Query 008592
Match_columns 560
No_of_seqs 231 out of 1773
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 07:09:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008592.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008592hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 8.4E-95 2.9E-99 787.3 53.8 492 35-560 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 9.4E-92 3.2E-96 756.7 53.4 444 34-543 64-545 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 5.9E-89 2E-93 727.1 46.1 454 37-560 3-488 (499)
4 1zpu_A Iron transport multicop 100.0 6.2E-89 2.1E-93 735.8 45.5 441 36-543 1-482 (534)
5 3t6v_A Laccase; beta barrel, o 100.0 9.8E-89 3.4E-93 725.5 44.1 435 38-542 5-471 (495)
6 1v10_A Laccase; multicopper bl 100.0 6.4E-89 2.2E-93 734.9 43.1 455 34-560 20-508 (521)
7 2q9o_A Laccase-1; multicopper 100.0 1.4E-86 4.8E-91 721.8 44.5 451 33-543 29-522 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 4.7E-86 1.6E-90 710.3 40.4 448 38-560 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 1E-77 3.5E-82 635.9 38.3 387 32-541 11-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 7.5E-78 2.5E-82 637.6 31.0 387 37-545 18-444 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 8.4E-76 2.9E-80 632.1 38.3 400 37-544 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 3.6E-75 1.2E-79 627.2 37.3 413 36-543 24-511 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 3.7E-75 1.3E-79 616.7 32.8 408 32-541 45-480 (481)
14 3gyr_A PHS, phenoxazinone synt 100.0 1.1E-74 3.6E-79 641.2 35.5 445 33-545 28-594 (612)
15 3aw5_A Multicopper oxidase; be 100.0 4.9E-74 1.7E-78 607.3 28.5 369 59-541 28-448 (448)
16 3od3_A Blue copper oxidase CUE 100.0 5.8E-73 2E-77 599.4 28.7 417 36-540 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 3.2E-72 1.1E-76 608.2 32.5 430 34-544 29-593 (612)
18 3g5w_A Multicopper oxidase typ 100.0 1E-55 3.5E-60 446.7 27.9 144 36-181 1-149 (318)
19 3gdc_A Multicopper oxidase; be 100.0 1.7E-53 5.9E-58 425.3 30.1 142 32-181 29-175 (288)
20 2zwn_A Two-domain type laccase 100.0 3.2E-51 1.1E-55 418.3 30.8 211 36-260 2-217 (339)
21 3kw8_A Laccase, putative coppe 100.0 1.6E-51 5.5E-56 408.5 26.3 135 32-176 2-155 (276)
22 3t9w_A Small laccase, multi-co 100.0 1.7E-51 5.7E-56 412.3 23.0 138 30-177 22-178 (299)
23 3tas_A Small laccase, multi-co 100.0 1.2E-50 4.3E-55 409.2 25.6 138 30-178 6-163 (313)
24 2r7e_A Coagulation factor VIII 100.0 1.2E-50 4.2E-55 450.6 18.7 224 41-277 50-312 (742)
25 3cg8_A Laccase; oxidoreductase 100.0 2.2E-48 7.4E-53 396.9 26.7 135 33-178 44-198 (343)
26 2j5w_A Ceruloplasmin, ferroxid 100.0 5.4E-46 1.8E-50 429.8 35.0 253 34-300 18-357 (1065)
27 2j5w_A Ceruloplasmin, ferroxid 100.0 3.3E-45 1.1E-49 423.3 21.1 404 54-545 616-1061(1065)
28 2dv6_A Nitrite reductase; elec 100.0 1.6E-44 5.6E-49 384.1 23.4 390 32-545 23-436 (447)
29 1sdd_B Coagulation factor V; c 100.0 1.3E-43 4.6E-48 392.6 27.1 143 34-178 3-199 (647)
30 1mzy_A Copper-containing nitri 100.0 2.2E-42 7.6E-47 352.9 31.2 219 30-263 25-265 (333)
31 1sdd_A Coagulation factor V; c 100.0 3.4E-44 1.2E-48 361.2 11.1 119 57-178 50-190 (306)
32 2r7e_B Coagulation factor VIII 100.0 4.2E-44 1.5E-48 398.6 9.8 144 33-178 129-321 (770)
33 1kbv_A ANIA, major outer membr 100.0 7.3E-42 2.5E-46 347.4 24.4 243 32-300 33-308 (327)
34 2bw4_A Copper-containing nitri 100.0 1.8E-41 6.1E-46 347.3 27.4 143 32-181 33-186 (340)
35 1oe1_A Dissimilatory copper-co 100.0 1.1E-39 3.7E-44 333.6 30.9 217 32-263 27-265 (336)
36 2zoo_A Probable nitrite reduct 100.0 3.2E-39 1.1E-43 342.5 24.3 247 31-301 22-299 (442)
37 2dv6_A Nitrite reductase; elec 100.0 1.8E-32 6.3E-37 291.2 28.7 210 34-265 160-383 (447)
38 2r7e_A Coagulation factor VIII 100.0 4.6E-31 1.6E-35 293.5 7.2 181 64-256 448-662 (742)
39 1kbv_A ANIA, major outer membr 99.7 1.4E-16 4.8E-21 161.4 19.0 95 436-544 214-309 (327)
40 2zoo_A Probable nitrite reduct 99.6 6.9E-14 2.4E-18 147.8 18.9 94 437-544 205-299 (442)
41 3cvb_A Plastocyanin; cupredoxi 99.6 1.5E-15 5.1E-20 127.3 4.5 90 63-156 14-105 (105)
42 3kw8_A Laccase, putative coppe 99.5 7.7E-14 2.6E-18 137.7 11.9 100 59-160 157-269 (276)
43 1iby_A Nitrosocyanin; RED copp 99.4 1.1E-12 3.6E-17 111.2 11.9 105 38-156 2-112 (112)
44 2cal_A Rusticyanin; iron respi 99.4 1.5E-12 5.2E-17 116.2 9.6 99 52-155 46-154 (154)
45 2uxt_A Protein SUFI, SUFI; oxi 99.3 1E-10 3.6E-15 123.3 19.1 204 37-264 152-387 (451)
46 3cg8_A Laccase; oxidoreductase 99.3 1.4E-11 4.6E-16 125.2 11.7 100 59-160 198-310 (343)
47 1fwx_A Nitrous oxide reductase 99.2 2.1E-11 7E-16 130.4 11.5 96 52-158 497-594 (595)
48 2aan_A Auracyanin A; cupredoxi 99.2 1.1E-10 3.8E-15 102.7 9.7 94 437-541 36-139 (139)
49 3cvb_A Plastocyanin; cupredoxi 99.1 8.9E-11 3E-15 97.9 8.6 85 437-542 20-105 (105)
50 2ov0_A Amicyanin; beta-sandwic 99.1 1.6E-10 5.4E-15 96.4 9.9 79 62-155 27-105 (105)
51 2xu9_A Laccase; oxidoreductase 99.1 1.8E-09 6.2E-14 113.6 20.2 197 37-263 146-389 (439)
52 3gdc_A Multicopper oxidase; be 99.0 1.3E-09 4.4E-14 108.1 10.0 88 436-544 66-156 (288)
53 1hfu_A Laccase 1; oxidoreducta 99.0 2.5E-08 8.5E-13 106.7 20.4 221 39-262 143-414 (503)
54 1v10_A Laccase; multicopper bl 98.9 2.7E-08 9.1E-13 106.8 19.6 201 56-262 191-435 (521)
55 2gim_A Plastocyanin; beta shee 98.9 2.4E-09 8E-14 89.4 8.3 84 67-156 19-106 (106)
56 1sdd_A Coagulation factor V; c 98.9 1.3E-10 4.4E-15 116.3 -1.4 97 56-158 201-302 (306)
57 2gim_A Plastocyanin; beta shee 98.9 5.6E-09 1.9E-13 87.1 8.3 83 437-541 21-105 (106)
58 1sdd_B Coagulation factor V; c 98.8 5.1E-09 1.8E-13 115.6 9.8 101 55-158 225-329 (647)
59 2aan_A Auracyanin A; cupredoxi 98.8 1.7E-08 5.9E-13 88.5 10.1 91 64-155 31-139 (139)
60 3t9w_A Small laccase, multi-co 98.8 2.6E-08 8.8E-13 99.1 12.0 100 59-159 179-290 (299)
61 3tas_A Small laccase, multi-co 98.8 5.1E-08 1.7E-12 97.7 13.4 100 59-159 163-274 (313)
62 3t6v_A Laccase; beta barrel, o 98.7 1.9E-07 6.6E-12 99.2 17.7 205 56-262 168-415 (495)
63 3c75_A Amicyanin; copper prote 98.7 2E-08 6.9E-13 87.1 8.1 78 63-155 55-132 (132)
64 3aw5_A Multicopper oxidase; be 98.7 1E-07 3.5E-12 100.3 14.4 194 38-263 138-381 (448)
65 1qhq_A Protein (auracyanin); e 98.7 3.9E-08 1.3E-12 86.3 9.1 99 437-542 34-140 (140)
66 3od3_A Blue copper oxidase CUE 98.7 4E-07 1.4E-11 96.2 18.3 218 38-265 151-436 (488)
67 3pxl_A Laccase; 4-copper prote 98.7 5.3E-07 1.8E-11 95.8 19.0 205 56-262 166-413 (499)
68 3g5w_A Multicopper oxidase typ 98.7 6.4E-08 2.2E-12 97.1 11.1 121 36-158 135-278 (318)
69 3zx1_A Oxidoreductase, putativ 98.7 2.2E-08 7.7E-13 105.7 8.0 96 58-155 372-480 (481)
70 4hci_A Cupredoxin 1; structura 98.7 7.4E-08 2.5E-12 79.2 8.8 79 62-155 22-100 (100)
71 1oe1_A Dissimilatory copper-co 98.7 5.2E-08 1.8E-12 98.8 9.5 86 436-544 65-154 (336)
72 1zpu_A Iron transport multicop 98.6 1.3E-06 4.5E-11 93.8 20.7 202 56-261 167-409 (534)
73 2plt_A Plastocyanin; electron 98.6 1.2E-07 4E-12 77.7 8.9 80 437-541 19-98 (98)
74 2q9o_A Laccase-1; multicopper 98.6 2.7E-06 9.2E-11 92.0 21.5 85 56-141 195-292 (559)
75 1pcs_A Plastocyanin; electron 98.6 1.9E-07 6.4E-12 76.5 9.5 78 437-541 20-98 (98)
76 2plt_A Plastocyanin; electron 98.6 7.7E-08 2.6E-12 78.8 6.3 80 68-155 18-98 (98)
77 1mzy_A Copper-containing nitri 98.5 1E-07 3.5E-12 96.5 7.9 85 436-543 64-153 (333)
78 1qhq_A Protein (auracyanin); e 98.5 3.8E-07 1.3E-11 79.9 10.4 91 65-156 30-140 (140)
79 1bxv_A Plastocyanin; copper pr 98.5 2.7E-07 9.4E-12 74.3 8.8 72 437-541 20-91 (91)
80 1pcs_A Plastocyanin; electron 98.5 2.7E-07 9.4E-12 75.5 8.2 80 68-155 19-98 (98)
81 2g23_A PHS, phenoxazinone synt 98.5 1.5E-07 5E-12 102.2 8.4 104 56-159 458-594 (612)
82 1iby_A Nitrosocyanin; RED copp 98.5 5E-07 1.7E-11 75.9 9.6 74 437-542 39-112 (112)
83 2zwn_A Two-domain type laccase 98.5 4.6E-07 1.6E-11 91.8 10.3 102 55-158 164-279 (339)
84 1bxv_A Plastocyanin; copper pr 98.5 4E-07 1.4E-11 73.3 7.7 74 67-155 18-91 (91)
85 1b3i_A PETE protein, protein ( 98.4 3.7E-07 1.3E-11 74.5 7.3 78 437-541 20-97 (97)
86 4hci_A Cupredoxin 1; structura 98.4 1.1E-06 3.7E-11 72.2 9.5 72 437-541 29-100 (100)
87 1byp_A Protein (plastocyanin); 98.4 9.9E-07 3.4E-11 72.2 8.9 82 437-541 18-99 (99)
88 1b3i_A PETE protein, protein ( 98.4 8E-07 2.7E-11 72.5 8.2 77 68-155 19-97 (97)
89 1kdj_A Plastocyanin; electron 98.4 8.5E-07 2.9E-11 73.1 7.6 82 68-155 17-102 (102)
90 3erx_A Pseudoazurin; copper pr 98.3 1.3E-06 4.4E-11 74.3 8.6 75 68-157 21-95 (123)
91 3tu6_A Pseudoazurin (blue copp 98.3 1.1E-06 3.7E-11 75.2 7.1 76 68-158 23-98 (127)
92 2bw4_A Copper-containing nitri 98.3 2.6E-06 9E-11 86.3 11.2 98 57-159 216-327 (340)
93 1byp_A Protein (plastocyanin); 98.3 2.4E-06 8.3E-11 69.9 8.9 77 68-155 17-99 (99)
94 1plc_A Plastocyanin; electron 98.3 2.4E-06 8.3E-11 69.9 8.5 77 68-155 17-99 (99)
95 1aoz_A Ascorbate oxidase; oxid 98.2 3.8E-06 1.3E-10 90.8 11.7 86 436-544 34-125 (552)
96 1kdj_A Plastocyanin; electron 98.2 2E-06 6.7E-11 70.9 7.3 84 437-541 18-102 (102)
97 3ef4_A Pseudoazurin, blue copp 98.2 5.1E-06 1.7E-10 70.5 9.2 75 68-157 22-96 (124)
98 2wsd_A Spore coat protein A; o 98.2 3.5E-06 1.2E-10 90.2 9.8 102 56-157 383-511 (513)
99 1plc_A Plastocyanin; electron 98.1 5E-06 1.7E-10 68.0 7.3 82 437-541 18-99 (99)
100 2r7e_B Coagulation factor VIII 98.1 4.6E-07 1.6E-11 101.0 1.3 97 57-156 355-456 (770)
101 1cuo_A Protein (azurin ISO-2); 98.1 8.2E-06 2.8E-10 69.9 8.7 92 65-156 15-129 (129)
102 1id2_A Amicyanin; beta barrel, 98.1 1.5E-05 5.1E-10 66.0 10.1 77 64-155 30-106 (106)
103 3sqr_A Laccase; multicopper ox 98.1 1.3E-05 4.4E-10 86.4 10.9 86 436-544 98-189 (580)
104 1paz_A Pseudoazurin precursor; 98.0 1.4E-05 4.8E-10 68.0 8.6 75 68-157 21-95 (123)
105 3ay2_A Lipid modified azurin p 98.0 9.7E-06 3.3E-10 72.4 7.4 93 64-156 54-167 (167)
106 3abg_A Bilirubin oxidase; clea 98.0 6.8E-06 2.3E-10 88.2 7.6 101 58-158 360-477 (534)
107 1fwx_A Nitrous oxide reductase 98.0 1.8E-05 6.1E-10 84.7 10.7 79 435-543 512-593 (595)
108 2cal_A Rusticyanin; iron respi 98.0 3.3E-05 1.1E-09 68.4 10.4 89 436-541 61-154 (154)
109 1iuz_A Plastocyanin; electron 98.0 3.4E-05 1.2E-09 62.8 9.4 78 67-155 17-98 (98)
110 1pmy_A Pseudoazurin; electron 98.0 1.7E-05 5.7E-10 67.5 7.7 75 68-157 21-95 (123)
111 3sbq_A Nitrous-oxide reductase 98.0 4.2E-05 1.4E-09 80.2 12.0 89 55-157 545-638 (638)
112 2ov0_A Amicyanin; beta-sandwic 97.9 4E-05 1.4E-09 63.3 8.5 72 437-541 34-105 (105)
113 2ccw_A Azurin II, AZN-2; elect 97.8 9E-05 3.1E-09 63.4 10.1 92 65-156 15-129 (129)
114 3gyr_A PHS, phenoxazinone synt 97.8 1.7E-05 5.7E-10 87.1 6.6 99 55-159 457-594 (612)
115 2iaa_C Azurin; quinoprotein, t 97.8 0.00011 3.8E-09 62.7 10.2 92 64-156 13-128 (128)
116 2ux6_A Pseudoazurin; type-1 co 97.8 5.6E-05 1.9E-09 64.1 8.2 73 68-157 21-93 (122)
117 1nwp_A Azurin; electron transp 97.8 0.00013 4.5E-09 62.2 10.1 92 64-155 14-128 (128)
118 3ef4_A Pseudoazurin, blue copp 97.5 0.00032 1.1E-08 59.4 8.0 75 437-544 23-97 (124)
119 3tu6_A Pseudoazurin (blue copp 97.5 0.00026 8.9E-09 60.3 7.3 75 437-544 24-98 (127)
120 3erx_A Pseudoazurin; copper pr 97.4 0.00051 1.7E-08 58.2 8.7 73 437-542 22-94 (123)
121 1iuz_A Plastocyanin; electron 97.2 0.0015 5.3E-08 52.8 8.9 80 437-541 19-98 (98)
122 1id2_A Amicyanin; beta barrel, 97.1 0.0022 7.4E-08 52.8 8.7 72 437-541 35-106 (106)
123 3c75_A Amicyanin; copper prote 96.9 0.0032 1.1E-07 54.0 8.7 72 437-541 61-132 (132)
124 3fsa_A Azurin; copper, cupredo 96.9 0.0066 2.3E-07 51.0 10.3 88 65-155 15-125 (125)
125 1paz_A Pseudoazurin precursor; 96.9 0.0044 1.5E-07 52.4 9.0 74 437-543 22-95 (123)
126 1pmy_A Pseudoazurin; electron 96.7 0.0046 1.6E-07 52.3 7.9 38 502-543 58-95 (123)
127 3sbq_A Nitrous-oxide reductase 96.6 0.0079 2.7E-07 63.3 10.4 79 436-542 558-637 (638)
128 2cua_A Protein (CUA); CUA cent 96.3 0.018 6.2E-07 49.4 9.2 74 68-156 60-135 (135)
129 3s8f_B Cytochrome C oxidase su 96.3 0.023 7.8E-07 50.5 9.9 74 68-156 93-168 (168)
130 3ay2_A Lipid modified azurin p 96.2 0.0083 2.8E-07 53.4 6.6 89 438-541 60-166 (167)
131 2cua_A Protein (CUA); CUA cent 96.1 0.025 8.6E-07 48.5 9.2 70 438-541 62-134 (135)
132 2ux6_A Pseudoazurin; type-1 co 96.0 0.019 6.6E-07 48.3 7.8 72 437-543 22-93 (122)
133 1cuo_A Protein (azurin ISO-2); 95.8 0.018 6.2E-07 48.9 6.7 95 437-541 19-128 (129)
134 2ccw_A Azurin II, AZN-2; elect 95.0 0.066 2.2E-06 45.4 7.7 43 498-541 83-128 (129)
135 2iaa_C Azurin; quinoprotein, t 94.9 0.086 3E-06 44.6 8.0 44 497-541 81-127 (128)
136 3s8f_B Cytochrome C oxidase su 94.5 0.19 6.4E-06 44.6 9.4 72 438-541 95-167 (168)
137 1nwp_A Azurin; electron transp 94.2 0.18 6.1E-06 42.6 8.5 94 437-541 19-128 (128)
138 3fsa_A Azurin; copper, cupredo 93.0 0.4 1.4E-05 40.1 8.3 96 437-541 19-125 (125)
139 3isy_A Bsupi, intracellular pr 61.4 66 0.0023 26.3 11.5 80 55-145 21-105 (120)
140 1cyx_A CYOA; electron transpor 61.1 23 0.00078 32.1 7.4 73 68-155 41-115 (205)
141 1cyx_A CYOA; electron transpor 60.2 27 0.00093 31.6 7.7 73 437-541 42-115 (205)
142 3hb3_B Cytochrome C oxidase su 59.6 19 0.00065 34.7 7.1 75 437-543 190-265 (298)
143 2f1e_A Protein APAG; APAG prot 54.8 12 0.00041 31.2 4.1 73 36-126 5-86 (127)
144 2gsm_B Cytochrome C oxidase su 54.1 25 0.00087 33.2 6.8 74 437-542 172-246 (262)
145 1yew_A Particulate methane mon 54.1 27 0.00094 34.2 7.0 17 113-129 319-335 (382)
146 1xvs_A Protein APAG; MCSG APC2 52.5 12 0.00039 31.2 3.6 73 36-126 4-85 (126)
147 1xwv_A DER F II; beta sheets, 51.0 34 0.0012 28.4 6.4 69 59-128 16-92 (129)
148 1nep_A EPV20, BNPC2, epididyma 50.0 29 0.00098 28.9 5.8 70 59-129 18-95 (130)
149 1xq4_A Protein APAG; all beta 47.3 17 0.00058 30.8 3.9 73 36-126 9-90 (139)
150 2gsm_B Cytochrome C oxidase su 45.5 29 0.001 32.8 5.7 75 68-157 171-247 (262)
151 1tza_A APAG protein, SOR45; st 44.0 15 0.00053 30.8 3.1 47 79-126 33-85 (134)
152 3hb3_B Cytochrome C oxidase su 43.2 36 0.0012 32.8 6.0 76 68-158 189-266 (298)
153 2x3c_A Toxic extracellular end 39.2 84 0.0029 30.9 8.2 16 114-129 95-110 (343)
154 3rfr_A PMOB; membrane, oxidore 34.9 69 0.0023 31.8 6.5 133 13-153 229-410 (419)
155 1v54_B Cytochrome C oxidase po 34.4 94 0.0032 28.5 7.2 75 436-542 140-215 (227)
156 1v54_B Cytochrome C oxidase po 30.9 52 0.0018 30.3 4.8 75 68-157 140-216 (227)
157 2xzz_A Protein-glutamine gamma 24.1 88 0.003 24.7 4.4 52 77-134 23-78 (102)
158 1fft_B Ubiquinol oxidase; elec 22.1 93 0.0032 30.1 4.9 72 438-541 153-225 (315)
159 3b9t_A Twin-arginine transloca 21.9 34 0.0012 35.3 1.9 28 55-83 81-109 (484)
160 1jer_A Cucumber stellacyanin; 21.9 1.1E+02 0.0037 25.7 4.8 33 512-544 77-110 (138)
161 2h7w_A Chagasin; beta-strands, 21.8 3.4E+02 0.012 22.4 8.4 21 67-87 32-52 (131)
162 2c34_A ICP, inhibitor of cyste 21.7 3.1E+02 0.011 21.9 7.7 67 67-134 14-88 (116)
163 2cio_B Inhibitor of cysteine p 21.5 3.2E+02 0.011 22.0 7.7 21 67-87 12-32 (121)
164 4ubp_B Protein (urease (chain 20.7 2E+02 0.0068 23.5 5.7 59 69-127 18-88 (126)
165 4ac7_B Urease subunit beta; hy 20.7 2E+02 0.0068 23.5 5.7 59 69-127 18-88 (126)
166 2wtp_A ORF131 protein, CZCE; m 20.6 29 0.001 28.8 0.9 23 222-244 72-94 (131)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=8.4e-95 Score=787.33 Aligned_cols=492 Identities=30% Similarity=0.572 Sum_probs=380.7
Q ss_pred CceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 35 GITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 35 ~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
+++|+|+|+|++..+++||.++.+|+|||++|||+||+++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|+|+||++|+|+|++ +++||||||||...|+ +||+|+|||++++....+++ .|+|++|+|+||++++..+++.....
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~~-~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPFH-YDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSSC-CSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCCC-CCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999998 8999999999998888 89999999999865444442 36899999999999988776644322
Q ss_pred cC-CCCCCCceEEEcCcCCCCCCCC-------------CC-----ceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeE
Q 008592 193 TG-GAPNISDAFTINGLPGPFYNCA-------------AK-----DTFKLKVTPGKTYLLRMINAALNDELFFSIANHTL 253 (560)
Q Consensus 193 ~~-~~~~~~d~~lvNG~~~~~~~~~-------------~~-----~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~ 253 (560)
.. .....+++++|||+.. ++|+ .. ..+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~~--~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRGQ--FDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBCC--SSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCccc--cCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 1123578999999974 3443 21 12389999999999999999999999999999999
Q ss_pred EEEEeCCCccCC---------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCC
Q 008592 254 TIVETDAVYAKS---------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLK 312 (560)
Q Consensus 254 ~via~DG~~v~p---------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~ 312 (560)
+|||+||++++| ++..++|||++..... ..+.....|+|+|.+..... .+....
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~---~~~~~~~~ail~y~~~~~~~-~p~~~~- 311 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRAR---HPNTPPGLTLLNYLPNSVSK-LPTSPP- 311 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESS---CCCSCCEEEEEEETTSCTTS-CCSSCC-
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccC---CCCCccEEEEEEECCCCCCC-CCCCCC-
Confidence 999999999988 1234667777664321 12345678999998864210 001111
Q ss_pred CCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCch
Q 008592 313 PAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNV 392 (560)
Q Consensus 313 p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~ 392 (560)
| .++.+++......+ .++.+..+. +...+...++++.+.+..... + ..+.|++|+++|..|+.
T Consensus 312 p--~~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~-----------~-~~~~w~iNg~s~~~p~~ 374 (552)
T 1aoz_A 312 P--QTPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI-----------N-GYVKWAINDVSLALPPT 374 (552)
T ss_dssp C--CCCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE-----------T-TEEEEEETTEEECCCSS
T ss_pred C--CCCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC-----------C-CeEEEEECCCccCCCCC
Confidence 2 34444443222211 233332221 333455678888777654221 1 24679999999999988
Q ss_pred hhhHHhhccCCCCcccCCCCCCCCc-cccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCc---cCCCceeecCc
Q 008592 393 ALLQAHFFNRSKGVYTTDFPANPPF-KFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIV---AESHPLHLHGF 468 (560)
Q Consensus 393 ~~l~~~~~~~~~g~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~---~~~HP~HlHG~ 468 (560)
++|.+.+.+.+ |.+..+++..++. .|+.+.. ..+...+.++.++.++.|++|||+|+|.+.+. ...||||||||
T Consensus 375 P~L~~~~~~~~-g~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHGh 452 (552)
T 1aoz_A 375 PYLGAMKYNLL-HAFDQNPPPEVFPEDYDIDTP-PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGH 452 (552)
T ss_dssp CHHHHHHTTCT-TSSCCSCCCSCCCTTCCTTSC-CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETTC
T ss_pred CHHHHHhhcCc-cccccCCCccccccccccccc-cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcCC
Confidence 98888777655 6665555543221 2333211 11122345677899999999999999976433 56799999999
Q ss_pred ceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCC
Q 008592 469 NFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQ 548 (560)
Q Consensus 469 ~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~ 548 (560)
+||||+++.|.|++ .+...+|+.+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 453 ~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~----- 526 (552)
T 1aoz_A 453 DFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE----- 526 (552)
T ss_dssp CEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG-----
T ss_pred ceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch-----
Confidence 99999999898887 445678899999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCCCCCCCC
Q 008592 549 KLPPPPSDLPKC 560 (560)
Q Consensus 549 ~~~~~p~~~~~c 560 (560)
+++++|.++|+|
T Consensus 527 ~~~~~P~~~~~C 538 (552)
T 1aoz_A 527 KVGRIPTKALAC 538 (552)
T ss_dssp GCCCCCHHHHSS
T ss_pred hhccCCcchhhh
Confidence 455688889999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=9.4e-92 Score=756.72 Aligned_cols=444 Identities=33% Similarity=0.521 Sum_probs=351.6
Q ss_pred cCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcC
Q 008592 34 EGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
+|++|+|+|++++..+++||.++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 688999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcce-eEEeeeccccChHHHHHHH
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEV-PIIFGEWWKADTETIINEA 190 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 190 (560)
||+|+||++|+|+|++ .|+||||||||...|+ +||+|+|||+++.+.. +|.|. +|+|+||+++...+++...
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~~-----yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATAD-----YDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSSC-----CSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccCC-----CCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999998 7999999999999888 7999999999876532 37777 9999999999998887655
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC---------CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCC
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAA---------KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~---------~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 261 (560)
... .+..+|+++|||+.. ++|+. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.
T Consensus 218 ~~~--~~~~~d~~liNG~~~--~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGTNT--FDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTBCC--CCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCccc--CCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 432 345789999999963 55542 24689999999999999999999999999999999999999999
Q ss_pred ccCC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Q 008592 262 YAKS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFN 321 (560)
Q Consensus 262 ~v~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~ 321 (560)
+++| ++..++|||++.....+..........|+|+|.+.... .|.. +.+.
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~----~P~~------~~~~ 363 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIA----NPTS------VGTT 363 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCC----CCCC------CCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCC----CCCC------CCCC
Confidence 9988 45668999999876554222334467999999875311 1111 1111
Q ss_pred Cchhhh-hhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC-CchhhhHHhh
Q 008592 322 DTNFVM-QFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ-PNVALLQAHF 399 (560)
Q Consensus 322 ~~~~~~-~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~~~l~~~~ 399 (560)
...... .....|.++ .+..+|...+..+.+.++ .+..+.|++|+++|.. ++.|.|...+
T Consensus 364 ~~~~~~~~~~~~L~P~----~~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~L~~~~ 424 (580)
T 3sqr_A 364 PRGTCEDEPVASLVPH----LALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPTTLKIF 424 (580)
T ss_dssp CCCCSCCSCGGGCCBS----SCCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCHHHHHH
T ss_pred ccchhhcccccccccC----CCCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCchhhhh
Confidence 110000 000122222 122333333444433332 1245789999999975 4667666544
Q ss_pred ccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEe----cCCCEEEEEEeeCCcCccCCCceeecCcceEEEEe
Q 008592 400 FNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVL----PFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQ 475 (560)
Q Consensus 400 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~ 475 (560)
.+ . .+|+. ...++.+ +.|++|||+|+|.+. .+..||||||||+||||++
T Consensus 425 ~g----~--~~~~~--------------------~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~~ 477 (580)
T 3sqr_A 425 NN----E--TIFPT--------------------EYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVAQ 477 (580)
T ss_dssp TT----C--CCCCG--------------------GGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEEE
T ss_pred cC----C--ccCCC--------------------CcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEec
Confidence 32 1 12211 1234444 469999999999752 2479999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 476 GFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 476 ~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
|.|.|++..+...+|+.||++||||.|+++||++|||++||||+|+|||||+||++.||+++|.+.+.
T Consensus 478 g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 478 ETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp ESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred CCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 99999987767789999999999999999999999999999999999999999999999999987543
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=5.9e-89 Score=727.07 Aligned_cols=454 Identities=30% Similarity=0.522 Sum_probs=342.3
Q ss_pred eEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc-----CeeEEecCcccCCCcCCCCCCCc
Q 008592 37 TRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY-----NVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
-.+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++..++|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3679999999999999999999999999999999999999999999999984 79999999999999999999999
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC-CCCCCCCCcceeEEeeeccccChHHHHHH
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA-SYPFPQPFEEVPIIFGEWWKADTETIINE 189 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 189 (560)
|||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+. ...++..++|++|+++||+++...+
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 9999999999999999978999999999999888 899999999987542 1123223567899999999986542
Q ss_pred HHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC----
Q 008592 190 AMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS---- 265 (560)
Q Consensus 190 ~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p---- 265 (560)
.+..+..+|+++|||+.. +..|.....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 159 ---~~~~p~~~d~~liNG~~~-~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGKGR-APSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTBCC-CTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCCCc-CCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 233445789999999952 333334467899999999999999999999999999999999999999999988
Q ss_pred ----------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhh
Q 008592 266 ----------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQF 329 (560)
Q Consensus 266 ----------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 329 (560)
+++.++|||++.....+. .+......|+|+|.+.... .+.. + ..+.... . .
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~----~p~~-~--~~~~~~~---~--~ 301 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV-GFDGGINSAILRYDGAPAV----EPTT-N--QTTSVKP---L--N 301 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS----CCCC-C--CCCCSSB---C--C
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEeCCCCCC----CCCC-C--CCCCCcc---c--c
Confidence 345578999887543332 2333345799999876321 1111 1 0000000 0 0
Q ss_pred cccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCccc
Q 008592 330 SKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYT 408 (560)
Q Consensus 330 ~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~ 408 (560)
...|+++.....|. ..+..+++++.+.+++ ++. .|++|+++|..|+.|.|...+.+ ...
T Consensus 302 ~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g----~~~ 361 (499)
T 3pxl_A 302 EVDLHPLVSTPVPGAPSSGGVDKAINMAFNF--------------NGS--NFFINGASFVPPTVPVLLQILSG----AQT 361 (499)
T ss_dssp GGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------CSS--CEEETTBCCCCCSSCHHHHHHTT----CCS
T ss_pred cccccccccccCCCcccCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCchhhhhhcC----Ccc
Confidence 12344433222221 1234466666555432 112 48999999998888776654432 111
Q ss_pred CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCC
Q 008592 409 TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488 (560)
Q Consensus 409 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~ 488 (560)
.. + ......++.++.|++|||+|+|.+....+.||||||||+||||+++ | ...
T Consensus 362 ~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~-g-------~~~ 414 (499)
T 3pxl_A 362 AQ--D-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA-G-------STV 414 (499)
T ss_dssp TT--T-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT-T-------CCC
T ss_pred cc--c-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc-C-------Ccc
Confidence 00 0 1123457899999999999995322346899999999999999864 2 235
Q ss_pred CCCCCCCccceeEeCC---CCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCC-CCCCCCCCCCC
Q 008592 489 FNLVDPAERNTVGVPS---GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQK-LPPPPSDLPKC 560 (560)
Q Consensus 489 ~~~~~p~~rDTv~vpp---~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~-~~~~p~~~~~c 560 (560)
+|+.+|+|||||.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.+ ++ +++ ...|+++...|
T Consensus 415 ~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~-~~-~~~~~~~p~~~~~~C 488 (499)
T 3pxl_A 415 YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT-PD-VKAVNPVPQAWSDLC 488 (499)
T ss_dssp CCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG-GG-HHHHSCCCHHHHTHH
T ss_pred cccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh-hH-hccccCCCHHHHHhh
Confidence 7889999999999997 99999999999999999999999999999999996543 22 333 23344444444
No 4
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-89 Score=735.77 Aligned_cols=441 Identities=27% Similarity=0.442 Sum_probs=339.8
Q ss_pred ceEEEEEEEEEEEeeecC-ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCCCcCc
Q 008592 36 ITRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPAYVTQ 113 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~~~tq 113 (560)
++|+|+|+|++..+++|| .++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+++|+||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999999999999999999
Q ss_pred cccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHHh
Q 008592 114 CPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAMQ 192 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 192 (560)
|+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++++ ++ .+|+|++|+|+||+++...++...+..
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~-p~---~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF-PY---DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC-CS---CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC-CC---CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 99999999999999966999999999999988 89999999999863 22 347899999999999998887665432
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC----
Q 008592 193 T---GGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS---- 265 (560)
Q Consensus 193 ~---~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p---- 265 (560)
. .+....++++||||+.. +.++|++||+|||||||+|..+.+.|+|+||+|+|||+||++++|
T Consensus 157 ~~~~~g~~~~~d~~liNG~~~----------~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTMN----------LTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBSS----------CEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCCc----------eEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 12334689999999963 589999999999999999999999999999999999999999988
Q ss_pred ----------------CC-CCceEEEEeccCCCCC---CcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCC-CCCch
Q 008592 266 ----------------KA-PNANFLIAARPYATGP---ASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPK-FNDTN 324 (560)
Q Consensus 266 ----------------~~-~~~~y~i~~~~~~~~~---~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~-~~~~~ 324 (560)
++ ..++|||++.....+. .........++|+|.+....+ .+... + .++. ..+
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p--~~~~~-~--~~~~~~~~-- 299 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP--TQNYV-D--SIDNFLDD-- 299 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC--CCCCC-S--CSSCSCCG--
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC--CCCcc-c--cccccccc--
Confidence 11 2357887775432211 112234567999998753210 00000 0 1111 111
Q ss_pred hhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCC
Q 008592 325 FVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSK 404 (560)
Q Consensus 325 ~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~ 404 (560)
..++++. +..++..+++++.+.+.+... .++. ..|++|+++|..|+.+.|...+..
T Consensus 300 ------~~l~p~~----~~~~~~~~~~~~~l~~~~~~~----------~~~~-~~~~iNg~s~~~~~~P~L~~~~~~--- 355 (534)
T 1zpu_A 300 ------FYLQPYE----KEAIYGEPDHVITVDVVMDNL----------KNGV-NYAFFNNITYTAPKVPTLMTVLSS--- 355 (534)
T ss_dssp ------GGCCBSS----CCCCCCSCSEEEEEEEEEEEC----------TTSC-EEEEETTBCCCCCSSCHHHHHTTS---
T ss_pred ------ccceeCC----CCCCCCCCCeEEEEEEEeecc----------CCce-eEEEECCCcccCCCCCceeeeccc---
Confidence 1122221 112334567777776654321 1222 358999999999888766554321
Q ss_pred CcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCC------
Q 008592 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFG------ 478 (560)
Q Consensus 405 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g------ 478 (560)
+.+. .. +.. ...++.++.++.|++|+|+|+|.+ .+.||||||||+||||+++.+
T Consensus 356 ~~~~----~~-~~~------------~~~~~~~~~~~~g~~v~ivi~N~~---~~~HP~HLHGh~F~Vl~~~~~~~~~~~ 415 (534)
T 1zpu_A 356 GDQA----NN-SEI------------YGSNTHTFILEKDEIVEIVLNNQD---TGTHPFHLHGHAFQTIQRDRTYDDALG 415 (534)
T ss_dssp GGGT----TC-GGG------------GCSSSCEEEECTTCEEEEEEEECS---SSCEEEEETTCCEEEEEECCCCCGGGT
T ss_pred Cccc----CC-Ccc------------cCCCceEEEeCCCCEEEEEEeCCC---CCCCCeEecCCceEEEeecCCcccccc
Confidence 2211 00 111 122356789999999999999965 479999999999999999864
Q ss_pred ----CCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 479 ----NFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 479 ----~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
.|++.. .. ....+|.|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 416 G~p~~~~~~~-~~-~~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~ 482 (534)
T 1zpu_A 416 EVPHSFDPDN-HP-AFPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDPF 482 (534)
T ss_dssp CCCCCCBTTB-CC-CCCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred CcccccCccc-cc-cccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECcc
Confidence 343321 11 2257899999999999999999999999999999999999999999999988543
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=9.8e-89 Score=725.48 Aligned_cols=435 Identities=29% Similarity=0.523 Sum_probs=334.4
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc-----CeeEEecCcccCCCcCCCCCCCcC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY-----NVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~-----~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
.+|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +|+|||||+++.+++|+||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 679999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCC-CCCCCCCcceeEEeeeccccChHHHHHHH
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQAS-YPFPQPFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
||+|+||++|+|+|++++++||||||||...|+ +||+|+|||+++.+.. .+++..++|++|+++||+++...++
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 999999999999999978999999999999888 8999999999876421 1232235678999999999876532
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC--CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC---
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAA--KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS--- 265 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~--~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p--- 265 (560)
.+..+..+|+++|||+.. +.|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|
T Consensus 161 --~~~~p~~~d~~liNG~g~--~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGLGR--THVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp --CSSSCCCCSEEEETTBCC--BSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred --ccCCCCCCcEEEECCcCc--CCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 233445789999999952 33432 456799999999999999999999999999999999999999999988
Q ss_pred -----------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCC-CCCCchhhh
Q 008592 266 -----------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILP-KFNDTNFVM 327 (560)
Q Consensus 266 -----------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~ 327 (560)
+++.++|||++.....+. .+.+....|+|+|.+.... .+.. + ... .... .
