (560)
..+...++.|++........+...+..-.|+||-++|+...|-......+.|+++||.+++|....+..+...+.+++++
T Consensus 82 ~ia~~edpvGRVl~~~~ladgL~L~qvt~PiGvLLVIFESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~ 161 (433)
T KOG4165|consen 82 QIAELEDPVGRVLKKTRLADGLELEQVTVPIGVLLVIFESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQE 161 (433)
T ss_pred HHHhcccchhhheeeeeccCCceEEEeeccceEEEEEeccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHH
Confidence 99998889998766444557778888899999999999999976666677899999999999999999999999999999
Q ss_pred hcccc-cCcCcEEeecCCchhhHhhcCCCCccEEEeecCHHHHHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHH
Q 008588 298 AIPDT-VGEKLIGLVTSREEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVI 376 (560)
Q Consensus 298 al~~a-lP~gvv~vv~~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa~~iv 376 (560)
|+.+. .|.+.+|+|++.+++.++|..+..||+|...||+...|.|...+..||+-.--|-+.+||++|||+++|.+.+.
T Consensus 162 al~~~~~~~~aV~LV~sREev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~tkIPVLGHA~GichvYvd~dad~~kA~riv~ 241 (433)
T KOG4165|consen 162 ALGTHGGPGKAVQLVTSREEVSDLLKLDDYIDLVIPRGSSDLVRSIKDTTKIPVLGHAEGICHVYVDKDADLDKAKRIVR 241 (433)
T ss_pred HhhhccCchhhhhheecHHHHHHHhhhhhheeEEecCCcHHHHHHHhhcccCcccccccceeEEEeccccCHHHHHHHHh
Confidence 99888 89999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred hhcCCCCCcccccceEEEeCc-cCCcchHHHHHHHHHhcCCeEecCccccccccC--CCCCcccccccCceEEEEEeCCH
Q 008588 377 DAKIDYPAACNAMETLLVHKD-LACNGALNELVVELQHEGVGLFGGPRASKLLQI--PETRLFHHEYNSMVCTVEIVDDV 453 (560)
Q Consensus 377 ~~~f~n~g~C~a~~rv~V~~~-i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv--~~~~~~~eE~FGPVl~v~~~~~~ 453 (560)
.++..+.-.|++.+.++||++ .. ..|.+.|...++..|+++.++++...+.-+ |...-|+.|+-.-.++|-.++|.
T Consensus 242 DaK~dYPAaCNAmETLLIh~dl~~-~~~~~~l~~~l~~~gVtl~agpkl~~~l~~~p~e~~s~~~Ey~~l~~~ievV~~v 320 (433)
T KOG4165|consen 242 DAKCDYPAACNAMETLLIHKDLEQ-SPFFDDLINMLKEEGVTLHAGPKLAALLKFSPPEAKSFNTEYGSLECTIEVVDSV 320 (433)
T ss_pred cccCCCchhhhhHHHHhccHhhhh-cchHHHHHHHHHhcCeEEecChhHHhhcCcCCchhhhhhhhhcchheeeeecccH
Confidence 999998889999999999998 44 489999999999999999888765433213 34567899999999999999999
Q ss_pred HHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcCcCCCCccCCccceeccccCcccccccchhcceEEE
Q 008588 454 RAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTRFCDGARFGLGAEVGISTSRIHARGPVGVEGLLTTR 533 (560)
Q Consensus 454 deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~~~~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K 533 (560)
++||+.+|.++.+||-+|.|+|...|++|.+++++..|++|.++++.+++.||+|.|.|+|+++.|.+||.|++.++.+|
T Consensus 321 ~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NASTRFaDGfRfGlGaEVGIST~rIHARGPvGveGLlttk 400 (433)
T KOG4165|consen 321 QSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNASTRFADGFRFGLGAEVGISTSRIHARGPVGVEGLLTTK 400 (433)
T ss_pred HHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccccccccccccccceeeeeccceeccCCccccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCceeeeCCC---CceeeeccccCC
Q 008588 534 WILRGNGHVVDGDQ---GVVYTHKNLALQ 559 (560)
Q Consensus 534 ~v~~~~~~~~~~~~---~~~~~~~~~~~~ 559 (560)
|+..+.+++-.... ..+|.|+++-++
T Consensus 401 w~lRG~gqvvsd~~~~G~~~y~H~~l~i~ 429 (433)
T KOG4165|consen 401 WLLRGKGQVVSDFNEGGKRAYLHEDLPID 429 (433)
T ss_pred eEEecCCceeccccCCCceeeeecCCChh
Confidence 99999999884444 899999998754
No 133
>KOG2455 consensus Delta-1-pyrroline-5-carboxylate dehydrogenase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-46 Score=377.88 Aligned_cols=379 Identities=18% Similarity=0.197 Sum_probs=293.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHH-HcHHHHHHHHHHHHHHHHhhchhHHHHHHhhCChhHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVADALE-ANESLIKVENEADVAAAQEAGYAKSLVSRLALKPGKISSLA 213 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~-~~~~el~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~ 213 (560)
..+|++||++|.+|++.|..+|..+|.+|++|.|+++. +.+-+|....+ ++.+|. ..++.+ .-..+++
T Consensus 95 ~k~ie~AIkaAl~a~~~W~~~PiadR~aI~lkAAdlistkyr~~l~aatM--lgqgKt--~~qAei-------Da~~eLi 163 (561)
T KOG2455|consen 95 KKQIEKAIKAALSAQKTWELVPIADRLAIFLKAADLISTKYRYDLLAATM--LGQGKT--AIQAEI-------DAAAELI 163 (561)
T ss_pred HHHHHHHHHHHHhhcCccccCcHHHHHHHHHHHHHHhcchHHHHHHHHHH--hcCCcc--hHHHHH-------HHHHHHH
Confidence 88999999999999999999999999999999999998 55555544322 333332 112211 1233455
Q ss_pred HHHHHHhcccc-cccccccccccCCCeeEEEeecce-EEEEEEcCCC-hhhHHH-HHHHHHHhCCeEEeeCCcchHHHHH
Q 008588 214 KSIRILADMEE-PIGQILKRTELADGLILEKTSCPL-GVLLIVFESR-PDALVQ-IASLAIRSGNGLLLKGGKEAMRSNA 289 (560)
Q Consensus 214 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Pl-GVV~~I~p~~-P~~~~~-~~~~ALaaGNtvVlKPse~tp~t~~ 289 (560)
+.+|+.+.... ....... .. ..+......++|+ |-|++|+||+ -.+... ..+|||+ ||+|++|||..+.+++.
T Consensus 164 df~R~na~ya~eL~~~qpi-~~-~~~t~ns~~yRpleGFVaAisPFnftAI~gnLa~aPaLM-GN~VLwkPS~ta~lssY 240 (561)
T KOG2455|consen 164 DFFRFNAKYASELYAQQPI-SQ-TKGTWNSMEYRPLEGFVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAALSSY 240 (561)
T ss_pred HHHHHhHHHHHHhhhcCCc-cc-cCCCCcceeeccccceeEEecccceeeeccccccChhhh-cceeeecccchhHHHHH
Confidence 55665442211 1111111 11 2334445668898 9999999974 334433 4567775 99999999999999999
Q ss_pred HHHHHHHHhcccc-cCcCcEEeec-CCchhhHhhcCCCCccEEEeecCHHHHHHHHHhc---------CCCEEEecCccc
Q 008588 290 ILHKVITSAIPDT-VGEKLIGLVT-SREEIPDLLKLDDVIDLVIPRGSNKLVSQIKEST---------KIPVLGHADGIC 358 (560)
Q Consensus 290 ~l~~l~~~al~~a-lP~gvv~vv~-~~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a---------~~~~~lElGGk~ 358 (560)
++-++++| | ||+|++|.|+ ++...++.+..+|.+.++.||||+.+=|++.+.- --+++.|.||||
T Consensus 241 ii~~il~E----AGlP~GvinFvPad~~~f~dtita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkN 316 (561)
T KOG2455|consen 241 IIYRILRE----AGLPPGVINFVPADGPLFGDTITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKN 316 (561)
T ss_pred HHHHHHHH----cCCCccceeeccCCCCeecceeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcc
Confidence 99999998 6 9999999999 5788899999999999999999999988886653 168999999999
Q ss_pred eEEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCe--------------------
Q 008588 359 HVYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVG-------------------- 417 (560)
Q Consensus 359 p~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~-------------------- 417 (560)
--+|+++||++.++...+.|+|..+| .|.|.+|+||++++. +.+.++|+++-+++.+.
T Consensus 317 FHfVH~SA~VesvV~~TvrsAfey~GQkcsA~SRmYvp~s~w-p~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~ 395 (561)
T KOG2455|consen 317 FHFVHASADVESVVSSTVRSAFEYQGQKCSACSRMYVPESLW-PQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFA 395 (561)
T ss_pred eEEeccccchHHHHHHHHHHHHhhcccccchhhhcccchhhc-HHHHHHHHHHHhhcccCCccccccchhhhhccHHHHH
Confidence 99999999999999999999998776 999999999999999 79999998887765321
Q ss_pred -----------------EecCcc--ccccc--c-C-----CCCCcccccccCceEEEEEeC--CHHHHHHHH-HhcCCCc
Q 008588 418 -----------------LFGGPR--ASKLL--Q-I-----PETRLFHHEYNSMVCTVEIVD--DVRAAIDHI-HQHGSAH 467 (560)
Q Consensus 418 -----------------~~g~~~--~~~~~--p-v-----~~~~~~~eE~FGPVl~v~~~~--~~deAi~~a-N~~~~GL 467 (560)
++||.- ..++| | | |.+++|.||+|||||+|+.|+ +++|+++++ |.++|||
T Consensus 396 rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaL 475 (561)
T KOG2455|consen 396 RLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYAL 475 (561)
T ss_pred HHHHHHHhhccCccceeeecCcccCCCCeeecceEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCccee
Confidence 124321 23455 6 2 468999999999999999987 589999997 7789999
Q ss_pred eeEEEecCHHHHHHHHh--hcCeeeEEEcCCcCcC--CCCccCCccceeccccCcccccccchhcceEEEEE
Q 008588 468 TDCIVAEDQKVAETFLC--QVDSAAVFHNASTRFC--DGARFGLGAEVGISTSRIHARGPVGVEGLLTTRWI 535 (560)
Q Consensus 468 ~a~I~t~d~~~a~~~~~--~l~~G~V~VN~~~~~~--~~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v 535 (560)
+++||++|.+..++..+ +..+|+.+||+-++.. ...||||.|.||... ..+|++-+..|+.++++
T Consensus 476 TGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcTGsvvgqqpFGGaR~SGTND---KaGgp~~l~RwtSp~~i 544 (561)
T KOG2455|consen 476 TGAIFAQDREVVLHALDVLRMAAGNFYINDKCTGSVVGQQPFGGARLSGTND---KAGGPHYLLRWTSPLSI 544 (561)
T ss_pred ccccccccHHHHHHHHHHHHhhhcceEEccccccceeeccccCcccccCCCC---CCCCceEEEeecCcchh
Confidence 99999999998888877 4568999999965543 457999999988642 34688877788777665
No 134
>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.
Probab=99.98 E-value=5.1e-31 Score=282.40 Aligned_cols=318 Identities=13% Similarity=0.085 Sum_probs=232.3
Q ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHHHHH---HHHHHHHHhhchhHHHHHHhhCChhHHHHHH
Q 008588 137 GAREMAVAARESSRRLQALQSQDRRKILLDVADALEANESLIKVEN---EADVAAAQEAGYAKSLVSRLALKPGKISSLA 213 (560)
Q Consensus 137 ~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~ev~~~~ 213 (560)
-+++.++..+++++.|..-+...|...++++...+..+.+.+.+++ ..++.+ ..+...+
T Consensus 25 ~~~~iv~~l~~~~~~~~~~~~~~r~~~l~~l~~~~~~~~~~~~~a~~~l~~~~~r------------------~~l~~~l 86 (422)
T cd07080 25 PVEEIVDFLDRAGKRLLDPDYPLRQQAERLLPTVTGYSEEMLREGLKRLMALFRR------------------ENLERIL 86 (422)
T ss_pred CHHHHHHHHHHHHHHhcCCCchHHHHHHHhhhhccCCCHHHHHHHHHHHHHHcCH------------------HHHHHHH
Confidence 3577788888999999999999999999999999988888777653 222211 1111111
Q ss_pred HHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC-ChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHH
Q 008588 214 KSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILH 292 (560)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~ 292 (560)
.. .+. ..+...+.. +.+...+++++|+|||++|+|| +|.+.++++++||++||++|+|||+.+|.++.++.
T Consensus 87 ~~--el~-~~~~Ld~w~-----~~~~~~~~~~~P~Gvv~~I~p~N~P~l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~ 158 (422)
T cd07080 87 ER--ELG-SPGILDEWV-----PPGRGGYIRAQPRGLVVHIIAGNVPLLPVWSIVRGLLVKNVNLLKMSSSDPLTATALL 158 (422)
T ss_pred HH--hcC-CcccccCCc-----cCCCCCeeEEcCCceEEEEccCCccccHHHHHHHHHHhcCceEEECCCccchHHHHHH
Confidence 11 011 000010101 1122456789999999999997 69878899999999999999999999999999999
Q ss_pred HHHHHhcccccCc----CcEEeec--C-CchhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCcc-ceEEEc
Q 008588 293 KVITSAIPDTVGE----KLIGLVT--S-REEIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADGI-CHVYVD 363 (560)
Q Consensus 293 ~l~~~al~~alP~----gvv~vv~--~-~~~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-~~~~lElGGk-~p~iV~ 363 (560)
+++.+ ++|+ +.++++. | ++++++.|..++ |+|+||||+++|+.|++.+. .+.++|+||| +++|+.
T Consensus 159 ~~l~~----~~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~Gs~~~~~~i~~~a~~~~~~Le~Ggk~s~~vi~ 232 (422)
T cd07080 159 RSLAD----VDPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWGGEEAVKAIRSLLPPGCRLIDFGPKYSFAVID 232 (422)
T ss_pred HHHHh----cCCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeCCHHHHHHHHHhCCCCCeeeecCCceeEEEec
Confidence 99986 4887 8899984 4 444677776665 99999999999999998875 5689999999 555555
Q ss_pred CCC----CHHHHHHHHHhhcCCCCC-cccccceEEEeCcc---CCcchHHHHHHHHHhcCCeEecCc-cc----------
Q 008588 364 KSA----NLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDL---ACNGALNELVVELQHEGVGLFGGP-RA---------- 424 (560)
Q Consensus 364 ~dA----Dld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i---~dd~f~~~l~~~~~~~~~~~~g~~-~~---------- 424 (560)
++| |++.+++.+++++|.|+| .|+|++++|||+++ + ++|.++|.++++++....-.+. ..
T Consensus 233 ~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~-~~f~~~l~~~l~~~~~~~p~~~~~~~~~~~~~~~r 311 (422)
T cd07080 233 REALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEEL-REFAEALAAALERLPRRYPALSLSAAESAKIARAR 311 (422)
T ss_pred HHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchH-HHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 568 999999999999999888 99999999999999 9 6999999999887532110000 00
Q ss_pred --------ccc-c-c----C--CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCe
Q 008588 425 --------SKL-L-Q----I--PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDS 488 (560)
Q Consensus 425 --------~~~-~-p----v--~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~ 488 (560)
... . . | .+......-.++=.+.|.++++++|++..+|. |=-|.++|..+.+. .++++++-.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~ 388 (422)
T cd07080 312 LEAEFYELKGGVSRDLGWTVIISDEIGLEASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAA 388 (422)
T ss_pred HHHHHHHHhcCCCCCCCeEEEEeCCCCccCCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHH
Confidence 000 0 0 1 11101111233446788899999999999985 66799999988877 677777664
Q ss_pred ee
Q 008588 489 AA 490 (560)
Q Consensus 489 G~ 490 (560)
-.
T Consensus 389 ~G 390 (422)
T cd07080 389 AG 390 (422)
T ss_pred cC
Confidence 43
No 135
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=99.93 E-value=4e-26 Score=228.82 Aligned_cols=126 Identities=42% Similarity=0.650 Sum_probs=115.5
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehh--chHHHHhcCCCC
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRA--KHQAEITFGDKS 77 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~--~~~~~~~~~~~~ 77 (560)
|||+.-+..... ...+|||||+||+++|.+++||+|++||||||+||+|| +||||++|++++.. +++ .+..++++
T Consensus 132 VPIINENDtva~-~EikfGDND~LsA~VA~lv~ADlLvlLsDiDGLyd~nPr~~pdAk~i~~V~~it~ei~-~~aggsgs 209 (369)
T COG0263 132 VPIINENDTVAT-EEIKFGDNDTLSALVAILVGADLLVLLSDIDGLYDANPRTNPDAKLIPEVEEITPEIE-AMAGGSGS 209 (369)
T ss_pred eeeecCCCceee-eeeeecCCchHHHHHHHHhCCCEEEEEEccCcccCCCCCCCCCCeeehhhcccCHHHH-HHhcCCCC
Confidence 689988877665 47899999999999999999999999999999999999 79999999999854 444 46677889
Q ss_pred ccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 78 RVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 78 ~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.+|||||.+|+.||+.|.++|++++|++|..|+.+.++++++..||+|.+.
T Consensus 210 ~~GTGGM~TKl~AA~iA~~aG~~~iI~~g~~~~~i~~~~~~~~~GT~F~~~ 260 (369)
T COG0263 210 ELGTGGMRTKLEAAKIATRAGVPVIIASGSKPDVILDALEGEAVGTLFEPQ 260 (369)
T ss_pred CCCcccHHHHHHHHHHHHHcCCcEEEecCCCcchHHHHHhCCCCccEEecC
Confidence 999999999999999999999999999999999999999999999999987
No 136
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=99.89 E-value=1.8e-23 Score=211.80 Aligned_cols=124 Identities=56% Similarity=0.807 Sum_probs=109.0
Q ss_pred CCcccC-CccccCC------CC-CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHh
Q 008588 1 MPVSFD-NRNNFQD------SS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEIT 72 (560)
Q Consensus 1 ~Pv~~g-d~~~~~~------~~-~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~ 72 (560)
|||++| |++.+.. ++ ..|+|||++|+++|.+++||.|+++|||||||++||++|++++|++|+..+... +.
T Consensus 152 iPVi~~nD~v~~~~~~~~~~~~~~~i~d~D~lAa~lA~~l~Ad~Li~lTDVdGVy~~dP~~~~a~~I~~i~~~~~~~-~~ 230 (284)
T cd04256 152 IPIINTNDAVSPPPEPDEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPGSDDAKLIHTFYPGDQQS-IT 230 (284)
T ss_pred EEEEeCCCcccccccccccccccccccChHHHHHHHHHHcCCCEEEEEeCCCeeecCCCCCCCCeEcccccHhHHHH-hh
Confidence 699997 7777531 12 367999999999999999999999999999999999889999999999866653 43
Q ss_pred cCCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 73 FGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 73 ~~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
.+..+.++||||.+|++||..+.++|++++|++|++|+++.++++|+..||++
T Consensus 231 ~~~~s~~gtGGM~~Kl~Aa~~a~~~Gi~v~I~~G~~~~~i~~~l~G~~~GT~~ 283 (284)
T cd04256 231 FGTKSRVGTGGMEAKVKAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFF 283 (284)
T ss_pred cccccCcccCCcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHcCCCCCEEe
Confidence 44456789999999999999999999999999999999999999999899987
No 137
>PRK13402 gamma-glutamyl kinase; Provisional
Probab=99.89 E-value=2.6e-23 Score=217.00 Aligned_cols=125 Identities=34% Similarity=0.548 Sum_probs=111.5
Q ss_pred CCccc-CCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeeh--hchHHHHhcCCC
Q 008588 1 MPVSF-DNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~-gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~--~~~~~~~~~~~~ 76 (560)
|||++ ||.+.. .+..|+|||++|+++|.+++||.|+++|||||||++|| .+|++++|++|+. .++. .+..+++
T Consensus 130 IPIinenD~v~~--~el~~GdnD~lAa~vA~~l~Ad~LiilTDVdGvy~~dP~~~p~a~~I~~I~~i~~e~~-~l~~~~~ 206 (368)
T PRK13402 130 LPIINENDAVTT--DRLKVGDNDNLSAMVAALADADTLIILSDIDGLYDQNPRTNPDAKLIKQVTEINAEIY-AMAGGAG 206 (368)
T ss_pred EEEEeCCCcEee--cccccCChHHHHHHHHHHhCCCEEEEEecCCeEEeCCCCCCCCCEEEEEeccCcHHHH-HHhcccc
Confidence 69999 777655 36789999999999999999999999999999999999 5999999999986 3444 3444455
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
+.++||||.+|++||+.+.++|++++|+||+.|+.+.++++|+..||++.+.
T Consensus 207 s~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 258 (368)
T PRK13402 207 SNVGTGGMRTKIQAAKIAMSHGIETFIGNGFTADIFNQLLKGQNPGTYFTPE 258 (368)
T ss_pred cCcCcCCchHHHHHHHHHHHcCCcEEEEcCCCchHHHHHhcCCCCceEEecC
Confidence 6789999999999999999999999999999999999999999999999876
No 138
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=99.89 E-value=3.6e-23 Score=197.40 Aligned_cols=122 Identities=28% Similarity=0.381 Sum_probs=110.7
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
+||+||||++|.+.+..++|+|.++.++|+.+++|+++|+|||||||++|| +.|++..++++..... ..++.+.+
T Consensus 129 vPvl~GDVv~d~~~g~~IiSGDdIv~~LA~~l~pd~v~f~tdVdGVy~~~p~~~p~~~~l~~i~~~~~----~~gs~~~D 204 (252)
T COG1608 129 VPVLYGDVVPDDDNGYEIISGDDIVLHLAKELKPDRVIFLTDVDGVYDRDPGKVPDARLLSEIEGRVA----LGGSGGTD 204 (252)
T ss_pred EeeeecceEEcCCCceEEEeccHHHHHHHHHhCCCEEEEEecCCceecCCCCcCccccchhhhhhhhh----hcCcCccc
Confidence 699999999998767899999999999999999999999999999999999 5999998888765321 24556679
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
+||||..|++++....+++.+|+|+||++|++|..++.|+.+||.+.
T Consensus 205 VTGGi~~Kl~~~~~~~~~~~~vyi~ng~~~~ni~~~l~G~~vGT~I~ 251 (252)
T COG1608 205 VTGGIAKKLEALLEIARYGKEVYIFNGNKPENIYRALRGENVGTRID 251 (252)
T ss_pred chhhHHHHHHHHHHHHhcCceEEEECCCCHHHHHHHhcCCCCceEec
Confidence 99999999999999999999999999999999999999999999875
No 139
>PTZ00489 glutamate 5-kinase; Provisional
Probab=99.88 E-value=8.3e-23 Score=204.36 Aligned_cols=125 Identities=32% Similarity=0.512 Sum_probs=105.2
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCce---eeeeehhchHHHHhcCCC
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKL---IHTYIRAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~---i~~i~~~~~~~~~~~~~~ 76 (560)
|||++|+..... ....|+|||++|+++|.+++||+|+++|||||||++|| ++|+|++ |++++.+++.. ..++.
T Consensus 130 VPIinend~~~~-~e~~~gdnD~lAa~lA~~l~Ad~LiilTDVdGVy~~dP~~~~~A~~~~~i~~i~~~~~~~--~~~~~ 206 (264)
T PTZ00489 130 IPIINENDATAL-HELVFGDNDRLSALVAHHFKADLLVILSDIDGYYTENPRTSTDAKIRSVVHELSPDDLVA--EATPN 206 (264)
T ss_pred EEEECCCCCccc-ceeEeCChHHHHHHHHHHhCCCEEEEeeccCeeEcCCCCCCCccceeeeeccCCHHHHHH--hcCcC
Confidence 699999754443 24678999999999999999999999999999999999 6899998 55555554432 23445
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCC--ceeeEEecC
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGK--RVGTLFHRD 128 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~--~~GT~~~~~ 128 (560)
+.++||||.+|++||+.+.++|++++|++|++|+.+.+++.|+ ..||+|.+.
T Consensus 207 ~~~~tGGM~~Kl~aa~~a~~~Gi~v~I~~g~~~~~i~~~l~g~~~~~GT~~~~~ 260 (264)
T PTZ00489 207 NRFATGGIVTKLQAAQFLLERGGKMYLSSGFHLEKARDFLIGGSHEIGTLFYPR 260 (264)
T ss_pred CCcccCChHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHcCCCCCCceEEeec
Confidence 6789999999999999999999999999999999999999764 479999764
No 140
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=99.88 E-value=1.2e-22 Score=204.63 Aligned_cols=127 Identities=36% Similarity=0.591 Sum_probs=107.1
Q ss_pred CCcccCC-ccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeeh--hchHHHHhcCCC
Q 008588 1 MPVSFDN-RNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd-~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~--~~~~~~~~~~~~ 76 (560)
|||++++ .+.....+..|+|||++|+++|.+++||.|+|+|||||||++|| ++|+|++|++|+. .+.. .+...+.
T Consensus 135 IPVv~~nd~v~~~~~~~~~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~~~a~~i~~I~~~~~~~~-~~~~~~~ 213 (266)
T PRK12314 135 LPIVNENDAVATDEIDTKFGDNDRLSAIVAKLVKADLLIILSDIDGLYDKNPRINPDAKLRSEVTEITEEIL-ALAGGAG 213 (266)
T ss_pred EEEEcCCCCeeeccccceecchHHHHHHHHHHhCCCEEEEEeCCCcccCCCCCCCCCCeEEEEecCCCHHHH-HHhccCC
Confidence 6999974 44332224458999999999999999999999999999999999 5899999999985 3333 2333445
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
+.++||||.+|+++++.+.++|++++|+||++|+++.++++|+..||++.+.
T Consensus 214 ~~~~tGGM~~Kl~aa~~a~~~gv~v~I~~g~~~~~i~~~l~g~~~GT~i~~~ 265 (266)
T PRK12314 214 SKFGTGGMVTKLKAAKFLMEAGIKMVLANGFNPSDILDFLEGESIGTLFAPK 265 (266)
T ss_pred CCcccCchHHHHHHHHHHHHCCCeEEEEcCCCchHHHHHHcCCCCceEEccC
Confidence 5689999999999999999999999999999999999999998899999764
No 141
>TIGR01027 proB glutamate 5-kinase. Bacterial ProB proteins hit the full length of this model, but the ProB-like domain of delta 1-pyrroline-5-carboxylate synthetase does not hit the C-terminal 100 residues of this model. The noise cutoff is set low enough to hit delta 1-pyrroline-5-carboxylate synthetase and other partial matches to this family.
Probab=99.88 E-value=1.4e-22 Score=212.27 Aligned_cols=126 Identities=41% Similarity=0.612 Sum_probs=111.4
Q ss_pred CCccc-CCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhc-hHHHHhcCCCC
Q 008588 1 MPVSF-DNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAK-HQAEITFGDKS 77 (560)
Q Consensus 1 ~Pv~~-gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~-~~~~~~~~~~~ 77 (560)
|||++ +|.+..+ ...|+|||++|+++|.+++||.|+|+|||||||++|| ++|+|++|++|+..+ ....+..++++
T Consensus 126 iPVi~end~v~~~--~l~~gd~D~lAa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~A~~I~~i~~~~~~~~~i~~~~~~ 203 (363)
T TIGR01027 126 VPIINENDTVATE--EIKFGDNDTLSALVAILVGADLLVLLTDVDGLYDADPRTNPDAKLIPVVEEITDLLLGVAGDSGS 203 (363)
T ss_pred EEEEeCCCceeee--ecCcCChHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEEEEeccCcHHHHHhhcCCCc
Confidence 69998 8877653 5668999999999999999999999999999999999 699999999998643 22245555556
Q ss_pred ccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 78 RVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 78 ~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.++||||.+|++|++.+.++|++++|+||++|+++.++++|+..||++.+.
T Consensus 204 ~~gtGGM~~Kl~Aa~~a~~~gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 254 (363)
T TIGR01027 204 SVGTGGMRTKLQAADLATRAGVPVIIASGSKPEKIADALEGAPVGTLFHAQ 254 (363)
T ss_pred CcCcCCchHHHHHHHHHHHCCCeEEEEeCCCccHHHHHhcCCCCcEEEeeC
Confidence 799999999999999999999999999999999999999999899999876
No 142
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=99.87 E-value=4.6e-22 Score=199.16 Aligned_cols=122 Identities=43% Similarity=0.644 Sum_probs=108.3
Q ss_pred CCcccC-CccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeee--hhchHHHHhcCCC
Q 008588 1 MPVSFD-NRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYI--RAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~g-d~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~--~~~~~~~~~~~~~ 76 (560)
|||+++ |++.+. ...++|+|++|+++|.+++||.|+|+|||||||++|| .+|++++|++|+ .+++.. +..+..
T Consensus 125 iPVv~~~d~v~~~--~~~~~~~D~~A~~lA~~l~Ad~liilTDVdGvy~~dP~~~~~a~~i~~i~~~~~e~~~-~~~~~~ 201 (251)
T cd04242 125 IPIINENDTVATE--EIRFGDNDRLSALVAGLVNADLLILLSDVDGLYDKNPRENPDAKLIPEVEEITDEIEA-MAGGSG 201 (251)
T ss_pred EEEEcCCCCeeee--ccccCChHHHHHHHHHHcCCCEEEEecCcCEEEeCCCCCCCCCeEEEEecCChHHHHH-HhcccC
Confidence 699995 766653 3568899999999999999999999999999999999 589999999999 777764 433445
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
+.+++|||.+|++++..+.++|++++|+||+.|+++.++++|+..||++
T Consensus 202 ~~~~tggm~~Kl~a~~~a~~~gi~v~I~~g~~~~~i~~~l~g~~~GT~i 250 (251)
T cd04242 202 SSVGTGGMRTKLKAARIATEAGIPVVIANGRKPDVLLDILAGEAVGTLF 250 (251)
T ss_pred cCcccCCcHHHHHHHHHHHHCCCcEEEEcCCCCCHHHHHHcCCCCCeEe
Confidence 6799999999999999999999999999999999999999998899986
No 143
>PRK05429 gamma-glutamyl kinase; Provisional
Probab=99.87 E-value=4.6e-22 Score=209.29 Aligned_cols=125 Identities=42% Similarity=0.638 Sum_probs=110.7
Q ss_pred CCccc-CCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeeh--hchHHHHhcCCC
Q 008588 1 MPVSF-DNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIR--AKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~-gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~--~~~~~~~~~~~~ 76 (560)
|||++ +|.+.+. ...|+|||++|+++|.+++||.|+|+|||||||++|| ++|++++|++|+. .++.. +..+++
T Consensus 134 IPVi~~nd~v~~~--~l~~gd~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dP~~~p~a~~I~~i~~~~~e~~~-~~~~~~ 210 (372)
T PRK05429 134 VPIINENDTVATD--EIKFGDNDTLSALVANLVEADLLILLTDVDGLYTADPRKNPDAKLIPEVEEITDELEA-MAGGAG 210 (372)
T ss_pred EEEEcCCCcccee--cccccChHHHHHHHHHHcCCCEEEEecCCCeeEcCCCCCCCCceEEEEeccCCHHHHH-HhcCCC
Confidence 69999 5766653 3568999999999999999999999999999999999 5899999999987 34553 444455
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
+.++||||.+|++|+..+.++|++++|+||++|+++.+++.|+..||++.+.
