Query 008597
Match_columns 560
No_of_seqs 208 out of 856
Neff 7.1
Searched_HMMs 46136
Date Thu Mar 28 14:10:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008597.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008597hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00207 hypothetical protein; 100.0 1.8E-76 3.9E-81 654.4 34.0 510 10-557 24-570 (591)
2 PF06813 Nodulin-like: Nodulin 100.0 1.7E-51 3.7E-56 411.0 23.6 244 12-269 1-249 (250)
3 KOG2504 Monocarboxylate transp 100.0 3.1E-33 6.8E-38 307.0 22.3 427 12-539 44-476 (509)
4 TIGR00890 2A0111 Oxalate/Forma 100.0 1.3E-27 2.7E-32 248.4 24.7 371 11-532 1-375 (377)
5 TIGR00892 2A0113 monocarboxyla 99.9 1.5E-25 3.2E-30 244.1 27.5 398 9-533 14-415 (455)
6 PRK09556 uhpT sugar phosphate 99.9 1.2E-24 2.5E-29 237.4 32.5 421 3-539 18-449 (467)
7 PRK11273 glpT sn-glycerol-3-ph 99.9 2.5E-24 5.3E-29 233.9 29.0 416 10-553 25-449 (452)
8 PRK11663 regulatory protein Uh 99.9 4.2E-23 9.2E-28 223.0 27.2 396 12-535 21-420 (434)
9 PLN00028 nitrate transmembrane 99.9 4.4E-23 9.5E-28 225.9 25.1 389 13-539 36-433 (476)
10 PRK09705 cynX putative cyanate 99.9 2.4E-22 5.3E-27 214.4 28.7 353 29-538 25-380 (393)
11 COG2271 UhpC Sugar phosphate p 99.9 2.4E-22 5.3E-27 210.1 24.2 385 30-550 46-445 (448)
12 PRK11551 putative 3-hydroxyphe 99.9 4.8E-22 1E-26 211.5 27.1 383 8-538 9-395 (406)
13 PRK03699 putative transporter; 99.9 2.3E-21 4.9E-26 206.5 28.5 373 10-540 3-381 (394)
14 TIGR00893 2A0114 d-galactonate 99.9 1.9E-21 4.2E-26 202.3 26.3 379 29-537 10-397 (399)
15 TIGR00712 glpT glycerol-3-phos 99.9 2.8E-21 6E-26 209.0 26.4 408 11-544 24-438 (438)
16 TIGR02332 HpaX 4-hydroxyphenyl 99.9 2.4E-21 5.2E-26 208.2 21.9 393 11-528 5-410 (412)
17 PRK03545 putative arabinose tr 99.9 2.9E-20 6.4E-25 197.4 29.2 366 11-536 6-377 (390)
18 TIGR00881 2A0104 phosphoglycer 99.9 3E-20 6.5E-25 193.2 24.8 357 28-504 10-374 (379)
19 PRK12307 putative sialic acid 99.9 1.2E-19 2.7E-24 194.2 27.4 362 11-504 15-385 (426)
20 TIGR00891 2A0112 putative sial 99.8 1.4E-19 3.1E-24 190.6 25.0 385 9-524 7-401 (405)
21 TIGR00897 2A0118 polyol permea 99.8 7.7E-19 1.7E-23 187.7 30.8 381 10-539 13-401 (402)
22 TIGR00894 2A0114euk Na(+)-depe 99.8 3.5E-20 7.5E-25 201.6 20.2 372 42-539 70-450 (465)
23 PRK15034 nitrate/nitrite trans 99.8 5.2E-19 1.1E-23 191.9 27.2 388 15-541 35-456 (462)
24 TIGR00896 CynX cyanate transpo 99.8 3.6E-19 7.8E-24 186.4 24.6 332 30-505 17-351 (355)
25 TIGR00895 2A0115 benzoate tran 99.8 2.1E-19 4.5E-24 188.4 18.9 379 9-499 12-397 (398)
26 TIGR00879 SP MFS transporter, 99.8 4.9E-19 1.1E-23 189.5 21.2 396 36-543 51-474 (481)
27 PRK05122 major facilitator sup 99.8 6.3E-18 1.4E-22 179.6 29.4 368 12-538 16-388 (399)
28 PRK11646 multidrug resistance 99.8 4.7E-18 1E-22 182.0 28.1 386 11-551 11-399 (400)
29 PRK09528 lacY galactoside perm 99.8 3.7E-18 8.1E-23 183.3 26.1 381 9-536 9-400 (420)
30 PRK03633 putative MFS family t 99.8 7.1E-18 1.5E-22 178.8 27.9 355 13-532 9-365 (381)
31 PRK10091 MFS transport protein 99.8 8.2E-18 1.8E-22 178.5 27.8 346 30-534 20-371 (382)
32 PRK10504 putative transporter; 99.8 4E-17 8.6E-22 177.6 31.9 385 28-504 25-417 (471)
33 COG2223 NarK Nitrate/nitrite t 99.8 8.5E-18 1.8E-22 176.3 24.9 377 13-543 13-405 (417)
34 cd06174 MFS The Major Facilita 99.8 1.6E-17 3.4E-22 170.4 26.4 332 28-536 14-349 (352)
35 TIGR00903 2A0129 major facilit 99.8 1.2E-17 2.6E-22 177.3 26.3 351 30-535 8-361 (368)