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~-~~~~~~~~ail~Y~~~~~~----~p~~-~--~~~~~~~~---~- 304 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE-GFDGGINSAILRYDGATTA----DPVT-V--ASTVHTKC---L- 304 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTSCSS----CCCC-C--CCSSCSSB---C-
T ss_pred eeEEEcCceEEEEEEECCCCCceEEEEEecccCcc-ccCCCceEEEEEECCCCCC----CCCC-C--CCCCCccc---c-
Confidence 345688999887543332 2333345799999876321 1111 0 000 0000 0
Q ss_pred hhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCc
Q 008592 328 QFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGV 406 (560)
Q Consensus 328 ~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~ 406 (560)
....|+++.....|. ..+..+++++.+.+++ ++. .|++|+++|..|+.|.|...+.+ .
T Consensus 305 -~~~~L~p~~~~~~p~~~~~~~~d~~~~l~~~~--------------~~~--~w~iNg~s~~~~~~P~L~~~~~g----~ 363 (495)
T 3t6v_A 305 -IETDLHPLSRNGVPGNPHQGGADCNLNLSLGF--------------ACG--NFVINGVSFTPPTVPVLLQICSG----A 363 (495)
T ss_dssp -CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHTT----C
T ss_pred -ccccccccccccCCCccCCCCCcEEEEEEEEe--------------cCc--EEEEcCEecCCCCCcchhhhhcC----C
Confidence 012344432221221 1233456666554432 112 58999999998887766654432 1
Q ss_pred ccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCC
Q 008592 407 YTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDP 486 (560)
Q Consensus 407 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~ 486 (560)
.... + ......++.++.|++|||+|+|. ...+.||||||||+|+||+++. .
T Consensus 364 ~~~~--~-----------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~ 414 (495)
T 3t6v_A 364 NTAA--D-----------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------N 414 (495)
T ss_dssp CSST--T-----------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------C
T ss_pred cCcc--c-----------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------C
Confidence 1100 0 11234578999999999999842 2458999999999999998642 2
Q ss_pred CCCCCCCCCccceeEeCC-CCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 487 AKFNLVDPAERNTVGVPS-GGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 487 ~~~~~~~p~~rDTv~vpp-~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
..+|+.+|+|||||.|++ |+|++|||++||||.|+|||||+||++.||+++|.+.+
T Consensus 415 ~~~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 415 STSNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp CCCCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred CCcccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 357889999999999997 89999999999999999999999999999999996543
No 6
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=6.4e-89 Score=734.89 Aligned_cols=455 Identities=28% Similarity=0.465 Sum_probs=340.4
Q ss_pred cCceEEEEEEEEEEEeeecCc-eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCC
Q 008592 34 EGITRHYKFHIKMQNITRLCQ-TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADG 107 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g~-~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DG 107 (560)
.+...+|+|++++..+++||. ++.+|+|||++|||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 356788999999999999999 999999999999999999999999999999999 99999999999999999999
Q ss_pred CCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC-CCCCCCCCcceeEEeeeccccChHH
Q 008592 108 PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA-SYPFPQPFEEVPIIFGEWWKADTET 185 (560)
Q Consensus 108 v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~ 185 (560)
++++|||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ...++..++|++|+|+||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 99999999999999999999778999999999999988 799999999987532 1223223469999999999988776
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCC--CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCA--AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 186 ~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~--~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
+... .+.....+|+++|||+.. +.|. ....+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||+++
T Consensus 180 ~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 180 LFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp ---------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred Hhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 5421 122234689999999974 4564 23457999999999999999999999999999999999999999998
Q ss_pred CC--------------------CCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCc
Q 008592 264 KS--------------------KAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDT 323 (560)
Q Consensus 264 ~p--------------------~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~ 323 (560)
+| ++..++|||++.....+. .+......++|+|.+.... .+.. + .. .....
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~-~~~~~~~~ail~y~~~~~~----~p~~-~--~~-~~~~~ 325 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN-GFTGGINSAIFRYQGAAVA----EPTT-S--QN-SGTAL 325 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC-SCGGGTTEEEEEETTCCSC----CCCC-C--CC-CSCBC
T ss_pred cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc-cCCCCceeEEEEECCCCCC----CCCC-C--CC-ccccc
Confidence 87 234577888876543221 2222234699999876321 1111 1 00 00000
Q ss_pred hhhhhhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccC
Q 008592 324 NFVMQFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNR 402 (560)
Q Consensus 324 ~~~~~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~ 402 (560)
. ...+.++...+.+. ..+...+..+.++++. ++..+.|++|+++|..+..+.|.+.+.+
T Consensus 326 ---~--~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~~~~~P~l~~~~~g- 385 (521)
T 1v10_A 326 ---N--EANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFIPPTVPVLLQILSG- 385 (521)
T ss_dssp ---C--GGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCSSCHHHHHHHT-
T ss_pred ---c--hhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCcccCCCCchhhhhhcC-
Confidence 0 01233322111111 1112334444332211 2223468999999998877766554432
Q ss_pred CCCccc-CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCC
Q 008592 403 SKGVYT-TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFD 481 (560)
Q Consensus 403 ~~g~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~ 481 (560)
... .+ ...+..++.++.|++|||+++| . +.||||||||+||||+++.+.
T Consensus 386 ---~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~~~~~~-- 435 (521)
T 1v10_A 386 ---VTNPND--------------------LLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVRTPGSS-- 435 (521)
T ss_dssp ---CCCGGG--------------------SSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEECTTCS--
T ss_pred ---Cccccc--------------------CCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEecCCCC--
Confidence 110 01 1124567899999999999998 3 799999999999999997542
Q ss_pred CCCCCCCCCCCCCCccceeEe-CCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCC-CCCCC
Q 008592 482 PNKDPAKFNLVDPAERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPP-SDLPK 559 (560)
Q Consensus 482 ~~~~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~ 559 (560)
.+++.+|.|||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+ ++++.++| .+.+.
T Consensus 436 ------~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~ 507 (521)
T 1v10_A 436 ------VYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDDL 507 (521)
T ss_dssp ------CCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHTH
T ss_pred ------ccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhhh
Confidence 467889999999999 899999999999999999999999999999999999986543 33444334 56777
Q ss_pred C
Q 008592 560 C 560 (560)
Q Consensus 560 c 560 (560)
|
T Consensus 508 C 508 (521)
T 1v10_A 508 C 508 (521)
T ss_dssp H
T ss_pred c
Confidence 7
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=1.4e-86 Score=721.82 Aligned_cols=451 Identities=25% Similarity=0.443 Sum_probs=337.9
Q ss_pred ccCceEEEEEEEEEEE--eeecCce-eEEEEECCCCCCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCC
Q 008592 33 HEGITRHYKFHIKMQN--ITRLCQT-KSIVTVNGQFPGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv 108 (560)
..+.+++|+|++++.. +.++|.. +.+|+|||++|||+|++++||+|+|+|+|+| +++|+|||||+++.+.+|+||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 4678999999999998 8899999 9999999999999999999999999999999 6899999999999998999999
Q ss_pred CCcCccccCC-CCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcce-eEEeeeccccChHH
Q 008592 109 AYVTQCPIQT-GQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEV-PIIFGEWWKADTET 185 (560)
Q Consensus 109 ~~~tq~~i~p-G~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~ 185 (560)
|++|||+|+| |++|+|+|++ .++||||||||...|+ +||+|+|||++++... +++|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~-----~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASLP-----YDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSSC-----CSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcCC-----CcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 7899999999998887 8999999999876532 36777 99999999999887
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCC-CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccC
Q 008592 186 IINEAMQTGGAPNISDAFTINGLPGPFYNCA-AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAK 264 (560)
Q Consensus 186 ~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~-~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~ 264 (560)
+..... .+.+..+++++|||+..+ .|. .+..+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~ 258 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVN 258 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEE
T ss_pred Hhhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccC
Confidence 754332 223456899999999753 353 234678999999999999999999999999999999999999999988
Q ss_pred C--------------------CCCCceEEEEecc--CCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 008592 265 S--------------------KAPNANFLIAARP--YATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFND 322 (560)
Q Consensus 265 p--------------------~~~~~~y~i~~~~--~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~ 322 (560)
| ++..++|||++.. ...+ .........++|+|.+.... .|.. + ..+. .+
T Consensus 259 p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~-~~~~~~~~~ail~y~~~~~~----~P~~-~--~~~~-~~ 329 (559)
T 2q9o_A 259 AMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAAC-GGSLNPHPAAIFHYAGAPGG----LPTD-E--GTPP-VD 329 (559)
T ss_dssp EEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTT-CCBSSSCCEEEEEETTSCCS----CCCC-C--CCCC-CC
T ss_pred ceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEecccccc-CCCCCCceeEEEEECCCCCC----CCCC-C--CCcC-CC
Confidence 7 3345788888875 2222 12233456899999876321 1111 0 1110 01
Q ss_pred chhhhhhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCC-chhhhHHhhc
Q 008592 323 TNFVMQFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQP-NVALLQAHFF 400 (560)
Q Consensus 323 ~~~~~~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p-~~~~l~~~~~ 400 (560)
..+... ..+.+......+. ......+..+.+..... .+..+.|++|+++|..+ ..++|...+.
T Consensus 330 ~~~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~iNg~s~~~~~~~P~L~~~~~ 394 (559)
T 2q9o_A 330 HQCLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDLT-------------GTPLFVWKVNGSDINVDWGKPIIDYILT 394 (559)
T ss_dssp CTTCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEECS-------------SSSSCEEEETTBCCCCCTTSCHHHHHHH
T ss_pred cccccc--cccccCCCCCCCCcccccceeEEEEEEeecC-------------CCceEEEEECCEecccCCCCCcHhHhhc
Confidence 000000 1122211100010 01111223333332210 12345799999999765 4566655443
Q ss_pred cCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecC-CCEEEEEEeeCCc-CccCCCceeecCcceEEEEeCC-
Q 008592 401 NRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPF-NASVEVVMQDTSI-IVAESHPLHLHGFNFFVVAQGF- 477 (560)
Q Consensus 401 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ve~~i~N~~~-~~~~~HP~HlHG~~F~Vl~~~~- 477 (560)
+. .+|+ .+..++.++. +++++|+++|... ...+.||||||||+||||+++.
T Consensus 395 g~------~~~~--------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~ 448 (559)
T 2q9o_A 395 GN------TSYP--------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPD 448 (559)
T ss_dssp TC------CCCC--------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCC
T ss_pred CC------ccCC--------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEecccc
Confidence 21 1121 1244566654 5788888888531 0147999999999999999987
Q ss_pred --------CCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 478 --------GNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 478 --------g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
|.|++..+...+++.+|+|||||.|++++|++|||++||||.|+|||||+||++.|||++|.|.+.
T Consensus 449 ~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 449 VPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp CCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred cccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 666543223567899999999999999999999999999999999999999999999999988654
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=4.7e-86 Score=710.28 Aligned_cols=448 Identities=29% Similarity=0.521 Sum_probs=335.9
Q ss_pred EEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-----cCeeEEecCcccCCCcCCCCCCCcC
Q 008592 38 RHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-----YNVTIHWHGVRQLRSGWADGPAYVT 112 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-----~~~~iH~HG~~~~~~~~~DGv~~~t 112 (560)
.+|+|++++..+++||.++.+|+|||++ ||+|++++||+|+|+|+|+|+ ++|+|||||+++.+.+|+||+|++|
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 4799999999999999999999999999 999999999999999999999 9999999999999889999999999
Q ss_pred ccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCC-CCCCCCCCcceeEEeeeccccChHHHHHHH
Q 008592 113 QCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA-SYPFPQPFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
||+|+||++|+|+|++++++||||||||.+.|+ +||+|+|||+++.+. ..+++..++|++|+|+||+++...++..
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~~-- 161 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQG-- 161 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhcC--
Confidence 999999999999999768999999999999988 799999999987532 2223222468999999999988765311
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCC-CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC----
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAA-KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS---- 265 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~-~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p---- 265 (560)
...+|+++|||+.. +.|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||++++|
T Consensus 162 ------~~~~d~~liNG~~~--~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~ 233 (503)
T 1hfu_A 162 ------AAQPDATLINGKGR--YVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVD 233 (503)
T ss_dssp --------CCSEEEETTBCC--BTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred ------CCCCCEEEECcccc--cCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccC
Confidence 13579999999963 56653 345899999999999999999999999999999999999999999887
Q ss_pred ----------------CCCCceEEEEeccCCCCCC---cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhh
Q 008592 266 ----------------KAPNANFLIAARPYATGPA---SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFV 326 (560)
Q Consensus 266 ----------------~~~~~~y~i~~~~~~~~~~---~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 326 (560)
++..++|||++........ .+......++|+|.+.... .+.. + ..+......
T Consensus 234 ~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~----~p~~-~--~~~~~~~l~-- 304 (503)
T 1hfu_A 234 RLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANA----DPTT-S--ANPNPAQLN-- 304 (503)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSS----CCCC-C--CCSSCCBCC--
T ss_pred eEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCC----CCCC-C--CCCccCCCc--
Confidence 2345778888765422111 1222234699999876321 0111 1 111100000
Q ss_pred hhhcccccccccCCCCC-CCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCC
Q 008592 327 MQFSKKIRSLATAKFPA-KVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKG 405 (560)
Q Consensus 327 ~~~~~~l~~~~~~~~p~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g 405 (560)
...+.++.....+. ..+...+..+.+.++. ++. .|++|+++|..+..+.|.+.+.+
T Consensus 305 ---~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~~P~l~~~~~g---- 361 (503)
T 1hfu_A 305 ---EADLHALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPSVPTLLQIMSG---- 361 (503)
T ss_dssp ---GGGCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCSSCHHHHHHTT----
T ss_pred ---cccccccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCCCcchhhhhcC----
Confidence 01233332111111 1112233333222211 122 58999999998877766654422
Q ss_pred ccc-CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCC
Q 008592 406 VYT-TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNK 484 (560)
Q Consensus 406 ~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~ 484 (560)
... .+ ...++.++.++.|++||++++|.. ..+.||||||||+||||+++.+.
T Consensus 362 ~~~~~~--------------------~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~~----- 414 (503)
T 1hfu_A 362 AQSAND--------------------LLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGSS----- 414 (503)
T ss_dssp CCSGGG--------------------SSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTCC-----
T ss_pred Cccccc--------------------CCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCCC-----
Confidence 110 00 123466789999999999998533 25799999999999999997542
Q ss_pred CCCCCCCCCCCccceeEe-CCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCCCCCCCCCCC-CCCCCC
Q 008592 485 DPAKFNLVDPAERNTVGV-PSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKGPKQKLPPPP-SDLPKC 560 (560)
Q Consensus 485 ~~~~~~~~~p~~rDTv~v-pp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~~~~~~~~~p-~~~~~c 560 (560)
.+++.+|.|||||.| ++++|++|||++||||.|+|||||+||++.|||++|.|.+.+ ++++.++| .+.+.|
T Consensus 415 ---~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 415 ---TYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLC 487 (503)
T ss_dssp ---CCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHH
T ss_pred ---ccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhc
Confidence 457889999999999 999999999999999999999999999999999999886543 33444434 456666
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=1e-77 Score=635.87 Aligned_cols=387 Identities=22% Similarity=0.314 Sum_probs=295.8
Q ss_pred hccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 32 KHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
++.+.+++|+|++++..++++|.++.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++.+ |+||++
T Consensus 11 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~-- 86 (439)
T 2xu9_A 11 RSQGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF-- 86 (439)
T ss_dssp ECBTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT--
T ss_pred ccCCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc--
Confidence 4567789999999999999999999999999999999999999999999999999999999999999976 699986
Q ss_pred CccccCCCCeEEEEEEEc-ccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHH
Q 008592 112 TQCPIQTGQSYVYNFTVT-GQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTET 185 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~-~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 185 (560)
+.|+||++|+|+|+++ +++||||||||.++ |. +||+|+|||+++.+....+ ..++|++|+|+||+++....
T Consensus 87 --~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~-~~~~e~~l~l~D~~~~~~~~ 163 (439)
T 2xu9_A 87 --LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAIPEL-REAEEHLLVLKDLALQGGRP 163 (439)
T ss_dssp --CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGSHHH-HTSEEEEEEEEEECEETTEE
T ss_pred --ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccCccC-CCCCcEEEEEEeeeeCCCCc
Confidence 4699999999999985 58999999999865 44 8999999999875421111 24789999999999876310
Q ss_pred H--HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 186 I--INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 186 ~--~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
. .......+ ..++.++|||+.. +.++|++| +|||||||+|..+.+.|+|+||+|+|||+||+++
T Consensus 164 ~~~~~~~~~~g---~~~~~~~iNG~~~----------p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 164 APHTPMDWMNG---KEGDLVLVNGALR----------PTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCCCHHHHHHC---CCCSEEEETTEES----------CEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCCCccccccC---CCCCEEEECCccC----------CcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 0 00000112 2468999999964 58999999 9999999999999999999999999999999997
Q ss_pred -CC-------------------CCCCceEEEEeccCCCCCCc--------------CCCcceEEEEEecCCCCCCCCCCC
Q 008592 264 -KS-------------------KAPNANFLIAARPYATGPAS--------------FDNTTTAGVLEYDQPNGITTKNLP 309 (560)
Q Consensus 264 -~p-------------------~~~~~~y~i~~~~~~~~~~~--------------~~~~~~~ail~y~~~~~~~~~~~~ 309 (560)
+| ...+|+|+|++.....+... .......++++|.+.... .
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~- 304 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP----L- 304 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC----C-
T ss_pred CCceEeceEEECCceeEEEEEEcCCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc----c-
Confidence 55 11256777777543221100 011245678888764211 0
Q ss_pred CCCCCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC
Q 008592 310 LLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ 389 (560)
Q Consensus 310 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~ 389 (560)
.+|... ..+..+ + .+ ..++++.+..+. .+ ..|++|+++|..
T Consensus 305 ------~~p~~l---------~~~~~l-----~--~~-~~~r~~~l~~~~--------------~g--~~~~iNg~~~~~ 345 (439)
T 2xu9_A 305 ------PLPKAL---------SPFPTL-----P--AP-VVTRRLVLTEDM--------------MA--ARFFINGQVFDH 345 (439)
T ss_dssp ------CCCSCC---------CCCCCC-----C--CC-SEEEEEEEEEEG--------------GG--TEEEETTBCCCT
T ss_pred ------cCcccC---------CCcccC-----C--CC-CcceEEEEEeec--------------cC--ceEeECCEECCC
Confidence 111100 001111 0 11 123555555432 01 248899987732
Q ss_pred CchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcc
Q 008592 390 PNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFN 469 (560)
Q Consensus 390 p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~ 469 (560)
+. ..+.++.|++++|+|+|.+ .+.||||||||+
T Consensus 346 ~~--------------------------------------------~~~~~~~g~~~~~~~~N~~---~~~HP~HLHG~~ 378 (439)
T 2xu9_A 346 RR--------------------------------------------VDLKGQAQTVEVWEVENQG---DMDHPFHLHVHP 378 (439)
T ss_dssp TC--------------------------------------------CCEEECTTCEEEEEEEECS---SSCEEEEESSCC
T ss_pred CC--------------------------------------------CceecCCCCEEEEEEEcCC---CCCCCceeCCCc
Confidence 20 0156889999999999965 489999999999
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 470 FFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 470 F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||||+++.+. +.+|.|||||.|+++++++|||++||||.|+|||||+||||.|||++|+|.
T Consensus 379 F~Vl~~~g~~-----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 379 FQVLSVGGRP-----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp BEEEEETTEE-----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEEeeCCCC-----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 9999997543 247999999999999999999999999999999999999999999999883
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=7.5e-78 Score=637.55 Aligned_cols=387 Identities=16% Similarity=0.189 Sum_probs=290.3
Q ss_pred eEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccc
Q 008592 37 TRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 115 (560)
+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||+
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~ 92 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARM 92 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGC
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCc
Confidence 578999999999987 799999999999999999999999999999999999999999999999987 99998 899
Q ss_pred cCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHHH
Q 008592 116 IQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETIIN 188 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 188 (560)
|+||++|+|+|++.+++||||||||.++ |. +||+|+|||+++++...+++. .++|++|+|+||+++...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 9999999999999556999999999955 43 899999999997654333433 4789999999999876544321
Q ss_pred HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE-cCCeEEEEEeCCCcc-CCC
Q 008592 189 EAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI-ANHTLTIVETDAVYA-KSK 266 (560)
Q Consensus 189 ~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~p~ 266 (560)
...+.....+++++|||+.. +.++|++| +|||||||+|..+.+.|+| +||+|+|||+||+++ +|.
T Consensus 173 --~~~~~~~~~~d~~liNG~~~----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~ 239 (451)
T 2uxt_A 173 --NEPGSGGFVGDTLLVNGVQS----------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPV 239 (451)
T ss_dssp --CCCSSSCCCCSEEEETTEES----------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEE
T ss_pred --ccccCCCCcCCEEEECCccc----------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCce
Confidence 11122345689999999975 47999999 9999999999999999999 899999999999987 551
Q ss_pred -------CC------------CceEEEEeccCCCCCC-------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 008592 267 -------AP------------NANFLIAARPYATGPA-------SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKF 320 (560)
Q Consensus 267 -------~~------------~~~y~i~~~~~~~~~~-------~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~ 320 (560)
.+ .++|+|++........ ........++++|...... .+.. . .+|.
T Consensus 240 ~~~~l~l~pgeR~dvlv~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~----~~~~-~--~~p~- 311 (451)
T 2uxt_A 240 SVKQLSLAPGERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLL----PLVT-D--SLPM- 311 (451)
T ss_dssp EESSEEECTTCEEEEEEECTTCCCEEEEC----------------CCCCSCCEEEEEEECSCC----C-------CCCS-
T ss_pred EeceEEECceeEEEEEEEeCCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCC----cCcc-c--cCcc-
Confidence 12 2445555443221100 0111233567777654211 0000 0 1111
Q ss_pred CCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhc
Q 008592 321 NDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFF 400 (560)
Q Consensus 321 ~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~ 400 (560)
.|.++... + .+...+++ +.++ + .|+||+++|..+
T Consensus 312 -----------~L~~~~~~--~--~~~~~~~~--~~l~----------------~---~~~iNg~~f~~~---------- 345 (451)
T 2uxt_A 312 -----------RLLPTEIM--A--GSPIRSRD--ISLG----------------D---DPGINGQLWDVN---------- 345 (451)
T ss_dssp -----------CSSSSCCC--C--CCCSEEEE--EEEC----------------S---SSSBTTBCCCTT----------
T ss_pred -----------ccCCCCCC--C--CCCcceEE--EEEe----------------e---EEEECCEeCCCC----------
Confidence 12111110 1 11112222 2221 1 378888776322
Q ss_pred cCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCC
Q 008592 401 NRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNF 480 (560)
Q Consensus 401 ~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~ 480 (560)
...+.++.|++|+|+|+|. +.||||||||+||||+++..
T Consensus 346 ----------------------------------~~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G~-- 384 (451)
T 2uxt_A 346 ----------------------------------RIDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNGA-- 384 (451)
T ss_dssp ----------------------------------CCCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETTB--
T ss_pred ----------------------------------CCcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCCc--
Confidence 1125778999999999994 58999999999999999622
Q ss_pred CCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCcee----eEEEeechhhhhcccEEEEEEcCCCC
Q 008592 481 DPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGV----WFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 481 ~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~----w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
.+++.+|.|||||.| +++++|+|++||||. |||||||++|||.|||++|+|.+.+.
T Consensus 385 -------~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~~ 444 (451)
T 2uxt_A 385 -------MPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVPR 444 (451)
T ss_dssp -------CCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSCC
T ss_pred -------CCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCcc
Confidence 345678999999999 999999999999988 99999999999999999999987654
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=8.4e-76 Score=632.08 Aligned_cols=400 Identities=19% Similarity=0.299 Sum_probs=291.3
Q ss_pred eEEEEEEEEEEE--eeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 37 TRHYKFHIKMQN--ITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 37 ~~~~~l~~~~~~--~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
+++|+|++++.. +.++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++.+. +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 478999999644 668898999999999999999999999999999999999999999999999864 99974 79
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeecccccc-----ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHH
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-----ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETII 187 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~ 187 (560)
+|+||++|+|+|++.+++||||||||.++++ +||+|+|||+++.+..++++. .++|++|+|+||+++...++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999866689999999998753 799999999998876665554 367899999999887654432
Q ss_pred HHHHhcC-CCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcC-------CeEEEEEeC
Q 008592 188 NEAMQTG-GAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIAN-------HTLTIVETD 259 (560)
Q Consensus 188 ~~~~~~~-~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~g-------h~~~via~D 259 (560)
. ..+ .....+|.++|||+.++ .++|++ ++|||||||+|..+.+.|+|++ |+|+|||+|
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~p----------~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~D 256 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPWP----------FKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIASD 256 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEESC----------BCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEET
T ss_pred c---cCCCCccccCceeccCCccCc----------eEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEEeC
Confidence 1 111 12345799999999764 577887 5899999999999999999987 999999999
Q ss_pred CCc-cCC--------------------CCCCc-eEEEEeccCCC-CCC-cCCCcceEEEEEecCCCCCCCCCCCCCCCCC
Q 008592 260 AVY-AKS--------------------KAPNA-NFLIAARPYAT-GPA-SFDNTTTAGVLEYDQPNGITTKNLPLLKPAA 315 (560)
Q Consensus 260 G~~-v~p--------------------~~~~~-~y~i~~~~~~~-~~~-~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~ 315 (560)
|++ .+| ++..+ +|+|+...... +.. ..+.....++++|......... . +.
T Consensus 257 G~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~----~~- 330 (534)
T 3abg_A 257 SGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQP-D----TS- 330 (534)
T ss_dssp TEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCS-C----CC-
T ss_pred CCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCC-C----CC-
Confidence 985 455 11122 45555432111 100 0111223577777654211000 0 00
Q ss_pred CCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhh
Q 008592 316 ILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALL 395 (560)
Q Consensus 316 ~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l 395 (560)
..| ..+..+.. +. .+...++.+. +.. .+ ..|+||+++|..+..
T Consensus 331 ~~P------------~~L~~~~~---p~-~~~~~~~~~~--~~~--------------~~--~~w~iNG~~f~~~~~--- 373 (534)
T 3abg_A 331 VVP------------ANLRDVPF---PS-PTTNTPRQFR--FGR--------------TG--PTWTINGVAFADVQN--- 373 (534)
T ss_dssp CCC------------CCCCCCSC---CC-CCCCCCEEEE--CSC--------------CC--STTCCCCBTTBCTTS---
T ss_pred CCc------------cccccCCC---CC-CccccceEEE--Eec--------------cC--ceeEECCcccCCCCC---
Confidence 111 11111110 10 1112333332 211 01 247899887743210
Q ss_pred HHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEe
Q 008592 396 QAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQ 475 (560)
Q Consensus 396 ~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~ 475 (560)
|. ...++.|++++|+|+|.+ ..+.||||||||+||||++
T Consensus 374 --------------------p~-------------------l~~v~~G~~~~w~i~N~~--~~~~HP~HLHG~~F~Vl~~ 412 (534)
T 3abg_A 374 --------------------RL-------------------LANVPVGTVERWELINAG--NGWTHPIHIHLVDFKVISR 412 (534)
T ss_dssp --------------------CC-------------------CCEECTTCEEEEEEEECS--SSCCCCEEESSCCEEEEEE
T ss_pred --------------------cc-------------------eeeccCCCEEEEEEEcCC--CCCCcCEEECCeeEEEEEE
Confidence 10 135778999999999964 2469999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEE-ecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 476 GFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 476 ~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
+.|.+.. ...++++ .|||||.|+|+++++|||+ +||||.|+|||||++|+|.|||+.|.|.+.+
T Consensus 413 ~~g~~~~----~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 413 TSGNNAR----TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SSCCSSS----CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCCCCcC----cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 6554321 1345566 9999999999999999998 8999999999999999999999999997765
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=3.6e-75 Score=627.16 Aligned_cols=413 Identities=19% Similarity=0.264 Sum_probs=293.6
Q ss_pred ceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCc----------------------Cee
Q 008592 36 ITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKY----------------------NVT 91 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~----------------------~~~ 91 (560)
...+|+|++++.... +++..+.+|+|||++|||+|++++||+|+|+|+|+|++ +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 446699999987765 45578999999999999999999999999999999975 899
Q ss_pred EEecCcccCCCcCCCCCCC--cCccccCCCCeE---EEEEEEcccCcceeEeeccccc----c-ccceEeEEEeCCCCCC
Q 008592 92 IHWHGVRQLRSGWADGPAY--VTQCPIQTGQSY---VYNFTVTGQRGTLFWHAHISWL----R-ATLYGPIIILPKQQAS 161 (560)
Q Consensus 92 iH~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~---~Y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~ 161 (560)
|||||+++.+. +||+|+ ++||+|+||++| +|+|++.+++||||||||.++. . +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 99999999854 999995 799999999555 9999986689999999999863 3 7999999999987665
Q ss_pred CCCCCCCcceeEEeeeccccChHHHHHHHHh----------cCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEE
Q 008592 162 YPFPQPFEEVPIIFGEWWKADTETIINEAMQ----------TGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTY 231 (560)
Q Consensus 162 ~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~----------~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~ 231 (560)
++++.+++|++|+|+||+++...++...... .......+++++|||+.+ +.++++++ +|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~ 250 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KY 250 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EE
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EE
Confidence 5666678999999999988765443211000 001234679999999975 36889885 89
Q ss_pred EEEEEecCCCCeEEEEEcCC-eEEEEEeCCCcc-CCC-------CCCceEEEEeccCCC-CC-----------CcCCCcc
Q 008592 232 LLRMINAALNDELFFSIANH-TLTIVETDAVYA-KSK-------APNANFLIAARPYAT-GP-----------ASFDNTT 290 (560)
Q Consensus 232 rlRliN~~~~~~~~~~i~gh-~~~via~DG~~v-~p~-------~~~~~y~i~~~~~~~-~~-----------~~~~~~~ 290 (560)
||||||+|..+.+.|+|++| +|+|||+||+++ +|. .+.+||.+.+..... .. ..+....
T Consensus 251 RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~ 330 (513)
T 2wsd_A 251 RFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANSAGCGGDVNPET 330 (513)
T ss_dssp EEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEECCCSSSSCCTTT
T ss_pred EEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEecccccccCCCCC
Confidence 99999999999999999999 999999999998 561 244566665543211 00 0111112
Q ss_pred eEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcc
Q 008592 291 TAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTC 370 (560)
Q Consensus 291 ~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 370 (560)
..++++|........... . .+|. .+..... .+ ..+...++++.++..+..
T Consensus 331 ~~~il~~~~~~~~~~~~~----~--~~p~------------~l~~~~~--~~-~~~~~~~~~~~l~~~~~~--------- 380 (513)
T 2wsd_A 331 DANIMQFRVTKPLAQKDE----S--RKPK------------YLASYPS--VQ-HERIQNIRTLKLAGTQDE--------- 380 (513)
T ss_dssp TTEEEEEECCSCCSSCCC----C--CCCS------------BCSCCGG--GC-CCCEEEEEEEEEEEEECT---------
T ss_pred CcceEEEEeccCcccCcc----C--CCCc------------cccCCCC--cc-cCCCcceEEEEEEeecCC---------
Confidence 346677765421100000 0 1111 0110000 00 001123344444432211
Q ss_pred cCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEE
Q 008592 371 QGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVM 450 (560)
Q Consensus 371 ~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i 450 (560)
.+ ...|.+|+.+|..+. .+.++.|++|+|+|
T Consensus 381 ---~g-~~~~~iNg~~~~~~~---------------------------------------------~~~~~~g~~~~w~l 411 (513)
T 2wsd_A 381 ---YG-RPVLLLNNKRWHDPV---------------------------------------------TETPKVGTTEIWSI 411 (513)
T ss_dssp ---TS-CEEEEETTBCTTSCC---------------------------------------------CBCCBTTCEEEEEE
T ss_pred ---CC-CceEeECCccCCCcc---------------------------------------------cEecCCCCEEEEEE
Confidence 12 235788987763220 13456899999999
Q ss_pred eeCCcCccCCCceeecCcceEEEEeCCC---CCCCC------CCCCCCCCCCCCccceeEeCCCCEEEEEEEe-cCceee
Q 008592 451 QDTSIIVAESHPLHLHGFNFFVVAQGFG---NFDPN------KDPAKFNLVDPAERNTVGVPSGGWVAIRFLA-DNPGVW 520 (560)
Q Consensus 451 ~N~~~~~~~~HP~HlHG~~F~Vl~~~~g---~~~~~------~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-dnpG~w 520 (560)
+|.+ .+.||||||||+||||+++.+ .|++. ..+......++.|||||.|+|+++++|+|++ ||||.|
T Consensus 412 ~N~~---~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w 488 (513)
T 2wsd_A 412 INPT---RGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRY 488 (513)
T ss_dssp EECS---SSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEE
T ss_pred EcCC---CCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCE
Confidence 9965 479999999999999998742 12111 0011122334569999999999999999998 899999
Q ss_pred EEEeechhhhhcccEEEEEEcCC
Q 008592 521 FMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 521 ~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+|||||+||+|.|||+.|+|.+.
T Consensus 489 ~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 489 VWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp EEEESCHHHHTTTCEEEEEEBCC
T ss_pred EEEcCChhhhhcCCceeEEEeCC
Confidence 99999999999999999999753
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=3.7e-75 Score=616.67 Aligned_cols=408 Identities=22% Similarity=0.277 Sum_probs=283.1
Q ss_pred hccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
.+.+.+++|+|++++..++. +|..+.+|+|||++|||+||+++||+|+|+|+|+|+++|+|||||+++++ ++||+|
T Consensus 45 ~~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p- 121 (481)
T 3zx1_A 45 SKEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP- 121 (481)
T ss_dssp CCSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT-
T ss_pred ccCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc-
Confidence 46788999999999999996 68899999999999999999999999999999999999999999999964 599986
Q ss_pred cCccccCCCCeEEEEEEEccc-CcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChH
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQ-RGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE 184 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~-~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~ 184 (560)
||+|+||++|+|+|+++++ +||||||||.++ |. +||+|+|||+++++..+++ ++++ |+|+||+++...
T Consensus 122 --q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g 195 (481)
T 3zx1_A 122 --HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENA 195 (481)
T ss_dssp --TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTS
T ss_pred --cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCC
Confidence 8999999999999998543 899999999854 44 8999999999987655544 3454 999999987654
Q ss_pred HHHH---HHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCC
Q 008592 185 TIIN---EAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 185 ~~~~---~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 261 (560)
++.. .....+ ..++.++|||+.+ +.++|++|+ ||||||+|..+.+.|+|+||+|+|||+||+
T Consensus 196 ~~~~~~~~~~~~g---~~gd~~lvNG~~~----------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg 260 (481)
T 3zx1_A 196 QIPNNNLNDWLNG---REGEFVLINGQFK----------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGG 260 (481)
T ss_dssp CCCCCCHHHHHHC---CCCSEEEETTEES----------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTE
T ss_pred ccccccchhhccC---CcCCEEEECCccC----------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCC
Confidence 3320 000112 3579999999964 489999998 999999999999999999999999999987
Q ss_pred cc-CCC-------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCC--CCCCchhhhhhcc
Q 008592 262 YA-KSK-------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILP--KFNDTNFVMQFSK 331 (560)
Q Consensus 262 ~v-~p~-------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~ 331 (560)
++ +|. .+.+||.+.+... ......++........ ...... +. ..+ .............
T Consensus 261 ~~~~P~~~~~l~l~pgeR~dvlv~~~--------~~~~~~l~~~~~~~~g--~~~~~~-~~-~~~~~~~~~~~~~~~lP~ 328 (481)
T 3zx1_A 261 LIEKTIYKEELFLSPASRVEVLIDAP--------KDGNFKLESAYYDRDK--MMVKEE-PN-TLFLANINLKKENVELPK 328 (481)
T ss_dssp EEEEEEEESSEEECTTCEEEEEEECS--------SCEEEEEEECCCCCCC--SSCCCC-CC-CEEEEEEEEECCCCCCCS
T ss_pred ccCCceEeCeEEECCccEEEEEEEcC--------CCcEEEEEEecccccC--ccccCC-CC-ceeEEEEecCCCCccCCc
Confidence 75 451 2445666665422 1111222211100000 000000 00 000 0000000000000
Q ss_pred cccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCe-------eeeeecceeccCCchhhhHHhhccCCC
Q 008592 332 KIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTK-------LAASVNNVSFVQPNVALLQAHFFNRSK 404 (560)
Q Consensus 332 ~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~in~~~~~~p~~~~l~~~~~~~~~ 404 (560)
.+..+ +........+++.+....... . ... . .+.. ..|+||+..|..
T Consensus 329 ~l~~~-----~~~~~~~~~r~~~l~~~~~~~--~--~~~-~-~~~~~~~~~~~~~~~iNG~~~~~--------------- 382 (481)
T 3zx1_A 329 NLKIF-----KPSEEPKEFKEIIMSEDHMQM--H--GMM-G-KSEGELKIALASMFLINRKSYDL--------------- 382 (481)
T ss_dssp CSCCC-----CCCCCCCEEEEEEEEECCSTT--T--TGG-G-CCHHHHHHHHHTTEEETTBCCCT---------------
T ss_pred cccCC-----CCCCCCCcEEEEEEeccchhc--c--ccc-c-cccccccccccceeEECCEeCCC---------------
Confidence 11111 100011123333333221000 0 000 0 0000 126777765421
Q ss_pred CcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeC-CCCCCCC
Q 008592 405 GVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQG-FGNFDPN 483 (560)
Q Consensus 405 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~-~g~~~~~ 483 (560)
....+.++.|++|+|+|.|.+ .+.|||||||+.|||+++. .|.
