Query 008595
Match_columns 560
No_of_seqs 358 out of 2132
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 07:13:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008595.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008595hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3js8_A Cholesterol oxidase; ch 100.0 3.1E-66 1.1E-70 561.9 36.6 449 16-504 14-539 (540)
2 2i0k_A Oxidoreductase; MIX alp 100.0 2.7E-64 9.2E-69 557.0 35.2 452 14-505 18-561 (561)
3 4feh_A Oxidoreductase DPRE1; a 100.0 1.3E-63 4.6E-68 540.9 36.5 436 16-503 28-478 (481)
4 2vfr_A Xylitol oxidase, aldito 100.0 1.1E-59 3.7E-64 504.7 36.0 408 20-506 9-422 (422)
5 2bvf_A 6-hydroxy-D-nicotine ox 100.0 7.3E-37 2.5E-41 330.9 31.5 403 20-499 27-452 (459)
6 4bby_A Alkyldihydroxyacetoneph 100.0 4.6E-36 1.6E-40 337.5 30.5 210 22-235 196-411 (658)
7 3pm9_A Putative oxidoreductase 100.0 7.1E-33 2.4E-37 300.0 24.1 202 22-234 42-253 (476)
8 3tsh_A Pollen allergen PHL P 4 100.0 2E-31 6.8E-36 291.3 34.7 183 23-216 44-231 (500)
9 3rja_A Carbohydrate oxidase; p 100.0 1.9E-30 6.5E-35 281.1 35.6 190 17-217 22-214 (473)
10 3fw9_A Reticuline oxidase; BI- 100.0 1.9E-30 6.4E-35 281.9 32.4 184 22-217 36-223 (495)
11 1w1o_A Cytokinin dehydrogenase 100.0 1.2E-29 4E-34 279.4 38.2 202 21-234 58-271 (534)
12 2y3s_A TAML; oxidoreductase; H 100.0 1.2E-29 4E-34 278.4 35.9 174 21-207 48-232 (530)
13 2exr_A Cytokinin dehydrogenase 100.0 5.8E-30 2E-34 280.7 31.6 203 21-236 51-266 (524)
14 2uuu_A Alkyldihydroxyacetoneph 100.0 6E-30 2E-34 283.2 31.9 202 24-235 130-341 (584)
15 3vte_A Tetrahydrocannabinolic 100.0 1.5E-29 5.1E-34 275.6 31.4 184 23-217 45-231 (518)
16 3pop_A GILR oxidase; FAD bindi 100.0 4.7E-29 1.6E-33 271.5 32.9 180 17-207 20-208 (501)
17 1zr6_A Glucooligosaccharide ox 100.0 8.6E-29 3E-33 270.3 35.0 181 21-214 32-215 (503)
18 2ipi_A Aclacinomycin oxidoredu 100.0 1.9E-28 6.4E-33 268.6 33.9 178 22-212 46-245 (521)
19 2wdx_A Putative hexose oxidase 100.0 3.1E-28 1.1E-32 266.8 33.7 178 22-212 48-247 (523)
20 1e8g_A Vanillyl-alcohol oxidas 100.0 1.5E-26 5.2E-31 255.7 32.8 179 24-214 61-276 (560)
21 1wvf_A 4-cresol dehydrogenase 99.9 1.4E-25 4.9E-30 246.0 23.1 182 22-215 45-245 (520)
22 1f0x_A DLDH, D-lactate dehydro 99.9 4.4E-26 1.5E-30 250.8 16.0 206 22-234 37-298 (571)
23 1hsk_A UDP-N-acetylenolpyruvoy 99.9 1.5E-22 5.1E-27 209.0 11.8 167 20-210 39-209 (326)
24 3tx1_A UDP-N-acetylenolpyruvoy 99.9 4E-22 1.4E-26 204.8 12.5 171 19-212 44-217 (322)
25 1uxy_A MURB, uridine diphospho 99.9 4.4E-21 1.5E-25 198.5 15.7 173 19-213 4-184 (340)
26 3i99_A UDP-N-acetylenolpyruvoy 99.8 2.2E-21 7.5E-26 201.4 11.6 171 19-213 20-200 (357)
27 2gqt_A UDP-N-acetylenolpyruvyl 99.8 6.5E-19 2.2E-23 176.2 11.2 158 19-211 12-173 (268)
28 2yvs_A Glycolate oxidase subun 99.8 2.4E-18 8.1E-23 167.3 11.8 115 93-218 1-122 (219)
29 1ffv_C CUTM, flavoprotein of c 98.2 2.4E-06 8.1E-11 86.2 8.9 159 32-211 5-178 (287)
30 1n62_C Carbon monoxide dehydro 97.5 0.00019 6.4E-09 72.3 7.9 154 32-210 5-177 (288)
31 2w3s_A Xanthine dehydrogenase; 97.4 5.9E-05 2E-09 80.8 3.3 152 33-210 178-346 (462)
32 3nvz_B Xanthine dehydrogenase/ 97.0 0.0017 5.8E-08 65.7 9.4 160 29-209 7-190 (305)
33 1t3q_C Quinoline 2-oxidoreduct 97.0 0.001 3.6E-08 66.7 7.1 153 32-210 5-176 (288)
34 3hrd_C Nicotinate dehydrogenas 95.7 0.0067 2.3E-07 61.1 4.2 107 32-144 3-120 (296)
35 1rm6_B 4-hydroxybenzoyl-COA re 93.5 0.042 1.4E-06 55.9 3.7 102 32-141 6-118 (324)
36 3unc_A Xanthine dehydrogenase/ 92.6 0.18 6.1E-06 60.5 7.8 163 31-210 232-414 (1332)
37 1f0x_A DLDH, D-lactate dehydro 87.1 0.64 2.2E-05 50.9 5.8 100 365-497 456-556 (571)
38 1wvf_A 4-cresol dehydrogenase 80.4 4.3 0.00015 43.6 8.8 109 367-497 394-509 (520)
39 3q8j_A Asteropsin A, ABU8-1; c 78.1 1.1 3.6E-05 28.6 1.7 29 513-541 1-29 (37)
40 3zyv_A AOH1; oxidoreductase, m 73.2 2.1 7E-05 51.6 4.0 78 34-119 242-321 (1335)
41 2gvs_A Chemosensory protein CS 66.5 3.8 0.00013 34.5 3.1 32 470-503 73-104 (109)
42 1k19_A Chemosensory protein CS 61.1 3.6 0.00012 34.8 1.9 36 470-507 71-108 (112)
43 1cix_A Protein (tachystatin A) 43.7 16 0.00055 24.5 2.5 29 514-544 3-39 (44)
44 1rzw_A Protein AF2095(GR4); be 30.1 85 0.0029 26.7 5.7 44 22-67 41-84 (123)
45 1xty_A PTH, peptidyl-tRNA hydr 27.6 90 0.0031 26.3 5.4 43 22-66 47-89 (120)
46 1wn2_A Peptidyl-tRNA hydrolase 27.0 97 0.0033 26.2 5.5 44 22-67 48-91 (121)
47 1rlk_A Hypothetical protein TA 22.8 1E+02 0.0034 25.9 4.7 44 22-67 44-87 (117)
48 3fwt_A Macrophage migration in 22.3 1.9E+02 0.0065 24.5 6.6 79 361-450 20-104 (133)
49 2dcv_A Tachystatin-B1; antimic 20.6 52 0.0018 22.4 1.9 23 514-538 3-26 (42)
50 2zv3_A PTH, peptidyl-tRNA hydr 20.6 96 0.0033 25.9 4.2 43 22-66 42-84 (115)
No 1
>3js8_A Cholesterol oxidase; cholsterol, organic solvent stability, oxygen channel, FAD, flavoprotein, oxidoreductase; HET: FAD SUC; 1.54A {Chromobacterium SP}
Probab=100.00 E-value=3.1e-66 Score=561.90 Aligned_cols=449 Identities=18% Similarity=0.210 Sum_probs=342.6
Q ss_pred eeeecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCC---CCceEEEEcC-CCCC
Q 008595 16 ILKNAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQ---SQSTLLISTA-KLDS 91 (560)
Q Consensus 16 ~~~~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~---~g~~vvI~l~-~ln~ 91 (560)
.....|+||++++.+.|..+++|+|++||+++|+.|++++.+|+++ |+|||+++++++++. +| ++|||+ +||+
T Consensus 14 ~y~~~~~nWs~~~~~~P~~vv~P~s~eEV~~~Vk~A~~~~~pv~v~-GgGhs~~~l~~~gG~~~~~G--VvIdls~~Ln~ 90 (540)
T 3js8_A 14 LYKQSFKNWAGDIKVDDVWTCAPRSADEVVKVANWAKDNGYKVRAR-GMMHNWSPLTLAAGVSCPAV--VLLDTTRYLTA 90 (540)
T ss_dssp CEEEEEECTTSCCEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CSCCCSSCSSCCTTCSSCSE--EEEETTTTCCC
T ss_pred hhcceeeccccccCCCccEEEEcCCHHHHHHHHHHHHHcCCeEEEE-eCCCCcccccccCCCCCCCe--EEEECcCcCCC
Confidence 4556789999999999999999999999999999999999999999 999999877776532 45 999995 7999
Q ss_pred CeeeeCC--CcEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCCCC---------CCCCcccccee
Q 008595 92 NIDIDVA--NLTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSSWW---------GKGGAVHDHVI 160 (560)
Q Consensus 92 i~~id~~--~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~---------~~~G~~~d~V~ 160 (560)
| ++|++ .++|+||||+++.+|.++|.++|++++++++++.+||||+|+||+||++.. .++|.++|+|+
T Consensus 91 I-~vD~~~~~~tVtV~AGv~l~~L~~~L~~~GL~l~~~~gi~~~TVGGaia~gagG~~~~~~G~~~~~g~~~G~~~D~V~ 169 (540)
T 3js8_A 91 M-SIDASGPVAKVTAQAGITMEALLTGLEKAGLGVTAAPAPGDLTLGGVLAINGHGTAIPAKGERRLAGASYGSISNLVL 169 (540)
T ss_dssp E-EEECSSSSEEEEEETTSBHHHHHHHHHHTTEECSCCCSCSCSBHHHHHHTTCCCCBCCCTTCCCCTTCCSSCGGGGEE
T ss_pred E-EECCCCCccEEEEccCCCHHHHHHHHHHcCCEEEecCCCCCeEEcccccCCCCcccccccccccccccccccHHHhEE
Confidence 8 99985 689999999999999999999999999999988799999999999998631 36899999999
Q ss_pred EEEEEecCCcccccceEEEcCCChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEEEE-ecChhHHHH-------HHHHH
Q 008595 161 GLSLVVPAKESEGYAKIIRIEANDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSITFN-FTDDAHIED-------IFMDH 232 (560)
Q Consensus 161 ~~~vV~~~G~~~g~~~v~~~~~~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~~~-~~~~~~~~~-------~~~~~ 232 (560)
++++|+++|++..+. ++++++++++|+++++|+|. ||||++||+++|.++...+.. ..+++++.+ .+.++
T Consensus 170 ~levV~adG~~~~~~-i~~~s~~~~DL~a~r~G~G~-gIVTevtlrl~P~~~l~~~~~~~~~~~e~l~~~~~~~~~~~~~ 247 (540)
T 3js8_A 170 SLTAVVYDKASGAYA-LRKFARNDPQIAPLLAHVGR-SLIVEATLQAAPNQRLRCQSWFNIPYGEMFAAAGSGGRTFASY 247 (540)
T ss_dssp EEEEEEEETTTTEEE-EEEEETTSGGGHHHHTCTTS-SCEEEEEEEEEECCEEEEEEECCSCHHHHTCCSSCCSSCHHHH
T ss_pred EEEEEcCCCCCceee-EEEeCCCChhHHHHHhcCCC-eEEEEEEEEEEECCceEEEEEecCCHHHHHhhcccccccHHHH
Confidence 999999999632221 56666666777788888898 599999999999999876654 478888886 79999
Q ss_pred HhhcCeeeEEEecCCCcEEEEecCCcccCCCCCCC-Cccc-ccccchhhhhhhhHHHHHHHHHhcccccchhhhhhhhhh
Q 008595 233 AKKHEFGDITWYPSRRTAVYRYDDRVTLNTRGDGV-NDFI-GFQDTSILISKSTRAAEKALETAKNANGKCTLAATVLGF 310 (560)
Q Consensus 233 ~~~~e~~~~~w~P~~~~~~~r~~dr~p~~~p~~~~-~~~~-~~~~~~~~~~~~~r~~~~~~~~~~~~~~~c~~~~~~~~~ 310 (560)
+++++|++++|||++++++++.+++.|...++... .+.. .|... . ....+.+.+..... .+.....+.
T Consensus 248 ~~~~~~~e~~WfP~t~~~~~k~~~~~~~~p~~~~~~~~p~~~~~~d-~----l~~~~~~~~~~~~~-~~~p~~~p~---- 317 (540)
T 3js8_A 248 LDSAGRVEAIWFPFTSNPWLKVWTVTPNKPLFSRQTDKPFNYPFSD-N----LPDEVTDLANKILS-LGDGKLTPA---- 317 (540)
T ss_dssp HHHTSEEEEEECTTCSSCEEEEEEECSSCCTTCEECSSSCCCHHHH-S----CCHHHHHHHHHHHT-SCCGGGHHH----
T ss_pred HhccCeEEEEEECCCCceEEEEccCCCCCCCccccccCCccccccc-c----cchHHHHHHHHHhh-cCCcccchh----
Confidence 99999999999999999988887665544333211 1000 00000 0 01112222211110 000111111
Q ss_pred hhhhccccccCCeeec-cCcccccc--cceeeccccccccccCCccccCccccCcceEEEEEEE--ecccHHHHHHHHHH
Q 008595 311 KKLIANGFKNNALIFT-GYPIVGRQ--GKLQTSGACLYSRRVDTSCAWDPRINGLFFYETTAIF--PANKFKDFIRDVKK 385 (560)
Q Consensus 311 ~~~~~~g~~~~~~~~~-g~~vvg~~--~~~~~s~~c~~~~~~~~~~~w~~r~~~~~f~~~e~~i--P~~~~~~~i~~v~~ 385 (560)
+....++....+...+ ...++|++ +++|.+ .+..+|.++||+| |++++.++|+++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~d~~g~s~~~~~~~~------------------~~~~r~~~~eyav~~p~~~~~~~~~~~~~ 379 (540)
T 3js8_A 318 FGKAQFAAASAGLVATASWDLWGWSKNLLLYVK------------------PTTLRVTANGYAVLTRRENVQRVLNEFVT 379 (540)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEHHHHHCCCC------------------TTSCCCEEBCEEEEECGGGHHHHHHHHHH
T ss_pred HHhHHHHhhhccccccccccccccccceEEEec------------------CccceeEeeEEeecCcHHHHHHHHHHHHH
Confidence 1222222211111111 12456677 676642 3347789999999 99999999999999
Q ss_pred HHHcC---CCCcCCccccCceEEeeccCCCCC-----------CCC--CCC-------eEEEEEEEeccCCCCCCcccH-
Q 008595 386 LRDLK---PENFCGVDSYNGFLIRFIKASSAY-----------LGQ--SED-------SIVVDYNYYRADDASTPRLNQ- 441 (560)
Q Consensus 386 l~~~~---~~~~~~~~~~~~i~~Rfv~~s~a~-----------Ls~--~~d-------~~~i~i~~y~~~~~~~p~~~~- 441 (560)
+++.. .....++++++|||+|++++|+.| ||+ +|+ +++|+++.|++.+ ++
T Consensus 380 ~~~~~~~~~~~~~~~~v~~pvEvR~~~~D~~~~~~~~~~~~p~LS~~~~r~~~p~~d~~~~i~~~~~~~~p------~~~ 453 (540)
T 3js8_A 380 FYQARVQAYQQQGRYPMNGPVEIRVTGLDDPSEAALSGGVAPALSAIRPRPDHPEWNVAVWLDILTLPGTP------YAN 453 (540)
T ss_dssp HHHHHHHHHHHTTCCCCCSCEEEEEECCCCGGGSSSTTCCCCTTCTTCCCTTCTTCCEEEEEEEEECTTCT------THH
T ss_pred HHHhhhhhhhhccCcccccceEEEEecCCchhhccccccCCcccCccCCCCCCCCcceEEEEEeeecCCCc------cHH
Confidence 88720 001124678999999999999999 687 466 9999999999643 56
Q ss_pred HHHHHHHHHHHhhcCC-----cccccCC-------CccchhHHHHh----c-------cCHHHHHHHHHhcCCCCCCCCh
Q 008595 442 DVWEEVEQMAFFKYGA-----RPHWAKN-------RKLAFLNVQQK----Y-------ANFSRFLAAKNQMDPQNMFSSE 498 (560)
Q Consensus 442 ~~~~eie~~~~~k~gG-----rPHWgK~-------~~~~~~~~~~~----Y-------P~~~~F~~~r~~~DP~g~F~n~ 498 (560)
+||+++||++..+||| ||||||+ |+.+.+.+++. | |+|++|+++|+++||+|+|+|+
T Consensus 454 ~~~~~~E~~~~~~~~g~~~~~RPhW~K~~~~~~~~~~~~~~~l~~~~~~~y~~~~~~~~~~~~~~~~~~~~DP~~~F~n~ 533 (540)
T 3js8_A 454 QFYREIEQWIEANFNGSYAAVRPEWSKGWGYTDQAAWADSAMLQTTIPNAFRAGQPAAANWDAAKAALAAYDPYRLFSSP 533 (540)
T ss_dssp HHHHHHHHHHHHHSCTTTEEEEECTTSBCSCCSSCTTCCHHHHHTHHHHHTTTTCCGGGSHHHHHHHHHHHCTTCCSCCH
T ss_pred HHHHHHHHHHHHhcCCCccccCcccccccccccccccCCHHHHHhhchhhhccCCCCCCCHHHHHHHHHhcCCCcccCCH
Confidence 5999999995555999 9999999 55577888888 9 9999999999999999999999
Q ss_pred hhhhhc
Q 008595 499 WSDEIL 504 (560)
Q Consensus 499 ~~~~~l 504 (560)
|+|++|
T Consensus 534 ~l~~ll 539 (540)
T 3js8_A 534 LLDSLG 539 (540)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 999987
No 2
>2i0k_A Oxidoreductase; MIX alpha beta, covalent FAD, flavoenzyme; HET: FAD; 1.60A {Brevibacterium sterolicum} SCOP: d.58.32.3 d.145.1.1 PDB: 1i19_A*
Probab=100.00 E-value=2.7e-64 Score=557.02 Aligned_cols=452 Identities=17% Similarity=0.195 Sum_probs=341.0
Q ss_pred CceeeecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCC---CCCceEEEEc-CCC
Q 008595 14 GCILKNAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCS---QSQSTLLIST-AKL 89 (560)
Q Consensus 14 ~~~~~~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~---~~g~~vvI~l-~~l 89 (560)
+-.+.+.++||++++.+.|..+++|+|++||+++|+.|++++.+|+++ |+|||+.++++.++ .+| ++||| ++|
T Consensus 18 ~~~y~~~~~~w~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~v~~~-G~G~s~~~~~l~~~~~~~~g--vvIdl~~~l 94 (561)
T 2i0k_A 18 IALFQQAYQNWSKEIMLDATWVCSPKTPQDVVRLANWAHEHDYKIRPR-GAMAGWTPLTVEKGANVEKV--ILADTMTHL 94 (561)
T ss_dssp SCCEEEEEECTTSSSEEEEEEEECCSSHHHHHHHHHHHHHHTCEEEEE-CCCCCCCTTSSCTTCCCTTE--EEEECTTTS
T ss_pred CHhHHHHHhhhhhccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEE-CCCCCcccccccCCCcCCCe--EEEechhhC
Confidence 444667789999999999999999999999999999999999999999 89999987665442 235 99999 899
Q ss_pred CCCeeeeC--CCcEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCC----------CCCCCCcccc
Q 008595 90 DSNIDIDV--ANLTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSS----------WWGKGGAVHD 157 (560)
Q Consensus 90 n~i~~id~--~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~----------~~~~~G~~~d 157 (560)
|+| ++|+ +.++|+||||+++.+|.++|.++|+.+|+.++++.+||||++++|+||+. .. ++|.++|
T Consensus 95 ~~i-~vd~~~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~TvGG~i~~~~~G~~l~~gG~~~~s~~-~~G~~~d 172 (561)
T 2i0k_A 95 NGI-TVNTGGPVATVTAGAGASIEAIVTELQKHDLGWANLPAPGVLSIGGALAVNAHGAALPAVGQTTLPGH-TYGSLSN 172 (561)
T ss_dssp CCE-EEECCSSSCEEEEETTSBHHHHHHHHHHTTEECSSCCSCTTCBHHHHHHTTCCCSCCCCTTCCCCTTC-CSSCGGG
T ss_pred Cce-EecCcCCccEEEEcCCCCHHHHHHHHHHcCCcccccCCCCCcccCCCcccCCcccccccCCccccccc-ccccHhh
Confidence 997 9999 88999999999999999999999999999999988999999999999984 32 5899999
Q ss_pred ceeEEEEEecCCcccccceEEEcCCChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEEEEe-cChhHHHHH-------H
Q 008595 158 HVIGLSLVVPAKESEGYAKIIRIEANDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSITFNF-TDDAHIEDI-------F 229 (560)
Q Consensus 158 ~V~~~~vV~~~G~~~g~~~v~~~~~~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~~~~-~~~~~~~~~-------~ 229 (560)
+|+++++|+++|++- +++++++++++|+++..|+|. ||||++||++.|.++....... .+.+++.+. +
T Consensus 173 ~V~~~evV~~dG~~~---~~~~~~~~~~dl~~a~~g~G~-giIt~~tl~l~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 248 (561)
T 2i0k_A 173 LVTELTAVVWNGTTY---ALETYQRNDPRITPLLTNLGR-CFLTSVTMQAGPNFRQRCQSYTDIPWRELFAPKGADGRTF 248 (561)
T ss_dssp GEEEEEEEEECSSSE---EEEEEETTSGGGHHHHSCTTS-SCEEEEEEECEECCEEEEEEECCSCHHHHTCCTTCSSSCH
T ss_pred eEEEEEEEeCCCCEE---EeeeccCCCccHHHHHhcCCC-EEEEEEEEEEEECCceEEEEEEccCHHHHHHHHhcccccH
Confidence 999999999999721 255666666666656567787 8999999999999987655444 677777766 7
Q ss_pred HHHHhhcCeeeEEEecCCCcEEEEecCCcccCCCCCCCCcccccc--------c-----------chhhhhhhhHHHHHH
Q 008595 230 MDHAKKHEFGDITWYPSRRTAVYRYDDRVTLNTRGDGVNDFIGFQ--------D-----------TSILISKSTRAAEKA 290 (560)
Q Consensus 230 ~~~~~~~e~~~~~w~P~~~~~~~r~~dr~p~~~p~~~~~~~~~~~--------~-----------~~~~~~~~~r~~~~~ 290 (560)
.++.+.+++.+++|+|+.++++++...+.+...+ +.++...+. | .+.... ....+.+.