T Consensus 211 ~~~gtGGM~~Kl~aa~~a~~~Gi~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 262 (372)
T PRK05429 211 SGLGTGGMATKLEAARIATRAGIPVVIASGREPDVLLRLLAGEAVGTLFLPQ 262 (372)
T ss_pred CCcCcCCcHHHHHHHHHHHHCCCeEEEEcCCCccHHHHHhcCCCCCEEEeeC
Confidence 6799999999999999999999999999999999999999998899999876
No 144
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.86 E-value=6.1e-22 Score=198.57 Aligned_cols=123 Identities=27% Similarity=0.383 Sum_probs=108.7
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhc-CCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF-GDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~-~~~~~~ 79 (560)
|||++||++.+.+.+..++|+|++|+.+|.+++||.|+++|||||||++|| |++++|++++.+++++.+.. ++++.+
T Consensus 129 iPVi~~~~~~~~~~~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~P--~~~~~i~~i~~~~~~~~~~~~~~~~~~ 206 (252)
T cd04241 129 VPVLHGDVVLDEGGGITILSGDDIVVELAKALKPERVIFLTDVDGVYDKPP--PDAKLIPEIDVGSLEDILAALGSAGTD 206 (252)
T ss_pred EEEEcCCeEecCCCCeEEeChHHHHHHHHHHcCCCEEEEEeCCCeeECCCC--CCCeEcceeCccchHHHHHhcCcCCcc
Confidence 699999988886444568999999999999999999999999999999999 88999999999777653321 233568
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
+||||.+|+++|..++++|++++|+||++|+.+.++++|+..||++
T Consensus 207 ~tGGm~~Kl~aa~~a~~~Gv~v~I~~g~~~~~l~~~l~g~~~GT~i 252 (252)
T cd04241 207 VTGGMAGKIEELLELARRGIEVYIFNGDKPENLYRALLGNFIGTRI 252 (252)
T ss_pred ccCCHHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHcCCCCceEC
Confidence 9999999999999999999999999999999999999999889974
No 145
>KOG1154 consensus Gamma-glutamyl kinase [Amino acid transport and metabolism]
Probab=99.84 E-value=2.5e-21 Score=182.58 Aligned_cols=130 Identities=51% Similarity=0.753 Sum_probs=113.3
Q ss_pred CCcccCCccccCCCCCceec---hhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCC
Q 008588 1 MPVSFDNRNNFQDSSGIFWD---NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKS 77 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~---~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~ 77 (560)
|||+.-+..... ....|+| ||++|+.+|.+++||+||+||||||+|+.+|....+++|+..+..+-...+.++++|
T Consensus 147 iPIvNeNDavs~-~~~~~~D~~dNDsLsA~laaei~ADlLilLsDVdglYt~PPd~~~~~li~~~~~~~~~v~~tfG~~S 225 (285)
T KOG1154|consen 147 IPIVNENDAVSP-REIPFGDSSDNDSLAAILAAEIKADLLILLSDVDGLYTGPPDADPSKLIHTFSPGDPQVSTTFGSKS 225 (285)
T ss_pred eeeecCCCccCC-cccccCCCCcccHHHHHHHHHhccCEEEEEecccccccCCCCCCcceeeeeeccCCCCCccccCccC
Confidence 688887777665 3566777 999999999999999999999999999977765558999988877665346678899
Q ss_pred ccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecCCCc
Q 008588 78 RVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDAHL 131 (560)
Q Consensus 78 ~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~~~~ 131 (560)
.+|||||.+|+.||..|...|++|+|++|..|++|.+++.|...||.|...++.
T Consensus 226 kvGtGGM~tKv~AA~~A~~~Gv~viI~~g~~p~~I~~iv~g~kvgt~f~~~~~~ 279 (285)
T KOG1154|consen 226 KVGTGGMETKVKAAVNALNAGVSVIITNGDAPENITDIVEGKKVGTFFEQLKRL 279 (285)
T ss_pred ccCcCcchhhHHHHHHHhcCCceEEEeCCCChHHHHHHHhhhhhhhhhhhcccc
Confidence 999999999999999999999999999999999999999999999988776443
No 146
>TIGR02076 pyrH_arch uridylate kinase, putative. This family consists of the archaeal and spirochete proteins most closely related to bacterial uridylate kinases (TIGR02075), an enzyme involved in pyrimidine biosynthesis. Members are likely, but not known, to be functionally equivalent to their bacterial counterparts. However, substantial sequence differences suggest that regulatory mechanisms may be different; the bacterial form is allosterically regulated by GTP.
Probab=99.78 E-value=5.2e-19 Score=173.89 Aligned_cols=114 Identities=28% Similarity=0.347 Sum_probs=99.5
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
+||++|+. ...|||++|+++|.+++||.|+++|||||||++|| ++|++++|++|+++++.+ +... ...
T Consensus 105 ipv~~G~~--------~~~s~D~~A~~lA~~l~A~~li~ltdVdGvy~~dP~~~~~a~~i~~i~~~e~~~-~~~~--~~~ 173 (221)
T TIGR02076 105 IVVMGGTH--------PGHTTDAVAALLAEFSKADLLINATNVDGVYDKDPKKDPDAKKFDKLTPEELVE-IVGS--SSV 173 (221)
T ss_pred EEEEcCCC--------CCCCcHHHHHHHHHHcCCCEEEEEeCCCcccCCCCCCCCCCeEeeEECHHHHHH-HhcC--CCc
Confidence 58999974 13689999999999999999999999999999999 689999999999888775 3321 245
Q ss_pred ccC-ChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 80 GRG-GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tg-gM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
++| +|..|+.+++.+.+.|++++|+||++|+++.++++|+..||++
T Consensus 174 ~~g~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 220 (221)
T TIGR02076 174 KAGSNEVVDPLAAKIIERSKIRTIVVNGRDPENLEKVLKGEHVGTII 220 (221)
T ss_pred cCCCCceeHHHHHHHHHHCCCcEEEECCCCccHHHHHHCCCCCCeEe
Confidence 677 6788999999999999999999999999999999998889986
No 147
>cd04253 AAK_UMPK-PyrH-Pf AAK_UMPK-PyrH-Pf: UMP kinase (UMPK)-Pf, the mostly archaeal uridine monophosphate kinase (uridylate kinase) enzymes that catalyze UMP phosphorylation and play a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of Pyrococcus furiosus (Pf) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs (this CD) appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of thi
Probab=99.76 E-value=2.2e-18 Score=169.33 Aligned_cols=114 Identities=26% Similarity=0.331 Sum_probs=97.5
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
+||++||.- ..+||++|+++|.+++||.|+++|||||||++|| ++|++++|++|+++++.+ +..... .
T Consensus 105 vpv~~G~~~--------~~s~D~~a~~lA~~l~a~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~-~~~~~~--~ 173 (221)
T cd04253 105 IVVMGGTEP--------GQSTDAVAALLAERLGADLLINATNVDGVYSKDPRKDPDAKKFDRLSADELID-IVGKSS--W 173 (221)
T ss_pred eEEEECCCC--------CCccHHHHHHHHHHcCCCEEEEEeCCCeeECCCCCCCCCCeEeeEeCHHHHHH-HccCCC--c
Confidence 589999741 2589999999999999999999999999999999 599999999999888775 332211 2
Q ss_pred ccCC-hHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 80 GRGG-MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tgg-M~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
..|+ |..|+.+++.+.++|++++|+||++|+++.++++|+..||++
T Consensus 174 ~~g~~~~~d~~a~~~~~~~gi~~~I~~g~~p~~l~~~l~g~~~GT~I 220 (221)
T cd04253 174 KAGSNEPFDPLAAKIIERSGIKTIVVDGRDPENLERALKGEFVGTII 220 (221)
T ss_pred CCCCCcchHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCeEe
Confidence 2333 678999999999999999999999999999999999899986
No 148
>PRK14058 acetylglutamate/acetylaminoadipate kinase; Provisional
Probab=99.75 E-value=2.7e-18 Score=173.50 Aligned_cols=116 Identities=33% Similarity=0.444 Sum_probs=99.4
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||++|+ +.+.+....++|+|.+|+.+|.+++||.|+|+|||||||++||+ ++++|++++.+++.+ +. .++
T Consensus 151 iPVi~~~-~~~~~g~~~~i~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~--~~~~i~~i~~~e~~~-l~-----~~~ 221 (268)
T PRK14058 151 LPVVAPP-ALSEEGEPLNVDGDRAAAAIAGALKAEALVLLSDVPGLLRDPPD--EGSLIERITPEEAEE-LS-----KAA 221 (268)
T ss_pred EEEEeCc-eECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhhccCCCC--CCcCccCcCHHHHHH-Hh-----hcc
Confidence 6999996 45543224569999999999999999999999999999999883 478999999888765 32 258
Q ss_pred cCChHHHHHHHHHHHHCCC-cEEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 81 RGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi-~v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
||||.+|+++|..+.++|+ +++|+||+.|+++...++|+ ||++.+
T Consensus 222 tGgM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~l~~~l~G~--GT~I~~ 267 (268)
T PRK14058 222 GGGMKKKVLMAAEAVEGGVGRVIIADANVDDPISAALAGE--GTVIVN 267 (268)
T ss_pred CCccHHHHHHHHHHHHcCCCEEEEEcCCCcchHHHHhCCC--ceEEec
Confidence 9999999999999999999 69999999999999988875 998864
No 149
>PRK12353 putative amino acid kinase; Reviewed
Probab=99.75 E-value=2.6e-18 Score=176.54 Aligned_cols=119 Identities=26% Similarity=0.326 Sum_probs=97.6
Q ss_pred CCcccCC----ccccCCC--C-CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDN----RNNFQDS--S-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd----~~~~~~~--~-~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||++|+ ++.+.+. + ..|+|||++|+++|.+++||+||++|||||||++|| +|++++|++|+..++...+..
T Consensus 187 IpV~~g~gg~Pi~~~~~~~~~~~~~~d~D~lAa~lA~~l~Ad~Li~lTdvdGVy~~~~-~~~a~~i~~i~~~e~~~~~~~ 265 (314)
T PRK12353 187 VVIAAGGGGIPVIREGGGLKGVEAVIDKDFASAKLAELVDADLLIILTAVDKVYINFG-KPNQKKLDEVTVSEAEKYIEE 265 (314)
T ss_pred EEEEcCCCCCCEEEeCCceeeeeEecCHHHHHHHHHHHhCCCEEEEEeCCccccCCCC-CCCCeECcCcCHHHHHHHHhc
Confidence 6899988 4333110 1 137999999999999999999999999999999766 689999999998777653321
Q ss_pred CCCCccccCChHHHHHHHHHHH--HCCCcEEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAA--CAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~--~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
+.+++|||.+|+++|..+. +.|++++|++ ++++.+++.|+ .||++.+
T Consensus 266 ---~~~~tGGM~~Kl~aA~~a~~~~~g~~v~I~~---~~~i~~~l~g~-~GT~i~~ 314 (314)
T PRK12353 266 ---GQFAPGSMLPKVEAAISFVESRPGRKAIITS---LEKAKEALEGK-AGTVIVK 314 (314)
T ss_pred ---CCcCCCCcHHHHHHHHHHHHHcCCCEEEECC---chHHHHHhCCC-CCeEecC
Confidence 3578999999999999988 6789999997 78888889888 8998853
No 150
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.75 E-value=2.4e-18 Score=172.38 Aligned_cols=118 Identities=22% Similarity=0.211 Sum_probs=96.9
Q ss_pred CCcccCCccccC-----CCC-CceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDNRNNFQ-----DSS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd~~~~~-----~~~-~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||++|++..+. ..+ ..|+|||++|+++|.+++||.|+++|||||||++|| ++|++++|++|+..++.. +..
T Consensus 137 vPVi~g~~~~~~~~i~~~~g~~~~~~~D~~Aa~lA~~l~ad~li~~TdVdGVy~~dP~~~~~a~~i~~i~~~~~~~-~~~ 215 (262)
T cd04255 137 APVISGMPPYGLWEHPAEEGRIPPHRTDVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLK-KDL 215 (262)
T ss_pred eEEEeCCcCCCeeeecCCCccCCCCCcHHHHHHHHHHhCCCEEEEEeccCeeECCCCCCCCCCeEccEeCHHHHHH-Hhc
Confidence 699999965432 123 458999999999999999999999999999999999 589999999999877654 321
Q ss_pred CCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
. ....++||.+|+++++. .++++|+||++|+++.+++.|+..||++
T Consensus 216 ~--~~~~~~~~~~~l~aa~~----~~~v~I~~g~~~~~L~~~l~g~~~GT~i 261 (262)
T cd04255 216 D--DLVLERPVLDLLQNARH----VKEVQIVNGLVPGNLTRALRGEHVGTII 261 (262)
T ss_pred C--CCCCcHHHHHHHHHhCC----CCcEEEEeCCCCCHHHHHHcCCCCceEe
Confidence 1 11258899999887643 2689999999999999999999899986
No 151
>PRK12686 carbamate kinase; Reviewed
Probab=99.75 E-value=3e-18 Score=173.95 Aligned_cols=118 Identities=25% Similarity=0.324 Sum_probs=96.8
Q ss_pred CCcccCC----ccccCCC--CC-ceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDN----RNNFQDS--SG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd----~~~~~~~--~~-~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||.+|+ ++.+.+. +. .|+|+|++|+++|.+++||+|||||||||||++ |++|++++|++++.+++...+..
T Consensus 185 IpI~~GgggIPVv~~~~~~~gv~avid~D~~Aa~LA~~L~Ad~LIiLTDVdGVy~~-~~~p~ak~I~~I~~~e~~~li~~ 263 (312)
T PRK12686 185 IVIACGGGGIPVIRDDNTLKGVEAVIDKDFASEKLAEQIDADLLIILTGVENVFIN-FNKPNQQKLDDITVAEAKQYIAE 263 (312)
T ss_pred EEEEeCCCCCCeEecCCcEEeeecccCccHHHHHHHHHcCCCEEEEEeCchhhccC-CCCCCCeECCccCHHHHHHHhhC
Confidence 5778877 4444321 22 389999999999999999999999999999995 66789999999999888764432
Q ss_pred CCCCccccCChHHHHHHHHHHHHC--CCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAACA--GIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~~~--gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
+.+++|||.+|++||..+++. |.+++|++ ++.+.+++.|+ .||++.
T Consensus 264 ---g~~~tGGM~pKveAA~~av~~g~g~~viI~~---~~~i~~aL~G~-~GT~I~ 311 (312)
T PRK12686 264 ---GQFAPGSMLPKVEAAIDFVESGEGKKAIITS---LEQAKEALAGN-AGTHIT 311 (312)
T ss_pred ---CCccCCCcHHHHHHHHHHHHhCCCCEEEEeC---chHHHHHhCCC-CCeEEe
Confidence 357899999999999999975 56799987 78888888887 799874
No 152
>PRK14558 pyrH uridylate kinase; Provisional
Probab=99.74 E-value=3.7e-18 Score=168.87 Aligned_cols=110 Identities=27% Similarity=0.427 Sum_probs=95.8
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||++|+. +..+++||++|+++|..++||.|+++|||||||++|| ++|+|++|++|++.|+.+ + +
T Consensus 120 vpV~~G~~------~~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~-~--g----- 185 (231)
T PRK14558 120 IVIFAGGT------SNPFFTTDTAAALRAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIK-M--G----- 185 (231)
T ss_pred EEEEECCC------CCCCCCcHHHHHHHHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHH-c--C-----
Confidence 68999973 4568899999999999999999999999999999999 599999999999877753 1 1
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
.. ..+..++..|.++|++++|+||++|+++.+++.|+..||++.+
T Consensus 186 -~~--~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 230 (231)
T PRK14558 186 -LK--VMDTEAFSICKKYGITILVINFFEPGNLLKALKGENVGTLVVP 230 (231)
T ss_pred -cc--cccHHHHHHHHHCCCCEEEEeCCCCCHHHHHHCCCCCcEEeCC
Confidence 12 2356888899999999999999999999999999999999865
No 153
>PRK00358 pyrH uridylate kinase; Provisional
Probab=99.74 E-value=6.6e-18 Score=167.18 Aligned_cols=108 Identities=23% Similarity=0.365 Sum_probs=93.9
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||++|. .+..++|||++|+++|.+++||.|+++|||||||++|| ++|+|++|++|+++++.. +
T Consensus 122 vPVv~g~------~~~~~~ssD~~A~~lA~~l~A~~li~~tdVdGVy~~dP~~~~~a~~i~~i~~~e~~~-~-------- 186 (231)
T PRK00358 122 VVIFAAG------TGNPFFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKDPDAKKYDRLTYDEVLE-K-------- 186 (231)
T ss_pred EEEEECC------CCCCCCCchHHHHHHHHHcCCCEEEEeeCcCceEcCCCCCCCCCEEeeEecHHHHHH-c--------
Confidence 5888763 24457899999999999999999999999999999999 589999999999876543 1
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
|....|+++++.+.++|++++|+||++|+++.++++|+..||++
T Consensus 187 --g~~~~d~~a~~~a~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 230 (231)
T PRK00358 187 --GLKVMDATAISLARDNKIPIIVFNMNKPGNLKRVVKGEHIGTLV 230 (231)
T ss_pred --CCcchhHHHHHHHHHcCCcEEEECCCCchHHHHHHCCCCCCEEe
Confidence 23346889999999999999999999999999999999899987
No 154
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=99.73 E-value=5.8e-18 Score=167.29 Aligned_cols=108 Identities=22% Similarity=0.340 Sum_probs=95.7
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||++|+. +..+++||++|+++|.+++||.|+++|||||||++|| .+|++++|++|+++++.+ +.
T Consensus 120 ipVi~g~~------g~~~~~sD~~A~~lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~-~~------- 185 (229)
T cd04239 120 IVIFGGGT------GNPGFTTDTAAALRAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLK-KG------- 185 (229)
T ss_pred EEEEeCcc------CCCCCCcHHHHHHHHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHH-Hh-------
Confidence 69999986 4456799999999999999999999999999999999 589999999999877764 21
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
.|..|+.+++.+.++|++++|+||++|+++.++++|+..||++
T Consensus 186 ---~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~g~~~GT~i 228 (229)
T cd04239 186 ---LKVMDATALTLCRRNKIPIIVFNGLKPGNLLRALKGEHVGTLI 228 (229)
T ss_pred ---cCCccHHHHHHHHHCCCeEEEECCCChhHHHHHHcCCCCCeEe
Confidence 1566788899999999999999999999999999998889986
No 155
>cd04250 AAK_NAGK-C AAK_NAGK-C: N-Acetyl-L-glutamate kinase - cyclic (NAGK-C) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in some bacteria and photosynthetic organisms using the non-acetylated, cyclic route of ornithine biosynthesis. In this pathway, glutamate is first N-acetylated and then phosphorylated by NAGK to give phosphoryl NAG, which is converted to NAG-ornithine. There are two variants of this pathway. In one, typified by the pathway in Thermotoga maritima and Pseudomonas aeruginosa, the acetyl group is recycled by reversible transacetylation from acetylornithine to glutamate. The phosphorylation of NAG by NAGK is feedback inhibited by arginine. In photosynthetic organisms, NAGK is the target of the nitrogen-signaling protein PII. Hexameric formation of NAGK domains appears to be essential to both arginine inhibition and NAGK-PII complex formation. NAGK-C are members of the Amino A
Probab=99.73 E-value=6.6e-18 Score=171.72 Aligned_cols=117 Identities=28% Similarity=0.417 Sum_probs=100.6
Q ss_pred CCcccCCccccCCCCC-ceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||++| +..+.. +. .++|+|++|+++|.+++||.|+++|||||||++||+ | +++|++++.+++.+ +.. +.+
T Consensus 160 IPVi~~-~~~~~~-g~~~~~~~D~~A~~lA~~l~A~~li~ltdv~Gv~~~~p~-~-~~~i~~i~~~e~~~-l~~---~~~ 231 (279)
T cd04250 160 IPVIAP-VGVGED-GETYNINADTAAGAIAAALKAEKLILLTDVAGVLDDPND-P-GSLISEISLKEAEE-LIA---DGI 231 (279)
T ss_pred eEEEcC-CccCCC-CcEEEeCHHHHHHHHHHHhCCCEEEEEECCcccccCCCC-C-ccccccCCHHHHHH-HHH---cCC
Confidence 699998 677754 44 458999999999999999999999999999999883 3 79999999988875 332 347
Q ss_pred ccCChHHHHHHHHHHHHCCCc-EEEEeCCCCch-hhhhhcCCceeeEE
Q 008588 80 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~-i~~~~~G~~~GT~~ 125 (560)
+||||.+|+++|..+++.|++ |+|+||++|+. +.++++++..||++
T Consensus 232 ~tGgm~~Kl~~a~~a~~~g~~~v~I~~g~~~~~ll~~~~~~~~~GT~i 279 (279)
T cd04250 232 ISGGMIPKVEACIEALEGGVKAAHIIDGRVPHSLLLEIFTDEGIGTMI 279 (279)
T ss_pred CCCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCCccCC
Confidence 899999999999999999987 99999999996 47788888889864
No 156
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=99.72 E-value=4.7e-18 Score=169.84 Aligned_cols=116 Identities=33% Similarity=0.392 Sum_probs=102.7
Q ss_pred CCcccCCccccC--CCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCC
Q 008588 1 MPVSFDNRNNFQ--DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKS 77 (560)
Q Consensus 1 ~Pv~~gd~~~~~--~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~ 77 (560)
|||++|+...+. .....++++|++|+.+|.+++||.|+++|||||||++|| ++|++++|++|+++++.+ +.
T Consensus 130 ipVv~g~~~~~~~~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~a~~i~~i~~~e~~~-l~----- 203 (248)
T cd02115 130 LPILSGFGGTDEKETGTLGRGGSDSTAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAE-LA----- 203 (248)
T ss_pred EEEecCeEeccCCceeeecCCCHHHHHHHHHHHcCCCEEEEEecCCeeecCCCCcCCcCeECCcCCHHHHHH-HH-----
Confidence 699999988774 223457999999999999999999999999999999999 589999999999988775 32
Q ss_pred ccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 78 RVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 78 ~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
.+|+|..|++++..+.++|++++|+|+++|+.+ ++++++..||++
T Consensus 204 --~~g~~~~k~~a~~~~~~~~~~v~I~~~~~~~~l-~~~~~~~~GT~I 248 (248)
T cd02115 204 --YAGAMVLKPKAADPAARAGIPVRIANTENPGAL-ALFTPDGGGTLI 248 (248)
T ss_pred --HcCCCccCHHHHHHHHHcCCcEEEEeCCCcccc-cccCCCCCCCCC
Confidence 257799999999999999999999999999999 989888889864
No 157
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=99.72 E-value=1.8e-17 Score=168.72 Aligned_cols=118 Identities=26% Similarity=0.420 Sum_probs=100.5
Q ss_pred CCcccCCccccCCCCCce-echhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~-~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||+++ +..|.+ +..+ +|+|++|+.+|.+++||.|+|+|||||||+++ .+| .++|++++.+++++.+ . +.+
T Consensus 163 iPVi~~-~~~~~~-g~~~ni~~D~~A~~lA~~l~Ad~li~lTdv~Gv~~~~-~d~-~~~i~~i~~~e~~~l~-~---~g~ 234 (284)
T CHL00202 163 IPVIAS-VAADHD-GQTYNINADVVAGEIAAKLNAEKLILLTDTPGILADI-NDP-NSLISTLNIKEARNLA-S---TGI 234 (284)
T ss_pred EEEECC-CccCCC-CcEEecCHHHHHHHHHHHhCCCEEEEEeCChhhcCCC-CCC-CCccccccHHHHHHHH-h---cCC
Confidence 699998 677764 6554 79999999999999999999999999999853 345 4799999988877533 2 347
Q ss_pred ccCChHHHHHHHHHHHHCCCc-EEEEeCCCCch-hhhhhcCCceeeEEe
Q 008588 80 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFH 126 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~-i~~~~~G~~~GT~~~ 126 (560)
+||||.+|+++|..+.++|++ ++|+||+.|+. +.++++++..||++.
T Consensus 235 ~tGGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~el~~~~g~GT~i~ 283 (284)
T CHL00202 235 ISGGMIPKVNCCIRALAQGVEAAHIIDGKEKHALLLEILTEKGIGSMLV 283 (284)
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCChHHHHHhcCCCCceEEe
Confidence 899999999999999999997 89999999997 588999888999874
No 158
>PRK14556 pyrH uridylate kinase; Provisional
Probab=99.72 E-value=2.1e-17 Score=162.72 Aligned_cols=111 Identities=19% Similarity=0.226 Sum_probs=93.5
Q ss_pred CCccccC-CCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCccccCC
Q 008588 6 DNRNNFQ-DSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGG 83 (560)
Q Consensus 6 gd~~~~~-~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tgg 83 (560)
|.++... ..|..|++||++|+++|.+++||+|+++||||||||+|| ++|+|++|++|++.+... . . ..
T Consensus 136 g~vvi~~gg~G~p~~StD~lAallA~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~---~---~---l~- 205 (249)
T PRK14556 136 GRVLIFAGGTGNPFVTTDTTASLRAVEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVS---K---E---LN- 205 (249)
T ss_pred CCEEEEECCCCCCcCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcc---c---c---hH-
Confidence 5555533 235679999999999999999999999999999999999 699999999999876642 1 0 11
Q ss_pred hHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 84 MTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 84 M~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
..+..|++.+.++|+|++|+||++|++|.+++.|+..||++..
T Consensus 206 -vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~Ge~~GT~i~~ 248 (249)
T PRK14556 206 -VMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVLDSKYGTWVTL 248 (249)
T ss_pred -hHHHHHHHHHHHCCCcEEEECCCCchHHHHHHcCCCCceEEEe
Confidence 3356789999999999999999999999999999999999853
No 159
>PLN02512 acetylglutamate kinase
Probab=99.71 E-value=3.6e-17 Score=168.22 Aligned_cols=118 Identities=25% Similarity=0.323 Sum_probs=100.1
Q ss_pred CCcccCCccccCCCCCc-eechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~-~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||++|. ..|.. +.. .+|+|++|+.+|.+|+||.|+++|||||||++|| +++++|++|+.+++.+.+. ..+
T Consensus 188 IPVi~~~-~~d~~-g~~~~i~~D~~A~~lA~~L~Ad~li~lTdV~GV~~~~~--~~~~lI~~i~~~e~~~l~~----~~~ 259 (309)
T PLN02512 188 IPVIATV-AADED-GQAYNINADTAAGEIAAALGAEKLILLTDVAGVLEDKD--DPGSLVKELDIKGVRKLIA----DGK 259 (309)
T ss_pred EEEEeCc-eECCC-CCEeccCHHHHHHHHHHHcCCCEEEEEeCCcceeCCCC--CCcCCCcccCHHHHHHHHh----CCC
Confidence 6999995 66653 443 4799999999999999999999999999999864 3478999999888875332 347
Q ss_pred ccCChHHHHHHHHHHHHCCCc-EEEEeCCCCchh-hhhhcCCceeeEEe
Q 008588 80 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 126 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~i-~~~~~G~~~GT~~~ 126 (560)
+||||.+|+++|..+.+.|++ ++|+||+.|+.+ .++++++..||++.
T Consensus 260 vtGGM~~Kl~aa~~a~~~Gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~ 308 (309)
T PLN02512 260 IAGGMIPKVECCVRSLAQGVKTAHIIDGRVPHSLLLEILTDEGAGTMIT 308 (309)
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEecCCCCChHHHHHhcCCCCeeEEe
Confidence 999999999999999999996 899999999886 56788888899875
No 160
>cd04235 AAK_CK AAK_CK: Carbamate kinase (CK) catalyzes both the ATP-phosphorylation of carbamate and carbamoyl phosphate (CP) utilization with the production of ATP from ADP and CP. Both CK (this CD) and nonhomologous CP synthetase synthesize carbamoyl phosphate, an essential precursor of arginine and pyrimidine bases, in the presence of ATP, bicarbonate, and ammonia. CK is a homodimer of 33 kDa subunits and is a member of the Amino Acid Kinase Superfamily (AAK).
Probab=99.70 E-value=2.2e-17 Score=167.57 Aligned_cols=117 Identities=30% Similarity=0.386 Sum_probs=96.2
Q ss_pred CCcccCC----ccccCC--CC-CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDN----RNNFQD--SS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd----~~~~~~--~~-~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||++|+ ++.+.+ .+ ..++|+|++|+++|.+++||.|+++|||||||+++ ++|++++|++|+.+++...+..
T Consensus 183 IpI~~GggGiPv~~~~~~~~gveaVid~D~~AallA~~l~Ad~LiilTdVdGVy~~~-~~pda~~i~~Is~~e~~~l~~~ 261 (308)
T cd04235 183 IVIAAGGGGIPVVREGGGLKGVEAVIDKDLASALLAEEINADLLVILTDVDNVYINF-GKPNQKALEQVTVEELEKYIEE 261 (308)
T ss_pred EEEEECCCccCEEEcCCceeeeeeccCccHHHHHHHHHcCCCEEEEEecCCeEECCC-CCCCCeEcCCcCHHHHHHHHhc
Confidence 5899988 555432 11 13799999999999999999999999999999964 5789999999999888764432
Q ss_pred CCCCccccCChHHHHHHHHHHHHCC-CcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~~~g-i~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
+.+++|||.+|+++|..+++.| .+++|++ ++++.+++.|+ .||++
T Consensus 262 ---g~~~tGGM~pKv~aA~~~a~~gg~~v~I~~---~~~i~~aL~G~-~GT~I 307 (308)
T cd04235 262 ---GQFAPGSMGPKVEAAIRFVESGGKKAIITS---LENAEAALEGK-AGTVI 307 (308)
T ss_pred ---CccccCCcHHHHHHHHHHHHhCCCeEEECC---HHHHHHHHCCC-CCeEE
Confidence 4588999999999999888864 6788977 77888889888 69986
No 161
>TIGR00746 arcC carbamate kinase. The seed alignment for this model includes experimentally confirmed examples from a set of phylogenetically distinct species. In a neighbor-joining tree constructed from an alignment of candidate carbamate kinases and several acetylglutamate kinases, the latter group forms a clear outgroup which roots the tree of carbamate kinase-like proteins. This analysis suggests that in E. coli, the ArcC paralog YqeA may be a second isozyme, while the paralog YahI branches as an outlier and is less likely to be an authentic carbamate kinase. The homolog from Mycoplasma pneumoniae likewise branches outside the set containing known carbamate kinases and also scores below the trusted cutoff.
Probab=99.70 E-value=3.1e-17 Score=167.32 Aligned_cols=116 Identities=28% Similarity=0.389 Sum_probs=95.5
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
+||++++..... ...++|||++|+++|.+++||+||+||||||||++ |++|++++|++++.+++...+ . .+.++
T Consensus 193 iPvi~e~~~~~g--~e~~id~D~lAa~lA~~l~AD~LIiLTDVdGVy~~-~~~p~a~~i~~it~~e~~~~~-~--~g~~~ 266 (310)
T TIGR00746 193 VPVVLEGAELKG--VEAVIDKDLASEKLAEEVNADILVILTDVDAVYIN-YGKPDEKALREVTVEELEDYY-K--AGHFA 266 (310)
T ss_pred cCEEecCCeEEe--eEecCCHHHHHHHHHHHhCCCEEEEEeCCCceeCC-CCCCCCcCCcCcCHHHHHHHH-h--cCCcC
Confidence 577766543321 12479999999999999999999999999999997 567899999999988887533 2 24588
Q ss_pred cCChHHHHHHHHHHHHC-CCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 81 RGGMTAKVNAAYCAACA-GIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~-gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
+|||.+|++||..+++. +++++|++ ++.+.+++.|+ .||++.