T Consensus 383 -----------------------------~~~~~~~~~G~~v~w~l~N~~---~~~Hp~HlHG~~F~vl~~~~~g~---- 426 (481)
T 3zx1_A 383 -----------------------------KRIDLSSKLGVVEDWIVINKS---HMDHPFHIHGTQFELISSKLNGK---- 426 (481)
T ss_dssp -----------------------------TCCCEEEETTCCEEEEEEECS---SSCEEEEETTCCEEEEEEEETTE----
T ss_pred -----------------------------CCceEEeCCCCEEEEEEEcCC---CCceeEEEeccEEEEEEecccCC----
Confidence 112367899999999999964 5899999999999999983 121
Q ss_pred CCCCCCCCCCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 484 KDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 484 ~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.....++.|||||.|+|+++++|+|++||||.|+|||||++|+|.|||+.|+|+
T Consensus 427 ----~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 427 ----VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ----EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ----CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 122345789999999999999999999999999999999999999999999996
No 14
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.1e-74 Score=641.18 Aligned_cols=445 Identities=17% Similarity=0.218 Sum_probs=285.6
Q ss_pred ccCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcC---------------------
Q 008592 33 HEGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN--------------------- 89 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~--------------------- 89 (560)
+....+.|+|++.+.... +++..+.+|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 28 ~~~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~ 107 (612)
T 3gyr_A 28 SDEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPN 107 (612)
T ss_dssp CSCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGG
T ss_pred cCCCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccc
Confidence 344567888888876655 566788999999999999999999999999999999654
Q ss_pred --------------------eeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc
Q 008592 90 --------------------VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR 145 (560)
Q Consensus 90 --------------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~ 145 (560)
|+|||||+++.+. +||++ ||+|.||++|+|+|++.+++||||||||.++ |+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~~--~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~ 182 (612)
T 3gyr_A 108 TEPGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNV 182 (612)
T ss_dssp GSCSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHT
T ss_pred ccccccccccccccccCCCCceEEcCCCccCCc--ccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhh
Confidence 6789999988654 89875 9999999999999998667899999999865 44
Q ss_pred -ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHHH-------------hc---CCCCCCCceEEEcCc
Q 008592 146 -ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEAM-------------QT---GGAPNISDAFTINGL 208 (560)
Q Consensus 146 -~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~-------------~~---~~~~~~~d~~lvNG~ 208 (560)
+||+|+|||+++++..++++.+++|++|+|+||+++...+...... .. ......++.++|||+
T Consensus 183 ~~Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~ 262 (612)
T 3gyr_A 183 MAGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGR 262 (612)
T ss_dssp TTTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTE
T ss_pred hccceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCC
Confidence 7999999999988777777778999999999998865443211000 00 012345789999999
Q ss_pred CCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCC-------eEEEEEeCCCccC-C---C----------C
Q 008592 209 PGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH-------TLTIVETDAVYAK-S---K----------A 267 (560)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v~-p---~----------~ 267 (560)
.+ +.+.++. ++|||||||+|..+.+.|+|++| +|+|||+||++++ | + .
T Consensus 263 ~~----------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~ 331 (612)
T 3gyr_A 263 IW----------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp ES----------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred cc----------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEec
Confidence 75 4677765 58999999999999999999998 5999999999874 2 1 1
Q ss_pred CCceEEEEeccCCCCCC-----------------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhc
Q 008592 268 PNANFLIAARPYATGPA-----------------SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFS 330 (560)
Q Consensus 268 ~~~~y~i~~~~~~~~~~-----------------~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 330 (560)
+.+||.+.+........ .........+++|......... .. .++....
T Consensus 332 pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~p~~~~-------- 396 (612)
T 3gyr_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SF------ALPEVLS-------- 396 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CC------CCCSSCC--------
T ss_pred cceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCC-cc------ccccccc--------
Confidence 34577766653211100 0000111233333221110000 00 0010000
Q ss_pred ccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceec----cCCchhhhHHhhccCCCCc
Q 008592 331 KKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSF----VQPNVALLQAHFFNRSKGV 406 (560)
Q Consensus 331 ~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~----~~p~~~~l~~~~~~~~~g~ 406 (560)
.. ........+ ...+.......... ........+.+..... ..+....
T Consensus 397 ----~~-~~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 448 (612)
T 3gyr_A 397 ----GS-FRRMSHDIP--HGHRLIVLTPPGTK---------GSGGHPEIWEMAEVEDPADVQVPAEGV------------ 448 (612)
T ss_dssp ----SS-CCCCCTTSC--CEEEEEEEECTTCT---------TTTTCCEEEEEEECC-----CCSCTTE------------
T ss_pred ----cc-ccccccccc--cccccccccccccc---------cccccccccccccccccccccccccce------------
Confidence 00 000000000 01111111000000 0000111111111110 0000000
Q ss_pred ccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCC--
Q 008592 407 YTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNK-- 484 (560)
Q Consensus 407 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~-- 484 (560)
.........+..+..++ ........+.++.|++|+|+|+|.+ .+.||||||||+||||+++.+.+....
T Consensus 449 ~~~~~~~~~~~~~~~n~------~~~~~~~~~~~~~g~~~~w~i~N~~---~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~ 519 (612)
T 3gyr_A 449 IQVTGADGRTKTYRRTA------RTFNDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLGRDAYDASGFDLA 519 (612)
T ss_dssp EEEECTTSCEEEEEEEE------CSTTSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCEEEEEEEEEEECTTEETT
T ss_pred eeeccCCCccccccccC------ccCCCCcceEeCCCCEEEEEEEcCC---CCCcCEeECCCcEEEEeecCCcCcccccc
Confidence 00000000001111111 0112234578899999999999975 489999999999999998644332210
Q ss_pred -------------CCCCCCCCCCCccceeEeCCCCEEEEEEE-ecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 485 -------------DPAKFNLVDPAERNTVGVPSGGWVAIRFL-ADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 485 -------------~~~~~~~~~p~~rDTv~vpp~g~v~irf~-adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
.....+..++.|||||.|+++++++|||+ +||||.||||||||+|||.|||+.|+|.+++.
T Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 520 LGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp TTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccccccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 01235667889999999999999999998 69999999999999999999999999987654
No 15
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.9e-74 Score=607.29 Aligned_cols=369 Identities=20% Similarity=0.310 Sum_probs=269.0
Q ss_pred EEECCC-CCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeE
Q 008592 59 VTVNGQ-FPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFW 137 (560)
Q Consensus 59 ~~~ng~-~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wY 137 (560)
|+|||+ +|||+|++++||+|+|+|+|+|+++|+|||||+++++ ++||+|+ |+|+||++|+|+|++++++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 999999 9999999999999999999999999999999999974 5999997 999999999999999658999999
Q ss_pred eecccc----cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHH--HHHhcCCCCCCCceEEEcCcCC
Q 008592 138 HAHISW----LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIIN--EAMQTGGAPNISDAFTINGLPG 210 (560)
Q Consensus 138 H~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~d~~lvNG~~~ 210 (560)
|||.++ |. +||+|+|||+++++. ++++...+|++|+|+||+++. .++.. .... ......+++++|||+..
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~~d~~e~~l~l~D~~~~~-~~~~~~~~~~~-~~~~~~~~~~liNG~~~ 179 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFKYGVNDLPLVISDRRFIG-GAPVYNPTPME-MIAGFLGNAVLVNGVKD 179 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCCBTTTEEEEEEEEEEEET-TEEECCCCHHH-HHHCCCCSEEEETTEET
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCCCCCceEEEEEEeeccCC-Ccccccccccc-cccCccccEEEECCccc
Confidence 999544 54 899999999998765 333322389999999999876 43211 0000 01124579999999974
Q ss_pred CCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE--cC---CeEEEEEeCCCccC-CC-------CC---------
Q 008592 211 PFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI--AN---HTLTIVETDAVYAK-SK-------AP--------- 268 (560)
Q Consensus 211 ~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~v~-p~-------~~--------- 268 (560)
+.++|++| +|||||||+|..+.+.|+| +| |+|+|||+||++++ |. .+
T Consensus 180 ----------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 248 (448)
T 3aw5_A 180 ----------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVE 248 (448)
T ss_dssp ----------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred ----------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEE
Confidence 58999999 9999999999999999999 99 99999999999998 61 11
Q ss_pred --CceEEEEeccCCCCCC----------cCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccc
Q 008592 269 --NANFLIAARPYATGPA----------SFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSL 336 (560)
Q Consensus 269 --~~~y~i~~~~~~~~~~----------~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~ 336 (560)
.+.|||++.....+.+ ........++++|.+.... + . | ..|..+
T Consensus 249 ~~~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~-p------------~~L~~l 304 (448)
T 3aw5_A 249 LGEGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEA---------V--P-V------------EALSDP 304 (448)
T ss_dssp ECSEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCC---------C--C-C------------CCCSCC
T ss_pred CCCCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCC---------C--C-c------------cccCCC
Confidence 2456666554322111 0111234566777543211 0 0 0 001111
Q ss_pred ccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCcccCCCCCCCC
Q 008592 337 ATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYTTDFPANPP 416 (560)
Q Consensus 337 ~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p 416 (560)
.. ...+...++++.+..+ ...|++|+++|..++ |
T Consensus 305 p~----~~~~~~~~~~~~l~~~------------------~~~~~iNg~~~~~~~------------------------p 338 (448)
T 3aw5_A 305 PP----EPPKPTRTRRFALSLS------------------GMQWTINGMFWNASN------------------------P 338 (448)
T ss_dssp CC----CCCCCSEEEEEEEEEE------------------TTEEEETTBCCCTTC------------------------T
T ss_pred CC----CCCCCCceEEEEEeCC------------------CceeeECCCcCCCCC------------------------C
Confidence 00 0112233454444321 124899998874320 1
Q ss_pred ccccCCCCCCCCccccCCcEEEE-ecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCC----CC
Q 008592 417 FKFNYTGTPPSNIMVSSGTKVVV-LPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKF----NL 491 (560)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~----~~ 491 (560)
.+. ++.|++|+|+|+|.+ ..+.||||||||+||||+++ |.+........+ +.
T Consensus 339 --------------------~~~~~~~g~~v~~~i~N~~--~~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p 395 (448)
T 3aw5_A 339 --------------------LFEHVSVEGVELWEIVNDK--ASMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLP 395 (448)
T ss_dssp --------------------TCCCEEECEEEEEEEEECS--SSCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCG
T ss_pred --------------------ceeccCCCCeEEEEEEcCC--CCCCcCEEECCceEEEEEec-CCCcccccccccccCCCc
Confidence 123 678999999999964 14799999999999999985 433211111122 33
Q ss_pred CCCCccceeEeCCCCEEEEE--EE---ecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 492 VDPAERNTVGVPSGGWVAIR--FL---ADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 492 ~~p~~rDTv~vpp~g~v~ir--f~---adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.++.|||||.|+|+++++|+ |+ +||| |+|||||+||||.|||++|+|.
T Consensus 396 ~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 396 TDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred cccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 45689999999999999665 98 8999 9999999999999999999883
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=5.8e-73 Score=599.40 Aligned_cols=417 Identities=18% Similarity=0.237 Sum_probs=281.0
Q ss_pred ceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccc
Q 008592 36 ITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCP 115 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~ 115 (560)
..++|+|++++..++++|..+.+|+|||++|||+|++++||+|+|+|+|+|+++|+|||||+++++. +||+| ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cCc
Confidence 3477999999999999999999999999999999999999999999999999999999999999864 99987 899
Q ss_pred cCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCCCCC--CCcceeEEeeeccccChHHHHH
Q 008592 116 IQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYPFPQ--PFEEVPIIFGEWWKADTETIIN 188 (560)
Q Consensus 116 i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 188 (560)
|.||++|+|+|++.+++||||||||.++ |. +||+|+|||+++++..++++. ..+|++|+|+||+++...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 9999999999998556899999999865 33 799999999998765444443 3468999999999875543210
Q ss_pred HH-HhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEE-cCCeEEEEEeCCCcc-CC
Q 008592 189 EA-MQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSI-ANHTLTIVETDAVYA-KS 265 (560)
Q Consensus 189 ~~-~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~v-~p 265 (560)
.. .........+|.++|||+.+| .+.+ +|++|||||||+|..+.+.|+| +||+|+|||+||+++ +|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~p----------~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P 239 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIYP----------QHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSSC----------EEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcCc----------cEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCc
Confidence 00 000001235799999999754 4455 5789999999999999999999 699999999999986 56
Q ss_pred C-------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCC-CCCC--CCCchh--hhhhcccc
Q 008592 266 K-------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAA-ILPK--FNDTNF--VMQFSKKI 333 (560)
Q Consensus 266 ~-------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~-~~~~--~~~~~~--~~~~~~~l 333 (560)
. .+.+||.+.+.... .....++........ .... +.. ..+. ...... .......|
T Consensus 240 ~~~~~l~l~pGeR~dvlv~~~~--------~~~~~l~~~~~~~~g----~~~~-~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 240 VKVSELPVLMGERFEVLVEVND--------NKPFDLVTLPVSQMG----MAIA-PFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EEESCEEECTTCEEEEEEEECT--------TCCEEEEECCCSSTT----TTST-TTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred cEeceEEECCCCEEEEEEEeCC--------CceEEEEEeccCCCC----cccc-cccCccceeEecccccCCCCCCCccc
Confidence 2 24467777665321 111122211111000 0000 000 0000 000000 00000001
Q ss_pred cccccCCCCCCCCCCcceeEEEEeccC----------------CcCCC---------CCCccc-CCCCCee----eeeec
Q 008592 334 RSLATAKFPAKVPMKVDRRFFFTVGLG----------------LSPCP---------QNQTCQ-GPNNTKL----AASVN 383 (560)
Q Consensus 334 ~~~~~~~~p~~~p~~~~~~~~~~~~~~----------------~~~~~---------~~~~~~-~~~~~~~----~~~in 383 (560)
..+. ..+ .++....+++.+.+... ..... .+..+. ...|..+ .|+||
T Consensus 307 ~~~~--~~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~IN 383 (488)
T 3od3_A 307 SSLP--ALP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKIN 383 (488)
T ss_dssp CCCC--CCC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEET
T ss_pred ccCC--CCc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeEC
Confidence 1100 000 01112345555543200 00000 000000 0001111 25777
Q ss_pred ceeccCCchhhhHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCce
Q 008592 384 NVSFVQPNVALLQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPL 463 (560)
Q Consensus 384 ~~~~~~p~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~ 463 (560)
+++|... ...+.++.|++|+|.|.|.+. .+.|||
T Consensus 384 G~~~~~~--------------------------------------------~~~~~~~~G~~e~w~l~N~~~--~~~Hp~ 417 (488)
T 3od3_A 384 GQAFDMN--------------------------------------------KPMFAAAKGQYERWVISGVGD--MMLHPF 417 (488)
T ss_dssp TBCCCTT--------------------------------------------CCSEECCBSSCEEEEEECTTC--CCCEEE
T ss_pred CeeCCCC--------------------------------------------CCceEcCCCCEEEEEEEeCCC--CCCccE
Confidence 7665211 112678899999999999752 479999
Q ss_pred eecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe----cCceeeEEEeechhhhhcccEEEEE
Q 008592 464 HLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA----DNPGVWFMHCHLEVHTSWGLKMAWI 539 (560)
Q Consensus 464 HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a----dnpG~w~~HCHil~H~d~GMm~~~~ 539 (560)
||||++|+|++++.. .....++.|||||.|+ |+++.|+|++ ++||.|||||||++|||.|||..|+
T Consensus 418 HlHg~~F~Vl~~~g~---------~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed~GMm~~f~ 487 (488)
T 3od3_A 418 HIHGTQFRILSENGK---------PPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDTGMMLGFT 487 (488)
T ss_dssp EETTCCBEEEEBTTB---------CCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHHTTCEEEEE
T ss_pred EEcCceEEEeccCCC---------ccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHhcCCcEEEE
Confidence 999999999998532 1223456899999999 9999999997 4578999999999999999999998
Q ss_pred E
Q 008592 540 V 540 (560)
Q Consensus 540 V 540 (560)
|
T Consensus 488 V 488 (488)
T 3od3_A 488 V 488 (488)
T ss_dssp C
T ss_pred C
Confidence 6
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=3.2e-72 Score=608.19 Aligned_cols=430 Identities=19% Similarity=0.239 Sum_probs=286.7
Q ss_pred cCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcC----------------------
Q 008592 34 EGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYN---------------------- 89 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~---------------------- 89 (560)
....++|+|++++.... +++..+.+|+|||++|||+|++++||+|+|+++|+|++.
T Consensus 29 ~~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~ 108 (612)
T 2g23_A 29 DEVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNT 108 (612)
T ss_dssp SCTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGG
T ss_pred CCCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCccccc
Confidence 34568899999998766 445689999999999999999999999999999999853
Q ss_pred -------------------eeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-
Q 008592 90 -------------------VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR- 145 (560)
Q Consensus 90 -------------------~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~- 145 (560)
|++||||+++.+. +||++ ||+|.||++|+|+|++.+++||||||||.++ |.
T Consensus 109 ~p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~ 183 (612)
T 2g23_A 109 EPGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVM 183 (612)
T ss_dssp SCSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTT
T ss_pred ccccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhh
Confidence 8999999999876 99985 8999999999999998668999999999986 44
Q ss_pred ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHH-HH-HH------Hh----cCC----CCCCCceEEEcCcC
Q 008592 146 ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI-IN-EA------MQ----TGG----APNISDAFTINGLP 209 (560)
Q Consensus 146 ~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~-~~------~~----~~~----~~~~~d~~lvNG~~ 209 (560)
+||+|+|||+++++..++++.+++|++|+|+||+++...+. +. .. .. .++ .+..+|.+||||+.
T Consensus 184 ~GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~ 263 (612)
T 2g23_A 184 AGLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI 263 (612)
T ss_dssp TTCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE
T ss_pred ccceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCcc
Confidence 89999999999876666667789999999999999754210 00 00 00 011 12467999999997
Q ss_pred CCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCC-------eEEEEEeCCCccC-C---C------C----C
Q 008592 210 GPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH-------TLTIVETDAVYAK-S---K------A----P 268 (560)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~v~-p---~------~----~ 268 (560)
+ +.++|++| +|||||||+|..+.+.|+|++| +|+|||+||++++ | + . +
T Consensus 264 ~----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~p 332 (612)
T 2g23_A 264 W----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAP 332 (612)
T ss_dssp S----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECT
T ss_pred C----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECC
Confidence 5 47999999 9999999999999999999999 8999999999995 4 2 1 2
Q ss_pred CceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhcc---------ccc-cccc
Q 008592 269 NANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSK---------KIR-SLAT 338 (560)
Q Consensus 269 ~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---------~l~-~~~~ 338 (560)
.+||.+.+..... ......|+-...... +.. + ..+........+.|.. .+. .|..
T Consensus 333 geR~dvlVd~~~~-------~g~~~~L~~~~~~~~-----~g~-~--~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~ 397 (612)
T 2g23_A 333 AERFDLLVDFRAL-------GGRRLRLVDKGPGAP-----AGT-P--DPLGGVRYPEVMEFRVRETCEEDSFALPEVLSG 397 (612)
T ss_dssp TCEEEEEEECTTC-------TTCEEEEEECCTTSC-----TTS-C--BGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCS
T ss_pred cCeEEEEEECCCC-------CCCEEEEEeCCccCC-----CCc-c--ccccCccccceEEEEEccCCCCCCCCCChhhcc
Confidence 3466665543211 011112221110000 000 0 0000000000000000 000 0000
Q ss_pred CCCCCCCCCCc--ceeEEEEe---ccCCcCC-----------------CCCC--cccCCCCCeeeeeecceeccCCchhh
Q 008592 339 AKFPAKVPMKV--DRRFFFTV---GLGLSPC-----------------PQNQ--TCQGPNNTKLAASVNNVSFVQPNVAL 394 (560)
Q Consensus 339 ~~~p~~~p~~~--~~~~~~~~---~~~~~~~-----------------~~~~--~~~~~~~~~~~~~in~~~~~~p~~~~ 394 (560)
..+ .++..+ .+++.+.. ....... +... .....+|....|++|+..|
T Consensus 398 -~~~-~l~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~------- 468 (612)
T 2g23_A 398 -SFR-RMSHDIPHGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATF------- 468 (612)
T ss_dssp -SCC-CCCTTSCCEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECST-------
T ss_pred -ccc-cCCcccccceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccC-------
Confidence 000 000010 11111110 0000000 0000 0000011112233333322
Q ss_pred hHHhhccCCCCcccCCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEE
Q 008592 395 LQAHFFNRSKGVYTTDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVA 474 (560)
Q Consensus 395 l~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~ 474 (560)
.....+.++.|++|+|+|.|.+ .+.|||||||+.|||++
T Consensus 469 --------------------------------------~~~~~~~v~~G~~v~w~l~N~~---~~~HPiHlHg~~F~Vl~ 507 (612)
T 2g23_A 469 --------------------------------------NDGLGFTIGEGTHEQWTFLNLS---PILHPMHIHLADFQVLG 507 (612)
T ss_dssp --------------------------------------TSCCCEEEETTCEEEEEEEECS---SSCEEEEESSCCEEEEE
T ss_pred --------------------------------------CCCCceEecCCCEEEEEEEeCC---CCCCCeEEcCceEEEec
Confidence 1123478899999999999975 48999999999999999
Q ss_pred eCCCCC---CCCCCC------------CCCCCCCCCccceeEeCCCCEEEEEEEec-CceeeEEEeechhhhhcccEEEE
Q 008592 475 QGFGNF---DPNKDP------------AKFNLVDPAERNTVGVPSGGWVAIRFLAD-NPGVWFMHCHLEVHTSWGLKMAW 538 (560)
Q Consensus 475 ~~~g~~---~~~~~~------------~~~~~~~p~~rDTv~vpp~g~v~irf~ad-npG~w~~HCHil~H~d~GMm~~~ 538 (560)
++.+.+ +..... ..++..++.|||||.|+|+++++|+|+++ |||.|||||||++|+|.|||+.|
T Consensus 508 r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f 587 (612)
T 2g23_A 508 RDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPF 587 (612)
T ss_dssp EEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEE
T ss_pred ccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEE
Confidence 853322 111000 23455677899999999999999999999 99999999999999999999999
Q ss_pred EEcCCC
Q 008592 539 IVNDGK 544 (560)
Q Consensus 539 ~V~~~~ 544 (560)
+|.+.+
T Consensus 588 ~V~p~~ 593 (612)
T 2g23_A 588 VVMPPE 593 (612)
T ss_dssp EEECHH
T ss_pred EECchh
Confidence 997643
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=1e-55 Score=446.70 Aligned_cols=144 Identities=27% Similarity=0.499 Sum_probs=129.3
Q ss_pred ceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 36 ITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
++|+|+|++++..++. +|..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+..++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4799999999999887 578889999999999999999999999999999999999999999999988889999999999
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeecccccc----ccceEeEEEeCCCCCCCCCCCCCcceeEEeeecccc
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISWLR----ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKA 181 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~ 181 (560)
+|+||++++|+|++ +++||||||||.+.+. +||+|+|||++++..+.+. ..++|++|+|+||+++
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~ 149 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSS 149 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGG
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccc
Confidence 99999999999998 7999999999997653 7999999999875432111 3488999999999864
No 19
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.7e-53 Score=425.33 Aligned_cols=142 Identities=28% Similarity=0.403 Sum_probs=126.8
Q ss_pred hccCceEEEEEEEEEEEeeec-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITRL-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
...+.+++|+|++++..+... |..+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++. .++||+|+
T Consensus 29 ~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~ 105 (288)
T 3gdc_A 29 PDGRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPG 105 (288)
T ss_dssp TTSCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTT
T ss_pred CCCCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCC
Confidence 346678999999999888764 89999999999999999999999999999999999999999999982 46999999
Q ss_pred cCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeecccc
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKA 181 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~ 181 (560)
++||+|+||++++|+|++ +++||||||||.+. +. +||+|+|||+++...+ ..++|++|+++||+.+
T Consensus 106 ~~~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~~----~~d~e~~l~~~d~~~~ 175 (288)
T 3gdc_A 106 IGAGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGRP----PADDEMVMVMNGYNTD 175 (288)
T ss_dssp STTCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCCC----CCSEEEEEEEEEECCS
T ss_pred ccceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccCC----CCcceEEEEEeeEecC
Confidence 999999999999999998 89999999999974 33 8999999999886532 3478999999998754
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=3.2e-51 Score=418.34 Aligned_cols=211 Identities=30% Similarity=0.504 Sum_probs=173.5
Q ss_pred ceEEEEEEEEEEEeeec-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCcc
Q 008592 36 ITRHYKFHIKMQNITRL-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQC 114 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~ 114 (560)
++++|+|++++..++++ |.++.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999875 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCeEEEEEEEcccCcceeEeecccc--c-c-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHHHHHH
Q 008592 115 PIQTGQSYVYNFTVTGQRGTLFWHAHISW--L-R-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETIINEA 190 (560)
Q Consensus 115 ~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 190 (560)
+|+||++|+|+|++ .++||||||||... | . +||+|+|||++++....+ ...++|++|+|+||+.......
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~~---- 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADKY---- 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTCT----
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheeccccccc----
Confidence 99999999999998 68999999999876 3 3 799999999987543211 1247899999999987322110
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCC
Q 008592 191 MQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDA 260 (560)
Q Consensus 191 ~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 260 (560)
...+.....++.++|||+..+ ....+++++|++|||||+|++. ..+.|+|+||+|+||+.||
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~-~~h~~hlhGh~f~vi~~DG 217 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGG-GIHAMHSHGHDMLVTHKDG 217 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSS-SCEEEEETTCCEEEEEETT
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCC-ceEEEEECCcEEEEEEeCC
Confidence 001111124689999999754 2345889999999999999884 3677777777777777765
No 21
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=1.6e-51 Score=408.53 Aligned_cols=135 Identities=25% Similarity=0.385 Sum_probs=112.9
Q ss_pred hccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 32 KHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
.+.|.+|+|+|++++.. .+.....++++||++|||+||+++||+|+|+|+|+++++++|||||+++.. ++||++ +
T Consensus 2 ~~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~ 76 (276)
T 3kw8_A 2 PAGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-M 76 (276)
T ss_dssp --CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-T
T ss_pred CCcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-C
Confidence 35789999999998743 333445677899999999999999999999999999999999999999986 499999 9
Q ss_pred CccccCCCCeEEEEEEEcc------------cCcceeEeecccc------cc-ccceEeEEEeCCCCCCCCCCCCCccee
Q 008592 112 TQCPIQTGQSYVYNFTVTG------------QRGTLFWHAHISW------LR-ATLYGPIIILPKQQASYPFPQPFEEVP 172 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 172 (560)
+||+|+||++|+|+|++.+ ++||||||||.++ |. +||+|+|||+++.... .|+|++
T Consensus 77 t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~~-----~drE~~ 151 (276)
T 3kw8_A 77 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 151 (276)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred CcCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCcc-----cccceE
Confidence 9999999999999999843 3799999999975 33 7999999999886421 256666
Q ss_pred EEee
Q 008592 173 IIFG 176 (560)
Q Consensus 173 l~~~ 176 (560)
|+++
T Consensus 152 l~l~ 155 (276)
T 3kw8_A 152 IVFN 155 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 6554
No 22
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=1.7e-51 Score=412.28 Aligned_cols=138 Identities=22% Similarity=0.381 Sum_probs=110.9
Q ss_pred hhhccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
..+..+.+|+|+|.+++..-. ...+.++.+||++|||+||+++||+|+|+|+|+|++++||||||+++.+. +||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDE--LYGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETT--EEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT
T ss_pred CcccCCCEEEEEEEEEecCCC--ceeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc
Confidence 345678999999999875422 13455666799999999999999999999999999999999999998754 99997
Q ss_pred CcCccccCCCCeEEEEEEEc------------ccCcceeEeecccccc-------ccceEeEEEeCCCCCCCCCCCCCcc
Q 008592 110 YVTQCPIQTGQSYVYNFTVT------------GQRGTLFWHAHISWLR-------ATLYGPIIILPKQQASYPFPQPFEE 170 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 170 (560)
++||+|+||++|+|+|+++ .++||||||||.+++. +||+|+|||+++... ..|+|
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 8999999999999999974 2689999999987642 599999999987642 22566
Q ss_pred eeEEeee
Q 008592 171 VPIIFGE 177 (560)
Q Consensus 171 ~~l~~~d 177 (560)
++|+++|
T Consensus 172 ~~l~~~~ 178 (299)
T 3t9w_A 172 FTVVFND 178 (299)
T ss_dssp EEEEEET
T ss_pred ceeeeee
Confidence 6666544
No 23
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=1.2e-50 Score=409.17 Aligned_cols=138 Identities=25% Similarity=0.404 Sum_probs=115.4
Q ss_pred hhhccCceEEEEEEEEEEEeeecC-ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITRLC-QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~~g-~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv 108 (560)
.+.+.|.+|+++|.+++ -++| ..+.++..||++|||+||+++||+|+|+|+|+|+++++|||||+++... +||+
T Consensus 6 ~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~ 80 (313)
T 3tas_A 6 TAPAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGT 80 (313)
T ss_dssp BCCCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCS
T ss_pred cCCCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCC
Confidence 45567888999988753 2455 3455677899999999999999999999999999999999999999765 9999
Q ss_pred CCcCccccCCCCeEEEEEEEc------------ccCcceeEeecccccc-------ccceEeEEEeCCCCCCCCCCCCCc
Q 008592 109 AYVTQCPIQTGQSYVYNFTVT------------GQRGTLFWHAHISWLR-------ATLYGPIIILPKQQASYPFPQPFE 169 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~ 169 (560)
+ ++||+|+||++|+|+|++. .++||||||||..++. +||+|+|||+++.+. ..|+
T Consensus 81 ~-~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~ 154 (313)
T 3tas_A 81 K-QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDR 154 (313)
T ss_dssp T-TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSE
T ss_pred c-cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccc
Confidence 8 6999999999999999862 3689999999987642 699999999988643 2377
Q ss_pred ceeEEeeec
Q 008592 170 EVPIIFGEW 178 (560)
Q Consensus 170 e~~l~~~d~ 178 (560)
|++|+|+||
T Consensus 155 e~~l~~~d~ 163 (313)
T 3tas_A 155 THTIVFNDM 163 (313)
T ss_dssp EEEEEEETT
T ss_pred cceeeccch
Confidence 888888764
No 24
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.2e-50 Score=450.59 Aligned_cols=224 Identities=16% Similarity=0.225 Sum_probs=165.0
Q ss_pred EEEEEEEEeeec-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC--------c
Q 008592 41 KFHIKMQNITRL-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY--------V 111 (560)
Q Consensus 41 ~l~~~~~~~~~~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~--------~ 111 (560)
.+.++++..+.. |..+..|+ ++|||+||+++||+|+|+|+|+|+++++|||||++++.. +||+|+ +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 444444333332 44455553 899999999999999999999999999999999998753 666664 8
Q ss_pred CccccCCCCeEEEEEEEcc---------cCcceeEeeccccc--c-ccceEeEEEeCCCCCCCCCCCCCcceeEEeee--
Q 008592 112 TQCPIQTGQSYVYNFTVTG---------QRGTLFWHAHISWL--R-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGE-- 177 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d-- 177 (560)
|||+|+||++|+|+|++++ ++||||||||.+.+ . +||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999853 46999999999873 4 89999999999765332221223788888764
Q ss_pred ----ccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCC-eEEEEEcCCe
Q 008592 178 ----WWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALND-ELFFSIANHT 252 (560)
Q Consensus 178 ----~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~-~~~~~i~gh~ 252 (560)
|++......+.. ..........+.++|||+.. | ..+.+++++|++|||||||++... .+.|+|+||.
T Consensus 205 e~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~ING~~~----~---~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~ 276 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQD-RDAASARAWPKMHTVNGYVN----R---SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHT 276 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT----B---CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCC
T ss_pred CCcccccccccccccc-CCCccccccCceEEECCccC----C---CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCE
Confidence 554433221111 11111222357789999963 2 346789999999999999999775 7899999999
Q ss_pred EEEEE--eCCCccCCCC---------CCceEEEEec
Q 008592 253 LTIVE--TDAVYAKSKA---------PNANFLIAAR 277 (560)
Q Consensus 253 ~~via--~DG~~v~p~~---------~~~~y~i~~~ 277 (560)
|+|++ +|+..|.|.+ .+|.|.+.+.
T Consensus 277 f~Vvg~~~Dtv~v~Pg~~~~v~~~~~~pG~w~~hCH 312 (742)
T 2r7e_A 277 FLVRNHRQASLEISPITFLTAQTLLMDLGQFLLFCH 312 (742)
T ss_dssp CEETTEECCSCCCCTTCCCEEEECCCSCSEECCCCC
T ss_pred EEEEeEecceEEeCCCcEEEEEEEeCCCeeEEEEeC
Confidence 99998 7999998832 3466766655
No 25
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=2.2e-48 Score=396.89 Aligned_cols=135 Identities=26% Similarity=0.394 Sum_probs=109.6
Q ss_pred ccCceEEEEEEEEEEEeeecCceeE-EEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 33 HEGITRHYKFHIKMQNITRLCQTKS-IVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~~~~g~~~~-~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
..|.+++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+++. .++||++ +
T Consensus 44 ~~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~ 117 (343)
T 3cg8_A 44 AGGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-M 117 (343)
T ss_dssp -CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-T
T ss_pred CCCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-c
Confidence 478889999999875 3443221 2234899999999999999999999999999999999999988 4599999 8
Q ss_pred CccccCCCCeEEEEEEEcc------------cCcceeEeecccc------cc-ccceEeEEEeCCCCCCCCCCCCCccee
Q 008592 112 TQCPIQTGQSYVYNFTVTG------------QRGTLFWHAHISW------LR-ATLYGPIIILPKQQASYPFPQPFEEVP 172 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 172 (560)
+||+|.||++|+|+|++.+ ++||||||||.++ +. +||+|+|||+++.+.. .|+|++
T Consensus 118 t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~~-----pd~e~~ 192 (343)
T 3cg8_A 118 NKSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDVL-----PDATHT 192 (343)
T ss_dssp TTCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCCC-----CSEEEE
T ss_pred ccccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCCC-----CCceEE
Confidence 9999999999999999832 3599999999743 33 7999999999876431 367787
Q ss_pred EEeeec
Q 008592 173 IIFGEW 178 (560)
Q Consensus 173 l~~~d~ 178 (560)
|+++||
T Consensus 193 l~~~d~ 198 (343)
T 3cg8_A 193 IVFNDM 198 (343)
T ss_dssp EEEETT
T ss_pred EEcccc
Confidence 777653
No 26
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.4e-46 Score=429.82 Aligned_cols=253 Identities=17% Similarity=0.224 Sum_probs=183.3
Q ss_pred cCceEEEEEEEEEEEeeecC--c--------------------------eeEEE-------EECCC--------CCCcEE
Q 008592 34 EGITRHYKFHIKMQNITRLC--Q--------------------------TKSIV-------TVNGQ--------FPGPRI 70 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~g--~--------------------------~~~~~-------~~ng~--------~pGP~i 70 (560)
.+++|+|.+.|.+..++... . .+++. +||+. +|||+|
T Consensus 18 ~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP~I 97 (1065)
T 2j5w_A 18 WAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPII 97 (1065)
T ss_dssp --CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCCCE
T ss_pred ccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcCCeE
Confidence 47899999999998877431 1 22233 57877 999999
Q ss_pred EEecCCEEEEEEEeCCCcCeeEEecCcccC----CCcCCCCCCC--cCccccCCCCeEEEEEEEccc---------Ccce
Q 008592 71 IAREGDRLLIRVINNVKYNVTIHWHGVRQL----RSGWADGPAY--VTQCPIQTGQSYVYNFTVTGQ---------RGTL 135 (560)
Q Consensus 71 ~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~----~~~~~DGv~~--~tq~~i~pG~~~~Y~~~~~~~---------~Gt~ 135 (560)
|+++||+|+|+|+|+|+++++|||||++++ +.+|+||+++ +|||+|+||++|+|+|+++++ +|||
T Consensus 98 r~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~ 177 (1065)
T 2j5w_A 98 KAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTR 177 (1065)
T ss_dssp EEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEE
T ss_pred EEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEE
Confidence 999999999999999999999999999997 4477888888 899999999999999999544 4999
Q ss_pred eEeecccccc---ccceEeEEEeCCCCCCCCCC-CCCcceeEEee------eccccChHHHHHHHHhcCCC-------CC
Q 008592 136 FWHAHISWLR---ATLYGPIIILPKQQASYPFP-QPFEEVPIIFG------EWWKADTETIINEAMQTGGA-------PN 198 (560)
Q Consensus 136 wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~~~~~~~~~-------~~ 198 (560)
|||||.+.++ +||+|+|||++++...++.+ ..|+|++|+|+ ||++......+. ...+.. ..
T Consensus 178 wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~--~~p~~~~~~~~~~~~ 255 (1065)
T 2j5w_A 178 IYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYC--SEPEKVDKDNEDFQQ 255 (1065)
T ss_dssp EEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHC--SCGGGCCTTCHHHHH
T ss_pred EEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhh--cCccccccccccccc
Confidence 9999999875 89999999999875433322 35789999999 555543211110 000000 01
Q ss_pred CCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCC-CeEEEEEcCCeEEE--EEeCCCccCCC---------
Q 008592 199 ISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALN-DELFFSIANHTLTI--VETDAVYAKSK--------- 266 (560)
Q Consensus 199 ~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~-~~~~~~i~gh~~~v--ia~DG~~v~p~--------- 266 (560)
.++.++|||+... ..+.+++++|++|||||||+|.. ..+.|+|+||+|+| ..+|-..+.|.
T Consensus 256 ~~~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v~p~~~dtv~I~pGer~dVlv~~ 328 (1065)
T 2j5w_A 256 SNRMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTNKNYRIDTINLFPATLFDAYMVA 328 (1065)
T ss_dssp HTEEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEETTEEESEEEECBTCEEEEEEEC
T ss_pred cCcEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEECCeeecEEEECCCcEEEEEEEe
Confidence 2457999999741 34689999999999999999976 58999999999994 22233333331
Q ss_pred CCCceEEEEeccCCCCCCcCCCcceEEEEEecCC
Q 008592 267 APNANFLIAARPYATGPASFDNTTTAGVLEYDQP 300 (560)
Q Consensus 267 ~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 300 (560)
..+|.|+|++...... .....+.+.+.+.