T Consensus 249 ~~~~~~~~~~e~~~~p~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~-~~~~~~~~ 325 (561)
T 2i0k_A 249 EKFVAESGGAEAIWYPFTEKPWMKVWTVSPTKPD--SSNEVGSLGSAGSLVGKPPQAREVSGPYNYIFSDN-LPEPITDM 325 (561)
T ss_dssp HHHHHHHSEEEEEECTTCSCCEEEEEEEC----------------------CCCTTSEECSSSCCCHHHHS-CCHHHHHH
T ss_pred HHHHhcCCceEEEEccCCCeEEEEEEeCCCCCcc--ccccccccccccccccCCcccccccccccchhhhh-hhHHHHHH
Confidence 7888889999999999999888766544332111 111100000 0 000000 00001011
Q ss_pred HHHhcccccchhhhhhhhhhhhhhccccccCC-eeeccCcccccccceeeccccccccccCCccccCccccCcceEEEEE
Q 008595 291 LETAKNANGKCTLAATVLGFKKLIANGFKNNA-LIFTGYPIVGRQGKLQTSGACLYSRRVDTSCAWDPRINGLFFYETTA 369 (560)
Q Consensus 291 ~~~~~~~~~~c~~~~~~~~~~~~~~~g~~~~~-~~~~g~~vvg~~~~~~~s~~c~~~~~~~~~~~w~~r~~~~~f~~~e~ 369 (560)
+... +...+.+...+....++..+++ ..+.+.++++++++++.. ++..+.+|+|+||
T Consensus 326 l~~~------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~----------------~~~~~~~f~~~e~ 383 (561)
T 2i0k_A 326 IGAI------NAGNPGIAPLFGPAMYEITKLGLAATNANDIWGWSKDVQFY----------------IKATTLRLTEGGG 383 (561)
T ss_dssp HHHH------HTTCGGGHHHHHHHHHHHHHHHHHHTTCSEEEEEHHHHHCC----------------CCTTSCCCEEEEE
T ss_pred HHHH------hccCcccchHHHHHHHHhhccccccccCcceEeechHhhee----------------ecCCCceEEEEEE
Confidence 1000 0001111112222223222111 123345678899988531 1123466899999
Q ss_pred EE--ecccHHHHHHHHHHHHHcCCC---CcCCccccCceEEeeccCCCCCC-----------C---C--CC---C-eEEE
Q 008595 370 IF--PANKFKDFIRDVKKLRDLKPE---NFCGVDSYNGFLIRFIKASSAYL-----------G---Q--SE---D-SIVV 424 (560)
Q Consensus 370 ~i--P~~~~~~~i~~v~~l~~~~~~---~~~~~~~~~~i~~Rfv~~s~a~L-----------s---~--~~---d-~~~i 424 (560)
+| |++++.++|++++++++.+++ ..|++++++||++||+++|++|| | | ++ | +++|
T Consensus 384 av~~P~~~~~~~l~~l~~~i~~~~~~~~~~~~~~~~~pve~R~~~~d~~~L~~~~~~~~~~lS~~~p~~g~~~~~~t~~i 463 (561)
T 2i0k_A 384 AVVTSRANIATVINDFTEWFHERIEFYRAKGEFPLNGPVEIRCCGLDQAADVKVPSVGPPTISATRPRPDHPDWDVAIWL 463 (561)
T ss_dssp EEEECGGGHHHHHHHHHHHHHHHHHHHHHTTCCCCCSCEEEEEEECCCGGGCCSCCSCSCSSCTTCCCTTCTTCCEEEEE
T ss_pred EEcCcHHHHHHHHHHHHHHHHhchhhhhhcCCceeeccEEEEEecCchhhhccccccCCcccccccCCCCCCCCCeEEEE
Confidence 99 999999999999999976532 34677889999999999999999 4 2 13 6 9999
Q ss_pred EEEEeccCCCCCCcccH-HHHHHHHHHHHhhcCC-----cccccCCCccchh------HHH----Hhc-------cCHHH
Q 008595 425 DYNYYRADDASTPRLNQ-DVWEEVEQMAFFKYGA-----RPHWAKNRKLAFL------NVQ----QKY-------ANFSR 481 (560)
Q Consensus 425 ~i~~y~~~~~~~p~~~~-~~~~eie~~~~~k~gG-----rPHWgK~~~~~~~------~~~----~~Y-------P~~~~ 481 (560)
||++|++.+ +. +|++++|+|+..|||| ||||||++.++++ .++ ++| |+|++
T Consensus 464 d~~~y~~~~------~~~~~~~~~e~i~~~~~gG~~~~~RphWaK~~~~~~~~~~~~~~~~~~y~~~Yg~~~~~~p~~~~ 537 (561)
T 2i0k_A 464 NVLGVPGTP------GMFEFYREMEQWMRSHYNNDDATFRPEWSKGWAFGPDPYTDNDIVTNKMRATYIEGVPTTENWDT 537 (561)
T ss_dssp EEEECTTCT------THHHHHHHHHHHHHHHSBSSSEEEECCTTSCCSCSSSTTCCHHHHHTHHHHHTTTTSCTTSSHHH
T ss_pred EEEecCCCC------cHHHHHHHHHHHHHHhcCCCcCCCCCcccccCCccccccccHHHHHHHHHhhhccccCCCCCHHH
Confidence 999998764 56 8999999995555999 9999999999988 888 778 99999
Q ss_pred HHHHHHhcCCCCCCCChhhhhhcC
Q 008595 482 FLAAKNQMDPQNMFSSEWSDEILF 505 (560)
Q Consensus 482 F~~~r~~~DP~g~F~n~~~~~~lg 505 (560)
|+++|+++||+|+|+|+|++++||
T Consensus 538 f~~~r~~~DP~g~F~n~~~~rll~ 561 (561)
T 2i0k_A 538 ARARYNQIDPHRVFTNGFMDKLLP 561 (561)
T ss_dssp HHHHHHHHCTTCCSCCHHHHHHCC
T ss_pred HHHHHHhcCCCCccCCHHHHHhcC
Confidence 999999999999999999999996
No 3
>4feh_A Oxidoreductase DPRE1; alpha+beta, decaprenylphosphoryl-beta-D-RIBO; HET: FAD; 2.04A {Mycobacterium tuberculosis} PDB: 4fdo_A* 4fdn_A* 4fdp_A* 4ff6_A* 4aut_A* 4f4q_A* 4g3t_A 4g3u_A
Probab=100.00 E-value=1.3e-63 Score=540.89 Aligned_cols=436 Identities=18% Similarity=0.202 Sum_probs=322.5
Q ss_pred eeeecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhC--CCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCe
Q 008595 16 ILKNAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKN--KLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNI 93 (560)
Q Consensus 16 ~~~~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~--~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~ 93 (560)
+....++||. ++.+.|..+++|+|++||+++|+.|+++ +.++.++ |+|||+.+.+.+ .+| ++|||++||+|+
T Consensus 28 ~~~~~~~~W~-~~~~~p~~vv~P~s~eev~~~v~~a~~~~~~~~v~~~-G~G~s~~~~~~~--~~g--vvIdl~~l~~i~ 101 (481)
T 4feh_A 28 TTATRLTGWG-RTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIAR-GLGRSYGDNAQN--GGG--LVIDMTPLNTIH 101 (481)
T ss_dssp EEEEEECCTT-CCSCEEEEEEECSCHHHHHHHHHHHHTTTCTTCEEEE-CSSCSSSSTTCC--TTS--EEEECTTCCCEE
T ss_pred Cccceeeccc-CCCCCCCEEEeCCCHHHHHHHHHHHHHcCCCceEEEE-eCCcCCCCCCCC--cCe--EEEECccCCCce
Confidence 3446689996 5699999999999999999999999999 7999999 899998776543 247 999999999999
Q ss_pred eeeCCCcEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccc
Q 008595 94 DIDVANLTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEG 173 (560)
Q Consensus 94 ~id~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g 173 (560)
++|++.++|+||||+++.+|.++|.++|+++++.+++.++||||+|++|+||+++. ++|.++|+|+++++|+++|+
T Consensus 102 ~~d~~~~~v~v~aGv~l~~L~~~l~~~Gl~l~~~~g~~~~tvGGaia~~a~G~~~~-~~G~~~d~V~~~evV~~dG~--- 177 (481)
T 4feh_A 102 SIDADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHH-SAGSFGNHVRSMDLLTADGE--- 177 (481)
T ss_dssp EEETTTTEEEEETTCBHHHHHHHHGGGTEECSCCCSCSCCBHHHHHHTTCCCTTHH-HHCCGGGGEEEEEEECTTSC---
T ss_pred EEcCCCCEEEEcCCccHHHHHHHHHHcCCEEEEeCCcCccccCCccccccCCCCcc-cCCCccceEeEEEEEeCCCC---
Confidence 99999999999999999999999999999999999999899999999999999864 68999999999999999999
Q ss_pred cceEEEcCCC---hhhHHHHHhCCCCeEEEEEEEEEeeeCCceeE---EEEecChhHHHHHHHHHHhhcCeeeEEEe---
Q 008595 174 YAKIIRIEAN---DPLLDAAKVSLGLLGVISEVKLSLEPGFKRSI---TFNFTDDAHIEDIFMDHAKKHEFGDITWY--- 244 (560)
Q Consensus 174 ~~~v~~~~~~---~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~e~~~~~w~--- 244 (560)
+++++++ .++|+++++|+|.+||||++||++.|.++... .+...+.+++.+.+.+...++++.+++||
T Consensus 178 ---v~~~s~~~~~~dLf~a~rgs~G~~GIIt~~tl~l~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~w~d~~ 254 (481)
T 4feh_A 178 ---IRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEARYTYSSAWFDAI 254 (481)
T ss_dssp ---EEEECSSSTTHHHHHHHTTCTTTTCEEEEEEEECEECSCSEEEEEEEECSSHHHHHHHHSSSGGGGCSEEEEEECCS
T ss_pred ---EEEeCCCCCChHHHHHhhccCCCceEEEEEEEEEEeCCccEEEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEEecc
Confidence 8888864 35699999999999999999999999876443 33445556666666655677788999999
Q ss_pred ---cCCCcEEEEecCCcccCCCC-CCCCcccccccchhhhhhhhHHHHHHHHHhcccccchhhhhhhhhhhhhhcccccc
Q 008595 245 ---PSRRTAVYRYDDRVTLNTRG-DGVNDFIGFQDTSILISKSTRAAEKALETAKNANGKCTLAATVLGFKKLIANGFKN 320 (560)
Q Consensus 245 ---P~~~~~~~r~~dr~p~~~p~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~g~~~ 320 (560)
|+.+++++...++.+..... ....+.+.+.+.. .........+.+.+ +.....+....|....
T Consensus 255 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~vp~~~p~~~l~-----------~~~~~~~~~~~~~~~~ 321 (481)
T 4feh_A 255 SAPPKLGRAAVSRGRLATVEQLPAKLRSEPLKFDAPQ--LLTLPDVFPNGLAN-----------KYTFGPIGELWYRKSG 321 (481)
T ss_dssp SCTTSTTCEEEEEEEECCGGGSCGGGGGSTTCCC------------------------------------------CCSC
T ss_pred CCCCCCCeEEEEeCCcCcccccccccccCcccccccc--ccCCCccCcHHHHh-----------HHHHHHHHHHHHhhCc
Confidence 67788887665554322110 0001111111100 00001111110000 0011111111111100
Q ss_pred CCeeeccCcccccccceeeccccccccccCCccccCccccCcceEEEEEEEecccHHHHHHHHHHHHHcCCCCcCCcccc
Q 008595 321 NALIFTGYPIVGRQGKLQTSGACLYSRRVDTSCAWDPRINGLFFYETTAIFPANKFKDFIRDVKKLRDLKPENFCGVDSY 400 (560)
Q Consensus 321 ~~~~~~g~~vvg~~~~~~~s~~c~~~~~~~~~~~w~~r~~~~~f~~~e~~iP~~~~~~~i~~v~~l~~~~~~~~~~~~~~ 400 (560)
. ....++.. .-...+.+. ...|+.......|.|+||+||.+ +.++|++|+++++... ...+
T Consensus 322 ~-----------~~~~~~~~-~~~~~p~d~-v~~~nr~yg~~~f~q~e~~vP~~-~~~al~~l~~~i~~~~-----~~~~ 382 (481)
T 4feh_A 322 T-----------YRGKVQNL-TQFYHPLDM-FGEWNRAYGPAGFLQYQFVIPTE-AVDEFKKIIGVIQASG-----HYSF 382 (481)
T ss_dssp C-----------EEEEEEEH-HHHHC--------CHHHHTTTSEEEEEEEEETT-CHHHHHHHHHHHHHTT-----CCCS
T ss_pred c-----------cccccccc-eeeechhhh-ccccccccCCCCcEEEEEEeccc-HHHHHHHHHHHHHhcC-----CCce
Confidence 0 00001000 000112221 24555433334599999999999 9999999999888543 2467
Q ss_pred CceEEeeccCCCCCCCCCCCeEEEEEEEeccCCCCCCcccHHHHHHHHHHHHhhcCCcccccCCCccchhHHHHhccCHH
Q 008595 401 NGFLIRFIKASSAYLGQSEDSIVVDYNYYRADDASTPRLNQDVWEEVEQMAFFKYGARPHWAKNRKLAFLNVQQKYANFS 480 (560)
Q Consensus 401 ~~i~~Rfv~~s~a~Ls~~~d~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~YP~~~ 480 (560)
+||++||+++|++|||++.+..+|.+++|... .++++++++|++ +.+|||||||||++.++.+++++.||+|+
T Consensus 383 ~~v~~R~~~~d~~~LS~~~~~~tlal~~~~~~------~~~~~~~~le~i-~~~~gGRphw~K~~~~~~~~~~~~YP~~~ 455 (481)
T 4feh_A 383 LNVFKLFGPRNQAPLSFPIPGWNICVDFPIKD------GLGKFVSELDRR-VLEFGGRLYTAKDSRTTAETFHAMYPRVD 455 (481)
T ss_dssp CCEEEEECCCCSCTTCCCCSEEEEEEEEECCT------THHHHHHHHHHH-HHHTTCEECGGGCSSCCHHHHHHHCTTHH
T ss_pred EEEEEEEeCCCCccCCCCCCceEEEEEccCCc------cHHHHHHHHHHH-HHHcCCEecchhccCCCHHHHHHhCcCHH
Confidence 99999999999999999988777777776432 389999999999 79999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCChhhhhh
Q 008595 481 RFLAAKNQMDPQNMFSSEWSDEI 503 (560)
Q Consensus 481 ~F~~~r~~~DP~g~F~n~~~~~~ 503 (560)
+|+++|+++||+|+|+|+|++++
T Consensus 456 ~F~~lr~~~DP~g~F~n~~~rr~ 478 (481)
T 4feh_A 456 EWISVRRKVDPLRVFASDMARRL 478 (481)
T ss_dssp HHHHHHHHHCTTCCBCCHHHHHT
T ss_pred HHHHHHHhhCCccccCCHHHHhh
Confidence 99999999999999999999987
No 4
>2vfr_A Xylitol oxidase, alditol oxidase; FAD, sugar, polyol, flavin, flavoprotein, oxidoreductase; HET: FAD; 1.1A {Streptomyces coelicolor} PDB: 2vfs_A* 2vft_A* 2vfu_A* 2vfv_A*
Probab=100.00 E-value=1.1e-59 Score=504.72 Aligned_cols=408 Identities=21% Similarity=0.294 Sum_probs=324.3
Q ss_pred cCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCC
Q 008595 20 AYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVAN 99 (560)
Q Consensus 20 ~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~ 99 (560)
.|+||++++.+.|..+++|+|++||+++|+.| .+++++ |+|||+++++++ +.+| ++|||++||+|+++|+++
T Consensus 9 ~~~~w~~~~~~~p~~v~~P~s~~ev~~~v~~a----~~v~~~-G~G~s~~~~~~~-~~~g--~vi~l~~l~~i~~~d~~~ 80 (422)
T 2vfr_A 9 TVTNWAGNITYTAKELLRPHSLDALRALVADS----ARVRVL-GSGHSFNEIAEP-GDGG--VLLSLAGLPSVVDVDTAA 80 (422)
T ss_dssp CCBCSSSSCBCSCSSCBCCSSHHHHHHHHHHC----SSEEEC-SSCCCCSSTTCC-CTTC--EEECSTTSCCCEEEETTT
T ss_pred eeecCCCCccCCCCEEEeCCCHHHHHHHHHhC----CCEEEE-ECCCCCCCCccC-CCCc--EEEEhhhCCCcEEEcCCC
Confidence 37899999999999999999999999999998 689998 999999988873 3457 999999999999999999
Q ss_pred cEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEE
Q 008595 100 LTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIR 179 (560)
Q Consensus 100 ~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~ 179 (560)
++|+||||+++.+|.++|.++|+.+|..++++++||||++++|+||++. ++|.++|+|+++++|+++|+ +++
T Consensus 81 ~~v~v~aG~~l~~l~~~l~~~Gl~l~~~~~~~~~tvGG~i~~~~~G~~~--~~G~~~d~v~~~~vv~~~G~------~~~ 152 (422)
T 2vfr_A 81 RTVRVGGGVRYAELARVVHARGLALPNMASLPHISVAGSVATGTHGSGV--GNGSLASVVREVELVTADGS------TVV 152 (422)
T ss_dssp TEEEEETTCBHHHHHHHHHHTTEECSCCCSSSCSBHHHHHHHTCCCCCT--TCCCGGGGEEEEEEECTTSC------EEE
T ss_pred CEEEEcCCCCHHHHHHHHHHcCCcccCCCCCCCeeHHHHHhcCCCCCCc--ccCcHHHheEEEEEEeCCCC------EEE
Confidence 9999999999999999999999999988899889999999999999884 68999999999999999999 888
Q ss_pred cCCChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEEEE-ecChhHHH-HHHHHHHhhcCeeeEEEecCCCc--EEEEec
Q 008595 180 IEANDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSITFN-FTDDAHIE-DIFMDHAKKHEFGDITWYPSRRT--AVYRYD 255 (560)
Q Consensus 180 ~~~~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~e~~~~~w~P~~~~--~~~r~~ 255 (560)
+++++..|++++||+|+|||||++||++.|.++...... ..+.+++. +.+.++...+.+++++| |..++ ++.+..
T Consensus 153 ~~~~~~~f~~~~g~~G~lGvit~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~~~~~ 231 (422)
T 2vfr_A 153 IARGDERFGGAVTSLGALGVVTSLTLDLEPAYEMEQHVFTELPLAGLDPATFETVMAAAYSVSLFT-DWRAPGFRQVWLK 231 (422)
T ss_dssp EETTSTTGGGTSSCTTTTCEEEEEEEECEECCEEEEEEEEEECSTTCCHHHHHHHHTSSSEEEEEE-CSSSSSEEEEEEE
T ss_pred eCCCCCCcceEEecCCCCEEEEEEEEEEEecCceEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEe-cCCCceeEEEEec
Confidence 876433399999999999999999999999998664443 66777888 88888888889999999 99987 555544
Q ss_pred CCcccCCCCCCCCcccccccchhhhhhhhHHHHHHHHHhcccccchhhhhhhhhhhhhhccccccCCeeeccCccccccc
Q 008595 256 DRVTLNTRGDGVNDFIGFQDTSILISKSTRAAEKALETAKNANGKCTLAATVLGFKKLIANGFKNNALIFTGYPIVGRQG 335 (560)
Q Consensus 256 dr~p~~~p~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~g~~~~~~~~~g~~vvg~~~ 335 (560)
++++...+...+.. ..|......+... .+.+.. ....++..+
T Consensus 232 ~~~~~~~~~~~~~~-----------------------------~~~~~~~~~p~~~---~~~~~~------~~~~~~~~~ 273 (422)
T 2vfr_A 232 RRTDRPLDGFPYAA-----------------------------PAAEKMHPVPGMP---AVNCTE------QFGVPGPWH 273 (422)
T ss_dssp EETTSCCCCCTTSE-----------------------------ECSSCCCSSTTSC---GGGBCC------CTTCCEEGG
T ss_pred CcCCCCCCCchHHH-----------------------------HHHhhcccCcccC---hhhhcc------cCCccccHH
Confidence 44332211101100 0000000000000 000110 111234455
Q ss_pred ceeeccccccccccCCccccCccccCcceEEEEEEEecccHHHHHHHHHHHHHcCCCCcCCccccCceEEeeccCCCCCC
Q 008595 336 KLQTSGACLYSRRVDTSCAWDPRINGLFFYETTAIFPANKFKDFIRDVKKLRDLKPENFCGVDSYNGFLIRFIKASSAYL 415 (560)
Q Consensus 336 ~~~~s~~c~~~~~~~~~~~w~~r~~~~~f~~~e~~iP~~~~~~~i~~v~~l~~~~~~~~~~~~~~~~i~~Rfv~~s~a~L 415 (560)
+++.. . ...|+++ +..|.++|++||++++.++|++++++++. +.+.++|+++||+++++.||
T Consensus 274 ~~~~~-~---------~~~~~p~--~~~~~~~e~avP~e~~~~~l~~l~~~~~~------~~~~~~~v~~r~~~~~~~~L 335 (422)
T 2vfr_A 274 ERLPH-F---------RAEFTPS--SGAELQSEYLMPREHALAALHAMDAIRET------LAPVLQTCEIRTVAADAQWL 335 (422)
T ss_dssp GTSSS-B---------CTTCCCS--CCSCEEEEEEEEGGGHHHHHHHHHHTHHH------HGGGEEEEEEEEECCBCSTT
T ss_pred Hhccc-c---------cccccCC--cccEEEEEEEEEHHHHHHHHHHHHHHHHh------CCCceeeEEEEeecCCcccc
Confidence 55421 0 1135432 35688999999999999999999999986 24567999999999999999
Q ss_pred CCC--CCeEEEEEEEeccCCCCCCcccHHHHHHHHHHHHhhcCCcccccCCCccchhHHHHhccCHHHHHHHHHhcCCCC
Q 008595 416 GQS--EDSIVVDYNYYRADDASTPRLNQDVWEEVEQMAFFKYGARPHWAKNRKLAFLNVQQKYANFSRFLAAKNQMDPQN 493 (560)
Q Consensus 416 s~~--~d~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gGrPHWgK~~~~~~~~~~~~YP~~~~F~~~r~~~DP~g 493 (560)
|++ ++++.| +.|.+.+ .+.+.++++++|++ +.+|||||||||++.+.++.++++||++++|+++|++|||+|
T Consensus 336 s~~~~r~~~~l--~~~~~~~---~~~~~~~~~~~~~l-v~~~gG~~~wgk~~~~~~~~~~~~Yp~~~~f~~vk~~~DP~g 409 (422)
T 2vfr_A 336 SPAYGRDTVAA--HFTWVED---TAAVLPVVRRLEEA-LVPFAARPHWGKVFTVPAGELRALYPRLADFGALAGALDPAG 409 (422)
T ss_dssp CTTBTSCEEEE--EEEECSC---HHHHHHHHHHHHHH-HGGGTCEECTTSCCCCCHHHHHTTCTTHHHHHHHHHHHCTTC
T ss_pred CCCCCCCeEEE--EEecCCC---chhHHHHHHHHHHH-HHHcCCcccccccCCCCHHHHHHHCcCHHHHHHHHHHhCCCC
Confidence 985 888844 4455433 12345899999999 799999999999999999999999999999999999999999
Q ss_pred CCCChhhhhhcCC
Q 008595 494 MFSSEWSDEILFG 506 (560)
Q Consensus 494 ~F~n~~~~~~lg~ 506 (560)
+|.|+|++++||+
T Consensus 410 ~f~n~~~~r~~~~ 422 (422)
T 2vfr_A 410 KFTNAFVRGVLAG 422 (422)
T ss_dssp TTCCHHHHHHHC-
T ss_pred ccCCHHHHHhhCC
Confidence 9999999999985
No 5
>2bvf_A 6-hydroxy-D-nicotine oxidase; autoflavinylation, enantiomeric substrates, flavoenzymes, NI degradation; HET: FAD; 1.92A {Arthrobacter nicotinovorans} PDB: 2bvg_A* 2bvh_A*
Probab=100.00 E-value=7.3e-37 Score=330.92 Aligned_cols=403 Identities=16% Similarity=0.161 Sum_probs=261.9
Q ss_pred cCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCC
Q 008595 20 AYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVAN 99 (560)
Q Consensus 20 ~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~ 99 (560)
...+|+.++...|..+++|+|++||+++|+.|++++.++.++ |+||++.+.+. ..+| ++|||++||+| ++|++.
