BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008589
(560 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2
SV=3
Length = 1231
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 118/195 (60%), Gaps = 14/195 (7%)
Query: 105 LQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLKQHYEKKVLELEQEKKILQ---VHLQ 161
LQE L+ ++ +L KKL+++ +K LK+ E V +L QE ++++ V L
Sbjct: 603 LQE-LEGQIADLKKKLQEQSKLLK---------LKESTEHTVSKLNQEIRMMKNQRVQLM 652
Query: 162 QKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASMAT 221
+++K+++E+FR WK ++KEV+QLK+ R+ +YE+ KL Q+Q VL+RKTEEA+ A
Sbjct: 653 RQMKEDAEKFRQWKQQKDKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEEAAAAN 712
Query: 222 KRLKELLESRKASSRETSGSDSNIIFYEKALMQ-AIEHELEVTVRVHEVRSEYERQMEER 280
KRLK+ L+ +K + + + S + A M+ + +E+EV V E + +EER
Sbjct: 713 KRLKDALQKQKEVAEKRKETQSRGMESTAARMKNWLGNEIEVMVSTEEAKRHLNGLLEER 772
Query: 281 ARMANEVARLKEESE 295
+A +VA+LKE+ E
Sbjct: 773 KILAQDVAQLKEKRE 787
Score = 38.9 bits (89), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 16/35 (45%)
Query: 349 CSKSSLCKTNKCQCRAAGGACKASCGCSSTKCSNR 383
CS C +C CR C SC C TKC NR
Sbjct: 1086 CSCKGWCGNKQCGCRKQKSDCNVSCSCDPTKCRNR 1120
>sp|O95239|KIF4A_HUMAN Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1
SV=3
Length = 1232
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 129/222 (58%), Gaps = 24/222 (10%)
Query: 87 EDISDEIEDEEKELEHSSLQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLK--QHYEK 144
E++ E++ +K+ + L E+ + L+EL+ ++ A++K+ + +LK + E+
Sbjct: 576 EELVLELQTAKKDANQAKLSERRRKRLQELEGQI----ADLKKKLNEQSKLLKLKESTER 631
Query: 145 KVLELEQEKKILQ---VHLQQKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLA 201
V +L QE ++++ V L +++K+++E+FR WK ++KEV+QLK+ R+ +YE+ KL
Sbjct: 632 TVSKLNQEIRMMKNQRVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELLKLER 691
Query: 202 LNQRQKMVLQRKTEEASMATKRLKELLESRK--------ASSRETSGSDSNIIFYEKALM 253
Q+Q VL+RKTEEA+ A KRLK+ L+ ++ SR G+ + + +
Sbjct: 692 NFQKQSNVLRRKTEEAAAANKRLKDALQKQREVADKRKETQSRGMEGTAARVKNW----- 746
Query: 254 QAIEHELEVTVRVHEVRSEYERQMEERARMANEVARLKEESE 295
+ +E+EV V E + +E+R +A +VA+LKE+ E
Sbjct: 747 --LGNEIEVMVSTEEAKRHLNDLLEDRKILAQDVAQLKEKKE 786
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 16/36 (44%)
Query: 349 CSKSSLCKTNKCQCRAAGGACKASCGCSSTKCSNRE 384
CS C +C CR C C C TKC NR+
Sbjct: 1086 CSCKGWCGNKQCGCRKQKSDCGVDCCCDPTKCRNRQ 1121
>sp|Q90640|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2
SV=1
Length = 1225
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 114/195 (58%), Gaps = 14/195 (7%)
Query: 105 LQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLKQHYEKKVLELEQEKKILQ---VHLQ 161
LQE L+ ++ EL KKL ++ +K LK+ E+ V +L QE + ++ V L
Sbjct: 608 LQE-LEGQINELKKKLNEQAKLLK---------LKESTERTVSKLNQEIREMKNQRVQLM 657
Query: 162 QKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASMAT 221
+++K+++E+FR WK ++KEV+QLK+ R+ +YE+ KL Q+Q VL+RKTEEA+ A
Sbjct: 658 RQMKEDAEKFRQWKQQKDKEVIQLKERDRKRQYELLKLERDFQKQASVLRRKTEEAAAAN 717
Query: 222 KRLKELLE-SRKASSRETSGSDSNIIFYEKALMQAIEHELEVTVRVHEVRSEYERQMEER 280
KRLK+ L+ R+A+ + + + + + +E+EV V E R +E+R
Sbjct: 718 KRLKDALQKQREAADKRKESQNRGMEGVAARVKSWLANEVEVLVSTEEARRHLADLLEDR 777
Query: 281 ARMANEVARLKEESE 295
+A E+ +LKE+ E
Sbjct: 778 KILAQELLQLKEKKE 792