T Consensus 329 ~~pG~y~i~~h~~~h~-----~~Gm~~~~~V~~~ 357 (1065)
T 2j5w_A 329 QNPGEWMLSCQNLNHL-----KAGLQAFFQVQEC 357 (1065)
T ss_dssp CSCEEEEEEECSHHHH-----HTTCEEEEEEECS
T ss_pred CCCeeEEEEecCcchh-----hCCCEEEEEEecC
Confidence 1246777776532110 1234667777764
No 27
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.3e-45 Score=423.27 Aligned_cols=404 Identities=13% Similarity=0.151 Sum_probs=246.8
Q ss_pred ceeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCC-CcCCCCCCCcCccccCCCCeEEEEEEEcc
Q 008592 54 QTKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLR-SGWADGPAYVTQCPIQTGQSYVYNFTVTG 130 (560)
Q Consensus 54 ~~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~-~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~ 130 (560)
.++.+.++||++|| |+|++++||+|+|+|.|. .+.+||||+++.+ +.|+||++.+| |+|.||.+++|+|.+ .
T Consensus 616 ~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~-~ 690 (1065)
T 2j5w_A 616 ESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP-D 690 (1065)
T ss_dssp HHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-C
T ss_pred ccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-C
Confidence 47789999999999 889999999999999975 3459999999999 89999999999 999999999999998 7
Q ss_pred cCcceeEeecccccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEe----eeccccChHHHHHHHHh-cCCCCCCCceEE
Q 008592 131 QRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIF----GEWWKADTETIINEAMQ-TGGAPNISDAFT 204 (560)
Q Consensus 131 ~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~~-~~~~~~~~d~~l 204 (560)
++||||||||...++ +||+|+|+|++......++..++.|.+++| .||++.....+...+.. .+.. +...+
T Consensus 691 ~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~~ 767 (1065)
T 2j5w_A 691 TEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNAF 767 (1065)
T ss_dssp SCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCTT
T ss_pred CCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---cccee
Confidence 999999999999987 899999999987554444445678899999 89999887765443221 1211 23333
Q ss_pred EcCcCC----------------CCCCC----------CCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEe
Q 008592 205 INGLPG----------------PFYNC----------AAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVET 258 (560)
Q Consensus 205 vNG~~~----------------~~~~~----------~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~ 258 (560)
+|+... ..|+. .+-..|+|.+++|+++++||+|.. ...+.++.+| +.+...
T Consensus 768 ~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~-~~~~sih~HG--l~~~~~ 844 (1065)
T 2j5w_A 768 LDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMA-TRPYSIHAHG--VQTESS 844 (1065)
T ss_dssp TCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECS-SSCBCCEESS--CBCSCS
T ss_pred ecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCC-CCCceEeecc--ccccCC
Confidence 443211 01211 012347899999999999999996 4556666666 444444
Q ss_pred CCCccCCCCCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhhhccccccc-c
Q 008592 259 DAVYAKSKAPNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQFSKKIRSL-A 337 (560)
Q Consensus 259 DG~~v~p~~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~ 337 (560)
++..+.|.+. -+|...+.... ... .....-+..-|-..... ...+...|..+ .
T Consensus 845 ~~~~i~PG~~-~ty~~~~~~~~-gp~--~~~~~~gt~wYhsh~~~----------------------~~q~~~GL~G~li 898 (1065)
T 2j5w_A 845 TVTPTLPGET-LTYVWKIPERS-GAG--TEDSACIPWAYYSTVDQ----------------------VKDLYSGLIGPLI 898 (1065)
T ss_dssp CCCCBCTTCE-EEEEEECCGGG-SCC--TTSCSEEEEEEECCTTH----------------------HHHHHTTCEEEEE
T ss_pred CCceeCCCCe-EEEEEEecCcc-CCc--cccCCceEEEEecCCCh----------------------HHhhhccccceeE
Confidence 4333444221 12322221100 000 00000111111110000 00000000000 0
Q ss_pred c-CCC---CCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccC-C-chhhhHHhhccCCCCcccCCC
Q 008592 338 T-AKF---PAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQ-P-NVALLQAHFFNRSKGVYTTDF 411 (560)
Q Consensus 338 ~-~~~---p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p-~~~~l~~~~~~~~~g~~~~~~ 411 (560)
. +.. +...+.+.+..+.+.. +.. +.. .....|..+|.. | ..+++...+..
T Consensus 899 V~~~~~l~~~~~~~d~D~~l~~~~-~d~------------~~~-~y~~~n~~~~~~~P~~v~~~~~~~~~---------- 954 (1065)
T 2j5w_A 899 VCRRPYLKVFNPRRKLEFALLFLV-FDE------------NES-WYLDDNIKTYSDHPEKVNKDDEEFIE---------- 954 (1065)
T ss_dssp EECCC-----CCCCEEEEEEEEEE-EEG------------GGS-TTHHHHHHHHCSCGGGCCTTCHHHHH----------
T ss_pred ecCcccccccCCCcceEEEEEEEe-ecC------------Ccc-eeeccCcccccCCccccCcchhhhhc----------
Confidence 0 000 0001111121111110 000 000 000112222210 1 01111000000
Q ss_pred CCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCC
Q 008592 412 PANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNL 491 (560)
Q Consensus 412 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~ 491 (560)
.+..+..++. .......+.++.|++|+|+|.|.+. ..+.||||||||.|+|++++
T Consensus 955 ---~~~~~~iNG~------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~~F~vv~~~--------------- 1009 (1065)
T 2j5w_A 955 ---SNKMHAINGR------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGHSFQYKHRG--------------- 1009 (1065)
T ss_dssp ---HTEEEEETTB------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSCCEEETTTT---------------
T ss_pred ---cCceEEECCc------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEcccEEEEEecC---------------
Confidence 0000111110 1112345789999999999999752 24799999999999998652
Q ss_pred CCCCccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 492 VDPAERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 492 ~~p~~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
|.|||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.|.+.++
T Consensus 1010 --p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1010 --VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp --CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred --CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 6899999999999999999999999999999999999999999999987654
No 28
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.6e-44 Score=384.05 Aligned_cols=390 Identities=15% Similarity=0.119 Sum_probs=241.9
Q ss_pred hccCceEEEEEEEEEEEeeecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 32 KHEGITRHYKFHIKMQNITRLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
...+.++++++.++...+..+| .+++|||++ ||+|+|++||+|+|+|+|.+...+++||||... .
T Consensus 23 ~~~~~~~~~~~~~~~~~~~f~g---~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~ 87 (447)
T 2dv6_A 23 AHAPVVFTLRTGIAEGRMVYIG---VGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------R 87 (447)
T ss_dssp -CCCEEEEEEEEEETTEEEEEE---ESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------E
T ss_pred cCCCceEEEEEEecccEEEEec---cceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------c
Confidence 3456777888777654455444 456999999 999999999999999999998889999998642 2
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCCCCCCC-----CCCCcceeEEeeeccccChHH
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQASYPF-----PQPFEEVPIIFGEWWKADTET 185 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~~~~~-----~~~~~e~~l~~~d~~~~~~~~ 185 (560)
+||+|+||++++|+|++ .++||||||||..+++ +||+|.|+|+++....++. .....+++..+ |+.......
T Consensus 88 ~~~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~ 165 (447)
T 2dv6_A 88 SAIVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVR 165 (447)
T ss_dssp CCCBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEE
T ss_pred cceecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEE
Confidence 67999999999999998 6799999999998877 7999999999876432210 00001111111 110000000
Q ss_pred H-H--HHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCC-CCeEEEEEcCCeEEEEEeCCC
Q 008592 186 I-I--NEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAAL-NDELFFSIANHTLTIVETDAV 261 (560)
Q Consensus 186 ~-~--~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~ 261 (560)
+ + ......-......+.+++||+. ..+.+++++|++|||||+|.+. ...+.++++|. ++.||.
T Consensus 166 ~~l~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~ 232 (447)
T 2dv6_A 166 IDLETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGA 232 (447)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGG
T ss_pred EEEEEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCC
Confidence 0 0 0000000001124678999984 2368999999999999999985 34577777774 368997
Q ss_pred c----cCCC---------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCCCCCCCCCCCCCCCCCCCCCCCchhhhh
Q 008592 262 Y----AKSK---------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPNGITTKNLPLLKPAAILPKFNDTNFVMQ 328 (560)
Q Consensus 262 ~----v~p~---------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 328 (560)
+ +.|. ..+|+||+++....... .. .....+.+.+.... .+|.....
T Consensus 233 ~~~~~i~pG~~~~~~~~~~~~G~~~yh~h~~~~~~-~~-~~Gl~g~l~v~~~~--------------~~P~~d~~----- 291 (447)
T 2dv6_A 233 AAFTQTDPGEETVVTFKALIPGIYVYHCATPSVPT-HI-TNGMYGLLLVEPEG--------------GLPQVDRE----- 291 (447)
T ss_dssp GGGCCBCTTCEEEEEEECCSCEEEEEECCSSSHHH-HH-HTTCEEEEEEECTT--------------CSCCCSEE-----
T ss_pred CccEEeCCCCEEEEEEECCCCeEEEEEeCCCChHH-HH-hCCCEEEEEEeCCC--------------CCCCCCee-----
Confidence 4 3331 12467777765310000 00 01234555555321 01111100
Q ss_pred hcccccccccCCCCCCCCCCcceeEEEEeccCCcCCCCCCcccCCCCCeeeeeecceeccCCchhhhHHhhccCCCCccc
Q 008592 329 FSKKIRSLATAKFPAKVPMKVDRRFFFTVGLGLSPCPQNQTCQGPNNTKLAASVNNVSFVQPNVALLQAHFFNRSKGVYT 408 (560)
Q Consensus 329 ~~~~l~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~l~~~~~~~~~g~~~ 408 (560)
+.-.+....... . . ...... .+..... . ......|.+||+.+...
T Consensus 292 ~~~~~~~~~~~~-~--~--~~~g~~--~~~~~~~--------~--~~~~~~~~iNG~~~~~~------------------ 336 (447)
T 2dv6_A 292 FYVMQGEIYTVK-S--F--GTSGEQ--EMDYEKL--------I--NEKPEYFLFNGSVGSLT------------------ 336 (447)
T ss_dssp EEEEEEEECBSS-C--T--TCCEEC--CBBHHHH--------H--TTCCSEEEETTSTTCCC------------------
T ss_pred EEEEecccccCC-c--c--cccccc--cCChHHh--------h--ccCCCEEEECCcccCCC------------------
Confidence 000000000000 0 0 000000 0000000 0 00011345665432100
Q ss_pred CCCCCCCCccccCCCCCCCCccccCCcEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCC
Q 008592 409 TDFPANPPFKFNYTGTPPSNIMVSSGTKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAK 488 (560)
Q Consensus 409 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~ 488 (560)
...++.++.|++++|+|.|.+. ...||||||||+|+||+++.+ +
T Consensus 337 -------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~-~-------- 380 (447)
T 2dv6_A 337 -------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGS-V-------- 380 (447)
T ss_dssp -------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGC-S--------
T ss_pred -------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCc-c--------
Confidence 0134788999999999999652 468999999999999998532 1
Q ss_pred CCCCCCC-ccceeEeCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCCCC
Q 008592 489 FNLVDPA-ERNTVGVPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGKG 545 (560)
Q Consensus 489 ~~~~~p~-~rDTv~vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~~ 545 (560)
...|. +|||+.|+||++++|+|+++|||.|+||||+++|++.||+++|.|.....
T Consensus 381 --~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 381 --VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKN 436 (447)
T ss_dssp --SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSC
T ss_pred --cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCC
Confidence 12344 79999999999999999999999999999999999999999999976643
No 29
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=1.3e-43 Score=392.62 Aligned_cols=143 Identities=21% Similarity=0.287 Sum_probs=104.9
Q ss_pred cCceEEEEEEEEEEEeeec-------------C-ceeE--EEEE----------------CCCCCCcEEEEecCCEEEEE
Q 008592 34 EGITRHYKFHIKMQNITRL-------------C-QTKS--IVTV----------------NGQFPGPRIIAREGDRLLIR 81 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~--~~~~----------------ng~~pGP~i~~~~Gd~v~v~ 81 (560)
.+.+|+|.+-+++..+... | .-++ ...| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4789999999999887744 1 1111 2344 34789999999999999999
Q ss_pred EEeCCCcCeeEEecCcccCCCcCCCCCCCcC--------ccccCCCCeEEEEEEEccc-----Cc----ceeEeecccc-
Q 008592 82 VINNVKYNVTIHWHGVRQLRSGWADGPAYVT--------QCPIQTGQSYVYNFTVTGQ-----RG----TLFWHAHISW- 143 (560)
Q Consensus 82 ~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~t--------q~~i~pG~~~~Y~~~~~~~-----~G----t~wYH~H~~~- 143 (560)
|+|.|+++++|||||+++... +||+|+++ ||+|+||++|+|+|+++++ +| |||||||.+.
T Consensus 83 ~~N~l~~~~siH~HGl~~~~~--~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEKS--SEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCCC--CCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 999999999999999999754 99999887 9999999999999999654 57 9999999975
Q ss_pred -cc-ccceEeEEEeCCCCCCC--CCCCCCcceeEEeeec
Q 008592 144 -LR-ATLYGPIIILPKQQASY--PFPQPFEEVPIIFGEW 178 (560)
Q Consensus 144 -~~-~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d~ 178 (560)
|. +||+|+|||+++..... ..+..++|++|+|+||
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~ 199 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVF 199 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEE
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEee
Confidence 33 79999999999764321 1223468999999954
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=2.2e-42 Score=352.91 Aligned_cols=219 Identities=19% Similarity=0.231 Sum_probs=166.4
Q ss_pred hhhccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC
Q 008592 30 LAKHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 30 ~~~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv 108 (560)
.+++.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.+....||.
T Consensus 25 ~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~ 101 (333)
T 1mzy_A 25 VAASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGG 101 (333)
T ss_dssp SCSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGG
T ss_pred ccCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCC
Confidence 3467889999999999999887 5999999999999999999999999999999999 47899999998875446666
Q ss_pred CCcCccccCCCCeEEEEEEEcccCcceeEeecccc-----cc-ccceEeEEEeCCCCCC----CCCCCCCcceeEEeeec
Q 008592 109 AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW-----LR-ATLYGPIIILPKQQAS----YPFPQPFEEVPIIFGEW 178 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~-----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~ 178 (560)
++++| |+||++++|+|++ +++||||||||.++ |. +||+|+|||++++... .+. .+|+|++|+++||
T Consensus 102 ~~~~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~ 177 (333)
T 1mzy_A 102 GGLTL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPV-RYDTVYYIGESDH 177 (333)
T ss_dssp GGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBC-CCSEEEEEEEEEE
T ss_pred CceeE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCC-ccchheeeeeeee
Confidence 66764 9999999999998 78999999999974 54 8999999999765321 111 3488999999999
Q ss_pred cccC--hHHH---------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEE
Q 008592 179 WKAD--TETI---------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFS 247 (560)
Q Consensus 179 ~~~~--~~~~---------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~ 247 (560)
++.. ...+ +....... ....++.++|||+.+++. ..+.+++++|++||||++|++....+ ..
T Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~ 250 (333)
T 1mzy_A 178 YIPKDEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HL 250 (333)
T ss_dssp CCCBCTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EE
T ss_pred ccCccccccccccccccccccchhHHh-hccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EE
Confidence 8831 1110 00000000 113569999999975421 14579999999888777666543334 23
Q ss_pred EcCCeEEEEEeCCCcc
Q 008592 248 IANHTLTIVETDAVYA 263 (560)
Q Consensus 248 i~gh~~~via~DG~~v 263 (560)
+++|.++||+ ||.++
T Consensus 251 i~~h~~~Vi~-dG~~~ 265 (333)
T 1mzy_A 251 IGGHGDLVWE-TGKFH 265 (333)
T ss_dssp ETCCEEEEET-TCCTT
T ss_pred ECCCCeEEEe-CCccc
Confidence 7788888877 76544
No 31
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=3.4e-44 Score=361.19 Aligned_cols=119 Identities=18% Similarity=0.336 Sum_probs=95.9
Q ss_pred EEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc------C--ccccCCCCeEEEEEEE
Q 008592 57 SIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV------T--QCPIQTGQSYVYNFTV 128 (560)
Q Consensus 57 ~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~------t--q~~i~pG~~~~Y~~~~ 128 (560)
...++| ++|||+|++++||+|+|+|+|.++++++|||||++.... +||++.. + ||+|+||++|+|+|++
T Consensus 50 ~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~~ 126 (306)
T 1sdd_A 50 PQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWII 126 (306)
T ss_dssp CCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEEC
T ss_pred cccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEEe
Confidence 345678 689999999999999999999999999999999996544 6665543 3 7999999999999998
Q ss_pred cccC---------cceeEeecccc--cc-ccceEeEEEeCCCCCCC-CC-CCCCcceeEEeeec
Q 008592 129 TGQR---------GTLFWHAHISW--LR-ATLYGPIIILPKQQASY-PF-PQPFEEVPIIFGEW 178 (560)
Q Consensus 129 ~~~~---------Gt~wYH~H~~~--~~-~Gl~G~liV~~~~~~~~-~~-~~~~~e~~l~~~d~ 178 (560)
++++ ||||||||... |. +||+|+|||+++..... +. ...++|++|+++||
T Consensus 127 ~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~ 190 (306)
T 1sdd_A 127 SEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVF 190 (306)
T ss_dssp CGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEE
T ss_pred CCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEec
Confidence 5443 79999999876 43 89999999998743111 11 13478999999986
No 32
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=4.2e-44 Score=398.56 Aligned_cols=144 Identities=13% Similarity=0.159 Sum_probs=116.5
Q ss_pred ccCceEEEEEEEEEEEe--eecCc----------------eeEE-EEE-----CC-----------CCCCcEEEEecCCE
Q 008592 33 HEGITRHYKFHIKMQNI--TRLCQ----------------TKSI-VTV-----NG-----------QFPGPRIIAREGDR 77 (560)
Q Consensus 33 ~~~~~~~~~l~~~~~~~--~~~g~----------------~~~~-~~~-----ng-----------~~pGP~i~~~~Gd~ 77 (560)
..|.+|+|.|.+++..+ .|++. .+.+ +.| ++ ++|||+||+++||+
T Consensus 129 ~~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~ 208 (770)
T 2r7e_B 129 FQKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDN 208 (770)
T ss_dssp CCCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSC
T ss_pred CCCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCE
Confidence 47899999999999774 45542 1122 333 23 58999999999999
Q ss_pred EEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcc---------cCcceeEeeccccc--c-
Q 008592 78 LLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTG---------QRGTLFWHAHISWL--R- 145 (560)
Q Consensus 78 v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~---------~~Gt~wYH~H~~~~--~- 145 (560)
|+|+|+|.++++++|||||+++....+ ||+++ +||+|+||++|+|+|++++ ++||||||||.+.+ .
T Consensus 209 v~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~ 286 (770)
T 2r7e_B 209 IMVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVH 286 (770)
T ss_dssp EEEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHH
T ss_pred EEEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHh
Confidence 999999999999999999999998852 69998 9999999999999999854 89999999999874 3
Q ss_pred ccceEeEEEeCCCCCCC--CCCCCCcceeEEeeec
Q 008592 146 ATLYGPIIILPKQQASY--PFPQPFEEVPIIFGEW 178 (560)
Q Consensus 146 ~Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d~ 178 (560)
+||+|+|||+++..... .....++|++|+++++
T Consensus 287 ~GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~ 321 (770)
T 2r7e_B 287 SGLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIF 321 (770)
T ss_dssp TSCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEE
T ss_pred CCceeeEEECCCcccccccCCCccceEEEEEEeec
Confidence 89999999998764321 1123578998887654
No 33
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=7.3e-42 Score=347.43 Aligned_cols=243 Identities=19% Similarity=0.262 Sum_probs=194.0
Q ss_pred hccCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGP 108 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv 108 (560)
.+.+.+++|+|++++..+++ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||+
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~ 107 (327)
T 1kbv_A 33 RDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGG 107 (327)
T ss_dssp CSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGG
T ss_pred cCCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCC
Confidence 45788899999999999987 799999999999999999999999999999999996 589999999852 7888
Q ss_pred CCcCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChH
Q 008592 109 AYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE 184 (560)
Q Consensus 109 ~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~ 184 (560)
+..+ .|.||++++|+|++ +++||||||||.+. +. +||+|+|||++++. ++..|+|++++++||+++...
T Consensus 108 ~~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~ 180 (327)
T 1kbv_A 108 AAAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKK 180 (327)
T ss_dssp TTTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCT
T ss_pred Ccce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCcc
Confidence 7543 59999999999998 78999999999753 33 89999999998653 234688999999999987521
Q ss_pred HH-------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEE
Q 008592 185 TI-------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVE 257 (560)
Q Consensus 185 ~~-------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via 257 (560)
.. ..... + ..++.++|||+.+++.. .+.+++++|++|||||||+|..+.+.|+|+||+|+||+
T Consensus 181 ~~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~ 250 (327)
T 1kbv_A 181 GAQGLQPFDMDKAV--A---EQPEYVVFNGHVGALTG-----DNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVY 250 (327)
T ss_dssp TCCEEECBCHHHHH--H---TCCSEEEETTSTTTTSG-----GGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEE
T ss_pred ccccccccChhHhc--c---CCCceEEEcCcccCCCC-----ceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEE
Confidence 00 01111 1 24689999999875422 25799999999999999999888999999999999999
Q ss_pred eCCCccCCC-------------------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCC
Q 008592 258 TDAVYAKSK-------------------APNANFLIAARPYATGPASFDNTTTAGVLEYDQP 300 (560)
Q Consensus 258 ~DG~~v~p~-------------------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~ 300 (560)
.||++++|. ..+|+|++++...... ......|+|+|++.
T Consensus 251 ~DG~~~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~----~~~g~~a~l~~~g~ 308 (327)
T 1kbv_A 251 VEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRA----FNKGALGQLKVEGA 308 (327)
T ss_dssp GGGSSCEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHH----HHSSCEEEEEEESC
T ss_pred cCCCcCCCCceeEEEECCCCEEEEEEEeCCCeEEEEEecccccc----ccCCcEEEEEECCC
Confidence 999988761 1235566655432110 12245899999875
No 34
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=1.8e-41 Score=347.35 Aligned_cols=143 Identities=19% Similarity=0.284 Sum_probs=119.7
Q ss_pred hccCceEEEEEEEEEEEeee--cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNITR--LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
++.+.+++|+|++++..++. ||..+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++.+....||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 55778999999999998884 59999999999999999999999999999999998 77999999887654344545
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCC----CCCCCCCcceeEEeeeccc
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQAS----YPFPQPFEEVPIIFGEWWK 180 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 180 (560)
.++| |.||++++|+|++ .++||||||||.++ |. +||+|+|||++++... .+. .+++|++|+++||++
T Consensus 110 ~~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 5654 9999999999998 68999999999874 44 8999999999865311 111 357899999999997
Q ss_pred c
Q 008592 181 A 181 (560)
Q Consensus 181 ~ 181 (560)
.
T Consensus 186 ~ 186 (340)
T 2bw4_A 186 P 186 (340)
T ss_dssp C
T ss_pred c
Confidence 3
No 35
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=1.1e-39 Score=333.61 Aligned_cols=217 Identities=20% Similarity=0.264 Sum_probs=160.8
Q ss_pred hccCceEEEEEEEEEEEee--ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC
Q 008592 32 KHEGITRHYKFHIKMQNIT--RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA 109 (560)
Q Consensus 32 ~~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~ 109 (560)
.+.+.+++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+
T Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~ 103 (336)
T 1oe1_A 27 KSGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGA 103 (336)
T ss_dssp CCCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCc
Confidence 3467889999999998876 5599999999999999999999999999999999973 4566666665555677777
Q ss_pred CcCccccCCCCeEEEEEEEcccCcceeEeecccc----cc-ccceEeEEEeCCCCCCCC--C-CCCCcceeEEeeecccc
Q 008592 110 YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW----LR-ATLYGPIIILPKQQASYP--F-PQPFEEVPIIFGEWWKA 181 (560)
Q Consensus 110 ~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~~~--~-~~~~~e~~l~~~d~~~~ 181 (560)
.++| |.||++++|+|++ +++||||||||.++ |. +||+|+|||++++....+ . ..+|+|++|+++||++.
T Consensus 104 ~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~ 180 (336)
T 1oe1_A 104 KLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIP 180 (336)
T ss_dssp GGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCC
T ss_pred ceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeec
Confidence 7775 9999999999998 78999999999975 33 899999999986532111 1 13588999999999884
Q ss_pred Ch--HHH---------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEE-EEEc
Q 008592 182 DT--ETI---------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELF-FSIA 249 (560)
Q Consensus 182 ~~--~~~---------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~-~~i~ 249 (560)
.. ..+ +....... ....++.++|||+.+++. ..+.+++++|++||| +|++..+.+. +.|+
T Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i~ 252 (336)
T 1oe1_A 181 KGPDGKYKDYATLAESYGDTVQVM-RTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLIG 252 (336)
T ss_dssp BCTTSSBCCCSSTGGGHHHHHHHH-HTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEETT
T ss_pred cccCCceeecccccccccchhhHh-hcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEEC
Confidence 11 110 00000000 013568999999976431 136899999997665 6666555544 4458
Q ss_pred CCeEEEEEeCCCcc
Q 008592 250 NHTLTIVETDAVYA 263 (560)
Q Consensus 250 gh~~~via~DG~~v 263 (560)
+|.|+|++ ||.++
T Consensus 253 gh~~~Vi~-DG~~~ 265 (336)
T 1oe1_A 253 GHGDWVWE-TGKFA 265 (336)
T ss_dssp CCEEEEET-TCCTT
T ss_pred CcCceEeC-CCcCc
Confidence 89888886 87655
No 36
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=3.2e-39 Score=342.47 Aligned_cols=247 Identities=18% Similarity=0.205 Sum_probs=194.1
Q ss_pred hhccCceEEEEEEEEEEEee-ecCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCC
Q 008592 31 AKHEGITRHYKFHIKMQNIT-RLCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADG 107 (560)
Q Consensus 31 ~~~~~~~~~~~l~~~~~~~~-~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DG 107 (560)
.++.+.+++|+|++++..++ .+|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+++ +||
T Consensus 22 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG 96 (442)
T 2zoo_A 22 NRDHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGG 96 (442)
T ss_dssp CCSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGG
T ss_pred ccCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCC
Confidence 35678899999999999998 5899999999999999999999999999999999986 599999999874 688
Q ss_pred CCCcCccccCCCCeEEEEEEEcccCcceeEeecccc---cc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccCh
Q 008592 108 PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW---LR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADT 183 (560)
Q Consensus 108 v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~ 183 (560)
++..+ +|.||++++|+|++ +++||||||||.++ +. +||+|+|||++++.. +.+++|++|+++||++...
T Consensus 97 ~~~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~ 169 (442)
T 2zoo_A 97 GAESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGE 169 (442)
T ss_dssp GGGGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSC
T ss_pred CCccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCc
Confidence 77643 69999999999998 78999999998643 33 899999999976532 2458999999999998754
Q ss_pred HHH-----HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEe
Q 008592 184 ETI-----INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVET 258 (560)
Q Consensus 184 ~~~-----~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~ 258 (560)
... +...... ...+++++|||+..++. ..+.+++++|++|||||+|+|....+.|+|+||+|+||+.
T Consensus 170 ~~~~~~~~~~~~~~~---~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~ 241 (442)
T 2zoo_A 170 FGEAGLQPFDMAKAI---DEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYV 241 (442)
T ss_dssp TTCCEEECBCHHHHH---TTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred ccccccccCChhHhc---cCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEec
Confidence 110 0000001 13569999999975321 1257999999999999999998889999999999999999
Q ss_pred CCCccCCC-------------------CCCceEEEEeccCCCCCCcCCCcceEEEEEecCCC
Q 008592 259 DAVYAKSK-------------------APNANFLIAARPYATGPASFDNTTTAGVLEYDQPN 301 (560)
Q Consensus 259 DG~~v~p~-------------------~~~~~y~i~~~~~~~~~~~~~~~~~~ail~y~~~~ 301 (560)
||.+++|. ..+|+|++++..... .......++++|.+..
T Consensus 242 DG~~~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~----~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 242 EGGSLKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFR----AFNKGALAMLKVEGPD 299 (442)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHH----HHTTSCEEEEEEESCC
T ss_pred CCccCCCccceEEEECCCeeEEEEEEcCCCCeEEEEeccccc----ccccCceEEEEecCCC
Confidence 99988761 123555555543211 0123467899998764
No 37
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.8e-32 Score=291.20 Aligned_cols=210 Identities=20% Similarity=0.250 Sum_probs=169.9
Q ss_pred cCceEEEEEEEEEEEeee-cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCCCC
Q 008592 34 EGITRHYKFHIKMQNITR-LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAY 110 (560)
Q Consensus 34 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv~~ 110 (560)
.+.++.|+|++.+..... +|..+.+|+|||++|||+|++++||+++|+|.|.+. ..++|||||+.. +||++.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 456778888887766665 588889999999999999999999999999999985 579999999852 799886
Q ss_pred cCccccCCCCeEEEEEEEcccCcceeEeeccc---ccc-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHH
Q 008592 111 VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS---WLR-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI 186 (560)
Q Consensus 111 ~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 186 (560)
.+| |.||++++|.|++ +++||||||||.. .+. .||+|+|+|+++.. ++..++|++++++||++......
T Consensus 235 ~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~ 307 (447)
T 2dv6_A 235 FTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGT 307 (447)
T ss_dssp GCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTC
T ss_pred cEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccc
Confidence 654 9999999999998 6899999999974 233 89999999997643 23457889999999987532100
Q ss_pred -------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeC
Q 008592 187 -------INEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETD 259 (560)
Q Consensus 187 -------~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~D 259 (560)
..... + ..++.++|||+..++.. ...+++++|++|||||+|++....+.|+|+||.|+||+.|
T Consensus 308 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~~-----~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~d 377 (447)
T 2dv6_A 308 SGEQEMDYEKLI--N---EKPEYFLFNGSVGSLTR-----SHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSL 377 (447)
T ss_dssp CEECCBBHHHHH--T---TCCSEEEETTSTTCCCC-----CCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGG
T ss_pred cccccCChHHhh--c---cCCCEEEECCcccCCCC-----CcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcC
Confidence 01111 1 23588999999865321 2479999999999999999988899999999999999999
Q ss_pred CCccCC
Q 008592 260 AVYAKS 265 (560)
Q Consensus 260 G~~v~p 265 (560)
|.++++
T Consensus 378 G~~~~~ 383 (447)
T 2dv6_A 378 GSVVSP 383 (447)
T ss_dssp GCSSSC
T ss_pred CcccCC
Confidence 998865
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=99.96 E-value=4.6e-31 Score=293.51 Aligned_cols=181 Identities=22% Similarity=0.304 Sum_probs=137.0
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCC-----CCCCcCccccCCCCeEEEEEEEcccCc-----
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWAD-----GPAYVTQCPIQTGQSYVYNFTVTGQRG----- 133 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~D-----Gv~~~tq~~i~pG~~~~Y~~~~~~~~G----- 133 (560)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+|+| |+++++||+|+||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999985 45665 567788999999999999999966554
Q ss_pred ----ceeEeecccccc---ccceEeEEEeCCCCCC-CC-CCCCCcceeEEeee------ccccChHHHHHHHHhcC-CC-
Q 008592 134 ----TLFWHAHISWLR---ATLYGPIIILPKQQAS-YP-FPQPFEEVPIIFGE------WWKADTETIINEAMQTG-GA- 196 (560)
Q Consensus 134 ----t~wYH~H~~~~~---~Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~~-~~- 196 (560)
|||||||.+.+. +||+|+|||+++.... .. ....|+|++|++++ |++.... ..+.... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 999999998753 7999999999875321 11 11357899999965 4443211 1111000 00
Q ss_pred ------CCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCC-CeEEEEEcCCeEEEE
Q 008592 197 ------PNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALN-DELFFSIANHTLTIV 256 (560)
Q Consensus 197 ------~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~-~~~~~~i~gh~~~vi 256 (560)
......++|||+... + . .+.+++|++|||||||++.. ..+.|||+||.|+|+
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~----~---~-~l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~ 662 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD----S---L-QLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK 662 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS----C---C-CCCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB
T ss_pred cccccccccCceeeecCcCCC----C---C-cEEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe
Confidence 001234789999642 1 2 38999999999999998754 468999999999997
No 39
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.72 E-value=1.4e-16 Score=161.36 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=82.5
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+.+.++.|++++|+|.|.+. ...|+||||||.|+|++...+. ..|.++|++.|.||+.+.|.|+++
T Consensus 214 ~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~------------~~p~~~d~l~l~pGer~dv~v~~~ 279 (327)
T 1kbv_A 214 NALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK------------LINENVQSTIVPAGGSAIVEFKVD 279 (327)
T ss_dssp GCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS------------CEECSBSEEEECTTEEEEEEEEEC
T ss_pred eeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc------------CCCCceeEEEECCCCEEEEEEEeC
Confidence 34788999999999999652 4689999999999999985331 236789999999999999999999
Q ss_pred CceeeEEEeechhhh-hcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHLEVHT-SWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHil~H~-d~GMm~~~~V~~~~ 544 (560)
+||.|.+|||+++|. ..||++.+.|....
T Consensus 280 ~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 280 IPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp SCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred CCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 999999999999995 89999999997654
No 40
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.56 E-value=6.9e-14 Score=147.82 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=81.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++++|.|.|.+. ...|+||+||+.|+|++...+ +..|.+.|++.|.||+...|.|++++
T Consensus 205 ~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~------------~~~p~~~~~~~l~pg~r~~v~v~~~~ 270 (442)
T 2zoo_A 205 SLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGG------------SLKNHNVQTTLIPAGGAAIVEFKVEV 270 (442)
T ss_dssp CEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS------------SCEECSBSEEEECTTEEEEEEEECCS
T ss_pred ceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCc------------cCCCccceEEEECCCeeEEEEEEcCC
Confidence 4788999999999999652 368999999999999998532 12267899999999999999999999
Q ss_pred ceeeEEEeechhh-hhcccEEEEEEcCCC
Q 008592 517 PGVWFMHCHLEVH-TSWGLKMAWIVNDGK 544 (560)
Q Consensus 517 pG~w~~HCHil~H-~d~GMm~~~~V~~~~ 544 (560)
||.|.+|||.+.| .+.||+..|.|....
T Consensus 271 ~G~y~~~~~~~~~~~~~g~~a~l~v~~~~ 299 (442)
T 2zoo_A 271 PGTFILVDHSIFRAFNKGALAMLKVEGPD 299 (442)
T ss_dssp CEEEEEEESSTHHHHTTSCEEEEEEESCC
T ss_pred CCeEEEEecccccccccCceEEEEecCCC
Confidence 9999999999999 599999999997654
No 41
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.56 E-value=1.5e-15 Score=127.31 Aligned_cols=90 Identities=21% Similarity=0.194 Sum_probs=71.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC--cCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeec
Q 008592 63 GQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS--GWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAH 140 (560)
Q Consensus 63 g~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H 140 (560)
-+|++|+|++++||+|+ ++|.++.++++||||...+.. ..+||.+ .+++.|.||++++|+|++++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36778999999999975 579998999999999876531 1133332 356789999999999986568999999999
Q ss_pred cccccccceEeEEEeC
Q 008592 141 ISWLRATLYGPIIILP 156 (560)
Q Consensus 141 ~~~~~~Gl~G~liV~~ 156 (560)
.| ..+||.|.|+|++
T Consensus 91 ~H-~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PH-RGAGMVGKITVEG 105 (105)
T ss_dssp TT-GGGTCEEEEEECC
T ss_pred Cc-hhcCCEEEEEEcC
Confidence 43 2479999999974
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.50 E-value=7.7e-14 Score=137.71 Aligned_cols=100 Identities=22% Similarity=0.358 Sum_probs=84.2
Q ss_pred EEECCCC--CCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC--------CCcCccccCCCCeEEEEEEE
Q 008592 59 VTVNGQF--PGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP--------AYVTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 59 ~~~ng~~--pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv--------~~~tq~~i~pG~~~~Y~~~~ 128 (560)
|+|||+. ++|.|++++||+|+++|.|.....+++||||...... .||. .....+.|.||++++|+|.+
T Consensus 157 ~~iNG~~~~~~p~i~v~~G~~vri~l~N~~~~~Hp~HlHG~~f~v~--~~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~ 234 (276)
T 3kw8_A 157 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 234 (276)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred cccceecccCCCCEEEecCCEEEEEEecCCCcceeEEEccceeEEe--ccCccCCCcccccCCccEEeCCCceEEEEEEe
Confidence 6999998 8899999999999999999999999999999766543 3442 12455779999999999997
Q ss_pred cc--cCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 129 TG--QRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 129 ~~--~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
.+ .+|+||||||...+. .||.|.|+|+++++.
T Consensus 235 ~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~~ 269 (276)
T 3kw8_A 235 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 269 (276)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred ccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCCC
Confidence 32 699999999987765 899999999988653
No 43
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.42 E-value=1.1e-12 Score=111.15 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=81.4
Q ss_pred EEEEEEEEEEEee-----ecCceeEE-EEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCc
Q 008592 38 RHYKFHIKMQNIT-----RLCQTKSI-VTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYV 111 (560)
Q Consensus 38 ~~~~l~~~~~~~~-----~~g~~~~~-~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~ 111 (560)
++|.+.+.+.... .++..... ..||++++++.|++++||+|+++++|.... +||+..... |+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~~----~~--- 69 (112)
T 1iby_A 2 HNFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDAF----GV--- 69 (112)
T ss_dssp CCEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGGG----TE---
T ss_pred CceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcCC----Cc---
Confidence 4566666654432 34555555 488999999999999999999999999865 566554421 22
Q ss_pred CccccCCCCeEEEEEEEcccCcceeEeeccccccccceEeEEEeC
Q 008592 112 TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 112 tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+..+.||++++|+|++ +++|+||||||.+....+|.|.|+|.+
T Consensus 70 -~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 -QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp -EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred -eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 4679999999999997 789999999998876666999999974
No 44
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.37 E-value=1.5e-12 Score=116.24 Aligned_cols=99 Identities=16% Similarity=0.195 Sum_probs=72.1
Q ss_pred cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCC------CCc-CccccCCCC--eE
Q 008592 52 LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGP------AYV-TQCPIQTGQ--SY 122 (560)
Q Consensus 52 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv------~~~-tq~~i~pG~--~~ 122 (560)
.++....+.++|. ++|+|+|++||+|+|+++|... ...|.+.+...+.++.+.. ++. ....|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3445555666666 6799999999999999999743 4467776665554432210 000 002689999 99
Q ss_pred EEEEEEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 123 VYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
+|+|++ ++|+||||||..++. +||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999995 899999999987776 8999999985
No 45
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.28 E-value=1e-10 Score=123.29 Aligned_cols=204 Identities=11% Similarity=0.064 Sum_probs=125.0
Q ss_pred eEEEEEEEEEEEeeecC-----------ceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe-cCcccCCCc
Q 008592 37 TRHYKFHIKMQNITRLC-----------QTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW-HGVRQLRSG 103 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~~~ 103 (560)
.+++.|.++......+| ..-..+++||+. .|+|+|++| ++++||.|... ....+|+ ||.......