T Consensus 27 ~~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~~~~~--~~~g--vvi~l~~l~~i-~~d~~~ 100 (459)
T 2bvf_A 27 IANIWDGRHLQRPSLIARCLSAGDVAKSVRYACDNGLEISVR-SGGHNPNGYAT--NDGG--IVLDLRLMNSI-HIDTAG 100 (459)
T ss_dssp HHCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCTTC--CSSS--EEEECTTCCCE-EEETTT
T ss_pred HHHHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE-cCCcCCCCccc--cCCe--EEEECCCCCCE-EECCCC
Confidence 347899999999999999999999999999999999999999 89999876542 2346 99999999997 899999
Q ss_pred cEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEE
Q 008595 100 LTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIR 179 (560)
Q Consensus 100 ~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~ 179 (560)
.+|+|+||+++.+|.++|.++|+++|. +..+.++|||++.+|+||.... +||.++|+|+++++|+++|+ +++
T Consensus 101 ~~v~v~aG~~~~~l~~~l~~~Gl~~~~-g~~~~~gi~G~~~gGg~g~~~~-~~G~~~d~v~~~~vV~~~G~------i~~ 172 (459)
T 2bvf_A 101 SRARIGGGVISGDLVKEAAKFGLAAVT-GMHPKVGFCGLALNGGVGFLTP-KYGLASDNILGATLVTATGD------VIY 172 (459)
T ss_dssp TEEEEETTCBHHHHHHHHHTTTEEECC-CSCTTSBHHHHHTTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EEE
T ss_pred CEEEECCCCCHHHHHHHHHHcCCEecC-CCCCCcccceeecCCCCccccc-cccCHhHhEEEEEEEcCCCe------EEE
Confidence 999999999999999999999999987 4556689999999999998764 78999999999999999999 888
Q ss_pred cCCC--hhhHHHHHhCCCCeEEEEEEEEEeeeCC-ceeEEEEecCh---h--HHHHHHHHHHhh-cCee--eEEEecCC-
Q 008595 180 IEAN--DPLLDAAKVSLGLLGVISEVKLSLEPGF-KRSITFNFTDD---A--HIEDIFMDHAKK-HEFG--DITWYPSR- 247 (560)
Q Consensus 180 ~~~~--~~~f~a~~gs~G~lGVIt~vtl~l~p~~-~~~~~~~~~~~---~--~~~~~~~~~~~~-~e~~--~~~w~P~~- 247 (560)
+++. .++|++++||.|+|||||++|||++|.+ .........+. + ++.+.+.++... .+.. .+ .+|..
T Consensus 173 ~~~~~~~dLf~a~rg~~g~~GiVt~~~l~l~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 251 (459)
T 2bvf_A 173 CSDDERPELFWAVRGAGPNFGVVTEVEVQLYELPRKMLAGFITWAPSVSELAGLLTSLLDALNEMADHIYPSV-FVGVDE 251 (459)
T ss_dssp EESSSSHHHHHHHHHHGGGTCEEEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHTTTTCCCEE-EEEECT
T ss_pred eCCCCChhhHhHhhccCCccEEEEEEEEEEEECCCcEEEEEEEechHHhhHHHHHHHHHHHHHhCcHhhcccc-ccCccc
Confidence 7763 4679999999999999999999999994 43322222332 3 444555555543 2221 11 22210
Q ss_pred -CcEEEEecCCcccCCCCCCCCcccccccchhhhhhhhHHHHHHHHHhcccccchhhhhhhhhhhhhhccccccCCeeec
Q 008595 248 -RTAVYRYDDRVTLNTRGDGVNDFIGFQDTSILISKSTRAAEKALETAKNANGKCTLAATVLGFKKLIANGFKNNALIFT 326 (560)
Q Consensus 248 -~~~~~r~~dr~p~~~p~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~g~~~~~~~~~ 326 (560)
+...... .+.|.-.. ....+.++... ... ..+... ....
T Consensus 252 ~~~~~~~~---------------~~~~~g~~---~~~~~~~~~~~-~~~--------------------~~~~~~-~~~~ 291 (459)
T 2bvf_A 252 NRAPSVTV---------------CVGHLGGL---DIAERDIARLR-GLG--------------------RTVSDS-IAVR 291 (459)
T ss_dssp TCCEEEEE---------------EEECCSCH---HHHHHHHHHHH-TTS--------------------CCSEEC-CEEE
T ss_pred CCCceEEE---------------EEEEeCCH---HHHHHHHHHHH-HhC--------------------cchhcc-eeec
Confidence 1100000 00010000 00011111100 000 000000 0000
Q ss_pred cCcccccccceeeccccccccccCCccccCccccC-cceEE-EEEEEecccHHHHHHHHHHHHHcCCCCcCCccccCceE
Q 008595 327 GYPIVGRQGKLQTSGACLYSRRVDTSCAWDPRING-LFFYE-TTAIFPANKFKDFIRDVKKLRDLKPENFCGVDSYNGFL 404 (560)
Q Consensus 327 g~~vvg~~~~~~~s~~c~~~~~~~~~~~w~~r~~~-~~f~~-~e~~iP~~~~~~~i~~v~~l~~~~~~~~~~~~~~~~i~ 404 (560)
.|. ... .+ .... +.. ..+ ..+.. .++.+|.+...+.++++.+.+...+.. .....++
T Consensus 292 ~~~--~~~-~~-~~~~----------~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~ 350 (459)
T 2bvf_A 292 SYD--EVV-AL-NAEV----------GSF---EDGMSNLWIDREIAMPNARFAEAIAGNLDKFVSEPAS----GGSVKLE 350 (459)
T ss_dssp CHH--HHH-HH-HHHH----------SCC---CCSCEEEEEEEEECSCHHHHHHHHHTTGGGCEEETTT----TEEEEEE
T ss_pred CHH--HHH-hc-cccc----------ccC---CCCCcceEeccccccCCCCCHHHHHHHHHHHhhCCCC----CceeEEE
Confidence 000 000 00 0000 000 001 12333 577787665667776666655432200 1134667
Q ss_pred EeeccCCCCCCCC--CCCeEEEEEEEeccCCCCCCcccHHHHHHHHHHHHhhcCCcccccCCCccc----hhHHHHhc-c
Q 008595 405 IRFIKASSAYLGQ--SEDSIVVDYNYYRADDASTPRLNQDVWEEVEQMAFFKYGARPHWAKNRKLA----FLNVQQKY-A 477 (560)
Q Consensus 405 ~Rfv~~s~a~Ls~--~~d~~~i~i~~y~~~~~~~p~~~~~~~~eie~~~~~k~gGrPHWgK~~~~~----~~~~~~~Y-P 477 (560)
+|-.+.++...+. .|++.++.+..+...+......+.++++++++. +..+.+|||||++.|+. .+..++.| +
T Consensus 351 ~~gg~~~~~~~ta~~~R~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~-l~~~~~~p~~g~Y~N~~d~~~~~~~~~~yG~ 429 (459)
T 2bvf_A 351 IEGMPFGNPKRTPARHRDAMGVLALAEWSGAAPGSEKYPELARELDAA-LLRAGVTTSGFGLLNNNSEVTAEMVAEVYKP 429 (459)
T ss_dssp EECCCCCCTTCCSSCCCSSCEEEEEEEECTTSTTTTHHHHHHHHHHHH-HHHTTCEEEEECCGGGCSSCCHHHHHHHHCH
T ss_pred EeCCccCCCCCCCcccCCcceEEEEEEeCCCccchHHHHHHHHHHHHH-hcccccCCCCCeeeCCCCCcchHHHHHHhCc
Confidence 7722113233332 377654555554433221123467788888887 78999999999999983 45667788 7
Q ss_pred C-HHHHHHHHHhcCCCCCCCChh
Q 008595 478 N-FSRFLAAKNQMDPQNMFSSEW 499 (560)
Q Consensus 478 ~-~~~F~~~r~~~DP~g~F~n~~ 499 (560)
+ +++++++|++|||+|+|.+..
T Consensus 430 ~n~~rL~~iK~kyDP~~vF~~~~ 452 (459)
T 2bvf_A 430 EVYSRLAAVKREYDPENRFRHNY 452 (459)
T ss_dssp HHHHHHHHHHHHHCTTCCCCSSS
T ss_pred chHHHHHHHHHHhCcccccCCCC
Confidence 6 999999999999999999854
No 6
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=100.00 E-value=4.6e-36 Score=337.50 Aligned_cols=210 Identities=20% Similarity=0.179 Sum_probs=175.4
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccC---CCCCceEEEEcCCCCCCeeeeCC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPC---SQSQSTLLISTAKLDSNIDIDVA 98 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~---~~~g~~vvI~l~~ln~i~~id~~ 98 (560)
..|.+.+...|.+|++|+|++||+++|++|++++++|.++ |||||.++.+.+. ...+ |+|||++||+|++||++
T Consensus 196 ~~~~g~~~~~P~aVV~P~s~eeV~~iv~~A~~~~ipVvpr-GgGTsl~GG~~~~~~~~~gg--VvLDlsrMnrIleiD~~ 272 (658)
T 4bby_A 196 LLREGMFERIPDIVLWPTCHDDVVKIVNLACKYNLCIIPI-GGGTSVSYGLMCPADETRTI--ISLDTSQMNRILWVDEN 272 (658)
T ss_dssp HHHSSCCSCCCSEEEECCSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTCCCTTCCSCE--EEEECTTCCCEEEEETT
T ss_pred HHhCCcccCCcCEEEeeCCHHHHHHHHHHHHHCCCeEEEE-CCCcCCCCCCCCCCCCCCcE--EEEECccCCCcEEEcCC
Confidence 4578888999999999999999999999999999999998 8999876654332 1234 89999999999999999
Q ss_pred CcEEEEeCCCCHHHHHHHHHhcCCceeecCCCC-CccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceE
Q 008595 99 NLTVTADAGVPLRQLIDRVEEENLSIVAAPYWE-GVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKI 177 (560)
Q Consensus 99 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~-~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v 177 (560)
+++++||||+++.+|.++|+++|+.+|+.|+.. ..||||+|+||++|.... +||.+.|+|+++++|+++|++....++
T Consensus 273 ~~~atVeaGv~~~~L~~~L~~~Gl~lp~dP~S~~~aTIGG~iAtna~G~~s~-rYG~~~d~VlgleVVlpdG~i~~~~~~ 351 (658)
T 4bby_A 273 NLTAHVEAGITGQELERQLKESGYCTGHEPDSLEFSTVGGWISTRASGMKKN-IYGNIEDLVVHMKVVTPRGVIEKSCQG 351 (658)
T ss_dssp TTEEEEETTCBHHHHHHHHHHHTEECCCCCTTTTTCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEEETTEEEECSCCC
T ss_pred CCEEEEecCchHHHHHHHHHHcCCccCCCCCCccccEEeehhhcCCCCCCcc-CcCCHHHheeeEEEEeCCCcccccccc
Confidence 999999999999999999999999999988654 489999999999999886 799999999999999999983222222
Q ss_pred EEcCCChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEE--EEecChhHHHHHHHHHHhh
Q 008595 178 IRIEANDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSIT--FNFTDDAHIEDIFMDHAKK 235 (560)
Q Consensus 178 ~~~~~~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~--~~~~~~~~~~~~~~~~~~~ 235 (560)
.+.+.+.+++++++||+|+|||||++||||.|.++...+ +.+-+.++..+.+.++.+.
T Consensus 352 ~k~~aGyDL~~L~iGSEGTLGIITeatLrL~P~P~~~~~~~~~f~d~~~a~~av~~i~~~ 411 (658)
T 4bby_A 352 PRMSTGPDIHHFIMGSEGTLGVITEATIKIRPTPEYQKYGSVAFPNFEQGVACLREIAKQ 411 (658)
T ss_dssp SSCCSSSCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred cccCCCcCHHHHhccCCCcCcceeeeeeeeccCCccccccccccCCchhhhhhHHHHHHc
Confidence 223335578999999999999999999999999985533 3344566666666666654
No 7
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.1e-33 Score=299.98 Aligned_cols=202 Identities=19% Similarity=0.221 Sum_probs=173.9
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCcE
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANLT 101 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~~ 101 (560)
++|+.++...|.+|++|+|++||+++|+.|++++.++.++ |+||++.+.+.++ .+| ++|||++||+|+++|+++.+
T Consensus 42 ~d~~~~~~~~p~~vv~P~s~eeV~~~v~~a~~~~~pv~~~-GgGt~~~g~~~~~-~gg--vvIdl~~m~~i~~id~~~~~ 117 (476)
T 3pm9_A 42 TEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQ-GGNTGLVGGQTPH-NGE--VVISLKRMDKIREIDTSSNT 117 (476)
T ss_dssp BCTTCCCBCCCSCEECCCSHHHHHHHHHHHHHHTCCEEEE-SSSCCSSSTTCCC-SSC--EEEECTTCCCEEEEETTTTE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEE-eCCCCCCCCccCC-CCc--EEEEeeCCCceEEEcCCCCe
Confidence 5898888999999999999999999999999999999998 8999988777663 236 99999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHHhcCCceeecCCCC-CccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEEc
Q 008595 102 VTADAGVPLRQLIDRVEEENLSIVAAPYWE-GVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIRI 180 (560)
Q Consensus 102 vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~-~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~~ 180 (560)
++||||+++.+|.++|.++|+.+|..++.. .+||||+++||+||.+.. +||.+.|+|+++++|+++|+ ++++
T Consensus 118 v~V~aGv~~~~l~~~l~~~Gl~~~~~~~s~~~~tvGG~ia~nagG~~~~-~yG~~~d~V~~levV~~dG~------v~~~ 190 (476)
T 3pm9_A 118 ITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAAL-AYGLARDMALGVEVVLADGR------VMNL 190 (476)
T ss_dssp EEEETTCBHHHHHHHHHHTTEECCCCCTTTTTCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEECTTSC------EEEC
T ss_pred EEECCCcCHHHHHHHHHHhCCccCCCCCCCCcEEEccccCCCCCCCccc-ccCcHHHheeEEEEEccCCe------EEEc
Confidence 999999999999999999999988876554 489999999999999875 78999999999999999999 7664
Q ss_pred CC-------ChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEE--EEecChhHHHHHHHHHHh
Q 008595 181 EA-------NDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSIT--FNFTDDAHIEDIFMDHAK 234 (560)
Q Consensus 181 ~~-------~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (560)
+. +.+++++++||.|+|||||++|||+.|.++...+ ..+.+.++..+.+.++.+
T Consensus 191 ~~~~~k~~~g~dl~~l~~Gs~GtlGIIt~~tl~l~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 253 (476)
T 3pm9_A 191 LSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVGLQSPDDALKLLGIAQG 253 (476)
T ss_dssp CCCCSCCCSSCCCHHHHTTSTTSSCEEEEEEEECEECCSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred CCcccCCCCCcCHHHHhccCCCCcEEEEEEEEEEeecCceeEEEEEEcCCHHHHHHHHHHHHH
Confidence 32 2356899999999999999999999999875432 233455666666666554
No 8
>3tsh_A Pollen allergen PHL P 4; flavoprotein, BI-covalent flavinylation, oxidoreductase, Glu dehydrogenase, N-glycosylation, allergy, dehydrogenase; HET: FDA; 1.90A {Phleum pratense} PDB: 3tsj_A*
Probab=100.00 E-value=2e-31 Score=291.31 Aligned_cols=183 Identities=16% Similarity=0.222 Sum_probs=159.2
Q ss_pred CCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccC--CCCCceEEEEcCCCCCCeeeeCCCc
Q 008595 23 AWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPC--SQSQSTLLISTAKLDSNIDIDVANL 100 (560)
Q Consensus 23 ~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~--~~~g~~vvI~l~~ln~i~~id~~~~ 100 (560)
.|+.....+|.+|++|+|++||+++|++|++++++|.++ +||||+.+.+... ..+| ++|||++||+| ++|++.+
T Consensus 44 rw~~~~~~~P~~vv~p~~~~~v~~~v~~a~~~~~~~~~r-~gGh~~~g~s~~~~~~~~~--~~idl~~~~~v-~~d~~~~ 119 (500)
T 3tsh_A 44 RWSSPDNVKPLYIITPTQVSHIQSAVVCGRRHSVRIRVR-SGGHDYEGLSYRSLQPETF--AVVDLNKMRAV-WVDGKAR 119 (500)
T ss_dssp TTTSTTSCCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCTTCTTTCCSSSCCE--EEEECTTCCCE-EEETTTT
T ss_pred cccCCCCCCceEEEEcCCHHHHHHHHHHHHHCCCcEEEE-cCCcCCCCCcCCCCCcCCe--EEEECcCCCCE-EECCCCC
Confidence 398888999999999999999999999999999999998 9999988765321 2345 99999999996 9999999
Q ss_pred EEEEeCCCCHHHHHHHHHhcCCceeecC-CCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEE
Q 008595 101 TVTADAGVPLRQLIDRVEEENLSIVAAP-YWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIR 179 (560)
Q Consensus 101 ~vtv~aGv~l~~L~~~l~~~Gl~l~~~~-~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~ 179 (560)
+++||||+++.||.++|.++|+.+...+ ..+.++|||.+++|+||..+. +||...|+|++++||++||+ |+.
T Consensus 120 ~~~v~~G~~~~~~~~~l~~~g~~~~~~~g~~~~vgvgG~~~~gg~g~~~~-~~G~~~d~v~~~~vV~a~G~------i~~ 192 (500)
T 3tsh_A 120 TAWVDSGAQLGELYYAIYKASPTLAFPAGVCPTIGVGGNFAGGGFGMLLR-KYGIAAENVIDVKLVDANGK------LHD 192 (500)
T ss_dssp EEEEETTSBHHHHHHHHHHHCTTEECCCCSSTTSBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTSC------EEC
T ss_pred EEEEccCcCHHHHHHHHHHhCCCcccCCCCCCCceecCccccccCCcccc-ccCChhhheeeEEEECCCce------EEE
Confidence 9999999999999999999998776544 445589999999999998874 79999999999999999998 776
Q ss_pred cCC-ChhhHHHHHh-CCCCeEEEEEEEEEeeeCCceeEE
Q 008595 180 IEA-NDPLLDAAKV-SLGLLGVISEVKLSLEPGFKRSIT 216 (560)
Q Consensus 180 ~~~-~~~~f~a~~g-s~G~lGVIt~vtl~l~p~~~~~~~ 216 (560)
.+. ++++|||+++ |.|+|||||++|||++|.++....
T Consensus 193 ~~~~~~dl~~a~~gg~gg~fGvvt~~~~~~~p~p~~~~~ 231 (500)
T 3tsh_A 193 KKSMGDDHFWAVRGGGGESFGIVVAWQVKLLPVPPTVTI 231 (500)
T ss_dssp HHHHCHHHHHHHTTSCSSTTCEEEEEEEECEECCSCEEE
T ss_pred CCCCChHHHHHHHhhcccceEEEEEEEEEEEeCCCeEEE
Confidence 544 4578999995 567999999999999999875433
No 9
>3rja_A Carbohydrate oxidase; protein-substrate analogue complex, FAD binding domain, BERB berberine-like domain, glucooligosaccharide oxidase; HET: FAD NAG ABL TRS; 2.10A {Microdochium nivale} PDB: 3rj8_A*
Probab=100.00 E-value=1.9e-30 Score=281.06 Aligned_cols=190 Identities=19% Similarity=0.236 Sum_probs=166.1
Q ss_pred eeecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeee
Q 008595 17 LKNAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDID 96 (560)
Q Consensus 17 ~~~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id 96 (560)
+......|+.++.+.|..|++|+|++||+++|++|++++++|.++ ||||++.+.......++ ++|||++||+|.++|
T Consensus 22 y~~~~~~~n~~~~~~p~~vv~P~s~~dv~~~v~~a~~~~~~v~v~-ggGh~~~g~~~~~~~~~--vvIdl~~~~~i~~vd 98 (473)
T 3rja_A 22 YERDVEPFNIRLPYIPTAIAQTQTTAHIQSAVQCAKKLNLKVSAK-SGGHSYASFGFGGENGH--LMVQLDRMIDVISYN 98 (473)
T ss_dssp HHHHTCCSBTTSCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE-SSCCCTTCGGGTSSSSC--EEEECTTCCCEEEEE
T ss_pred hHHHHHHhhcccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-cCCCCCCCCcccCCCCe--EEEECCCCCceEEEc
Confidence 334447899999999999999999999999999999999999999 89999876543323346 999999999987799
Q ss_pred CCCcEEEEeCCCCHHHHHHHHHhcC-CceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccc
Q 008595 97 VANLTVTADAGVPLRQLIDRVEEEN-LSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYA 175 (560)
Q Consensus 97 ~~~~~vtv~aGv~l~~L~~~l~~~G-l~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~ 175 (560)
++..+|+||||+++.+|.++|.++| +.+|. +..+.++|||.+++|++|.... ++|.+.|+|+++++|+++|+
T Consensus 99 ~~~~~v~v~aG~~~~~l~~~l~~~G~~~~p~-G~~~~vgvgG~~~ggg~G~~~~-~~G~~~D~v~~~~vV~a~G~----- 171 (473)
T 3rja_A 99 DKTGIAHVEPGARLGHLATVLNDKYGRAISH-GTCPGVGISGHFAHGGFGFSSH-MHGLAVDSVVGVTVVLADGR----- 171 (473)
T ss_dssp TTTTEEEECTTCBHHHHHHHHHHHHSEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTSC-----
T ss_pred CCCCEEEECCCCCHHHHHHHHHHcCCEEecc-CCCCCcEeeeeccCCCCCcccc-cccchHhheeeEEEEecCCe-----
Confidence 9999999999999999999999999 77775 5566689999999999998774 78999999999999999999
Q ss_pred eEEEcCCC--hhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEEE
Q 008595 176 KIIRIEAN--DPLLDAAKVSLGLLGVISEVKLSLEPGFKRSITF 217 (560)
Q Consensus 176 ~v~~~~~~--~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~~ 217 (560)
+++++++ .++||+++||.|.|||||+++||+.|.+.....+
T Consensus 172 -v~~~~~~~~~dLf~a~rG~~g~~GIVt~~~l~l~p~p~~~~~~ 214 (473)
T 3rja_A 172 -IVEASATENADLFWGIKGAGSNFGIVAVWKLATFPAPKVLTRF 214 (473)
T ss_dssp -EEEEETTBSHHHHHHHHHHGGGTCEEEEEEEECEECCSCEEEE
T ss_pred -EEEeCCCCCcchhhcccCCCCceEEEEEEEEEEEeCCCceEEE
Confidence 8887653 4679999999999999999999999998744333
No 10
>3fw9_A Reticuline oxidase; BI-covalent flavinylation, N-glycosylation, alakloid biosynt oxidoreductase, alkaloid metabolism; HET: FAD SLX NAG MAN; 1.49A {Eschscholzia californica} PDB: 3d2h_A* 3d2d_A* 3d2j_A* 3gsy_A* 4ec3_A* 3fw8_A* 3fw7_A* 3fwa_A*
Probab=99.98 E-value=1.9e-30 Score=281.95 Aligned_cols=184 Identities=22% Similarity=0.283 Sum_probs=161.2
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCcE
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANLT 101 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~~ 101 (560)
..|+....+.|.+|++|+|++||+++|+.|++++++|.++ |+||++.+.+.....+| ++|||++||+| ++|++.++
T Consensus 36 ~r~~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-GgGh~~~g~~~~~~~gg--vvIdl~~m~~i-~vd~~~~~ 111 (495)
T 3fw9_A 36 PLFQNSLISKPSAIILPGSKEELSNTIRCIRKGSWTIRLR-SGGHSYEGLSYTSDTPF--ILIDLMNLNRV-SIDLESET 111 (495)
T ss_dssp GGGCSTTSCCCSEEECCCSHHHHHHHHHHHHTSSCEEEEE-SSCCCTTCTTSCCSSCE--EEEECTTCCCE-EEETTTTE
T ss_pred cccccccCCCCCEEEecCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCccccCCCCe--EEEECCCCCcE-EEeCCCCE
Confidence 4688888999999999999999999999999999999999 99999887765432345 99999999998 99999999
Q ss_pred EEEeCCCCHHHHHHHHHhc--CCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEE
Q 008595 102 VTADAGVPLRQLIDRVEEE--NLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIR 179 (560)
Q Consensus 102 vtv~aGv~l~~L~~~l~~~--Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~ 179 (560)
|+||||+++.+|.++|.++ |+.+|. +..+.++|||.+++|++|.... ++|...|+|+++++|+++|+ +++
T Consensus 112 v~V~aG~~l~~l~~~l~~~g~gl~~~~-G~~~~vgigG~~~gGg~G~~~~-~~G~~~D~v~~~~vV~adG~------i~~ 183 (495)
T 3fw9_A 112 AWVESGSTLGELYYAITESSSKLGFTA-GWCPTVGTGGHISGGGFGMMSR-KYGLAADNVVDAILIDANGA------ILD 183 (495)
T ss_dssp EEEETTCBHHHHHHHHHHHCSSEECCC-CSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTCC------EEC
T ss_pred EEEcCCCCHHHHHHHHHHhcCCceecc-CCCCCCeEeeeccCCCCccccc-CCCchhheEEEEEEEcCCCC------EEE
Confidence 9999999999999999999 777775 4455689999999999999874 78999999999999999999 775
Q ss_pred cC-CChhhHHHHHh-CCCCeEEEEEEEEEeeeCCceeEEE
Q 008595 180 IE-ANDPLLDAAKV-SLGLLGVISEVKLSLEPGFKRSITF 217 (560)
Q Consensus 180 ~~-~~~~~f~a~~g-s~G~lGVIt~vtl~l~p~~~~~~~~ 217 (560)
.. .+.++|++++| ++|.|||||++||||+|.++....+
T Consensus 184 ~~~~~~DLf~a~rGg~~g~~GIVt~~~l~l~p~p~~~~~~ 223 (495)
T 3fw9_A 184 RQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVF 223 (495)
T ss_dssp HHHHCHHHHHHHTTSCTTSSCEEEEEEEECEECCSSEEEE
T ss_pred cCCCChhhhhhhhcccCCCcEEEEEEEEEEEeCCCeEEEE
Confidence 22 24567999998 8899999999999999998754443
No 11
>1w1o_A Cytokinin dehydrogenase 1; flavin, oxidoreductase, flavoprotein, FAD; HET: NAG FAD; 1.7A {Zea mays} SCOP: d.58.32.4 d.145.1.1 PDB: 1w1q_A* 1w1r_A* 1w1s_A* 3dq0_A* 2qkn_A* 3c0p_A* 3bw7_A* 2qpm_A* 3kjm_A*
Probab=99.98 E-value=1.2e-29 Score=279.36 Aligned_cols=202 Identities=18% Similarity=0.247 Sum_probs=172.5
Q ss_pred CCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHh--C-CCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCC-----
Q 008595 21 YGAWGDRKDCHVSNVTYPTTEEELRLAVAHANK--N-KLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSN----- 92 (560)
Q Consensus 21 ~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~--~-~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i----- 92 (560)
..+|+......|.+|++|+|++||+++|+.|++ + +.+|.++ |+|||+.+.+.+. +| ++|||++||+|
T Consensus 58 ~~d~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~~~~~v~~~-G~G~~~~g~~~~~--~g--vvi~l~~m~~i~~~~~ 132 (534)
T 1w1o_A 58 STDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFR-GRGHSLMGQAFAP--GG--VVVNMASLGDAAAPPR 132 (534)
T ss_dssp SCCTTCSCCCCCSEEECCSSHHHHHHHHHHHHHCTTCCCCEEEE-SSCCCSSSTTCCT--TS--EEEEGGGGGCSSSSCS
T ss_pred hccccccccCCCCEEEecCCHHHHHHHHHHHHhcCCCCceEEEE-CCCCCCCCCcCCC--Ce--EEEECccccccccCcc
Confidence 478988888999999999999999999999998 6 8999998 9999987766542 46 99999999998
Q ss_pred eeeeCCCcEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCccc
Q 008595 93 IDIDVANLTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESE 172 (560)
Q Consensus 93 ~~id~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~ 172 (560)
+++|+++.+|+||||+++.+|.+++.++|+.++..++...+||||++++|++|.... +||.+.|+|+++++|+++|+
T Consensus 133 ~~~d~~~~~v~v~aGv~~~~l~~~~~~~Gl~~~~~~~~~~~tvGG~v~~~g~g~~~~-~yG~~~d~v~~~evV~~dG~-- 209 (534)
T 1w1o_A 133 INVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWTDYLYLTVGGTLSNAGISGQAF-RHGPQISNVLEMDVITGHGE-- 209 (534)
T ss_dssp EEECTTSSEEEEETTCBHHHHHHHHHTTTEEESCCCSSCCSBHHHHHTTCCCSTTHH-HHCCGGGSEEEEEEEETTSC--
T ss_pred EEEcCCCCEEEECCCcCHHHHHHHHHHCCCcccCCCCCCCEEeceeccCCCcccccc-ccccHhhhEEEEEEEeCCcc--
Confidence 899998999999999999999999999999877666666789999999999887764 78999999999999999999
Q ss_pred ccceEEEcCCC--hhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEE--EEecChhHHHHHHHHHHh
Q 008595 173 GYAKIIRIEAN--DPLLDAAKVSLGLLGVISEVKLSLEPGFKRSIT--FNFTDDAHIEDIFMDHAK 234 (560)
Q Consensus 173 g~~~v~~~~~~--~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (560)
++++++. .++|++++||.|+|||||++|||++|.++.... ..+.+.++..+.+..+.+
T Consensus 210 ----v~~~~~~~~~dL~~~~rGs~G~~GIVt~~~l~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (534)
T 1w1o_A 210 ----MVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTA 271 (534)
T ss_dssp ----EEEEESSSSHHHHHHHTTCTTCSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHC
T ss_pred ----EEEECCCCChhhHhhhcCCCCCcEEEEEEEEEEEECCcceEEEEEEeCCHHHHHHHHHHHHh
Confidence 8887753 567999999999999999999999999875432 334455555555544433
No 12
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=99.97 E-value=1.2e-29 Score=278.38 Aligned_cols=174 Identities=16% Similarity=0.159 Sum_probs=151.8
Q ss_pred CCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCc
Q 008595 21 YGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANL 100 (560)
Q Consensus 21 ~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~ 100 (560)
.++|+.++...|.+|++|+|++||+++|+.|+++++++.++ |+||++.+.+.. ..+| ++|||++||+| ++|++..