T Consensus 267 tGgM~~Kl~AA~~~~~~g~~~v~I~~---~~~i~~~l~G~-~GT~I~ 309 (310)
T TIGR00746 267 AGSMGPKVEAAIEFVESGGKRAIITS---LENAVEALEGK-AGTRVT 309 (310)
T ss_pred CCCcHHHHHHHHHHHHhCCCeEEEec---hHHHHHHHCCC-CCcEEe
Confidence 99999999999887775 57899997 78999999999 899875
No 162
>PRK00942 acetylglutamate kinase; Provisional
Probab=99.70 E-value=4.3e-17 Score=166.17 Aligned_cols=117 Identities=29% Similarity=0.396 Sum_probs=102.3
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||+++ ++.+.+.+..++|+|++|+.+|.+++||.|+++|||||||++ ++++|++|+.+|+.+... ..++
T Consensus 164 vpVv~~-~~~~~~g~~~~l~~D~~A~~lA~~l~A~~li~~tdv~Gv~~~-----~~~~i~~i~~~e~~~~~~----~~~~ 233 (283)
T PRK00942 164 IPVISP-IGVGEDGETYNINADTAAGAIAAALGAEKLILLTDVPGVLDD-----KGQLISELTASEAEELIE----DGVI 233 (283)
T ss_pred EEEEcC-cEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEECCcccccC-----CCcccccCCHHHHHHHHH----cCCC
Confidence 699997 677764334579999999999999999999999999999987 489999999888875332 3478
Q ss_pred cCChHHHHHHHHHHHHCCCc-EEEEeCCCCch-hhhhhcCCceeeEEec
Q 008588 81 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDS-IIKVLEGKRVGTLFHR 127 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~-i~~~~~G~~~GT~~~~ 127 (560)
||||.+|+++|..+.+.|++ ++|+||+.|++ +.++++++..||++.+
T Consensus 234 tggm~~Kl~~a~~~~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 282 (283)
T PRK00942 234 TGGMIPKVEAALDAARGGVRSVHIIDGRVPHALLLELFTDEGIGTMIVP 282 (283)
T ss_pred CCchHHHHHHHHHHHHhCCCEEEEeCCCCCchHHHHHhcCCCcceEEec
Confidence 99999999999999999985 99999999999 8889999999999875
No 163
>cd04238 AAK_NAGK-like AAK_NAGK-like: N-Acetyl-L-glutamate kinase (NAGK)-like . Included in this CD are the Escherichia coli and Pseudomonas aeruginosa type NAGKs which catalyze the phosphorylation of N-acetyl-L-glutamate (NAG) by ATP in the second step of arginine biosynthesis found in bacteria and photosynthetic organisms using either the acetylated, noncyclic (NC), or non-acetylated, cyclic (C) route of ornithine biosynthesis. Also included in this CD is a distinct group of uncharacterized (UC) bacterial and archeal NAGKs. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.69 E-value=4.1e-17 Score=164.00 Aligned_cols=115 Identities=31% Similarity=0.360 Sum_probs=98.3
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||+++ +..+...+..++|+|++|+++|.+++||.|+++|||||||++ ++++|++++.+++.+.+ . +.++
T Consensus 140 ipVv~~-~~~~~~g~~~~~~~D~~A~~lA~~l~a~~li~ltdv~Gv~~~-----~~~~i~~i~~~e~~~~~-~---~~~~ 209 (256)
T cd04238 140 IPVIAP-IAVDEDGETYNVNADTAAGAIAAALKAEKLILLTDVPGVLDD-----PGSLISELTPKEAEELI-E---DGVI 209 (256)
T ss_pred EEEECC-cEECCCCcEEEECHHHHHHHHHHHcCCCEEEEEeCCccccCC-----CCCccccCCHHHHHHHH-H---cCCC
Confidence 699997 677764335689999999999999999999999999999987 38999999998877533 2 3478
Q ss_pred cCChHHHHHHHHHHHHCCCc-EEEEeCCCCchhhhhhcC-CceeeEE
Q 008588 81 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEG-KRVGTLF 125 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~i~~~~~G-~~~GT~~ 125 (560)
+|||.+|+++|..+++.|++ ++|+||+.|++|.+.+.+ +..||++
T Consensus 210 ~ggm~~Kl~~a~~~~~~g~~~v~I~~g~~~~~l~~~l~~~~~~GT~i 256 (256)
T cd04238 210 SGGMIPKVEAALEALEGGVRKVHIIDGRVPHSLLLELFTDEGIGTMI 256 (256)
T ss_pred CCChHHHHHHHHHHHHhCCCEEEEeCCCCCcHHHHHHhcCCCCCCCC
Confidence 99999999999999998874 999999999999988876 5678864
No 164
>cd04254 AAK_UMPK-PyrH-Ec UMP kinase (UMPK)-Ec, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis; regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinase of E. coli (Ec) is known to function as a homohexamer, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial and chloroplast UMPKs (this CD) have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Members of this CD be
Probab=99.68 E-value=1.3e-16 Score=157.78 Aligned_cols=109 Identities=23% Similarity=0.377 Sum_probs=93.5
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||++|. .|..+.|||++|+++|.+++||.|+++|||||||++|| ++|++++|++|+..++.. .+
T Consensus 122 ipV~~g~------~G~~~~~~D~~a~~lA~~l~a~~l~~~tdVdGvy~~dp~~~~~a~~i~~i~~~~~~~---~~----- 187 (231)
T cd04254 122 VVIFAGG------TGNPFFTTDTAAALRAIEINADVILKATKVDGVYDADPKKNPNAKRYDHLTYDEVLS---KG----- 187 (231)
T ss_pred EEEEECC------cCCCCCCcHHHHHHHHHHcCCCEEEEEeCCCEEEecCCCCCCCcEEeeEecHHHHHh---cc-----
Confidence 5788864 24457799999999999999999999999999999999 589999999999877653 11
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
. ...|+++++.+.++|++++|+||++|+++.+++.|+..||++.
T Consensus 188 -~--~~~d~~a~~~a~~~gi~~~I~~g~~~~~l~~~l~g~~~GT~i~ 231 (231)
T cd04254 188 -L--KVMDATAFTLCRDNNLPIVVFNINEPGNLLKAVKGEGVGTLIS 231 (231)
T ss_pred -h--hhhHHHHHHHHHHCCCeEEEEeCCCccHHHHHHCCCCCCEEeC
Confidence 1 1347889999999999999999999999999999998999873
No 165
>PRK14557 pyrH uridylate kinase; Provisional
Probab=99.67 E-value=2e-16 Score=157.15 Aligned_cols=113 Identities=19% Similarity=0.204 Sum_probs=93.1
Q ss_pred CCccccC-CCCCceechhHHHHHHHHHcCCCeEEEe-ecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCccccC
Q 008588 6 DNRNNFQ-DSSGIFWDNDSLAGLLALELKADLLVLL-SDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG 82 (560)
Q Consensus 6 gd~~~~~-~~~~~~~~~D~~aa~~A~~l~Ad~li~l-tdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tg 82 (560)
|.++... ..|..++++|++|+++|.+++||+|+++ ||||||||+|| ++|+|++|++|++.|... .+ ..
T Consensus 125 g~VvV~~G~~g~~~~stD~lAallA~~l~Ad~li~~ttdVdGvY~~DP~~~~~Ak~i~~i~~~e~~~---~~------~~ 195 (247)
T PRK14557 125 GYIVIFGGGNGQPFVTTDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVR---QN------IQ 195 (247)
T ss_pred CCEEEEECCcCCCccChHHHHHHHHHHhCCCEEEEecCCcCEeECCCCCCCCCCEEeeEEChhhhcc---cC------HH
Confidence 4444432 2356788999999999999999999999 59999999999 699999999999876531 00 11
Q ss_pred ChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecCC
Q 008588 83 GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRDA 129 (560)
Q Consensus 83 gM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~~ 129 (560)
-| ...|++.+.++|++++|+||++|++|.++++|+..||++.+.+
T Consensus 196 ~~--~~~A~~~a~~~gi~v~I~ng~~~~~l~~~l~g~~~GT~i~~~~ 240 (247)
T PRK14557 196 VM--DQAALLLARDYNLPAHVFNFDEPGVMRRICLGEHVGTLINDDA 240 (247)
T ss_pred HH--HHHHHHHHHHCCCcEEEEeCCCChHHHHHHcCCCCcEEEecCc
Confidence 13 3468899999999999999999999999999999999998873
No 166
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=99.67 E-value=1.8e-16 Score=160.65 Aligned_cols=118 Identities=26% Similarity=0.340 Sum_probs=97.3
Q ss_pred CCcccCCc---cccCCCC----CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDNR---NNFQDSS----GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd~---~~~~~~~----~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||++|+. +++++.. ..++|+|.+|+++|.+|+||.|||||||||||++ |++|++++|++++.+++..++..
T Consensus 187 IvI~~GgGGiPV~~~~g~~~gveaViD~D~aAa~LA~~L~AD~LIiLTdVdGVy~~-~~~p~~~~i~~It~~e~~~~i~~ 265 (313)
T PRK12454 187 IVIASGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFIILTDVEKVYLN-YGKPDQKPLDKVTVEEAKKYYEE 265 (313)
T ss_pred EEEEeCCCccceEcCCCcEEeeeeecCccHHHHHHHHHcCCCEEEEEeCCceeeCC-CCCCCCeEccccCHHHHHHHHhc
Confidence 68899885 4544311 1268999999999999999999999999999986 56789999999999888765542
Q ss_pred CCCCccccCChHHHHHHHHHHHHCC-CcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAACAG-IPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~~~g-i~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
..+.+|||.+|+++|..+++.| .+++|++ ++.+.+++.|+ .||++.
T Consensus 266 ---g~~~~GgM~pKv~AA~~~v~~gg~~a~I~~---~~~i~~aL~G~-~GT~I~ 312 (313)
T PRK12454 266 ---GHFKAGSMGPKILAAIRFVENGGKRAIIAS---LEKAVEALEGK-TGTRII 312 (313)
T ss_pred ---CCcCCCChHHHHHHHHHHHHcCCCeEEECc---hHHHHHHHCCC-CCeEeC
Confidence 3578999999999999888875 5699985 77888889888 799875
No 167
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism]
Probab=99.67 E-value=1.5e-16 Score=152.40 Aligned_cols=110 Identities=25% Similarity=0.347 Sum_probs=95.8
Q ss_pred CCccccCC-CCCceechhHHHHHHHHHcCCCeEEEeec-CCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCccccC
Q 008588 6 DNRNNFQD-SSGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRG 82 (560)
Q Consensus 6 gd~~~~~~-~~~~~~~~D~~aa~~A~~l~Ad~li~ltd-VdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tg 82 (560)
|.++.... .+..|.++|+.|+++|+.++||.|+++|+ |||||++|| +||||++++++++.|+.+ +. .
T Consensus 125 grVvIf~gGtg~P~fTTDt~AALrA~ei~ad~ll~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~-~~--------l- 194 (238)
T COG0528 125 GRVVIFGGGTGNPGFTTDTAAALRAEEIEADVLLKATNKVDGVYDADPKKDPDAKKYDTLTYDEVLK-IG--------L- 194 (238)
T ss_pred CCEEEEeCCCCCCCCchHHHHHHHHHHhCCcEEEEeccCCCceeCCCCCCCCCceecccCCHHHHHH-hc--------C-
Confidence 66666641 35679999999999999999999999996 999999999 799999999999999875 21 0
Q ss_pred ChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 83 GMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 83 gM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
-..+..|+.++.++++|++++|+++++++..++.|+..||++.
T Consensus 195 -~vmD~tA~~l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~gT~V~ 237 (238)
T COG0528 195 -KVMDPTAFSLARDNGIPIIVFNINKPGNLKRALKGEEVGTIVE 237 (238)
T ss_pred -eeecHHHHHHHHHcCCcEEEEeCCCCccHHHHHcCCCCceEec
Confidence 1346789999999999999999999999999999999999874
No 168
>PRK12354 carbamate kinase; Reviewed
Probab=99.66 E-value=1.6e-16 Score=160.63 Aligned_cols=114 Identities=30% Similarity=0.396 Sum_probs=94.1
Q ss_pred CCcccCCccccCCCC-CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~-~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||+++|..- ..+ ..|+|+|++|++||.+++||.|+|||||||||++ |.+|++++|++++.+++.. + .+
T Consensus 186 IPV~~~~~~~--~~gv~aViD~D~~Aa~LA~~l~Ad~LiiLTdVdGVy~~-~~~p~~k~i~~it~~e~~~-~------~f 255 (307)
T PRK12354 186 IPVVYDADGK--LHGVEAVIDKDLAAALLAEQLDADLLLILTDVDAVYLD-WGKPTQRAIAQATPDELRE-L------GF 255 (307)
T ss_pred cCeEecCCCc--eeeeeecCCccHHHHHHHHHcCCCEEEEEeCCcceecC-CCCCCCeECCCCCHHHHHh-h------CC
Confidence 5999987531 113 2489999999999999999999999999999997 4468999999999888875 3 36
Q ss_pred ccCChHHHHHHHHHHHHCCC-cEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 80 GRGGMTAKVNAAYCAACAGI-PVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi-~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
++|||.+|++||..+++.+. +++|.+ ++.+.+++.|+ .||++.++
T Consensus 256 ~~GgM~pKV~AA~~~~~~gg~~viI~~---~~~l~~al~G~-~GT~I~~~ 301 (307)
T PRK12354 256 AAGSMGPKVEAACEFVRATGKIAGIGS---LEDIQAILAGE-AGTRISPE 301 (307)
T ss_pred CcCChHHHHHHHHHHHHhCCCEEEECC---HHHHHHHHCCC-CceEEecC
Confidence 89999999999998887644 688854 67788888887 79999875
No 169
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.66 E-value=1.7e-16 Score=159.13 Aligned_cols=114 Identities=31% Similarity=0.296 Sum_probs=96.6
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||+++. ..+.+.+..++|+|++|+++|.+++|| ++++|||||||++| +++|++++.+++++.+. +.++
T Consensus 138 ipVi~~~-g~~~~g~~~~~~~D~~A~~lA~~l~A~-~i~ltdv~Gv~~~~-----~~~i~~i~~~e~~~~~~----~g~~ 206 (252)
T cd04249 138 LPIISSI-GADDQGQLMNVNADQAATAIAQLLNAD-LVLLSDVSGVLDAD-----KQLISELNAKQAAELIE----QGVI 206 (252)
T ss_pred EEEECCC-EECCCCCEeeecHHHHHHHHHHHcCCC-EEEEeCCcccCCCC-----CcCccccCHHHHHHHHh----cCCC
Confidence 6999985 566543456799999999999999999 68999999999874 47999999888775332 3479
Q ss_pred cCChHHHHHHHHHHHHC-CCcEEEEeCCCCchhhhhhcCCceeeEE
Q 008588 81 RGGMTAKVNAAYCAACA-GIPVVITSGFAMDSIIKVLEGKRVGTLF 125 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~-gi~v~I~~g~~~~~i~~~~~G~~~GT~~ 125 (560)
+|||.+|+.+|..+++. +++++|+||+.|+.+.++++|+..||++
T Consensus 207 ~gGm~~kl~~a~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~I 252 (252)
T cd04249 207 TDGMIVKVNAALDAAQSLRRGIDIASWQYPEQLTALLAGEPVGTKI 252 (252)
T ss_pred cCCcHHHHHHHHHHHHhCCCeEEEEeCCCccHHHHHHcCCCCCcCC
Confidence 99999999999998876 4689999999999999999999889864
No 170
>TIGR02075 pyrH_bact uridylate kinase. This protein, also called UMP kinase, converts UMP to UDP by adding a phosphate from ATP. It is the first step in pyrimidine biosynthesis. GTP is an allosteric activator. In a large fraction of all bacterial genomes, the gene tends to be located immediately downstream of elongation factor Ts and upstream of ribosome recycling factor. A related protein family, believed to be equivalent in function and found in the archaea and in spirochetes, is described by a separate model, TIGR02076.
Probab=99.65 E-value=3.6e-16 Score=154.84 Aligned_cols=102 Identities=25% Similarity=0.359 Sum_probs=89.4
Q ss_pred CCCceechhHHHHHHHHHcCCCeEEEeec-CCccccCCC-CCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHH
Q 008588 14 SSGIFWDNDSLAGLLALELKADLLVLLSD-VEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAA 91 (560)
Q Consensus 14 ~~~~~~~~D~~aa~~A~~l~Ad~li~ltd-VdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa 91 (560)
.|..++|||++|+++|..++||.|+++|| |||||++|| ++|++++|++|++.++.. . + . ...+++++
T Consensus 130 ~g~~~~s~D~~a~~lA~~l~a~~li~~td~VdGvy~~dp~~~~~a~~i~~i~~~e~~~-~--~------~--~~~d~~~~ 198 (233)
T TIGR02075 130 TGNPFFTTDTAAALRAIEINADVILKGTNGVDGVYTADPKKNKDAKKYETITYNEALK-K--N------L--KVMDLTAF 198 (233)
T ss_pred CCCCCCCchHHHHHHHHHcCCCEEEEeecccCeEEcCCCCCCCCCeECcEecHHHHHh-c--C------H--HHHHHHHH
Confidence 35678999999999999999999999999 999999999 589999999999877653 1 1 1 13578899
Q ss_pred HHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 92 YCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 92 ~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
+.+.++|++++|+||++|+++.++++|+..||++.
T Consensus 199 ~~a~~~~i~v~i~~g~~~~~l~~~l~g~~~GT~i~ 233 (233)
T TIGR02075 199 ALARDNNLPIVVFNIDEPGALKKVILGKGIGTLVS 233 (233)
T ss_pred HHHHHCCCeEEEEeCCCcchHHHHHCCCCCCEEeC
Confidence 99999999999999999999999999998999873
No 171
>cd04246 AAK_AK-DapG-like AAK_AK-DapG-like: Amino Acid Kinase Superfamily (AAK), AK-DapG-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional enzymes found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species, as well as, the catalytic AK domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related isoenzymes. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. The role of the AKI isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulati
Probab=99.64 E-value=3e-16 Score=156.10 Aligned_cols=102 Identities=21% Similarity=0.230 Sum_probs=88.4
Q ss_pred CCcccCCccccCCCCCc---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCC
Q 008588 1 MPVSFDNRNNFQDSSGI---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~ 76 (560)
|||++|+...+.+.... ++|+|++|+.+|.+++||.|+++|||||||++|| ++|++++|++++++++.+ +..
T Consensus 128 ipVi~g~~~~~~~g~~~~l~~g~~D~~A~~lA~~l~A~~li~~tdV~GVy~~dP~~~~~a~~i~~l~~~e~~~-l~~--- 203 (239)
T cd04246 128 VVVVAGFQGVNEDGEITTLGRGGSDTTAVALAAALKADRCEIYTDVDGVYTADPRIVPKARKLDVISYDEMLE-MAS--- 203 (239)
T ss_pred EEEEcCccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcccCCHHHHHH-HHh---
Confidence 69999998877642232 3599999999999999999999999999999999 579999999999988875 331
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|.+..|..|+..+.++|+|++|.|+++|+
T Consensus 204 ----~G~~~~~~~a~~~a~~~gi~i~i~~~~~~~ 233 (239)
T cd04246 204 ----LGAKVLHPRSVELAKKYNVPLRVRSSFSEN 233 (239)
T ss_pred ----CCCcccCHHHHHHHHHCCCeEEEecCCCCC
Confidence 256788999999999999999999998875
No 172
>cd04261 AAK_AKii-LysC-BS AAK_AKii-LysC-BS: Amino Acid Kinase Superfamily (AAK), AKii; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine, and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase isoenzyme type, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In this organism and other various Gram-positive bacteria, the DAP-lysine pathway is feedback regulated by the concerted action of lysine and
Probab=99.64 E-value=3.8e-16 Score=155.33 Aligned_cols=102 Identities=20% Similarity=0.229 Sum_probs=88.5
Q ss_pred CCcccCCccccCCCCCc---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCC
Q 008588 1 MPVSFDNRNNFQDSSGI---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~ 76 (560)
|||++|+...+++.... ++|+|++|+.+|.+++||.|+++|||||||++|| .+|++++|++++++|+.+ +..
T Consensus 128 ipVi~G~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~lii~tdV~GVy~~dP~~~~~a~~i~~i~~~ea~~-l~~--- 203 (239)
T cd04261 128 VVIVAGFQGINEDGDITTLGRGGSDTSAVALAAALGADRCEIYTDVDGVYTADPRIVPKARKLDEISYDEMLE-MAS--- 203 (239)
T ss_pred eEEEcCccccCCCCCEEecCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCCCCCCCCCCceEccccCHHHHHH-HHh---
Confidence 69999998888643333 3599999999999999999999999999999999 589999999999988875 321
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|.+..|+.|+..+.++|+|++|.|+++|+
T Consensus 204 ----~G~~~~~~~a~~~~~~~~i~i~I~n~~~~~ 233 (239)
T cd04261 204 ----LGAKVLHPRSVELAKKYGVPLRVLSSFSEE 233 (239)
T ss_pred ----ccccccCHHHHHHHHHcCCeEEEecCCCCC
Confidence 255788999999999999999999999885
No 173
>PF00696 AA_kinase: Amino acid kinase family Match to Glutamate-5-kinases, C-terminal end of the alignment Match to Aspartate kinases; InterPro: IPR001048 This entry contains proteins with various specificities and includes the aspartate, glutamate and uridylate kinase families. In prokaryotes and plants the synthesis of the essential amino acids lysine and threonine is predominantly regulated by feed-back inhibition of aspartate kinase (AK) and dihydrodipicolinate synthase (DHPS). In Escherichia coli, thrA, metLM, and lysC encode aspartokinase isozymes that show feedback inhibition by threonine, methionine, and lysine, respectively []. The lysine-sensitive isoenzyme of aspartate kinase from spinach leaves has a subunit composition of 4 large and 4 small subunits []. In plants although the control of carbon fixation and nitrogen assimilation has been studied in detail, relatively little is known about the regulation of carbon and nitrogen flow into amino acids. The metabolic regulation of expression of an Arabidopsis thaliana aspartate kinase/homoserine dehydrogenase (AK/HSD) gene, which encodes two linked key enzymes in the biosynthetic pathway of aspartate family amino acids has been studied []. The conversion of aspartate into either the storage amino acid asparagine or aspartate family amino acids may be subject to a coordinated, reciprocal metabolic control, and this biochemical branch point is a part of a larger, coordinated regulatory mechanism of nitrogen and carbon storage and utilization.; GO: 0008652 cellular amino acid biosynthetic process; PDB: 2X2W_B 2WXB_B 1B7B_C 2J4L_F 2J4K_E 2J4J_F 2OGX_B 3QUO_A 3D40_A 3D41_A ....
Probab=99.63 E-value=5.4e-16 Score=154.39 Aligned_cols=101 Identities=36% Similarity=0.424 Sum_probs=89.2
Q ss_pred CCcccCCccccCCCCC----ceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG----IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~----~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|+.+.+.+ |. ..+++|++|+.+|.+|+|+.|+++|||||||+.|| .+|++++|++|+++|+.+...
T Consensus 136 ipVv~g~~~~~~~-g~~~~~~~~~sD~~A~~lA~~l~A~~li~~tdV~Gv~~~dP~~~~~~~~i~~l~~~e~~~l~~--- 211 (242)
T PF00696_consen 136 IPVVSGFAGIDDD-GEVTTLGNVSSDYIAALLAAALGADKLIFLTDVDGVYTADPRIVPDARLIPELSYDEAEELAS--- 211 (242)
T ss_dssp EEEEESEEEEETT-STEEEEEEETHHHHHHHHHHHTTCSEEEEEESSSSEBSSSTTTSTTSEBESEEEHHHHHHHHH---
T ss_pred EEEEeCCcccCCC-CCcccCCCCCHHHHHHHHHHHhCchhhhhhhhcCceeecCCCCCCCCeeeeEeeHHHHHHHHh---
Confidence 6999999988764 54 46999999999999999999999999999999999 479999999999999986332
Q ss_pred CCccccCChHHHHHHHHHHHHC-CCcEEEEe
Q 008588 76 KSRVGRGGMTAKVNAAYCAACA-GIPVVITS 105 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~-gi~v~I~~ 105 (560)
.+.+++|||..|+.+|..+++. +++++|+|
T Consensus 212 ~~~~~~~gm~~k~~~a~~~~~~~~~~v~I~n 242 (242)
T PF00696_consen 212 KSGDVTGGMKPKHPAALEAAEEGGIPVHIIN 242 (242)
T ss_dssp HTTSSTTTHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred cCCCCCCCHHHHHHHHHHHHHcCCCcEEEeC
Confidence 3568999999999999988886 77999986
No 174
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=99.63 E-value=5.4e-16 Score=153.03 Aligned_cols=102 Identities=25% Similarity=0.343 Sum_probs=87.3
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|++..+.+ +.. ++++|++|+++|.+++||.|+++|||||||++|| ++|++++|++++++|+.+ +..
T Consensus 115 vpVv~g~i~~~~~-g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tdV~Gvy~~dP~~~~~a~~i~~i~~~e~~~-l~~-- 190 (227)
T cd04234 115 VPVVTGFIGRNED-GEITTLGRGGSDYSAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALE-LAY-- 190 (227)
T ss_pred EEEecCceecCCC-CCEEEeeCCCcHHHHHHHHHHhCCCEEEEEECCCccCCCCCCCCCCceEcCcCCHHHHHH-HHh--
Confidence 6999999998864 432 3589999999999999999999999999999999 589999999999998875 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCch
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDS 111 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~ 111 (560)
.++++| |..|++.+.++|+|++|.|+++|+.
T Consensus 191 ---~G~~~~--~~~a~~~a~~~~i~i~i~~~~~~~~ 221 (227)
T cd04234 191 ---FGAKVL--HPRAVEPARKANIPIRVKNTFNPEA 221 (227)
T ss_pred ---CCcccc--CHHHHHHHHHcCCeEEEEeCCCCCC
Confidence 235555 6799999999999999999998863
No 175
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.63 E-value=5.2e-16 Score=155.87 Aligned_cols=109 Identities=33% Similarity=0.425 Sum_probs=94.0
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||+. +++.+.+.+..++|+|++|+.+|.+|+||.|+|+|||||||++ +++|++++.+++.+.+ .++
T Consensus 147 vpVi~-~~~~~~~G~~~~i~~D~~A~~lA~~L~A~~li~~tdv~Gv~~~------~~~i~~i~~~e~~~l~------~~~ 213 (257)
T cd04251 147 LPVVS-PVAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYLD------GRVIERITVSDAESLL------EKA 213 (257)
T ss_pred eEEEe-CcEECCCCcEEecCHHHHHHHHHHHcCCCEEEEEeCChhheeC------CcccCccCHHHHHHHH------hhC
Confidence 69995 5777754334569999999999999999999999999999974 7899999998877533 258
Q ss_pred cCChHHHHHHHHHHHHCCCc-EEEEeCCCCchhhhhhcCCceeeE
Q 008588 81 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTL 124 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~i~~~~~G~~~GT~ 124 (560)
+|||.+|+++|..+++.|++ ++|++|+.|+++.+++.|+ ||.
T Consensus 214 ~ggm~~Kl~aa~~a~~~gv~~v~i~~g~~~~~l~~~l~g~--gT~ 256 (257)
T cd04251 214 GGGMKRKLLAAAEAVEGGVREVVIGDARADSPISSALNGG--GTV 256 (257)
T ss_pred CCchHHHHHHHHHHHHcCCCEEEEecCCCccHHHHHHcCC--CcC
Confidence 99999999999999999985 9999999999999988874 775
No 176
>COG0548 ArgB Acetylglutamate kinase [Amino acid transport and metabolism]
Probab=99.61 E-value=2.2e-15 Score=148.81 Aligned_cols=117 Identities=31% Similarity=0.411 Sum_probs=100.4
Q ss_pred CCcccCCccccCCCCCce-echhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~-~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||+.- +..+. +|..| +|.|++|..+|.+|+|+.||++|||+|||+++| +| ++|++++.+++++.+. ...
T Consensus 145 IpViap-ia~~~-~G~~~NvnaD~~A~~iA~aLkAekLi~ltdv~Gvl~~~~-~~--s~i~~~~~~~~~~li~----~~~ 215 (265)
T COG0548 145 IPVIAP-IAVDE-DGETLNVNADTAAGALAAALKAEKLILLTDVPGVLDDKG-DP--SLISELDAEEAEELIE----QGI 215 (265)
T ss_pred ceEEec-ceECC-CCcEEeeCHHHHHHHHHHHcCCCeEEEEeCCcccccCCC-Cc--eeeccCCHHHHHHHHh----cCC
Confidence 677777 45664 46665 999999999999999999999999999999854 33 7999999999987554 337
Q ss_pred ccCChHHHHHHHHHHHHCCCc-EEEEeCCCCchh-hhhhcCCceeeEEe
Q 008588 80 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFH 126 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~i-~~~~~G~~~GT~~~ 126 (560)
.+|||.+|+++|..|++.|++ ++|+||+.++.+ .+++++..+||.+.
T Consensus 216 i~~GMi~Kv~~a~~A~~~Gv~~v~ii~g~~~~~ll~eLFt~~giGT~i~ 264 (265)
T COG0548 216 ITGGMIPKVEAALEALESGVRRVHIISGRVPHSLLLELFTRDGIGTMIV 264 (265)
T ss_pred ccCccHHHHHHHHHHHHhCCCeEEEecCCCcchHHHHHhcCCCcceEec
Confidence 899999999999999999996 999999999995 66889998999864
No 177
>PRK12352 putative carbamate kinase; Reviewed
Probab=99.59 E-value=4.3e-15 Score=151.93 Aligned_cols=117 Identities=25% Similarity=0.261 Sum_probs=94.8
Q ss_pred CCcccCCccccCCCCC-ceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||.+.... +. .+. ..+|+|.+|+.+|.+|+||.|||||||||||++++ +|++++|++++..++.+.+.. ...
T Consensus 197 iPv~~~~~g-~~-~n~~~nInaD~aAa~iA~aL~AdkLI~LTDV~GV~~d~~-~~~~~li~~lt~~e~~~li~~---g~i 270 (316)
T PRK12352 197 IPVVRTDAG-DY-QSVDAVIDKDLSTALLAREIHADILVITTGVEKVCIHFG-KPQQQALDRVDIATMTRYMQE---GHF 270 (316)
T ss_pred CCEEeCCCC-Cc-cCceeeecHHHHHHHHHHHhCCCEEEEEeCchhhccCCC-CCCcccccccCHHHHHHHHhc---CCc
Confidence 488775321 11 233 45999999999999999999999999999998764 578899999999998865532 224
Q ss_pred ccCChHHHHHHHHHHHHCCCc-EEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 80 GRGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
..|||.+|+++|..+++.|+. ++|++ ++.+.++++|+ .||++..
T Consensus 271 ~~GgM~pKl~aA~~al~~Gv~~v~I~~---~~~i~~al~g~-~GT~I~~ 315 (316)
T PRK12352 271 PPGSMLPKIIASLTFLEQGGKEVIITT---PECLPAALRGE-TGTHIIK 315 (316)
T ss_pred CCCCCHHHHHHHHHHHHhCCCeEEEcc---hHHHHHHHcCC-CCeEEEe
Confidence 479999999999999998875 99997 88899999998 8898864
No 178
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.59 E-value=5.2e-15 Score=160.16 Aligned_cols=121 Identities=17% Similarity=0.202 Sum_probs=100.1
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||+ +++..|.+.+..++|+|++|+.||.+|+||.|+|+|||||||++ ++++|++++.+++.+.+. .....+.