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 46777888766554433 234579999985 599999999 99999999985 4688999 897665444
Q ss_pred CCCCCC-----CcCccccCCCCeEEEEEEEcccCcceeEeeccccccccc-------------eEeEEEeCCCCCCCCCC
Q 008592 104 WADGPA-----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRATL-------------YGPIIILPKQQASYPFP 165 (560)
Q Consensus 104 ~~DGv~-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~Gl-------------~G~liV~~~~~~~~~~~ 165 (560)
.||.+ .+.+..|.||++++..++. .+.|+||++++......|+ ...+-+........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 79964 2567889999999999998 5789999999864432221 111111111000000
Q ss_pred CCCcceeEEeeeccccChH-HHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeE
Q 008592 166 QPFEEVPIIFGEWWKADTE-TIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDEL 244 (560)
Q Consensus 166 ~~~~e~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~ 244 (560)
..+.+..|..+...... .....+... ..++|||+.++. ..+.+.++.|++++|+|+|. ..+
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~-------~~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~H 367 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLG-------DDPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQ 367 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEEC-------SSSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEE
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEe-------eEEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCc
Confidence 00000000000000000 000000000 036789987531 23468999999999999998 479
Q ss_pred EEEEcCCeEEEEEeCCCccC
Q 008592 245 FFSIANHTLTIVETDAVYAK 264 (560)
Q Consensus 245 ~~~i~gh~~~via~DG~~v~ 264 (560)
.|||+||.|+|++.||..+.
T Consensus 368 P~HLHGh~F~Vl~~~G~~~~ 387 (451)
T 2uxt_A 368 AFHIEGVMFQIRNVNGAMPF 387 (451)
T ss_dssp EEEETTCEEEEEEETTBCCC
T ss_pred CeEECCceEEEEeeCCcCCC
Confidence 99999999999999997653
No 46
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.27 E-value=1.4e-11 Score=125.23 Aligned_cols=100 Identities=22% Similarity=0.348 Sum_probs=81.5
Q ss_pred EEECCCC--CCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC--------CcCccccCCCCeEEEEEEE
Q 008592 59 VTVNGQF--PGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA--------YVTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 59 ~~~ng~~--pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~--------~~tq~~i~pG~~~~Y~~~~ 128 (560)
|+|||+. ..|.|++++||+|+++|.|.....+.+|+||...... .+|.. ......|.||++++|.|+.
T Consensus 198 ~~iNG~~~~~~~~l~v~~Ge~vri~l~N~g~~~HpfHlHGh~f~v~--~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~ 275 (343)
T 3cg8_A 198 MTINNRKPHTGPDFEATVGDRVEIVMITHGEYYHTFHMHGHRWADN--RTGILTGPDDPSRVIDNKITGPADSFGFQIIA 275 (343)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESS--SSSSCCSTTCCCCEESEEEECTTCEEEEEEET
T ss_pred ceecccCCCCCccEEeCCCCEEEEEEEcCCccccccEecCcEEEEe--ccCcccCCCCcccceeeEEeCCCCEEEEEEEE
Confidence 6899986 3689999999999999999999999999999865432 33321 1234569999999999996
Q ss_pred --cccCcceeEeecccccc-ccceEeEEEeCCCCC
Q 008592 129 --TGQRGTLFWHAHISWLR-ATLYGPIIILPKQQA 160 (560)
Q Consensus 129 --~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~~ 160 (560)
.+.+|+|+||||..... .||.|.|+|.+++..
T Consensus 276 ~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~~ 310 (343)
T 3cg8_A 276 GEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDGT 310 (343)
T ss_dssp TTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTSC
T ss_pred CCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCCC
Confidence 26799999999987655 899999999987654
No 47
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.24 E-value=2.1e-11 Score=130.40 Aligned_cols=96 Identities=17% Similarity=0.201 Sum_probs=75.7
Q ss_pred cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 52 LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 52 ~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
+++...+|++|+++++|+|++++||+|+++++|.+...-. +||+.+.. .|+ +..+.||++++|+|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4577889999999999999999999999999998753211 36665542 222 2679999999999997 89
Q ss_pred CcceeEeeccc-cc-cccceEeEEEeCCC
Q 008592 132 RGTLFWHAHIS-WL-RATLYGPIIILPKQ 158 (560)
Q Consensus 132 ~Gt~wYH~H~~-~~-~~Gl~G~liV~~~~ 158 (560)
+|+||||||.. +. -.||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 21 25999999999763
No 48
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.15 E-value=1.1e-10 Score=102.68 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=71.2
Q ss_pred EEEecCCCEEEEEEeeCCcCccC-CCceeecCcceEEE--------EeCC-CCCCCCCCCCCCCCCCCCccceeEeCCCC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAE-SHPLHLHGFNFFVV--------AQGF-GNFDPNKDPAKFNLVDPAERNTVGVPSGG 506 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~-~HP~HlHG~~F~Vl--------~~~~-g~~~~~~~~~~~~~~~p~~rDTv~vpp~g 506 (560)
.+.++.|++|+|++.|.+ .. .|.||+|+....+. ..+. ..+.+. -....++||..|.||+
T Consensus 36 ~i~v~~G~~V~~~~~N~~---~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pGe 105 (139)
T 2aan_A 36 ELTVSAGQTVTIRFKNNS---AVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGNE 105 (139)
T ss_dssp EEEECTTCEEEEEEECCC---SSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTTC
T ss_pred eEEECCCCEEEEEEEeCC---CCCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCCC
Confidence 478999999999999965 35 89999998653110 0000 011110 0123578999999999
Q ss_pred EEEEEEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 507 WVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 507 ~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
...|.|.+++||.|.||||+..|.+ ||+..|.|+
T Consensus 106 t~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 106 TVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp EEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred EEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 9999999999999999999999999 999999883
No 49
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.15 E-value=8.9e-11 Score=97.93 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=65.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe-c
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA-D 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a-d 515 (560)
.+.++.|++|+|+ |.. ...|++|+||..|... . |. + .+....++..+.||+...++|.+ +
T Consensus 20 ~i~v~~Gd~V~~~--N~~---~~~H~v~~~~~~~~~~--~-g~-~----------~~~~~~~~~~i~pG~~~~~~f~~~~ 80 (105)
T 3cvb_A 20 NVTVHPGDTVKWV--NNK---LPPHNILFDDKQVPGA--S-KE-L----------ADKLSHSQLMFSPGESYEITFSSDF 80 (105)
T ss_dssp EEEECTTEEEEEE--ECS---SCCEEEEECTTSSGGG--C-HH-H----------HHHHCEEEEECSTTCEEEEEECTTS
T ss_pred EEEEcCCCEEEEE--ECC---CCCCeEEEeCCCCCcc--c-cc-c----------cccccccccccCCCCeEEEEEecCC
Confidence 5789999999874 643 4799999999876431 0 00 0 00012578899999999999998 7
Q ss_pred CceeeEEEeechhhhhcccEEEEEEcC
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
.||.|.|||| .|...||+..|.|.+
T Consensus 81 ~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 81 PAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp CSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 9999999999 799999999999853
No 50
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.15 E-value=1.6e-10 Score=96.36 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=63.4
Q ss_pred CCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 62 NGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 62 ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+..|..+.|++++||+|++ .|..+..+++|+++. .||.....+..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 3455568999999999655 699888999999862 3565544556689999999888 479999999998
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999985
No 51
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.14 E-value=1.8e-09 Score=113.55 Aligned_cols=197 Identities=15% Similarity=0.200 Sum_probs=130.2
Q ss_pred eEEEEEEEEEEEeee------------cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCc
Q 008592 37 TRHYKFHIKMQNITR------------LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSG 103 (560)
Q Consensus 37 ~~~~~l~~~~~~~~~------------~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~ 103 (560)
.+++.|.++...... .|..-..+++||+. .|.|+|++| ++++||.|... ....+|++|.......
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~ 223 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA 223 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe
Confidence 467777776544332 12334578999986 599999999 99999999985 4689999998666544
Q ss_pred CCCCCCC-----cCccccCCCCeEEEEEEEcccCcceeEeecccccc----ccc--------------eEeEEEeCCC-C
Q 008592 104 WADGPAY-----VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR----ATL--------------YGPIIILPKQ-Q 159 (560)
Q Consensus 104 ~~DGv~~-----~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~----~Gl--------------~G~liV~~~~-~ 159 (560)
.||.+- +....|.||++++..+++ +++|.||++++..... .|| ....+++... .
T Consensus 224 -~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 224 -ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp -ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred -cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 799752 355679999999999997 5699999999853211 122 1222232111 1
Q ss_pred CCCCCCCC----------CcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEEEccCC
Q 008592 160 ASYPFPQP----------FEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLKVTPGK 229 (560)
Q Consensus 160 ~~~~~~~~----------~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~v~~g~ 229 (560)
...+++.. ..+..+.+.- . . .+..++|||+.+. . ....+.++.|+
T Consensus 302 ~~~~~p~~l~~~~~l~~~~~~r~~~l~~-----~-------~-------~g~~~~iNg~~~~---~---~~~~~~~~~g~ 356 (439)
T 2xu9_A 302 KPLPLPKALSPFPTLPAPVVTRRLVLTE-----D-------M-------MAARFFINGQVFD---H---RRVDLKGQAQT 356 (439)
T ss_dssp CCCCCCSCCCCCCCCCCCSEEEEEEEEE-----E-------G-------GGTEEEETTBCCC---T---TCCCEEECTTC
T ss_pred ccccCcccCCCcccCCCCCcceEEEEEe-----e-------c-------cCceEeECCEECC---C---CCCceecCCCC
Confidence 11111100 0001111110 0 0 0136889999753 1 22358899999
Q ss_pred EEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 230 TYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 230 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
+++|+|.|.+ ...+.|||+||.|+|++.+|...
T Consensus 357 ~~~~~~~N~~-~~~HP~HLHG~~F~Vl~~~g~~~ 389 (439)
T 2xu9_A 357 VEVWEVENQG-DMDHPFHLHVHPFQVLSVGGRPF 389 (439)
T ss_dssp EEEEEEEECS-SSCEEEEESSCCBEEEEETTEEC
T ss_pred EEEEEEEcCC-CCCCCceeCCCcEEEEeeCCCCC
Confidence 9999999997 45788999999999999999765
No 52
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=98.98 E-value=1.3e-09 Score=108.07 Aligned_cols=88 Identities=22% Similarity=0.321 Sum_probs=71.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
++++++.|++|++.+.|.. ..+|++|+||... ....|. +..+...|+||+..+++|.++
T Consensus 66 P~i~~~~Gd~v~v~~~N~~---~~~~~iH~HG~~~---~~~DG~---------------p~~~~~~i~PG~~~~y~f~~~ 124 (288)
T 3gdc_A 66 PTLWAREGDALRIHFTNAG---AHPHTIHFHGVHR---ATMDGT---------------PGIGAGSIAPGQSFTYEFDAT 124 (288)
T ss_dssp CEEEEETTCEEEEEEEECS---SSCBCCEESSCCC---GGGSCC---------------TTSTTCSBCTTCEEEEEEECC
T ss_pred CcEEEeCCCEEEEEEEeCC---CCcccEEeccccc---cccCCC---------------CCccceeECCCCEEEEEEEcC
Confidence 4689999999999999975 4799999999862 111110 112456799999999999999
Q ss_pred CceeeEEEeech---hhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHLE---VHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHil---~H~d~GMm~~~~V~~~~ 544 (560)
++|.|.||||.. .|...||+..+.|++..
T Consensus 125 ~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~ 156 (288)
T 3gdc_A 125 PFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKE 156 (288)
T ss_dssp SCEEEEEECCCSSHHHHHHTTCEEEEEEECSS
T ss_pred CCccEEEEecCcchHHHHhCcCeEEEEEeCCc
Confidence 999999999997 79999999999997754
No 53
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=98.97 E-value=2.5e-08 Score=106.66 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=130.0
Q ss_pred EEEEEEEEEEeeecCc-----eeEEEEECCCCC--------CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcC
Q 008592 39 HYKFHIKMQNITRLCQ-----TKSIVTVNGQFP--------GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGW 104 (560)
Q Consensus 39 ~~~l~~~~~~~~~~g~-----~~~~~~~ng~~p--------GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~ 104 (560)
++.|.++......++. ....+++||+.. .|+|+|++|+++++||.|... ....+|++|.......
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4556665544433332 234789999853 289999999999999999984 4678999987665543
Q ss_pred CCCCC----CcCccccCCCCeEEEEEEEcccCcceeEeecccc--c-----c-ccceEeEEEeCCCCCCCCCCCCCccee
Q 008592 105 ADGPA----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW--L-----R-ATLYGPIIILPKQQASYPFPQPFEEVP 172 (560)
Q Consensus 105 ~DGv~----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~--~-----~-~Gl~G~liV~~~~~~~~~~~~~~~e~~ 172 (560)
.||.+ .+....|.||++++..+++.+.+|+||.+++... . . .|+..+++.........+......+ .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-P 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-C
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-c
Confidence 79964 2345668999999999998555799999998531 1 1 2343344443321111010000000 0
Q ss_pred EEeeeccccChH--HHHH-------H-HHhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeeEEEcc
Q 008592 173 IIFGEWWKADTE--TIIN-------E-AMQTGGAPNISDAFTINGLPGPFYNC-------------A--AKDTFKLKVTP 227 (560)
Q Consensus 173 l~~~d~~~~~~~--~~~~-------~-~~~~~~~~~~~d~~lvNG~~~~~~~~-------------~--~~~~~~~~v~~ 227 (560)
..+.+....... .... . ...-. ....+..++|||+.+..-.. . ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~-~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQ-LGFSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECC-EEEETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEE-eeccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 000010000000 0000 0 00000 00011268899997531100 0 00235789999
Q ss_pred CCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCc
Q 008592 228 GKTYLLRMINAALNDELFFSIANHTLTIVETDAVY 262 (560)
Q Consensus 228 g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~ 262 (560)
|++++++++|......+.|||+||.|+|++.+|..
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~ 414 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSS 414 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCC
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCC
Confidence 99999999965445689999999999999999875
No 54
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=98.95 E-value=2.7e-08 Score=106.83 Aligned_cols=201 Identities=16% Similarity=0.122 Sum_probs=121.4
Q ss_pred eEEEEECCCCC---------CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCC----CcCccccCCCCe
Q 008592 56 KSIVTVNGQFP---------GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQS 121 (560)
Q Consensus 56 ~~~~~~ng~~p---------GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~ 121 (560)
...+++||+.. -|+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.||++
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 34789999853 189999999999999999985 4678999997666544 79964 235566999999
Q ss_pred EEEEEEEcccCcceeEeeccccc----cccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChH--HH--------H
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWL----RATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTE--TI--------I 187 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~--~~--------~ 187 (560)
++..+++.+.+|+||.+++.... ..|+..+++.........+..... + ...+.+....... .. .
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985557999999986421 134434444433221111100000 0 0000000000000 00 0
Q ss_pred H-HHHhcCCCCCCCceEEEcCcCCCCCCC-------------C--CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCC
Q 008592 188 N-EAMQTGGAPNISDAFTINGLPGPFYNC-------------A--AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANH 251 (560)
Q Consensus 188 ~-~~~~~~~~~~~~d~~lvNG~~~~~~~~-------------~--~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh 251 (560)
+ ..............++|||+.+..-.. . ......+.++.|++++++++| ...+.|||+||
T Consensus 348 ~~~~~l~~~~~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHGh 424 (521)
T 1v10_A 348 DINLNLRIGRNATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHGH 424 (521)
T ss_dssp SEEEECCEECCSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESSC
T ss_pred eEEEEEEEecCCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEccc
Confidence 0 000000000001257899987531100 0 012357899999999999999 45788999999
Q ss_pred eEEEEEeCCCc
Q 008592 252 TLTIVETDAVY 262 (560)
Q Consensus 252 ~~~via~DG~~ 262 (560)
.|+|++.+|..
T Consensus 425 ~F~Vl~~~~~~ 435 (521)
T 1v10_A 425 NFDVVRTPGSS 435 (521)
T ss_dssp CEEEEECTTCS
T ss_pred eEEEEecCCCC
Confidence 99999999875
No 55
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.93 E-value=2.4e-09 Score=89.37 Aligned_cols=84 Identities=15% Similarity=0.182 Sum_probs=61.5
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeEEEEEEEcccCcceeEeeccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS 142 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~ 142 (560)
.+.|++++||+|++ .|.....+++|+|+...+. .+|.. ..+...+.||++++|+|++++++|+|||||| .
T Consensus 19 P~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~-~ 92 (106)
T 2gim_A 19 PAKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCE-P 92 (106)
T ss_dssp SSEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECT-T
T ss_pred CCEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeC-C
Confidence 37999999998755 5887778999988764421 12210 0122458999999999975468999999999 2
Q ss_pred cccccceEeEEEeC
Q 008592 143 WLRATLYGPIIILP 156 (560)
Q Consensus 143 ~~~~Gl~G~liV~~ 156 (560)
...+||.|.|+|.+
T Consensus 93 H~~~GM~G~i~V~~ 106 (106)
T 2gim_A 93 HRGAGMVGKITVAG 106 (106)
T ss_dssp TGGGTCEEEEEECC
T ss_pred hhhcCcEEEEEEcC
Confidence 23479999999963
No 56
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=98.88 E-value=1.3e-10 Score=116.33 Aligned_cols=97 Identities=22% Similarity=0.190 Sum_probs=64.5
Q ss_pred eEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCc--CeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 56 KSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKY--NVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 56 ~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~--~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
-.+++|||+..+ |.|++++|++++++|.|.... .+++|+||.... .||+. .....|.||+++++.|++ ++
T Consensus 201 ~~~~~ING~~~~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~----~dG~~-~dtv~l~pger~~v~~~~-~~ 274 (306)
T 1sdd_A 201 SLMYTVNGYVNGTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLE----QNHHK-ISAITLVSATSTTANMTV-SP 274 (306)
T ss_dssp CEEECSSSCCSSCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCE----ETTEE-CSCCCEETTCCBC--------
T ss_pred CcceeeCCEecCCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEee----eCCEE-cceEEECCCcEEEEEEEc-CC
Confidence 457999999865 899999999999999999754 678999996543 47753 566789999999999997 78
Q ss_pred CcceeEeecccccc-ccceEeEEEeCCC
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
+|+||||||..... +||.|.|.|.+..
T Consensus 275 pG~~~~hch~~~H~~~GM~~~~~V~~~~ 302 (306)
T 1sdd_A 275 EGRWTIASLIPRHFQAGMQAYIDIKNCA 302 (306)
T ss_dssp -CCCCCBCCSTTTGGGTCBCCC------
T ss_pred CeEEEEEeCChHHHhcCCeEEEEEecCC
Confidence 99999999987655 8999999998653
No 57
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.86 E-value=5.6e-09 Score=87.05 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=62.6
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCC-CccceeEeCCCCEEEEEEEe-
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDP-AERNTVGVPSGGWVAIRFLA- 514 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p-~~rDTv~vpp~g~v~irf~a- 514 (560)
.+.++.|++|+|+ |.+ ...|.+|+|+..+.. ..|. ..+ ..+|++.+.||+...+.|.+
T Consensus 21 ~i~v~~Gd~V~~~--n~~---~~~H~~~~~~~~~~~---~~g~------------~~~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 21 KLTIKPGDTVEFL--NNK---VPPHNVVFDAALNPA---KSAD------------LAKSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCCCBEECSSSSTT---CCHH------------HHHHHCBCSCCCSTTCEEEEECCTT
T ss_pred EEEECCCCEEEEE--ECC---CCCceEEEeCCCCcc---cccc------------cchhccccceeeCCCCEEEEEEecC
Confidence 4789999999986 543 368999999865411 0000 000 01467889999999998888
Q ss_pred cCceeeEEEeechhhhhcccEEEEEEc
Q 008592 515 DNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 515 dnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
+.||.|.|||| .|.++||+..|.|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999985
No 58
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=98.84 E-value=5.1e-09 Score=115.62 Aligned_cols=101 Identities=16% Similarity=0.298 Sum_probs=83.8
Q ss_pred eeEEEEECCCC-CCcEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 55 TKSIVTVNGQF-PGPRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 55 ~~~~~~~ng~~-pGP~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
....++|||+. +.|+|++++|++++++|.|... ..+.+|+||....... .||. ......|.||++++++|.+ ++
T Consensus 225 ~~~~~~iNG~~~~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~-~d~~-~~d~v~l~pg~r~~v~~~~-~~ 301 (647)
T 1sdd_B 225 SHEFHAINGMIYNLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENG-TQQH-QLGVWPLLPGSFKTLEMKA-SK 301 (647)
T ss_dssp CCEEEEETTBSSCCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECS-SSCE-EESSEEECTTEEEEEEEEC-CS
T ss_pred cCceeccCCEecCCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEec-CCCc-ccceEEECCCeEEEEEEEe-cc
Confidence 34678999997 5799999999999999999874 4799999998765442 4653 3456789999999999997 67
Q ss_pred CcceeEeecccccc-ccceEeEEEeCCC
Q 008592 132 RGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 132 ~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
+|+|+||||..... .||.|.++|.++.
T Consensus 302 pG~w~~hch~~~h~~~Gm~~~~~V~~~~ 329 (647)
T 1sdd_B 302 PGWWLLDTEVGEIQRAGMQTPFLIVDRE 329 (647)
T ss_dssp SEEEEEECCCHHHHTTTCEEEEEEECTT
T ss_pred ceEeecccCcccccccccccceeeeccc
Confidence 89999999986554 8999999998653
No 59
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.81 E-value=1.7e-08 Score=88.52 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=65.8
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCc-CeeEEecCcccC--------C--CcC-CCCCC----C--cCccccCCCCeEEEE
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKY-NVTIHWHGVRQL--------R--SGW-ADGPA----Y--VTQCPIQTGQSYVYN 125 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~-~~~iH~HG~~~~--------~--~~~-~DGv~----~--~tq~~i~pG~~~~Y~ 125 (560)
+|--+.|+|++||+|+++|+|.... .++++.|+.... . ..+ .|-+| . -....|.||+++++.
T Consensus 31 ~F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~ 110 (139)
T 2aan_A 31 AFDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVT 110 (139)
T ss_dssp SBSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEE
T ss_pred EEcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEE
Confidence 3444799999999999999999877 888888874310 0 000 01011 0 011337999999999
Q ss_pred EEEcccCcceeEeeccccccccceEeEEEe
Q 008592 126 FTVTGQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
|++ +++|+|+||||..+...||.|.|+|+
T Consensus 111 f~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 111 FTA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EEC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 997 68999999999876545999999984
No 60
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=98.80 E-value=2.6e-08 Score=99.09 Aligned_cols=100 Identities=18% Similarity=0.249 Sum_probs=77.2
Q ss_pred EEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC-------CcCccccCCCCeEEEEEEEc
Q 008592 59 VTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA-------YVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 59 ~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~-------~~tq~~i~pG~~~~Y~~~~~ 129 (560)
|.+||+.-+ |.|.++.||+|+++|.|.....+++|+||....... .|+.. ...-..|.||+++++.+...
T Consensus 179 ~~~Ng~~~~~~p~l~v~~Ge~Vr~~liN~~~~~HpfHlHGh~F~v~~-~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~ 257 (299)
T 3t9w_A 179 MMINNRAHHDAPTFEANLGERVEWIAIGHGSNFHTFHLHGHRWLDNR-TGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAG 257 (299)
T ss_dssp TEETTCCTTCCCEEEEETTCEEEEEEEEESSCCCEEEETTCCEESSS-SSSCCSTTCCCCEESEEECCTTCEEEEEEETT
T ss_pred eeecCccccccccceecCCCEEEEEEEeccccceeeeEecceEEEEe-cccccCCcCCCCceeeEEeCCceeEEEEEEEe
Confidence 567887543 899999999999999999999999999997653321 22211 12224589999999988642
Q ss_pred --ccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 130 --GQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 130 --~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
+.+|+|+||||..... .||.|.|.|++.+.
T Consensus 258 ~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~~ 290 (299)
T 3t9w_A 258 EGVGPGMWMYHCHVQNHSDMGMAGMFLVRNADG 290 (299)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eCCCCeeEEEEcCCHHHHhcCCeEEEEEECCCC
Confidence 4589999999987655 89999999998764
No 61
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=98.77 E-value=5.1e-08 Score=97.69 Aligned_cols=100 Identities=20% Similarity=0.296 Sum_probs=78.1
Q ss_pred EEECCCCC--CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC-------cCccccCCCCeEEEEEEEc
Q 008592 59 VTVNGQFP--GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY-------VTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 59 ~~~ng~~p--GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~-------~tq~~i~pG~~~~Y~~~~~ 129 (560)
|++||+.- .|.|.++.||+|+++|.|.....+.+|+||....... .||... .....|.||+++++.+...
T Consensus 163 ~t~Ng~~~~~~~~l~v~~Ge~vr~~liN~g~~~hpfHlHGh~F~v~~-~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~ 241 (313)
T 3tas_A 163 MTINNRPAHTGPDFEATVGDRVEFVMITHGEYYHTFHLHGHRWADNR-TGMLTGPDDPSQVIDNKICGPADSFGFQVIAG 241 (313)
T ss_dssp TEETTCCTTCCCCEEEETTCEEEEEEEEESSCCEEEEETTCCEESST-TSSCCSTTCCCCEESEEEECTTCEEEEEEETT
T ss_pred hhcccCCcccccccccccCCEEEEEEecccccceeeeecCCeeEEEE-ECCccCCCCCCeeeeEEEeCCCcceEEEEEec
Confidence 57787643 4889999999999999999988999999997654332 444322 1234589999999998752
Q ss_pred --ccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 130 --GQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 130 --~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
+.+|+|.||||..... .||.|.|+|++++.
T Consensus 242 ~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 242 EGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp TTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred cCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 4589999999986554 89999999998764
No 62
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=98.75 E-value=1.9e-07 Score=99.18 Aligned_cols=205 Identities=15% Similarity=0.125 Sum_probs=119.8
Q ss_pred eEEEEECCCC---------CCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCe
Q 008592 56 KSIVTVNGQF---------PGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQS 121 (560)
Q Consensus 56 ~~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~ 121 (560)
...+++||+- +-|.|+|++|+++++||.|.. .....+|++|....... .||.+ .+....|.||++
T Consensus 168 ~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 246 (495)
T 3t6v_A 168 ADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQR 246 (495)
T ss_dssp CSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCceE
Confidence 4579999973 347999999999999999986 45678999997665544 79864 234566999999
Q ss_pred EEEEEEEcccCcceeEeeccccc----cccceEeEEEeCCCCCCCCCCCCCc-ceeEEeeeccccChHHH-HHHHHhcCC
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWL----RATLYGPIIILPKQQASYPFPQPFE-EVPIIFGEWWKADTETI-INEAMQTGG 195 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~-~~~~~~~~~ 195 (560)
++..+++.+..|.||..+..... ..|...+++.........+...... .. ..+.+......... .......+.
T Consensus 247 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~ 325 (495)
T 3t6v_A 247 YSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHT-KCLIETDLHPLSRNGVPGNPHQGG 325 (495)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCS-SBCCGGGCCBSSCCCCSSCSSTTC
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCc-cccccccccccccccCCCccCCCC
Confidence 99999985556999999875321 1233334444432211111100000 00 00001000000000 000000000
Q ss_pred --------CCCCCceEEEcCcCCCCCCC-----------C----CCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCe
Q 008592 196 --------APNISDAFTINGLPGPFYNC-----------A----AKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHT 252 (560)
Q Consensus 196 --------~~~~~d~~lvNG~~~~~~~~-----------~----~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~ 252 (560)
....+..++|||+.+..-.. + .....++.++.|++++|.|.|......+.||++||.
T Consensus 326 ~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLHGh~ 405 (495)
T 3t6v_A 326 ADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLHGHD 405 (495)
T ss_dssp SSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEETTCC
T ss_pred CcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeecCCc
Confidence 00011357899986421100 0 011346899999999999984344567899999999
Q ss_pred EEEEEeCCCc
Q 008592 253 LTIVETDAVY 262 (560)
Q Consensus 253 ~~via~DG~~ 262 (560)
|+|++.+|..
T Consensus 406 F~vl~~~g~~ 415 (495)
T 3t6v_A 406 FAVSESASNS 415 (495)
T ss_dssp EEEEECTTCC
T ss_pred EEEEecCCCC
Confidence 9999988753
No 63
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.74 E-value=2e-08 Score=87.05 Aligned_cols=78 Identities=13% Similarity=0.220 Sum_probs=56.3
Q ss_pred CCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccc
Q 008592 63 GQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS 142 (560)
Q Consensus 63 g~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~ 142 (560)
..|-.+.|++++||+|++ .|....++++++.... +|........+.||++++|+| +++|+|||||-.|
T Consensus 55 ~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~H 122 (132)
T 3c75_A 55 MKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPH 122 (132)
T ss_dssp TEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSC
T ss_pred eEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCCC
Confidence 344447999999999865 5888777777765421 122122223578999999888 4799999999775
Q ss_pred cccccceEeEEEe
Q 008592 143 WLRATLYGPIIIL 155 (560)
Q Consensus 143 ~~~~Gl~G~liV~ 155 (560)
. ||.|.|+|+
T Consensus 123 ~---gM~G~I~V~ 132 (132)
T 3c75_A 123 P---FMRGKVIVE 132 (132)
T ss_dssp T---TCEEEEEEC
T ss_pred c---CCEEEEEEC
Confidence 4 999999984
No 64
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=98.72 E-value=1e-07 Score=100.26 Aligned_cols=194 Identities=14% Similarity=0.076 Sum_probs=123.7
Q ss_pred EEEEEEEEEEEeee-------------cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe--cC---cc
Q 008592 38 RHYKFHIKMQNITR-------------LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW--HG---VR 98 (560)
Q Consensus 38 ~~~~l~~~~~~~~~-------------~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~--HG---~~ 98 (560)
+++.|.++...... .|..-..+++||+. .|+|+|++| ++++||.|... ....+|+ +| ..
T Consensus 138 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~ 215 (448)
T 3aw5_A 138 NDLPLVISDRRFIGGAPVYNPTPMEMIAGFLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVP 215 (448)
T ss_dssp TEEEEEEEEEEEETTEEECCCCHHHHHHCCCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEEC
T ss_pred ceEEEEEEeeccCCCcccccccccccccCccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCcc
Confidence 56777776554432 12234578999985 599999999 99999999984 5788999 77 44
Q ss_pred cCCCcCCCCCC-----CcCccccCCCCeEEEEEEEcccCcceeEeecccccccc--------------ceEeEEEe--CC
Q 008592 99 QLRSGWADGPA-----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT--------------LYGPIIIL--PK 157 (560)
Q Consensus 99 ~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G--------------l~G~liV~--~~ 157 (560)
..... .||.+ .+....|.||++++..++. . .+.||..++......| ....++++ +.
T Consensus 216 ~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (448)
T 3aw5_A 216 MRLIA-VDQGFLARPIEVRALFLAPAERAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGK 292 (448)
T ss_dssp EEEEE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEE
T ss_pred EEEEE-eCCCccCCceEeceEEECCcceEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCC
Confidence 43332 78864 2345668999999999987 3 4789998875321100 11222222 11
Q ss_pred CCC--CCCC---C----CCCcceeEEeeeccccChHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCceeeEE-Ecc
Q 008592 158 QQA--SYPF---P----QPFEEVPIIFGEWWKADTETIINEAMQTGGAPNISDAFTINGLPGPFYNCAAKDTFKLK-VTP 227 (560)
Q Consensus 158 ~~~--~~~~---~----~~~~e~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~lvNG~~~~~~~~~~~~~~~~~-v~~ 227 (560)
... +..+ + ....+..+.|.- + ...++|||+.+.. ..+.+. ++.
T Consensus 293 ~~~~~p~~L~~lp~~~~~~~~~~~~~l~~----------------~-----~~~~~iNg~~~~~------~~p~~~~~~~ 345 (448)
T 3aw5_A 293 GEAVPVEALSDPPPEPPKPTRTRRFALSL----------------S-----GMQWTINGMFWNA------SNPLFEHVSV 345 (448)
T ss_dssp CCCCCCCCCSCCCCCCCCCSEEEEEEEEE----------------E-----TTEEEETTBCCCT------TCTTCCCEEE
T ss_pred CCCCCccccCCCCCCCCCCCceEEEEEeC----------------C-----CceeeECCCcCCC------CCCceeccCC
Confidence 110 0000 0 001112222210 0 1248999997531 223456 899
Q ss_pred CCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCcc
Q 008592 228 GKTYLLRMINAALNDELFFSIANHTLTIVETDAVYA 263 (560)
Q Consensus 228 g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v 263 (560)
|++++|+|.|.+....+.|||+||.|+|++.+|...
T Consensus 346 g~~v~~~i~N~~~~~~HP~HLHG~~F~Vl~~~G~~~ 381 (448)
T 3aw5_A 346 EGVELWEIVNDKASMPHPMHLHGFPMWIIERKDSPR 381 (448)
T ss_dssp CEEEEEEEEECSSSCCEEEEESSSCBEEEEEESCCH
T ss_pred CCeEEEEEEcCCCCCCcCEEECCceEEEEEecCCCc
Confidence 999999999998556799999999999999988653
No 65
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.71 E-value=3.9e-08 Score=86.34 Aligned_cols=99 Identities=19% Similarity=0.193 Sum_probs=71.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCc--ceEEEE-eC--CC---CCCCCCCCCCCCCCCCCccceeEeCCCCEE
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGF--NFFVVA-QG--FG---NFDPNKDPAKFNLVDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~--~F~Vl~-~~--~g---~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v 508 (560)
.+.++.|++|+|++.|.+. +...|.||++.. .|.-+. .+ .+ .|-+.. -....+++|..|.||...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4789999999999999321 247999999852 221100 00 00 010000 012346889999999999
Q ss_pred EEEEEecCceeeEEEeechhhhhcccEEEEEEcC
Q 008592 509 AIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 509 ~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
.+.|.++.||.|.|||++..|...||...|.|.+
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 9999999999999999999999999999999863
No 66
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=98.70 E-value=4e-07 Score=96.19 Aligned_cols=218 Identities=12% Similarity=0.083 Sum_probs=128.8
Q ss_pred EEEEEEEEEEEeeecCc--------------eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEe-cCcccCC
Q 008592 38 RHYKFHIKMQNITRLCQ--------------TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHW-HGVRQLR 101 (560)
Q Consensus 38 ~~~~l~~~~~~~~~~g~--------------~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~-HG~~~~~ 101 (560)
.++.|.++......+|. .-..+++||+. .|.+.+ +|+++++||.|... ....+++ +|.....
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 36667776655544331 22478999985 488876 67899999999874 5677888 6765443
Q ss_pred CcCCCCCC-----CcCccccCCCCeEEEEEEEcccCcceeEeecccccc-------ccceEeEEEeC-----CCCCCC--
Q 008592 102 SGWADGPA-----YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-------ATLYGPIIILP-----KQQASY-- 162 (560)
Q Consensus 102 ~~~~DGv~-----~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~-----~~~~~~-- 162 (560)
.. .||.+ .++...|.|||+++..+++ .+.++|+.-+...... ..-.-.+-|.+ ....+.
T Consensus 229 Ia-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L 306 (488)
T 3od3_A 229 IA-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL 306 (488)
T ss_dssp EE-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCC
T ss_pred EE-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCccc
Confidence 33 78853 2456779999999999998 5677888766532211 01011222221 111010
Q ss_pred -CC---CC----CCcceeEEeeec-cccChHHHHHHHH----h------------cCCC--------CCCCceEEEcCcC
Q 008592 163 -PF---PQ----PFEEVPIIFGEW-WKADTETIINEAM----Q------------TGGA--------PNISDAFTINGLP 209 (560)
Q Consensus 163 -~~---~~----~~~e~~l~~~d~-~~~~~~~~~~~~~----~------------~~~~--------~~~~d~~lvNG~~ 209 (560)
++ +. ..+++.+.+... .......+...+- . .|.. ......++|||+.
T Consensus 307 ~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~ 386 (488)
T 3od3_A 307 SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQA 386 (488)
T ss_dssp CCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBC
T ss_pred ccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCee
Confidence 01 11 112333333210 0000000111000 0 0000 0011247999997
Q ss_pred CCCCCCCCCceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEEEEEeCCCccCC
Q 008592 210 GPFYNCAAKDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLTIVETDAVYAKS 265 (560)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~v~p 265 (560)
++. ..+.++++.|+++||+|+|.+....+.|||+||.|+|++.||....+
T Consensus 387 ~~~------~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~ 436 (488)
T 3od3_A 387 FDM------NKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAA 436 (488)
T ss_dssp CCT------TCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCG
T ss_pred CCC------CCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCcccc
Confidence 531 34568999999999999999976789999999999999999987654
No 67
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=98.70 E-value=5.3e-07 Score=95.84 Aligned_cols=205 Identities=16% Similarity=0.102 Sum_probs=118.4
Q ss_pred eEEEEECCCC--------CCcEEEEecCCEEEEEEEeCC-CcCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeE
Q 008592 56 KSIVTVNGQF--------PGPRIIAREGDRLLIRVINNV-KYNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSY 122 (560)
Q Consensus 56 ~~~~~~ng~~--------pGP~i~~~~Gd~v~v~~~N~l-~~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~ 122 (560)
...++|||+. +-|.|+|++|+++++||.|.. .....+|++|....... .||.+ .+....|.||+++
T Consensus 166 ~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR~ 244 (499)
T 3pxl_A 166 ADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQRY 244 (499)
T ss_dssp CSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCEE
T ss_pred CcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcEE
Confidence 4578999973 347999999999999999987 45678999998766554 79864 2345669999999
Q ss_pred EEEEEEcccCcceeEeeccccc---c-ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccChHHH-HHHHHhcCC--
Q 008592 123 VYNFTVTGQRGTLFWHAHISWL---R-ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKADTETI-INEAMQTGG-- 195 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~~~~---~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~-~~~~~~~~~-- 195 (560)
+..+++.+..|.||-.+..... . .+..-+++.........+........ ..+.+......... .......+.