T Consensus 48 ~~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~v~v~-ggGh~~~g~~~~-~~~g--vvIdl~~l~~i-~~d~~~~ 122 (530)
T 2y3s_A 48 RRGENLRFVGDPEEIHLVGSAAEIEQVLSRAVRSGKRVAVR-SGGHCYEDFVAN-SDVR--VVMDMSRLSAV-GFDEERG 122 (530)
T ss_dssp TCCSCTTCCCCCSEEEECCSHHHHHHHHHHHHHTTCCEEEE-SSCCCSSSTTTC-TTCC--EEEECTTCCCE-EEETTTT
T ss_pred HhHhhhhccCCCCEEEecCCHHHHHHHHHHHHHcCCcEEEE-CCCCCCCCCccc-CCCe--EEEEcccCCCE-EEcCCCC
Confidence 46788888999999999999999999999999999999999 899998776543 2346 99999999998 9999999
Q ss_pred EEEEeCCCCHHHHHHHHHh-cCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEe--cCCcccccceE
Q 008595 101 TVTADAGVPLRQLIDRVEE-ENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVV--PAKESEGYAKI 177 (560)
Q Consensus 101 ~vtv~aGv~l~~L~~~l~~-~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~--~~G~~~g~~~v 177 (560)
+|+|+||+++.+|.++|.+ +|+.++. +..+.++|||.+++|++|.... ++|.++|+|++++||+ ++|+ +
T Consensus 123 ~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------i 194 (530)
T 2y3s_A 123 AFAVEAGATLGAVYKTLFRVWGVTLPG-GACPDVGAGGHILGGGYGPLSR-MHGSIVDYLHAVEVVVVDASGD------A 194 (530)
T ss_dssp EEEEETTCBHHHHHHHHHHHHSCCCCC-CSCTTCBHHHHHHTTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------E
T ss_pred EEEEeCCCCHHHHHHHHHhhcCeEEeC-CCCCCCCcCCCcCCCCCCcccc-cccchhhheeeEEEEEecCCCc------E
Confidence 9999999999999999985 8999886 5556689999999999998874 7899999999999999 4598 6
Q ss_pred EEc--CC---Ch--hhHHHHHhC-CCCeEEEEEEEEEe
Q 008595 178 IRI--EA---ND--PLLDAAKVS-LGLLGVISEVKLSL 207 (560)
Q Consensus 178 ~~~--~~---~~--~~f~a~~gs-~G~lGVIt~vtl~l 207 (560)
+.+ ++ +. ++|||++|+ +|+|||||++|||+
T Consensus 195 ~~v~~~~~~~~~d~DLf~a~rG~g~g~fGIVt~~~l~l 232 (530)
T 2y3s_A 195 RTVIATREPSDPNHDLWWAHTGGGGGNFGVVVRYWLRT 232 (530)
T ss_dssp EEEEEESCTTCTTHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred EEEeccccccCCChHHHHHHhcCCCCCcEEEEEEEEEe
Confidence 332 43 22 489999985 79999999999999
No 13
>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*
Probab=99.97 E-value=5.8e-30 Score=280.71 Aligned_cols=203 Identities=20% Similarity=0.251 Sum_probs=169.8
Q ss_pred CCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHh-CCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeC--
Q 008595 21 YGAWGDRKDCHVSNVTYPTTEEELRLAVAHANK-NKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDV-- 97 (560)
Q Consensus 21 ~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~-~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~-- 97 (560)
.++|++.....|.+|++|+|++||+++|+.|++ ++.+|.++ |+|||+.+.+.+. +| ++|||++||+| ++|+
T Consensus 51 ~~d~~~~~~~~P~~vv~P~s~eeV~~iv~~a~~~~~~~v~~~-GgGts~~g~~~~~--~g--vvidl~~m~~i-~i~~~~ 124 (524)
T 2exr_A 51 GRDFGGMNCVKPLAVVRPVGPEDIAGAVKAALRSDKLTVAAR-GNGHSINGQAMAE--GG--LVVDMSTTAEN-HFEVGY 124 (524)
T ss_dssp TCCTTCCCCCCCSEEEECSSHHHHHHHHHHHHHSSSCCEEEE-SSSCCSSSTTCCT--TS--EEEEGGGGTTS-CEEEEE
T ss_pred hccccccccCCCCEEEecCCHHHHHHHHHHHHhhcCceEEEE-CCCcCCCCcccCC--CE--EEEECcCCCCc-EEeecc
Confidence 367888788899999999999999999999996 89999998 9999988776542 46 99999999999 8887
Q ss_pred ---CC--cEEEEeCCCCHHHHHHH-HHhcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcc
Q 008595 98 ---AN--LTVTADAGVPLRQLIDR-VEEENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKES 171 (560)
Q Consensus 98 ---~~--~~vtv~aGv~l~~L~~~-l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~ 171 (560)
+. .+|+||||+++.++.+. |+++|+.++..+++..+||||++++|++|.... +||.+.|+|+++++|+++|+
T Consensus 125 ~~~~~~~~~v~v~aGv~~~~l~~~~l~~~Gl~~~~~~s~~~~tiGG~va~ng~G~~~~-~yG~~~d~V~~l~vV~~dG~- 202 (524)
T 2exr_A 125 LSGGDATAFVDVSGGALWEDVLKRCVSEYGLAPRSWTDYLGLTVGGTLSNAGVSGQAF-RYGPQTSNVTELDVVTGNGD- 202 (524)
T ss_dssp CCSSSSSEEEEEETTCBHHHHHHHHHHHHSEECSCCCSCCSSBHHHHHTTCCCCTTHH-HHCCGGGSEEEEEEEETTSC-
T ss_pred cCCCCCceEEEEeCCcCHHHHHHHHHHHcCCCCCCCCcCCceeecccCCCCCCccccc-ccCcHhhhEEEEEEEecCCe-
Confidence 55 89999999999998555 559999955555566789999999998776654 68999999999999999999
Q ss_pred cccceEEEcCC--ChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeE--EEEecChhHHHHHHHHHHhhc
Q 008595 172 EGYAKIIRIEA--NDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSI--TFNFTDDAHIEDIFMDHAKKH 236 (560)
Q Consensus 172 ~g~~~v~~~~~--~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (560)
+++++. +.++|++++||+|+|||||++||+|.|.++... ...+.+.++..+.+..+.+..
T Consensus 203 -----v~~~~~~~~~dL~~~~~Gs~GtlGiIt~~tl~l~p~p~~~~~~~~~f~~~~~~~~~~~~l~~~~ 266 (524)
T 2exr_A 203 -----VVTCSEIENSELFFSVLGGLGQFGIITRARVLLQPAPDMVRWIRVVYTEFDEFTQDAEWLVSQK 266 (524)
T ss_dssp -----EEEEESSSSHHHHHHHTTCTTSSEEEEEEEEEEEECCSEEEEEEEEESCHHHHHHHHHHHHTSC
T ss_pred -----EEEECCCCChhHHhHhhcCCCccEEEEEEEEEEEEcCCeeEEEEEEeCCHHHHHHHHHHHHHcC
Confidence 887765 356799999999999999999999999998543 334566667777776666543
No 14
>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*
Probab=99.97 E-value=6e-30 Score=283.17 Aligned_cols=202 Identities=18% Similarity=0.178 Sum_probs=168.7
Q ss_pred CCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCC--CCCceEEEEcCCCCCCeeeeCCCcE
Q 008595 24 WGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCS--QSQSTLLISTAKLDSNIDIDVANLT 101 (560)
Q Consensus 24 w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~--~~g~~vvI~l~~ln~i~~id~~~~~ 101 (560)
|.+.+...|.+|++|+|++||+++|+.|++++.+|.++ |+|||+.+.+.+.. .++ ++|||++||+|+++|+++.+
T Consensus 130 ~~g~~~~~p~~vv~P~s~eeV~~iv~~a~~~~~pv~~~-GgGts~~gg~~~~~~~~g~--vvidl~~mn~I~~id~~~~~ 206 (584)
T 2uuu_A 130 RIGQVKNAPDLIVLPHSHEEVERLVQLAHKYNVVIIPM-GGGSNIVGAIEPVSNERFT--VSIDMRRMNKVLWVDRREMT 206 (584)
T ss_dssp HTTCCCCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE-SSCCCSSCTTSCCCCSSCE--EEEECTTCCCEEEEETTTTE
T ss_pred ccCccCCCCCEEEeCCCHHHHHHHHHHHHHcCCeEEEE-eCCCCCCCCCcccCCCCCE--EEEECCCCCccEEEcCCCCE
Confidence 44455678999999999999999999999999999998 89999877665531 234 89999999999999999999
Q ss_pred EEEeCCCCHHHHHHHHHhcCCceeecCCC-CCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEE-
Q 008595 102 VTADAGVPLRQLIDRVEEENLSIVAAPYW-EGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIR- 179 (560)
Q Consensus 102 vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~-~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~- 179 (560)
|+||||+++.+|.++|.++|+.++..|+. ..+||||++++|++|.... +||.+.|+|+++++|+++|+ +++
T Consensus 207 v~v~aGv~~~~l~~~l~~~Gl~~~~~p~s~~~~tvGG~ia~na~G~~~~-~yG~~~d~V~~levVl~dG~------i~~~ 279 (584)
T 2uuu_A 207 ACIQVGIMGPELEKQLHKQGVSLGHDPDSFEFSTLGGWLATCSSGHQSD-KYGDIEDMAVSFRTVTPTGT------LELR 279 (584)
T ss_dssp EEEETTCBHHHHHHHHHHTTEECCCCCTTGGGCBHHHHHHHTCCCTTHH-HHCCHHHHEEEEEEEETTEE------ECCC
T ss_pred EEECCCCcHHHHHHHHHHcCCeeCcCCCccCCeeEeeeccCCCCccccc-CcCcHHHheeeEEEEeCCCC------EEEC
Confidence 99999999999999999999999988863 4589999999999998775 68999999999999999998 443
Q ss_pred ----cCCChhhHHHHHhCCCCeEEEEEEEEEeeeCCceeE--EEEecChhHHHHHHHHHHhh
Q 008595 180 ----IEANDPLLDAAKVSLGLLGVISEVKLSLEPGFKRSI--TFNFTDDAHIEDIFMDHAKK 235 (560)
Q Consensus 180 ----~~~~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 235 (560)
.+.+.+++++++||.|+|||||++||++.|.++... .+.+.+.++..+.+.++.+.
T Consensus 280 ~~~~~~~g~dl~~~~~GseGtlGIIT~~tlrl~p~p~~~~~~~~~f~~~~~a~~~~~~~~~~ 341 (584)
T 2uuu_A 280 NGARSGAGINYKHIILGSEGTLGIITEAVMKVHAVPQAVEYYGFLFPTFAHAVSALQQIRSS 341 (584)
T ss_dssp -------CCCTHHHHTTCTTSSCEEEEEEEECEECCSEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CccccCCCcchhhhhccCCCCcEEEEEEEEEEEecccceEEEEEEcCCHHHHHHHHHHHHhc
Confidence 122456799999999999999999999999987432 33344566666666666553
No 15
>3vte_A Tetrahydrocannabinolic acid synthase; BI-covalent flavinylation, oxidoreductase; HET: NAG FAD; 2.75A {Cannabis sativa}
Probab=99.97 E-value=1.5e-29 Score=275.62 Aligned_cols=184 Identities=20% Similarity=0.248 Sum_probs=157.8
Q ss_pred CCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCcEE
Q 008595 23 AWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANLTV 102 (560)
Q Consensus 23 ~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~~v 102 (560)
.|+.....+|.+|++|+|++||+++|++|++++++|.++ ||||++.+.+...+.+| ++|||++||+| ++|++.++|
T Consensus 45 rw~~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-ggGh~~~g~~~~~~~~g--vvIdl~~l~~i-~vd~~~~~v 120 (518)
T 3vte_A 45 RFISDTTPKPLVIVTPSNNSHIQATILCSKKVGLQIRTR-SGGHDAEGMSYISQVPF--VVVDLRNMHSI-KIDVHSQTA 120 (518)
T ss_dssp GGCSSSSCCCSEEECCCSHHHHHHHHHHHHHHTCEEEEE-SSCCCTTCTTTCCSSSE--EEEECTTCCCE-EEETTTTEE
T ss_pred ccccccCCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEE-CCCcCCCCCccCCCCCe--EEEECCCCcee-EEeCCCCEE
Confidence 488888899999999999999999999999999999999 99999877654223346 99999999997 899999999
Q ss_pred EEeCCCCHHHHHHHHHhcCCceeec-CCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEEcC
Q 008595 103 TADAGVPLRQLIDRVEEENLSIVAA-PYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIRIE 181 (560)
Q Consensus 103 tv~aGv~l~~L~~~l~~~Gl~l~~~-~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~~~ 181 (560)
+||||+++.+|.++|.++|+.+... +..+.++|||.+++|+||.... ++|.++|+|+++++|+++|+ +++..
T Consensus 121 ~V~aG~~l~~l~~~l~~~g~gl~~~~G~~~~vgvgG~~~gGg~G~~s~-~~G~~~D~V~~~evV~adG~------iv~~~ 193 (518)
T 3vte_A 121 WVEAGATLGEVYYWINEKNENLSFPGGYCPTVGVGGHFSGGGYGALMR-NYGLAADNIIDAHLVNVDGK------VLDRK 193 (518)
T ss_dssp EEETTCBHHHHHHHHHHHCTTEECCCCSCTTCBHHHHHHTCCCCTTHH-HHCCGGGGEEEEEEECTTCC------EECHH
T ss_pred EEeCCccHHHHHHHHHHhCCCceecCCCCCCeeeeeeeCCCCCccccC-CCCchhheEEEEEEEccCCe------EEEee
Confidence 9999999999999999986443332 3445589999999999998774 78999999999999999999 77543
Q ss_pred C-ChhhHHHHHhC-CCCeEEEEEEEEEeeeCCceeEEE
Q 008595 182 A-NDPLLDAAKVS-LGLLGVISEVKLSLEPGFKRSITF 217 (560)
Q Consensus 182 ~-~~~~f~a~~gs-~G~lGVIt~vtl~l~p~~~~~~~~ 217 (560)
. +.++|+|++|| +|.|||||++|||++|.++....+
T Consensus 194 ~~~~DLf~a~rGgg~g~fGIVt~~~l~l~p~p~~~~~~ 231 (518)
T 3vte_A 194 SMGEDLFWAIRGGGGENFGIIAAWKIKLVAVPSKSTIF 231 (518)
T ss_dssp HHCHHHHHHHTTSCGGGTCEEEEEEEECEECCSCEEEE
T ss_pred ccccchhhheecccCCCceEEEEEEEEEEeCCCeEEEE
Confidence 2 45679999997 899999999999999998754433
No 16
>3pop_A GILR oxidase; FAD binding protein, gilvocarcin, gilvocarcin biosynthesis, covalently bound FAD, oxidoreductase; HET: FAD; 1.65A {Streptomyces griseoflavus} PDB: 3pqb_A*
Probab=99.97 E-value=4.7e-29 Score=271.46 Aligned_cols=180 Identities=15% Similarity=0.160 Sum_probs=153.6
Q ss_pred eeecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeee
Q 008595 17 LKNAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDID 96 (560)
Q Consensus 17 ~~~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id 96 (560)
+......|+.++...|.+|++|+|++||+++|++|++++++|.++ |+||++.+.+... .+| ++|||++||+| ++|
T Consensus 20 y~~~~~~~n~~~~~~P~~vv~P~s~~dV~~~v~~a~~~~~~v~vr-ggGh~~~g~~~~~-~~g--vvIdl~~l~~i-~vd 94 (501)
T 3pop_A 20 YIELSHSDNHRFVVEPEEFFLPATPDDVVASLQKAVTEGRGVACR-SGGHCGQDFVGTP-RRD--LVLDLHNLHAI-GPA 94 (501)
T ss_dssp HHHHTCCSCTTSCCCCSEEEECSSHHHHHHHHHHHHHTTCCEEEE-SSCCCSSSTTTSS-CCS--EEEECTTCCCE-EEC
T ss_pred hHHHHHHHhhccCCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-eCCccCCCccccC-CCE--EEEEecccCCe-EEc
Confidence 333346799999999999999999999999999999999999999 9999987766431 246 99999999997 999
Q ss_pred CCCcEEEEeCCCCHHHHHHHHH-hcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEe--cCCcccc
Q 008595 97 VANLTVTADAGVPLRQLIDRVE-EENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVV--PAKESEG 173 (560)
Q Consensus 97 ~~~~~vtv~aGv~l~~L~~~l~-~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~--~~G~~~g 173 (560)
++.++|+||||+++.+|.++|. ++|+++|. +..+.++|||.+++|+||.... ++|.++|+|+++++|+ ++|++
T Consensus 95 ~~~~~v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~G~~~~-~~G~~~D~v~~~evV~~da~G~~-- 170 (501)
T 3pop_A 95 ADGAGVRVGSGATVDQVQKALFRRWNAALPL-GACSAVGMGGLVAGGGYGPLSR-QLGLVVDHLHAVEVAVVDESRTV-- 170 (501)
T ss_dssp TTSSSEEEETTCBHHHHHHHHHHHHSBCCCC-CSBTTCBHHHHHHHCCCCTTHH-HHCCGGGGEEEEEEEEECTTSCE--
T ss_pred CCCCEEEEECCcCHHHHHHHHHhhcCeEeCC-CCCCCceEeeccccCCCccccc-ccccHHHhEEEEEEEEecCCCCE--
Confidence 9999999999999999999997 57999875 4555688999999999998774 7899999999999999 88971
Q ss_pred cceEEEcC---C--ChhhHHHHHhC-CCCeEEEEEEEEEe
Q 008595 174 YAKIIRIE---A--NDPLLDAAKVS-LGLLGVISEVKLSL 207 (560)
Q Consensus 174 ~~~v~~~~---~--~~~~f~a~~gs-~G~lGVIt~vtl~l 207 (560)
+++..+ + +.++|||++|| +|+|||||++|||+
T Consensus 171 --~~v~~~~~~~~~~~DLf~a~rG~G~g~fGIVt~~~lk~ 208 (501)
T 3pop_A 171 --RLVTARADDTGDLGELFWAHTGGGGGNFGVVTAYEFRS 208 (501)
T ss_dssp --EEEEEETTCCHHHHHHHHHTTTSCTTSSCEEEEEEECC
T ss_pred --EEEEeccCCCCCCccHHHHhhccCCCCcEEEEEEEEEe
Confidence 123331 2 24679999998 89999999999998
No 17
>1zr6_A Glucooligosaccharide oxidase; alpha + beta, flavoenzyme, oxidoreductase; HET: NAG FAD; 1.55A {Acremonium strictum} PDB: 2axr_A* 3e0t_A* 3hsu_A*
Probab=99.97 E-value=8.6e-29 Score=270.27 Aligned_cols=181 Identities=18% Similarity=0.219 Sum_probs=159.4
Q ss_pred CCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCc
Q 008595 21 YGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANL 100 (560)
Q Consensus 21 ~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~ 100 (560)
...|+.++...|.+|++|+|++||+++|+.|+++++++.++ |+||++.+.+.++..+| ++|||++||+| ++| +.+
T Consensus 32 ~~~~~~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~~~~~~~~~~g--vvIdl~~l~~i-~~d-~~~ 106 (503)
T 1zr6_A 32 GTAFNLRVDYDPAAIAIPRSTEDIAAAVQCGLDAGVQISAK-GGGHSYGSYGFGGEDGH--LMLELDRMYRV-SVD-DNN 106 (503)
T ss_dssp TSCSBGGGCCCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCTTTTSSSSC--EEEECTTCCCE-EEC-TTS
T ss_pred hhhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCCcccCCCCc--EEEECccCCCE-EEC-CCC
Confidence 46798888999999999999999999999999999999999 89999876554322346 99999999998 999 888
Q ss_pred EEEEeCCCCHHHHHHHHHhcC-CceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEEE
Q 008595 101 TVTADAGVPLRQLIDRVEEEN-LSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKIIR 179 (560)
Q Consensus 101 ~vtv~aGv~l~~L~~~l~~~G-l~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~~ 179 (560)
+|+|+||+++.+|.++|.++| +++|. +..+.++|||.+.+|++|.... ++|.++|+|++++||+++|+ +++
T Consensus 107 ~v~v~aG~~~~~l~~~l~~~~gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~~vV~a~G~------i~~ 178 (503)
T 1zr6_A 107 VATIQGGARLGYTALELLDQGNRALSH-GTCPAVGVGGHVLGGGYGFATH-THGLTLDWLIGATVVLADAS------IVH 178 (503)
T ss_dssp CEEEETTCBHHHHHHHHHHTTSEECCC-CSCTTSBHHHHHHHCCCSTTHH-HHCCGGGGEEEEEEECTTSC------EEE
T ss_pred eEEEecCCCHHHHHHHHHHcCCEEeCC-CCCCcCchhhhhcCCCCCcccc-cccChhheEEEEEEEecCCC------EEE
Confidence 999999999999999996664 88885 4555688999999999998874 78999999999999999999 888
Q ss_pred cCC--ChhhHHHHHhCCCCeEEEEEEEEEeeeCCcee
Q 008595 180 IEA--NDPLLDAAKVSLGLLGVISEVKLSLEPGFKRS 214 (560)
Q Consensus 180 ~~~--~~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~ 214 (560)
+++ +.++|+|++||.|.|||||++|||+.|.+...