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 334 ITGGKQNAKSGLCCTCSKSSLCKTNKCQCRAAGGACKASCGCSSTKCSNRE 384
+ K KS C C C +C CR C A C C STKC NR+
Sbjct: 1071 VKAAKGTKKSATGCFCK--GRCGNRQCGCRKQKVGCTAGCSCDSTKCRNRD 1119
>sp|Q91784|KIF4_XENLA Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2
SV=1
Length = 1226
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 121/207 (58%), Gaps = 24/207 (11%)
Query: 102 HSSLQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLK--QHYEKKVLELEQE---KKIL 156
+ L E+ + L+EL+ ++ E+K+ G + +LK + EK V ++ QE K+
Sbjct: 594 QAKLSERRRKRLQELEGQM----TELKKKLGEQSKLLKLRESTEKTVAKMNQEIQGMKMQ 649
Query: 157 QVHLQQKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEE 216
+V L +++K+++E+FR WK + KEV+QLK++ R+ +YE+ KL Q+Q VL+RKTEE
Sbjct: 650 RVQLMRQMKEDAEKFRTWKQQKTKEVIQLKEKDRKRQYELLKLERDFQKQANVLRRKTEE 709
Query: 217 ASMATKRLKELLESRK--------ASSRETSGSDSNIIFYEKALMQAIEHELEVTVRVHE 268
A+ A KRLKE L+ +K + S+ G+ S + + + +E+EV V E
Sbjct: 710 AASANKRLKEALQRQKEAMEKRKDSQSKGMEGAASRVKNW-------LANEVEVLVSTEE 762
Query: 269 VRSEYERQMEERARMANEVARLKEESE 295
+ +E+R +A ++A+LK++++
Sbjct: 763 AQRHLNDLLEDRKILAQDIAQLKQKTD 789
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 345 LCCTCSKSSLCKTNKCQCRAAGGACKASCGCSSTKCSNRE 384
L CS + C C CR C C C +KC NR+
Sbjct: 1080 LTSKCSCKARCGNKMCGCRKTKQNCSDDCFCDPSKCRNRD 1119
>sp|Q2VIQ3|KIF4B_HUMAN Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=2
SV=2
Length = 1234
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 115/200 (57%), Gaps = 18/200 (9%)
Query: 102 HSSLQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLKQHYEKKVLELEQEKKILQ---V 158
H LQE L+ ++ +L KKL ++ +K LK+ E+ V +L QE +++ V
Sbjct: 599 HKLLQE-LEGQIADLKKKLNEQSKLLK---------LKESTERTVSKLNQEIWMMKNQRV 648
Query: 159 HLQQKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEAS 218
L +++K+++E+FR WK ++KEV+QLK+ R+ +YE+ KL Q+Q VL+RKTEEA+
Sbjct: 649 QLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELLKLERNFQKQSSVLRRKTEEAA 708
Query: 219 MATKRLKELLESRKASS---RETSGSDSNIIFYEKALMQAIEHELEVTVRVHEVRSEYER 275
A KRLK+ L+ ++ + +ET I + + +E+EV V E +
Sbjct: 709 AANKRLKDALQKQREVTDKRKETQSHGKEGI--AARVRNWLGNEIEVMVSTEEAKRHLND 766
Query: 276 QMEERARMANEVARLKEESE 295
+E+R +A +V +LKE+ E
Sbjct: 767 LLEDRKILAQDVVQLKEKKE 786
Score = 37.4 bits (85), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 17/116 (14%)
Query: 349 CSKSSLCKTNKCQCRAAGGACKASCGCSSTKCSNREAIIIKEDELSKPNMASEQSGQGAD 408
CS C +C CR C C C TKC NR+ K ++ + + Q ++
Sbjct: 1088 CSCKGWCGNKQCGCRKQKSDCGVDCSCDPTKCRNRQQ--------GKDSLGTVEQTQDSE 1139
Query: 409 ETDK--DHALVTHGAMLLQNALIERPADTDEDGGARRKPLSDIGNTLVKSNAPKPN 462
+ K D VT G N + P K + D+ L K AP P+
Sbjct: 1140 GSFKLEDPTEVTPGLSFF-NPVCATP------NSKILKEMCDMEQVLSKKTAPAPS 1188
>sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2
Length = 1672
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 84/143 (58%), Gaps = 14/143 (9%)
Query: 115 ELDKKLEQKEAEMKRFTGA---DTSVLKQH--YEKKVLELEQ---EKKILQVHLQQKIKQ 166
E +KKL E++R A +LK YEK++ +L+Q E K +V L +++K+
Sbjct: 722 EYEKKLHAMNKELQRLQTAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTKVRLMKQMKE 781
Query: 167 ESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASMATKRLKE 226
E E+ R+ ++ R +E+ QLKK+ R+ ++++ L A + Q++VL+RKTEE + ++++
Sbjct: 782 EQEKARLTESRRNREIAQLKKDQRKRDHQLRLLEAQKRNQEVVLRRKTEEVTALRRQVRP 841
Query: 227 LLE------SRKASSRETSGSDS 243