T Consensus 245 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~-~~~~~~~L~p~~~~~~p~~~~~~~~d 323 (499)
T 3pxl_A 245 SFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSV-KPLNEVDLHPLVSTPVPGAPSSGGVD 323 (499)
T ss_dssp EEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCS-SBCCGGGCCBSSCCCCSSCSSTTCSS
T ss_pred EEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCC-cccccccccccccccCCCcccCCCCc
Confidence 9999985556999998874321 1 22222333333221111110000000 00011000000000 000000000
Q ss_pred ------CCCCCceEEEcCcCCCCCC---------CC------CCceeeEEEccCCEEEEEEEecC--CCCeEEEEEcCCe
Q 008592 196 ------APNISDAFTINGLPGPFYN---------CA------AKDTFKLKVTPGKTYLLRMINAA--LNDELFFSIANHT 252 (560)
Q Consensus 196 ------~~~~~d~~lvNG~~~~~~~---------~~------~~~~~~~~v~~g~~~rlRliN~~--~~~~~~~~i~gh~ 252 (560)
....+..++|||+.+.... .. ......+.++.|++++|.|.|.+ ....+.||++||.
T Consensus 324 ~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~ 403 (499)
T 3pxl_A 324 KAINMAFNFNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHT 403 (499)
T ss_dssp EEEECCEEECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCC
T ss_pred EEEEEEEEecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCc
Confidence 0001225789998642100 00 01234689999999999999532 2346899999999
Q ss_pred EEEEEeCCCc
Q 008592 253 LTIVETDAVY 262 (560)
Q Consensus 253 ~~via~DG~~ 262 (560)
|+|++.+|..
T Consensus 404 F~Vl~~~g~~ 413 (499)
T 3pxl_A 404 FAVVRSAGST 413 (499)
T ss_dssp EEEEECTTCC
T ss_pred EEEEeccCCc
Confidence 9999987743
No 68
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=98.69 E-value=6.4e-08 Score=97.11 Aligned_cols=121 Identities=18% Similarity=0.162 Sum_probs=89.6
Q ss_pred ceEEEEEEEEEEEeeec------C---ceeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC
Q 008592 36 ITRHYKFHIKMQNITRL------C---QTKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW 104 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~~------g---~~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~ 104 (560)
..++|.|.++.-..... + .....++|||+.-. +.|++++|++++++|.|.....+.+|+||.......
T Consensus 135 ~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~~~~~~l~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~- 213 (318)
T 3g5w_A 135 VTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSFPETQPIRVKKGDVIRLRLIGAGDHVHAIHTHGHISQIAF- 213 (318)
T ss_dssp CCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCBTSSCCEEECTTCEEEEEEEECSSSCEEEEETTSCEEEEE-
T ss_pred ccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCCCCCccEEeCCCCEEEEEEEeCCCceEEEEECCcEEEEEe-
Confidence 35777777765432211 1 12357999998532 459999999999999999888899999998765543
Q ss_pred CCCCCC-----cCccccCCCCeEEEEEEEcccCcceeEeecccccc-------ccceEeEEEeCCC
Q 008592 105 ADGPAY-----VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-------ATLYGPIIILPKQ 158 (560)
Q Consensus 105 ~DGv~~-----~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~ 158 (560)
.||.+. .....|.||++++..|++ +++|.|++|||..... .||.+.|-+++..
T Consensus 214 ~dG~~~~~p~~~dtv~l~pger~~v~~~a-~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 214 KDGFPLDKPIKGDTVLIGPGERYDVILNM-DNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp ETTEEEEEEEEESEEEECTTCEEEEEEEC-CSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred cCCcccCCCccccEEEECCCCEEEEEEEC-CCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 677542 234568999999999997 7899999999975432 4788888887654
No 69
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=98.68 E-value=2.2e-08 Score=105.73 Aligned_cols=96 Identities=15% Similarity=0.169 Sum_probs=77.5
Q ss_pred EEEECCCCCC---cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCC--CCCC------C-cCccccCCCCeEEEE
Q 008592 58 IVTVNGQFPG---PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWA--DGPA------Y-VTQCPIQTGQSYVYN 125 (560)
Q Consensus 58 ~~~~ng~~pG---P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~--DGv~------~-~tq~~i~pG~~~~Y~ 125 (560)
.|+|||+..+ |.+++++|++++++|.|.....+.+|+||....... . +|.+ + -.-..+.||++.+.+
T Consensus 372 ~~~iNG~~~~~~~~~~~~~~G~~v~w~l~N~~~~~Hp~HlHG~~F~vl~-~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~ 450 (481)
T 3zx1_A 372 MFLINRKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELIS-SKLNGKVQKAEFRALRDTINVRPNEELRLR 450 (481)
T ss_dssp TEEETTBCCCTTCCCEEEETTCCEEEEEEECSSSCEEEEETTCCEEEEE-EEETTEEEECSSCCEESEEEECTTCEEEEE
T ss_pred eeEECCEeCCCCCceEEeCCCCEEEEEEEcCCCCceeEEEeccEEEEEE-ecccCCCCCcccCcccceEEECCCCEEEEE
Confidence 4999999877 679999999999999998889999999998654321 1 2311 0 011348999999999
Q ss_pred EEEcccCcceeEeecccccc-ccceEeEEEe
Q 008592 126 FTVTGQRGTLFWHAHISWLR-ATLYGPIIIL 155 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~ 155 (560)
|.. +.+|.|.||||..... .||.+.|.|+
T Consensus 451 ~~~-d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 451 MKQ-DFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp ECC-CSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred EEc-CCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 997 8899999999987655 8999999997
No 70
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.66 E-value=7.4e-08 Score=79.25 Aligned_cols=79 Identities=13% Similarity=0.072 Sum_probs=62.7
Q ss_pred CCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 62 NGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 62 ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
|..|-...|+++.||+|++.++|.....+++...+.... ..+.||++.+|.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 334444689999999999999999877777776655432 346899999999996 899999999975
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
|. ..||.|.|+|+
T Consensus 88 H~-~~gM~G~i~Ve 100 (100)
T 4hci_A 88 HL-LKGMEGKVIVK 100 (100)
T ss_dssp TG-GGTCEEEEEEC
T ss_pred cc-CCCCEEEEEEC
Confidence 32 26999999995
No 71
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=98.66 E-value=5.2e-08 Score=98.78 Aligned_cols=86 Identities=23% Similarity=0.355 Sum_probs=68.1
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+++.++.|++|+|.+.|... +...|.+|+||+.+. .+ + + .+..|+||+..+++|+++
T Consensus 65 P~i~v~~Gd~v~v~~~N~~~-~~~~h~~~~h~~~~~---~~-~---------------~---~~~~i~pG~~~~y~f~~~ 121 (336)
T 1oe1_A 65 PTLVVHEGDYVQLTLVNPAT-NAMPHNVDFHGATGA---LG-G---------------A---KLTNVNPGEQATLRFKAD 121 (336)
T ss_dssp CCEEEETTCEEEEEEEECTT-CCSCBCCEETTSCSG---GG-G---------------G---GGCCBCTTEEEEEEEECC
T ss_pred CeEEEcCCCEEEEEEEcCCC-CCccccceECCCCCC---CC-C---------------c---ceEEeCCCCEEEEEEECC
Confidence 35889999999999999631 236899999997531 00 1 0 012499999999999999
Q ss_pred CceeeEEEeec----hhhhhcccEEEEEEcCCC
Q 008592 516 NPGVWFMHCHL----EVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 516 npG~w~~HCHi----l~H~d~GMm~~~~V~~~~ 544 (560)
++|.|.||||. .+|...||...+.|.+..
T Consensus 122 ~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~ 154 (336)
T 1oe1_A 122 RSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRD 154 (336)
T ss_dssp SCEEEEEECCCTTCHHHHHHTTCEEEEEEECTT
T ss_pred CCeEEEEecCCCCchhHHHhCCCeEEEEEecCc
Confidence 99999999997 489999999999998654
No 72
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=98.65 E-value=1.3e-06 Score=93.82 Aligned_cols=202 Identities=10% Similarity=0.088 Sum_probs=118.0
Q ss_pred eEEEEECCCCCCcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeEEEEEEEcc
Q 008592 56 KSIVTVNGQFPGPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSYVYNFTVTG 130 (560)
Q Consensus 56 ~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~~Y~~~~~~ 130 (560)
...+++||+. .|+|+|++|+++++||.|... ....+|++|....... .||.+ .+....|.||++++..+++.+
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~~ 244 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTKN 244 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCS
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcCC
Confidence 3478999985 599999999999999999974 5678899887665544 78864 234566999999999998743
Q ss_pred c-CcceeEeecccccc-------ccceEeEEEeCCCCCCCCCCCCCcceeEEeeeccccC----------hHHHHHHHHh
Q 008592 131 Q-RGTLFWHAHISWLR-------ATLYGPIIILPKQQASYPFPQPFEEVPIIFGEWWKAD----------TETIINEAMQ 192 (560)
Q Consensus 131 ~-~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~----------~~~~~~~~~~ 192 (560)
+ .|.||......... ..+.+..|++-......+-+....+....+.|..... ...+... ..
T Consensus 245 ~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~-~~ 323 (534)
T 1zpu_A 245 DTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVD-VV 323 (534)
T ss_dssp CSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEE-EE
T ss_pred CCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEE-EE
Confidence 3 57899998754321 1122223333211111100000000000000000000 0000000 00
Q ss_pred cCCCCCCCceEEEcCcCCCCCC--------------CCC----CceeeEEEccCCEEEEEEEecCCCCeEEEEEcCCeEE
Q 008592 193 TGGAPNISDAFTINGLPGPFYN--------------CAA----KDTFKLKVTPGKTYLLRMINAALNDELFFSIANHTLT 254 (560)
Q Consensus 193 ~~~~~~~~d~~lvNG~~~~~~~--------------~~~----~~~~~~~v~~g~~~rlRliN~~~~~~~~~~i~gh~~~ 254 (560)
..........++|||+.+..-. .+. .....+.++.|++++|.|.|.+ ...+.|||+||.|+
T Consensus 324 ~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~-~~~HP~HLHGh~F~ 402 (534)
T 1zpu_A 324 MDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQD-TGTHPFHLHGHAFQ 402 (534)
T ss_dssp EEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECS-SSCEEEEETTCCEE
T ss_pred eeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCC-CCCCCeEecCCceE
Confidence 0000011235789998642100 000 0134688999999999999987 45789999999999
Q ss_pred EEEeCCC
Q 008592 255 IVETDAV 261 (560)
Q Consensus 255 via~DG~ 261 (560)
|++.++.
T Consensus 403 Vl~~~~~ 409 (534)
T 1zpu_A 403 TIQRDRT 409 (534)
T ss_dssp EEEECCC
T ss_pred EEeecCC
Confidence 9999875
No 73
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.62 E-value=1.2e-07 Score=77.69 Aligned_cols=80 Identities=14% Similarity=0.205 Sum_probs=59.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+| .|.+ ...|.+|+|+..+- ..++. ...++|++.+.||+...+.| +.
T Consensus 19 ~i~v~~G~~V~~--~n~~---~~~H~~~~~~~~~p------~~~~~----------~~~~~~~~~~~pG~~~~~tf--~~ 75 (98)
T 2plt_A 19 TLTIKSGETVNF--VNNA---GFPHNIVFDEDAIP------SGVNA----------DAISRDDYLNAPGETYSVKL--TA 75 (98)
T ss_dssp EEEECTTCEEEE--EECS---SCCEEEEECGGGSC------TTCCH----------HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCC------Ccccc----------ccccccceecCCCCEEEEEe--CC
Confidence 478999999998 4543 36899999975320 00000 01246889999999888765 58
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||| .|.+.||...+.|+
T Consensus 76 ~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 76 AGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp CEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CeEEEEEcC--CccccCCeEEEEEC
Confidence 999999999 79999999999883
No 74
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=98.60 E-value=2.7e-06 Score=91.95 Aligned_cols=85 Identities=15% Similarity=0.182 Sum_probs=68.2
Q ss_pred eEEEEECCCCC--------CcEEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCCC----CcCccccCCCCeE
Q 008592 56 KSIVTVNGQFP--------GPRIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGPA----YVTQCPIQTGQSY 122 (560)
Q Consensus 56 ~~~~~~ng~~p--------GP~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv~----~~tq~~i~pG~~~ 122 (560)
...++|||+.. -|+|.|++|+++++||.|... ....+|++|....... .||.+ .+....|.||+++
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 34689999973 379999999999999999985 4678999997665544 78875 2355679999999
Q ss_pred EEEEEEcccCcceeEeecc
Q 008592 123 VYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 123 ~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+..+++.+..|.||.....
T Consensus 274 dvlv~~~~~~g~y~i~a~~ 292 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTF 292 (559)
T ss_dssp EEEEECCSCSSEEEEEEEC
T ss_pred EEEEECCCCCCcEEEEEEe
Confidence 9999985557899999876
No 75
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.60 E-value=1.9e-07 Score=76.48 Aligned_cols=78 Identities=17% Similarity=0.241 Sum_probs=59.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCc-cceeEeCCCCEEEEEEEec
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE-RNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ad 515 (560)
.+.++.|++|+|+ |.+ ...|.+|+++..+- +. ..+.| .|++.+.||+...+.| +
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 20 TVTIKAGEEVKWV--NNK---LSPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--C
Confidence 4789999999987 532 36899999874321 00 00112 5688899999888766 8
Q ss_pred CceeeEEEeechhhhhcccEEEEEEc
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.||.|.|||| .|.+.||...+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999883
No 76
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.57 E-value=7.7e-08 Score=78.80 Aligned_cols=80 Identities=15% Similarity=0.220 Sum_probs=58.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCC-CCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADG-PAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DG-v~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
+.|++++||+|+ +.|.....+++|+|+...+.. .|. ....+...+.||++++++|. ++|+|+|||+.| ..+
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p~~--~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H-~~~ 89 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIPSG--VNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH-QGA 89 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSCTT--CCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-GGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCCCc--cccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-ccc
Confidence 789999999876 579887899999998643211 110 00011235789999999884 699999999932 346
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 90 gM~G~i~V~ 98 (98)
T 2plt_A 90 GMVGKIIVQ 98 (98)
T ss_dssp TCEEEEEEC
T ss_pred CCeEEEEEC
Confidence 999999984
No 77
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=98.55 E-value=1e-07 Score=96.50 Aligned_cols=85 Identities=20% Similarity=0.277 Sum_probs=66.4
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+.++++.|++|+|.+.|... +-..|.+|+|+... . .+ . +.. + .|+||+..+++|+++
T Consensus 64 P~i~~~~Gd~v~v~~~N~~~-~~h~Hg~~~~~~~~----~-~~-------~-------~~~--~-~i~PG~~~~y~f~~~ 120 (333)
T 1mzy_A 64 PLMIVHEGDYVELTLINPPE-NTMPHNIDFHAATG----A-LG-------G-------GGL--T-LINPGEKVVLRFKAT 120 (333)
T ss_dssp CEEEEETTCEEEEEEEECTT-CCSCBCCEETTSCS----G-GG-------G-------GGG--C-CBCTTEEEEEEEECC
T ss_pred CcEEecCCCEEEEEEEECCC-CcccccceecCCCC----C-CC-------C-------Cce--e-EeCCCCEEEEEEECC
Confidence 46899999999999999641 23578888887531 0 00 0 011 2 489999999999999
Q ss_pred CceeeEEEeech-----hhhhcccEEEEEEcCC
Q 008592 516 NPGVWFMHCHLE-----VHTSWGLKMAWIVNDG 543 (560)
Q Consensus 516 npG~w~~HCHil-----~H~d~GMm~~~~V~~~ 543 (560)
++|.|.||||.. +|...||+..+.|++.
T Consensus 121 ~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~ 153 (333)
T 1mzy_A 121 RAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPR 153 (333)
T ss_dssp SCEEEEEECCCSTTHHHHHHHTTCEEEEEEECT
T ss_pred CCEEEEEeecCCcccchhhhhCCCEEEEEEccC
Confidence 999999999996 7999999999999764
No 78
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.54 E-value=3.8e-07 Score=79.94 Aligned_cols=91 Identities=14% Similarity=0.169 Sum_probs=64.5
Q ss_pred CCCcEEEEecCCEEEEEEEe--CCCcCeeEEecCcc------------cCCC-cC---CCCCCC-cCccccCCCCeEEEE
Q 008592 65 FPGPRIIAREGDRLLIRVIN--NVKYNVTIHWHGVR------------QLRS-GW---ADGPAY-VTQCPIQTGQSYVYN 125 (560)
Q Consensus 65 ~pGP~i~~~~Gd~v~v~~~N--~l~~~~~iH~HG~~------------~~~~-~~---~DGv~~-~tq~~i~pG~~~~Y~ 125 (560)
|-.+.|+|+.||+|+++++| .....++++++... .... .+ .|.... -.-..|.||++.++.
T Consensus 30 F~P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~ 109 (140)
T 1qhq_A 30 FAQTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVT 109 (140)
T ss_dssp BSCSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEE
T ss_pred EeCCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEE
Confidence 33479999999999999999 66778888887321 0000 00 010000 001347899999999
Q ss_pred EEEcccCcceeEeecccccc-ccceEeEEEeC
Q 008592 126 FTVTGQRGTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 126 ~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|++ +.+|+|||||+..+.. .||.|.|+|.+
T Consensus 110 ~~~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 110 FRT-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp EEC-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred EEe-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 997 7899999999986655 79999999964
No 79
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.54 E-value=2.7e-07 Score=74.27 Aligned_cols=72 Identities=17% Similarity=0.324 Sum_probs=57.0
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|. |.+ ...|.+|+|+.. +...++..+.||+...+.| +.
T Consensus 20 ~i~v~~Gd~V~~~--n~~---~~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~~ 68 (91)
T 1bxv_A 20 TIEIQAGDTVQWV--NNK---LAPHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--SE 68 (91)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--CC
Confidence 4789999999986 432 368999998721 0114678889998877765 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||| .|.+.||...+.|+
T Consensus 69 ~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 69 PGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CEEEEEEeC--CCccCCCEEEEEEC
Confidence 999999999 89999999999873
No 80
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.51 E-value=2.7e-07 Score=75.46 Aligned_cols=80 Identities=15% Similarity=0.198 Sum_probs=56.6
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++ .|.....+++|.++...++.. .++.. .....+.||++++++| +++|+|+|||+.| ..+|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 587777899998875432100 00000 1124579999999988 4799999999932 3379
Q ss_pred ceEeEEEe
Q 008592 148 LYGPIIIL 155 (560)
Q Consensus 148 l~G~liV~ 155 (560)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 81
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=98.51 E-value=1.5e-07 Score=102.16 Aligned_cols=104 Identities=14% Similarity=0.150 Sum_probs=79.8
Q ss_pred eEEEEECCCC--CCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC-----------CCCC------------C-
Q 008592 56 KSIVTVNGQF--PGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW-----------ADGP------------A- 109 (560)
Q Consensus 56 ~~~~~~ng~~--pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~-----------~DGv------------~- 109 (560)
...|++||+. ..+.+++++|++++++|.|.....+.+|+||.......- .+|. +
T Consensus 458 ~~~~~iNG~~~~~~~~~~v~~G~~v~w~l~N~~~~~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 537 (612)
T 2g23_A 458 TKTYRRTAATFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPL 537 (612)
T ss_dssp EEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCC
T ss_pred eeEEEECCccCCCCCceEecCCCEEEEEEEeCCCCCCCeEEcCceEEEecccCcccccccccccCcccccccccccccCC
Confidence 4578999974 458999999999999999998899999999986643110 0110 0
Q ss_pred ------CcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 110 ------YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 110 ------~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
.-.-..|.||++.+++|+....+|.|.||||..... .||.+.|.|.+++.
T Consensus 538 ~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GMm~~f~V~p~~~ 594 (612)
T 2g23_A 538 APNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTCEEEEEEECHHH
T ss_pred CcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCCceEEEECchhh
Confidence 001133789999999999843899999999987665 89999999987653
No 82
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.49 E-value=5e-07 Score=75.90 Aligned_cols=74 Identities=23% Similarity=0.337 Sum_probs=58.3
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|+|.+.|.. ...|-|++.... -+..+.||+...+.|.++.
T Consensus 39 ~i~v~~G~~V~~~~~n~d---~~~H~~~i~~~~----------------------------~~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 39 TLVVKKGDAVKVVVENKS---PISEGFSIDAFG----------------------------VQEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEETTCEEEEEEEECS---SSCEEEEEGGGT----------------------------EEEEECTTCEEEEEEECCS
T ss_pred EEEEeCCCEEEEEEEECC---CCeEEEEEcCCC----------------------------ceeEeCCCCEEEEEEECCC
Confidence 478999999999999964 234544443211 1567999999999999999
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
||.|.||||+..|... |...+.|++
T Consensus 88 ~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 88 AGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp CEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CEEEEEECCCCCchHH-CEEEEEEeC
Confidence 9999999999888655 999998853
No 83
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=98.46 E-value=4.6e-07 Score=91.79 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=79.7
Q ss_pred eeEEEEECCCCCC--cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC-----CcCccccCCCCeEEEEEE
Q 008592 55 TKSIVTVNGQFPG--PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA-----YVTQCPIQTGQSYVYNFT 127 (560)
Q Consensus 55 ~~~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~-----~~tq~~i~pG~~~~Y~~~ 127 (560)
....++|||+.-. +.|.+++|++++++|.|.....+.+|+||....... .||.+ ......|.||++++..|+
T Consensus 164 ~~~~~~ING~~~~~~~~~~v~~G~~vrlrliN~~~~~h~~hlhGh~f~vi~-~DG~~~~~p~~~dtv~l~pg~r~~v~~~ 242 (339)
T 2zwn_A 164 VADYFSVNAKSFPLTQPLRVKKGDVVKIRFFGAGGGIHAMHSHGHDMLVTH-KDGLPLDSPYYADTVLVSPGERYDVIIE 242 (339)
T ss_dssp CCCEEEETTBCTTSSCCEEECTTCEEEEEEEECSSSCEEEEETTCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEEE
T ss_pred ccceEEEccccCCCcccEEECCCCEEEEEEEeCCCceEEEEECCcEEEEEE-eCCeecCCCcEEEEEEECCCCEEEEEEE
Confidence 3457999998532 349999999999999999888999999998665443 68853 123455889999999999
Q ss_pred EcccCcceeEeeccccc-------cccceEeEEEeCCC
Q 008592 128 VTGQRGTLFWHAHISWL-------RATLYGPIIILPKQ 158 (560)
Q Consensus 128 ~~~~~Gt~wYH~H~~~~-------~~Gl~G~liV~~~~ 158 (560)
+ +++|.|++|||.... ..||.+.|.+.+..
T Consensus 243 ~-~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 243 A-DNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp C-CSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred e-CCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 8 779999999997553 26888887777654
No 84
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.45 E-value=4e-07 Score=73.32 Aligned_cols=74 Identities=18% Similarity=0.252 Sum_probs=55.3
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeeccccccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRA 146 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~ 146 (560)
.+.|+++.||+|++ .|.....+++|.++.. ++. .....+.||+++++.| +++|+|||||+.|. .+
T Consensus 18 P~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~----~~~-----~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~-~~ 82 (91)
T 1bxv_A 18 PSTIEIQAGDTVQW--VNNKLAPHNVVVEGQP----ELS-----HKDLAFSPGETFEATF---SEPGTYTYYCEPHR-GA 82 (91)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEETTCG----GGC-----EEEEECSTTCEEEEEC---CSCEEEEEECTTTG-GG
T ss_pred CCEEEECCCCEEEE--EECCCCCcEEEEeCCC----ccC-----cccceeCCCCEEEEEe---CCCEEEEEEeCCCc-cC
Confidence 36899999999765 5877778899988721 100 1124578999998877 57999999999432 35
Q ss_pred cceEeEEEe
Q 008592 147 TLYGPIIIL 155 (560)
Q Consensus 147 Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 83 gM~g~i~V~ 91 (91)
T 1bxv_A 83 GMVGKIVVQ 91 (91)
T ss_dssp TCEEEEEEC
T ss_pred CCEEEEEEC
Confidence 999999984
No 85
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.44 E-value=3.7e-07 Score=74.50 Aligned_cols=78 Identities=15% Similarity=0.317 Sum_probs=58.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|.+++++..+ ..+ .. ...+++..+.||+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~---~~~H~~~~~~~~~-----~~~-------~~------~~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNK---VGPHNVIFDKVPA-----GES-------AP------ALSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECS---SCCCCBEEEECCT-----TSC-------HH------HHCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCCCC-----ccc-------cc------cccccceecCCCCEEEEEe--CC
Confidence 4789999999887 532 3689999987654 000 00 0014677888998887766 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||+ .|.++||...+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999883
No 86
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.42 E-value=1.1e-06 Score=72.15 Aligned_cols=72 Identities=22% Similarity=0.399 Sum_probs=58.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|++.|.+ ...|.|.+.+..+ ...+.||....+.|.++.
T Consensus 29 ~i~v~~G~tV~~~~~n~d---~~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~~ 77 (100)
T 4hci_A 29 VITIPINESTTLLLKNKG---KSEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPKS 77 (100)
T ss_dssp EEEECTTSCEEEEEEECS---SSCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCCS
T ss_pred EEEECCCCEEEEEEEcCC---CceEEEEEecCCc----------------------------ceeecCCcceeEEEeccc
Confidence 478999999999999964 3567776654432 234778889999999999
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|. .|...||.+.+.|+
T Consensus 78 ~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 78 AGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CceEEEECc--cccCCCCEEEEEEC
Confidence 999999996 69999999999884
No 87
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.40 E-value=9.9e-07 Score=72.24 Aligned_cols=82 Identities=13% Similarity=0.156 Sum_probs=58.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+| .|.+ ...|.+|+++..|. . + ++. .. ....+|++.+.||+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~~~~~~~~~p---~--g-~~~----~~----~~~~~~~~~~~~G~~~~~~f--~~ 76 (99)
T 1byp_A 18 DLSIASGEKITF--KNNA---GFPHNDLFDKKEVP---A--G-VDV----TK----ISMPEEDLLNAPGEEYSVTL--TE 76 (99)
T ss_dssp EEEECTTEEEEE--EECS---SCCBCCEECTTSSC---T--T-CCH----HH----HSCCTTCCBCSTTCEEEEEE--CS
T ss_pred EEEECCCCEEEE--EECC---CCcceEEEeCCCCc---c--c-ccc----cc----ccccccceeeCCCCEEEEEe--CC
Confidence 478999999988 4543 36899999985440 0 0 000 00 00125667889999888766 69
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||+ .|.++||...|.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 77 KGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CcEEEEEcC--CccccCCEEEEEEC
Confidence 999999999 79999999999883
No 88
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.40 E-value=8e-07 Score=72.50 Aligned_cols=77 Identities=18% Similarity=0.210 Sum_probs=54.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC--cCccccCCCCeEEEEEEEcccCcceeEeecccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY--VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~--~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~ 145 (560)
+.|++++||+| ++.|.....++++.++...+ +|..+ .....+.||+++++.| +++|+|+|||+.| ..
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H-~~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPH-RG 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSST-TT
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccCh-hh
Confidence 68999999986 55687767788888765331 11000 0123578999999887 5799999999932 33
Q ss_pred ccceEeEEEe
Q 008592 146 ATLYGPIIIL 155 (560)
Q Consensus 146 ~Gl~G~liV~ 155 (560)
+||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 6999999984
No 89
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.36 E-value=8.5e-07 Score=73.06 Aligned_cols=82 Identities=11% Similarity=0.042 Sum_probs=54.5
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCC--cCCCCCCCc--CccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRS--GWADGPAYV--TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~--~~~DGv~~~--tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
+.|++++||+|+ +.|.....++++++.-..... ..++..+++ +...+.||++++++| +++|+|+|||+ ..
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~-~H 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCT-PH 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECS-TT
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeC-CC
Confidence 789999999976 558876778887773100000 000000111 224579999999888 57999999999 33
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
..+||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 347999999984
No 90
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.35 E-value=1.3e-06 Score=74.29 Aligned_cols=75 Identities=13% Similarity=0.170 Sum_probs=52.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|++.+.|. + |++......+-+|. ....+.||++++|+| +.+|+|||+|-.| ..+|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~---~~f~~~pg~t~s~TF---~~pG~y~y~C~~H-~~~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGV---ESFKSKINESYTLTV---TEPGLYGVKCTPH-FGMG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTC---CCCBCCTTCCEEEEE---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 699999999988877762 3 44332211112332 123457999999888 4699999999843 2379
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 91
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.30 E-value=1.1e-06 Score=75.17 Aligned_cols=76 Identities=13% Similarity=0.260 Sum_probs=52.3
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++.+.|. + |++......+-||. ....+.||++++|+| +.+|+|||||-.| ..+|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~---~~f~s~pGet~s~TF---~~pG~y~y~C~~H-~~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGA---ETWKGKINEEITVTL---SKPGVYMYQCAPH-VGMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTC---CCCBCCTTCCCEEEC---CSCEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCc---cceecCCCCEEEEEe---CCCeEEEEEeCCC-CcCC
Confidence 799999999977766553 3 44432211111222 123457999988888 4799999999854 3479
Q ss_pred ceEeEEEeCCC
Q 008592 148 LYGPIIILPKQ 158 (560)
Q Consensus 148 l~G~liV~~~~ 158 (560)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 92
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=98.30 E-value=2.6e-06 Score=86.29 Aligned_cols=98 Identities=18% Similarity=0.146 Sum_probs=71.5
Q ss_pred EEEEECCCCC----CcEEEEecCCEEEEEEEeCCCcC--eeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEE
Q 008592 57 SIVTVNGQFP----GPRIIAREGDRLLIRVINNVKYN--VTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVY 124 (560)
Q Consensus 57 ~~~~~ng~~p----GP~i~~~~Gd~v~v~~~N~l~~~--~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y 124 (560)
..++|||+.- -|.|.+++|+++++.+.|..... ..+|.|++.+. .||.. .+....|.||++++.
T Consensus 216 ~~~~iNG~~~~~~~~~~l~v~~G~r~Rl~n~~~~~~~~~~~i~gh~~~Vi----~dG~~~~~p~~~~dtv~l~pGer~~v 291 (340)
T 2bw4_A 216 THIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVW----ATGKFRNPPDLDQETWLIPGGTAGAA 291 (340)
T ss_dssp SEEEETTSTTTTSGGGCEEEETTCEEEEEEEESSSCBCEEEETCCEEEEE----TTCCTTSCCEEEESCCCBCTTEEEEE
T ss_pred CEEEECCccCCccCCCceEcCCCCEEEEEECCCCCccceEEecCcceEEe----CCCcccCCccccceEEEeCCCceEEE
Confidence 4799999963 38999999999988777754332 23344444432 36643 123356899999999
Q ss_pred EEEEcccCcceeEeecccc--ccccceEeEEEeCCCC
Q 008592 125 NFTVTGQRGTLFWHAHISW--LRATLYGPIIILPKQQ 159 (560)
Q Consensus 125 ~~~~~~~~Gt~wYH~H~~~--~~~Gl~G~liV~~~~~ 159 (560)
.++. +++|.||||||... ...||.|.|.|.++..
T Consensus 292 ~v~~-~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 292 FYTF-RQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp EEEC-CSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred EEEC-CCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 9997 67999999999863 3589999999987653
No 93
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.30 E-value=2.4e-06 Score=69.87 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=55.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC------CcCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA------YVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~------~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
..|++++||+| +++|.....+++|.++...+ +|.. ......+.||++++++|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f~---~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTLT---EKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEEC---SCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEeC---CCcEEEEEcCC
Confidence 68999999985 45788877888888874321 2211 011235789999998874 79999999993
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
...+||.|.|+|+
T Consensus 87 -H~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 -HAGAGMVGKVTVN 99 (99)
T ss_dssp -GTTTTCEEEEEEC
T ss_pred -ccccCCEEEEEEC
Confidence 2346999999984
No 94
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.28 E-value=2.4e-06 Score=69.88 Aligned_cols=77 Identities=12% Similarity=0.200 Sum_probs=55.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC----C--cCccccCCCCeEEEEEEEcccCcceeEeecc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA----Y--VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI 141 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~----~--~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~ 141 (560)
+.|++++||+|+ ++|....+++++.++...+ +|.. + .....+.||++++++|. ++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf~---~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVALS---NKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEECC---SCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEEC---CCceEEEEcCC
Confidence 689999999765 4788777888888764321 1110 0 11134789999998873 79999999993
Q ss_pred ccccccceEeEEEe
Q 008592 142 SWLRATLYGPIIIL 155 (560)
Q Consensus 142 ~~~~~Gl~G~liV~ 155 (560)
| ..+||.|.|+|+
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 2 337999999984
No 95
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=98.25 E-value=3.8e-06 Score=90.77 Aligned_cols=86 Identities=27% Similarity=0.358 Sum_probs=70.4
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccce------eEeCCCCEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNT------VGVPSGGWVA 509 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDT------v~vpp~g~v~ 509 (560)
++++++.|++|++.+.|.- ....+.+|+||... .+. .|-|- ..|+||+..+
T Consensus 34 P~I~~~~GD~v~v~v~N~l--~~~~tsiHwHGl~~----~~~-----------------~~~DGv~~vtq~~I~PG~s~t 90 (552)
T 1aoz_A 34 PTIRANAGDSVVVELTNKL--HTEGVVIHWHGILQ----RGT-----------------PWADGTASISQCAINPGETFF 90 (552)
T ss_dssp CCEEEETTCEEEEEEEECC--SSCCBCEEEETCCC----TTC-----------------GGGSCCBTTTBCCBCTTCEEE
T ss_pred CcEEEeCCCEEEEEEEeCC--CCCCeeEEeCCCcc----CCC-----------------cccCCCcccccCCcCCCCeEE
Confidence 3589999999999999963 23789999999764 110 11221 3589999999
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
.+|+++.+|.|.||||...+...||.+.+.|.+++
T Consensus 91 Y~f~~~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~ 125 (552)
T 1aoz_A 91 YNFTVDNPGTFFYHGHLGMQRSAGLYGSLIVDPPQ 125 (552)
T ss_dssp EEEECCSCEEEEEEECSTTTGGGTCEEEEEEECCT
T ss_pred EEEECCCCEEEEEEECchhHHhccCeeeEEEeCCc
Confidence 99999999999999999999999999999998764
No 96
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.25 E-value=2e-06 Score=70.85 Aligned_cols=84 Identities=14% Similarity=0.129 Sum_probs=57.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCc-cceeEeCCCCEEEEEEEec
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE-RNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~-rDTv~vpp~g~v~irf~ad 515 (560)
.+.++.|++|+|+ |.+ ...|.++++.-... .+.+... . ..+.+ .+++.+.||+...+.| +
T Consensus 18 ~i~v~~G~tV~~~--n~~---~~~H~~~~~~~~~~-----~~~~~~~------~-~~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 18 SITVSAGEAVEFT--LVG---ETGHNIVFDIPAGA-----PGTVASE------L-KAASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp EEEECTTCCEEEE--ECS---SSCBCCEECCCTTC-----CHHHHHH------H-HHTSCCTTCCBBTTBCEEEECC--C
T ss_pred EEEECCCCEEEEE--ECC---CCCeEEEEeCcccc-----cccccch------h-hcccccccceecCCCCEEEEEe--C
Confidence 4789999999986 543 36899998731100 0000000 0 00122 4677889998877766 8
Q ss_pred CceeeEEEeechhhhhcccEEEEEEc
Q 008592 516 NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 516 npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.||.|.|||+ .|.++||...|.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999884
No 97
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.21 E-value=5.1e-06 Score=70.53 Aligned_cols=75 Identities=8% Similarity=-0.027 Sum_probs=52.2
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
..|++++||+|++. |.. .++++..+.... -+|. ....+.||++++|+| +.+|+|||||-.| ..+|
T Consensus 22 ~~i~V~~GDTV~f~--n~~-~~Hnv~~~~~~~-----p~g~---~~~~~~pg~t~s~TF---~~~G~y~Y~C~~H-~~~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKFV--PTD-KSHNAESVREVW-----PEGV---APVKGGFSKEVVFNA---EKEGLYVLKCAPH-YGMG 86 (124)
T ss_dssp SEEEECTTCEEEEE--CSS-SSCCCEECTTTS-----CTTS---CCCBCCTTCCEEEEC---CSSEEEEEECTTT-GGGT
T ss_pred CEEEECCCCEEEEE--ECC-CCccEEEeCCcC-----CCCc---cccccCCCCEEEEEe---CCCeEEEEEcCCC-CcCC
Confidence 69999999997655 543 566665552211 1222 123467999999888 4689999999632 2379
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999874
No 98
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=98.20 E-value=3.5e-06 Score=90.20 Aligned_cols=102 Identities=19% Similarity=0.186 Sum_probs=75.0
Q ss_pred eEEEEECCCCC-C-cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcC---------------CCCCC--------C
Q 008592 56 KSIVTVNGQFP-G-PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGW---------------ADGPA--------Y 110 (560)
Q Consensus 56 ~~~~~~ng~~p-G-P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~---------------~DGv~--------~ 110 (560)
...|.+||+.. . +.+.++.|+.++++|.|.....+.+|+||........ ..|.+ +
T Consensus 383 ~~~~~iNg~~~~~~~~~~~~~g~~~~w~l~N~~~~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (513)
T 2wsd_A 383 RPVLLLNNKRWHDPVTETPKVGTTEIWSIINPTRGTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKG 462 (513)
T ss_dssp CEEEEETTBCTTSCCCBCCBTTCEEEEEEEECSSSCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSS
T ss_pred CceEeECCccCCCcccEecCCCCEEEEEEEcCCCCCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccC
Confidence 34678999853 3 3578999999999999998899999999986432110 01111 1
Q ss_pred c-CccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCC
Q 008592 111 V-TQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPK 157 (560)
Q Consensus 111 ~-tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~ 157 (560)
. .-..|.||++.+..+...+.+|.|.||||..... .||.+.+.|.++
T Consensus 463 ~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~GMm~~~~V~~~ 511 (513)
T 2wsd_A 463 WKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDYDMMRPMDITDP 511 (513)
T ss_dssp CBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTTTCEEEEEEBCC
T ss_pred cccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhcCCceeEEEeCC
Confidence 0 1123788998887777646799999999987655 899999999864
No 99
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.13 E-value=5e-06 Score=67.97 Aligned_cols=82 Identities=13% Similarity=0.165 Sum_probs=57.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+| .|.+ ...|.++++...+- . + .+ ... ....++.+.+.||+...+.| +.