T Consensus 179 ~~~~~~~dL~~a~rG~~g~~GIVt~~~l~l~p~~~~~ 215 (503)
T 1zr6_A 179 VSETENADLFWALRGGGGGFAIVSEFEFNTFEAPEII 215 (503)
T ss_dssp EBTTBSHHHHHHHTTCCSSSCEEEEEEECCEECCSCE
T ss_pred eCCCCCccHHHHHhccCCCcEEEEEEEEEEEecCcee
Confidence 876 35679999999999999999999999998643
No 18
>2ipi_A Aclacinomycin oxidoreductase (aknox); anthracycline, flavoenzyme, twinning, MAD; HET: AKY FAD; 1.65A {Streptomyces galilaeus}
Probab=99.97 E-value=1.9e-28 Score=268.59 Aligned_cols=178 Identities=17% Similarity=0.181 Sum_probs=154.6
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCcE
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANLT 101 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~~ 101 (560)
++|+.++...|.+|++|+|++||+++|+.|+++++++.++ ||||++.+.+.. ..+| ++|||++||+| ++|++..+
T Consensus 46 ~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~vr-ggGh~~~g~~~~-~~~g--vvIdl~~l~~i-~~d~~~~~ 120 (521)
T 2ipi_A 46 RGFNGRFRGRPDVVYVVHTADQVVDAVNQAMAAGQRIAVR-SGGHCFEGFVDD-PAVR--AVIDMSQMRQV-FYDSGKRA 120 (521)
T ss_dssp CCSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTCGGGC-TTCC--EEEECTTCCCE-EEETTTTE
T ss_pred ccccccccCCCCEEEEcCCHHHHHHHHHHHHHcCCeEEEE-CCCcCCCCCccc-CCCe--EEEecccCCCe-EEeCCCCE
Confidence 7788888999999999999999999999999999999999 899998775532 2346 99999999998 99999999
Q ss_pred EEEeCCCCHHHHHHHHH-hcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecC--CcccccceEE
Q 008595 102 VTADAGVPLRQLIDRVE-EENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPA--KESEGYAKII 178 (560)
Q Consensus 102 vtv~aGv~l~~L~~~l~-~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~--G~~~g~~~v~ 178 (560)
|+||||+++.+|.++|. ++|+++|. +..+.++|||.+.+|++|.... ++|.++|+|++++||++| |+ ++
T Consensus 121 v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------i~ 192 (521)
T 2ipi_A 121 FAVEPGATLGETYRALYLDWGVTIPA-GVCPQVGVGGHVLGGGYGPLSR-RDGVVADHLYAVEVVVVDASGR------AR 192 (521)
T ss_dssp EEECTTSBHHHHHHHHHHHHSBCCCC-CSCTTCBHHHHTTTTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EE
T ss_pred EEEeCCcCHHHHHHHHHHhcCceeCC-CCCCCcccCCcccCCCCCcccc-ccccHhhcEEEEEEEEecCCcc------EE
Confidence 99999999999999997 79999876 4445689999999999998874 789999999999999977 87 53
Q ss_pred Ec--CC--C---hhhHHHHHhC-CCCeEEEEEEEEEe-----------eeCCc
Q 008595 179 RI--EA--N---DPLLDAAKVS-LGLLGVISEVKLSL-----------EPGFK 212 (560)
Q Consensus 179 ~~--~~--~---~~~f~a~~gs-~G~lGVIt~vtl~l-----------~p~~~ 212 (560)
.+ ++ . .++|+|++|| +|+|||||++|||+ .|.++
T Consensus 193 ~~~~~~~~~~~~~DLf~a~rGgg~g~fGIVt~~~l~l~~~~~~~~~~~~p~~~ 245 (521)
T 2ipi_A 193 KVVATSAADDPNRELWWAHTGGGGGNFGIVTRYWFRTPGATGTDPSQLLPKAP 245 (521)
T ss_dssp EEEEECCTTCTTHHHHHHTTTSCSSSSCEEEEEEECCSSCCSSCGGGSSCBCC
T ss_pred EEecccccCCCCHHHHHHHhcCCCCceEEEEEEEEEeecccCCCcccccCCCC
Confidence 32 32 1 2489999984 79999999999999 88765
No 19
>2wdx_A Putative hexose oxidase; oxidoreductase-antibiotic complex, glycopeptide; HET: FAD GHP 3MY 3FG OMY BMA NAG N1L T55; 2.30A {Nonomuraea SP} PDB: 2wdw_A*
Probab=99.97 E-value=3.1e-28 Score=266.80 Aligned_cols=178 Identities=18% Similarity=0.182 Sum_probs=154.7
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCCcE
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVANLT 101 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~~~ 101 (560)
+.|+.+....|.+|++|+|++||+++|+.|+++++++.++ |+||++.+.+.. ..+| ++|||++||+| ++|++..+
T Consensus 48 ~~~n~~~~~~p~~vv~p~s~~dv~~~v~~a~~~~~~~~v~-ggGh~~~g~~~~-~~~g--vvIdl~~m~~i-~~d~~~~~ 122 (523)
T 2wdx_A 48 RGANSRFNGEPDYIHLVGSTQQVADAVEETVRTGKRVAVR-SGGHCFEDFVDN-PDVK--VIIDMSLLTEI-AYDPSMNA 122 (523)
T ss_dssp CSSCTTCCCCCSEEEECSSHHHHHHHHHHHHHHTCCEEEE-SSCCCSSSSSSS-TTCC--EEEECTTCCCE-EEETTTTE
T ss_pred hhhhhcccCCCCEEEEeCCHHHHHHHHHHHHHcCCcEEEE-cCCCCCCCCccC-CCCe--EEEEcccCCCE-EEcCCCCE
Confidence 6788888899999999999999999999999999999999 899998775543 1246 99999999998 99999999
Q ss_pred EEEeCCCCHHHHHHHHH-hcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecC--CcccccceEE
Q 008595 102 VTADAGVPLRQLIDRVE-EENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPA--KESEGYAKII 178 (560)
Q Consensus 102 vtv~aGv~l~~L~~~l~-~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~--G~~~g~~~v~ 178 (560)
|+||||+++.+|.++|. ++|+.++. +..+.++|||.+++|+||.... ++|.+.|+|++++||++| |+ ++
T Consensus 123 v~v~aG~~~~~l~~~l~~~~Gl~~~~-G~~~~vgvgG~~~gGg~g~~s~-~~G~~~D~v~~~evV~~d~~G~------v~ 194 (523)
T 2wdx_A 123 FLIEPGNTLSEVYEKLYLGWNVTIPG-GVCGGVGVGGHICGGGYGPLSR-QFGSVVDYLYAVEVVVVNKQGK------AR 194 (523)
T ss_dssp EEECTTCBHHHHHHHHHHHHSCCCCC-CCCTTCBHHHHHHHTCCCTTHH-HHCCGGGGEEEEEEEEECTTSC------EE
T ss_pred EEEcCCCCHHHHHHHHHHhcCeEEcc-CCCCCCeeCccccCCCCCcccc-cccChhheEEEEEEEEecCCcc------EE
Confidence 99999999999999998 59999887 5556689999999999998874 789999999999999955 87 54
Q ss_pred Ec--CC--C---hhhHHHHHh-CCCCeEEEEEEEEEe-----------eeCCc
Q 008595 179 RI--EA--N---DPLLDAAKV-SLGLLGVISEVKLSL-----------EPGFK 212 (560)
Q Consensus 179 ~~--~~--~---~~~f~a~~g-s~G~lGVIt~vtl~l-----------~p~~~ 212 (560)
.+ ++ + .++|+|++| |+|+|||||++|||+ .|.++
T Consensus 195 ~~~~~~~~~~~~~DLf~a~rGgg~g~~GIVt~~~l~l~~~~~~~~~~~~p~~~ 247 (523)
T 2wdx_A 195 VIVATRERDDPHHDLWWAHTGGGGGNFGVVTKYWMRVPEDVGRNPERLLPKPP 247 (523)
T ss_dssp EEEEESCTTCTTHHHHHHTTTSCSSSSSEEEEEEECCSSCCCSCGGGSSCCCC
T ss_pred EEecccccCCCChHHHHHhhccCCCCcEEEEEEEEEeecccCCCcccccCCCc
Confidence 33 32 2 238999996 579999999999999 88865
No 20
>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*
Probab=99.96 E-value=1.5e-26 Score=255.66 Aligned_cols=179 Identities=17% Similarity=0.190 Sum_probs=147.5
Q ss_pred CCC--CCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCC-CCcccCCCCCceEEEEc-CCCCCCeeeeCCC
Q 008595 24 WGD--RKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIP-KLACPCSQSQSTLLIST-AKLDSNIDIDVAN 99 (560)
Q Consensus 24 w~~--~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~-~l~~~~~~~g~~vvI~l-~~ln~i~~id~~~ 99 (560)
|.. .....|.+|++|+|++||+++|+.|++++.+|.++ |+||+.. +.+.+...+| ++||| ++||+|+++|+++
T Consensus 61 ~~~~~~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~pv~~~-g~Gt~~~~gg~~p~~~~g--vvidl~~~mn~il~id~~~ 137 (560)
T 1e8g_A 61 THVMDQDYFLASAIVAPRNVADVQSIVGLANKFSFPLWPI-SIGRNSGYGGAAPRVSGS--VVLDMGKNMNRVLEVNVEG 137 (560)
T ss_dssp SCCSCTTSSCCSEEECCSSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTCCSSTTC--EEEECTTTCCCEEEEETTT
T ss_pred cccccccccCCcEEEeCCCHHHHHHHHHHHHHcCCcEEEe-cCCCcCCcCCCCCCcCCE--EEEEchHhcCCeEEEcCCC
Confidence 543 46778999999999999999999999999999998 7888764 4443311246 99999 9999999999999
Q ss_pred cEEEEeCCCCHHHHHHHHHhcCCc--eeecCCCC-CccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccce
Q 008595 100 LTVTADAGVPLRQLIDRVEEENLS--IVAAPYWE-GVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAK 176 (560)
Q Consensus 100 ~~vtv~aGv~l~~L~~~l~~~Gl~--l~~~~~~~-~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~ 176 (560)
++|+||||+++.+|.++|.++|+. ++..+... ..||||++++|+.|.+ +||.+.|+|+++++|+++|+
T Consensus 138 ~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~tigG~~~~~g~g~~---~yG~~~d~v~~l~vVl~dG~------ 208 (560)
T 1e8g_A 138 AYCVVEPGVTYHDLHNYLEANNLRDKLWLDVPDLGGGSVLGNAVERGVGYT---PYGDHWMMHSGMEVVLANGE------ 208 (560)
T ss_dssp TEEEECTTCBHHHHHHHHHHTTCTTTEECCCCSSTTSBHHHHHHTTCBCSS---TTCBTGGGEEEEEEEETTSC------
T ss_pred CEEEEeCCCCHHHHHHHHHHcCCccccCCCCCCCCccchhhhccCCCCCcc---cceeHHHheeeeEEEeCCCC------
Confidence 999999999999999999999999 87665443 4799999999888764 68999999999999999999
Q ss_pred EEEcCCC---h----------------hhHHH-HHh----------CCCCeEEEEEEEEEeeeCCcee
Q 008595 177 IIRIEAN---D----------------PLLDA-AKV----------SLGLLGVISEVKLSLEPGFKRS 214 (560)
Q Consensus 177 v~~~~~~---~----------------~~f~a-~~g----------s~G~lGVIt~vtl~l~p~~~~~ 214 (560)
+++++.. + ..+++ ..+ +.|+|||||++||+|.|.++..
T Consensus 209 v~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~Gy~l~~L~~~GtlGiIt~~tl~l~p~p~~~ 276 (560)
T 1e8g_A 209 LLRTGMGALPDPKRPETMGLKPEDQPWSKIAHLFPYGFGPYIDGLFSQSNMGIVTKIGIWLMPNPGGY 276 (560)
T ss_dssp EEECGGGGSCCCCCGGGTTCCGGGSCCCTTTTTCSCCSSCCCGGGGSSSSSEEEEEEEEECEECCSCE
T ss_pred EEEecCcccCcccccccccchhhhhhhhcccccccccCCcchhcccccCcEEEEEEEEEEEEeCCCce
Confidence 7776531 2 33333 222 3479999999999999998754
No 21
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=99.94 E-value=1.4e-25 Score=246.02 Aligned_cols=182 Identities=18% Similarity=0.183 Sum_probs=152.0
Q ss_pred CCCCCC--CCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCC-CCcccCCCCCceEEEEcCCCCCCeeeeCC
Q 008595 22 GAWGDR--KDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIP-KLACPCSQSQSTLLISTAKLDSNIDIDVA 98 (560)
Q Consensus 22 ~~w~~~--~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~-~l~~~~~~~g~~vvI~l~~ln~i~~id~~ 98 (560)
.+|... ....|.+|++|+|++||+++|+.|++++.+|.++ |+||+.. +.+.+...+| ++|||++||+|+++|++
T Consensus 45 ~d~~~~~~~~~~p~~vv~P~s~~ev~~~v~~a~~~~~pv~~~-g~G~~~~~g~~~~~~~~g--vvidl~~m~~i~~id~~ 121 (520)
T 1wvf_A 45 KIMMPVENAAHAPSAAVTATTVEQVQGVVKICNEHKIPIWTI-STGRNFGYGSAAPVQRGQ--VILDLKKMNKIIKIDPE 121 (520)
T ss_dssp CCCSSSCGGGGCCSEEEECCSHHHHHHHHHHHHHHTCCEEEE-SSCCCTTTTTTSCSSTTC--EEEECTTCCCEEEEETT
T ss_pred cccccccccCCCCCEEEecCCHHHHHHHHHHHHHCCCcEEEE-cCCCCCCCCCCCCCCCCe--EEEECCCCCceEEECCC
Confidence 445443 5778999999999999999999999999999999 8898865 5443322347 99999999999999999
Q ss_pred CcEEEEeCCCCHHHHHHHHHhcCCceeec--CCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccce
Q 008595 99 NLTVTADAGVPLRQLIDRVEEENLSIVAA--PYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAK 176 (560)
Q Consensus 99 ~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~--~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~ 176 (560)
+.+|+||||+++.+|.++|.++|+.++.. |+....||||++++|++|.+ +||.+.|+|+++++|+++|+
T Consensus 122 ~~~v~v~aGv~~~~l~~~l~~~Gl~~~~~~~p~~~~~~igG~~~~~g~g~~---~yG~~~d~v~~~evV~~dG~------ 192 (520)
T 1wvf_A 122 MCYALVEPGVTFGQMYDYIQENNLPVMLSFSAPSAIAGPVGNTMDRGVGYT---PYGEHFMMQCGMEVVLANGD------ 192 (520)
T ss_dssp TTEEEECTTCCHHHHHHHHHHTTCSEECCCCSSCTTCCHHHHHHTTCBCSS---TTCBGGGGEEEEEEECTTSC------
T ss_pred CCEEEECCCCCHHHHHHHHHHcCCcccCCCCCCCCeeeeeecccCCCcCCc---cccchhhcEeeeEEEcCCCc------
Confidence 99999999999999999999999998865 54446899999999887764 58999999999999999999
Q ss_pred EEEcCC----ChhhHHHHHhCCC----------CeEEEEEEEEEeeeCCceeE
Q 008595 177 IIRIEA----NDPLLDAAKVSLG----------LLGVISEVKLSLEPGFKRSI 215 (560)
Q Consensus 177 v~~~~~----~~~~f~a~~gs~G----------~lGVIt~vtl~l~p~~~~~~ 215 (560)
+++++. +.++|++.+++.| +|||||++||++.|.++...
T Consensus 193 v~~~~~~~~~~~~l~~~~~~~~Gy~l~~l~~g~~lGiVt~~~l~l~p~p~~~~ 245 (520)
T 1wvf_A 193 VYRTGMGGVPGSNTWQIFKWGYGPTLDGMFTQANYGICTKMGFWLMPKPPVFK 245 (520)
T ss_dssp EEECGGGGSTTCSCTTTCSCCSSCCCHHHHTTSSSCEEEEEEEECEECCSEEE
T ss_pred EEEeCCCcCCCchhHhhhcCCCCcchhhhccCCceEEEEEEEEEEEecCCeEE
Confidence 877753 2234555556654 89999999999999988543
No 22
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=99.93 E-value=4.4e-26 Score=250.82 Aligned_cols=206 Identities=17% Similarity=0.093 Sum_probs=163.4
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCC----CCceEEEEcCCCCCCeeeeC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQ----SQSTLLISTAKLDSNIDIDV 97 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~----~g~~vvI~l~~ln~i~~id~ 97 (560)
++|+ .....|.+|++|+|++||+++|+.|++++.+|.++ |+|||+.+.+.+... +| ++|||++||+|+++|+
T Consensus 37 ~d~~-~~~~~p~~Vv~P~s~~eV~~iv~~a~~~~~~v~~~-GgGt~~~G~~~~~~~~~~r~g--vvIdl~rmn~I~~id~ 112 (571)
T 1f0x_A 37 KGFR-SGQGDALAVVFPGSLLELWRVLKACVTADKIILMQ-AANTGLTEGSTPNGNDYDRDV--VIISTLRLDKLHVLGK 112 (571)
T ss_dssp BCSS-SCBBCCSEEECCSSHHHHHHHHHHHHHTTCEEEEE-SSCCCSSSTTSCCBSCCSSCE--EEEECTTCCCEEEETT
T ss_pred cccc-ccCCCccEEEeeCCHHHHHHHHHHHHHcCCCEEEE-CCCcCCCCCccCCCcCCcCce--EEEECcccCCceeECC
Confidence 4576 46789999999999999999999999999999998 899998877766421 25 9999999999999995
Q ss_pred CCcEEEEeCCCCHHHHHHHHHhcCCceeecCCC--CCccchhhccCCCcCCCCCCCCCcccc----------------ce
Q 008595 98 ANLTVTADAGVPLRQLIDRVEEENLSIVAAPYW--EGVSVGGVISTGAHGSSWWGKGGAVHD----------------HV 159 (560)
Q Consensus 98 ~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~--~~~tvGG~i~tgahGs~~~~~~G~~~d----------------~V 159 (560)
.++|+||||+++.+|.++|.++|+.+|..++. .+.||||+|++|+||.... +||.+.| +|
T Consensus 113 -~~~v~v~aGv~l~~L~~~l~~~Gl~~p~~~g~s~~~~tvGG~ia~nagG~~~~-~yG~~~d~~~~~~~~~~~~l~~~~v 190 (571)
T 1f0x_A 113 -GEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSGGSLVQ-RGPAYTEMSLFARINEDGKLTLVNH 190 (571)
T ss_dssp -TTEEEECTTCBHHHHHHHHGGGTEECSCCCGGGGGTCBHHHHHHTTCCCSCTT-SCSSCCSCEEEEEECTTSCEEEEEC
T ss_pred -CCeEEEcCCcCHHHHHHHHHhcCccCCcCCCccCCCceecccccCCCCccccc-CCCchhhhhhhheeccCCceEEEEe
Confidence 57999999999999999999999988766643 3579999999999998775 7999999 99
Q ss_pred eEEEEEecCCccc-ccce-------EE-----EcCCCh-----------------hhHHHH--HhCCCCeEEEEEEEEEe
Q 008595 160 IGLSLVVPAKESE-GYAK-------II-----RIEAND-----------------PLLDAA--KVSLGLLGVISEVKLSL 207 (560)
Q Consensus 160 ~~~~vV~~~G~~~-g~~~-------v~-----~~~~~~-----------------~~f~a~--~gs~G~lGVIt~vtl~l 207 (560)
+++++|+++|++. .... ++ +.+.+. ++++++ +||+|+||| |++||++
T Consensus 191 l~levVl~dG~i~~~~~~~~~~~~~~~~~~~~k~~~Gy~~~~~~~d~~~p~~~~~Dl~~l~~a~GseGtlGV-t~~tl~l 269 (571)
T 1f0x_A 191 LGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAV-FAVRLDT 269 (571)
T ss_dssp SSBCCCSSHHHHHHHHHTTCCCGGGBCCCSCCSSCTTHHHHHHCTTCSSCSCCTTCGGGCCSSTTCTTSSEE-EEEEEEC
T ss_pred eeEEEEcCCCcEEEecCccccccchhhhcccccccCCcccccccccccccccccccHHHHHHhcCCCCceeE-EEEEEEE
Confidence 9999999999821 0000 00 111223 556666 999999999 9999999
Q ss_pred eeCCceeEEE--EecChhHHHHHHHHHHh
Q 008595 208 EPGFKRSITF--NFTDDAHIEDIFMDHAK 234 (560)
Q Consensus 208 ~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 234 (560)
.|.++....+ .+.+.+++.+.+.++.+
T Consensus 270 ~p~p~~~~~~~~~~~~~~~a~~~~~~~~~ 298 (571)
T 1f0x_A 270 FEAEKNQQVFYIGTNQPEVLTEIRRHILA 298 (571)
T ss_dssp EECCSSCEEEEEEESCHHHHHHHHHHHHH
T ss_pred EecCCeEEEEEEEeCCHHHHHHHHHHHHH
Confidence 9998754332 23455566666666653
No 23
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=99.87 E-value=1.5e-22 Score=208.98 Aligned_cols=167 Identities=20% Similarity=0.212 Sum_probs=134.5
Q ss_pred cCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCCC
Q 008595 20 AYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVAN 99 (560)
Q Consensus 20 ~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~~ 99 (560)
.|.+| ++...|..+++|+|++||+++|+.|++++.++.++ |+||+......+ .+| ++|||++||+| ++|.