T Consensus 170 ipV~-~~i~~~~~g~~~ni~~D~~a~~lA~~l~a~~lv~ltdv~GV~~~-----~~~~i~~i~~~~~~~~~~-~~~~~~~ 242 (441)
T PRK05279 170 IVLL-SPLGYSPTGESFNLTMEEVATQVAIALKADKLIFFTESQGVLDE-----DGELIRELSPNEAQALLE-ALEDGDY 242 (441)
T ss_pred eEEE-CCceECCCCCEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCchhhhCCHHHHHHHHh-hhhcCCC
Confidence 4666 78888865334569999999999999999999999999999964 588999999888875442 1113467
Q ss_pred cCChHHHHHHHHHHHHCCCc-EEEEeCCCCchhhhh-hcCCceeeEEecC
Q 008588 81 RGGMTAKVNAAYCAACAGIP-VVITSGFAMDSIIKV-LEGKRVGTLFHRD 128 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi~-v~I~~g~~~~~i~~~-~~G~~~GT~~~~~ 128 (560)
+|||.+|+++|..+++.|++ ++|++|+.|+.+... ++.+..||.+..+
T Consensus 243 ~ggM~~Kv~~a~~~~~~gv~~v~i~~~~~~~~l~~~l~~~~g~GT~i~~~ 292 (441)
T PRK05279 243 NSGTARFLRAAVKACRGGVRRSHLISYAEDGALLQELFTRDGIGTMIVME 292 (441)
T ss_pred CccHHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCceEEecC
Confidence 99999999999999999995 999999999998764 5555689999876
No 179
>cd04260 AAK_AKi-DapG-BS AAK_AKi-DapG-BS: Amino Acid Kinase Superfamily (AAK), AKi-DapG; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the diaminopimelate-sensitive aspartokinase isoenzyme AKI (DapG), a monofunctional class enzyme found in Bacilli (Bacillus subtilis 168), Clostridia, and Actinobacteria bacterial species. In Bacillus subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive aspartokinase isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The B. subtilis AKI is tetrameric consisting of two alpha and two bet
Probab=99.58 E-value=3.5e-15 Score=148.84 Aligned_cols=102 Identities=21% Similarity=0.245 Sum_probs=85.1
Q ss_pred CCcccCCccccCCCCCce---echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCC
Q 008588 1 MPVSFDNRNNFQDSSGIF---WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~---~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~ 76 (560)
|||++|+++.|.+..... +++|++|+.+|.+|+||.|+++|||||||++|| .+|++++|++|+++|+.+.+..+
T Consensus 133 VPVv~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~GVy~~dP~~~~~a~~i~~i~~~e~~~l~~~g-- 210 (244)
T cd04260 133 VVVVAGFQGVTEDGEVTTLGRGGSDTTAAALGAALNAEYVEIYTDVDGIMTADPRVVPNARILDVVSYNEVFQMAHQG-- 210 (244)
T ss_pred EEEecCCcccCCCCCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCcCCcCCCCCCCCCeEcccCCHHHHHHHHHcC--
Confidence 699999988886422233 489999999999999999999999999999999 47999999999998887633211
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
-=..|..|+..+.++++|++|.|+++|+
T Consensus 211 ------~~v~~~~a~~~~~~~~i~v~I~~~~~~~ 238 (244)
T cd04260 211 ------AKVIHPRAVEIAMQANIPIRIRSTMSEN 238 (244)
T ss_pred ------chhcCHHHHHHHHHcCCeEEEecCCCCC
Confidence 1146788999999999999999998764
No 180
>PRK09411 carbamate kinase; Reviewed
Probab=99.58 E-value=4.2e-15 Score=149.09 Aligned_cols=109 Identities=29% Similarity=0.383 Sum_probs=89.3
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||.+++- ....++|+|++|+.+|.+|+||.|||||||||||++ +.+|++++|++++.+++...+ ..
T Consensus 187 IPV~~~~~-----G~e~vIDkD~~Aa~LA~~L~Ad~LIiLTDVdGV~~n-~~~p~~~~I~~it~~e~~~~~-------~~ 253 (297)
T PRK09411 187 VPVTEDGA-----GSEAVIDKDLAAALLAEQINADGLVILTDADAVYEN-WGTPQQRAIRHATPDELAPFA-------KA 253 (297)
T ss_pred CCeEEcCC-----CeEEecCHHHHHHHHHHHhCCCEEEEEeCchhhccC-CCCCCCcCCCCcCHHHHHHhc-------cC
Confidence 46665441 124589999999999999999999999999999986 458889999999988886532 25
Q ss_pred cCChHHHHHHHHHHHHC-CCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 81 RGGMTAKVNAAYCAACA-GIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~-gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
+|||.+|+++|..+++. |.+++|.+ ++.+.+++.|+ .||++.
T Consensus 254 ~GgM~pKVeAA~~~v~~~g~~a~I~~---l~~~~~~l~G~-~GT~I~ 296 (297)
T PRK09411 254 DGAMGPKVTAVSGYVRSRGKPAWIGA---LSRIEETLAGE-AGTCIS 296 (297)
T ss_pred CCCcHHHHHHHHHHHHhCCCeEEECC---hhHHHHHHCCC-CCeEEe
Confidence 89999999999888775 66788865 77888888887 699874
No 181
>TIGR00761 argB acetylglutamate kinase. This model describes N-acetylglutamate kinases (ArgB) of many prokaryotes and the N-acetylglutamate kinase domains of multifunctional proteins from yeasts. This enzyme is the second step in the "acetylated" ornithine biosynthesis pathway. A related group of enzymes representing the first step of the pathway contain a homologous domain and are excluded from this model.
Probab=99.57 E-value=4.2e-15 Score=147.14 Aligned_cols=93 Identities=33% Similarity=0.390 Sum_probs=79.0
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
|||++|. ..+.+.+..++|+|.+|+.+|.+|+||.|+|+|||||||++|| +++|++|+.+++.+.+. ..++
T Consensus 137 IPVi~~~-~~~~~g~~~~l~sD~~A~~lA~~l~A~~li~ltdv~Gv~~~d~----~~~i~~i~~~e~~~l~~----~~~~ 207 (231)
T TIGR00761 137 IPVISSL-ALTAEGQALNVNADTAAGALAAALGAEKLVLLTDVPGILNGDG----QSLISEIPLEEIEQLIE----QGII 207 (231)
T ss_pred eEEECCC-ccCCCCcEEEeCHHHHHHHHHHHcCCCEEEEEECCCCeecCCC----CeeccccCHHHHHHHHH----cCCC
Confidence 6999995 5665433567999999999999999999999999999999976 47999999988775332 2478
Q ss_pred cCChHHHHHHHHHHHHCCCcEE
Q 008588 81 RGGMTAKVNAAYCAACAGIPVV 102 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi~v~ 102 (560)
||||.+|+++|..+.+.|++.+
T Consensus 208 tggm~~Kl~~a~~a~~~gv~~v 229 (231)
T TIGR00761 208 TGGMIPKVNAALEALRGGVKSV 229 (231)
T ss_pred CCchHHHHHHHHHHHHcCCCEE
Confidence 9999999999999999999833
No 182
>cd04237 AAK_NAGS-ABP AAK_NAGS-ABP: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the arginine-biosynthesis pathway (ABP) found in gamma- and beta-proteobacteria and higher plant chloroplasts. Domain architecture of these NAGS consisted of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal NAG synthase, acetyltransferase (ArgA) domain. Both bacterial and plant sequences in this CD have a conserved N-terminal extension; a similar sequence in the NAG kinases of the cyclic arginine-biosynthesis pathway has been implicated in feedback inhibition sensing. Plant sequences also have an N-terminal chloroplast transit peptide and an insert (approx. 70 residues) in the C-terminal region of ArgB. Members of this CD belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.54 E-value=1.8e-14 Score=146.30 Aligned_cols=114 Identities=22% Similarity=0.259 Sum_probs=93.0
Q ss_pred CcccCCccccCCCCCc-eechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccc
Q 008588 2 PVSFDNRNNFQDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVG 80 (560)
Q Consensus 2 Pv~~gd~~~~~~~~~~-~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~ 80 (560)
||+. ....+.+ |.. ++|.|++|+.+|.+|+||.|+|+|||||||++ ++++|++++.+++.+.+..+ ...
T Consensus 164 pv~~-~~g~~~~-g~~lnvnaD~~A~~LA~~L~a~klv~ltdv~GV~~~-----~~~~i~~i~~~e~~~l~~~~---~~~ 233 (280)
T cd04237 164 VLLS-PLGYSPT-GEVFNLSMEDVATAVAIALKADKLIFLTDGPGLLDD-----DGELIRELTAQEAEALLETG---ALL 233 (280)
T ss_pred EEEC-CceECCC-CCEEeeCHHHHHHHHHHHcCCCEEEEEeCCCcccCC-----CCCccccCCHHHHHHHHHcC---CCC
Confidence 4444 4566654 544 58999999999999999999999999999975 47899999988887655432 124
Q ss_pred cCChHHHHHHHHHHHHCCC-cEEEEeCCCCchhh-hhhcCCceeeEE
Q 008588 81 RGGMTAKVNAAYCAACAGI-PVVITSGFAMDSII-KVLEGKRVGTLF 125 (560)
Q Consensus 81 tggM~~K~~aa~~~~~~gi-~v~I~~g~~~~~i~-~~~~G~~~GT~~ 125 (560)
+|||.+|+++|..+++.|+ +++|++++.|+.+. ++++.+..||.+
T Consensus 234 ~ggM~~Kv~~a~~a~~~Gv~~v~I~~~~~~~~ll~elft~~g~GT~i 280 (280)
T cd04237 234 TNDTARLLQAAIEACRGGVPRVHLISYAEDGALLLELFTRDGVGTLI 280 (280)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHhcCCCCCCcC
Confidence 9999999999999999999 59999999999874 477777788863
No 183
>cd04259 AAK_AK-DapDC AAK_AK-DapDC: Amino Acid Kinase Superfamily (AAK), AK-DapDC; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the bifunctional enzyme AK - DAP decarboxylase (DapDC) found in some bacteria. Aspartokinase is the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. DapDC, which is the lysA gene product, catalyzes the decarboxylation of DAP to lysine.
Probab=99.53 E-value=2.1e-14 Score=146.28 Aligned_cols=101 Identities=21% Similarity=0.225 Sum_probs=89.5
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+.+ |.+ .++||.+|+.+|..++||.++++|||||||+.|| +.|++++|++++++|+.+ +..
T Consensus 183 v~Vv~GFig~~~~-G~~ttLGrggsD~tA~~lA~~l~A~~l~i~TdV~Gvyt~DP~~~~~a~~i~~ls~~ea~~-l~~-- 258 (295)
T cd04259 183 LIITQGFIARNAH-GETVLLGRGGSDTSAAYFAAKLQAARCEIWTDVPGLFTANPHEVPHARLLKRLDYDEAQE-IAT-- 258 (295)
T ss_pred eeEeCCceeeCCC-CCEEEECCCChHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEeceeCHHHHHH-HHH--
Confidence 6899999887763 532 4899999999999999999999999999999999 589999999999999985 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|++..+..++..+.+++||++|.|+++|+
T Consensus 259 -----~Ga~v~h~~a~~~a~~~~ipi~i~~~~~p~ 288 (295)
T cd04259 259 -----MGAKVLHPRCIPPARRANIPMVVRSTERPE 288 (295)
T ss_pred -----cCCcccCHHHHHHHHHCCCCEEEEeCCCCC
Confidence 567888999999999999999999999886
No 184
>TIGR02078 AspKin_pair Pyrococcus aspartate kinase subunit, putative. This family consists of proteins restricted to and found as paralogous pairs (typically close together) in species of Pyrococcus, a hyperthermophilic archaeal genus. Members are always found close to other genes of threonine biosynthesis and appear to represent the Pyrococcal form of aspartate kinase. Alignment to aspartokinase III from E. coli shows that 300 N-terminal and 20 C-terminal amino acids are homologous, but the form in Pyrococcus lacks ~ 100 amino acids in between.
Probab=99.49 E-value=8.7e-14 Score=143.17 Aligned_cols=98 Identities=24% Similarity=0.236 Sum_probs=84.5
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|++. +. .|.. .+++|.+|+.+|..++||.++++|||||||++|| .+|+|++|++++++|+.+ +.
T Consensus 159 IpVv~Gf~~-~~-~G~~ttlGRGgSD~~Aa~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~lsy~Ea~e-la--- 232 (327)
T TIGR02078 159 IPVIPGFYG-NL-NGYRVTLGRGGSDYSAVALGVLLNSKLVAIMSDVEGIFTADPKLVPSARLIPYLSYEEIKI-AA--- 232 (327)
T ss_pred EEEEeCCcc-CC-CCeEEEcCCCChHHHHHHHHHhcCCCEEEEEECCCccCCCCCCcCCCceEccccCHHHHHH-HH---
Confidence 699999987 54 3533 2589999999999999999999999999999999 589999999999998873 32
Q ss_pred CCccccCChH-HHHHHHHHHHHCCCcEEEEeCCCC
Q 008588 76 KSRVGRGGMT-AKVNAAYCAACAGIPVVITSGFAM 109 (560)
Q Consensus 76 ~~~~~tggM~-~K~~aa~~~~~~gi~v~I~~g~~~ 109 (560)
..||. .+..|+..+.++|||++|.|.++|
T Consensus 233 -----~~Gakvlhp~a~~~a~~~~Ipi~I~~t~~~ 262 (327)
T TIGR02078 233 -----KLGMKALQWKAADLAKEYKIPVLFGRTRDW 262 (327)
T ss_pred -----HCCchhhHHHHHHHHHHCCCeEEEEeCCCc
Confidence 34775 688999999999999999998766
No 185
>cd04244 AAK_AK-LysC-like AAK_AK-LysC-like: Amino Acid Kinase Superfamily (AAK), AK-LysC-like; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive AK isoenzyme found in higher plants. The lysine-sensitive AK isoenzyme is a monofunctional protein. It is involved in the overall regulation of the aspartate pathway and can be synergistically inhibited by S-adenosylmethionine. Also included in this CD is an uncharacterized LysC-like AK found in Euryarchaeota and some bacteria. AK catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP.
Probab=99.49 E-value=7e-14 Score=143.02 Aligned_cols=101 Identities=22% Similarity=0.296 Sum_probs=88.4
Q ss_pred CCcccCCccccCCCCC-c---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG-I---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||+.|.+..+.+ |. + .+++|++|+.+|.+|+||.++++|||||||+.|| ++|++++|++++++|+.+ +..
T Consensus 186 vpVv~Gfig~~~~-g~~ttlgRggsD~~A~~~A~~l~a~~l~i~tdV~Gv~~~dP~~~~~a~~i~~lsy~Ea~e-l~~-- 261 (298)
T cd04244 186 IPVVTGFIGATED-GAITTLGRGGSDYSATIIGAALDADEIWIWKDVDGVMTADPRIVPEARTIPRLSYAEAME-LAY-- 261 (298)
T ss_pred EEEEeCccccCCC-CCEEEecCCChHHHHHHHHHHcCCCEEEEEECCCCCCCCCCCCCCCCeEcCccCHHHHHH-HHh--
Confidence 6999998777653 43 2 3699999999999999999999999999999999 589999999999999986 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|.+..+..++..+.+++||++|.|+++|+
T Consensus 262 -----~Ga~vlhp~ai~~a~~~~Ipi~i~n~~~p~ 291 (298)
T cd04244 262 -----FGAKVLHPRTVEPAMEKGIPVRVKNTFNPE 291 (298)
T ss_pred -----CCCcccCHHHHHHHHHcCCcEEEeeCCCCC
Confidence 467788899999999999999999999886
No 186
>PRK08841 aspartate kinase; Validated
Probab=99.47 E-value=1.2e-13 Score=146.55 Aligned_cols=100 Identities=19% Similarity=0.240 Sum_probs=87.1
Q ss_pred CCcccCCccccCCCCC-c---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG-I---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+++ |. + ++++|++|+.+|..++||.|+++|||||||++|| .+|+|++|++|+++|+.+ +..
T Consensus 130 vpVv~Gf~g~~~~-g~~ttlgrggsD~tAa~lA~~L~Ad~l~i~TDVdGVyt~DP~~v~~A~~i~~is~~ea~e-la~-- 205 (392)
T PRK08841 130 IVIVAGFQGRNEN-GDITTLGRGGSDTTAVALAGALNADECQIFTDVDGVYTCDPRVVKNARKLDVIDFPSMEA-MAR-- 205 (392)
T ss_pred EEEEeCCcccCCC-CCEEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCCCcCCCCCCCCceEcccccHHHHHH-HHh--
Confidence 6999999877764 43 2 3699999999999999999999999999999999 599999999999999875 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 109 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~ 109 (560)
.|.+..+..++..+.++|||++|.|++++
T Consensus 206 -----~Ga~vlhp~ai~~a~~~~Ipi~i~n~~~~ 234 (392)
T PRK08841 206 -----KGAKVLHLPSVQHAWKHSVPLRVLSSFEV 234 (392)
T ss_pred -----cCccccCHHHHHHHHHCCCeEEEEecCCC
Confidence 46678889999999999999999998865
No 187
>cd04252 AAK_NAGK-fArgBP AAK_NAGK-fArgBP: N-Acetyl-L-glutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (fArgBP). The nuclear-encoded, mitochondrial polyprotein precursor with an N-terminal NAGK (ArgB) domain (this CD), a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved in the mitochondria into two distinct enzymes (NAGK-DUF619 and NAGPR). Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. This CD also includes some gamma-proteobacteria (Xanthomonas and Xylella) NAG kinases with an N-terminal NAGK (ArgB) domain (this CD) and a C-terminal DUF619 domain. The DUF619 domain is described as a putative distant homolog of the acetyltransferase, ArgA, predicted to function in NAG synthase association in fungi. Eukaryotic sequences have an N-terminal mitochondrial transit peptide. Members of this NAG kinase domain CD belong to th
Probab=99.47 E-value=1.4e-13 Score=137.49 Aligned_cols=112 Identities=21% Similarity=0.197 Sum_probs=87.9
Q ss_pred CCcccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehh-chHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRA-KHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~-~~~~~~~~~~~~~~ 79 (560)
|||++++. .+.+.+..++|+|++|+.+|.+|+|+.|+|+|||||||++ ++++|++++.. +..+.+. +.+
T Consensus 132 IPVi~p~~-~~~~g~~~nvnaD~~A~~lA~aL~a~kli~ltdv~GV~~~-----~g~~i~~i~~~~~~~~l~~----~~~ 201 (248)
T cd04252 132 LPILTSLA-ETPSGQLLNVNADVAAGELARVLEPLKIVFLNETGGLLDG-----TGKKISAINLDEEYDDLMK----QPW 201 (248)
T ss_pred eEEECCce-ECCCCCEEEECHHHHHHHHHHHcCCCeEEEEECCcccCCC-----CCCcccccCHHHHHHHHHH----cCC
Confidence 69999975 4543234569999999999999999999999999999975 37899999864 5544332 347
Q ss_pred ccCChHHHHHHHHHHHHC--CC-cEEEEeCCCCchhh-hhhcCCceeeEE
Q 008588 80 GRGGMTAKVNAAYCAACA--GI-PVVITSGFAMDSII-KVLEGKRVGTLF 125 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~--gi-~v~I~~g~~~~~i~-~~~~G~~~GT~~ 125 (560)
+||||.+|++++..+.+. ++ .++|++ ++.+. ++++.+..||.+
T Consensus 202 vtgGM~~Kl~~~~~~~~~~~~~~~v~i~~---~~~ll~elf~~~g~GT~i 248 (248)
T cd04252 202 VKYGTKLKIKEIKELLDTLPRSSSVSITS---PDDLQKELFTHSGAGTLI 248 (248)
T ss_pred cCCchHHHHHHHHHHHHhCCCceEEEEEC---CchHHHHHhcCCCCCccC
Confidence 999999999999999887 44 488887 56664 466666678863
No 188
>PRK05925 aspartate kinase; Provisional
Probab=99.46 E-value=1.6e-13 Score=147.16 Aligned_cols=110 Identities=23% Similarity=0.191 Sum_probs=92.4
Q ss_pred CCcccCCccccCCCCC----ceechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG----IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~----~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+.+ |. -+|+||++|+++|.+++||.++++|||||||++|| .+|+|++|++++++|+.+ +.. .
T Consensus 167 v~Vv~GF~g~~~~-G~~ttLgrGgsD~~AallA~~l~Ad~~~i~TdVdGvytaDP~~~~~A~~i~~is~~ea~e-la~-~ 243 (440)
T PRK05925 167 IYIMQGFIGANSS-GKTTVLGRGGSDFSASLIAELCKAREVRIYTDVNGIYTMDPKIIKDAQLIPELSFEEMQN-LAS-F 243 (440)
T ss_pred EEEecCcceeCCC-CCEEEeccCcHHHHHHHHHHHcCCCEEEEEEcCCccCCCCcCCCCCCeEeeEECHHHHHH-HHh-C
Confidence 5899999888764 53 26999999999999999999999999999999999 589999999999998875 432 2
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
++....++| .+.+.++|||++|.|+++|+ ..||++.+.
T Consensus 244 Ga~vl~~~~------~~~a~~~~Ipi~I~~~~~p~---------~~GT~i~~~ 281 (440)
T PRK05925 244 GAKVLHPPM------LKPCVRAGIPIFVTSTFDVT---------KGGTWIYAS 281 (440)
T ss_pred CCCcCCHHH------HHHHHHCCCcEEEecCCCCC---------CCccEEecC
Confidence 455666665 47889999999999999987 258888764
No 189
>PRK06635 aspartate kinase; Reviewed
Probab=99.46 E-value=1.4e-13 Score=147.53 Aligned_cols=110 Identities=22% Similarity=0.246 Sum_probs=91.8
Q ss_pred CCcccCCccccCCCCCc---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCC
Q 008588 1 MPVSFDNRNNFQDSSGI---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~ 76 (560)
|||++|++..+.+.... ++++|++|+++|..++||.|+++|||||||++|| .+|++++|++++++|+.+ +..
T Consensus 130 ipVi~g~~~~~~~g~~~~l~rg~sD~~A~~lA~~l~A~~l~~~tDV~Gv~~~dP~~~~~a~~i~~i~~~e~~~-l~~--- 205 (404)
T PRK06635 130 VVVVAGFQGVDEDGEITTLGRGGSDTTAVALAAALKADECEIYTDVDGVYTTDPRIVPKARKLDKISYEEMLE-LAS--- 205 (404)
T ss_pred EEEecCccEeCCCCCEEecCCCChHHHHHHHHHHhCCCEEEEEEcCCCCCcCCCCCCCCceECCccCHHHHHH-HHH---
Confidence 69999999888642322 3599999999999999999999999999999999 589999999999998875 331
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|.+..+..|+..+.++++|++|.|++++. .||++...
T Consensus 206 ----~g~~~~~~~a~~~~~~~~i~~~i~~~~~~~----------~gT~i~~~ 243 (404)
T PRK06635 206 ----LGAKVLHPRSVEYAKKYNVPLRVRSSFSDN----------PGTLITGE 243 (404)
T ss_pred ----cCCcccCHHHHHHHHHcCceEEEEcCCCCC----------CCCEEeeC
Confidence 245567889999999999999999987542 37887664
No 190
>cd04243 AAK_AK-HSDH-like AAK_AK-HSDH-like: Amino Acid Kinase Superfamily (AAK), AK-HSDH-like; this family includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK- homoserine dehydrogenase (HSDH). These aspartokinases are found in such bacteria as E. coli (AKI-HSDHI, ThrA and AKII-HSDHII, MetL) and in higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-
Probab=99.45 E-value=2e-13 Score=139.22 Aligned_cols=101 Identities=22% Similarity=0.337 Sum_probs=83.8
Q ss_pred CCcccCCccccCCCCCc--e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~--~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||+.|++..+.. |.. + +++|.+|+++|..++||.++++|||||||++|| .+|+|++|+++++.|+.+ +..
T Consensus 181 v~Vv~Gfig~~~~-G~~ttLGRggsD~~A~~~a~~l~a~~~~i~tdvdGiyt~dP~~~~~a~~i~~ls~~ea~~-l~~-- 256 (293)
T cd04243 181 VVVTQGFIASNED-GETTTLGRGGSDYSAALLAALLDAEEVEIWTDVDGVYTADPRKVPDARLLKELSYDEAME-LAY-- 256 (293)
T ss_pred EEEecCccccCCC-CCEEEeCCCCcHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHH-HHh--
Confidence 6999999987753 543 3 678999999999999999999999999999999 589999999999999985 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|..-| ...+...+.+++||++|.|+++|+
T Consensus 257 ---~Gakvl--~p~ai~~a~~~~i~i~i~~~~~p~ 286 (293)
T cd04243 257 ---FGAKVL--HPRTIQPAIRKNIPIFIKNTFNPE 286 (293)
T ss_pred ---CCCccc--CHHHHHHHHHCCCcEEEecCCCCC
Confidence 222222 235678899999999999999886
No 191
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.44 E-value=7.4e-13 Score=142.85 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=94.0
Q ss_pred cccCCccccCCCCCceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccccC
Q 008588 3 VSFDNRNNFQDSSGIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRG 82 (560)
Q Consensus 3 v~~gd~~~~~~~~~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tg 82 (560)
++.+++..+.+.+..++|+|++|+.+|.+|+|+.||++|||||||++ ++++|++|+.+++++.+.. ..|
T Consensus 163 pvi~pi~~~~~g~~~nvnaD~~A~~lA~al~a~kli~ltdv~Gv~~~-----~g~~i~~i~~~~~~~l~~~------~~~ 231 (429)
T TIGR01890 163 VLLSPLGHSPTGETFNLDMEDVATSVAISLKADKLIYFTLSPGISDP-----DGTLAAELSPQEVESLAER------LGS 231 (429)
T ss_pred EEECCcccCCCCCEEEeCHHHHHHHHHHHcCCCEEEEEeCCCcccCC-----CCCCcccCCHHHHHHHHHh------ccC
Confidence 34455677754334569999999999999999999999999999975 3789999998887764432 235
Q ss_pred C-hHHHHHHHHHHHHCCCc-EEEEeCCCCchhhh-hhcCCceeeEEecC
Q 008588 83 G-MTAKVNAAYCAACAGIP-VVITSGFAMDSIIK-VLEGKRVGTLFHRD 128 (560)
Q Consensus 83 g-M~~K~~aa~~~~~~gi~-v~I~~g~~~~~i~~-~~~G~~~GT~~~~~ 128 (560)
| |.+|+++|..+++.|++ ++|+||+.|+.+.. +++.+..||.+..+
T Consensus 232 ~~~~~kl~~a~~a~~~gv~~v~i~~g~~~~~l~~el~~~~g~GT~i~~d 280 (429)
T TIGR01890 232 ETTRRLLSAAVKACRGGVHRSHIVSYAEDGSLLQELFTRDGIGTSISKE 280 (429)
T ss_pred CCcHHHHHHHHHHHHcCCCeEEEECCCCCcHHHHHHhcCCCCcceEecc
Confidence 5 59999999999999975 99999999998755 56777789999876
No 192
>TIGR00656 asp_kin_monofn aspartate kinase, monofunctional class. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. The protein slr0657 from Synechocystis PCC6803 is extended by a duplication of the C-terminal region corresponding to the beta chain. Incorporation of a second copy of the C-terminal domain may be quite common in this subgroup of aspartokinases.
Probab=99.44 E-value=2.7e-13 Score=145.10 Aligned_cols=109 Identities=25% Similarity=0.261 Sum_probs=91.8
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|+...+.. |.. ++++|++|+.+|.+|+||.|+++|||||||++|| .+|++++|++++++|+.+...
T Consensus 131 vpVi~g~~~~~~~-g~~~~lgrg~sD~~A~~lA~~l~A~~l~i~tdV~Gv~~~DP~~~~~a~~i~~ls~~ea~~l~~--- 206 (401)
T TIGR00656 131 IVVVAGFQGATEK-GYTTTLGRGGSDYTAALLAAALKADRVDIYTDVPGVYTTDPRVVEAAKRIDKISYEEALELAT--- 206 (401)
T ss_pred EEEecCcceeCCC-CCEeecCCCcHHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCcEECCccCHHHHHHHHH---
Confidence 6999999887753 543 3589999999999999999999999999999999 589999999999999986332
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|....+..|+..+.++++|++|.|+++|+ .||++...
T Consensus 207 -----~G~~v~~~~a~~~a~~~~i~i~i~~~~~~~----------~gT~I~~~ 244 (401)
T TIGR00656 207 -----FGAKVLHPRTVEPAMRSGVPIEVRSSFDPE----------EGTLITNS 244 (401)
T ss_pred -----cCCcccCHHHHHHHHHCCCeEEEEECCCCC----------CCeEEEeC
Confidence 233467889999999999999999999885 27777553
No 193
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=99.44 E-value=1.8e-13 Score=137.22 Aligned_cols=111 Identities=17% Similarity=0.182 Sum_probs=94.6
Q ss_pred CCcccCCccccCCCCC-ceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeeh-hchHHHHhcCCCCc
Q 008588 1 MPVSFDNRNNFQDSSG-IFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSR 78 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~-~~~~~~~~~~~~~~ 78 (560)
|||+++ +..|.+ |. ..+|.|++|+.+|.+|+|+.||++||++|||++ +.++|++++. .++...+. ..
T Consensus 155 IPVisp-lg~~~~-G~~~NiNaD~~A~~lA~aL~A~KLIfltd~~GV~~~-----~g~lI~~l~~~~e~~~li~----~g 223 (271)
T cd04236 155 IPLVCP-IGETSS-GRSVSLDSSEVTTAIAKALQPIKVIFLNRSGGLRDQ-----KHKVLPQVHLPADLPSLSD----AE 223 (271)
T ss_pred eEEECC-ceECCC-CCEEEECHHHHHHHHHHHcCCCEEEEEeCCcceECC-----CCCCccccCcHHHHHHHHh----CC
Confidence 699999 467764 55 459999999999999999999999999999975 3789999995 78876554 45
Q ss_pred cccCCh---HHHHHHHHHHHHCCCcEEEEeCCCCchh-hhhhcCCceeeEE
Q 008588 79 VGRGGM---TAKVNAAYCAACAGIPVVITSGFAMDSI-IKVLEGKRVGTLF 125 (560)
Q Consensus 79 ~~tggM---~~K~~aa~~~~~~gi~v~I~~g~~~~~i-~~~~~G~~~GT~~ 125 (560)
.++||| ++|+++|..++..|+.|+|++ |+.+ .++++.+..||.|
T Consensus 224 ~i~gGm~~ki~ki~~~l~~l~~g~sv~I~~---~~~ll~elft~~g~GT~~ 271 (271)
T cd04236 224 WLSETEQNRIQDIATLLNALPSMSSAVITS---AETLLTELFSHKGSGTLF 271 (271)
T ss_pred EEcCCeeechHHHHHHHHhcccCCeEEEeC---hHHHHHHHhccCCCCCcC
Confidence 899999 999999999999999999998 6655 6688877788864
No 194
>PRK06291 aspartate kinase; Provisional
Probab=99.43 E-value=3.2e-13 Score=146.87 Aligned_cols=110 Identities=23% Similarity=0.311 Sum_probs=94.5
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||+.|++..+.+ |.. ++++|++|+.+|.+++||.|+++|||||||++|| ++|++++|+++++.|+.+ +..
T Consensus 190 vpVv~Gfig~~~~-g~~~tlgrggsD~~A~~~A~~l~a~~~~i~tdV~Gi~~~dP~~~~~a~~i~~l~~~ea~~-l~~-- 265 (465)
T PRK06291 190 IPVVTGFIGETEE-GIITTLGRGGSDYSAAIIGAALDADEIWIWTDVDGVMTTDPRIVPEARVIPKISYIEAME-LSY-- 265 (465)
T ss_pred EEEEeCcEEcCCC-CCEEEecCCChHHHHHHHHHhcCCCEEEEEECCCCCCCCCCCCCCCCeEccccCHHHHHH-HHh--
Confidence 6999999887653 432 3699999999999999999999999999999999 589999999999998875 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|.|..+..++..+.+++||++|.|+++|+ ..||++...
T Consensus 266 -----~G~~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~gt~i~~~ 304 (465)
T PRK06291 266 -----FGAKVLHPRTIEPAMEKGIPVRVKNTFNPE---------FPGTLITSD 304 (465)
T ss_pred -----CCCcccCHHHHHHHHHcCCcEEEecCCCCC---------CCceEEEec
Confidence 466888999999999999999999999885 348888654
No 195
>cd04257 AAK_AK-HSDH AAK_AK-HSDH: Amino Acid Kinase Superfamily (AAK), AK-HSDH; this CD includes the N-terminal catalytic domain of aspartokinase (AK) of the bifunctional enzyme AK - homoserine dehydrogenase (HSDH). These aspartokinases are found in bacteria (E. coli AKI-HSDHI, ThrA and E. coli AKII-HSDHII, MetL) and higher plants (Z. mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. ThrA and MetL are involved in threonine and methionine biosynthesis, respectively. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathway end products. Maize AK-HSDH is a Thr-sensitive 180-kD enzyme. Arabidopsis AK-HSDH is an alanine-act
Probab=99.42 E-value=2.9e-13 Score=138.06 Aligned_cols=101 Identities=21% Similarity=0.298 Sum_probs=82.2
Q ss_pred CCcccCCccccCCCCCc--e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~--~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|++..+. .|.. + +.+|.+|+++|..++||.++++|||||||+.|| .+|+|++|++|+++|+.+ +..