T Consensus 18 ~i~v~~G~tV~~--~n~~---~~~H~v~~~~~~~p---~--~-~~------~~~--~~~~~~~~~~~~G~~~~~tf--~~ 76 (99)
T 1plc_A 18 EFSISPGEKIVF--KNNA---GFPHNIVFDEDSIP---S--G-VD------ASK--ISMSEEDLLNAKGETFEVAL--SN 76 (99)
T ss_dssp EEEECTTCEEEE--EECS---SCCBCCEECTTSSC---T--T-CC------HHH--HCCCTTCCBCSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEE--EECC---CCceEEEEeCCCCc---c--c-cc------ccc--cccccCccccCCCCEEEEEE--CC
Confidence 478999999988 4543 36899999875330 0 0 00 000 00124556788998877765 69
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||+ .|..+||...+.|+
T Consensus 77 ~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 77 KGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CceEEEEcC--CCcccCCEEEEEEC
Confidence 999999999 79999999999873
No 100
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.13 E-value=4.6e-07 Score=101.04 Aligned_cols=97 Identities=11% Similarity=0.092 Sum_probs=79.3
Q ss_pred EEEEECCCCCC--cEEEEecCCEEEEEEEeCCC--cCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccC
Q 008592 57 SIVTVNGQFPG--PRIIAREGDRLLIRVINNVK--YNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQR 132 (560)
Q Consensus 57 ~~~~~ng~~pG--P~i~~~~Gd~v~v~~~N~l~--~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~ 132 (560)
.+++|||+..+ |.|.+++|++++++|.|... ..+.+|+||....... .||. ......|.||++++..|.+ +++
T Consensus 355 ~~~~ING~~~~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~-~dg~-~~Dtv~l~Pg~~~~v~~~a-d~p 431 (770)
T 2r7e_B 355 RFHAINGYIMDTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRK-KEEY-KMALYNLYPGVFETVEMLP-SKA 431 (770)
T ss_dssp CEECTTSCTTTTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCS-SSCC-EESEEECCTTCCCEEEECC-SSC
T ss_pred CccccCCccCCCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEe-cCCc-eeeEEEECCCeEEEEEEEe-CCC
Confidence 46899999764 78999999999999999864 4799999998776553 5653 2233668999999999997 789
Q ss_pred cceeEeecccccc-ccceEeEEEeC
Q 008592 133 GTLFWHAHISWLR-ATLYGPIIILP 156 (560)
Q Consensus 133 Gt~wYH~H~~~~~-~Gl~G~liV~~ 156 (560)
|.|++|||..... .||.+.|.|..
T Consensus 432 G~w~~hcH~~~H~~~GM~~~~~V~s 456 (770)
T 2r7e_B 432 GIWRVECLIGEHLHAGMSTLFLVYS 456 (770)
T ss_dssp BCCCBCCCSHHHHTTBCCCCCCBCC
T ss_pred CceEEEecccccccccccccccccc
Confidence 9999999987654 89999998854
No 101
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.12 E-value=8.2e-06 Score=69.93 Aligned_cols=92 Identities=8% Similarity=0.021 Sum_probs=60.1
Q ss_pred CCCcEEEEecC-CEEEEEEEeCCCcC-----eeE--EecCcccC-------CCcCCC----CCCC-c-CccccCCCCeEE
Q 008592 65 FPGPRIIAREG-DRLLIRVINNVKYN-----VTI--HWHGVRQL-------RSGWAD----GPAY-V-TQCPIQTGQSYV 123 (560)
Q Consensus 65 ~pGP~i~~~~G-d~v~v~~~N~l~~~-----~~i--H~HG~~~~-------~~~~~D----Gv~~-~-tq~~i~pG~~~~ 123 (560)
|--..|.|++| |+|+|+|+|....+ +++ --+|.... ....++ +-+. + ...-|.||++.+
T Consensus 15 F~p~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~s 94 (129)
T 1cuo_A 15 YSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTS 94 (129)
T ss_dssp CSCSEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEE
T ss_pred EccCeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEE
Confidence 33358999999 99999999986432 332 22331100 000001 0010 0 112478999999
Q ss_pred EEEEEc--ccCcceeEeeccccccccceEeEEEeC
Q 008592 124 YNFTVT--GQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 124 Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+.|+++ .++|+|||.|-..+.+.||.|-|+|.+
T Consensus 95 vtf~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 95 VKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EEEEGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred EEEeccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 999973 289999999987777669999999963
No 102
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.12 E-value=1.5e-05 Score=66.01 Aligned_cols=77 Identities=13% Similarity=0.244 Sum_probs=53.2
Q ss_pred CCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccc
Q 008592 64 QFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISW 143 (560)
Q Consensus 64 ~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~ 143 (560)
.|--..|+++.||+|++ .|.....+++....... |........+.||+++++.| +++|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 34347999999999765 48876666665543221 11001112478999999888 47999999998764
Q ss_pred ccccceEeEEEe
Q 008592 144 LRATLYGPIIIL 155 (560)
Q Consensus 144 ~~~Gl~G~liV~ 155 (560)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 103
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=98.06 E-value=1.3e-05 Score=86.41 Aligned_cols=86 Identities=16% Similarity=0.319 Sum_probs=70.2
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccce------eEeCCCCEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNT------VGVPSGGWVA 509 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDT------v~vpp~g~v~ 509 (560)
++++++.|++|++.+.|.- ....+.+|.||-... + +.|-|- -.|+||+..+
T Consensus 98 P~I~~~~GD~v~V~v~N~l--~~~~tsIHwHGl~~~----~-----------------t~~~DGvp~vTq~pI~PG~sft 154 (580)
T 3sqr_A 98 PAIIADWGDNLIIHVTNNL--EHNGTSIHWHGIRQL----G-----------------SLEYDGVPGVTQCPIAPGDTLT 154 (580)
T ss_dssp CCEEEETTCEEEEEEEECC--SSCCBCEEETTCCCT----T-----------------CGGGSCCBTTTBCCBCTTCEEE
T ss_pred ceEEEeCCCEEEEEEEECC--CCCcceEEecccccC----C-----------------CccccCCCccccCCCCCCCeEE
Confidence 4589999999999999963 235789999998641 1 112222 2489999999
Q ss_pred EEEEecCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 510 IRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 510 irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
.+|+++.+|.|.||||...+...||.+.+.|.++.
T Consensus 155 Y~f~~~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~ 189 (580)
T 3sqr_A 155 YKFQVTQYGTTWYHSHFSLQYGDGLFGPLIINGPA 189 (580)
T ss_dssp EEEECCCCEEEEEEECSTTGGGGTCEEEEEEECCC
T ss_pred EEEECCCCcceEEeecccccccCcCEEEEEeeCcc
Confidence 99999999999999999999999999999998764
No 104
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.04 E-value=1.4e-05 Score=67.95 Aligned_cols=75 Identities=15% Similarity=0.152 Sum_probs=49.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++. |... .+++..+ ...+-||... ....||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f~--~~~~-~H~v~~~-----~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTFI--PVDK-GHNVESI-----KDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHY-AMG 85 (123)
T ss_dssp SEEEECTTCEEEEE--ESSS-SCCCEEC-----TTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEE--ECCC-CeEEEEe-----cccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCcc-cCC
Confidence 69999999997654 5433 3333332 1111233211 2346899988887 46999999997422 369
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 105
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.02 E-value=9.7e-06 Score=72.40 Aligned_cols=93 Identities=12% Similarity=0.034 Sum_probs=60.4
Q ss_pred CCCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEEe--cCcccC------CCcCCCCCC----C-c-CccccCCCCeEE
Q 008592 64 QFPGPRIIA-REGDRLLIRVINNVKYN-----VTIHW--HGVRQL------RSGWADGPA----Y-V-TQCPIQTGQSYV 123 (560)
Q Consensus 64 ~~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~~~------~~~~~DGv~----~-~-tq~~i~pG~~~~ 123 (560)
+|--..|.| +.||+|+|+|+|....+ +++-+ +|.... ....++=++ . + ...-|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 444468999 99999999999987543 33222 221000 000001000 0 0 112479999999
Q ss_pred EEEEEc-ccCcceeEeeccccccccceEeEEEeC
Q 008592 124 YNFTVT-GQRGTLFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 124 Y~~~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+.|+++ -++|+|||+|-..+++.||.|-|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999873 279999999988776669999999963
No 106
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=98.02 E-value=6.8e-06 Score=88.15 Aligned_cols=101 Identities=15% Similarity=0.051 Sum_probs=75.0
Q ss_pred EEEECCCCCC----c-EEEEecCCEEEEEEEeCCC-cCeeEEecCcccCCCcCCCCC----------CCcCccccCCCCe
Q 008592 58 IVTVNGQFPG----P-RIIAREGDRLLIRVINNVK-YNVTIHWHGVRQLRSGWADGP----------AYVTQCPIQTGQS 121 (560)
Q Consensus 58 ~~~~ng~~pG----P-~i~~~~Gd~v~v~~~N~l~-~~~~iH~HG~~~~~~~~~DGv----------~~~tq~~i~pG~~ 121 (560)
.|++||+... | .+.++.|+.+++.+.|... ..+.+|+||.........+|. +.-.-..|.||++
T Consensus 360 ~w~iNG~~f~~~~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~~~~~~~rDTV~v~pg~~ 439 (534)
T 3abg_A 360 TWTINGVAFADVQNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVMPYESGLKDVVWLGRRET 439 (534)
T ss_dssp TTCCCCBTTBCTTSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCCSGGGSCBSEECCCSSEE
T ss_pred eeEECCcccCCCCCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCCccccCCcCeEEcCCCCE
Confidence 4789997532 3 4689999999999999874 599999999765433211231 0011124789999
Q ss_pred EEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCC
Q 008592 122 YVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQ 158 (560)
Q Consensus 122 ~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~ 158 (560)
.+.+|...+.+|.|.||||..... .||.+.|.|...+
T Consensus 440 v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 440 VVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp EEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 999998337899999999987665 8999999998765
No 107
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.01 E-value=1.8e-05 Score=84.71 Aligned_cols=79 Identities=16% Similarity=0.323 Sum_probs=63.4
Q ss_pred cEEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEe
Q 008592 435 TKVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLA 514 (560)
Q Consensus 435 ~~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~a 514 (560)
.+.+.++.|+.|+|.+.|........|.|+++++.+. ..+.||....+.|++
T Consensus 512 pp~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta 563 (595)
T 1fwx_A 512 IESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVA 563 (595)
T ss_dssp CSEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEEC
T ss_pred CCEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEEC
Confidence 3468899999999999995421234799998875431 457889999999999
Q ss_pred cCceeeEEEee---chhhhhcccEEEEEEcCC
Q 008592 515 DNPGVWFMHCH---LEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 515 dnpG~w~~HCH---il~H~d~GMm~~~~V~~~ 543 (560)
+.||.|.|||| ...|. ||...+.|++.
T Consensus 564 ~~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p~ 593 (595)
T 1fwx_A 564 ANPGVYWYYCQWFCHALHM--EMRGRMLVEPK 593 (595)
T ss_dssp CSCEEEEEECCSCCSTTCT--TCEEEEEEECC
T ss_pred CCCEEEEEECCCCCCCCcc--CCEEEEEEEcC
Confidence 99999999999 45675 99999999764
No 108
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.99 E-value=3.3e-05 Score=68.44 Aligned_cols=89 Identities=16% Similarity=0.304 Sum_probs=60.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCc---cceeEeCCCC--EEEE
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAE---RNTVGVPSGG--WVAI 510 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~---rDTv~vpp~g--~v~i 510 (560)
+.+.++.|++|.+.+.|.+ ....|-+-++.. + ..+.... ...+.. .-+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~--~~~~H~~~i~~~-------~-~~~~~~~------~~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTN--KGFGHSFDITKK-------G-PPYAVMP------VIDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECC--TTCCCCCEEESC-------C-SCCCSSC------CCCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCC--CCeeeEEEEeec-------C-cchhccc------cccccccccccccccCCCCceEEEE
Confidence 4689999999999999953 134566555521 1 0111000 000000 0112678999 9999
Q ss_pred EEEecCceeeEEEeechhhhhcccEEEEEEc
Q 008592 511 RFLADNPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 511 rf~adnpG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.|.+ .||.|.||||+.-|...||-..+.|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999873
No 109
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.97 E-value=3.4e-05 Score=62.80 Aligned_cols=78 Identities=14% Similarity=0.124 Sum_probs=54.3
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC----cCccccCCCCeEEEEEEEcccCcceeEeeccc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY----VTQCPIQTGQSYVYNFTVTGQRGTLFWHAHIS 142 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~----~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~ 142 (560)
.+.|++++||+|++ .|.....+++....-.. -+|.-. .+...+.||++++++| +++|+|+|+|-.|
T Consensus 17 P~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~-----p~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H 86 (98)
T 1iuz_A 17 PSKISVAAGEAIEF--VNNAGFPHNIVFDEDAV-----PAGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPH 86 (98)
T ss_dssp SSEEEECTTCEEEE--EECSSCCEEEEECTTSS-----CTTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTT
T ss_pred CCEEEECCCCEEEE--EECCCCCEEEEEeCCCC-----ccccccccccccccccCCCCEEEEEc---CCCEEEEEEchhh
Confidence 37999999999655 58776777777664211 122210 0112478999999888 4799999999863
Q ss_pred cccccceEeEEEe
Q 008592 143 WLRATLYGPIIIL 155 (560)
Q Consensus 143 ~~~~Gl~G~liV~ 155 (560)
. .+||.|.|+|+
T Consensus 87 ~-~~gM~G~I~V~ 98 (98)
T 1iuz_A 87 A-GAGMKMTITVQ 98 (98)
T ss_dssp G-GGTCEEEEEEC
T ss_pred c-cCCCEEEEEEC
Confidence 2 36999999984
No 110
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=97.97 E-value=1.7e-05 Score=67.48 Aligned_cols=75 Identities=15% Similarity=0.208 Sum_probs=49.6
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++ .|... .+++..+ ...+-||.. ...+.||++++|.| +.+|+|||+|..|. .+|
T Consensus 21 ~~i~V~~GdtV~f--~n~~~-~H~v~~~-----~~~~p~~~~---~~~~~pG~t~~~tF---~~~G~y~y~C~~H~-~~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIKF--LPTDK-GHNVETI-----KGMAPDGAD---YVKTTVGQEAVVKF---DKEGVYGFKCAPHY-MMG 85 (123)
T ss_dssp SEEEECTTCEEEE--ECSSS-SCCCEEC-----TTSSCTTCC---CCBCCTTSCEEEEC---CSCEEEEEECSTTT-TTT
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEe-----cccCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCcc-ccC
Confidence 6999999999654 55533 4333332 111123321 12357999988888 46999999997422 379
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 111
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.96 E-value=4.2e-05 Score=80.24 Aligned_cols=89 Identities=11% Similarity=0.161 Sum_probs=64.5
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEeCC---CcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEccc
Q 008592 55 TKSIVTVNGQFPGPRIIAREGDRLLIRVINNV---KYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQ 131 (560)
Q Consensus 55 ~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l---~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~ 131 (560)
...+...+-.|-.+.|+|++||+|++.++|.. +..+++...++.. ..-+.||++.++.|++ ++
T Consensus 545 ~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI-------------K~DaiPGrtnsvtFta-dk 610 (638)
T 3sbq_A 545 RVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV-------------SMEISPQQTSSITFVA-DK 610 (638)
T ss_dssp EEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE-------------EEEECTTCEEEEEEEC-CS
T ss_pred EEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCCCc-------------eeeeCCCCeEEEEEEc-CC
Confidence 33444555566668999999999999999974 3343333332211 1347899999999997 89
Q ss_pred CcceeEeeccccc--cccceEeEEEeCC
Q 008592 132 RGTLFWHAHISWL--RATLYGPIIILPK 157 (560)
Q Consensus 132 ~Gt~wYH~H~~~~--~~Gl~G~liV~~~ 157 (560)
+|+|||+|..... -.+|.|-|+|+++
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEecC
Confidence 9999999985322 2789999999864
No 112
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.89 E-value=4e-05 Score=63.26 Aligned_cols=72 Identities=17% Similarity=0.243 Sum_probs=50.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.. ...|.+|+|... .|. ..+ ++-.+.||+...+.| +.
T Consensus 34 ~i~v~~Gd~V~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~~-~~~~~~pG~~~~~tf--~~ 84 (105)
T 2ov0_A 34 ELHVKVGDTVTWI--NRE---AMPHNVHFVAGV-------LGE--------------AAL-KGPMMKKEQAYSLTF--TE 84 (105)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SCE-ECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEcCCC-------CCc--------------ccc-cccccCCCCEEEEEe--CC
Confidence 5789999999985 543 368999988522 010 001 122367888766655 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||++ |. ||.+.+.|+
T Consensus 85 ~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 85 AGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999998 65 999999873
No 113
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=97.85 E-value=9e-05 Score=63.42 Aligned_cols=92 Identities=14% Similarity=0.131 Sum_probs=58.6
Q ss_pred CCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEE--ecCcccC-------CCcCCC----CCCC-c-CccccCCCCeEE
Q 008592 65 FPGPRIIA-REGDRLLIRVINNVKYN-----VTIH--WHGVRQL-------RSGWAD----GPAY-V-TQCPIQTGQSYV 123 (560)
Q Consensus 65 ~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH--~HG~~~~-------~~~~~D----Gv~~-~-tq~~i~pG~~~~ 123 (560)
|--..|.| ++||+|+|+|+|....+ +++- -+|.... ....+| +-+. + ...-|.||++++
T Consensus 15 F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~s 94 (129)
T 2ccw_A 15 YNVKEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDS 94 (129)
T ss_dssp BSCSEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred EecceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEE
Confidence 33358999 99999999999987542 3332 2221000 000011 0010 0 112479999999
Q ss_pred EEEEEc-ccCcc-eeEeeccccccccceEeEEEeC
Q 008592 124 YNFTVT-GQRGT-LFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 124 Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
..|+++ -.+|+ |||.|-..+.+.||.|.|+|.+
T Consensus 95 vtf~~~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~~ 129 (129)
T 2ccw_A 95 VTFDVSKIAAGENYAYFCSFPGHWAMMKGTLKLGS 129 (129)
T ss_dssp EEEEGGGSCTTCCEEEECCSTTGGGTSEEEEEECC
T ss_pred EEEeccccCCCceEEEEeCCCChhHcCEEEEEEeC
Confidence 999973 05665 9999987777779999999963
No 114
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=97.82 E-value=1.7e-05 Score=87.08 Aligned_cols=99 Identities=15% Similarity=0.157 Sum_probs=76.3
Q ss_pred eeEEEEECCCCC--CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCc-----------------------------
Q 008592 55 TKSIVTVNGQFP--GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSG----------------------------- 103 (560)
Q Consensus 55 ~~~~~~~ng~~p--GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~----------------------------- 103 (560)
....+.+|++.. ...+.++.|+.+++.|.|.....+-+|+||.+.....
T Consensus 457 ~~~~~~~n~~~~~~~~~~~~~~g~~~~w~i~N~~~~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 536 (612)
T 3gyr_A 457 RTKTYRRTARTFNDGLGFTIGEGTHEQWTFLNLSPILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVP 536 (612)
T ss_dssp CEEEEEEEECSTTSCCCEEEETTCEEEEEEEECSSSCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECC
T ss_pred ccccccccCccCCCCcceEeCCCCEEEEEEEcCCCCCcCEeECCCcEEEEeecCCcCccccccccccccccccccccccC
Confidence 345677777643 3678999999999999999999999999997553210
Q ss_pred -------CCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccc-ccceEeEEEeCCCC
Q 008592 104 -------WADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLR-ATLYGPIIILPKQQ 159 (560)
Q Consensus 104 -------~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~-~Gl~G~liV~~~~~ 159 (560)
|-|- ..|+||+..+.+|+..+.+|.|.||||..... .||.+.+.|-+++.
T Consensus 537 ~~~~~~~~kDT------v~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 537 LAPNELGHKDV------FQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CCTTCSSCBSE------EEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccCCCCcE------EEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 1121 23678888888888557899999999987665 89999999987654
No 115
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.81 E-value=0.00011 Score=62.70 Aligned_cols=92 Identities=14% Similarity=0.150 Sum_probs=59.9
Q ss_pred CCCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEEec--C---------ccc----CCCcCCCCCCCc-CccccCCCCe
Q 008592 64 QFPGPRIIA-REGDRLLIRVINNVKYN-----VTIHWH--G---------VRQ----LRSGWADGPAYV-TQCPIQTGQS 121 (560)
Q Consensus 64 ~~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH~H--G---------~~~----~~~~~~DGv~~~-tq~~i~pG~~ 121 (560)
+|--..|.| +.|++|+|+|+|....+ +++-+= + +.. .-.+..|.- .+ ...-|.||++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~-~~~~t~~l~pGes 91 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDER-VIAHTSVIGGGET 91 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTT-EEEECCCBCTTCE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccch-hhccceeeCCCCE
Confidence 344468999 99999999999987543 443321 1 000 000001110 00 0124799999
Q ss_pred EEEEEEEc-ccCcc-eeEeeccccccccceEeEEEeC
Q 008592 122 YVYNFTVT-GQRGT-LFWHAHISWLRATLYGPIIILP 156 (560)
Q Consensus 122 ~~Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~~ 156 (560)
+++.|+++ -++|+ |+|.|-..+++.||.|.|+|.+
T Consensus 92 ~~vtf~~~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~~ 128 (128)
T 2iaa_C 92 DSVTFDVSKLKEGEDYAFFCSFPGHWSIMKGTIELGS 128 (128)
T ss_dssp EEEEEESSCCCTTCCEEEECCSTTCTTTSEEEEEECC
T ss_pred EEEEEeccccCCCceEEEEECCCChhHCCEEEEEEeC
Confidence 99999973 16885 9999988777779999999963
No 116
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.81 E-value=5.6e-05 Score=64.11 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=49.8
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecccccccc
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHISWLRAT 147 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~~~~~~G 147 (560)
+.|++++||+|++ .|... .++++... ..+-+|.. ...+.||++++|.| +++|+|||+|-.|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 6999999998655 56543 44444332 11122221 13457899999888 468999999987554
Q ss_pred ceEeEEEeCC
Q 008592 148 LYGPIIILPK 157 (560)
Q Consensus 148 l~G~liV~~~ 157 (560)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
No 117
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.78 E-value=0.00013 Score=62.23 Aligned_cols=92 Identities=10% Similarity=0.037 Sum_probs=59.0
Q ss_pred CCCCcEEEE-ecCCEEEEEEEeCCCcC-----eeEEe--cCccc-------CCCcCCCCCC----C-c-CccccCCCCeE
Q 008592 64 QFPGPRIIA-REGDRLLIRVINNVKYN-----VTIHW--HGVRQ-------LRSGWADGPA----Y-V-TQCPIQTGQSY 122 (560)
Q Consensus 64 ~~pGP~i~~-~~Gd~v~v~~~N~l~~~-----~~iH~--HG~~~-------~~~~~~DGv~----~-~-tq~~i~pG~~~ 122 (560)
+|--..|.| ++||+|+|+|+|....+ +++-+ .|... .....+|=++ . + .-.-|.||+++
T Consensus 14 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~ 93 (128)
T 1nwp_A 14 SFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKD 93 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred cEecCEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEE
Confidence 343368999 99999999999987543 44333 22110 0000011000 0 0 01237999999
Q ss_pred EEEEEEc-ccCcc-eeEeeccccccccceEeEEEe
Q 008592 123 VYNFTVT-GQRGT-LFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 123 ~Y~~~~~-~~~Gt-~wYH~H~~~~~~Gl~G~liV~ 155 (560)
+..|+++ -.+|+ |||.|-..+++.||.|-|+|.
T Consensus 94 svtf~~~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 94 SVTFDVSKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EEEEEGGGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred EEEEeccccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 9999973 15777 999998877777999999984
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.47 E-value=0.00032 Score=59.39 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=51.7
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+..+ ..|-+..+.. .+... .+.+.+.+|....+.| +.
T Consensus 23 ~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~TF--~~ 71 (124)
T 3ef4_A 23 FVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFNA--EK 71 (124)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEEC--CS
T ss_pred EEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEEe--CC
Confidence 4789999999998543 4676666421 11100 0122345777655554 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
||.|.|||- .|...||...+.|.++.
T Consensus 72 ~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 72 EGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 999999995 89999999999998653
No 119
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.46 E-value=0.00026 Score=60.32 Aligned_cols=75 Identities=20% Similarity=0.253 Sum_probs=50.2
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|++.| ..|-+..+... +. .. ...+.+.||+...+. ++.
T Consensus 24 ~i~V~~GDtVtf~n~~------~~H~v~~~~~~----------~P-~g------------~~~f~s~pGet~s~T--F~~ 72 (127)
T 3tu6_A 24 VIRAQPGDTVTFVAKD------KGHNSALMKGG----------AP-EG------------AETWKGKINEEITVT--LSK 72 (127)
T ss_dssp EEEECTTCEEEEECSS------SSCCCEECTTC----------SC-TT------------CCCCBCCTTCCCEEE--CCS
T ss_pred EEEECCCCEEEEEECC------CCceEEEccCc----------CC-CC------------ccceecCCCCEEEEE--eCC
Confidence 4789999999998765 24555443210 00 00 011223467654444 489
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
||.|.|||- .|...||...+.|.++.
T Consensus 73 pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 73 PGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 999999999 69999999999998754
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.42 E-value=0.00051 Score=58.17 Aligned_cols=73 Identities=16% Similarity=0.180 Sum_probs=50.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|++.| ..|-+.++.. ... . .. +.+.+.||+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~P-~-g~-----------~~f~~~pg~t~s~TF--~~ 70 (123)
T 3erx_A 22 FVRAEPGDVINFVPTD------KSHNVEAIKE----------ILP-E-GV-----------ESFKSKINESYTLTV--TE 70 (123)
T ss_dssp EEEECTTEEEEEEESS------TTCCCEECTT----------SSC-T-TC-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCceEEEcCC----------cCC-C-Cc-----------cceecCCCCEEEEEe--CC
Confidence 4789999999998776 2455554421 000 0 00 112245677666555 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~ 542 (560)
||.|.|+|- .|...||...+.|.+
T Consensus 71 pG~y~y~C~--~H~~~GM~G~I~V~~ 94 (123)
T 3erx_A 71 PGLYGVKCT--PHFGMGMVGLVQVGD 94 (123)
T ss_dssp CEEEEEECG--GGTTTTCEEEEEESS
T ss_pred CeEEEEEeC--CCCcCCcEEEEEECC
Confidence 999999999 899999999999976
No 121
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.20 E-value=0.0015 Score=52.78 Aligned_cols=80 Identities=20% Similarity=0.302 Sum_probs=53.4
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+.+.... +. ...+. ...-.+...+.+|....+.| +.
T Consensus 19 ~i~v~~GdtV~~~--n~~---~~~H~v~~~~~~----------~p-----~g~~~-~~~~~~~~~~~~g~~~~~tf--~~ 75 (98)
T 1iuz_A 19 KISVAAGEAIEFV--NNA---GFPHNIVFDEDA----------VP-----AGVDA-DAISYDDYLNSKGETVVRKL--ST 75 (98)
T ss_dssp EEEECTTCEEEEE--ECS---SCCEEEEECTTS----------SC-----TTCCH-HHHCEEEEECSTTCEEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECC---CCCEEEEEeCCC----------Cc-----ccccc-ccccccccccCCCCEEEEEc--CC
Confidence 4789999999996 432 357776655311 00 00000 00012346788998777765 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|-+ |..+||...+.|+
T Consensus 76 ~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 76 PGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp CEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CEEEEEEchh--hccCCCEEEEEEC
Confidence 9999999985 9999999999873
No 122
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.08 E-value=0.0022 Score=52.79 Aligned_cols=72 Identities=19% Similarity=0.184 Sum_probs=49.1
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+++....- +. . . -++-.+.+|....+.| +.
T Consensus 35 ~i~V~~G~tV~~~--N~d---~~~H~v~~~~~~~-------~~-------~-------~-~~s~~l~~g~~~~~tf--~~ 85 (106)
T 1id2_A 35 EVTIKAGETVYWV--NGE---VMPHNVAFKKGIV-------GE-------D-------A-FRGEMMTKDQAYAITF--NE 85 (106)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTTS-------SS-------S-------C-EECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCcEEEEEeCCCC-------Cc-------c-------c-ccccccCCCCEEEEEe--CC
Confidence 4789999999997 543 3577766543210 00 0 0 1233467887777666 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|+|-+ |. ||.+.+.|+
T Consensus 86 ~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 86 AGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--CC--CCEEEEEEC
Confidence 9999999987 76 999999873
No 123
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.93 E-value=0.0032 Score=54.05 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=49.7
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|+|+ |.+ ...|-+++.... .|. .. -++-.+.+|+...+.| +.
T Consensus 61 ~i~V~~GdtV~~~--N~d---~~~H~v~~~~~~-------~g~--------------~~-~~s~~l~pG~t~~~tF--~~ 111 (132)
T 3c75_A 61 EVTIKAGETVYWV--NGE---VMPHNVAFKKGI-------VGE--------------DA-FRGEMMTKDQAYAITF--NE 111 (132)
T ss_dssp EEEECTTCEEEEE--ECS---SSCBCCEECTTT-------SSS--------------SC-EECCCBCTTEEEEEEE--CS
T ss_pred EEEECCCCEEEEE--ECC---CCceEEEEeCCC-------CCc--------------cc-ccccccCCCCEEEEEc--CC
Confidence 4789999999986 543 357877764321 000 01 1233467888777666 79
Q ss_pred ceeeEEEeechhhhhcccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||.|.|||-+ |. ||...+.|+
T Consensus 112 ~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 112 AGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp CEEEEEECSS--CT--TCEEEEEEC
T ss_pred CEEEEEEeCC--Cc--CCEEEEEEC
Confidence 9999999986 76 999999873
No 124
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=96.92 E-value=0.0066 Score=50.99 Aligned_cols=88 Identities=10% Similarity=0.126 Sum_probs=54.2
Q ss_pred CCCcEEEEec-CCEEEEEEEeCCCcC-----eeEEe-----------cCcccCCC-cCC-CCCCCc--CccccCCCCeEE
Q 008592 65 FPGPRIIARE-GDRLLIRVINNVKYN-----VTIHW-----------HGVRQLRS-GWA-DGPAYV--TQCPIQTGQSYV 123 (560)
Q Consensus 65 ~pGP~i~~~~-Gd~v~v~~~N~l~~~-----~~iH~-----------HG~~~~~~-~~~-DGv~~~--tq~~i~pG~~~~ 123 (560)
|--..|.|+. |++|+|+|+|....+ +++=+ -|+..-+. .+. .+-+.+ ...-|.||++++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~ 94 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDS 94 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEE
Confidence 3446899986 999999999987432 33221 11211000 101 011111 112379999999
Q ss_pred EEEEEc--ccCcceeEeeccccccccceEeEEEe
Q 008592 124 YNFTVT--GQRGTLFWHAHISWLRATLYGPIIIL 155 (560)
Q Consensus 124 Y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 155 (560)
..|+.+ .++|+|.|.|- +.+ ||.|-++|.
T Consensus 95 vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 95 VTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 999974 27999999999 444 999999983
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.87 E-value=0.0044 Score=52.40 Aligned_cols=74 Identities=15% Similarity=0.238 Sum_probs=48.3
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+..+ ..|-+.++- + ..+.. .. .+.+.+|.... +.++.
T Consensus 22 ~i~V~~GdtV~f~~~~------~~H~v~~~~----------~-~~p~~-~~-----------~~~~~pG~t~~--~tF~~ 70 (123)
T 1paz_A 22 YIKANPGDTVTFIPVD------KGHNVESIK----------D-MIPEG-AE-----------KFKSKINENYV--LTVTQ 70 (123)
T ss_dssp EEEECTTCEEEEEESS------SSCCCEECT----------T-CSCTT-CC-----------CCBCCTTCCEE--EECCS
T ss_pred EEEECCCCEEEEEECC------CCeEEEEec----------c-cCCCC-cc-----------ceecCCCCEEE--EEeCC
Confidence 4789999999987553 245555431 0 00000 00 12234676544 44589
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
||.|.|+|- .|..+||...+.|.++
T Consensus 71 ~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 71 PGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp CEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 999999997 5999999999999763
No 126
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.71 E-value=0.0046 Score=52.26 Aligned_cols=38 Identities=24% Similarity=0.350 Sum_probs=30.8
Q ss_pred eCCCCEEEEEEEecCceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 502 VPSGGWVAIRFLADNPGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 502 vpp~g~v~irf~adnpG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
+.+|....+ .++.||.|.|+|- .|...||...+.|.++
T Consensus 58 ~~pG~t~~~--tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAVV--KFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEEE--ECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEEE--EeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 457776554 4589999999997 5999999999999763
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.62 E-value=0.0079 Score=63.26 Aligned_cols=79 Identities=18% Similarity=0.281 Sum_probs=61.6
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
..+.++.|+.|+|++.|........|.|-+.+... -+.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 35789999999999999532124678887765432 23577888999999999
Q ss_pred CceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 516 NPGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 516 npG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
.||.|.+||...-|. +.+|...+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999986664 468999998865
No 128
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.30 E-value=0.018 Score=49.37 Aligned_cols=74 Identities=14% Similarity=0.239 Sum_probs=52.9
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++.++|.. .. |+...+.. |. ..-+.||+.-++.|+. +++|+|+|+|.- .+..
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V~-----Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-VI-----HGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-SC-----EEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-cc-----ceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 33 44433321 11 1346789988888986 899999999953 1222
Q ss_pred ccceEeEEEeC
Q 008592 146 ATLYGPIIILP 156 (560)
Q Consensus 146 ~Gl~G~liV~~ 156 (560)
.+|.|-++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 68999998863
No 129
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.27 E-value=0.023 Score=50.53 Aligned_cols=74 Identities=14% Similarity=0.252 Sum_probs=55.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++.++|. +..++...-++.. +.-+.||+..+..|.. +++|+|++.|.- .|..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lgi-------------k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTNI-------------NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSSC-------------EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCCe-------------EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 579999999999999997 4443333322211 1335789988999987 899999999983 4444
Q ss_pred ccceEeEEEeC
Q 008592 146 ATLYGPIIILP 156 (560)
Q Consensus 146 ~Gl~G~liV~~ 156 (560)
++|.|-++|++
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 79999999974
No 130
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.19 E-value=0.0083 Score=53.36 Aligned_cols=89 Identities=8% Similarity=0.082 Sum_probs=60.3
Q ss_pred EEe-cCCCEEEEEEeeCCcC--ccCCCceeecCcceEEEEeCC-----------C--CCCCCCCCCCCCCCCCCccceeE
Q 008592 438 VVL-PFNASVEVVMQDTSII--VAESHPLHLHGFNFFVVAQGF-----------G--NFDPNKDPAKFNLVDPAERNTVG 501 (560)
Q Consensus 438 ~~~-~~g~~ve~~i~N~~~~--~~~~HP~HlHG~~F~Vl~~~~-----------g--~~~~~~~~~~~~~~~p~~rDTv~ 501 (560)
+.+ +.|+.|.|++.|.+.. ..+.|- |-+...+. + .|-+.. ..-....+..
T Consensus 60 itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~~~~~v~~~~m~~~~~~~v~~~-------d~~vl~~t~~ 125 (167)
T 3ay2_A 60 IQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAEDMDGVFKDGVGAADTDYVKPD-------DARVVAHTKL 125 (167)
T ss_dssp EEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGGGHHHHHHHHGGGGGGTTSCTT-------CTTEEEECCC
T ss_pred EEEecCCCEEEEEEEECCCCccccccce-------EEeccCcchhhhHHHhhhcccccccccc-------ccchhcccee
Confidence 788 8999999999997531 012344 43333210 0 000000 0012344667
Q ss_pred eCCCCEEEEEEEec--CceeeEEEeechhhhhcccEEEEEEc
Q 008592 502 VPSGGWVAIRFLAD--NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 502 vpp~g~v~irf~ad--npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|.||+...|.|.++ .||.|-|+|-+--|.. ||-..+.|.
T Consensus 126 l~pGet~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 126 IGGGEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp BCTTCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred eCCCCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 89999999999987 8999999999999988 999999885
No 131
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.13 E-value=0.025 Score=48.48 Aligned_cols=70 Identities=21% Similarity=0.319 Sum_probs=51.9
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|+|++.|.. ..|. |.|-+. + --+.+.||....+.|.++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~--------------~-------~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGT--------------N-------INVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTS--------------S-------CEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCC--------------C-------ceeEeCCCCcEEEEEEcCCC
Confidence 78999999999998842 3444 433110 0 02456778888899999999
Q ss_pred eeeEEEeec---hhhhhcccEEEEEEc
Q 008592 518 GVWFMHCHL---EVHTSWGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHi---l~H~d~GMm~~~~V~ 541 (560)
|.|.++|.. ..| .+|-..+.|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5898888875
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=96.03 E-value=0.019 Score=48.32 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=46.8
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|++|.|+..+ ..|-+++... .+... . ..+.+.+|+...+.| +.