T Consensus 39 ~~~t~--~~~~~p~~vv~P~s~eev~~~l~~a~~~~~pv~~~-GgGtnl~~~~~~--~~g--vvI~l~~m~~i-~id~-- 108 (326)
T 1hsk_A 39 RYTYT--KTGGNADFYITPTKNEEVQAVVKYAYQNEIPVTYL-GNGSNIIIREGG--IRG--IVISLLSLDHI-EVSD-- 108 (326)
T ss_dssp GTCTT--SCCCEEEEEECCSSHHHHHHHHHHHHHTTCCEEEE-SSCSSEEECTTC--EEE--EEEECTTCCCE-EEET--
T ss_pred HhccC--CcCCcceEEEEcCCHHHHHHHHHHHHHcCCCEEEE-CCCCccccCCCC--CCe--EEEEeCCCCce-EEcC--
Confidence 35555 36788999999999999999999999999999999 889875432211 135 99999999998 8884
Q ss_pred cEEEEeCCCCHHHHHHHHHhcCCc-eeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceEE
Q 008595 100 LTVTADAGVPLRQLIDRVEEENLS-IVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKII 178 (560)
Q Consensus 100 ~~vtv~aGv~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v~ 178 (560)
.+++|+||+++.+|.++|.++|+. |...+.+++ ||||++++|++| ++|.+.|+|+++++|+++|+ ++
T Consensus 109 ~~v~v~aGv~~~~l~~~l~~~Gl~gLe~~~~~Pg-tvGG~i~~nagg-----yG~~~~d~v~~v~vv~~~G~------i~ 176 (326)
T 1hsk_A 109 DAIIAGSGAAIIDVSRVARDYALTGLEFACGIPG-SIGGAVYMNAGA-----YGGEVKDCIDYALCVNEQGS------LI 176 (326)
T ss_dssp TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCCS-BHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------EE
T ss_pred CEEEEeCCCcHHHHHHHHHHCCCccccccCCCcc-hhhHHHhccccc-----CchhhhhhEEEEEEEeCCCC------EE
Confidence 699999999999999999999994 555556664 999999999986 23489999999999999998 88
Q ss_pred EcCCChh--hHHHH-HhCCCCeEEEEEEEEEeeeC
Q 008595 179 RIEANDP--LLDAA-KVSLGLLGVISEVKLSLEPG 210 (560)
Q Consensus 179 ~~~~~~~--~f~a~-~gs~G~lGVIt~vtl~l~p~ 210 (560)
+++..+. .++.. ..+.| ||||++||++.|.
T Consensus 177 ~~~~~~~~~gyr~~~l~s~g--gIIt~~~l~l~p~ 209 (326)
T 1hsk_A 177 KLTTKELELDYRNSIIQKEH--LVVLEAAFTLAPG 209 (326)
T ss_dssp EEETTTTTCBTTBCHHHHTT--CEEEEEEEECEEC
T ss_pred EEChHHcCCCccccccCCCC--EEEEEEEEEEEcC
Confidence 7765421 12221 12456 9999999999998
No 24
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=99.87 E-value=4e-22 Score=204.77 Aligned_cols=171 Identities=18% Similarity=0.176 Sum_probs=138.9
Q ss_pred ecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCC
Q 008595 19 NAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVA 98 (560)
Q Consensus 19 ~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~ 98 (560)
..|++| ++.+.|..+++|+|++||+++|+.|++++.++.++ |+||++.. ...+.+| ++|||++||+| .+|.
T Consensus 44 ~~~tt~--~igg~p~~vv~P~s~eev~~~v~~a~~~~~pv~v~-GgGsnl~~--~~~~~~g--vvI~l~~~~~I-~~d~- 114 (322)
T 3tx1_A 44 SKYTYT--KTGGAADVFVMPKTIEEAQEVVAYCHQNKIPLTIL-GNGSNLII--KDGGIRG--VILHLDLLQTI-ERNN- 114 (322)
T ss_dssp GGGSTT--SCCCEEEEEEECSSHHHHHHHHHHHHHTTCCEEEE-SCCTTEEE--CTTCEEE--EEEECTTCCCE-EEET-
T ss_pred HHhccC--CcCceeeEEEEeCCHHHHHHHHHHHHHcCCcEEEE-CCccCCCc--CCCCCCe--EEEECCCCCcE-EECC-
Confidence 446667 57889999999999999999999999999999999 88886432 1112235 99999999997 5764
Q ss_pred CcEEEEeCCCCHHHHHHHHHhcCCc-eeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcccccceE
Q 008595 99 NLTVTADAGVPLRQLIDRVEEENLS-IVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESEGYAKI 177 (560)
Q Consensus 99 ~~~vtv~aGv~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~g~~~v 177 (560)
.+|+|+||++|.+|.+++.++||+ +.+..+++ .||||++++|++| ++|.+.|+|+++++|+++|+ +
T Consensus 115 -~~v~v~aG~~~~~l~~~l~~~Gl~Gle~~~giP-gTVGGav~~NaGg-----yGg~~~d~v~~vevV~~~G~------i 181 (322)
T 3tx1_A 115 -TQIVAMSGAKLIDTAKFALNESLSGLEFACGIP-GSIGGALHMNAGA-----YGGEISDVLEAATVLTQTGE------L 181 (322)
T ss_dssp -TEEEEETTSBHHHHHHHHHHTTEESCGGGTTCC-SBHHHHHHHTCEE-----TTEEHHHHEEEEEEECTTSC------E
T ss_pred -CEEEEecCcCHHHHHHHHHHcCCcccccCCCCc-chhHHHHHhCccC-----cccchHhhEEEEEEEcCCCC------E
Confidence 599999999999999999999996 66667777 5999999999986 34799999999999999999 8
Q ss_pred EEcCCChhhHHHHHhCC-C-CeEEEEEEEEEeeeCCc
Q 008595 178 IRIEANDPLLDAAKVSL-G-LLGVISEVKLSLEPGFK 212 (560)
Q Consensus 178 ~~~~~~~~~f~a~~gs~-G-~lGVIt~vtl~l~p~~~ 212 (560)
++++++ +.+++++.+. | ..||||++||+|.|.++
T Consensus 182 ~~~~~~-~~~~~yR~s~~g~~~~IIt~~tl~L~p~~~ 217 (322)
T 3tx1_A 182 KKLKRS-ELKAAYRFSTIAEKNYIVLDATFSLALEEK 217 (322)
T ss_dssp EEEEGG-GCC--CC-CTTTGGGCEEEEEEEECEECCH
T ss_pred EEechH-HcCcchhhcccCCCCEEEEEEEEEEEeCCH
Confidence 888753 4456666542 3 35899999999999874
No 25
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=99.85 E-value=4.4e-21 Score=198.48 Aligned_cols=173 Identities=14% Similarity=0.078 Sum_probs=142.6
Q ss_pred ecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeCC
Q 008595 19 NAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDVA 98 (560)
Q Consensus 19 ~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~~ 98 (560)
..|++| ++.+.|..+++|+|++||+++|++|++++.++.++ |+||+ +...++.+| ++|+++ |+++..+|.+
T Consensus 4 ~~~tt~--~igg~a~~~v~p~s~eel~~~l~~a~~~~~pv~vl-GgGSn---ll~~d~~~G--vVI~l~-~~~i~~i~~~ 74 (340)
T 1uxy_A 4 KPWNTF--GIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVLIL-GEGSN---VLFLEDYRG--TVIINR-IKGIEIHDEP 74 (340)
T ss_dssp GGGSTT--CCCCBEEEEEEESSHHHHHHHHHHHHHTTCCEEEE-SSCTT---EEECSCEEE--EEEEEC-CCCEEEEECS
T ss_pred cccccC--CCCccccEEEEeCCHHHHHHHHHHHHHcCCCEEEE-CCCcC---CcccCCCCe--EEEEcc-CCCcEEEecC
Confidence 346777 47888999999999999999999999999999999 77764 222222346 999996 9998777776
Q ss_pred C-cEEEEeCCCCHHHHHHHHHhcCCc-eeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEec-CCcccccc
Q 008595 99 N-LTVTADAGVPLRQLIDRVEEENLS-IVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVP-AKESEGYA 175 (560)
Q Consensus 99 ~-~~vtv~aGv~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~-~G~~~g~~ 175 (560)
. .+|+|+||++|.+|.+++.++||. +.+..++++ ||||++.+|+++ +++.++|+|+++++|++ +|+
T Consensus 75 ~~~~v~vgAG~~~~~l~~~~~~~Gl~Gle~~~gIPG-tVGGa~~~NaGa-----yG~ei~d~v~~v~vv~~~~G~----- 143 (340)
T 1uxy_A 75 DAWYLHVGAGENWHRLVKYTLQEGMPGLENLALIPG-CVGSSPIQNIGA-----YGVELQRVCAYVDSVELATGK----- 143 (340)
T ss_dssp SEEEEEEETTSBHHHHHHHHHHTTCCSCGGGTTCCS-BGGGTTTTTCEE-----TTEEGGGTEEEEEEEETTTTE-----
T ss_pred CCeEEEEecCCCHHHHHHHHHHCCCCccccccCCcc-chhHHHHhcccc-----chhhHHhheeEEEEEECCCCc-----
Confidence 6 699999999999999999999996 888888885 999999999874 23469999999999997 998
Q ss_pred eEEEcCCChhhHHHHHhC-----CCCeEEEEEEEEEeeeCCce
Q 008595 176 KIIRIEANDPLLDAAKVS-----LGLLGVISEVKLSLEPGFKR 213 (560)
Q Consensus 176 ~v~~~~~~~~~f~a~~gs-----~G~lGVIt~vtl~l~p~~~~ 213 (560)
+++++.+ +.+++.+.| .|.+||||++||++.|.+..
T Consensus 144 -v~~~~~~-d~~~gYR~s~~~~~~~~~gIVt~v~~~L~~~~~~ 184 (340)
T 1uxy_A 144 -QVRLTAK-ECRFGYRDSIFKHEYQDRFAIVAVGLRLPKEWQP 184 (340)
T ss_dssp -EEEEETG-GGTCBTTBCGGGTTTTTTEEEEEEEEEEESSCCC
T ss_pred -EEEEeHH-HhccccCcCccCCcCCCCEEEEEEEEEEEcCCCc
Confidence 8888753 455665544 34689999999999998643
No 26
>3i99_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural of infectious diseases, csgid; HET: FAD; 2.20A {Vibrio cholerae}
Probab=99.85 E-value=2.2e-21 Score=201.37 Aligned_cols=171 Identities=11% Similarity=0.145 Sum_probs=141.4
Q ss_pred ecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCCCceEEEEcCCCCCCeeeeC-
Q 008595 19 NAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQSQSTLLISTAKLDSNIDIDV- 97 (560)
Q Consensus 19 ~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~g~~vvI~l~~ln~i~~id~- 97 (560)
..|++| ++.+.|..++.|+|++||+++|++|++++.++.++ |+||. +...+..+| ++|+++ |++| +++.
T Consensus 20 ~~~tt~--~igg~a~~vv~p~s~eel~~~v~~a~~~~ipv~vl-GgGSN---ll~~d~~~G--vVI~l~-~~~i-~v~~~ 89 (357)
T 3i99_A 20 KPYHTF--GIEQLAAQLVVAESIDDLKALYCSAEWASLPKLII-GKGSN---MLFTCHYTG--MIVVNR-LNGI-EHQQD 89 (357)
T ss_dssp GGGSTT--CCSCEEEEEEEECSHHHHHHHHSSSTTTTSCEEEE-SSCTT---EEECSCEEE--EEEEEC-CCCE-EEEEC
T ss_pred hhhccC--CCCccceEEEEECCHHHHHHHHHHHHHcCCCEEEE-CCCcC---cccCCCCCe--EEEEcC-CCce-EEecc
Confidence 346777 57889999999999999999999999999999999 77774 222222346 999998 9996 6653
Q ss_pred -CCcEEEEeCCCCHHHHHHHHHhcCCc-eeecCCCCCccchhhccCCCcCCCCCCCCC-ccccceeEEEEEec-CCcccc
Q 008595 98 -ANLTVTADAGVPLRQLIDRVEEENLS-IVAAPYWEGVSVGGVISTGAHGSSWWGKGG-AVHDHVIGLSLVVP-AKESEG 173 (560)
Q Consensus 98 -~~~~vtv~aGv~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tgahGs~~~~~~G-~~~d~V~~~~vV~~-~G~~~g 173 (560)
+..+|+|+||++|.+|.+++.++||+ +.++.++++ ||||++++|++ .|| .+.|+|+++++|++ +|+
T Consensus 90 ~~~~~v~v~AG~~~~~l~~~a~~~Gl~GlE~l~gIPG-tVGGav~~NaG------aYG~e~~d~v~~vevv~~~~G~--- 159 (357)
T 3i99_A 90 DDYHRLHVAGGEDWPSLVSWCVEQGIGGLENLALIPG-CAGSAPIQNIG------AYGVEFKDVCDYVEYLCLETGT--- 159 (357)
T ss_dssp SSEEEEEEETTSBHHHHHHHHHHTTCTTCGGGTTCCS-BGGGTTTTTCE------ETTEEGGGTEEEEEEEETTTTE---
T ss_pred CCceEEEEeCCCcHHHHHHHHHHcCCcCccccCCCCc-hhHHHHHhchh------hhhhhHHhhEeEEEEEECCCCc---
Confidence 46689999999999999999999998 888888885 99999999986 355 59999999999999 898
Q ss_pred cceEEEcCCChhhHHHHHhC-----CCCeEEEEEEEEEeeeCCce
Q 008595 174 YAKIIRIEANDPLLDAAKVS-----LGLLGVISEVKLSLEPGFKR 213 (560)
Q Consensus 174 ~~~v~~~~~~~~~f~a~~gs-----~G~lGVIt~vtl~l~p~~~~ 213 (560)
+++++.+ +++++.+.| +|.+||||++||+|.|.+..
T Consensus 160 ---i~~~~~~-dl~f~YR~s~~~~~~g~~gIIt~v~f~L~p~~~~ 200 (357)
T 3i99_A 160 ---VKRLTME-ECQFGYRDSIFKHQLYQKAVVTAVGLKFAKAWQP 200 (357)
T ss_dssp ---EEEEETG-GGCCBTTBCGGGTTTTTTEEEEEEEEEEESSCCC
T ss_pred ---EEEEeHH-HcCcccccccCCCccCCCEEEEEEEEEEEeCCcc
Confidence 8888754 445555543 35799999999999998753
No 27
>2gqt_A UDP-N-acetylenolpyruvylglucosamine reductase; peptidoglycan biosynthesis, enolpyruvyl-UDP-N- acetylglucosamine, flavin adenine dinucleotide; HET: FAD; 1.30A {Thermus caldophilus} PDB: 2gqu_A*
Probab=99.77 E-value=6.5e-19 Score=176.18 Aligned_cols=158 Identities=15% Similarity=0.117 Sum_probs=126.8
Q ss_pred ecCCCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccCCCC-CceEEEEcCCCCCCeeeeC
Q 008595 19 NAYGAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPCSQS-QSTLLISTAKLDSNIDIDV 97 (560)
Q Consensus 19 ~~~~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~~~~-g~~vvI~l~~ln~i~~id~ 97 (560)
..|++| ++...|. +++|+|++||+++| +.++.++ |+||+.. ....+.+ | ++|++++|++| ++|.
T Consensus 12 ~~~tt~--~igg~a~-vv~p~s~edv~~~v------~ipv~v~-GgGsnll--~~d~~~~~G--vVI~l~~~~~I-~vd~ 76 (268)
T 2gqt_A 12 KDYTTL--GVGGPAE-LWTVETREELKRAT------EAPYRVL-GNGSNLL--VLDEGVPER--VIRLAGEFQTY-DLKG 76 (268)
T ss_dssp GGGSSS--CCCCEEE-EEEECSHHHHHHHT------TSCEEEC-SSSSSEE--ECTTCCSSE--EEEECGGGGCB-CTTS
T ss_pred HHhccc--ccCcceE-EEEeCCHHHHHHHh------CCCeEEc-CCCcCce--ecCCCcCCe--EEEEcCCCCCc-EEcC
Confidence 346777 5677788 99999999999999 6899888 7777421 1222233 6 99999999997 5662
Q ss_pred CCcEEEEeCCCCHHHHHHHHHhcCCc-eeecCCCCCccchhhccCCCcCCCCCCCCC-ccccceeEEEEEecCCcccccc
Q 008595 98 ANLTVTADAGVPLRQLIDRVEEENLS-IVAAPYWEGVSVGGVISTGAHGSSWWGKGG-AVHDHVIGLSLVVPAKESEGYA 175 (560)
Q Consensus 98 ~~~~vtv~aGv~l~~L~~~l~~~Gl~-l~~~~~~~~~tvGG~i~tgahGs~~~~~~G-~~~d~V~~~~vV~~~G~~~g~~ 175 (560)
+|+||+++.+|.+++.++||+ +.+..++++ ||||+++||+++ || .++|+|+++++| ++|+
T Consensus 77 -----~v~aG~~~~~l~~~~~~~Gl~Gle~~~giPG-tvGGav~~NaGa------yG~e~~d~v~~v~vv-~~G~----- 138 (268)
T 2gqt_A 77 -----WVGAGTLLPLLVQEAARAGLSGLEGLLGIPA-QVGGAVKMNAGT------RFGEMADALEAVEVF-HDGA----- 138 (268)
T ss_dssp -----EEETTSBHHHHHHHHHHTTEESCGGGTTCCC-BHHHHHHTTCEE------TTEEGGGGEEEEEEE-ETTE-----
T ss_pred -----EEECCCCHHHHHHHHHHcCCcCCccccCccc-hhHHHHHhcccc------CchhHHhheeEEEEE-CCCc-----
Confidence 999999999999999999997 777888885 999999999873 55 799999999999 9998
Q ss_pred eEEEcCCChhhHHHHHhCCCC-eEEEEEEEEEeeeCC
Q 008595 176 KIIRIEANDPLLDAAKVSLGL-LGVISEVKLSLEPGF 211 (560)
Q Consensus 176 ~v~~~~~~~~~f~a~~gs~G~-lGVIt~vtl~l~p~~ 211 (560)
+++++. .+++++.+.+.-. -||||++||+|.|.+
T Consensus 139 -v~~~~~-~~l~~~YR~s~~~~~gIVt~~~~~L~~~~ 173 (268)
T 2gqt_A 139 -FHVYCP-EELGFGYRKSHLPPGGIVTRVRLKLKERP 173 (268)
T ss_dssp -EEEECG-GGSCCBTTBCCCSTTCEEEEEEECCEECC
T ss_pred -EEEEch-HHcccccCCCCcCCCceEEEEEEEEEeCC
Confidence 888875 3456666665411 149999999999984
No 28
>2yvs_A Glycolate oxidase subunit GLCE; oxidoreductase; 2.00A {Thermus thermophilus}
Probab=99.76 E-value=2.4e-18 Score=167.31 Aligned_cols=115 Identities=23% Similarity=0.264 Sum_probs=100.2
Q ss_pred eeeeCCCcEEEEeCCCCHHHHHHHHHhcCCceeecCCCCCccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCccc
Q 008595 93 IDIDVANLTVTADAGVPLRQLIDRVEEENLSIVAAPYWEGVSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKESE 172 (560)
Q Consensus 93 ~~id~~~~~vtv~aGv~l~~L~~~l~~~Gl~l~~~~~~~~~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~~ 172 (560)
+++|+++++|+|+||+++.+|.++|.++|+.++..|+....||||++++|+|| . +||.. |+|+++++|+++|+
T Consensus 1 l~vd~~~~~v~V~aGv~l~~L~~~l~~~Gl~~~~~Pg~~~~tVGG~v~~nagG--~--~yG~~-D~V~~vevV~~dG~-- 73 (219)
T 2yvs_A 1 MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFA--Q--TFFFP-AEVLGLTFRTPKGR-- 73 (219)
T ss_dssp CEEETTTTEEEEETTCCHHHHHHHHTTTTEECSSCSEECTTHHHHHHHTTCSS--B--SSCGG-GGEEEEEEECTTSC--
T ss_pred CeEcCCCCEEEEcCCCcHHHHHHHHHHcCCEEeccCCCCCCchhheeccCccc--c--cCCCc-cEEEEEEEEeCCCC--
Confidence 47899999999999999999999999999999988774334999999999998 2 67888 99999999999998
Q ss_pred ccceEEEcCCC-------hhhHHHHHhCCCCeEEEEEEEEEeeeCCceeEEEE
Q 008595 173 GYAKIIRIEAN-------DPLLDAAKVSLGLLGVISEVKLSLEPGFKRSITFN 218 (560)
Q Consensus 173 g~~~v~~~~~~-------~~~f~a~~gs~G~lGVIt~vtl~l~p~~~~~~~~~ 218 (560)
+++++.. .++|++++|+.|+|||||++||+++|.++....+.
T Consensus 74 ----i~~~~~~~~kn~~gydl~~~~~Gs~G~lGIVt~~tlrl~p~~~~~~~~~ 122 (219)
T 2yvs_A 74 ----RVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRR 122 (219)
T ss_dssp ----EEEEECSSCSSSSCSCHHHHHTTCTTTTCEEEEEEEECEECSEEEEEEE
T ss_pred ----EEEECCccccCCCCcchHHHhccCCCceEEEEEEEEEEEECCcccEEEE
Confidence 7766542 35699999999999999999999999998665543
No 29
>1ffv_C CUTM, flavoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.87.2.1 d.145.1.3 PDB: 1ffu_C*
Probab=98.23 E-value=2.4e-06 Score=86.17 Aligned_cols=159 Identities=16% Similarity=0.115 Sum_probs=93.8
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCC-cccCCCCCceEEEEcCCCCCCeeeeCCCcEEEEeCCCCH
Q 008595 32 VSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKL-ACPCSQSQSTLLISTAKLDSNIDIDVANLTVTADAGVPL 110 (560)
Q Consensus 32 p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l-~~~~~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aGv~l 110 (560)
+-.++.|+|.+|+.++++... .+.+++ +||.+.-.. -......+ ++||++++..+-.+..+...++++||+++
T Consensus 5 ~~~~~~P~s~~ea~~ll~~~~---~~~~il-aGGT~ll~~~~~~~~~~~--~lIdl~~i~eL~~i~~~~~~l~iGA~~tl 78 (287)
T 1ffv_C 5 RFEYHAPKSVGEAVALLGQLG---SDAKLL-AGGHSLLPMMKLRFAQPE--HLIDINRIPELRGIREEGSTVVIGAMTVE 78 (287)
T ss_dssp CCEEECCSSHHHHHHHHHHHG---GGEEEE-SSCTTHHHHHHTTSCCCS--EEEECTTCGGGCCEEEETTEEEEETTCBH
T ss_pred cceEECCCCHHHHHHHHHhcC---CCCEEE-ECchHHHHHHhcCCCCCC--EEEECCCChhhcceEecCCEEEEccCCcH
Confidence 456899999999999998642 467888 666541100 00101234 99999854322223334457999999999
Q ss_pred HHHHHH-HHhcCCc-----eeecCCCC---CccchhhccCCCcCCCCCCCCCcccccee----EEEEEecCCcccccceE
Q 008595 111 RQLIDR-VEEENLS-----IVAAPYWE---GVSVGGVISTGAHGSSWWGKGGAVHDHVI----GLSLVVPAKESEGYAKI 177 (560)
Q Consensus 111 ~~L~~~-l~~~Gl~-----l~~~~~~~---~~tvGG~i~tgahGs~~~~~~G~~~d~V~----~~~vV~~~G~~~g~~~v 177 (560)
.+|.+. +.+.++. +....+.. ..||||+|.++... +.+...++ .++++.++|+
T Consensus 79 ~~l~~~~~~~~~~~~L~~a~~~~a~~qiRN~gTvGGni~~~~~~-------~D~~~~l~Al~A~v~~~~~~G~------- 144 (287)
T 1ffv_C 79 NDLISSPIVQARLPLLAEAAKLIADPQVRNRGTIGGDIAHGDPG-------NDHPALSIAVEAHFVLEGPNGR------- 144 (287)
T ss_dssp HHHHHCHHHHHHCHHHHHHGGGSSCTTGGGTCBHHHHHHTCCTT-------CSHHHHHHHTTCEEEEEETTEE-------
T ss_pred HHHhhChHHHHHhHHHHHHHHHhCCHHHhcceechhhhccCCCc-------HHHHHHHHHcCcEEEEEcCCce-------
Confidence 999963 4444332 22233432 36999999998642 12333333 5788888874
Q ss_pred EEcCCChhhHHHH-HhCCCCeEEEEEEEEEeeeCC
Q 008595 178 IRIEANDPLLDAA-KVSLGLLGVISEVKLSLEPGF 211 (560)
Q Consensus 178 ~~~~~~~~~f~a~-~gs~G~lGVIt~vtl~l~p~~ 211 (560)
+++..+ +.|... ...+.--.||++++|.+.+..