T Consensus 182 v~Vv~Gfig~~~-~G~~ttlGRGGSD~~A~~lA~~l~a~~l~i~tdVdGvyt~DP~~~~~A~~i~~is~~ea~~-l~~-- 257 (294)
T cd04257 182 VIVVTGFIASNP-QGETTTLGRNGSDYSAAILAALLDADQVEIWTDVDGVYSADPRKVKDARLLPSLSYQEAME-LSY-- 257 (294)
T ss_pred EEEecCcccCCC-CCCEEECCCCchHHHHHHHHHHhCCCEEEEEeCCCccCCCCCCCCCCCeEeceeCHHHHHH-HHh--
Confidence 699999988665 3543 2 678999999999999999999999999999999 589999999999998875 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|+.-|. ..+...+.+++||++|.|+++|+
T Consensus 258 ---~Gakv~h--~~~~~~a~~~~Ipi~i~~~~~p~ 287 (294)
T cd04257 258 ---FGAKVLH--PKTIQPVAKKNIPILIKNTFNPE 287 (294)
T ss_pred ---CCCcccC--HHHHHHHHHCCCCEEEeeCCCCC
Confidence 2222122 24556899999999999999886
No 196
>TIGR00657 asp_kinases aspartate kinase. The Lys-sensitive enzyme of Bacillus subtilis resembles the E. coli form but is an alpha 2/beta 2 heterotetramer, where the beta subunit is translated from an in-phase alternative initiator at Met-246. This may be a feature of a number of closely related forms, including a paralog from B. subtilis.
Probab=99.41 E-value=3.9e-13 Score=145.56 Aligned_cols=110 Identities=26% Similarity=0.314 Sum_probs=93.2
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||++|++..+.+ |.. ++++|++|+.+|.+++||.|+++|||||||++|| ..|++++|++++++|+.+ +..
T Consensus 170 vpVv~G~~g~~~~-g~~~~lgrggsD~~A~~lA~~l~a~~l~~~tDV~Gv~~~DP~~~~~a~~i~~is~~ea~e-l~~-- 245 (441)
T TIGR00657 170 IPVVAGFQGATEK-GETTTLGRGGSDYTAALLAAALKADECEIYTDVDGIYTTDPRIVPDARRIDEISYEEMLE-LAS-- 245 (441)
T ss_pred EEEEeCcEeeCCC-CCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCCCCCCeECCccCHHHHHH-HHh--
Confidence 6999999888764 543 2589999999999999999999999999999999 589999999999999885 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|-+..+..++..+.++++|++|.|+++|+ ..||++.+.
T Consensus 246 -----~G~~v~~~~a~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 284 (441)
T TIGR00657 246 -----FGAKVLHPRTLEPAMRAKIPIVVKSTFNPE---------APGTLIVAS 284 (441)
T ss_pred -----cCCcccCHHHHHHHHHcCCeEEEecCCCCC---------CCceEEEeC
Confidence 244667888999999999999999999874 248888765
No 197
>PRK08210 aspartate kinase I; Reviewed
Probab=99.41 E-value=4.6e-13 Score=143.38 Aligned_cols=109 Identities=22% Similarity=0.261 Sum_probs=89.9
Q ss_pred CCcccCCccccCCCCCc--e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~--~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|+++.+.+ |.. + +++|++|+.+|.+|+||.++++|||||||++|| ..|++++|++++++|+.+....
T Consensus 135 vpVi~G~~~~~~~-g~~~~l~rg~sD~~A~~lA~~l~A~~l~i~tDV~GV~~~dP~~~~~a~~i~~ls~~ea~~l~~~-- 211 (403)
T PRK08210 135 VVVVAGFQGVTEN-GDITTLGRGGSDTTAAALGVALKAEYVDIYTDVDGIMTADPRIVEDARLLDVVSYNEVFQMAYQ-- 211 (403)
T ss_pred EEEeeCeeecCCC-CCEEEeCCCchHHHHHHHHHHcCCCEEEEEECCCCCCcCCCCcCCCCeECCccCHHHHHHHHHC--
Confidence 6999999887764 543 3 489999999999999999999999999999999 4899999999999998863321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
|--..+..|+..+.++++|++|.|.+++. .||++...
T Consensus 212 ------G~~v~~~~a~~~~~~~~i~i~i~~~~~~~----------~gT~I~~~ 248 (403)
T PRK08210 212 ------GAKVIHPRAVEIAMQANIPLRIRSTYSDS----------PGTLITSL 248 (403)
T ss_pred ------CccccCHHHHHHHHHCCCeEEEEecCCCc----------CCcEEEec
Confidence 11245678999999999999999988642 28988765
No 198
>PRK08373 aspartate kinase; Validated
Probab=99.38 E-value=1.1e-12 Score=135.82 Aligned_cols=98 Identities=23% Similarity=0.215 Sum_probs=82.5
Q ss_pred CCcccCCccccCCCCCce----echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGIF----WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~----~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
|||++|+.. +. .|... +++|+.|+.+|..|+||.++++|||||||++|| ..|+|++|++++++|+.+ +.
T Consensus 169 VpVv~Gf~g-~~-~G~~ttLGRGGSD~tA~~lA~~L~A~~v~i~TDVdGVytaDP~~v~~A~~i~~isy~Ea~e-la--- 242 (341)
T PRK08373 169 VPVVPGFIG-NL-NGFRATLGRGGSDYSAVALGVLLNAKAVLIMSDVEGIYTADPKLVPSARLIPYLSYDEALI-AA--- 242 (341)
T ss_pred EEEEeCCcc-CC-CCeEEEcCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEcccCCHHHHHH-HH---
Confidence 699999987 54 35432 489999999999999999999999999999999 489999999999999984 42
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAM 109 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~ 109 (560)
++||..+...|...++.++|++|.|.++|
T Consensus 243 -----~~Gakvlhp~ai~~a~~~Ipi~v~~t~~~ 271 (341)
T PRK08373 243 -----KLGMKALHWKAIEPVKGKIPIIFGRTRDW 271 (341)
T ss_pred -----HCcChhhhHHHHHHHHcCCcEEEecCCCC
Confidence 67888887766655555999999987665
No 199
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=99.36 E-value=1.8e-12 Score=126.89 Aligned_cols=115 Identities=30% Similarity=0.445 Sum_probs=95.2
Q ss_pred CCcccCCccccCCCC-CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSS-GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~-~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
|||+.-..-+ +| ..++|.|..|++||.+++||.|+||||||+||-+. ..|+.+.|++++.+++++++.. ..|
T Consensus 195 IPVv~~~~~~---~GVeAVIDKDlasalLA~~i~AD~liILTdVd~Vy~n~-gkp~q~~L~~v~~~e~~~yl~e---g~F 267 (312)
T COG0549 195 IPVVEEGAGL---QGVEAVIDKDLASALLAEQIDADLLIILTDVDAVYVNF-GKPNQQALDRVTVDEMEKYLAE---GQF 267 (312)
T ss_pred cceEecCCCc---ceeeEEEccHHHHHHHHHHhcCCEEEEEeccchheecC-CCccchhhcccCHHHHHHHHhc---CCC
Confidence 4666544332 13 35899999999999999999999999999999864 3578999999999999987764 468
Q ss_pred ccCChHHHHHHHHHHHHC-CCcEEEEeCCCCchhhhhhcCCceeeEEe
Q 008588 80 GRGGMTAKVNAAYCAACA-GIPVVITSGFAMDSIIKVLEGKRVGTLFH 126 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~-gi~v~I~~g~~~~~i~~~~~G~~~GT~~~ 126 (560)
..|.|.||++||..+.++ |-+++|.+ ++++.+++.|+ .||.+.
T Consensus 268 a~GSM~PKVeAai~Fv~~~gk~A~Its---Le~~~~~l~g~-~GT~I~ 311 (312)
T COG0549 268 AAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGTVIV 311 (312)
T ss_pred CCCCccHHHHHHHHHHHcCCCceEECc---HHHHHHHhccC-CCcEec
Confidence 999999999999999986 56699987 78888888886 688875
No 200
>cd04245 AAK_AKiii-YclM-BS AAK_AKiii-YclM-BS: Amino Acid Kinase Superfamily (AAK), AKiii-YclM-BS; this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In Bacillus subtilis (BS), YclM is reported to be a single polypeptide of 50 kD. The Bacillus subtilis 168 AKIII is induced by lysine and repressed by threonine, and it is synergistically inhibited by lysine and threonine.
Probab=99.35 E-value=2.5e-12 Score=130.55 Aligned_cols=102 Identities=23% Similarity=0.230 Sum_probs=84.9
Q ss_pred CCcccCCccccCCCCCce---echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCCC
Q 008588 1 MPVSFDNRNNFQDSSGIF---WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGDK 76 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~---~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~~ 76 (560)
|||+.|....+.+...++ +.+|+.|+.+|..++||.+.++|||||||+.|| ..|+|+.|++++++|+.+ +..
T Consensus 176 v~Vv~Gf~g~~~~G~~ttLgRggSD~tAal~A~~l~A~~v~i~tdVdGvytaDPr~v~~A~~i~~lsy~EA~e-la~--- 251 (288)
T cd04245 176 KLVIPGFYGYSKNGDIKTFSRGGSDITGAILARGFQADLYENFTDVDGIYAANPRIVANPKPISEMTYREMRE-LSY--- 251 (288)
T ss_pred EEEEeCccccCCCCCEEEcCCCchHHHHHHHHHHcCCCEEEEEeCCCceECCCCCCCCCCeEeCccCHHHHHH-HHH---
Confidence 588999887765422334 599999999999999999999999999999999 589999999999999985 421
Q ss_pred CccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 77 SRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 77 ~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
+|..=|.+ .+...+.+++||++|.|.++|+
T Consensus 252 --~GakVlhp--~ai~~a~~~~Ipi~v~n~~~p~ 281 (288)
T cd04245 252 --AGFSVFHD--EALIPAIEAGIPINIKNTNHPE 281 (288)
T ss_pred --CCCcccCH--HHHHHHHHCCCcEEEeeCCCCC
Confidence 33444555 4888999999999999998886
No 201
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=99.34 E-value=2.8e-12 Score=131.04 Aligned_cols=109 Identities=22% Similarity=0.254 Sum_probs=88.7
Q ss_pred CCcccCCccccCCCCC-c-e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG-I-F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~-~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|+...+.+ |. + + +.+|..|+++|..++|+.++++|||||||+.|| .+|+|++|++|+++|+.+ +..
T Consensus 192 v~Vv~GFig~~~~-G~~ttLGRgGsD~~A~~la~~l~a~~v~i~tdVdGvyt~DP~~~~~a~~i~~is~~ea~e-l~~-- 267 (306)
T cd04247 192 VPVVTGFFGNVPG-GLLSQIGRGYTDLCAALCAVGLNADELQIWKEVDGIFTADPRKVPTARLLPSITPEEAAE-LTY-- 267 (306)
T ss_pred eEEeeccEecCCC-CCeEEeCCCchHHHHHHHHHHcCCCEEEEeecCCeeECCCCCCCCCCeEecccCHHHHHH-HHh--
Confidence 6899999887753 43 2 3 899999999999999999999999999999999 589999999999999985 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
.|..-+. ..+...+.+++||++|.|.++|+ ..||++.+
T Consensus 268 ---~GakVlH--p~ti~pa~~~~Ipi~i~nt~~P~---------~~GT~I~~ 305 (306)
T cd04247 268 ---YGSEVIH--PFTMEQVIKARIPIRIKNVENPR---------GEGTVIYP 305 (306)
T ss_pred ---CcCcccC--HHHHHHHHHcCCcEEEecCCCCC---------CCCcEEcC
Confidence 1222223 36788889999999999988875 34888754
No 202
>PRK07431 aspartate kinase; Provisional
Probab=99.34 E-value=2.9e-12 Score=143.58 Aligned_cols=110 Identities=23% Similarity=0.254 Sum_probs=89.3
Q ss_pred CCcccCCccccCC-CCC-c---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcC
Q 008588 1 MPVSFDNRNNFQD-SSG-I---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFG 74 (560)
Q Consensus 1 ~Pv~~gd~~~~~~-~~~-~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~ 74 (560)
|||++|+...+.+ .+. . ++++|++|+++|.+|+||.|+++|||||||++|| .+|++++|++++++|+.+ +.
T Consensus 130 vpVv~g~~g~~~~~~g~~~~lgrggsD~~A~~lA~~l~A~~l~i~TDVdGVyt~DP~~~~~a~~i~~i~~~e~~e-l~-- 206 (587)
T PRK07431 130 VVVVAGFQGISLSSNLEITTLGRGGSDTSAVALAAALGADACEIYTDVPGVLTTDPRLVPEAQLMDEISCDEMLE-LA-- 206 (587)
T ss_pred eEEecCCcCCCCCCCCCEeecCCCchHHHHHHHHHHcCCCEEEEEeCCCccCcCCCCCCCCCeECCCcCHHHHHH-HH--
Confidence 6999997554322 122 1 5789999999999999999999999999999999 589999999999998875 32
Q ss_pred CCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 75 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 75 ~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
..|+++|. ..|+..+.++|+|++|.|++. + ..||++.+.
T Consensus 207 ---~~G~~v~~--~~a~~~~~~~~i~i~i~~~~~-~---------~~GT~i~~~ 245 (587)
T PRK07431 207 ---SLGASVLH--PRAVEIARNYGVPLVVRSSWS-D---------APGTLVTSP 245 (587)
T ss_pred ---hCCCceEh--HHHHHHHHHcCCcEEEecCCC-C---------CCCeEEEeC
Confidence 24567777 689999999999999999872 1 248998765
No 203
>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins. The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process
Probab=99.34 E-value=6.5e-10 Score=118.36 Aligned_cols=244 Identities=16% Similarity=0.148 Sum_probs=164.5
Q ss_pred EEEeecceEEEEEEcC-CChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccc-cCcCcEEeec--C-Cc
Q 008588 241 LEKTSCPLGVLLIVFE-SRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVT--S-RE 315 (560)
Q Consensus 241 ~~~~~~PlGVV~~I~p-~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~a-lP~gvv~vv~--~-~~ 315 (560)
.+.++.|.|+|+.|.| |-|.+.++.++.+|.+||..|+|+|...|.++..|.+.+.+...+. +- ..+.++. + ..
T Consensus 81 ~~~~~~p~g~v~Hi~agNvp~~~~~S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~~~~~~l~-~~i~v~~~~~~d~ 159 (399)
T PF05893_consen 81 GYVRAFPRGLVFHIAAGNVPLVGFYSLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEIDPEHPLA-DSIAVVYWPGGDE 159 (399)
T ss_pred chhhccCCceEEEEcCCCccchHHHHHHHHHHhCCceEEECCCCchhHHHHHHHHHHhhCccchhh-hcEEEEEecCCch
Confidence 4677999999999999 5688889999999999999999999999999999999887632221 11 3456664 3 44
Q ss_pred hhhHhhcCCCCccEEEeecCHHHHHHHHHhcC-CCEEEecCc-cceEEEcCCCCHHHHHHHHHhhcC-CCCCcccccceE
Q 008588 316 EIPDLLKLDDVIDLVIPRGSNKLVSQIKESTK-IPVLGHADG-ICHVYVDKSANLDVAKNIVIDAKI-DYPAACNAMETL 392 (560)
Q Consensus 316 ~~~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~-~~~~lElGG-k~p~iV~~dADld~Aa~~iv~~~f-~n~g~C~a~~rv 392 (560)
++.+.+.. ..|+|+.+||.++.+.|.+... .+-.+.-|- .+-.||..+++++.+++.+..=.+ ++.+.|.|++.+
T Consensus 160 ~~~~~~~~--~~D~vv~wGgd~ti~~ir~~~~~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~i 237 (399)
T PF05893_consen 160 ELEEALSQ--QADAVVAWGGDETIRAIRQPLPPGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVI 237 (399)
T ss_pred HHHHHHHH--HCCEEEEeCCHHHHHHHHHHcCCCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEE
Confidence 55666653 5999999999999999977443 344444444 467788888899999988776555 445599999999
Q ss_pred EEeC---ccCCcchHHHHHHHHHhcCCeE-ec----Cc-------ccc-----------ccc--c-----C--CCCCccc
Q 008588 393 LVHK---DLACNGALNELVVELQHEGVGL-FG----GP-------RAS-----------KLL--Q-----I--PETRLFH 437 (560)
Q Consensus 393 ~V~~---~i~dd~f~~~l~~~~~~~~~~~-~g----~~-------~~~-----------~~~--p-----v--~~~~~~~ 437 (560)
||.. .-. ++|.++|.+++++..-.. .+ .. +.. ..+ + | .+.....
T Consensus 238 fv~~g~~~~~-~~f~~~L~~~L~~~~~~~p~~~~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~ 316 (399)
T PF05893_consen 238 FVETGDGDSV-EEFAERLAEALERAAERYPRGELSIDEAAAISSLRAEAELRYALDGEYRVWSSDDNSWTVIVSPEPPLL 316 (399)
T ss_pred EEECCCcccH-HHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCEEEEECCCcccc
Confidence 9993 333 478888877776541100 00 00 000 000 0 1 1111122
Q ss_pred ccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHh-hcCee
Q 008588 438 HEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLC-QVDSA 489 (560)
Q Consensus 438 eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~-~l~~G 489 (560)
..-++=.+.|.++++.+|++..+|...-=-|.+++... ++...+++ -..+|
T Consensus 317 ~~pl~r~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~~~-~~~~~~~~~l~~~G 368 (399)
T PF05893_consen 317 PSPLNRTVYVVPVDSLEELVPYLRPKRGLQTVGIYPWS-ERLEELARALAAAG 368 (399)
T ss_pred cCCCCCEEEEEEcCCHHHHHHHhhhcCCCeeEEEecCh-hhHHHHHHHHHhcC
Confidence 22234477899999999999999987431366776544 44555555 33444
No 204
>cd04258 AAK_AKiii-LysC-EC AAK_AKiii-LysC-EC: Amino Acid Kinase Superfamily (AAK), AKiii-LysC-EC: this CD includes the N-terminal catalytic aspartokinase (AK) domain of the lysine-sensitive aspartokinase isoenzyme AKIII. AKIII is a monofunctional class enzyme (LysC) found in some bacteria such as E. coli. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. In E. coli, LysC is reported to be a homodimer of 50 kD subunits.
Probab=99.33 E-value=3.9e-12 Score=129.39 Aligned_cols=101 Identities=23% Similarity=0.232 Sum_probs=84.0
Q ss_pred CCcccCCccccCCCCC-c---eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG-I---FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~---~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+.+ |. + +++||..|+.+|..++||.++++|||||||+.|| ++|+|++|+++++.|+.+ +..
T Consensus 180 v~Vv~Gf~g~~~~-G~~ttLGrggsD~~a~~~a~~l~a~~~~i~tdv~Gv~~~dP~~~~~a~~i~~isy~Ea~e-la~-- 255 (292)
T cd04258 180 VVVTQGFIGSTEK-GRTTTLGRGGSDYSAALLAEALHAEELQIWTDVAGIYTTDPRICPAARAIKEISFAEAAE-MAT-- 255 (292)
T ss_pred EEEECCccccCCC-CCEEecCCCchHHHHHHHHHHcCCCEEEEEECCCccCCCCCCCCCCCeEeceeCHHHHHH-HHH--
Confidence 5899999887754 43 2 5999999999999999999999999999999999 589999999999999985 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|..-| ...+...+.+++||++|.|.++|+
T Consensus 256 ---~Gakvl--hp~a~~~~~~~~ipi~i~~~~~p~ 285 (292)
T cd04258 256 ---FGAKVL--HPATLLPAIRKNIPVFVGSSKDPE 285 (292)
T ss_pred ---CCCccc--CHHHHHHHHHcCCcEEEEeCCCCC
Confidence 222223 336788889999999999998875
No 205
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.30 E-value=4.1e-12 Score=123.02 Aligned_cols=92 Identities=26% Similarity=0.331 Sum_probs=74.7
Q ss_pred CceechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHHHHHH
Q 008588 16 GIFWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAA 95 (560)
Q Consensus 16 ~~~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa~~~~ 95 (560)
..++|+|++|+++|..++|+.|+++|||||||++| +++|++|+..++.. .... .+|. ++.+.
T Consensus 111 ~~~~ttD~lAa~lA~~l~A~~Li~ltdVdGVy~~d-----a~~i~~i~~~e~~~-------~~~i-d~~~-----~~~~~ 172 (203)
T cd04240 111 SWEVTSDSIAAWLAKKLGAKRLVIVTDVDGIYEKD-----GKLVNEIAAAELLG-------ETSV-DPAF-----PRLLT 172 (203)
T ss_pred ccccCHHHHHHHHHHHcCCCEEEEEeCCccccCCC-----CcCccccCHHHhCC-------CCee-hhhH-----HHHHH
Confidence 45799999999999999999999999999999973 89999999765531 1111 1233 44567
Q ss_pred HCCCcEEEEeCCCCchhhhhhcCC-ceeeEE
Q 008588 96 CAGIPVVITSGFAMDSIIKVLEGK-RVGTLF 125 (560)
Q Consensus 96 ~~gi~v~I~~g~~~~~i~~~~~G~-~~GT~~ 125 (560)
++|++++|+||++|+++.+.+.|+ ..||++
T Consensus 173 ~~gi~v~I~~g~~~~~l~~~l~g~~~~GT~I 203 (203)
T cd04240 173 KYGIRCYVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred hCCCeEEEECCCCccHHHHHHCCCCCCCCCC
Confidence 899999999999999999999887 678863
No 206
>PRK04531 acetylglutamate kinase; Provisional
Probab=99.30 E-value=1.1e-11 Score=131.30 Aligned_cols=117 Identities=21% Similarity=0.163 Sum_probs=94.2
Q ss_pred CCcccCCccccCCCCCc-eechhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeeh-hchHHHHhcCCCCc
Q 008588 1 MPVSFDNRNNFQDSSGI-FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIR-AKHQAEITFGDKSR 78 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~-~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~-~~~~~~~~~~~~~~ 78 (560)
|||++... .+. .|.. ++|+|.+|+.+|.+|+|+.||++|||+|||+. ++++|++|+. ++....+. ..
T Consensus 131 IPVlsplg-~~~-~G~~~NvnaD~vA~~LA~aL~a~KLIfltdv~GV~d~-----~g~~i~~i~~~~e~~~l~~----~~ 199 (398)
T PRK04531 131 IPVIASLG-ETP-SGQILNINADVAANELVSALQPYKIIFLTGTGGLLDA-----DGKLISSINLSTEYDHLMQ----QP 199 (398)
T ss_pred EEEEeCcE-ECC-CCcEEEECHHHHHHHHHHHcCCCEEEEEECCCCccCC-----CCCCcccCCHHHHHHHHHh----cC
Confidence 69997754 333 3555 59999999999999999999999999999975 4789999986 45554332 34
Q ss_pred cccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhh-hhcCCceeeEEecC
Q 008588 79 VGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIK-VLEGKRVGTLFHRD 128 (560)
Q Consensus 79 ~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~-~~~G~~~GT~~~~~ 128 (560)
+++|||.+||++|..+++..-.++++++..|+.+.. +++.+..||.+...
T Consensus 200 ~vtgGM~~KL~~a~~al~~~~~~~~V~i~~~~~Ll~eLft~~G~GT~I~~g 250 (398)
T PRK04531 200 WINGGMKLKLEQIKELLDRLPLESSVSITSPSDLAKELFTHKGSGTLVRRG 250 (398)
T ss_pred CCCccHHHHHHHHHHHHhCCCcEEEEEecCCCHHHHHHccCCCCCeEEecC
Confidence 789999999999999997544588888888998855 66666789999886
No 207
>PRK09084 aspartate kinase III; Validated
Probab=99.28 E-value=9.5e-12 Score=134.51 Aligned_cols=110 Identities=23% Similarity=0.236 Sum_probs=88.8
Q ss_pred CCcccCCccccCCCCCc--e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~--~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|++..+.. |.. + +++|..|+.+|..++||.++++|||||||+.|| ..|+|++|++|+++|+.+ +..
T Consensus 176 v~Vv~Gf~g~~~~-G~~ttLgRggSD~~a~~~a~~l~a~~~~i~tdv~Gi~t~dP~~~~~a~~i~~is~~ea~e-la~-- 251 (448)
T PRK09084 176 VVVTQGFIGSDEK-GRTTTLGRGGSDYSAALLAEALNASRVEIWTDVPGIYTTDPRIVPAAKRIDEISFEEAAE-MAT-- 251 (448)
T ss_pred cEEecCeeecCCC-CCEeecCCCchHHHHHHHHHHcCCCEEEEEECCCccccCCCCCCCCCeEcccCCHHHHHH-HHh--
Confidence 6999999998764 542 3 799999999999999999999999999999999 589999999999999985 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|.. .-...+...+.++++|++|.|+++|+ ..||++...
T Consensus 252 ---~Ga~--vlh~~~~~~~~~~~i~i~i~~~~~~~---------~~GT~I~~~ 290 (448)
T PRK09084 252 ---FGAK--VLHPATLLPAVRSNIPVFVGSSKDPE---------AGGTWICND 290 (448)
T ss_pred ---CCCc--ccCHHHHHHHHHcCCcEEEEeCCCCC---------CCceEEecC
Confidence 1111 11235677788999999999998885 348887654
No 208
>PRK08961 bifunctional aspartate kinase/diaminopimelate decarboxylase protein; Provisional
Probab=99.27 E-value=7.2e-12 Score=145.79 Aligned_cols=101 Identities=23% Similarity=0.275 Sum_probs=89.5
Q ss_pred CCcccCCccccCCCCCc----eechhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI----FWDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~----~~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+.+ |.+ .+++|++|+.+|..++||.++++|||||||++|| .+|++++|++++++|+.+ +..
T Consensus 192 v~Vv~Gf~g~~~~-g~~ttLgrggsD~~A~~iA~~l~a~~~~i~tdv~Gv~t~dP~~~~~a~~i~~ls~~e~~e-l~~-- 267 (861)
T PRK08961 192 VLITQGFIARNAD-GGTALLGRGGSDTSAAYFAAKLGASRVEIWTDVPGMFSANPKEVPDARLLTRLDYDEAQE-IAT-- 267 (861)
T ss_pred EEEeCCcceeCCC-CCEEEEeCCchHHHHHHHHHHcCCCEEEEEeCCCccccCCCCCCCCceEecccCHHHHHH-HHH--
Confidence 5899999887764 432 4999999999999999999999999999999999 589999999999999885 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
.|+|..+..|+..+.++|||++|.|+++|+
T Consensus 268 -----~g~~v~~~~a~~~a~~~~i~i~v~~~~~~~ 297 (861)
T PRK08961 268 -----TGAKVLHPRSIKPCRDAGIPMAILDTERPD 297 (861)
T ss_pred -----CCCeEECHHHHHHHHHCCCCEEEEeCCCCC
Confidence 578999999999999999999999998874
No 209
>PRK09436 thrA bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional
Probab=99.27 E-value=1.1e-11 Score=142.94 Aligned_cols=110 Identities=21% Similarity=0.300 Sum_probs=92.5
Q ss_pred CCcccCCccccCCCCCc--e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~--~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|+..-+.+ |.. + +.+|.+|+++|..++||.++++|||||||+.|| .+|+|++|+++++.|+.+ +..
T Consensus 184 v~Vv~Gfig~~~~-G~~ttlGRgGSD~~A~~~A~~l~A~~~~i~tdVdGvyt~DP~~~~~A~~i~~isy~ea~e-l~~-- 259 (819)
T PRK09436 184 VILMPGFTAGNEK-GELVTLGRNGSDYSAAILAACLDADCCEIWTDVDGVYTADPRVVPDARLLKSLSYQEAME-LSY-- 259 (819)
T ss_pred EEEecCcccCCCC-CCEEEeCCCCchHHHHHHHHHcCCCEEEEEECCCceECCCCCCCCCCeEeeEecHHHHHH-HHh--
Confidence 6999999886653 543 3 568999999999999999999999999999999 589999999999999885 321
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|-+..+..|+..+.+++||++|.|+++|+ ..||++...
T Consensus 260 -----~G~kvlhp~a~~~a~~~~Ipi~i~n~~~p~---------~~GT~I~~~ 298 (819)
T PRK09436 260 -----FGAKVLHPRTIAPIAQFQIPCLIKNTFNPQ---------APGTLIGAE 298 (819)
T ss_pred -----cCCccchHHHHHHHHHCCceEEEccCCCCC---------CCceEEEec
Confidence 234677889999999999999999999886 347777653
No 210
>COG0527 LysC Aspartokinases [Amino acid transport and metabolism]
Probab=99.21 E-value=3.3e-11 Score=129.15 Aligned_cols=110 Identities=26% Similarity=0.382 Sum_probs=92.4
Q ss_pred CCcccCCccccCCCCC--ce--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~--~~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+++ |. ++ |.+|+.|+.||..++||.+.|+|||||||+.|| .-|+|++|++|+++|+.+ ++.
T Consensus 176 v~Vv~GF~G~~~~-G~~tTLGRGGSD~SA~~laa~l~Ad~~~I~TDVdGI~TaDPRiVp~Ar~i~~isyeEa~E-LA~-- 251 (447)
T COG0527 176 VPVVAGFQGINED-GETTTLGRGGSDYSAAALAAALGADEVEIWTDVDGVYTADPRIVPDARLLPEISYEEALE-LAY-- 251 (447)
T ss_pred EEEecCceeecCC-CCEEEeCCCcHHHHHHHHHHHcCCCEEEEEECCCCCccCCCCCCCcceEcCccCHHHHHH-HHH--
Confidence 6999999999875 54 35 889999999999999999999999999999999 589999999999999985 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.|.. .-...+...+.+++||++|.|.++|+ ..||++...
T Consensus 252 ---~GAk--VLHprav~pa~~~~Ip~~i~~t~~p~---------~~GTlI~~~ 290 (447)
T COG0527 252 ---LGAK--VLHPRAVEPAMRSGIPLRIKNTFNPD---------APGTLITAE 290 (447)
T ss_pred ---CCch--hcCHHHHHHHHhcCCcEEEEecCCCC---------CCceEEecC
Confidence 1121 12346888999999999999988886 369999887
No 211
>PRK09034 aspartate kinase; Reviewed
Probab=99.20 E-value=4e-11 Score=129.96 Aligned_cols=110 Identities=26% Similarity=0.308 Sum_probs=91.1
Q ss_pred CCcccCCccccCCCCC-c-e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSG-I-F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~-~-~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|....+.+ |. + + +.+|+.|+.+|.+++||.+.++|||||||+.|| ..|+|+++++++++|+.+ +..
T Consensus 176 v~Vv~GFig~~~~-g~~ttlgRggSD~tA~~la~~l~A~~~~i~tdV~Gi~taDPr~v~~A~~l~~lsy~Ea~e-la~-- 251 (454)
T PRK09034 176 KLVIPGFFGVTKD-GQIVTFSRGGSDITGAILARGVKADLYENFTDVDGIYAANPRIVKNPKSIKEITYREMRE-LSY-- 251 (454)
T ss_pred EEEecCccccCCC-CCEEecCCCcHHHHHHHHHHHcCCCEEEEEecCCccCcCCCCCCCCCeECCccCHHHHHH-HHh--
Confidence 6899999888764 53 3 3 899999999999999999999999999999999 589999999999999985 431
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
+|..=|.+ .+...+.+++||++|.|.++|+ ..||++...
T Consensus 252 ---~Gakvlhp--~ai~~a~~~~Ipi~v~~~~~p~---------~~GT~I~~~ 290 (454)
T PRK09034 252 ---AGFSVFHD--EALIPAYRGGIPINIKNTNNPE---------DPGTLIVPD 290 (454)
T ss_pred ---CCcccCCH--HHHHHHHHcCCCEEEEcCCCCC---------CCccEEEec
Confidence 33443555 4888899999999999988774 348888654
No 212
>PLN02551 aspartokinase
Probab=99.06 E-value=3.3e-10 Score=124.00 Aligned_cols=110 Identities=17% Similarity=0.202 Sum_probs=90.7
Q ss_pred CCcccCCcccc-CCCCC--ce--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcC
Q 008588 1 MPVSFDNRNNF-QDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFG 74 (560)
Q Consensus 1 ~Pv~~gd~~~~-~~~~~--~~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~ 74 (560)
|||+.|....+ .+ |. ++ +.+|..|+.+|..|+|+.+.|+|||||||+.|| ..|+|++|++++++|+.+ +.