T Consensus 22 ~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~~--~-----------~~~~~~~g~t~~~tF--~~ 70 (122)
T 2ux6_A 22 SLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPDG--A-----------EAFKSKINENYKVTF--TA 70 (122)
T ss_dssp EEEECTTEEEEEEESS------SSCCCEECTT----------CSCTT--C-----------CCCBCCTTCCEEEEE--CS
T ss_pred EEEECCCCEEEEEECC------CCcEEEEccc----------ccCCC--c-----------ceeecCCCCEEEEEe--CC
Confidence 4789999999997432 2566665531 11000 0 012235677655555 89
Q ss_pred ceeeEEEeechhhhhcccEEEEEEcCC
Q 008592 517 PGVWFMHCHLEVHTSWGLKMAWIVNDG 543 (560)
Q Consensus 517 pG~w~~HCHil~H~d~GMm~~~~V~~~ 543 (560)
||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 71 ~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 71 PGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp CEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 9999999976 766 9999999763
No 133
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.79 E-value=0.018 Score=48.95 Aligned_cols=95 Identities=14% Similarity=0.154 Sum_probs=61.1
Q ss_pred EEEecCC-CEEEEEEeeCCcCc--cCCCceeecCcceEEEEeCCCCCCCC-----CCCCCCCC---CCC-CccceeEeCC
Q 008592 437 VVVLPFN-ASVEVVMQDTSIIV--AESHPLHLHGFNFFVVAQGFGNFDPN-----KDPAKFNL---VDP-AERNTVGVPS 504 (560)
Q Consensus 437 ~~~~~~g-~~ve~~i~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g~~~~~-----~~~~~~~~---~~p-~~rDTv~vpp 504 (560)
.+.++.| +.|.+++.|.+... .+.|- |-+...+. ++.. ......++ .++ ....+..|.|
T Consensus 19 ~i~V~~G~~~vtv~~~N~g~~~~~~m~H~-------~vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~p 89 (129)
T 1cuo_A 19 SISVPASCAEFTVNFEHKGHMPKTGMGHN-------WVLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGG 89 (129)
T ss_dssp EEEEETTCSEEEEEEEECSSSCHHHHCBC-------CEEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCT
T ss_pred eEEEcCCCeEEEEEEEECCCCcccccccc-------eEEecCcc--hhhhHHHhhhccccccccccccccceeeeeEECC
Confidence 4789999 99999999975311 12354 43333220 0000 00000000 001 1234667899
Q ss_pred CCEEEEEEEec---CceeeEEEeechhhhhcccEEEEEEc
Q 008592 505 GGWVAIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 505 ~g~v~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
|+...+.|.++ .||.|-|.|-+--|.. ||-..+.|+
T Consensus 90 Get~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 90 GEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 99999999997 9999999999988988 899999885
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=95.04 E-value=0.066 Score=45.45 Aligned_cols=43 Identities=16% Similarity=0.204 Sum_probs=37.7
Q ss_pred ceeEeCCCCEEEEEEEec--Ccee-eEEEeechhhhhcccEEEEEEc
Q 008592 498 NTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 498 DTv~vpp~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.+..|.||+...|.|.++ .||. |-|.|-+--|.. ||-..+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 456789999999999998 7866 999999999988 899999885
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.89 E-value=0.086 Score=44.62 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=38.6
Q ss_pred cceeEeCCCCEEEEEEEec--Ccee-eEEEeechhhhhcccEEEEEEc
Q 008592 497 RNTVGVPSGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 497 rDTv~vpp~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 541 (560)
..|..|.||+...+.|.+. .||. |-|.|-+--|.. ||-..+.|.
T Consensus 81 ~~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 81 AHTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp EECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred ccceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 3466789999999999998 8995 999999999988 999999885
No 136
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=94.48 E-value=0.19 Score=44.58 Aligned_cols=72 Identities=19% Similarity=0.307 Sum_probs=55.5
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|+|.+.|. +..|.|-+=.... -+.+.||....+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~----DViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSP----DVIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECS----SSCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecC----CceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCCC
Confidence 7899999999999984 3577665533221 2345678888899999999
Q ss_pred eeeEEEeec-hhhhhcccEEEEEEc
Q 008592 518 GVWFMHCHL-EVHTSWGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHi-l~H~d~GMm~~~~V~ 541 (560)
|.|.+.|.. --+.+.+|...+.|+
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 999999986 445678999999885
No 137
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.25 E-value=0.18 Score=42.63 Aligned_cols=94 Identities=13% Similarity=0.136 Sum_probs=59.4
Q ss_pred EEEe-cCCCEEEEEEeeCCcCc--cCCCceeecCcceEEEEeCCC------CCCCCCCCCCCCCC---CC-CccceeEeC
Q 008592 437 VVVL-PFNASVEVVMQDTSIIV--AESHPLHLHGFNFFVVAQGFG------NFDPNKDPAKFNLV---DP-AERNTVGVP 503 (560)
Q Consensus 437 ~~~~-~~g~~ve~~i~N~~~~~--~~~HP~HlHG~~F~Vl~~~~g------~~~~~~~~~~~~~~---~p-~~rDTv~vp 503 (560)
.+.+ +.|++|.+++.|.+... .+.|-|-| ...+.- .... ....++. ++ ....|..|.
T Consensus 19 ~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~~~~~~~~~m~~---~~~~~~~~~~~~~~~~~t~~l~ 88 (128)
T 1nwp_A 19 DIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEADMQPIATDGLSA---GIDKQYLKDGDARVIAHTKVIG 88 (128)
T ss_dssp EEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGGHHHHHHHHTTT---CGGGTTSCTTCTTEEEECCCBC
T ss_pred EEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccchhhHHHHHhhc---cccccccccccchhheeeeeeC
Confidence 3788 89999999999975310 11354433 322100 0000 0000111 11 123455689
Q ss_pred CCCEEEEEEEec--Ccee-eEEEeechhhhhcccEEEEEEc
Q 008592 504 SGGWVAIRFLAD--NPGV-WFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 504 p~g~v~irf~ad--npG~-w~~HCHil~H~d~GMm~~~~V~ 541 (560)
||+...+.|.+. .||. |-|.|-+--|.. ||-..+.|+
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 89 AGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 999999999997 7876 999999999988 899999873
No 138
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.00 E-value=0.4 Score=40.07 Aligned_cols=96 Identities=14% Similarity=0.203 Sum_probs=58.4
Q ss_pred EEEecC-CCEEEEEEeeCCcCccCCCceeecCcceEEEEeCC--CCC-CC-CCCC-CCC-C-CCCCCccceeEeCCCCEE
Q 008592 437 VVVLPF-NASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGF--GNF-DP-NKDP-AKF-N-LVDPAERNTVGVPSGGWV 508 (560)
Q Consensus 437 ~~~~~~-g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~--g~~-~~-~~~~-~~~-~-~~~p~~rDTv~vpp~g~v 508 (560)
-+.++. |+.|++++.|.+.+ |--.=||.|-+...+. +.. +. ...+ ..| . -+......|..|.||+..
T Consensus 19 ~i~V~~~Ge~V~~~l~N~G~~-----p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~ 93 (125)
T 3fsa_A 19 AITVDKSCKQFTVNLSHPGNL-----PKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKD 93 (125)
T ss_dssp EEEECTTCSEEEEEEECCSSC-----CHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEE
T ss_pred EEEEecCCCEEEEEEEECCcc-----cccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEE
Confidence 377865 99999999997632 1111244555543210 000 00 0000 011 0 012244567789999999
Q ss_pred EEEEEec---CceeeEEEeechhhhhcccEEEEEEc
Q 008592 509 AIRFLAD---NPGVWFMHCHLEVHTSWGLKMAWIVN 541 (560)
Q Consensus 509 ~irf~ad---npG~w~~HCHil~H~d~GMm~~~~V~ 541 (560)
.|.|.+. .+|.|-|-|- -|. ||-..+.|+
T Consensus 94 ~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 94 SVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp EEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred EEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 9999987 8999999999 888 999999873
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=61.42 E-value=66 Score=26.33 Aligned_cols=80 Identities=9% Similarity=0.118 Sum_probs=52.4
Q ss_pred eeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCC---cCccccCCCCeEEEEEEEcc-
Q 008592 55 TKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAY---VTQCPIQTGQSYVYNFTVTG- 130 (560)
Q Consensus 55 ~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~---~tq~~i~pG~~~~Y~~~~~~- 130 (560)
...+...|-+--.=+|+...|.+..+.|.+...+ ..| .|+||-.. +....|+||++.+|+...++
T Consensus 21 ~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~---~Vw--------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~ 89 (120)
T 3isy_A 21 KFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHK---ERY--------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEV 89 (120)
T ss_dssp EEEEEEEECSSSCEEEEESSSCCEEEEEECTTCC---EEE--------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSC
T ss_pred EEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCC---EEE--------EccccchhhhhhceEEECCCCEEEEEEEeCCC
Confidence 3334444544434578888888888888875432 111 35777542 23455999999999999863
Q ss_pred -cCcceeEeecccccc
Q 008592 131 -QRGTLFWHAHISWLR 145 (560)
Q Consensus 131 -~~Gt~wYH~H~~~~~ 145 (560)
.+|+|..+.-.-++.
T Consensus 90 ~~pG~Ytl~a~l~~~~ 105 (120)
T 3isy_A 90 PEPGTYEVKVTFKGRA 105 (120)
T ss_dssp CCSEEEEEEEEECCEE
T ss_pred CCCccEEEEEEEEeee
Confidence 589998887654443
No 140
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=61.13 E-value=23 Score=32.08 Aligned_cols=73 Identities=14% Similarity=-0.024 Sum_probs=51.1
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|+.|++.|++.. .- ||..++.- + .+.-+-||..-...|.+ +++|+|+..|.- .|..
T Consensus 41 n~l~lP~g~~V~~~lTS~D-Vi-----HSF~IP~l-------g-vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-VM-----HSFFIPRL-------G-SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-SC-----EEEEEGGG-------T-EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecCC-ce-----eeEEeccc-------C-cEEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 4799999999999999863 23 33333211 0 11334678888888886 899999999873 3333
Q ss_pred ccceEeEEEe
Q 008592 146 ATLYGPIIIL 155 (560)
Q Consensus 146 ~Gl~G~liV~ 155 (560)
+.|.+-++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 6788888887
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=60.21 E-value=27 Score=31.58 Aligned_cols=73 Identities=18% Similarity=0.266 Sum_probs=52.6
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|++.+.+.. ..|.|-+=..-. -+.+-||....+.|.++.
T Consensus 42 ~l~lP~g~~V~~~lTS~D----ViHSF~IP~lgv----------------------------K~daiPGr~n~l~~~~~~ 89 (205)
T 1cyx_A 42 EIAFPANTPVYFKVTSNS----VMHSFFIPRLGS----------------------------QIYAMAGMQTRLHLIANE 89 (205)
T ss_dssp EEEEETTSCEEEEEEESS----SCEEEEEGGGTE----------------------------EEEECTTCCEEEEECCSS
T ss_pred eEEEeCCCEEEEEEecCC----ceeeEEecccCc----------------------------EEEecCCceEEEEEEeCC
Confidence 478999999999999853 566655543322 233446777888999999
Q ss_pred ceeeEEEeechhhhh-cccEEEEEEc
Q 008592 517 PGVWFMHCHLEVHTS-WGLKMAWIVN 541 (560)
Q Consensus 517 pG~w~~HCHil~H~d-~GMm~~~~V~ 541 (560)
||.|...|-.+-... ..|-..++|.
T Consensus 90 pG~y~g~CsE~CG~~Hs~M~~~v~vv 115 (205)
T 1cyx_A 90 PGTYDGICAEICGPGHSGMKFKAIAT 115 (205)
T ss_dssp SEEEEEEECSCCSTTSTTCCEEEEEE
T ss_pred CeEEEEEcccccccchhhceEEEEEE
Confidence 999999998876554 4555666665
No 142
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=59.63 E-value=19 Score=34.73 Aligned_cols=75 Identities=20% Similarity=0.242 Sum_probs=54.5
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|++.+.+.. ..|.|.+=....+ +.+-||....+.|.++.
T Consensus 190 ~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~k----------------------------~daiPG~~n~~~~~~~~ 237 (298)
T 3hb3_B 190 PVVVPVGKKVLVQVTATD----VIHAWTIPAFAVK----------------------------QDAVPGRIAQLWFSVDQ 237 (298)
T ss_dssp CEEEESSSEEEEEEEESS----SCEEEEEGGGTEE----------------------------EEECTTCCEEEEEECSS
T ss_pred eEEEEcCCEEEEEEEeCC----ccceeeEcccCce----------------------------EEecCCceEEEEEEeCC
Confidence 478999999999999853 5777666433322 23446777789999999
Q ss_pred ceeeEEEeechhh-hhcccEEEEEEcCC
Q 008592 517 PGVWFMHCHLEVH-TSWGLKMAWIVNDG 543 (560)
Q Consensus 517 pG~w~~HCHil~H-~d~GMm~~~~V~~~ 543 (560)
||.|...|.-+-- -+..|-..++|.+.
T Consensus 238 ~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 238 EGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 9999999987653 34666667777543
No 143
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=54.78 E-value=12 Score=31.18 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=38.8
Q ss_pred ceEEEEEEEEEEEeee---cCceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCe---eEEecCcccCCCc---CCC
Q 008592 36 ITRHYKFHIKMQNITR---LCQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNV---TIHWHGVRQLRSG---WAD 106 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~---~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~---~iH~HG~~~~~~~---~~D 106 (560)
.+..+++++....+.- ....+.+|+| .|++.|....+. +=||.=....+.- ..+
T Consensus 5 ~t~~I~V~V~~~y~~e~S~p~~~~y~faY-----------------~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~ 67 (127)
T 2f1e_A 5 PRYRVEVEVSPRFLAHQSTPDEGRYAFAY-----------------SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGE 67 (127)
T ss_dssp -CCCEEEEEEEEECSTTCBGGGTBEEEEE-----------------EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEES
T ss_pred eECCEEEEEEEEEchhhCCCcCCEEEEEE-----------------EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECC
Confidence 3444555555544321 1235667776 466677776543 4466632221110 145
Q ss_pred CCCCcCccccCCCCeEEEEE
Q 008592 107 GPAYVTQCPIQTGQSYVYNF 126 (560)
Q Consensus 107 Gv~~~tq~~i~pG~~~~Y~~ 126 (560)
||-| .|.-|.||++|.|.=
T Consensus 68 GVVG-~qP~L~PGe~f~YtS 86 (127)
T 2f1e_A 68 GVVG-EQPWLRPGEAFHYTS 86 (127)
T ss_dssp SBTT-BCCEECTTCEEEEEE
T ss_pred Ceec-CCCcCCCCCceEEeC
Confidence 6644 356689999888843
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=54.10 E-value=25 Score=33.21 Aligned_cols=74 Identities=19% Similarity=0.281 Sum_probs=52.9
Q ss_pred EEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecC
Q 008592 437 VVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADN 516 (560)
Q Consensus 437 ~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adn 516 (560)
.+.++.|+.|++.+.+.. ..|.|-+=....+ +.+-||....+.|.++.
T Consensus 172 ~l~lP~g~~v~~~~tS~D----ViHsf~ip~l~~k----------------------------~da~PG~~n~~~~~~~~ 219 (262)
T 2gsm_B 172 AMVVPVNKTVVVQVTGAD----VIHSWTVPAFGVK----------------------------QDAVPGRLAQLWFRAER 219 (262)
T ss_dssp CEEEETTSEEEEEEEESS----SCEEEEEGGGTEE----------------------------EEECBTCCEEEEEECCS
T ss_pred eEEEecCCEEEEEEEECc----ccceeeecccCce----------------------------EEecCCceeEEEEecCC
Confidence 478999999999999853 5666665433322 22346677788999999
Q ss_pred ceeeEEEeechhhh-hcccEEEEEEcC
Q 008592 517 PGVWFMHCHLEVHT-SWGLKMAWIVND 542 (560)
Q Consensus 517 pG~w~~HCHil~H~-d~GMm~~~~V~~ 542 (560)
||.|...|--+--. +..|-..++|.+
T Consensus 220 ~G~y~g~Cse~CG~~H~~M~~~v~vv~ 246 (262)
T 2gsm_B 220 EGIFFGQCSELCGISHAYMPITVKVVS 246 (262)
T ss_dssp CEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred cEEEEEEChHhcccCcccCeEEEEEEc
Confidence 99999999876544 345666666654
No 145
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=54.06 E-value=27 Score=34.22 Aligned_cols=17 Identities=18% Similarity=0.479 Sum_probs=14.6
Q ss_pred ccccCCCCeEEEEEEEc
Q 008592 113 QCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 113 q~~i~pG~~~~Y~~~~~ 129 (560)
..||+|||+.+.+..+.
T Consensus 319 ~~pI~PGETr~~~v~a~ 335 (382)
T 1yew_A 319 NSPLAPGETRTVDVTAS 335 (382)
T ss_dssp CSCBCTTCEEEEEEEEE
T ss_pred CCCcCCCceeEEEEEee
Confidence 46799999999998873
No 146
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=52.50 E-value=12 Score=31.24 Aligned_cols=73 Identities=18% Similarity=0.168 Sum_probs=39.0
Q ss_pred ceEEEEEEEEEEEeee--c-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCe---eEEecCcccCCCc---CCC
Q 008592 36 ITRHYKFHIKMQNITR--L-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNV---TIHWHGVRQLRSG---WAD 106 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~--~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~---~iH~HG~~~~~~~---~~D 106 (560)
.+..+++++....+.- + ...+.+|+| .|++.|....+. +=||.=....+.- ..+
T Consensus 4 ~t~~I~V~V~~~y~~e~S~p~~~~y~faY-----------------~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~ 66 (126)
T 1xvs_A 4 SLPCIKIQVQTRYIEEQSNPEYQRFVFAY-----------------LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGD 66 (126)
T ss_dssp SCCCEEEEEEEEECGGGCBGGGTBEEEEE-----------------EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEE
T ss_pred ccCCEEEEEEEEEchhcCCCcCCEEEEEE-----------------EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECC
Confidence 3444555565544331 1 245667776 466677766543 3466532211110 035
Q ss_pred CCCCcCccccCCCCeEEEEE
Q 008592 107 GPAYVTQCPIQTGQSYVYNF 126 (560)
Q Consensus 107 Gv~~~tq~~i~pG~~~~Y~~ 126 (560)
||-| .|.-|.||++|.|.=
T Consensus 67 GVVG-~qP~L~PGe~f~YtS 85 (126)
T 1xvs_A 67 GVVG-EQPRIKANDEYTYSS 85 (126)
T ss_dssp SBTT-BCCEECTTCEEEEEE
T ss_pred ceEc-CCCcCCCCCceEEeC
Confidence 5544 356689999888753
No 147
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=51.04 E-value=34 Score=28.38 Aligned_cols=69 Identities=20% Similarity=0.337 Sum_probs=38.6
Q ss_pred EEECCCCCCcEEEEecCCEEEEEEE---eCCCcC--eeEE--ecCcccCCC-cCCCCCCCcCccccCCCCeEEEEEEE
Q 008592 59 VTVNGQFPGPRIIAREGDRLLIRVI---NNVKYN--VTIH--WHGVRQLRS-GWADGPAYVTQCPIQTGQSYVYNFTV 128 (560)
Q Consensus 59 ~~~ng~~pGP~i~~~~Gd~v~v~~~---N~l~~~--~~iH--~HG~~~~~~-~~~DGv~~~tq~~i~pG~~~~Y~~~~ 128 (560)
..++|--+.+.=.+++|+.+.|.+. |..... +.+| ..|+..+.. ...|+=-+ +.|||.+|+.++|.+..
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 3444431334566888988887776 222222 2233 235444321 11333222 56999999999999776
No 148
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=49.96 E-value=29 Score=28.86 Aligned_cols=70 Identities=20% Similarity=0.235 Sum_probs=39.2
Q ss_pred EEECCCCCCcEEEEecCCEEEEEEE---eCCCcCeeEEe----cCcccCC-CcCCCCCCCcCccccCCCCeEEEEEEEc
Q 008592 59 VTVNGQFPGPRIIAREGDRLLIRVI---NNVKYNVTIHW----HGVRQLR-SGWADGPAYVTQCPIQTGQSYVYNFTVT 129 (560)
Q Consensus 59 ~~~ng~~pGP~i~~~~Gd~v~v~~~---N~l~~~~~iH~----HG~~~~~-~~~~DGv~~~tq~~i~pG~~~~Y~~~~~ 129 (560)
..++|- +.+.=.+++|+.+.|.+. |.......... -|+..+. ....|+=..-+.|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 344443 235666888988888776 22222222222 3444421 1113432212469999999999988774
No 149
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=47.34 E-value=17 Score=30.75 Aligned_cols=73 Identities=12% Similarity=0.134 Sum_probs=38.9
Q ss_pred ceEEEEEEEEEEEeee--c-CceeEEEEECCCCCCcEEEEecCCEEEEEEEeCCCcCe---eEEecCcccCCCc---CCC
Q 008592 36 ITRHYKFHIKMQNITR--L-CQTKSIVTVNGQFPGPRIIAREGDRLLIRVINNVKYNV---TIHWHGVRQLRSG---WAD 106 (560)
Q Consensus 36 ~~~~~~l~~~~~~~~~--~-g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~---~iH~HG~~~~~~~---~~D 106 (560)
.+..+++++....+.- + ...+.+|+| .|++.|....+. +=||.=....+.- ..+
T Consensus 9 tT~gI~V~V~~~y~~e~S~p~~~~y~FaY-----------------~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~ 71 (139)
T 1xq4_A 9 KPYDLTVSVTPRYVPEQSDPSQQQYVFAY-----------------TVRITNTGSHPAQVISRHWIITDGEERVQEVRGL 71 (139)
T ss_dssp CSSCEEEEEEEEECGGGCBGGGTBEEEEE-----------------EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEE
T ss_pred ccCCEEEEEEEEEchhhCCCCCCEEEEEE-----------------EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECC
Confidence 3444555565544331 1 245667776 466677766543 3466532211110 135
Q ss_pred CCCCcCccccCCCCeEEEEE
Q 008592 107 GPAYVTQCPIQTGQSYVYNF 126 (560)
Q Consensus 107 Gv~~~tq~~i~pG~~~~Y~~ 126 (560)
||-| .|.-|.||++|.|.=
T Consensus 72 GVVG-eqPvL~PGe~F~YtS 90 (139)
T 1xq4_A 72 GVVG-QQPLLAPGETFEYTS 90 (139)
T ss_dssp SSSS-CCCEECTTCEEEEEE
T ss_pred Ceec-CCCcCCCCCceEEcC
Confidence 5544 356689999888853
No 150
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=45.49 E-value=29 Score=32.79 Aligned_cols=75 Identities=9% Similarity=0.082 Sum_probs=51.3
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++.+++.. .-++...-.+... +| +-||..-...|.+ +++|+|+..|.- .|..
T Consensus 171 n~l~lP~g~~v~~~~tS~D-ViHsf~ip~l~~k----~d---------a~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-VIHSWTVPAFGVK----QD---------AVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-SCEEEEEGGGTEE----EE---------ECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc-ccceeeecccCce----EE---------ecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 4699999999999999863 3333333322221 23 4568888888886 899999998873 3333
Q ss_pred ccceEeEEEeCC
Q 008592 146 ATLYGPIIILPK 157 (560)
Q Consensus 146 ~Gl~G~liV~~~ 157 (560)
+.|.+.++|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 678777777654
No 151
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=44.02 E-value=15 Score=30.80 Aligned_cols=47 Identities=21% Similarity=0.193 Sum_probs=25.8
Q ss_pred EEEEEeCCCcCe---eEEecCcccCCCc---CCCCCCCcCccccCCCCeEEEEE
Q 008592 79 LIRVINNVKYNV---TIHWHGVRQLRSG---WADGPAYVTQCPIQTGQSYVYNF 126 (560)
Q Consensus 79 ~v~~~N~l~~~~---~iH~HG~~~~~~~---~~DGv~~~tq~~i~pG~~~~Y~~ 126 (560)
.|++.|....+. +=||.=....+.- ..+||-| .|.-|.||++|+|.=
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-eqP~L~PGe~F~YtS 85 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQGAGVVG-ETPTIPPNTAYQYTS 85 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEEESBTT-BCCEECTTEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEcCceEc-CCCcCCCCCceEEcC
Confidence 466677766543 3466532211110 0355544 356689999888853
No 152
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=43.18 E-value=36 Score=32.81 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=52.0
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..|.+..|++|++.+++.. .-++...-.+... +| .-||..-...|.+ +++|+|+..|.- .|..
T Consensus 189 N~lvlP~g~~V~~~ltS~D-ViHsf~iP~lg~k----~d---------aiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD-VIHAWTIPAFAVK----QD---------AVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEESS-SCEEEEEGGGTEE----EE---------ECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeCC-ccceeeEcccCce----EE---------ecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 5799999999999999853 2333322222211 22 4578888888886 899999999883 3433
Q ss_pred ccceEeEEEeCCC
Q 008592 146 ATLYGPIIILPKQ 158 (560)
Q Consensus 146 ~Gl~G~liV~~~~ 158 (560)
+.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 6787777777653
No 153
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=39.21 E-value=84 Score=30.90 Aligned_cols=16 Identities=25% Similarity=0.289 Sum_probs=13.6
Q ss_pred cccCCCCeEEEEEEEc
Q 008592 114 CPIQTGQSYVYNFTVT 129 (560)
Q Consensus 114 ~~i~pG~~~~Y~~~~~ 129 (560)
..|+||++.+.+|.+.
T Consensus 95 ~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVS 110 (343)
T ss_dssp EEECTTCEEEEEEECT
T ss_pred EEeCCCCeEEEEEehh
Confidence 4589999999999984
No 154
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=34.87 E-value=69 Score=31.81 Aligned_cols=133 Identities=17% Similarity=0.153 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhccCceEEEEEEEEEEEee--------------ecCceeEEEEECCCCCCcEEEEecCCEE
Q 008592 13 RATFLGFFALWILSELALAKHEGITRHYKFHIKMQNIT--------------RLCQTKSIVTVNGQFPGPRIIAREGDRL 78 (560)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------------~~g~~~~~~~~ng~~pGP~i~~~~Gd~v 78 (560)
|...+++++..++.-....+.+....-+++-++..... +.-+..++..-+=+.||=+++++
T Consensus 229 rkv~~~~~~~tlv~v~~gy~~t~~~yP~tiPlQag~~~~i~Pl~~~~~~~~~~~~V~~~v~~A~Y~vpgR~l~~~----- 303 (419)
T 3rfr_A 229 RRIGAIVLALTILATIVGYAVTNSTFPRTIPLQAGLQKPLTPIETEGTVGVGKEQVTTELNGGVYKVPGRELTIN----- 303 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCSCCCCCCSCCSCCCCCCSSCSTTCSSCCCEEEEEEEEEESSSSEEEEE-----
T ss_pred ceeehhHHHHHHHHHHHHHHhhhhcCCCccccccccccCCccCccccccCCCCCceEEEEeceEEecCCcEEEEE-----
Q ss_pred EEEEEeCCCc--------CeeEEecCcccCCCc--CCC------CCCCcCccccCCCCeEEEEEEEccc-----------
Q 008592 79 LIRVINNVKY--------NVTIHWHGVRQLRSG--WAD------GPAYVTQCPIQTGQSYVYNFTVTGQ----------- 131 (560)
Q Consensus 79 ~v~~~N~l~~--------~~~iH~HG~~~~~~~--~~D------Gv~~~tq~~i~pG~~~~Y~~~~~~~----------- 131 (560)
++|+|+.++ ..+++|-.-.+.... +.| |.- -.. ||+|||+.+.+..+.+.
T Consensus 304 -~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~da~WeveRL~~l~ 380 (419)
T 3rfr_A 304 -VKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQDARWDIERLSDLA 380 (419)
T ss_dssp -EEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEECHHHHHTTGGGGG
T ss_pred -EEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeehHHHHHHHHhhhh
Q ss_pred -------CcceeEeecccccc-ccceEeEE
Q 008592 132 -------RGTLFWHAHISWLR-ATLYGPII 153 (560)
Q Consensus 132 -------~Gt~wYH~H~~~~~-~Gl~G~li 153 (560)
.|.+++.+-.+..+ .-+.|++|
T Consensus 381 ~D~dSrfgGLLfF~d~~G~r~i~~I~~pvI 410 (419)
T 3rfr_A 381 YDTDSQVGGLLFFFTPDGKRFAAEIGGPVI 410 (419)
T ss_dssp GSSSCEEEEEEEEECSSSCEEEEEEEEECE
T ss_pred cCchhheeEEEEEEcCCCCEEEEeccCccc
No 155
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=34.44 E-value=94 Score=28.54 Aligned_cols=75 Identities=12% Similarity=0.273 Sum_probs=52.2
Q ss_pred EEEEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEec
Q 008592 436 KVVVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLAD 515 (560)
Q Consensus 436 ~~~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~ad 515 (560)
+.+.++.|+.|++.+.+.. ..|.|-+=..-.++ ..-||....+.|.++
T Consensus 140 n~lvlP~~~~Vr~~vtS~D----ViHsf~vP~lg~K~----------------------------DaiPGr~n~~~~~~~ 187 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED----VLHSWAVPSLGLKT----------------------------DAIPGRLNQTTLMSS 187 (227)
T ss_dssp SCEEEETTSCEEEEEEESS----SCEEEEEGGGTEEE----------------------------EECTTCCEEEEECCS
T ss_pred ceEEEecCCEEEEEEEeCc----ccceeeecccCcEE----------------------------EecCCceEEEEEecC
Confidence 3478999999999998843 56666654333222 233566777889999
Q ss_pred CceeeEEEeechhhhh-cccEEEEEEcC
Q 008592 516 NPGVWFMHCHLEVHTS-WGLKMAWIVND 542 (560)
Q Consensus 516 npG~w~~HCHil~H~d-~GMm~~~~V~~ 542 (560)
.||.|...|.-+-... .-|-..++|.+
T Consensus 188 ~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 188 RPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CcEEEEEEehhhcccccccCeEEEEEEc
Confidence 9999999998765543 44555666654
No 156
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=30.90 E-value=52 Score=30.29 Aligned_cols=75 Identities=8% Similarity=-0.002 Sum_probs=49.8
Q ss_pred cEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEEcccCcceeEeecc-cccc-
Q 008592 68 PRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTVTGQRGTLFWHAHI-SWLR- 145 (560)
Q Consensus 68 P~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~~~~~Gt~wYH~H~-~~~~- 145 (560)
..+.+..|+.|++.++... .-++...-.+... +|. -||..-...|.+ +++|+|+..|.- .|..
T Consensus 140 n~lvlP~~~~Vr~~vtS~D-ViHsf~vP~lg~K----~Da---------iPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED-VLHSWAVPSLGLK----TDA---------IPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEESS-SCEEEEEGGGTEE----EEE---------CTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeCc-ccceeeecccCcE----EEe---------cCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 5799999999999999853 3333333333222 343 467777778886 899999998873 3333
Q ss_pred ccceEeEEEeCC
Q 008592 146 ATLYGPIIILPK 157 (560)
Q Consensus 146 ~Gl~G~liV~~~ 157 (560)
+.|.+.+.+.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 567666666544
No 157
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=24.08 E-value=88 Score=24.71 Aligned_cols=52 Identities=12% Similarity=0.086 Sum_probs=32.6
Q ss_pred EEEEEEEeCCCcC---eeEEecCcccCCCcCCCCCCCcCccccCCCCeEEEEEEE-cccCcc
Q 008592 77 RLLIRVINNVKYN---VTIHWHGVRQLRSGWADGPAYVTQCPIQTGQSYVYNFTV-TGQRGT 134 (560)
Q Consensus 77 ~v~v~~~N~l~~~---~~iH~HG~~~~~~~~~DGv~~~tq~~i~pG~~~~Y~~~~-~~~~Gt 134 (560)
.++|.++|-|+.+ ..++.-|.-.. ++ --+....|.||++.++++.. |..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccc
Confidence 6778999999864 45666663221 11 01112458999999988887 344554
No 158
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=22.09 E-value=93 Score=30.15 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=51.0
Q ss_pred EEecCCCEEEEEEeeCCcCccCCCceeecCcceEEEEeCCCCCCCCCCCCCCCCCCCCccceeEeCCCCEEEEEEEecCc
Q 008592 438 VVLPFNASVEVVMQDTSIIVAESHPLHLHGFNFFVVAQGFGNFDPNKDPAKFNLVDPAERNTVGVPSGGWVAIRFLADNP 517 (560)
Q Consensus 438 ~~~~~g~~ve~~i~N~~~~~~~~HP~HlHG~~F~Vl~~~~g~~~~~~~~~~~~~~~p~~rDTv~vpp~g~v~irf~adnp 517 (560)
+.++.|+.|++.+.+. +..|.|.+=....+ +.+-||-...+.|.++.|
T Consensus 153 l~lP~g~~V~~~lTS~----DViHsf~IP~lg~k----------------------------~DaiPGr~n~~~~~~~~~ 200 (315)
T 1fft_B 153 IAFPANTPVYFKVTSN----SVMNSFFIPRLGSQ----------------------------IYAMAGMQTRLHLIANEP 200 (315)
T ss_dssp CCCCSSSEEEEEECBS----SSCEEEEEGGGTEE----------------------------EEECBTSCEEEEEECCSC
T ss_pred EEEeCCCEEEEEEEeC----CccceeeecccCcE----------------------------EeecCCcceeeEEecCCC
Confidence 6788999999999874 35676665433332 223466777889999999
Q ss_pred eeeEEEeechhhhh-cccEEEEEEc
Q 008592 518 GVWFMHCHLEVHTS-WGLKMAWIVN 541 (560)
Q Consensus 518 G~w~~HCHil~H~d-~GMm~~~~V~ 541 (560)
|.|...|--+--.. ..|-..++|.
T Consensus 201 G~y~g~CsE~CG~~Hs~M~~~v~vv 225 (315)
T 1fft_B 201 GTYDGISASYSGPGFSGMKFKAIAT 225 (315)
T ss_dssp BCCEEBCCSCCSTTTTTCCEECCBC
T ss_pred eEEEEeccccchhhHHhccceEEEe
Confidence 99999998766554 4455566665
No 159
>3b9t_A Twin-arginine translocation pathway signal protei; YP_546212.1, predicted acetamidase/formamidase, acetamidase/formamidase family; 1.58A {Methylobacillus flagellatus KT}
Probab=21.94 E-value=34 Score=35.29 Aligned_cols=28 Identities=14% Similarity=0.162 Sum_probs=21.3
Q ss_pred eeEEEE-ECCCCCCcEEEEecCCEEEEEEE
Q 008592 55 TKSIVT-VNGQFPGPRIIAREGDRLLIRVI 83 (560)
Q Consensus 55 ~~~~~~-~ng~~pGP~i~~~~Gd~v~v~~~ 83 (560)
....|+ |+...| |.++|+.||+|+|.-.
T Consensus 81 ~tv~wg~fs~~~~-PvltV~sGd~V~ieT~ 109 (484)
T 3b9t_A 81 KTVSWGFFSKSLK-PVVELESGDFATIETL 109 (484)
T ss_dssp TTEEESEECTTSC-CSEEECTTCEEEEEEC
T ss_pred CceEeCCcCCCCC-ceEEECCCCEEEEEEe
Confidence 445576 465665 9999999999999754
No 160
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=21.92 E-value=1.1e+02 Score=25.68 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=28.8
Q ss_pred EEe-cCceeeEEEeechhhhhcccEEEEEEcCCC
Q 008592 512 FLA-DNPGVWFMHCHLEVHTSWGLKMAWIVNDGK 544 (560)
Q Consensus 512 f~a-dnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 544 (560)
|.. +.+|.+-|=|=+..|=..||-+.|.|....
T Consensus 77 v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 77 IERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 455 789999999999999999999999997653
No 161
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=21.80 E-value=3.4e+02 Score=22.35 Aligned_cols=21 Identities=19% Similarity=0.324 Sum_probs=17.8
Q ss_pred CcEEEEecCCEEEEEEEeCCC
Q 008592 67 GPRIIAREGDRLLIRVINNVK 87 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~ 87 (560)
|-+|.++.||++.|.|.-+-.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPT 52 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPT 52 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGG
T ss_pred CCEEEEeCCCEEEEEeCCCCC
Confidence 459999999999999986653
No 162
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=21.69 E-value=3.1e+02 Score=21.92 Aligned_cols=67 Identities=15% Similarity=0.063 Sum_probs=36.0
Q ss_pred CcEEEEecCCEEEEEEEeCCCcCeeEEecCcccCCCcCCCCCC----Cc----CccccCCCCeEEEEEEEcccCcc
Q 008592 67 GPRIIAREGDRLLIRVINNVKYNVTIHWHGVRQLRSGWADGPA----YV----TQCPIQTGQSYVYNFTVTGQRGT 134 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~~~~~iH~HG~~~~~~~~~DGv~----~~----tq~~i~pG~~~~Y~~~~~~~~Gt 134 (560)
|-+|.++.||++.|.|.-+-....+=......-...-..+|.- .+ ..-.+..|+...+.|++ .++|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCce
Confidence 4589999999999999866544333333321000000011100 00 00124567888899987 66775
No 163
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=21.51 E-value=3.2e+02 Score=22.03 Aligned_cols=21 Identities=19% Similarity=0.194 Sum_probs=16.4
Q ss_pred CcEEEEecCCEEEEEEEeCCC
Q 008592 67 GPRIIAREGDRLLIRVINNVK 87 (560)
Q Consensus 67 GP~i~~~~Gd~v~v~~~N~l~ 87 (560)
|-+|.++.||++.|.|.-+-.
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPt 32 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPT 32 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCC
Confidence 347999999999999875543
No 164
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=20.67 E-value=2e+02 Score=23.51 Aligned_cols=59 Identities=24% Similarity=0.228 Sum_probs=35.5
Q ss_pred EEEEecC-CEEEEEEEeCCCcCee--EEecCcccCCCcCCC-----C----CCCcCccccCCCCeEEEEEE
Q 008592 69 RIIAREG-DRLLIRVINNVKYNVT--IHWHGVRQLRSGWAD-----G----PAYVTQCPIQTGQSYVYNFT 127 (560)
Q Consensus 69 ~i~~~~G-d~v~v~~~N~l~~~~~--iH~HG~~~~~~~~~D-----G----v~~~tq~~i~pG~~~~Y~~~ 127 (560)
.|++++| +++.++|.|.-+.+.- -|+|=....+.-..| | .|.=|-.-..||++.+-+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5888888 6899999999977654 477765554322122 1 11113344566666665554
No 165
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=20.67 E-value=2e+02 Score=23.51 Aligned_cols=59 Identities=24% Similarity=0.228 Sum_probs=35.5
Q ss_pred EEEEecC-CEEEEEEEeCCCcCee--EEecCcccCCCcCCC-----C----CCCcCccccCCCCeEEEEEE
Q 008592 69 RIIAREG-DRLLIRVINNVKYNVT--IHWHGVRQLRSGWAD-----G----PAYVTQCPIQTGQSYVYNFT 127 (560)
Q Consensus 69 ~i~~~~G-d~v~v~~~N~l~~~~~--iH~HG~~~~~~~~~D-----G----v~~~tq~~i~pG~~~~Y~~~ 127 (560)
.|++++| +++.++|.|.-+.+.- -|+|=....+.-..| | .|.=|-.-..||++.+-+..
T Consensus 18 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 18 EIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp EEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 5888888 6899999999977654 477765554322122 1 11113344566666665554
No 166
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=20.60 E-value=29 Score=28.81 Aligned_cols=23 Identities=17% Similarity=0.172 Sum_probs=18.9
Q ss_pred eEEEccCCEEEEEEEecCCCCeE
Q 008592 222 KLKVTPGKTYLLRMINAALNDEL 244 (560)
Q Consensus 222 ~~~v~~g~~~rlRliN~~~~~~~ 244 (560)
.|.|+.||++||.+.|-+..+.|
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEEEE
Confidence 48999999999999988755544
Done!