T Consensus 145 r~i~~~-df~~g~~~t~l~~~eii~~i~ip~~~~~ 178 (287)
T 1ffv_C 145 RTVPAD-GFFLGTYMTLLEENEVMVEIRVPAFAQG 178 (287)
T ss_dssp EEEEST-TTEEETTEESCCTTCEEEEEEEECCCTT
T ss_pred EEEEHH-HHhcCcccccCCCCCEEEEEEecCCCCC
Confidence 333322 111111 112222258999999887643
No 30
>1n62_C Carbon monoxide dehydrogenase medium chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.87.2.1 d.145.1.3 PDB: 1n5w_C* 1n61_C* 1n60_C* 1n63_C* 1zxi_C*
Probab=97.48 E-value=0.00019 Score=72.28 Aligned_cols=154 Identities=12% Similarity=0.092 Sum_probs=90.5
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCC-cccCCCCCceEEEEcCCCCCCeeeeCCCcEEEEeCCCCH
Q 008595 32 VSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKL-ACPCSQSQSTLLISTAKLDSNIDIDVANLTVTADAGVPL 110 (560)
Q Consensus 32 p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l-~~~~~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aGv~l 110 (560)
+..++.|+|.+|+.++++.. +.+.+++ +||++.... -......+ ++||++++..+-.|..++..++++|++++
T Consensus 5 ~~~~~~P~sl~ea~~ll~~~---~~~a~~l-aGGT~l~~~~k~~~~~~~--~lIdl~~i~eL~~I~~~~~~l~IGA~~t~ 78 (288)
T 1n62_C 5 SFDYHRPKSIADAVALLTKL---GEDARPL-AGGHSLIPIMKTRLATPE--HLVDLRDIGDLVGIREEGTDVVIGAMTTQ 78 (288)
T ss_dssp CCEEECCSSHHHHHHHHHHH---GGGEEEE-SSCTTHHHHHHTTSCCCS--EEEECTTCGGGSCEEEETTEEEEETTCBH
T ss_pred ceEEECcCCHHHHHHHHHhc---CCCCEEE-ECchHHHHHHhcCCCCCC--EEEECCCChhhcceEecCCEEEEccCCcH
Confidence 44689999999999999754 2357788 777652111 00001124 89999876443334445568999999999
Q ss_pred HHHHH--HHHhcCCcee----ecCCC--C-CccchhhccCCCcCCCCCCCCCcccccee-------EEEEEecCCccccc
Q 008595 111 RQLID--RVEEENLSIV----AAPYW--E-GVSVGGVISTGAHGSSWWGKGGAVHDHVI-------GLSLVVPAKESEGY 174 (560)
Q Consensus 111 ~~L~~--~l~~~Gl~l~----~~~~~--~-~~tvGG~i~tgahGs~~~~~~G~~~d~V~-------~~~vV~~~G~~~g~ 174 (560)
.+|.+ .+.++--.|. ...+. - -.||||.|+++.. .+|.+. .+++..++|+
T Consensus 79 ~~l~~~~~~~~~~p~L~~a~~~ia~~qiRN~gTiGGnl~~a~p----------~sD~~~~L~Al~A~v~l~~~~G~---- 144 (288)
T 1n62_C 79 HALIGSDFLAAKLPIIRETSLLIADPQIRYMGTIGGNAANGDP----------GNDMPALMQCLGAAYELTGPEGA---- 144 (288)
T ss_dssp HHHHHCHHHHHHCHHHHHHHTTSSCHHHHHHCBHHHHHHSCCT----------TCSHHHHHHHHTCEEEEEETTEE----
T ss_pred HHHhcChHHHHHHHHHHHHHHHhCCHHHHccccccchhccCCC----------chHHHHHHHHhCcEEEEEeCCcc----
Confidence 99995 4544211122 11111 1 2599999998742 344433 5667777774
Q ss_pred ceEEEcCCChhhHHH-H-HhCCCCeEEEEEEEEEeeeC
Q 008595 175 AKIIRIEANDPLLDA-A-KVSLGLLGVISEVKLSLEPG 210 (560)
Q Consensus 175 ~~v~~~~~~~~~f~a-~-~gs~G~lGVIt~vtl~l~p~ 210 (560)
+++.. .+|.. . ...+.---||++|.|...+.
T Consensus 145 ---r~v~~--~df~~g~~~t~l~~~eil~~i~ip~~~~ 177 (288)
T 1n62_C 145 ---RIVAA--RDYYQGAYFTAIEPGELLTAIRIPVPPT 177 (288)
T ss_dssp ---EEEEH--HHHEEETTEESCCTTCEEEEEEEECCCT
T ss_pred ---EEEEH--HHHhcCcccccCCCCCEEEEEEeCCCCC
Confidence 33321 12221 1 11232235899999987664
No 31
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=97.41 E-value=5.9e-05 Score=80.76 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=91.5
Q ss_pred cEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccC-CCCCceEEEEcCC---CCCCeeeeCCCcEEEEeCCC
Q 008595 33 SNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPC-SQSQSTLLISTAK---LDSNIDIDVANLTVTADAGV 108 (560)
Q Consensus 33 ~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~-~~~g~~vvI~l~~---ln~i~~id~~~~~vtv~aGv 108 (560)
..++.|+|.+|+.++++.. .+.+++ +||.+.....-.. ...+ ++||+++ |+.| +.+ ...++++||+
T Consensus 178 ~~y~~P~sl~ea~~ll~~~----~~a~il-aGGT~L~~~~k~~~~~~~--~lIdl~~i~eL~~I-~~~--~~~l~IGA~v 247 (462)
T 2w3s_A 178 APAFLPETSDALADWYLAH----PEATLI-AGGTDVSLWVTKALRDLP--EVAFLSHCKDLAQI-RET--PDGYGIGAGV 247 (462)
T ss_dssp -CCBCCSSHHHHHHHHHHC----TTCEEE-SSCTTTTHHHHTSCCCCC--SEEECTTCGGGSCE-EEE--TTEEEEETTC
T ss_pred cEEEecCCHHHHHHHHhhC----CCCEEE-eCCchhhhhhhccCCCCC--EEEEcCCChhhCcE-EEc--CCEEEEccCC
Confidence 3578999999999999763 146778 6665421110011 1224 8999988 4554 443 4579999999
Q ss_pred CHHHHHHHHHhcCCc-e----eecCCCC---CccchhhccCCCcCCCCCCCCCcccccee----EEEEEecCCcccccce
Q 008595 109 PLRQLIDRVEEENLS-I----VAAPYWE---GVSVGGVISTGAHGSSWWGKGGAVHDHVI----GLSLVVPAKESEGYAK 176 (560)
Q Consensus 109 ~l~~L~~~l~~~Gl~-l----~~~~~~~---~~tvGG~i~tgahGs~~~~~~G~~~d~V~----~~~vV~~~G~~~g~~~ 176 (560)
++.+|.+.+. ..+. | ....+.. -.||||.|.++.++ +.+..-++ .+++..++|+
T Consensus 248 tl~~l~~~l~-~~~p~L~~a~~~ia~~qIRN~gTvGGNl~~~sp~-------sD~~~~L~ALdA~v~l~~~~G~------ 313 (462)
T 2w3s_A 248 TIAALRAFAE-GPHPALAGLLRRFASEQVRQVATIGGNIANGSPI-------GDGPPALIAMGASLTLRRGQER------ 313 (462)
T ss_dssp BHHHHHHHHT-TTCHHHHHHHTTSSCHHHHTTCBHHHHHHHTCTT-------CSHHHHHHHTTCEEEEEBTTBC------
T ss_pred cHHHHHHHHH-HHhHHHHHHHHHhCChhheeeEEcccccccCCCc-------chHHHHHHHcCCEEEEEeCCce------
Confidence 9999998843 3332 2 2222222 26999999998864 34555566 6778888774
Q ss_pred EEEcCCChhhHHHHH-hCCCCeEEEEEEEEEeeeC
Q 008595 177 IIRIEANDPLLDAAK-VSLGLLGVISEVKLSLEPG 210 (560)
Q Consensus 177 v~~~~~~~~~f~a~~-gs~G~lGVIt~vtl~l~p~ 210 (560)
+++..+ +.|...+ ..+.-=.||++|+|...+.
T Consensus 314 -R~vp~~-dF~~g~~~t~L~~~Eii~~i~iP~~~~ 346 (462)
T 2w3s_A 314 -RRMPLE-DFFLEYRKQDRRPGEFVESVTLPKSAP 346 (462)
T ss_dssp -CCCBGG-GGEEETTEESCCTTCEEEEEEEESCCS
T ss_pred -EEEEHH-HhhcccccccCCCCcEEEEEEEecCCC
Confidence 222211 1111111 1121125899999987654
No 32
>3nvz_B Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3eub_B* 3etr_B* 3ns1_B* 3nrz_B* 3rca_B* 3sr6_B* 3nvw_B* 3nvv_B* 3nvy_B*
Probab=97.04 E-value=0.0017 Score=65.75 Aligned_cols=160 Identities=14% Similarity=0.080 Sum_probs=92.4
Q ss_pred CCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcc-cCCCCCceEEEEcCCCCCCeeeeCCCcEEEEeCC
Q 008595 29 DCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLAC-PCSQSQSTLLISTAKLDSNIDIDVANLTVTADAG 107 (560)
Q Consensus 29 ~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~-~~~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aG 107 (560)
.+.+..++.|+|.+|+.++++.. . ..+++ +||.+.....- .....+ .+||++++..+-.|..+...++++|+
T Consensus 7 ~g~~~~y~~P~sl~ea~~ll~~~---~-~a~~l-aGGT~l~~~~k~~~~~~~--~lIdl~~i~eL~~I~~~~~~l~IGA~ 79 (305)
T 3nvz_B 7 EGERVTWIQASTLKELLDLKAQH---P-EAKLV-VGNTEIGIEMKFKNQLFP--MIICPAWIPELNAVEHGPEGISFGAA 79 (305)
T ss_dssp ECSSCEEEECCSHHHHHHHHHHC---T-TCEEC-SSCTTHHHHHHHSCCCCS--EEEECTTCGGGGCEEECSSEEEEETT
T ss_pred cCCCeEEEccCCHHHHHHHHHhC---C-CCEEE-ECccHHHHHHhcCCCCCC--EEEECCCChhhcceEECCCeEEEccC
Confidence 34567899999999999988653 1 35677 66654211100 011123 89999886544445555678999999
Q ss_pred CCHHHHHHHHHhc-------------CCc--eeecCCC---CCccchhhccCCCcCCCCCCCCCcccccee----EEEEE
Q 008595 108 VPLRQLIDRVEEE-------------NLS--IVAAPYW---EGVSVGGVISTGAHGSSWWGKGGAVHDHVI----GLSLV 165 (560)
Q Consensus 108 v~l~~L~~~l~~~-------------Gl~--l~~~~~~---~~~tvGG~i~tgahGs~~~~~~G~~~d~V~----~~~vV 165 (560)
+++.+|.+.+.++ .|. +....+. +-.||||.|+++...+- +.--++ .+++.
T Consensus 80 vt~~~l~~~~~~~~~~~p~~~~~~~p~L~~a~~~ia~~qiRN~aTiGGNl~~a~p~sD-------~~~~L~AldA~v~l~ 152 (305)
T 3nvz_B 80 CALSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISD-------LNPVFMASGTKLTIV 152 (305)
T ss_dssp CBHHHHHHHHHHHHHHSCGGGCHHHHHHHHHHTTSSCHHHHTTCBHHHHHHHCCTTCS-------SHHHHHHHTCEEEEE
T ss_pred CcHHHHHHHHHhhhcccchhhhhhhHHHHHHHHHhCCHHHhCeeechheeCCCCCchH-------HHHHHHHcCCEEEEE
Confidence 9999999886532 111 1122222 13699999998875322 222222 46677
Q ss_pred ecCCcccccceEEEcCCChhhHHHH-HhCCCCeEEEEEEEEEeee
Q 008595 166 VPAKESEGYAKIIRIEANDPLLDAA-KVSLGLLGVISEVKLSLEP 209 (560)
Q Consensus 166 ~~~G~~~g~~~v~~~~~~~~~f~a~-~gs~G~lGVIt~vtl~l~p 209 (560)
.++|+ +++.-+++.|... ...+.---||++|.|...+
T Consensus 153 ~~~G~-------R~vp~~~df~~g~~~t~l~~~Eil~~I~iP~~~ 190 (305)
T 3nvz_B 153 SRGTR-------RTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSR 190 (305)
T ss_dssp ETTEE-------EEEECCGGGCCSTTCCSCCTTCEEEEEEEECCC
T ss_pred cCCCc-------EEEEeehHhhcCcccccCCCCcEEEEEEecCCC
Confidence 77774 3333221222211 1122222489999987554
No 33
>1t3q_C Quinoline 2-oxidoreductase medium subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.87.2.1 d.145.1.3
Probab=96.98 E-value=0.001 Score=66.74 Aligned_cols=153 Identities=10% Similarity=0.047 Sum_probs=89.7
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCc-ccCCCCCceEEEEcCCCCCCeeeeCCCcEEEEeCCCCH
Q 008595 32 VSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLA-CPCSQSQSTLLISTAKLDSNIDIDVANLTVTADAGVPL 110 (560)
Q Consensus 32 p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~-~~~~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aGv~l 110 (560)
+-.++.|+|.+|+.++++. +...+++ .||++..... ....... .+||++++..+-.|..++..++++|++++
T Consensus 5 ~f~y~~P~sl~ea~~ll~~----~~~a~~l-aGGT~l~~~~k~~~~~~~--~lIdl~~i~eL~~I~~~~~~l~IGA~vt~ 77 (288)
T 1t3q_C 5 AFSYRAPASLQEVIQVLAD----DPDARII-AGGQSLLPLLAFRLVYPS--CLVDLRNVSELFEISQSAGILSVGAMVTH 77 (288)
T ss_dssp CCEEECCSSHHHHHHHHHH----CTTCEEE-SSCTTHHHHHHTTCCCCS--EEEECTTCGGGGCEEEETTEEEEETTCBH
T ss_pred CceEECCCCHHHHHHHHhh----CCCCEEE-eCchhHHHHHhcCCCCCC--EEEECCCChhhcCeEEcCCEEEEcCCCcH
Confidence 4568999999999999974 2245677 6776521110 0001113 89999986544444445678999999999
Q ss_pred HHHHH--HHHhcCCcee----ecCC--C-CCccchhhccCCCcCCCCCCCCCcccccee-------EEEEEecCCccccc
Q 008595 111 RQLID--RVEEENLSIV----AAPY--W-EGVSVGGVISTGAHGSSWWGKGGAVHDHVI-------GLSLVVPAKESEGY 174 (560)
Q Consensus 111 ~~L~~--~l~~~Gl~l~----~~~~--~-~~~tvGG~i~tgahGs~~~~~~G~~~d~V~-------~~~vV~~~G~~~g~ 174 (560)
.+|.+ .+.++--.|. ..++ + +-.|+||.|+++.. .+|... .+++..++|+
T Consensus 78 ~~l~~~~~~~~~~p~L~~a~~~ias~qiRN~aTiGGNi~~a~p----------~sD~~~~L~Al~A~v~l~~~~g~---- 143 (288)
T 1t3q_C 78 FRNKTDPTVAKCVPILPKVLAHVAHQAVRNRGTLGGSLAHADA----------GAEMPFLMATLGATMYIASSAGV---- 143 (288)
T ss_dssp HHHHHCHHHHHHCTHHHHHHTTSSCHHHHTTCBHHHHHHHTCT----------TCHHHHHHHHTTCEEEEEETTEE----
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCCHHHHcceechhhcccCCC----------cHHHHHHHHHcCcEEEEEcCCce----
Confidence 99997 4443221121 1111 1 12699999985532 355554 6677777774
Q ss_pred ceEEEcCCChhhHHHH--HhCCCCeEEEEEEEEEeeeC
Q 008595 175 AKIIRIEANDPLLDAA--KVSLGLLGVISEVKLSLEPG 210 (560)
Q Consensus 175 ~~v~~~~~~~~~f~a~--~gs~G~lGVIt~vtl~l~p~ 210 (560)
+++.- .+|... ...+.---||++|.|...+.
T Consensus 144 ---R~vp~--~dF~~g~~~t~L~~~Eil~~I~iP~~~~ 176 (288)
T 1t3q_C 144 ---RSVSA--TDFMKGHYFTDLEAGEVLVRVEIPIPAL 176 (288)
T ss_dssp ---EEEEH--HHHEEETTEESCCTTCEEEEEEEECCSS
T ss_pred ---EEEEH--HHHhcCcccccCCCCCEEEEEEecCCCC
Confidence 22321 122211 11232335899999976543
No 34
>3hrd_C Nicotinate dehydrogenase FAD-subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=95.70 E-value=0.0067 Score=61.08 Aligned_cols=107 Identities=17% Similarity=0.083 Sum_probs=65.1
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCC-ceEEEeCCCCCCCCCcccC-CCCCceEEEEcCCCCCCeeeeCCCcEEEEeCCCC
Q 008595 32 VSNVTYPTTEEELRLAVAHANKNKL-KVKTVSKFSHTIPKLACPC-SQSQSTLLISTAKLDSNIDIDVANLTVTADAGVP 109 (560)
Q Consensus 32 p~~v~~P~s~~ev~~iv~~a~~~~~-~v~v~~ggghS~~~l~~~~-~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aGv~ 109 (560)
+-.++.|+|.+|+.++++.. +. ..+++ .||.+.....-.. .... .+||++++..+-.|..+...++++|+++
T Consensus 3 ~f~y~~P~sl~ea~~ll~~~---~~~~a~~l-aGGT~l~~~~k~~~~~~~--~lIdl~~i~eL~~I~~~~~~l~IGA~vt 76 (296)
T 3hrd_C 3 DFEFFAPKTLEEAKGLLHQY---KDVPPAII-AGGTDLVIEINDRWEKPD--VVIDIKKLKELEYIRVEENTIHIGALST 76 (296)
T ss_dssp CCEEECCSSHHHHHHHHHHT---TTSCCEEE-SSCTTHHHHHHTTSCCCS--EEEECTTCGGGCCEEECSSEEEEETTCB
T ss_pred ceeEeCCCCHHHHHHHHHhC---CCCCeEEE-ECCcHHHHHhhcCCCCCC--eEEEcccChhhcceEEcCCeEEEccCCc
Confidence 45688999999999988653 22 35677 6776421110000 1113 8999998765444555677999999999
Q ss_pred HHHHHHH--HHhc--CC--ceeecCC--CC-CccchhhccCCCc
Q 008595 110 LRQLIDR--VEEE--NL--SIVAAPY--WE-GVSVGGVISTGAH 144 (560)
Q Consensus 110 l~~L~~~--l~~~--Gl--~l~~~~~--~~-~~tvGG~i~tgah 144 (560)
+.+|.+. +.++ .| ++....+ +- -.||||.|++..+
T Consensus 77 ~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNi~~a~p 120 (296)
T 3hrd_C 77 FTQIENHPFIRSHVRALYKAASQVGSPQIRNLGTIGGNLSTSSV 120 (296)
T ss_dssp HHHHHHCHHHHHHCHHHHHHHHTSSCHHHHHHCBHHHHHHHTCT
T ss_pred HHHHHhChhhhhHhHHHHHHHHHhCCHHHhcceehhhhhccCCC
Confidence 9999852 2221 01 1111111 11 2699999986544
No 35
>1rm6_B 4-hydroxybenzoyl-COA reductase beta subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.87.2.1 d.145.1.3 PDB: 1sb3_B*
Probab=93.50 E-value=0.042 Score=55.88 Aligned_cols=102 Identities=13% Similarity=0.128 Sum_probs=61.5
Q ss_pred ccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCcccC-CCCCceEEEEcCCCCCCeeeeCC-CcEEEEeCCCC
Q 008595 32 VSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACPC-SQSQSTLLISTAKLDSNIDIDVA-NLTVTADAGVP 109 (560)
Q Consensus 32 p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~~-~~~g~~vvI~l~~ln~i~~id~~-~~~vtv~aGv~ 109 (560)
+-.++.|+|.+|+.++++. ..-+++ .||.+.....-.. .... .+||++++..+-.|..+ ++.++++|+++
T Consensus 6 ~f~y~~P~sl~ea~~ll~~-----~~a~~l-AGGT~l~~~~k~~~~~p~--~lIdi~~i~eL~~I~~~~~~~l~IGA~vt 77 (324)
T 1rm6_B 6 DFRTHRPATLADAVNALAA-----EATLPL-GAGTDLLPNLRRGLGHPA--ALVDLTGIDGLATISTLADGSLRIGAGAT 77 (324)
T ss_dssp CCEEECCSSHHHHHHHTTS-----TTEEEE-SSCTTHHHHHHTTSCCCS--EEEECTTSTTTTCEEECTTSCEEEETTCB
T ss_pred ceEEEccCCHHHHHHHHhC-----CCCEEE-ECchhHHHHHhccCCCCC--EEEECCCChhhcceEECCCCeEEEccCCc
Confidence 3468899999999999862 245677 6666421110000 1113 89999887555445443 34799999999
Q ss_pred HHHHHHH--HHhcC--C--ceeecC--CCCC-ccchhhccC
Q 008595 110 LRQLIDR--VEEEN--L--SIVAAP--YWEG-VSVGGVIST 141 (560)
Q Consensus 110 l~~L~~~--l~~~G--l--~l~~~~--~~~~-~tvGG~i~t 141 (560)
+.+|.+. +.++- | ++.... .+-+ .||||.|..