T Consensus 234 v~Vv~GFig~~~~~-G~~ttLGRGGSD~sA~~la~~L~A~~v~I~tDV~Gi~taDPr~v~~A~~l~~lsy~Ea~e-lA-- 309 (521)
T PLN02551 234 VPVVTGFLGKGWKT-GAITTLGRGGSDLTATTIGKALGLREIQVWKDVDGVLTCDPRIYPNAVPVPYLTFDEAAE-LA-- 309 (521)
T ss_pred EEEEcCccccCCCC-CcEEecCCChHHHHHHHHHHHcCCCEEEEEeCCCceeCCCCCCCCCceEecccCHHHHHH-HH--
Confidence 68999998887 53 43 24 889999999999999999999999999999999 489999999999999985 43
Q ss_pred CCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 75 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 75 ~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
.+|..-+.| .+...+.+++||++|-|.++|+ ..||++...
T Consensus 310 ---~~GakVlhp--~ai~pa~~~~Ipi~vknt~~p~---------~~GT~I~~~ 349 (521)
T PLN02551 310 ---YFGAQVLHP--QSMRPAREGDIPVRVKNSYNPT---------APGTLITKT 349 (521)
T ss_pred ---hCCCcccCH--HHHHHHHHCCceEEEEecCCCC---------CCCcEEecc
Confidence 133443444 6788889999999999988774 458888654
No 213
>PRK09466 metL bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional
Probab=99.02 E-value=5.4e-10 Score=128.21 Aligned_cols=109 Identities=15% Similarity=0.138 Sum_probs=89.2
Q ss_pred CCcccCCccccCCCCCc--e--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcCC
Q 008588 1 MPVSFDNRNNFQDSSGI--F--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFGD 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~--~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~~ 75 (560)
+||+.|+...+.+ |.+ + +.+|+.|+.+|..|+||.+.|+|||||||+.|| ..|+|++|++|+++|+.+ +..
T Consensus 187 v~Vv~GF~g~~~~-G~~ttLGRGGSD~tA~~la~~l~A~~v~i~tDV~Gi~taDPr~v~~A~~i~~isy~Ea~e-la~-- 262 (810)
T PRK09466 187 RLVVTGFISRNEA-GETVLLGRNGSDYSATLIGALAGVERVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASE-LAR-- 262 (810)
T ss_pred EEEeeCccccCCC-CCEEEcCCChHHHHHHHHHHHcCCCEEEEEeCCCccccCCcccCCCceEcccCCHHHHHH-HHH--
Confidence 5899999887754 542 3 678999999999999999999999999999999 489999999999999985 432
Q ss_pred CCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEec
Q 008588 76 KSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHR 127 (560)
Q Consensus 76 ~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~ 127 (560)
+|..-+.| .+...+.+++||++|.|.++|+ ..||++..
T Consensus 263 ---~GakVlHp--~ti~pa~~~~Ipi~V~ntf~p~---------~~GT~I~~ 300 (810)
T PRK09466 263 ---LAAPVLHA--RTLQPVSGSDIDLQLRCSYQPE---------QGSTRIER 300 (810)
T ss_pred ---cCccccCH--HHHHHHHHcCCeEEEecCCCCC---------CCceEEec
Confidence 33333444 5778889999999999988775 34788764
No 214
>COG2054 Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases [General function prediction only]
Probab=98.96 E-value=1.2e-09 Score=100.25 Aligned_cols=95 Identities=24% Similarity=0.331 Sum_probs=78.1
Q ss_pred echhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHHHHHHHCC
Q 008588 19 WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAG 98 (560)
Q Consensus 19 ~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa~~~~~~g 98 (560)
+.+|.+|..+|.++++..+|++|||||||+++| +++++++|..+++.. +. ..-.+-.|| .+.+++
T Consensus 116 VTSDsis~~Ia~~~~~~~vv~aTDVdGI~~~~~---~~kLv~eI~A~dl~~----~~---t~vD~~~P~-----Ll~k~~ 180 (212)
T COG2054 116 VTSDSISVWIAAKAGATEVVKATDVDGIYEEDP---KGKLVREIRASDLKT----GE---TSVDPYLPK-----LLVKYK 180 (212)
T ss_pred ecccHHHHHHHHHcCCcEEEEEecCCcccccCC---cchhhhhhhHhhccc----Cc---ccccchhhH-----HHHHcC
Confidence 679999999999999999999999999999965 569999999888863 11 112333454 678899
Q ss_pred CcEEEEeCCCCchhhhhhcCC-ceeeEEecC
Q 008588 99 IPVVITSGFAMDSIIKVLEGK-RVGTLFHRD 128 (560)
Q Consensus 99 i~v~I~~g~~~~~i~~~~~G~-~~GT~~~~~ 128 (560)
+.++++||+.|+++.+++.|+ ..||.+...
T Consensus 181 m~~~Vvng~~pervi~~lrGk~~v~T~Ivg~ 211 (212)
T COG2054 181 MNCRVVNGKEPERVILALRGKEVVGTLIVGG 211 (212)
T ss_pred CceEEECCCCHHHHHHHHhccccceEEEeCC
Confidence 999999999999999999885 569988653
No 215
>cd04248 AAK_AK-Ectoine AAK_AK-Ectoine: Amino Acid Kinase Superfamily (AAK), AK-Ectoine; this CD includes the N-terminal catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and other various halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinase and L-aspartate-semialdehyde dehydrogenase. The M. alcaliphilum and the V. cholerae aspartokinases are encoded on the ectABCask operon.
Probab=98.87 E-value=3.8e-09 Score=106.90 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=80.2
Q ss_pred CCcccCCccccCCCCC--ce--echhHHHHHHHHHcCCCeEEEeecCCccccCCCC-C--CCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDNRNNFQDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~--~~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~-~--p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||+.|... +. .|. ++ +-+|..|+.+|.+++||.+.|.|||+ ||+.||+ . |+++.|++++++|+.+ +..
T Consensus 192 v~IvtGF~~-~~-~G~itTLGRGGSDyTAs~iAa~l~A~ev~I~TDV~-i~taDPriV~~~~A~~i~~lsY~EA~E-LA~ 267 (304)
T cd04248 192 LPIVTGYAK-CA-EGLMREFDRGYSEMTFSRIAVLTGASEAIIHKEFH-LSSADPKLVGEDKARPIGRTNYDVADQ-LAN 267 (304)
T ss_pred EEEeCCccC-CC-CCCEEEcCCCcHHHHHHHHHHHcCCCEEEEECCCc-eecCCCCccCCCCceEeCccCHHHHHH-HHH
Confidence 689999843 33 354 34 88999999999999999999999996 9999994 5 6999999999999985 431
Q ss_pred CCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCc
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMD 110 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~ 110 (560)
+|..-+.| .++..+.+++||++|.|.++|+
T Consensus 268 -----~GakvLHP--~ai~pa~~~~IPi~Vkntf~P~ 297 (304)
T cd04248 268 -----LGMEAIHP--KAAKGLRQAGIPLRVKNTFEPD 297 (304)
T ss_pred -----cChhhcCH--HHHHHHHHcCCeEEEecCCCCC
Confidence 23333333 6888999999999999988875
No 216
>PRK09181 aspartate kinase; Validated
Probab=98.83 E-value=6.4e-09 Score=112.84 Aligned_cols=108 Identities=20% Similarity=0.219 Sum_probs=86.3
Q ss_pred CCcccCCccccCCCCC--ce--echhHHHHHHHHHcCCCeEEEeecCCccccCCCC-C--CCCceeeeeehhchHHHHhc
Q 008588 1 MPVSFDNRNNFQDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPS-E--PNSKLIHTYIRAKHQAEITF 73 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~--~~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~-~--p~a~~i~~i~~~~~~~~~~~ 73 (560)
|||+.|... +. .|. ++ +-+|+.|+.+|..|+||.+.|+|||| ||+.||+ . |+|++|++++++|+.+ +..
T Consensus 198 v~Vv~GF~~-~~-~G~itTLGRGGSDyTAailAa~L~A~~~~IwTDV~-I~taDPriV~~~~A~~i~~lsy~Ea~E-LA~ 273 (475)
T PRK09181 198 LPIVTGYAK-CK-EGLMRTFDRGYSEMTFSRIAVLTGADEAIIHKEYH-LSSADPKLVGEDKVVPIGRTNYDVADQ-LAN 273 (475)
T ss_pred EEEecCCcC-CC-CCCEEecCCChHHHHHHHHHHHcCCCEEEEeCCCc-cccCCCCcCCCCCCeEcCccCHHHHHH-HHH
Confidence 589999863 33 343 24 88999999999999999999999997 9999994 6 7999999999999985 432
Q ss_pred CCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 74 GDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 74 ~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
+|..-+.| .+...+.+++||++|.|.++|+ ..||++...
T Consensus 274 -----~GAkVLHp--~ti~pa~~~~Ipi~V~nt~~p~---------~~GT~I~~~ 312 (475)
T PRK09181 274 -----LGMEAIHP--KAAKGLRQAGIPLRIKNTFEPE---------HPGTLITKD 312 (475)
T ss_pred -----cCchhcCH--HHHHHHHHcCCeEEEecCCCCC---------CCCeEEecC
Confidence 23332333 6788899999999999988775 359998654
No 217
>KOG2449 consensus Methylmalonate semialdehyde dehydrogenase [Amino acid transport and metabolism; Carbohydrate transport and metabolism]
Probab=98.81 E-value=1.8e-09 Score=94.55 Aligned_cols=68 Identities=16% Similarity=0.156 Sum_probs=65.2
Q ss_pred CCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhcCeeeEEEcCCcC
Q 008588 431 PETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQVDSAAVFHNASTR 498 (560)
Q Consensus 431 ~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l~~G~V~VN~~~~ 498 (560)
|.|.++.||+||||+..+.-+++||||.++|.++||-...|||.|.+.++++.+.+++|.+.+|.+..
T Consensus 76 P~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip 143 (157)
T KOG2449|consen 76 PNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIP 143 (157)
T ss_pred CCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceecccccc
Confidence 67999999999999999999999999999999999999999999999999999999999999997653
No 218
>PLN02825 amino-acid N-acetyltransferase
Probab=98.69 E-value=1.9e-07 Score=101.78 Aligned_cols=120 Identities=18% Similarity=0.223 Sum_probs=92.4
Q ss_pred CCcccCCccccCCCCCce-echhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCC----
Q 008588 1 MPVSFDNRNNFQDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGD---- 75 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~-~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~---- 75 (560)
|||+.- ...+. .|..| +|.|.+|+.+|.+|+||.||++||++ ++++ ++++|++++..+++..+....
T Consensus 171 Ipvisp-lg~s~-~Ge~~NinaD~vA~avA~aL~A~KLI~ltd~~-~~~~-----~g~li~~l~~~e~~~li~~~~~~~~ 242 (515)
T PLN02825 171 IVLLSN-LGYSS-SGEVLNCNTYEVATACALAIGADKLICIVDGP-ILDE-----NGRLIRFMTLEEADMLIRKRAKQSE 242 (515)
T ss_pred eEEECC-ceECC-CCCEEeeCHHHHHHHHHHHcCCCeEEEEeCcc-eecC-----CCCCcCcCCHHHHHHHHHhhhhcch
Confidence 566665 35554 36665 99999999999999999999999977 5544 478999999988876443210
Q ss_pred --------------------C-------------------------------C--------cc---------ccCChHHH
Q 008588 76 --------------------K-------------------------------S--------RV---------GRGGMTAK 87 (560)
Q Consensus 76 --------------------~-------------------------------~--------~~---------~tggM~~K 87 (560)
. + .+ .+.+..+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (515)
T PLN02825 243 IAANYVKAVGGEDYSYSLGLDSVNTTPFNNNGRGFWGSGSATDSFQNGVGFDNGNGLSGEQGFAIGGEERLSRLNGYLSE 322 (515)
T ss_pred hhhhhhhhccccccccccccccccccccccccccccccccccccccccccccCcccccccccccccchhhchhhhhHHHH
Confidence 0 0 00 22335568
Q ss_pred HHHHHHHHHCCCc-EEEEeCCCCchh-hhhhcCCceeeEEecC
Q 008588 88 VNAAYCAACAGIP-VVITSGFAMDSI-IKVLEGKRVGTLFHRD 128 (560)
Q Consensus 88 ~~aa~~~~~~gi~-v~I~~g~~~~~i-~~~~~G~~~GT~~~~~ 128 (560)
+.+|..+.+.|++ ++|+|+...+.+ .++++...+||.+..+
T Consensus 323 l~~a~~a~~~gv~r~hl~~~~~~gall~elft~dg~gt~i~~~ 365 (515)
T PLN02825 323 LAAAAFVCRGGVQRVHLLDGTIEGVLLLELFTRDGMGTMIASD 365 (515)
T ss_pred HHHHHHHHHcCCCeEEeccCCCCchHHHHhhccCCceeEeccC
Confidence 9999999999998 999999999987 5689988899998776
No 219
>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster. The function of this family is unknown.
Probab=98.57 E-value=4e-07 Score=87.19 Aligned_cols=172 Identities=15% Similarity=0.088 Sum_probs=113.9
Q ss_pred EEEcCCCCHHHHHHHHHhhcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeE--------------------e
Q 008588 360 VYVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGL--------------------F 419 (560)
Q Consensus 360 ~iV~~dADld~Aa~~iv~~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~--------------------~ 419 (560)
+||++|.||+.|+..++.+.- |.=...+.-.|+|||+|. |+|+++++.+++.+.-.+ .
T Consensus 8 MIvfe~GDlnsA~~~L~~sl~-~Pf~~~~VatVlVqEsir-eefi~rvr~~m~pl~~~va~Hpny~rsl~~i~~l~~~~I 85 (215)
T PF07368_consen 8 MIVFEDGDLNSAMHYLLESLH-NPFAPGAVATVLVQESIR-EEFIERVRSRMKPLSPQVANHPNYLRSLKKIKCLNAKTI 85 (215)
T ss_pred EEEEeCCCHHHHHHHHHHHHh-CcccCCcEEEEEEeHHHH-HHHHHHHHHhCccCChhhccCcHHHHHHHHHHhcCCeEE
Confidence 799999999999999998843 322344667899999999 699999999887653211 1
Q ss_pred -cCcccc--cccc-CCCCCcccccccC----ceEEEEEeCCHHHHHHHHHhc--CCCceeEEEecCHHHHHHHHhhcCee
Q 008588 420 -GGPRAS--KLLQ-IPETRLFHHEYNS----MVCTVEIVDDVRAAIDHIHQH--GSAHTDCIVAEDQKVAETFLCQVDSA 489 (560)
Q Consensus 420 -g~~~~~--~~~p-v~~~~~~~eE~FG----PVl~v~~~~~~deAi~~aN~~--~~GL~a~I~t~d~~~a~~~~~~l~~G 489 (560)
++.... .--| +.. .+.+-.|| +|+++-.|.+..||+++++.. +|+ +.|||++-+..+..++.++++.
T Consensus 86 ~~~~~~~~~~aSPilV~--d~~h~~fg~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~-SVsiW~ekla~~Yel~~~l~~~ 162 (215)
T PF07368_consen 86 VADFENVPPPASPILVC--DFTHSYFGDGPTGVITLHTFRTPKEAIELCAKETLPFD-SVSIWNEKLASAYELAARLPCD 162 (215)
T ss_pred EecccCCCCCCCCEEEc--CCCHHHcCCCCCeEEEEEccCCHHHHHHHHhcCCCCcc-eEEEeCcHHHHHHHHHHhCCCC
Confidence 100000 0002 100 12233333 589999999999999999975 676 9999999999999999999999
Q ss_pred eEEEcCCcCc-CCCCc-cCCccce-eccccCcccccccchhcceEEEEEEEcCc
Q 008588 490 AVFHNASTRF-CDGAR-FGLGAEV-GISTSRIHARGPVGVEGLLTTRWILRGNG 540 (560)
Q Consensus 490 ~V~VN~~~~~-~~~~p-fG~g~~s-G~~~~~~~~~G~~gl~~ft~~K~v~~~~~ 540 (560)
.++||+.... .+-.+ |.-.+.. =+. .++| -+.+.-.-+.|.|++..+
T Consensus 163 ~f~iNC~~V~L~PI~~~~~~~~~~v~i~-~gyH---YE~l~~~~~~k~IVFP~~ 212 (215)
T PF07368_consen 163 TFYINCFNVDLSPIMPFFAARKNDVLIA-NGYH---YETLTIGGKRKIIVFPIG 212 (215)
T ss_pred EEEEEeccCCchhhhhhhhcCCceEEEE-CCee---EEEEEECCeEEEEEEecc
Confidence 9999986532 22222 2211111 011 1112 245566667788877544
No 220
>KOG0456 consensus Aspartate kinase [Amino acid transport and metabolism]
Probab=98.26 E-value=6.9e-07 Score=90.98 Aligned_cols=110 Identities=18% Similarity=0.261 Sum_probs=82.5
Q ss_pred CCcccCCcc-ccCCCCC--ce--echhHHHHHHHHHcCCCeEEEeecCCccccCCC-CCCCCceeeeeehhchHHHHhcC
Q 008588 1 MPVSFDNRN-NFQDSSG--IF--WDNDSLAGLLALELKADLLVLLSDVEGLYSGPP-SEPNSKLIHTYIRAKHQAEITFG 74 (560)
Q Consensus 1 ~Pv~~gd~~-~~~~~~~--~~--~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP-~~p~a~~i~~i~~~~~~~~~~~~ 74 (560)
+||+.|.-. .-. .+. .+ |-+|..|+.++.++++|.+-++.|||||++.|| +.|.|++++.++++|..+ +..
T Consensus 261 VPVvTGf~Gk~~~-tg~lt~lGRG~sDl~At~i~~al~~~EiQVWKdVDGv~T~DP~~~p~Ar~vp~lT~dEAaE-LaY- 337 (559)
T KOG0456|consen 261 VPVVTGFLGKGWP-TGALTTLGRGGSDLTATTIGKALGLDEIQVWKDVDGVLTCDPRIYPGARLVPYLTFDEAAE-LAY- 337 (559)
T ss_pred cceEeeccccCcc-ccceecccCCchhhHHHHHHHHcCchhhhhhhhcCceEecCCccCCCccccCccCHHHHHH-HHh-
Confidence 689988754 111 122 22 779999999999999999999999999999999 799999999999999875 321
Q ss_pred CCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhcCCceeeEEecC
Q 008588 75 DKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLEGKRVGTLFHRD 128 (560)
Q Consensus 75 ~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~G~~~GT~~~~~ 128 (560)
+|.- .-.-...+.+.+..||+.|=|..+|- ..||++.++
T Consensus 338 ----fGaq--VlHP~sM~~~~~~~IPvRvKN~~NP~---------~~GTvI~~d 376 (559)
T KOG0456|consen 338 ----FGAQ--VLHPFSMRPAREGRIPVRVKNSYNPT---------APGTVITPD 376 (559)
T ss_pred ----hhhh--hccccccchhhccCcceEeecCCCCC---------CCceEeccc
Confidence 1111 11224556777889999998877663 348888775
No 221
>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=98.01 E-value=1.9e-05 Score=94.71 Aligned_cols=100 Identities=13% Similarity=0.199 Sum_probs=74.0
Q ss_pred CeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecCCchh
Q 008588 238 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 317 (560)
Q Consensus 238 ~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~ 317 (560)
|.....+..|.|++++|+||... ....++.||++||+||+||++.++. .++. +|..+.+.+. .
T Consensus 1069 GEsN~L~l~~RG~vlcisp~~~~-~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~~-----Lp~~~~~~~~----~ 1131 (1208)
T PRK11905 1069 GESNLLSLHPRGRVLCVADTEEA-LLRQLAAALATGNVAVVAADSGLAA-------ALAD-----LPGLVAARID----W 1131 (1208)
T ss_pred CcceeEEecCCceEEEECCcHHH-HHHHHHHHHHhCCEEEEeCCcccHH-------HHHh-----Cccccccccc----c
Confidence 44566778999999999999743 3456778999999999999999762 2221 7877666663 2
Q ss_pred hHhhcCCCCccEEEeecCHHHHHHHHHhcC------CCEEEec
Q 008588 318 PDLLKLDDVIDLVIPRGSNKLVSQIKESTK------IPVLGHA 354 (560)
Q Consensus 318 ~~~l~~~~~v~~V~fTGS~~~G~~i~~~a~------~~~~lEl 354 (560)
++.+..+++|+.|.||||+++.+.+.++.+ .|++.|.
T Consensus 1132 ~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~G~Ivpliaet 1174 (1208)
T PRK11905 1132 TQDWEADDPFAGALLEGDAERARAVRQALAARPGAIVPLIAAE 1174 (1208)
T ss_pred ccccccCCcccEEEEeCCHHHHHHHHHHHHhCCCCcceEEecC
Confidence 234556778999999999999998865532 4555555
No 222
>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine. In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.
Probab=96.48 E-value=1.2 Score=47.52 Aligned_cols=279 Identities=16% Similarity=0.175 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCC
Q 008588 208 KISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGG 281 (560)
Q Consensus 208 ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPs 281 (560)
-++.++++++.+.....+..... .....|.....++.|+--|++-.|- +|...++.+.||-.+|.. |+.-|.
T Consensus 69 Ai~~A~~~I~~fh~~q~~~~~~~--~~~~~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp 146 (412)
T PF00815_consen 69 AIEQAAENIRAFHEAQLPKKDWE--VETEPGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPP 146 (412)
T ss_dssp HHHHHHHHHHHHHHTT-----EE--EEEETTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-S
T ss_pred HHHHHHHHHHHHHHHhcCCCCcE--EEecCCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCC
Confidence 34556666666653222111000 0112466667789999999999992 454567888899999964 555564
Q ss_pred cc----hHHHHHHHHHHHHHhcccccCcCcEEeec-CCchhhHhhc----CCCCccEEEeecCHH--HHHHHHHh-cCCC
Q 008588 282 KE----AMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNK--LVSQIKES-TKIP 349 (560)
Q Consensus 282 e~----tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~v~~V~fTGS~~--~G~~i~~~-a~~~ 349 (560)
.. .|.+- ..+++ .|+=.+.. ||...-++|. +=|+||+|+==|..= .+|+.... .++-
T Consensus 147 ~~~G~i~p~vL-~Aa~~----------~Gv~evy~vGGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g~V~ID 215 (412)
T PF00815_consen 147 PKDGKINPAVL-AAAHL----------AGVDEVYKVGGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFGDVGID 215 (412)
T ss_dssp S------HHHH-HHHHH----------TT-SEEEE--HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHHS-EES
T ss_pred CccCCCCHHHH-HHHHH----------cCCCEEEecccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcCCcccC
Confidence 43 23221 11111 24444544 5433222222 237899998777643 33333221 1111
Q ss_pred EEEecCccce--EEEcCCCCHHHHHHHHHhhcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccc
Q 008588 350 VLGHADGICH--VYVDKSANLDVAKNIVIDAKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASK 426 (560)
Q Consensus 350 ~~lElGGk~p--~iV~~dADld~Aa~~iv~~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~ 426 (560)
-+-|-+= +|-+++||.+..+..++.-+=.... .| ++|..+ +++.+++.+++++.-..+
T Consensus 216 ---~~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd~~a~~-----vLvt~s---~~la~~V~~~v~~~l~~l-------- 276 (412)
T PF00815_consen 216 ---MIAGPSEVLVIADETANPEFVAADLLAQAEHDPDAQA-----VLVTTS---EELAEAVEAEVERQLEEL-------- 276 (412)
T ss_dssp ---------EEEEEE-TTS-HHHHHHHHHHHHTT-TT-EE-----EEEES----HHHHHHHHHHHHHHHTT---------
T ss_pred ---CCCCCCceEEEECCCCCHHHHHHHHHHHhccCCCCce-----EEEECC---HHHHHHHHHHHHHHHHhC--------
Confidence 1123222 4446789999988888766554333 23 455444 256666655555320000
Q ss_pred cccCCCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhhc-CeeeEEEcCCcCc------
Q 008588 427 LLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV-DSAAVFHNASTRF------ 499 (560)
Q Consensus 427 ~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l-~~G~V~VN~~~~~------ 499 (560)
+...+. ++.+. --.++.++|++||++++|.--- =-..|.++|.. ++..++ .+|.|++...+..
T Consensus 277 ----~r~~i~-~~sl~-~g~ii~~~~l~ea~~~~N~~AP-EHLel~~~~~~---~~~~~i~~AGaiFlG~~tp~a~GDY~ 346 (412)
T PF00815_consen 277 ----PRREIA-EKSLE-NGAIIVVDSLEEAIELANEYAP-EHLELQVEDPE---ELLEKIRNAGAIFLGEYTPEALGDYA 346 (412)
T ss_dssp ----TTHHHH-HHHHT-T-EEEE-SSHHHHHHHHHHH---SEEEEESTTHH---HHGGG--S-SEEEESTT--HHHHHHT
T ss_pred ----CchHHH-HHHHH-CCeEEEECCHHHHHHHHHHhhH-HHHHHHHcCHH---HHHHHhhccChhhcCCCCCHHHhhhc
Confidence 111111 22222 2346679999999999999642 35688999974 444444 6899999976531
Q ss_pred -CCC--CccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 500 -CDG--ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 500 -~~~--~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
.++ +|=+ |.. +..|..+...|+..-++..
T Consensus 347 aGpNHvLPT~-----G~A----R~~sgLsv~~FlK~~s~~~ 378 (412)
T PF00815_consen 347 AGPNHVLPTG-----GTA----RFSSGLSVDDFLKRISVQR 378 (412)
T ss_dssp SSS------T-----TGG----GT---S-GGGGEEEEEEEE
T ss_pred cCCCccCCCC-----ccc----cccCCCcHHHccceeeEEE
Confidence 111 2212 211 2346678889988766543
No 223
>COG0141 HisD Histidinol dehydrogenase [Amino acid transport and metabolism]
Probab=94.99 E-value=2.5 Score=44.93 Aligned_cols=224 Identities=13% Similarity=0.174 Sum_probs=128.1
Q ss_pred CCeeEEEeecceEEEEEEcC---C-ChhhHHHHHHHHHHhCCe--EEeeCCcc---hHHHHHHHHHHHHHhcccccCcCc
Q 008588 237 DGLILEKTSCPLGVLLIVFE---S-RPDALVQIASLAIRSGNG--LLLKGGKE---AMRSNAILHKVITSAIPDTVGEKL 307 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p---~-~P~~~~~~~~~ALaaGNt--vVlKPse~---tp~t~~~l~~l~~~al~~alP~gv 307 (560)
.|.....++.|+--|++-.| . ||...++...||-.+|+- |+.-|... .|.+- ..++++ |+
T Consensus 106 ~Gv~~g~~~~Pi~~VGlYVPGG~A~ypStvLM~avPAkvAGv~~Iv~~tPp~~~gv~p~iL-~AA~~~----------Gv 174 (425)
T COG0141 106 PGVVLGQRWRPIERVGLYVPGGKAAYPSTVLMNAVPAKVAGVEEIVVVTPPPKDGVNPEIL-AAARLA----------GV 174 (425)
T ss_pred CCcEEEEEEEEhhheEEEccCCCcCChHHHHHhhccHhhcCCceEEEECCCCCCCCCHHHH-HHHHHh----------Cc
Confidence 46667788999999999999 2 676667788899999985 45555553 33321 222221 32
Q ss_pred EEeec-CCchhhHhhcCC----CCccEEEeecCHHH--HHHHHHhcCCCEEEecCccce-EEEcCCCCHHHHHHHHHhhc
Q 008588 308 IGLVT-SREEIPDLLKLD----DVIDLVIPRGSNKL--VSQIKESTKIPVLGHADGICH-VYVDKSANLDVAKNIVIDAK 379 (560)
Q Consensus 308 v~vv~-~~~~~~~~l~~~----~~v~~V~fTGS~~~--G~~i~~~a~~~~~lElGGk~p-~iV~~dADld~Aa~~iv~~~ 379 (560)
=.+.. ||...-++|... |.||+|+==|..-+ +|+.... ..-+=+..|=..- +|-+++||.+..+..++.-+
T Consensus 175 ~eIy~vGGAQAIAAlAYGTetV~~VdkIvGPGN~yVtaAKr~v~g-~V~ID~~AGPSEvlViAD~ta~p~~vA~DLLsQA 253 (425)
T COG0141 175 DEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNAYVTAAKRLVSG-VVGIDMIAGPSEVLVIADETANPDFVAADLLSQA 253 (425)
T ss_pred HHHHHccCHHHHHHHHccCCcCCccCeeeCCCcHHHHHHHHHhhC-CcccCCCCCCceEEEEeCCCCCHHHHHHHHHHHh
Confidence 22333 554443444443 78999977776533 3322221 1111112222222 33456699999998887655
Q ss_pred CCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccc--cccCceEEEEEeCCHHHHH
Q 008588 380 IDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 380 f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~v~~~~~~deAi 457 (560)
=.... .+-++|..| ++|.+++.+++.+.--.+ + ..++..+ +-|| .|+-++|+|||+
T Consensus 254 EHd~~----a~aiLvT~s---~~la~~v~~~v~~~l~~l---~---------~~ei~~~~l~~~g---~iilv~~l~ea~ 311 (425)
T COG0141 254 EHDPD----AQAILVTDS---EELAEAVEAAVERQLETL---P---------RAEIARKALENYG---AIILVDDLDEAV 311 (425)
T ss_pred hcCCC----ceEEEEeCc---HHHHHHHHHHHHHHHHhc---c---------HHHHHHHHHHhCC---eEEEECCHHHHH
Confidence 44322 113566554 356666655554321001 1 1011111 1234 466789999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhhc-CeeeEEEcCCcC
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQV-DSAAVFHNASTR 498 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~l-~~G~V~VN~~~~ 498 (560)
+++|..- +--..|.++|... +..++ ++|.|++...+.
T Consensus 312 ~~~N~~A-PEHLei~~~~p~~---~l~~I~nAGsIFlG~~sP 349 (425)
T COG0141 312 EISNEYA-PEHLELQTENPRE---LLGKIRNAGSIFLGHYSP 349 (425)
T ss_pred HHHHhhC-hHhhhhhhcCHHH---HHHHhcccceeeecCCCC
Confidence 9999954 2355788988654 44444 689999998653
No 224
>PRK13770 histidinol dehydrogenase; Provisional
Probab=94.70 E-value=7.3 Score=41.68 Aligned_cols=253 Identities=11% Similarity=0.116 Sum_probs=134.7
Q ss_pred CCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCCcc---hHHHHHHHHHHHHHhcccccCcCc
Q 008588 237 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE---AMRSNAILHKVITSAIPDTVGEKL 307 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPse~---tp~t~~~l~~l~~~al~~alP~gv 307 (560)
.+.....++.|+--|++-.|- +|...++.+.||-.+|+. |+.-|... .|.+-. .+++ .|+
T Consensus 100 ~gv~~g~~~~Pi~rvGlYVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~----------~Gv 168 (416)
T PRK13770 100 ESVECYEIYHPLESVGIYVPGGKASYPSTVLMTATLAQVAGVENIVVVTPPQPNGVSQEVLA-ACYI----------TQV 168 (416)
T ss_pred CCcEEEEEEeeeeeeEEEccCCCCCccHHHHHhhccHhhcCCCeEEEEeCcCCCCCCHHHHH-HHHH----------cCC
Confidence 345556788999999999993 455567888899999986 44455432 333321 2222 243
Q ss_pred EEeec-CCchhhHhh----cCCCCccEEEeecCHHH--HHHHHHhcCCCEEEecCccce--EEEcCCCCHHHHHHHHHhh
Q 008588 308 IGLVT-SREEIPDLL----KLDDVIDLVIPRGSNKL--VSQIKESTKIPVLGHADGICH--VYVDKSANLDVAKNIVIDA 378 (560)
Q Consensus 308 v~vv~-~~~~~~~~l----~~~~~v~~V~fTGS~~~--G~~i~~~a~~~~~lElGGk~p--~iV~~dADld~Aa~~iv~~ 378 (560)
=.+.. ||...-++| .+-|+||+|+==|..=+ +|+.. .+.--+=-+-|-+= +|-+++||.+..+..++.-
T Consensus 169 ~eIy~iGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v--~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLaQ 246 (416)
T PRK13770 169 NQVFQVGGAQSIAALTYGTETIPKVDKIVGPGNQFVAYAKKYL--FGQVGIDQIAGPTEIALIIDETADLDAIVYDVFAQ 246 (416)
T ss_pred CeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHh--cCCcCcCCCCCCceeEEEecCCCCHHHHHHHHHHH
Confidence 34444 544322223 23478999976665432 33221 11100001123222 3446679999988888765
Q ss_pred cCCCCCcccccceEEEeC--ccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccc--cccCceEEEEEeCCHH
Q 008588 379 KIDYPAACNAMETLLVHK--DLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDDVR 454 (560)
Q Consensus 379 ~f~n~g~C~a~~rv~V~~--~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~v~~~~~~d 454 (560)
+=.... ..-++|.. ++. ++..+.+.++++.+ +...+.++ |-|| .|+-++|+|
T Consensus 247 AEHd~~----a~~iLvT~s~~la-~~V~~ev~~ql~~l----------------pr~~i~~~al~~~g---~ii~v~~~e 302 (416)
T PRK13770 247 AEHDEL----ARTYVISEDAQVL-KDLESRIAKALPNV----------------DRYDIVSKSIANQH---YLIHASNFD 302 (416)
T ss_pred hccCCC----CcEEEEeCCHHHH-HHHHHHHHHHHHhC----------------ChHHHHHHHHHhCC---EEEEECCHH
Confidence 543321 01233433 333 23333333333322 11111111 2244 345689999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhc-CeeeEEEcCCcCc--CC-----CCccCCccceeccccCcccccccch
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV-DSAAVFHNASTRF--CD-----GARFGLGAEVGISTSRIHARGPVGV 526 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l-~~G~V~VN~~~~~--~~-----~~pfG~g~~sG~~~~~~~~~G~~gl 526 (560)
||++++|.---= -.-|.++|.. ++..++ .+|.|++-..+.. .+ +.-++-+ |.. +..|..++
T Consensus 303 eai~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~---G~A----R~~sgLsv 371 (416)
T PRK13770 303 EACHVMNTIAPE-HASIQTVNPQ---PYIEKVKYVGALFIGHYSPEVIGDYVAGPSHVLPTN---RTA----RFTNGLSV 371 (416)
T ss_pred HHHHHHHhhChH-hheehhCCHH---HHHhhCCEeceeccCCCCchhhhccccCCCCcCCCC---cce----eccCCCcH
Confidence 999999996432 3468888874 445544 5899999765431 11 0001111 221 23466788
Q ss_pred hcceEEEEEEE
Q 008588 527 EGLLTTRWILR 537 (560)
Q Consensus 527 ~~ft~~K~v~~ 537 (560)
..|...-++..