+ + +RK SS E+ D+
Sbjct: 842 MSDKVAGKVTRKLSSSESPAPDT 864
>sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2
Length = 1674
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 88/152 (57%), Gaps = 14/152 (9%)
Query: 106 QEKLDRELKELDKKLEQKEAEMKRFTGA---DTSVLKQH--YEKKVLELEQ---EKKILQ 157
+EK + E +KKL+ E++R A +LK YEK++ +L+Q E K +
Sbjct: 711 EEKAKKVRSEYEKKLQAMNKELQRLQAAQKEHARLLKNQSQYEKQLKKLQQDVMEMKKTK 770
Query: 158 VHLQQKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEA 217
V L +++K+E E+ R+ ++ R +E+ QLKK+ R+ ++++ L A + Q++VL+RKTEE
Sbjct: 771 VRLMKQMKEEQEKARLTESRRNREIAQLKKDQRKRDHQLRLLEAQKRNQEVVLRRKTEEV 830
Query: 218 SMATKRLKELLE------SRKASSRETSGSDS 243
+ ++++ + + +RK SS + D+
Sbjct: 831 TALRRQVRPMSDKVAGKVTRKLSSSDAPAQDT 862
>sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2
Length = 1637
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 82/134 (61%), Gaps = 10/134 (7%)
Query: 105 LQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLKQH--YEKKVLELEQE---KKILQVH 159
++ ++ L+E+++ L++ +A K +LK YE+++ +L+ E K +V
Sbjct: 706 IKADYEKRLREMNRDLQKLQAAQKE----HARLLKNQSRYERELKKLQAEVAEMKKAKVA 761
Query: 160 LQQKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASM 219
L +++++E ++ R+ + R +E+ QLKKE RR E+++ L + ++Q+MVL+RKT+E S
Sbjct: 762 LMKQMREEQQRRRLVETKRNREIAQLKKEQRRQEFQIRALESQKRQQEMVLRRKTQEVS- 820
Query: 220 ATKRLKELLESRKA 233
A +RL + + R A
Sbjct: 821 ALRRLAKPMSERVA 834
>sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2
Length = 1668
Score = 52.4 bits (124), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 82/134 (61%), Gaps = 10/134 (7%)
Query: 105 LQEKLDRELKELDKKLEQKEAEMKRFTGADTSVLKQH--YEKKVLELEQE---KKILQVH 159
++ ++ L+E+++ L++ +A K +LK YE+++ +L+ E K +V
Sbjct: 707 IKADYEKRLREMNRDLQKLQAAQKE----HARLLKNQSRYERELKKLQAEVAEMKKAKVA 762
Query: 160 LQQKIKQESEQFRMWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEASM 219
L +++++E ++ R+ + R +E+ QLKKE RR E+++ L + ++Q++VL+RKT+E S
Sbjct: 763 LMKQMREEQQRRRLVETKRNREIAQLKKEQRRQEFQIRALESQKRQQEIVLRRKTQEVS- 821
Query: 220 ATKRLKELLESRKA 233
A +RL + + R A
Sbjct: 822 ALRRLAKPMSERVA 835
>sp|Q6P9I7|SMC6_XENLA Structural maintenance of chromosomes protein 6 OS=Xenopus laevis
GN=smc6 PE=2 SV=1
Length = 1128
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 201 ALNQRQKMVLQRKTEEASMATKRLKELLESRKASSRETSGSDSNIIFYEKALMQAIEHEL 260
L R +M L+R +A KR++EL +S S + I + M+A+ H+
Sbjct: 404 VLYNRHRMELKRLERDAEQLHKRIEELKKSADNDSESEKMARQKEINQIRERMKAL-HDK 462
Query: 261 EVTV--RVHEVRSEYERQMEERARMANEVARLKEESEQ 296
++T ++H+ + E+ EERAR+ NE +K+ EQ
Sbjct: 463 DITTNQQIHQFQQAIEKYKEERARIGNEERNIKQRLEQ 500
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.307 0.123 0.332
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,961,420
Number of Sequences: 539616
Number of extensions: 8818090
Number of successful extensions: 68575
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 3369
Number of HSP's that attempted gapping in prelim test: 53928
Number of HSP's gapped (non-prelim): 11186
length of query: 560
length of database: 191,569,459
effective HSP length: 123
effective length of query: 437
effective length of database: 125,196,691
effective search space: 54710953967
effective search space used: 54710953967
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 64 (29.3 bits)