T Consensus 78 ~~~l~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNl~~ 118 (324)
T 1rm6_B 78 LEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQ 118 (324)
T ss_dssp HHHHHHCHHHHHHSHHHHHHHHHSSCHHHHHHCBHHHHHTC
T ss_pred HHHHHhChHHHHHHHHHHHHHHHhCCHHHcceeEeeeeccc
Confidence 9999874 22210 0 011111 1112 699999974
No 36
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=92.59 E-value=0.18 Score=60.54 Aligned_cols=163 Identities=14% Similarity=0.047 Sum_probs=88.6
Q ss_pred CccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCccc-CCCCCceEEEEcCCCCCCeeeeCCCcEEEEeCCCC
Q 008595 31 HVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACP-CSQSQSTLLISTAKLDSNIDIDVANLTVTADAGVP 109 (560)
Q Consensus 31 ~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~-~~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aGv~ 109 (560)
.+..+++|.|.+|+.++++.. ...+++ .||.+.....-. ..... .+||++++..+-.|..+...++++|+++
T Consensus 232 ~~~~~~~P~sl~ea~~ll~~~----~~a~lv-aGgT~l~~~~k~~~~~~~--~lIdl~~i~EL~~I~~~~~~l~IGA~vt 304 (1332)
T 3unc_A 232 ERVTWIQASTLKELLDLKAQH----PEAKLV-VGNTEIGIEMKFKNQLFP--MIICPAWIPELNAVEHGPEGISFGAACA 304 (1332)
T ss_dssp SSCEEEECCSHHHHHHHHHHC----TTCEEC-SSCTTHHHHHHHSCCCCS--EEEECTTCGGGGCEEECSSEEEEETTCB
T ss_pred CceEEEccCCHHHHHHHHhhC----CCCEEE-EeCcHHHHHhhcCCCCCC--eEEEcCCCHHhCceEEeCCEEEEEecCh
Confidence 345689999999999988653 134566 566542111100 01112 8999988765444555567899999999
Q ss_pred HHHHHHHHHhc-------------CCc--eeecCC--CCC-ccchhhccCCCcCCCCCCCCCccccceeEEEEEecCCcc
Q 008595 110 LRQLIDRVEEE-------------NLS--IVAAPY--WEG-VSVGGVISTGAHGSSWWGKGGAVHDHVIGLSLVVPAKES 171 (560)
Q Consensus 110 l~~L~~~l~~~-------------Gl~--l~~~~~--~~~-~tvGG~i~tgahGs~~~~~~G~~~d~V~~~~vV~~~G~~ 171 (560)
+.+|.+.+.+. .|. +....+ +-+ .||||.|+++.+-+-.. ..+.-.=-.+++..++|+
T Consensus 305 l~~l~~~l~~~~~~~~~~~~~~~p~L~~a~~~ias~qIRN~aTiGGNI~~asp~sD~~---~~LlAl~A~v~l~~~~G~- 380 (1332)
T 3unc_A 305 LSSVEKTLLEAVAKLPTQKTEVFRGVLEQLRWFAGKQVKSVASLGGNIITASPISDLN---PVFMASGTKLTIVSRGTR- 380 (1332)
T ss_dssp HHHHHHHHHHHHHHSCGGGCHHHHHHHHHHHTSSCHHHHHHCBHHHHHHHCCTTCSSH---HHHHHTTCEEEEEETTEE-
T ss_pred HHHHHHHHHHHhhhccccccchhHHHHHHHHHhCCHHHhceeeccceecccCCchhHH---HHHHHcCCEEEEEeCCCc-
Confidence 99999876532 010 111111 111 69999999877633221 011000014556666664
Q ss_pred cccceEEEcCCChhhHHHH-HhCCCCeEEEEEEEEEeeeC
Q 008595 172 EGYAKIIRIEANDPLLDAA-KVSLGLLGVISEVKLSLEPG 210 (560)
Q Consensus 172 ~g~~~v~~~~~~~~~f~a~-~gs~G~lGVIt~vtl~l~p~ 210 (560)
+++.-++..|... ...+.-=-||++|.|...+.
T Consensus 381 ------R~ipl~d~Ff~g~~~t~L~~~Eil~~I~iP~~~~ 414 (1332)
T 3unc_A 381 ------RTVPMDHTFFPSYRKTLLGPEEILLSIEIPYSRE 414 (1332)
T ss_dssp ------EEEECCGGGCCSTTCCSCCTTCEEEEEEEECCCT
T ss_pred ------EEEEhHHhhhhccccccCCCCcEEEEEEecCCCC
Confidence 2232221122211 11222224888888865543
No 37
>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1
Probab=87.07 E-value=0.64 Score=50.85 Aligned_cols=100 Identities=13% Similarity=0.103 Sum_probs=61.6
Q ss_pred EEEEEEEecccHHHHHHHHHHHHHcCCCCcCCccccCceEEeeccCCCCCCCCCCCeEEEEEEEeccCCCCCCcccHHHH
Q 008595 365 YETTAIFPANKFKDFIRDVKKLRDLKPENFCGVDSYNGFLIRFIKASSAYLGQSEDSIVVDYNYYRADDASTPRLNQDVW 444 (560)
Q Consensus 365 ~~~e~~iP~~~~~~~i~~v~~l~~~~~~~~~~~~~~~~i~~Rfv~~s~a~Ls~~~d~~~i~i~~y~~~~~~~p~~~~~~~ 444 (560)
...+.+||++++.++ +++++.++.... ..+-|.-.. ...+.+++..-... .+..+.
T Consensus 456 ~~~Dvavp~~~l~~~-~~~~~~l~~~~~----------~~~~~GH~g-------~g~~H~~~~~~~~~------~~~~i~ 511 (571)
T 1f0x_A 456 LALDIALRRNDTEWY-EHLPPEIDSQLV----------HKLYYGHFM-------CYVFHQDYIVKKGV------DVHALK 511 (571)
T ss_dssp EEEEEECCTTCSCCS-CCCCHHHHTTEE----------EEEEEEETT-------TTEEEEEEEEETTC------CHHHHH
T ss_pred eEEEEEecHHHhHHH-HHHHHHHHhhCc----------cceeEEEEc-------CCceEEeeecCCch------hHHHHH
Confidence 457899999999999 999888874210 001122111 13455555542211 156777
Q ss_pred HHHHHHHHhhcCC-cccccCCCccchhHHHHhccCHHHHHHHHHhcCCCCCCCC
Q 008595 445 EEVEQMAFFKYGA-RPHWAKNRKLAFLNVQQKYANFSRFLAAKNQMDPQNMFSS 497 (560)
Q Consensus 445 ~eie~~~~~k~gG-rPHWgK~~~~~~~~~~~~YP~~~~F~~~r~~~DP~g~F~n 497 (560)
+++-++ +.++|| .+| .|..... |..-..+.++|+.+||+|+|..
T Consensus 512 ~~~~~~-v~~~GGsisa---EHGvG~~-----~~~~~~m~~iK~~~DP~~ilNP 556 (571)
T 1f0x_A 512 EQMLEL-LQQRGAQYPA---EHNVGHL-----YKAPETLQKFYRENDPTNSMNP 556 (571)
T ss_dssp HHHHHH-HHHTTCBSCS---SSCCTTT-----SCCCHHHHHHHHHHCTTCCBST
T ss_pred HHHHHH-HHHcCCeEEe---eccCCcc-----cCCHHHHHHHHHHhCCCCCCCC
Confidence 888887 679999 343 2332222 4211229999999999999854
No 38
>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*
Probab=80.38 E-value=4.3 Score=43.63 Aligned_cols=109 Identities=17% Similarity=0.115 Sum_probs=59.5
Q ss_pred EEEEEec--ccHHHHHHHHHHHHHcCCCCcCCccccCceEEeeccCCCCCCCCCCCeEEEEEE-EeccCCCCCCcccHHH
Q 008595 367 TTAIFPA--NKFKDFIRDVKKLRDLKPENFCGVDSYNGFLIRFIKASSAYLGQSEDSIVVDYN-YYRADDASTPRLNQDV 443 (560)
Q Consensus 367 ~e~~iP~--~~~~~~i~~v~~l~~~~~~~~~~~~~~~~i~~Rfv~~s~a~Ls~~~d~~~i~i~-~y~~~~~~~p~~~~~~ 443 (560)
....+|. +++.+++++++++.++..- . ..+.--. +...+.+.+. .|...++...+..+++
T Consensus 394 ~d~~vp~~~~~l~~~~~~~~~~~~~~~~-----~--~~~~gh~----------gdGnlH~~i~~~~~~~~~~~~~~~~~~ 456 (520)
T 1wvf_A 394 FAPVSEARGSECKKQAAMAKRVLHKYGL-----D--YVAEFIV----------APRDMHHVIDVLYDRTNPEETKRADAC 456 (520)
T ss_dssp ECBEEESCHHHHHHHHHHHHHHHHHTTC-----C--CCEEEEE----------CSSEEEEEEEEEEETTCHHHHHHHHHH
T ss_pred eccccCCCHHHHHHHHHHHHHHHHHcCC-----C--eeEeecc----------cCcceeeeeccccCCCCHHHHHHHHHH
Confidence 3456788 8999999999998875321 0 0111000 1124444442 2322221111123345
Q ss_pred HHHHHHHHHhhcCCcccccCCCc--cchhHHHHhc-c-CHHHHHHHHHhcCCCCCCCC
Q 008595 444 WEEVEQMAFFKYGARPHWAKNRK--LAFLNVQQKY-A-NFSRFLAAKNQMDPQNMFSS 497 (560)
Q Consensus 444 ~~eie~~~~~k~gGrPHWgK~~~--~~~~~~~~~Y-P-~~~~F~~~r~~~DP~g~F~n 497 (560)
++++-+. ..+||. |.... .-.+.+.+.| | .+.-+.++|+.|||+|+|..
T Consensus 457 ~~~~~~~-~~ehG~----G~~k~~~~~~~~~~~~~g~~~~~lmr~IK~a~DP~~IlNP 509 (520)
T 1wvf_A 457 FNELLDE-FEKEGY----AVYRVNTRFQDRVAQSYGPVKRKLEHAIKRAVDPNNILAP 509 (520)
T ss_dssp HHHHHHH-HHHTTC----CBSCCCGGGHHHHHHHTCHHHHHHHHHHHHHHCTTCCBCT
T ss_pred HHHHHHH-HHHcCC----CccccChhHhhhhhhhcCHHHHHHHHHHHHHcCCCCCCCC
Confidence 5555555 356663 44432 1223445666 3 46778999999999999865
No 39
>3q8j_A Asteropsin A, ABU8-1; cystine knot, marine sponge, marine knottin, toxin; HET: PCA; 0.87A {Asteropus}
Probab=78.05 E-value=1.1 Score=28.58 Aligned_cols=29 Identities=38% Similarity=0.805 Sum_probs=21.6
Q ss_pred CCCCCcceeecCCCCCCCCCCCccccCCc
Q 008595 513 DGCALEGQCICSEDRHCSPSKGYFCKPGL 541 (560)
Q Consensus 513 ~~c~~~~~c~c~~d~hc~~~~~~~c~~~~ 541 (560)
+|||.||.-.=-+--.|-|..|-.|-||-
T Consensus 1 egcafegescnvqfypccpglgltcipgn 29 (37)
T 3q8j_A 1 EGCAFEGESCNVQFYPCCPGLGLTCIPGN 29 (37)
T ss_dssp CCCBCTTSEEETTTBCBCTTSCEEEEECS
T ss_pred CCceecCcccceEEecCCCCCCcEecCCC
Confidence 58999995434455667778899998884
No 40
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=73.20 E-value=2.1 Score=51.60 Aligned_cols=78 Identities=15% Similarity=0.083 Sum_probs=50.9
Q ss_pred EEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCCCCCCccc--CCCCCceEEEEcCCCCCCeeeeCCCcEEEEeCCCCHH
Q 008595 34 NVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHTIPKLACP--CSQSQSTLLISTAKLDSNIDIDVANLTVTADAGVPLR 111 (560)
Q Consensus 34 ~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS~~~l~~~--~~~~g~~vvI~l~~ln~i~~id~~~~~vtv~aGv~l~ 111 (560)
..+.|.|.+||.++.+.-- ..+++ .|+-. .++-.. ...-. ++||+.+...+..+...+..++++|+|+|.
T Consensus 242 ~w~~P~tl~el~~l~~~~p----~a~lv-aGnT~-~gl~~~~~~~~~~--~~I~~~~v~EL~~i~~~~~~l~IGA~vtls 313 (1335)
T 3zyv_A 242 TWIAPGTLNDLLELKMKHP----SAPLV-IGNTY-LGLHMKFTDVSYP--IIISPARILELFVVTNTKQGLTLGTGLSLT 313 (1335)
T ss_dssp EEEECSSHHHHHHHHHHCT----TSCBC-SSCTT-HHHHHC--CCCCS--EEECCTTCGGGSCEECCTTEEEEETTCBHH
T ss_pred eEecCCCHHHHHHHHHHCC----CCeEE-Eeccc-ceeeEeecCCCCC--eEEEcCcchhHheEEecCCEEEEcccCcHH
Confidence 4789999999999865422 22344 23211 111111 11112 899988766655566677789999999999
Q ss_pred HHHHHHHh
Q 008595 112 QLIDRVEE 119 (560)
Q Consensus 112 ~L~~~l~~ 119 (560)
++.+.|.+
T Consensus 314 ~~~~~l~~ 321 (1335)
T 3zyv_A 314 QVKNVLSD 321 (1335)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998864
No 41
>2gvs_A Chemosensory protein CSP-SG4; alpha-coil, lipid binding protein; NMR {Schistocerca gregaria}
Probab=66.53 E-value=3.8 Score=34.45 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=26.9
Q ss_pred hHHHHhccCHHHHHHHHHhcCCCCCCCChhhhhh
Q 008595 470 LNVQQKYANFSRFLAAKNQMDPQNMFSSEWSDEI 503 (560)
Q Consensus 470 ~~~~~~YP~~~~F~~~r~~~DP~g~F~n~~~~~~ 503 (560)
..+.+.+| +.|.++.++|||+|.+.+.|-+.+
T Consensus 73 ~~l~~n~P--~~W~~L~~KyDP~g~y~~ky~~~~ 104 (109)
T 2gvs_A 73 KHLINHKP--DVWAQLKAKYDPDGTYSKKYEDRE 104 (109)
T ss_dssp HHHHHHCH--HHHHHHHHHHCTTCTTTHHHHTTT
T ss_pred HHHHHcCh--HHHHHHHHHHCCCchHHHHHHHHH
Confidence 34677777 689999999999999999888764
No 42
>1k19_A Chemosensory protein CSP2; pheromone, lipid transport; NMR {Mamestra brassicae} SCOP: a.118.21.1 PDB: 1kx8_A 1kx9_A 1n8u_A* 1n8v_A* 2jnt_A
Probab=61.06 E-value=3.6 Score=34.79 Aligned_cols=36 Identities=8% Similarity=0.093 Sum_probs=29.0
Q ss_pred hHHHHhccCHHHHHHHHHhcCCCCCCCChhhhhh--cCCC
Q 008595 470 LNVQQKYANFSRFLAAKNQMDPQNMFSSEWSDEI--LFGT 507 (560)
Q Consensus 470 ~~~~~~YP~~~~F~~~r~~~DP~g~F~n~~~~~~--lg~~ 507 (560)
..+.+.+|. .|.++.++|||+|.+.+.|-+.+ .|+.
T Consensus 71 ~~l~~n~P~--~W~~L~~KyDP~g~y~~~y~~~~~~~g~~ 108 (112)
T 1k19_A 71 EHLIKNEIE--IWRELTAKYDPTGNWRKKYEDRAKAAGIV 108 (112)
T ss_dssp HHHHHHHSC--HHHHHHHSSTTTCSSHHHHHHHHHHHCCC
T ss_pred HHHHHcChH--HHHHHHHHHCCCchHHHHHHHHHHHcCCC
Confidence 347788884 79999999999999999988765 3544
No 43
>1cix_A Protein (tachystatin A); antimicrobial peptide, chitin-binding peptide; NMR {Tachypleus tridentatus} SCOP: g.3.6.2
Probab=43.74 E-value=16 Score=24.46 Aligned_cols=29 Identities=34% Similarity=0.957 Sum_probs=20.6
Q ss_pred CCCCcc-eeecCCC----CCCCCCCCcccc---CCcccc
Q 008595 514 GCALEG-QCICSED----RHCSPSKGYFCK---PGLVYT 544 (560)
Q Consensus 514 ~c~~~~-~c~c~~d----~hc~~~~~~~c~---~~~~~~ 544 (560)
-|-++| .|+-..- ..|- .||.|| ||..|-
T Consensus 3 ~c~~~g~~c~v~s~glpt~~cc--~g~~cr~~fpgs~~g 39 (44)
T 1cix_A 3 RCQLQGFNCVVRSYGLPTIPCC--RGLTCRSYFPGSTYG 39 (44)
T ss_dssp CCCCTTEEECSCCTTSCSCCCC--TTCEEEESSTTCSCE
T ss_pred eeEEecceEEEEeCCCCCccee--cceEEcccCCCccce
Confidence 367777 6766665 5666 699998 777764
No 44
>1rzw_A Protein AF2095(GR4); beta-sheet of 4 parallel, anti-parallel beta-strands and 3 alpha-helices, structural genomics, PSI; NMR {Archaeoglobus fulgidus} SCOP: c.131.1.1 PDB: 3erj_A
Probab=30.07 E-value=85 Score=26.69 Aligned_cols=44 Identities=20% Similarity=0.062 Sum_probs=36.6
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHT 67 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS 67 (560)
..|. ..+.+..++...+++|+.++.+.|.+.|++..++.-.|++
T Consensus 41 ~~W~--~~G~~Kvvlk~~~e~el~~L~~~a~~~gl~~~~I~DAG~T 84 (123)
T 1rzw_A 41 RKWL--DEGQKKVVLKVKSLEELLGIKHKAESLGLVTGLVQDAGLT 84 (123)
T ss_dssp HHTG--GGCSSEEEEECSCHHHHHHHHHHHHHTTCCEEEECCTTCC
T ss_pred HHHH--HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEECCCCc
Confidence 5573 3567889999999999999999999999998777567763
No 45
>1xty_A PTH, peptidyl-tRNA hydrolase; mixed beta sheet; 1.80A {Pyrococcus abyssi}
Probab=27.61 E-value=90 Score=26.31 Aligned_cols=43 Identities=9% Similarity=0.148 Sum_probs=36.4
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSH 66 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~gggh 66 (560)
..| ...+.+..|+...+++|+.++.+.|.+.|++..++.-.|+
T Consensus 47 ~~W--~~~g~~KiVlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~ 89 (120)
T 1xty_A 47 NEW--LHQGQPKIIVKVNSLDEIISRAKKAETMNLPFSIIEDAGK 89 (120)
T ss_dssp HHH--HHTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred HHH--HHCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCc
Confidence 456 3467899999999999999999999999999877756776
No 46
>1wn2_A Peptidyl-tRNA hydrolase; riken structural genomics/proteomics initiative, structural genomics; 1.20A {Pyrococcus horikoshii} PDB: 2d3k_A
Probab=27.00 E-value=97 Score=26.16 Aligned_cols=44 Identities=27% Similarity=0.197 Sum_probs=36.7
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHT 67 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS 67 (560)
..|. ..+.+..|+...+++|+.++.+.|.+.|++..++.-.|++
T Consensus 48 ~~W~--~~g~~Kvvlk~~~e~el~~l~~~a~~~gl~~~~i~DAG~T 91 (121)
T 1wn2_A 48 EAWF--REGQKKVVVKVESEEELFKLKAEAEKLGLPNALIRDAGLT 91 (121)
T ss_dssp HHHH--HTTCCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECTTCT
T ss_pred HHHH--HCCCcEEEEecCCHHHHHHHHHHHHHCCCCEEEEEcCCcc
Confidence 4563 5678889999999999999999999999998777567773
No 47
>1rlk_A Hypothetical protein TA0108; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; HET: SO4; 1.95A {Thermoplasma acidophilum} SCOP: c.131.1.1
Probab=22.80 E-value=1e+02 Score=25.89 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=36.6
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCCC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSHT 67 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~ggghS 67 (560)
..|. ..+.+..|+...+++|+.++.+.|.+.|++..++.-.|++
T Consensus 44 ~~W~--~~g~~kiVlk~~~e~~l~~l~~~a~~~gl~~~~v~DAG~T 87 (117)
T 1rlk_A 44 NEWY--DEGQRKIVVKVNDLDEIMEIKRMADSMGIVNEIVQDRGYT 87 (117)
T ss_dssp HHHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEECCCSS
T ss_pred HHHH--HCCCeEEEEecCCHHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 4563 5678999999999999999999999999998777567763
No 48
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=22.33 E-value=1.9e+02 Score=24.54 Aligned_cols=79 Identities=11% Similarity=0.107 Sum_probs=46.8
Q ss_pred CcceEEEEEEEecc--cHHHHHHHHHHHHHc---CCCCcCCccccCceEEeeccCCCCCCCC-CCCeEEEEEEEeccCCC
Q 008595 361 GLFFYETTAIFPAN--KFKDFIRDVKKLRDL---KPENFCGVDSYNGFLIRFIKASSAYLGQ-SEDSIVVDYNYYRADDA 434 (560)
Q Consensus 361 ~~~f~~~e~~iP~~--~~~~~i~~v~~l~~~---~~~~~~~~~~~~~i~~Rfv~~s~a~Ls~-~~d~~~i~i~~y~~~~~ 434 (560)
.+.+.+....++.+ ...+++.++.+.+.. .|+. +.-| .+..+...+.+. .++.+++++.......
T Consensus 20 ~MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKPe~------~v~V--~~~~~~~m~fgGs~dP~a~v~v~sig~~~- 90 (133)
T 3fwt_A 20 HMPFLQTIVSVSLDDQKRANLSAAYGMICREELGKPED------FVMT--AFSDKTPISFQGSTAPAAYVRVESWGEYA- 90 (133)
T ss_dssp EEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHSCTTC------CCEE--EEECSCCCCBTTBCSSCEEEEEEEEECCC-
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHhCcCcC------EEEE--EEECCceEEECCCCCCeEEEEEEECCCCC-
Confidence 46666666677776 447788888776663 4542 2223 333344444443 3678999999876532
Q ss_pred CCCcccHHHHHHHHHH
Q 008595 435 STPRLNQDVWEEVEQM 450 (560)
Q Consensus 435 ~~p~~~~~~~~eie~~ 450 (560)
+...+.+.++|-+.
T Consensus 91 --~e~n~~~s~~i~~~ 104 (133)
T 3fwt_A 91 --PSKPKMMTPRIAAA 104 (133)
T ss_dssp --THHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHH
Confidence 33455666666555
No 49
>2dcv_A Tachystatin-B1; antimicrobial, cystine-knot, antimicrobial protein; NMR {Tachypleus tridentatus} PDB: 2dcw_A
Probab=20.62 E-value=52 Score=22.36 Aligned_cols=23 Identities=35% Similarity=1.089 Sum_probs=18.4
Q ss_pred CCCCcc-eeecCCCCCCCCCCCcccc
Q 008595 514 GCALEG-QCICSEDRHCSPSKGYFCK 538 (560)
Q Consensus 514 ~c~~~~-~c~c~~d~hc~~~~~~~c~ 538 (560)
.|..|| .|.=-...||= +||+|+
T Consensus 3 ~Cv~e~~~CadWsgp~CC--~GyyCs 26 (42)
T 2dcv_A 3 SCLFRGARCRVYSGRSCC--FGYYCR 26 (42)
T ss_dssp CCBCTTCEEETTCSSCBS--TTEEEE
T ss_pred hhhcCCCceecccCCCcc--CCcEEc
Confidence 488887 78776677887 799999
No 50
>2zv3_A PTH, peptidyl-tRNA hydrolase; cytoplasm, structural genomics, NPPSFA; 2.10A {Methanocaldococcus jannaschii}
Probab=20.61 E-value=96 Score=25.91 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=35.0
Q ss_pred CCCCCCCCCCccEEEeCCCHHHHHHHHHHHHhCCCceEEEeCCCC
Q 008595 22 GAWGDRKDCHVSNVTYPTTEEELRLAVAHANKNKLKVKTVSKFSH 66 (560)
Q Consensus 22 ~~w~~~~~~~p~~v~~P~s~~ev~~iv~~a~~~~~~v~v~~gggh 66 (560)
..|. ..+.+..|+...+++|+.++.+.|.+.|++..++.-.|+
T Consensus 42 ~~W~--~~g~~kivlk~~~e~~l~~l~~~a~~~gl~~~~i~DAG~ 84 (115)
T 2zv3_A 42 DEWL--REGQKKVVVKVNSEKELIDIYNKARSEGLPCSIIRDAGH 84 (115)
T ss_dssp HHHH--HTTCCEEEEEESSHHHHHHHHHHHHHHTCCEEEEEECC-
T ss_pred HHHH--HCCCeEEEEecCCHHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 4563 567889999999999999999999999988777755666
Done!