T Consensus 372 ~~FlK~~s~~~ 382 (416)
T PRK13770 372 NDFLTRNTVIH 382 (416)
T ss_pred HHeecceeeEE
Confidence 88988766543
No 225
>KOG2436 consensus Acetylglutamate kinase/acetylglutamate synthase [Amino acid transport and metabolism]
Probab=94.29 E-value=0.035 Score=59.47 Aligned_cols=121 Identities=20% Similarity=0.196 Sum_probs=73.8
Q ss_pred CCcccCCccccCCCCCce-echhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCcc
Q 008588 1 MPVSFDNRNNFQDSSGIF-WDNDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRV 79 (560)
Q Consensus 1 ~Pv~~gd~~~~~~~~~~~-~~~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~ 79 (560)
||++..= ..+ ..|.+. ++.|++|..+|..|+|+.+++++|+.=+.+.+ .+.++-++..+....+...+-...
T Consensus 238 mp~L~sl-a~T-aSGqvlnvNa~~~a~elA~~L~~~kli~l~d~g~~l~e~-----ge~~S~l~l~~e~~~l~k~~qq~~ 310 (520)
T KOG2436|consen 238 MPLLRSL-AAT-ASGQVLNVNADEVAGELALALGPDKLILLMDKGRILKEN-----GEDISSLILQEEDAGLRKPSQQKN 310 (520)
T ss_pred chhehhh-ccc-CccceEEeeHHHHhhHHHhccCcceeEEecccccccccC-----cccccccccchhHhhhhhhhhhcc
Confidence 4555542 222 246665 99999999999999999999999983244444 455555554433322323333456
Q ss_pred ccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhh-hhhcCCceeeEEecC
Q 008588 80 GRGGMTAKVNAAYCAACAGIPVVITSGFAMDSII-KVLEGKRVGTLFHRD 128 (560)
Q Consensus 80 ~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~-~~~~G~~~GT~~~~~ 128 (560)
++++|..++.....+..-+-..+........++. .+++++..||.+...
T Consensus 311 ~a~~~v~aV~~~~~~~~p~~~s~~i~~~t~~n~~~~~~te~G~~t~~~~g 360 (520)
T KOG2436|consen 311 IAANNVKAVKDGIDSSLPRPSSYNIAITTQQNLIKELFTEKGAGTLISGG 360 (520)
T ss_pred cccccchhhhhheeeccCcCCCCCcceeecccccceeeccCCCCccccCc
Confidence 7888777777665553322223455555555553 355665567777664
No 226
>TIGR00069 hisD histidinol dehydrogenase. This model describes a polypeptide sequence catalyzing the final step in histidine biosynthesis, found sometimes as an independent protein and sometimes as a part of a multifunctional protein.
Probab=94.20 E-value=6.8 Score=41.62 Aligned_cols=255 Identities=15% Similarity=0.155 Sum_probs=137.3
Q ss_pred CCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCCc----chHHHHHHHHHHHHHhcccccCcC
Q 008588 237 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGK----EAMRSNAILHKVITSAIPDTVGEK 306 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPse----~tp~t~~~l~~l~~~al~~alP~g 306 (560)
.|.....++.|+--|++-.|. +|...++.+.||-.+|+. |+.-|.. -.|.+-. .+++ .|
T Consensus 78 ~Gv~~g~~~~Pi~rvGlYVPGG~a~~pStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~----------~G 146 (393)
T TIGR00069 78 PGVILGQRVRPLERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPGKDGKINPAVLA-AAKL----------AG 146 (393)
T ss_pred CCeEEEEEEEEeheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCcCCCCCHHHHH-HHHH----------cC
Confidence 456667789999999999994 455556778899999975 5555653 2333321 1222 24
Q ss_pred cEEeec-CCchhhHhhc----CCCCccEEEeecCHHH--HHHHHHhcCCCEEEecCccce--EEEcCCCCHHHHHHHHHh
Q 008588 307 LIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKESTKIPVLGHADGICH--VYVDKSANLDVAKNIVID 377 (560)
Q Consensus 307 vv~vv~-~~~~~~~~l~----~~~~v~~V~fTGS~~~--G~~i~~~a~~~~~lElGGk~p--~iV~~dADld~Aa~~iv~ 377 (560)
+=.+.. ||...-++|. +=|+||+|+=-|..=+ +|+.. .+.--+=-+-|-+= +|-+++||.+..+..++.
T Consensus 147 v~eIy~vGGAQAIAAlAyGTesIp~VDkIvGPGN~yV~~AK~~v--~g~V~ID~~AGPSEvlViAD~~Anp~~iAaDLLa 224 (393)
T TIGR00069 147 VDEVYKVGGAQAIAALAYGTETVPKVDKIVGPGNIYVTAAKKLV--FGDVGIDMPAGPSEVLVIADETANPEFVAADLLS 224 (393)
T ss_pred CCeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHh--cCccCcCCCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 444444 5543323332 3478999987776433 33321 12111111123322 344567999998888876
Q ss_pred hcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccccc--cCceEEEEEeCCHHH
Q 008588 378 AKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEY--NSMVCTVEIVDDVRA 455 (560)
Q Consensus 378 ~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~--FGPVl~v~~~~~~de 455 (560)
-+=.... .+-++|..+ .++.+++.+++++.-..+ +...+.++-+ +|= |+-++|+||
T Consensus 225 QAEHd~~----a~~iLvT~s---~~la~~V~~~v~~ql~~l------------~r~~i~~~al~~~g~---ii~v~~l~e 282 (393)
T TIGR00069 225 QAEHDPD----AQAILVTTS---EELAEAVQEEIERQLATL------------PRREIARKSLEDNGA---IILVDDLEE 282 (393)
T ss_pred HhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC------------ChHHHHHHHHHhCCE---EEEECCHHH
Confidence 5544322 112444433 244444444443210000 1111221111 443 456899999
Q ss_pred HHHHHHhcCCCceeEEEecCHHHHHHHHhh-cCeeeEEEcCCcCc--CC-----CCccCCccceeccccCcccccccchh
Q 008588 456 AIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD-----GARFGLGAEVGISTSRIHARGPVGVE 527 (560)
Q Consensus 456 Ai~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~V~VN~~~~~--~~-----~~pfG~g~~sG~~~~~~~~~G~~gl~ 527 (560)
|++++|..-- --..|.++|... +..+ -.+|.|++-..+.- .+ +.-++- +|.. +..|..+..
T Consensus 283 a~~~~N~~AP-EHLel~~~~p~~---~l~~I~nAGaiFlG~~tp~a~GDY~aG~NHvLPT---~G~A----r~~sgL~v~ 351 (393)
T TIGR00069 283 AIEISNDYAP-EHLELQTKNPEE---LLPKIRNAGSIFLGPYTPEAAGDYAAGPNHVLPT---GGTA----RFYSGLSVL 351 (393)
T ss_pred HHHHHHhhCh-HhheehhCCHHH---HHhhcCccceeccCCCCchhhhhccCCCCcccCC---Ccce----eecCCccHH
Confidence 9999999642 244688888743 4444 36899999765431 11 000111 1221 234677888
Q ss_pred cceEEEEEEE
Q 008588 528 GLLTTRWILR 537 (560)
Q Consensus 528 ~ft~~K~v~~ 537 (560)
.|.+.-++..
T Consensus 352 ~F~K~~s~~~ 361 (393)
T TIGR00069 352 DFLKRITVQR 361 (393)
T ss_pred HhccceeEEE
Confidence 8887766543
No 227
>cd06572 Histidinol_dh Histidinol dehydrogenase, HisD, E.C 1.1.1.23. Histidinol dehydrogenase catalyzes the last two steps in the L-histidine biosynthesis pathway, which is conserved in bacteria, archaea, fungi, and plants. These last two steps are (i) the NAD-dependent oxidation of L-histidinol to L-histidinaldehyde, and (ii) the NAD-dependent oxidation of L-histidinaldehyde to L-histidine. In most fungi and in the unicellular choanoflagellate Monosiga bevicollis, the HisD domain is fused with units that catalyze the second and third biosynthesis steps in this same pathway.
Probab=94.14 E-value=9.4 Score=40.65 Aligned_cols=255 Identities=15% Similarity=0.172 Sum_probs=139.4
Q ss_pred CCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCCcc----hHHHHHHHHHHHHHhcccccCcC
Q 008588 237 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE----AMRSNAILHKVITSAIPDTVGEK 306 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPse~----tp~t~~~l~~l~~~al~~alP~g 306 (560)
.|.....++.|+--|++-.|- +|...++.+.||-.||+. |+.-|... .|.+- ..+++ .|
T Consensus 82 ~G~~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL-~aa~~----------~G 150 (390)
T cd06572 82 PGVVLGQRYRPIERVGLYVPGGTAPYPSTVLMLAIPAKVAGVKEIVVVTPPRKDGKINPAIL-AAAKL----------AG 150 (390)
T ss_pred CCcEEEEEEEehhEEEEEecCCCCcchHHHHHhhcchhhcCCCeEEEEeCcCCCCCCCHHHH-HHHHH----------cC
Confidence 466677889999999999992 455566788899999975 55556532 23322 12222 24
Q ss_pred cEEeec-CCchhhHhhc----CCCCccEEEeecCHHH--HHHHHHhcCCCEEEecCccce--EEEcCCCCHHHHHHHHHh
Q 008588 307 LIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKESTKIPVLGHADGICH--VYVDKSANLDVAKNIVID 377 (560)
Q Consensus 307 vv~vv~-~~~~~~~~l~----~~~~v~~V~fTGS~~~--G~~i~~~a~~~~~lElGGk~p--~iV~~dADld~Aa~~iv~ 377 (560)
+=.+.. ||...-++|. +-|+||+|+=-|..=+ .|+.. .+.--+=-+-|-+= +|-+++||.+..+..++.
T Consensus 151 v~eiy~vGGaQAIAAlAyGTesi~~VDkIvGPGN~yV~~AK~~v--~g~V~ID~~AGPSEvlIiAD~~A~p~~vAaDLLa 228 (390)
T cd06572 151 VDEIYKVGGAQAIAALAYGTETIPKVDKIVGPGNIYVTAAKRLV--SGDVGIDMPAGPSEVLVIADETANPEFVAADLLS 228 (390)
T ss_pred CcEEeccCCHHHHHHHHcCCcCCCCCCEeeCCchHHHHHHHHHh--cCCcCccCCCCCceEEEEeCCCCCHHHHHHHHHh
Confidence 444555 5543333332 3588999987776433 22221 12111111123222 344566999998888876
Q ss_pred hcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccccccCceEEEEEeCCHHHHH
Q 008588 378 AKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAI 457 (560)
Q Consensus 378 ~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi 457 (560)
-+=.... ..-++|..+ .++.+++.+++++.-..+ +...+..+.+ .---.|+-++|+|||+
T Consensus 229 QAEH~~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l------------~r~~~~~~~~-~~~g~ii~~~~~~eai 288 (390)
T cd06572 229 QAEHDPD----SQAILVTTS---EELAEAVEEEVERQLAEL------------PRREIAAKSL-LDYGAIILVDDLEEAI 288 (390)
T ss_pred hhccCCC----CeEEEEECC---HHHHHHHHHHHHHHHHhC------------CcHHHHHHHH-HhCCEEEEECCHHHHH
Confidence 5543322 112445443 245555555544321000 1111211111 1112345689999999
Q ss_pred HHHHhcCCCceeEEEecCHHHHHHHHhh-cCeeeEEEcCCcCcC--C-------CCccCCccceeccccCcccccccchh
Q 008588 458 DHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRFC--D-------GARFGLGAEVGISTSRIHARGPVGVE 527 (560)
Q Consensus 458 ~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~V~VN~~~~~~--~-------~~pfG~g~~sG~~~~~~~~~G~~gl~ 527 (560)
+++|..-- --.-|+++|... +..+ -.+|.|++-..+.-. + -+|-+ |.. +..|..+..
T Consensus 289 ~~~N~~AP-EHLel~~~~~~~---~l~~i~nAGsiFlG~~tp~a~GDY~aGpNHvLPT~-----G~A----r~~sgL~v~ 355 (390)
T cd06572 289 ELANEYAP-EHLELQTEDPEE---LLEKIRNAGSIFLGPYTPEALGDYAAGPNHVLPTG-----GTA----RFYSGLSVD 355 (390)
T ss_pred HHHHhhch-hhheeHhcCHHH---HHhhCccceEEeecCCCchhhhccccCCCCccCCC-----cce----eecCCCCHH
Confidence 99999642 345788888754 4444 468999997654311 1 12222 222 234677888
Q ss_pred cceEEEEEEE
Q 008588 528 GLLTTRWILR 537 (560)
Q Consensus 528 ~ft~~K~v~~ 537 (560)
.|+..-++..
T Consensus 356 ~F~K~~s~~~ 365 (390)
T cd06572 356 DFLKRITVQE 365 (390)
T ss_pred HheecceeEE
Confidence 9988766543
No 228
>PRK00877 hisD bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed
Probab=93.73 E-value=12 Score=40.33 Aligned_cols=279 Identities=16% Similarity=0.180 Sum_probs=147.0
Q ss_pred HHHHHHHHHHHhcccccccccccccccCCCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCCc
Q 008588 209 ISSLAKSIRILADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGK 282 (560)
Q Consensus 209 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPse 282 (560)
++.+.+.++.+.....+..... . ...|...-.++.|+--|++-.|. ||...++.+.||-.||+- |+.-|..
T Consensus 85 i~~A~~~I~~Fh~~q~~~~~~~--~-~~~Gv~~g~~~~Pi~~vG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~ 161 (425)
T PRK00877 85 LEEAAENIRAFHEAQKPESWDV--E-TAPGVRLGQRWRPIERVGLYVPGGKAAYPSSVLMNAIPAKVAGVKEIVMVTPPP 161 (425)
T ss_pred HHHHHHHHHHHHHHhCCCCeEE--E-ecCCeEEEEEEEehHHeEEEccCCCCCchHHHHHhhcchhhcCCCeEEEEeCCC
Confidence 4455566666543222211111 0 12455666788999999999993 455567888899999975 5555653
Q ss_pred ---chHHHHHHHHHHHHHhcccccCcCcEEeec-CCchhhHhhc----CCCCccEEEeecCHH--HHHHHHHh-cCCCEE
Q 008588 283 ---EAMRSNAILHKVITSAIPDTVGEKLIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNK--LVSQIKES-TKIPVL 351 (560)
Q Consensus 283 ---~tp~t~~~l~~l~~~al~~alP~gvv~vv~-~~~~~~~~l~----~~~~v~~V~fTGS~~--~G~~i~~~-a~~~~~ 351 (560)
-.|.+-. .+++ .|+=.+.. ||...-++|. +=|+||+|+=-|..= .+|+.... .+.-
T Consensus 162 ~g~i~p~vL~-AA~~----------~Gv~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID-- 228 (425)
T PRK00877 162 DGEINPAILA-AAAL----------AGVDEVYKVGGAQAIAALAYGTESIPKVDKIVGPGNIYVTAAKRLVFGVVGID-- 228 (425)
T ss_pred CCCCCHHHHH-HHHH----------cCCCeeeccCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHHcCCcCcC--
Confidence 2333221 1222 24444444 5543323332 347899998777643 33332211 1111
Q ss_pred EecCccce-E-EEcCCCCHHHHHHHHHhhcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCcccccccc
Q 008588 352 GHADGICH-V-YVDKSANLDVAKNIVIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQ 429 (560)
Q Consensus 352 lElGGk~p-~-iV~~dADld~Aa~~iv~~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~p 429 (560)
-+-|-+= + |-+++||.+..+..++.-+=.... ..-++|..| .++.+++.+++++.-..+ ++
T Consensus 229 -~~AGPSEvlViAD~~Anp~~vAaDLLaQAEHd~~----a~aiLvT~s---~~la~~V~~~v~~ql~~l---~r------ 291 (425)
T PRK00877 229 -MIAGPSEILVIADETADPDFVAADLLSQAEHDPD----AQSILVTTS---EELAEAVAAEVERQLATL---PR------ 291 (425)
T ss_pred -CCCCCceeEEEeCCCCCHHHHHHHHHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC---Ch------
Confidence 1123322 3 335569999998888876554322 112444333 244444444443210000 11
Q ss_pred CCCCCcccc--cccCceEEEEEeCCHHHHHHHHHhcCCCceeEEEecCHHHHHHHHhh-cCeeeEEEcCCcCc--CC---
Q 008588 430 IPETRLFHH--EYNSMVCTVEIVDDVRAAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD--- 501 (560)
Q Consensus 430 v~~~~~~~e--E~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~V~VN~~~~~--~~--- 501 (560)
..+.++ |-||= |+-++|+|||++++|..-- =-..|.++|... +..+ -.+|.|++-..+.- .+
T Consensus 292 ---~~ia~~sl~~~g~---iivv~~leeai~~~N~~AP-EHLel~~~~p~~---~l~~I~nAGaiFlG~~tp~a~GDY~a 361 (425)
T PRK00877 292 ---AEIARASLEGQGA---IILVDDLEEAIELSNAYAP-EHLEIQTEDPRA---LLDRIRNAGAIFLGPYTPESLGDYAA 361 (425)
T ss_pred ---HHHHHHHHHhCCE---EEEECCHHHHHHHHHhhCh-HheeehhCCHHH---HHhhcCccceeccCCCCchhhhhccc
Confidence 111111 11554 4568999999999999542 345688988754 4443 46899999764431 11
Q ss_pred --CCccCCccceeccccCcccccccchhcceEEEEEEE
Q 008588 502 --GARFGLGAEVGISTSRIHARGPVGVEGLLTTRWILR 537 (560)
Q Consensus 502 --~~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~~ 537 (560)
+.-++- +|.. +..|..++..|...-++..
T Consensus 362 GpNHvLPT---~G~A----R~~sgLsV~~F~K~~s~~~ 392 (425)
T PRK00877 362 GPNHVLPT---SGTA----RFSSGLSVYDFLKRSSVIE 392 (425)
T ss_pred CCCcccCC---Ccce----eecCCccHHHhccceeEEE
Confidence 101111 1222 2347788889988766543
No 229
>PLN02926 histidinol dehydrogenase
Probab=93.58 E-value=12 Score=40.17 Aligned_cols=255 Identities=15% Similarity=0.158 Sum_probs=138.4
Q ss_pred CCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCCcc----hHHHHHHHHHHHHHhcccccCcC
Q 008588 237 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE----AMRSNAILHKVITSAIPDTVGEK 306 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPse~----tp~t~~~l~~l~~~al~~alP~g 306 (560)
.|.....++.|+.-|++-.|. +|...++.+.||-.||+. |+.-|... .|.+-. .+++ .|
T Consensus 110 ~Gv~~g~~~~Pi~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~g~i~p~iL~-AA~~----------~G 178 (431)
T PLN02926 110 PGVRCRRVARPIGAVGLYVPGGTAVLPSTALMLAVPAQIAGCKTVVLATPPRKDGSICPEVLY-CAKK----------AG 178 (431)
T ss_pred CCeEEEEEEechHHeeEeccCCCCCccHHHHHhhcchhhcCCCeEEEEECCCcCCCCCHHHHH-HHHH----------cC
Confidence 456667789999999999994 455567888899999975 55566532 333321 1122 24
Q ss_pred cEEeec-CCchhhHhhc----CCCCccEEEeecCHHH--HHHHHHhcCC---CEEEecCccce--EEEcCCCCHHHHHHH
Q 008588 307 LIGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKESTKI---PVLGHADGICH--VYVDKSANLDVAKNI 374 (560)
Q Consensus 307 vv~vv~-~~~~~~~~l~----~~~~v~~V~fTGS~~~--G~~i~~~a~~---~~~lElGGk~p--~iV~~dADld~Aa~~ 374 (560)
+=.+.. ||...-++|. +=|+||+|+=-|..=| +|+.. .+. --+=-+-|-+= +|-+++||.+.++..
T Consensus 179 v~eIy~vGGaQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v--~G~~~~VgID~~AGPSEvlIiAD~tA~p~~vAaD 256 (431)
T PLN02926 179 VTHILKAGGAQAIAAMAWGTDSCPKVDKIFGPGNQYVTAAKMIL--QNSEAMVSIDMPAGPSEVLVIADKTANPVHVAAD 256 (431)
T ss_pred CCeeeccCCHHHHHHHHcCCCCCCCCCEEECCCcHHHHHHHHHh--hCCCCccccCCCCCCceeEEEeCCCCCHHHHHHH
Confidence 444544 5543222332 3478999987776433 33321 122 11111223332 333556999999888
Q ss_pred HHhhcCCCCCcccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccccccCceEEEEEeCCHH
Q 008588 375 VIDAKIDYPAACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVR 454 (560)
Q Consensus 375 iv~~~f~n~g~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~d 454 (560)
++.-+=.... ..-++|..+ .++.+++.+++++.-..+ +...+. ++.+.- -.|+-++|+|
T Consensus 257 LLaQAEHdp~----a~aiLvT~s---~~la~~V~~~v~~ql~~l------------~r~~i~-~~sl~~-g~iivv~~l~ 315 (431)
T PLN02926 257 LLSQAEHGPD----SQVVLVAVG---DVDLDAIEEEVEKQCQSL------------PRGEIA-SKALGH-SFIVVARDMA 315 (431)
T ss_pred HHHHhccCCC----CcEEEEECC---HHHHHHHHHHHHHHHHhC------------ChHHHH-HHHHHC-CEEEEECCHH
Confidence 8765544322 112444443 244444444443210000 111122 222222 3567799999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhh-cCeeeEEEcCCcCc--CC-----CCccCCccceeccccCcccccccch
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQ-VDSAAVFHNASTRF--CD-----GARFGLGAEVGISTSRIHARGPVGV 526 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~-l~~G~V~VN~~~~~--~~-----~~pfG~g~~sG~~~~~~~~~G~~gl 526 (560)
||++++|.--- --..|+++|... +..+ -.+|.|++...+.. .+ +.-++-+ |.. +..|..+.
T Consensus 316 ea~~~~N~~AP-EHLei~~~~~~~---~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT~---G~A----R~~sgLsv 384 (431)
T PLN02926 316 EAISFSNLYAP-EHLIVNVEDAES---WLDKIDNAGSVFLGRWTPESVGDYASGTNHVLPTY---GYA----RMYGGVSL 384 (431)
T ss_pred HHHHHHHhhCh-HhheehhcCHHH---HHhhcCccceeccCCCCchhhhccccCcCcccCCC---cce----eecCCCcH
Confidence 99999999542 244688888754 4444 46899999654431 11 0001111 211 23467788
Q ss_pred hcceEEEEEE
Q 008588 527 EGLLTTRWIL 536 (560)
Q Consensus 527 ~~ft~~K~v~ 536 (560)
..|.+.-++.
T Consensus 385 ~~FlK~~s~~ 394 (431)
T PLN02926 385 DSFLKYMTVQ 394 (431)
T ss_pred HHhcceeeEE
Confidence 8898866654
No 230
>PRK12447 histidinol dehydrogenase; Reviewed
Probab=93.04 E-value=15 Score=39.52 Aligned_cols=252 Identities=15% Similarity=0.126 Sum_probs=136.1
Q ss_pred CCeeEEEeecceEEEEEEcCC----ChhhHHHHHHHHHHhCCe--EEeeCCcc---hHHHHHHHHHHHHHhcccccCcCc
Q 008588 237 DGLILEKTSCPLGVLLIVFES----RPDALVQIASLAIRSGNG--LLLKGGKE---AMRSNAILHKVITSAIPDTVGEKL 307 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p~----~P~~~~~~~~~ALaaGNt--vVlKPse~---tp~t~~~l~~l~~~al~~alP~gv 307 (560)
.|.....++.|+--|++-.|- +|...++.+.||-.+|+. |+.-|... .|.+-. .+++ .|+
T Consensus 105 ~Gv~~g~~~~Pl~rvG~YVPGG~a~ypStvLM~aiPAkvAGV~~Iv~~TPp~~~~i~p~iL~-Aa~~----------~Gv 173 (426)
T PRK12447 105 PGVILGHRNIPVNSVGCYVPGGRYPLVASAHMSVLTAKVAGVKRVIACTPPFPGEPPPAIVA-AMHL----------AGA 173 (426)
T ss_pred CCeEEEEEEeehheEEEEeCCCCCcchHHHHHhhcchhhcCCCeEEEEeCCCCCCCCHHHHH-HHHH----------cCC
Confidence 455666788999999999992 455567788899999975 45555532 232211 1122 244
Q ss_pred EEeec-CCchhhHhhc----CCCCccEEEeecCHHH--HHHHHH-hcCCCEEEecCccce--EEEcCCCCHHHHHHHHHh
Q 008588 308 IGLVT-SREEIPDLLK----LDDVIDLVIPRGSNKL--VSQIKE-STKIPVLGHADGICH--VYVDKSANLDVAKNIVID 377 (560)
Q Consensus 308 v~vv~-~~~~~~~~l~----~~~~v~~V~fTGS~~~--G~~i~~-~a~~~~~lElGGk~p--~iV~~dADld~Aa~~iv~ 377 (560)
=.+.. ||...-++|. +=|+||+|+=-|..=+ +|+... ..+.-. +-|-+= +|-+++||.+..+..++.
T Consensus 174 ~eIy~vGGAQAIAAlAyGTetIp~VDkIvGPGN~yV~~AK~~v~g~V~ID~---~AGPSEvlViAD~~Anp~~vAaDLLa 250 (426)
T PRK12447 174 DEIYVLGGVQAVAAMAYGTETIKPVDMLVGPGNAYVAEAKRQLFGRVGIDL---FAGPTETLVIADDTADPELVATDLLG 250 (426)
T ss_pred CeehhcCCHHHHHHHHcCCCCCCCCcEEECCCcHHHHHHHHHhcCccCcCC---CCCCceeEEEeCCCCCHHHHHHHHHH
Confidence 44444 5543222332 3478999987776533 333211 111111 123222 344567999998888876
Q ss_pred hcCCCCC-cccccceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccc--cccCceEEEEEeCCHH
Q 008588 378 AKIDYPA-ACNAMETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHH--EYNSMVCTVEIVDDVR 454 (560)
Q Consensus 378 ~~f~n~g-~C~a~~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~e--E~FGPVl~v~~~~~~d 454 (560)
-+=.... .| ++|..+ .++.+++.+++++.-..+ ++ ..+.++ +-+|= |+-++|+|
T Consensus 251 QAEHd~~a~~-----iLvT~s---~~la~~V~~~v~~ql~~l---~r---------~~i~~~sl~~~g~---ii~v~~l~ 307 (426)
T PRK12447 251 QAEHGPNSPA-----VLITTS---RKLAEEVLAEIERLLAIL---PT---------ADVASAAWRDYGE---VILCDDLE 307 (426)
T ss_pred HhccCCCCce-----EEEECC---HHHHHHHHHHHHHHHHhC---CH---------HHHHHHHHHhCCE---EEEECCHH
Confidence 5554322 22 444333 244444444443210000 11 011111 12443 45689999
Q ss_pred HHHHHHHhcCCCceeEEEecCHHHHHHHHhhc-CeeeEEEcCCcCc--CC-----CCccCCccceeccccCcccccccch
Q 008588 455 AAIDHIHQHGSAHTDCIVAEDQKVAETFLCQV-DSAAVFHNASTRF--CD-----GARFGLGAEVGISTSRIHARGPVGV 526 (560)
Q Consensus 455 eAi~~aN~~~~GL~a~I~t~d~~~a~~~~~~l-~~G~V~VN~~~~~--~~-----~~pfG~g~~sG~~~~~~~~~G~~gl 526 (560)
||++++|..--= -..|.++|.. .+..++ .+|.|++-..+.. .+ +.-++- +|.. +..|..+.
T Consensus 308 ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaiFlG~~sp~a~GDY~aGpNHvLPT---~G~A----r~~sgLsv 376 (426)
T PRK12447 308 EMVAEADRYASE-HVQVMTEDPD---WFLENMTNYGALFLGERTNVAYGDKVIGTNHVLPT---SGAA----RYTGGLWV 376 (426)
T ss_pred HHHHHHHhhChH-heeehhCCHH---HHHhhcCccceeccCCCCchhhhhcccCCCcccCC---Ccce----eecCCCcH
Confidence 999999996422 3468888874 444444 6899999654431 11 100111 1222 23467788
Q ss_pred hcceEEEEEE
Q 008588 527 EGLLTTRWIL 536 (560)
Q Consensus 527 ~~ft~~K~v~ 536 (560)
+.|...-++.
T Consensus 377 ~~FlK~~s~~ 386 (426)
T PRK12447 377 GKFLKTVTYQ 386 (426)
T ss_pred HHhccceeEE
Confidence 8888766554
No 231
>PRK13769 histidinol dehydrogenase; Provisional
Probab=88.64 E-value=36 Score=36.00 Aligned_cols=245 Identities=13% Similarity=0.052 Sum_probs=132.7
Q ss_pred CCeeEEEeecceEEEEEEcCC-ChhhHHHHHHHHHHhCCeEE--eeCCc-chHHHHHHHHHHHHHhcccccCcCcEEeec
Q 008588 237 DGLILEKTSCPLGVLLIVFES-RPDALVQIASLAIRSGNGLL--LKGGK-EAMRSNAILHKVITSAIPDTVGEKLIGLVT 312 (560)
Q Consensus 237 ~~~~~~~~~~PlGVV~~I~p~-~P~~~~~~~~~ALaaGNtvV--lKPse-~tp~t~~~l~~l~~~al~~alP~gvv~vv~ 312 (560)
.|.....++.|+--|++-.|. +|...++.+.||-.+|+.=| .-|.. -.|.+- ..+++ .|+=.+..
T Consensus 83 ~Gv~~g~~~~Pi~rvG~YVPa~~pStvLM~~iPAkvAGV~~Iv~~TPp~~i~p~vL-~aa~~----------~Gv~eIy~ 151 (368)
T PRK13769 83 GGVLRSVFWKPVRRAALYVPARYVSTLVMLAVPARAAGVEEIYVVTPPRGVTGELL-AVAKE----------LGVKGVLA 151 (368)
T ss_pred CCeEEEEEEeeeeeeEEEeccchHHHHHHhhccHhhcCCCeEEEeCCCCCCCHHHH-HHHHH----------cCCCeeec
Confidence 456667789999999999995 56556778889999997644 44442 122221 11122 24444554
Q ss_pred -CCchhhHhhcCCCCccEEEeecCHHH--HHHHHHhcCCCEEEecCccceEEEcCCCCHHHHHHHHHhhcCCCCCccccc
Q 008588 313 -SREEIPDLLKLDDVIDLVIPRGSNKL--VSQIKESTKIPVLGHADGICHVYVDKSANLDVAKNIVIDAKIDYPAACNAM 389 (560)
Q Consensus 313 -~~~~~~~~l~~~~~v~~V~fTGS~~~--G~~i~~~a~~~~~lElGGk~p~iV~~dADld~Aa~~iv~~~f~n~g~C~a~ 389 (560)
||...-+++...-+||+|+=-|..=+ +|+... ...-+=+--|=..-+||.++||.+..+..++.-+=.... .
T Consensus 152 vGGAQAIAa~a~gt~VDkIvGPGN~yV~~AK~~v~-g~V~ID~~AGPSEvlViAD~a~p~~vAaDLLaQAEH~~~----a 226 (368)
T PRK13769 152 IGGPHGLAYAVFHMGVDMVAGPGGLYVQAAKYVLS-QYVGIDGIEGPTELVVYAEGVPPEVAVRGALAQLEHGPT----S 226 (368)
T ss_pred ccCHHHHHHHhcCCCcCEEECCCcHHHHHHHHHHh-CCcCCCCcCCCcceEEEcCCCCHHHHHHHHHHHhhcCCC----C
Confidence 55433234444348999987777533 333211 111111112223446666779999988877765443221 1
Q ss_pred ceEEEeCccCCcchHHHHHHHHHhcCCeEecCccccccccCCCCCcccccccCceEEEEEeCCHHHHHHHHHhcCCCcee
Q 008588 390 ETLLVHKDLACNGALNELVVELQHEGVGLFGGPRASKLLQIPETRLFHHEYNSMVCTVEIVDDVRAAIDHIHQHGSAHTD 469 (560)
Q Consensus 390 ~rv~V~~~i~dd~f~~~l~~~~~~~~~~~~g~~~~~~~~pv~~~~~~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a 469 (560)
.-++|..+ .++.+++.+++++.-. + ..|- ..|+-++|+|||++++|..--= -.
T Consensus 227 ~~iLvT~s---~~la~~V~~~v~~~~~---------------------~-~~~~-~~iivv~~leeai~~~N~~APE-HL 279 (368)
T PRK13769 227 FAYLLSTD---AELLKAAEEIYRRERT---------------------S-SMGP-LEVRKVAGVEEAVRFIDEIAPE-HL 279 (368)
T ss_pred cEEEEECC---HHHHHHHHHHHHHHHH---------------------h-cCCC-CeEEEECCHHHHHHHHHhhChH-he
Confidence 12444443 2565666666554200 0 1221 2467799999999999995322 23
Q ss_pred EEEecCHHHHHHHHhh-cCeeeEEEcCCcCcCCC-----CccCCccceeccccCcccccccchhcceEEEEEE
Q 008588 470 CIVAEDQKVAETFLCQ-VDSAAVFHNASTRFCDG-----ARFGLGAEVGISTSRIHARGPVGVEGLLTTRWIL 536 (560)
Q Consensus 470 ~I~t~d~~~a~~~~~~-l~~G~V~VN~~~~~~~~-----~pfG~g~~sG~~~~~~~~~G~~gl~~ft~~K~v~ 536 (560)
.|.+.+ .+..+ -.+|.|+++.+....+. .-++- +|.. +..|..+...|.+.-++.
T Consensus 280 el~~~~-----~~~~~i~nAGsiFl~~p~a~GDY~aGpNHvLPT---~G~A----R~~sgLsv~~FlK~~t~~ 340 (368)
T PRK13769 280 EVWGRR-----EVAYRVRNVGAVSVNMPSPYLDYVAGISHVLPT---GGTA----RWRGIITPLTFMKPIGVA 340 (368)
T ss_pred EeeCcH-----HHHhhCCccCChhcCCchhhhccccCCCCcCCC---Ccce----eccCCCcHHHcccceeEE
Confidence 444522 23333 46899999654322111 00111 1221 234667888887765554
No 232
>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed
Probab=84.22 E-value=2.5 Score=51.94 Aligned_cols=92 Identities=13% Similarity=0.128 Sum_probs=62.0
Q ss_pred CeeEEEeecceEEEEEEcCCChhhHHHHHHHHHHhCCeEEeeCCcchHHHHHHHHHHHHHhcccccCcCcEEeecCCchh
Q 008588 238 GLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 317 (560)
Q Consensus 238 ~~~~~~~~~PlGVV~~I~p~~P~~~~~~~~~ALaaGNtvVlKPse~tp~t~~~l~~l~~~al~~alP~gvv~vv~~~~~~ 317 (560)
|......-.|.|+|+++.+.-. -....++.+|++||.+|+..++. . .+++.. ||+.|.+.+.-..
T Consensus 1178 GE~N~l~l~pRg~vLcl~~~~~-~~~~Ql~Aala~Gn~~v~~~~~~---~----~~~~~~-----Lp~~v~~~v~~~~-- 1242 (1318)
T PRK11809 1178 GERNTYTLLPRERVLCLADTEQ-DALTQLAAVLAVGSQALWPDDAL---H----RALVAA-----LPAAVQARIQLAK-- 1242 (1318)
T ss_pred CCcceeeccCCCcEEEeCCCHH-HHHHHHHHHHHhCCEEEEeCCch---h----HHHHHh-----ccHHHHhHhhhcc--
Confidence 3445566799999999987533 23456778999999999875543 2 122222 9999988775211
Q ss_pred hHhhcCCCCccEEEeecCHHHHHHHHHh
Q 008588 318 PDLLKLDDVIDLVIPRGSNKLVSQIKES 345 (560)
Q Consensus 318 ~~~l~~~~~v~~V~fTGS~~~G~~i~~~ 345 (560)
...+ ....++.|.|-|.....+.+.++
T Consensus 1243 ~~~~-~~~~~~avl~~G~~~~l~~~~~~ 1269 (1318)
T PRK11809 1243 DWQL-ADQPFDAVLFHGDSDQLRALCEQ 1269 (1318)
T ss_pred cccc-ccCCccEEEEeCCHHHHHHHHHH
Confidence 1222 23469999999999877776554
No 233
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=80.66 E-value=6.6 Score=36.26 Aligned_cols=61 Identities=26% Similarity=0.281 Sum_probs=39.4
Q ss_pred EEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhhhc
Q 008588 38 VLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKVLE 117 (560)
Q Consensus 38 i~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~~~ 117 (560)
++.+||||++|+ ++++-.-.-+++.. + .+..|+ ..+...++|+++-|+.|++...+.+-..
T Consensus 10 Lli~DVDGvLTD------G~ly~~~~Gee~Ka---F-----nv~DG~-----Gik~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 10 LLILDVDGVLTD------GKLYYDENGEEIKA---F-----NVRDGH-----GIKLLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred EEEEeccceeec------CeEEEcCCCceeee---e-----eccCcH-----HHHHHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 345799999997 65554433334432 1 234453 3456678999999999999877765443
No 234
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane. It consists of 11 subunits, ~100 chlorophyll a molecules, 2 phylloquinones, and 3 Fe4S4-clusters. The three dimensional structure of the PSI complex has been resolved at 2.5 A [], which allows the precise localisation of each cofactor. PSI together with photosystem II (PSII) catalyses the light-induced steps in oxygenic photosynthesis - a process found in cyanobacteria, eukaryotic algae (e.g. red algae, green algae) and higher plants. To date, three thylakoid proteins involved in the stable accumulation of PSI have been identified: BtpA [], Ycf3 [, ], and Ycf4 (IPR003359 from INTERPRO) []. Because translation of the psaA and psaB mRNAs encoding the two reaction centre polypeptides, of PSI and PSII respectively, is not affected in mutant strains lacking functional ycf3 and ycf4, the products of these two genes appear to act at a post-translational step of PSI biosynthesis. These gene products are therefore involved either in the stabilisation or in the assembly of the PSI complex. However, their exact roles remain unknown. The BtpA protein appears to act at the level of PSI stabilisation []. It is an extrinsic membrane protein located on the cytoplasmic side of the thylakoid membrane [, ]. Homologs of BtpA are found in the crenarchaeota and euryarchaeota, where their function remains unknown. The Ycf4 protein is firmly associated with the thylakoid membrane, presumably through a transmembrane domain []. Ycf4 co-fractionates with a protein complex larger than PSI upon sucrose density gradient centrifugation of solubilised thylakoids []. The Ycf3 protein is loosely associated with the thylakoid membrane and can be released from the membrane with sodium carbonate. This suggests that Ycf3 is not part of a stable complex and that it probably interacts transiently with its partners []. Ycf3 contains a number of tetratrico peptide repeats (TPR, IPR001440 from INTERPRO); TPR is a structural motif present in a wide range of proteins, which mediates protein-protein interactions.
Probab=74.72 E-value=8.6 Score=38.59 Aligned_cols=59 Identities=24% Similarity=0.365 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHCCCcEEEEeCCCCchhhhh---hcCCceeeEEecCCCccc--chhhHHHHHHHHH
Q 008588 86 AKVNAAYCAACAGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRDAHLWV--KQVGAREMAVAAR 146 (560)
Q Consensus 86 ~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~---~~G~~~GT~~~~~~~~~~--~~~~v~~av~~A~ 146 (560)
.|+..++.... +|++|.+|-+++++.+. .+|-.+||++..+...|. .++-+++-+++++
T Consensus 190 ~~l~~vr~~~~--~PVlvGSGvt~~Ni~~~l~~ADG~IVGS~~K~~G~~~n~VD~~Rv~~fm~~v~ 253 (254)
T PF03437_consen 190 EKLKRVREAVP--VPVLVGSGVTPENIAEYLSYADGAIVGSYFKKDGKWENPVDPERVRRFMEAVK 253 (254)
T ss_pred HHHHHHHhcCC--CCEEEecCCCHHHHHHHHHhCCEEEEeeeeeeCCEeCCcCCHHHHHHHHHHhh
Confidence 45555555544 99999999999999875 467788999887543222 4555555555543
No 235
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=74.64 E-value=17 Score=34.17 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=37.5
Q ss_pred EEeecCCccccCCC--CCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhh
Q 008588 38 VLLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 115 (560)
Q Consensus 38 i~ltdVdGvy~~dP--~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~ 115 (560)
.+..|||||+++.- -++++......+. .. ..+.+++.+.|+++.|++++....+...
T Consensus 9 ~~v~d~dGv~tdg~~~~~~~g~~~~~~~~----------------~D-----~~~~~~L~~~Gi~laIiT~k~~~~~~~~ 67 (169)
T TIGR02726 9 LVILDVDGVMTDGRIVINDEGIESRNFDI----------------KD-----GMGVIVLQLCGIDVAIITSKKSGAVRHR 67 (169)
T ss_pred EEEEeCceeeECCeEEEcCCCcEEEEEec----------------ch-----HHHHHHHHHCCCEEEEEECCCcHHHHHH
Confidence 35679999999742 1333333333322 22 2445667778999999988877766665
Q ss_pred hcC
Q 008588 116 LEG 118 (560)
Q Consensus 116 ~~G 118 (560)
+..
T Consensus 68 l~~ 70 (169)
T TIGR02726 68 AEE 70 (169)
T ss_pred HHH
Confidence 543
No 236
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only]
Probab=70.14 E-value=8.9 Score=37.80 Aligned_cols=68 Identities=24% Similarity=0.349 Sum_probs=45.2
Q ss_pred cccCChHHHHHHHHHHHH-CCCcEEEEeCCCCchhhhh---hcCCceeeEEecCCCccc--chhhHHHHHHHHHH
Q 008588 79 VGRGGMTAKVNAAYCAAC-AGIPVVITSGFAMDSIIKV---LEGKRVGTLFHRDAHLWV--KQVGAREMAVAARE 147 (560)
Q Consensus 79 ~~tggM~~K~~aa~~~~~-~gi~v~I~~g~~~~~i~~~---~~G~~~GT~~~~~~~~~~--~~~~v~~av~~A~~ 147 (560)
..||+ .+.++..+.+.+ ...||++.||-+++++.++ .+|-.+||++......|. ..+-+.+.+++|+.
T Consensus 186 ~~TG~-~~d~~el~~a~~~~~~pvlvGSGv~~eN~~~~l~~adG~IvgT~lK~~G~~~n~VD~~Rv~~~v~~a~~ 259 (263)
T COG0434 186 SRTGS-PPDLEELKLAKEAVDTPVLVGSGVNPENIEELLKIADGVIVGTSLKKGGVTWNPVDLERVRRFVEAARR 259 (263)
T ss_pred ccCCC-CCCHHHHHHHHhccCCCEEEecCCCHHHHHHHHHHcCceEEEEEEccCCEecCccCHHHHHHHHHHHHH
Confidence 34555 344454444444 3599999999999988764 568888999988876665 44445555555543
No 237
>PF13376 OmdA: Bacteriocin-protection, YdeI or OmpD-Associated
Probab=51.32 E-value=23 Score=27.29 Aligned_cols=35 Identities=14% Similarity=0.115 Sum_probs=31.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q 008588 135 QVGAREMAVAARESSRRLQALQSQDRRKILLDVAD 169 (560)
Q Consensus 135 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~ 169 (560)
++|+..+++.-..|..-|..++...|..++..+..
T Consensus 7 P~dl~~aL~~~p~a~~~f~~l~~~~rr~~i~wi~~ 41 (63)
T PF13376_consen 7 PEDLEAALEANPEAKEFFESLTPSYRREYIRWINS 41 (63)
T ss_pred CHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 67999999998999999999999999999977753
No 238
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=46.70 E-value=44 Score=33.41 Aligned_cols=28 Identities=11% Similarity=0.101 Sum_probs=18.5
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchhhhhh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSIIKVL 116 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i~~~~ 116 (560)
++.+.+.+.|+.++|++||.+..+..++
T Consensus 26 ~ai~~l~~~G~~~~iaTGR~~~~~~~~~ 53 (272)
T PRK15126 26 STLARLRERDITLTFATGRHVLEMQHIL 53 (272)
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHH
Confidence 3444556678888888888777655443
No 239
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=44.61 E-value=56 Score=24.66 Aligned_cols=35 Identities=11% Similarity=0.129 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHH
Q 008588 143 VAARESSRRLQALQSQDRRKILLDVADALEANESL 177 (560)
Q Consensus 143 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 177 (560)
+.++..-..|+.+|.++|..+..+.....++..++
T Consensus 30 ~i~~~~~~~W~~ls~~eK~~y~~~a~~~~~~y~~e 64 (66)
T cd01390 30 EVTKILGEKWKELSEEEKKKYEEKAEKDKERYEKE 64 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHh
Confidence 44556667899999999999988887776665554
No 240
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=44.22 E-value=25 Score=35.27 Aligned_cols=27 Identities=15% Similarity=0.149 Sum_probs=18.9
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchhhhh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSIIKV 115 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i~~~ 115 (560)
++.+.+.+.|++++|++||....+..+
T Consensus 31 ~ai~~l~~~Gi~~viaTGR~~~~i~~~ 57 (271)
T PRK03669 31 PWLTRLREAQVPVILCSSKTAAEMLPL 57 (271)
T ss_pred HHHHHHHHcCCeEEEEcCCCHHHHHHH
Confidence 344556667888888888887766544
No 241
>PF09011 HMG_box_2: HMG-box domain; InterPro: IPR015101 This domain is predominantly found in Maelstrom homologue proteins. It has no known function. ; GO: 0005634 nucleus; PDB: 2EQZ_A 1V64_A 2CTO_A 1H5P_A 3TQ6_A 3FGH_A 3TMM_A 1J3X_A 2YRQ_A 1AAB_A ....
Probab=41.22 E-value=80 Score=24.80 Aligned_cols=35 Identities=17% Similarity=0.174 Sum_probs=24.5
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHH
Q 008588 143 VAARESSRRLQALQSQDRRKILLDVADALEANESL 177 (560)
Q Consensus 143 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~e 177 (560)
+..+.+-..|++||.++|..+-.+....=++...+
T Consensus 34 e~~k~~~~~Wk~Ls~~EK~~Y~~~A~~~k~~y~~e 68 (73)
T PF09011_consen 34 EVMKEISERWKSLSEEEKEPYEERAKEDKERYERE 68 (73)
T ss_dssp HHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 45566778899999999999987776554444333
No 242
>PF06945 DUF1289: Protein of unknown function (DUF1289); InterPro: IPR010710 This family consists of a number of hypothetical bacterial proteins. The aligned region spans around 56 residues and contains 4 highly conserved cysteine residues towards the N terminus. The function of this family is unknown.
Probab=41.05 E-value=31 Score=25.49 Aligned_cols=22 Identities=23% Similarity=0.410 Sum_probs=18.7
Q ss_pred HHHhhCCHHHHHHHHHHHHHHH
Q 008588 150 RRLQALQSQDRRKILLDVADAL 171 (560)
Q Consensus 150 ~~w~~~~~~~R~~~L~~~a~~l 171 (560)
..|..++..+|.++|.++...+
T Consensus 28 ~~W~~~s~~er~~i~~~l~~R~ 49 (51)
T PF06945_consen 28 RDWKSMSDDERRAILARLRARR 49 (51)
T ss_pred HHHhhCCHHHHHHHHHHHHHHh
Confidence 3599999999999999887654
No 243
>PF00505 HMG_box: HMG (high mobility group) box; InterPro: IPR000910 High mobility group (HMG or HMGB) proteins are a family of relatively low molecular weight non-histone components in chromatin. HMG1 (also called HMG-T in fish) and HMG2 are two highly related proteins that bind single-stranded DNA preferentially and unwind double-stranded DNA. Although they have no sequence specificity, they have a high affinity for bent or distorted DNA, and bend linear DNA. HMG1 and HMG2 contain two DNA-binding HMG-box domains (A and B) that show structural and functional differences, and have a long acidic C-terminal domain rich in aspartic and glutamic acid residues. The acidic tail modulates the affinity of the tandem HMG boxes in HMG1 and 2 for a variety of DNA targets. HMG1 and 2 appear to play important architectural roles in the assembly of nucleoprotein complexes in a variety of biological processes, for example V(D)J recombination, the initiation of transcription, and DNA repair []. The profile in this entry describing the HMG-domains is much more general than the signature. In addition to the HMG1 and HMG2 proteins, HMG-domains occur in single or multiple copies in the following protein classes; the SOX family of transcription factors; SRY sex determining region Y protein and related proteins []; LEF1 lymphoid enhancer binding factor 1 []; SSRP recombination signal recognition protein; MTF1 mitochondrial transcription factor 1; UBF1/2 nucleolar transcription factors; Abf2 yeast ARS-binding factor []; and Saccharomyces cerevisiae transcription factors Ixr1, Rox1, Nhp6a, Nhp6b and Spp41.; GO: 0003677 DNA binding; PDB: 1I11_A 1J3C_A 1J3D_A 1WZ6_A 1WGF_A 2D7L_A 1GT0_D 3U2B_C 2CRJ_A 2CS1_A ....
Probab=38.70 E-value=73 Score=24.29 Aligned_cols=36 Identities=8% Similarity=0.114 Sum_probs=27.6
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHHH
Q 008588 144 AARESSRRLQALQSQDRRKILLDVADALEANESLIK 179 (560)
Q Consensus 144 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el~ 179 (560)
..+.+-..|+.+|.++|..+........+++..++.
T Consensus 31 i~~~~~~~W~~l~~~eK~~y~~~a~~~~~~y~~~~~ 66 (69)
T PF00505_consen 31 ISKILAQMWKNLSEEEKAPYKEEAEEEKERYEKEMP 66 (69)
T ss_dssp HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566789999999999998888777776665543
No 244
>PRK10976 putative hydrolase; Provisional
Probab=37.66 E-value=36 Score=33.86 Aligned_cols=28 Identities=14% Similarity=0.145 Sum_probs=20.6
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchhhhhh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSIIKVL 116 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i~~~~ 116 (560)
++.+.+.+.|+++.|++||.+..+..++
T Consensus 26 ~ai~~l~~~G~~~~iaTGR~~~~~~~~~ 53 (266)
T PRK10976 26 ETLKLLTARGIHFVFATGRHHVDVGQIR 53 (266)
T ss_pred HHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 3445666789999999999887765543
No 245
>PTZ00174 phosphomannomutase; Provisional
Probab=37.53 E-value=34 Score=33.93 Aligned_cols=27 Identities=15% Similarity=0.139 Sum_probs=19.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCchhhhhh
Q 008588 90 AAYCAACAGIPVVITSGFAMDSIIKVL 116 (560)
Q Consensus 90 aa~~~~~~gi~v~I~~g~~~~~i~~~~ 116 (560)
+...+.+.|+.++|++||.+..+...+
T Consensus 30 ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 30 TLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 344566678998899998887776654
No 246
>smart00398 HMG high mobility group.
Probab=35.92 E-value=1e+02 Score=23.30 Aligned_cols=35 Identities=11% Similarity=0.141 Sum_probs=26.6
Q ss_pred HHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHHHH
Q 008588 144 AARESSRRLQALQSQDRRKILLDVADALEANESLI 178 (560)
Q Consensus 144 ~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~el 178 (560)
..+..-..|+.+|.++|..+........+++..++
T Consensus 32 i~~~~~~~W~~l~~~ek~~y~~~a~~~~~~y~~~~ 66 (70)
T smart00398 32 ISKKLGERWKLLSEEEKAPYEEKAKKDKERYEEEM 66 (70)
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455678999999999999888877766665554
No 247
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=34.72 E-value=2e+02 Score=26.03 Aligned_cols=59 Identities=22% Similarity=0.307 Sum_probs=35.9
Q ss_pred EEeecCCccccCCC--CCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhhhh
Q 008588 38 VLLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSIIKV 115 (560)
Q Consensus 38 i~ltdVdGvy~~dP--~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~~~ 115 (560)
++.+|+||.+.+++ ..++.+.+..+...+. .+.+.+.+.|+++.|++++........
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~---------------------~~i~~Lk~~G~~i~IvTn~~~~~~~~~ 61 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG---------------------YGIRCALKSGIEVAIITGRKAKLVEDR 61 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH---------------------HHHHHHHHCCCEEEEEECCCCHHHHHH
Confidence 45779999887654 2344555555422110 144555667999888888776655554
Q ss_pred hc
Q 008588 116 LE 117 (560)
Q Consensus 116 ~~ 117 (560)
+.
T Consensus 62 l~ 63 (154)
T TIGR01670 62 CK 63 (154)
T ss_pred HH
Confidence 43
No 248
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=34.09 E-value=45 Score=32.23 Aligned_cols=26 Identities=27% Similarity=0.282 Sum_probs=17.8
Q ss_pred HHHHHHHCCCcEEEEeCCCCchhhhh
Q 008588 90 AAYCAACAGIPVVITSGFAMDSIIKV 115 (560)
Q Consensus 90 aa~~~~~~gi~v~I~~g~~~~~i~~~ 115 (560)
+...+.+.|++++|++||.+..+..+
T Consensus 28 al~~l~~~G~~~~iaTGR~~~~~~~~ 53 (230)
T PRK01158 28 AIRKAEKLGIPVILATGNVLCFARAA 53 (230)
T ss_pred HHHHHHHCCCEEEEEcCCchHHHHHH
Confidence 33445567888888888887765543
No 249
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=33.64 E-value=47 Score=32.97 Aligned_cols=27 Identities=30% Similarity=0.212 Sum_probs=19.3
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchhhhh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSIIKV 115 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i~~~ 115 (560)
++...+.+.|+.++|++||.+..+...
T Consensus 27 ~ai~~~~~~G~~~~iaTGR~~~~~~~~ 53 (272)
T PRK10530 27 EALARAREAGYKVIIVTGRHHVAIHPF 53 (272)
T ss_pred HHHHHHHHCCCEEEEEcCCChHHHHHH
Confidence 344556677999999999987765543
No 250
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=33.46 E-value=1.7e+02 Score=29.29 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=19.8
Q ss_pred HHHHH-CCCcEEEEeCCCCchhhhhhc
Q 008588 92 YCAAC-AGIPVVITSGFAMDSIIKVLE 117 (560)
Q Consensus 92 ~~~~~-~gi~v~I~~g~~~~~i~~~~~ 117 (560)
+.+.+ .|+.++|++||.+..+..++.
T Consensus 46 ~~L~~~~g~~v~i~SGR~~~~~~~~~~ 72 (266)
T PRK10187 46 QLLATANDGALALISGRSMVELDALAK 72 (266)
T ss_pred HHHHhCCCCcEEEEeCCCHHHHHHhcC
Confidence 33444 689999999999988877654
No 251
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=32.55 E-value=50 Score=32.88 Aligned_cols=27 Identities=26% Similarity=0.384 Sum_probs=19.0
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchhhhh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSIIKV 115 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i~~~ 115 (560)
++...+.+.|++++|++||....+..+
T Consensus 27 ~ai~~l~~~G~~~~iaTGR~~~~~~~~ 53 (270)
T PRK10513 27 QAIAAARAKGVNVVLTTGRPYAGVHRY 53 (270)
T ss_pred HHHHHHHHCCCEEEEecCCChHHHHHH
Confidence 344556667888888888887766544
No 252
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=31.16 E-value=1.2e+02 Score=23.74 Aligned_cols=34 Identities=12% Similarity=0.171 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHH
Q 008588 143 VAARESSRRLQALQSQDRRKILLDVADALEANES 176 (560)
Q Consensus 143 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 176 (560)
+.++..-..|+.+|.++|..+........+++.+
T Consensus 31 eisk~l~~~Wk~ls~~eK~~y~~~a~~~k~~y~~ 64 (72)
T cd01388 31 AISKILGDRWKALSNEEKQPYYEEAKKLKELHMK 64 (72)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 3456666789999999999887776666555544
No 253
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=28.40 E-value=3.1e+02 Score=31.92 Aligned_cols=72 Identities=18% Similarity=0.151 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHcCCCeEEEeecCCccccCCCCCCCCceeeeeehhchHHHHhcCCCCccccCChHHHH-HHHHHHHH-CC
Q 008588 21 NDSLAGLLALELKADLLVLLSDVEGLYSGPPSEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKV-NAAYCAAC-AG 98 (560)
Q Consensus 21 ~D~~aa~~A~~l~Ad~li~ltdVdGvy~~dP~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~-~aa~~~~~-~g 98 (560)
.+.....+...-.+..-++++|.||-....-.+|+...+ + .++ .+...+.+ .|
T Consensus 477 ~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~---~----------------------~~~~~~L~~L~~d~g 531 (726)
T PRK14501 477 PAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVP---D----------------------KELRDLLRRLAADPN 531 (726)
T ss_pred ccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCC---C----------------------HHHHHHHHHHHcCCC
Confidence 334556666667788889999999987642112221111 1 112 22334444 48
Q ss_pred CcEEEEeCCCCchhhhhhc
Q 008588 99 IPVVITSGFAMDSIIKVLE 117 (560)
Q Consensus 99 i~v~I~~g~~~~~i~~~~~ 117 (560)
+.|+|++|+.+..+.+.+.
T Consensus 532 ~~V~ivSGR~~~~l~~~~~ 550 (726)
T PRK14501 532 TDVAIISGRDRDTLERWFG 550 (726)
T ss_pred CeEEEEeCCCHHHHHHHhC
Confidence 9999999999998887664
No 254
>PLN02887 hydrolase family protein
Probab=28.13 E-value=1.4e+02 Score=33.90 Aligned_cols=28 Identities=36% Similarity=0.462 Sum_probs=20.5
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchhhhhh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSIIKVL 116 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i~~~~ 116 (560)
+|.+.+.+.|+.++|++||....+...+
T Consensus 332 eAI~kl~ekGi~~vIATGR~~~~i~~~l 359 (580)
T PLN02887 332 KALKEALSRGVKVVIATGKARPAVIDIL 359 (580)
T ss_pred HHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 4555667789999999999877665443
No 255
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=27.54 E-value=1.8e+02 Score=21.60 Aligned_cols=34 Identities=12% Similarity=0.124 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHcHH
Q 008588 143 VAARESSRRLQALQSQDRRKILLDVADALEANES 176 (560)
Q Consensus 143 ~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 176 (560)
+..+.....|+.++.++|..+..+......++..
T Consensus 30 ~i~~~~~~~W~~l~~~~k~~y~~~a~~~~~~y~~ 63 (66)
T cd00084 30 EISKILGEMWKSLSEEEKKKYEEKAEKDKERYEK 63 (66)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 3445566789999999999998777666555543
No 256
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=25.77 E-value=2.8e+02 Score=28.58 Aligned_cols=12 Identities=33% Similarity=0.598 Sum_probs=9.0
Q ss_pred EEeecCCc-cccC
Q 008588 38 VLLSDVEG-LYSG 49 (560)
Q Consensus 38 i~ltdVdG-vy~~ 49 (560)
++.||.|| +++.
T Consensus 3 LIftDLDGTLLd~ 15 (302)
T PRK12702 3 LVLSSLDGSLLDL 15 (302)
T ss_pred EEEEeCCCCCcCC
Confidence 67899999 5553
No 257
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=22.93 E-value=1.7e+02 Score=27.36 Aligned_cols=61 Identities=21% Similarity=0.376 Sum_probs=34.1
Q ss_pred eEEEeecCCccccCCC--CCCCCceeeeeehhchHHHHhcCCCCccccCChHHHHHHHHHHHHCCCcEEEEeCCCCchhh
Q 008588 36 LLVLLSDVEGLYSGPP--SEPNSKLIHTYIRAKHQAEITFGDKSRVGRGGMTAKVNAAYCAACAGIPVVITSGFAMDSII 113 (560)
Q Consensus 36 ~li~ltdVdGvy~~dP--~~p~a~~i~~i~~~~~~~~~~~~~~~~~~tggM~~K~~aa~~~~~~gi~v~I~~g~~~~~i~ 113 (560)
.=++++|+||..+++- .+++.+.+...+..+ | .+.+.+.+.|+++.|++++....+.
T Consensus 21 ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d----------------~-----~~i~~L~~~Gi~v~I~T~~~~~~v~ 79 (183)
T PRK09484 21 IRLLICDVDGVFSDGLIYMGNNGEELKAFNVRD----------------G-----YGIRCLLTSGIEVAIITGRKSKLVE 79 (183)
T ss_pred ceEEEEcCCeeeecCEEEEcCCCCEEEEEeccc----------------h-----HHHHHHHHCCCEEEEEeCCCcHHHH
Confidence 3367889999998731 122233333332210 1 2333444579998898888766665
Q ss_pred hhhc
Q 008588 114 KVLE 117 (560)
Q Consensus 114 ~~~~ 117 (560)
.++.
T Consensus 80 ~~l~ 83 (183)
T PRK09484 80 DRMT 83 (183)
T ss_pred HHHH
Confidence 5543
No 258
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=20.54 E-value=1.3e+02 Score=27.57 Aligned_cols=24 Identities=4% Similarity=-0.017 Sum_probs=17.8
Q ss_pred HHHHHHHHCCCcEEEEeCCCCchh
Q 008588 89 NAAYCAACAGIPVVITSGFAMDSI 112 (560)
Q Consensus 89 ~aa~~~~~~gi~v~I~~g~~~~~i 112 (560)
++.+.+.+.|.++++++|+-..-.
T Consensus 34 ~a~~~l~~~G~~ivy~TGRp~~~~ 57 (157)
T smart00775 34 KLYRDIQNNGYKILYLTARPIGQA 57 (157)
T ss_pred HHHHHHHHcCCeEEEEcCCcHHHH
Confidence 344555668999999999976644
Done!