36 PRK03893 putative sialic acid 99.8 1.5E-17 3.3E-22 181.8 27.4 413 6-533 12-447 (496)
37 PRK10213 nepI ribonucleoside t 99.8 3.8E-17 8.2E-22 174.7 28.8 365 9-532 15-384 (394)
38 PRK12382 putative transporter; 99.8 4.2E-17 9E-22 173.1 28.8 350 30-536 33-386 (392)
39 TIGR00711 efflux_EmrB drug res 99.8 2.4E-17 5.2E-22 179.2 27.6 381 32-503 21-411 (485)
40 PRK10077 xylE D-xylose transpo 99.8 3E-17 6.5E-22 178.5 27.0 410 29-559 25-477 (479)
41 PRK10489 enterobactin exporter 99.8 7E-18 1.5E-22 180.8 21.4 376 33-556 37-416 (417)
42 TIGR01299 synapt_SV2 synaptic 99.8 2E-17 4.3E-22 189.1 24.5 431 10-538 163-733 (742)
43 TIGR00900 2A0121 H+ Antiporter 99.8 1.8E-17 4E-22 171.6 22.2 337 37-504 23-365 (365)
44 PRK10642 proline/glycine betai 99.8 7E-17 1.5E-21 177.4 27.7 390 13-538 15-429 (490)
45 PRK09952 shikimate transporter 99.8 1.3E-16 2.9E-21 172.8 29.0 391 9-539 17-433 (438)
46 PRK14995 methyl viologen resis 99.8 2.1E-16 4.6E-21 173.9 31.0 379 32-501 25-412 (495)
47 PRK15402 multidrug efflux syst 99.8 1.9E-16 4E-21 169.1 29.4 355 10-505 9-373 (406)
48 PRK10406 alpha-ketoglutarate t 99.8 2.1E-16 4.7E-21 170.6 30.1 391 6-538 14-423 (432)
49 TIGR00889 2A0110 nucleoside tr 99.8 7.5E-17 1.6E-21 173.9 26.4 195 338-545 200-408 (418)
50 TIGR00898 2A0119 cation transp 99.8 6.9E-18 1.5E-22 185.2 17.4 385 26-538 102-494 (505)
51 PRK09874 drug efflux system pr 99.8 2.3E-16 5E-21 167.4 27.5 181 340-539 212-398 (408)
52 TIGR00710 efflux_Bcr_CflA drug 99.8 2.8E-16 6.1E-21 164.9 27.7 348 11-501 4-360 (385)
53 TIGR00885 fucP L-fucose:H+ sym 99.8 2.2E-16 4.8E-21 170.0 27.1 382 24-527 13-400 (410)
54 TIGR00886 2A0108 nitrite extru 99.8 2.2E-16 4.7E-21 165.0 25.5 336 26-485 14-363 (366)
55 TIGR00887 2A0109 phosphate:H+ 99.7 2E-16 4.3E-21 174.3 23.4 427 10-544 12-493 (502)
56 PRK15075 citrate-proton sympor 99.7 1.3E-15 2.9E-20 164.5 28.7 360 11-504 12-396 (434)
57 TIGR00883 2A0106 metabolite-pr 99.7 6.1E-16 1.3E-20 161.7 24.4 363 29-529 9-391 (394)
58 PRK10054 putative transporter; 99.7 2.9E-16 6.2E-21 167.9 21.8 363 11-532 8-377 (395)
59 PRK11043 putative transporter; 99.7 1.4E-15 3.1E-20 161.8 26.2 349 12-503 5-358 (401)
60 TIGR00899 2A0120 sugar efflux 99.7 2.2E-15 4.7E-20 157.7 27.1 176 341-536 194-371 (375)
61 PF07690 MFS_1: Major Facilita 99.7 1.2E-16 2.7E-21 164.8 17.0 324 34-489 17-349 (352)
62 PRK10473 multidrug efflux syst 99.7 2.9E-15 6.4E-20 158.9 26.3 122 30-172 20-143 (392)
63 TIGR00902 2A0127 phenyl propri 99.7 5.7E-15 1.2E-19 156.8 27.9 175 338-533 197-373 (382)
64 TIGR00882 2A0105 oligosacchari 99.7 1.4E-14 3.1E-19 154.2 28.3 181 338-537 207-393 (396)
65 PRK10133 L-fucose transporter; 99.7 1.5E-14 3.4E-19 157.0 28.5 369 31-529 44-423 (438)
66 PRK11010 ampG muropeptide tran 99.7 1.3E-14 2.8E-19 159.9 27.4 358 37-538 36-402 (491)
67 KOG2532 Permease of the major 99.7 7.5E-16 1.6E-20 168.0 17.1 368 40-538 65-446 (466)
68 PRK11128 putative 3-phenylprop 99.7 3.4E-14 7.3E-19 150.8 28.6 175 338-533 197-373 (382)
69 PRK11102 bicyclomycin/multidru 99.6 3.5E-14 7.7E-19 149.3 25.6 324 31-495 9-342 (377)
70 PRK11652 emrD multidrug resist 99.6 8.7E-14 1.9E-18 147.8 28.2 328 32-502 27-360 (394)
71 PRK06814 acylglycerophosphoeth 99.6 6.3E-14 1.4E-18 168.9 28.3 179 338-534 217-417 (1140)
72 TIGR00792 gph sugar (Glycoside 99.6 3.1E-14 6.8E-19 152.8 23.0 158 338-504 214-382 (437)
73 TIGR00901 2A0125 AmpG-related 99.6 3.9E-14 8.5E-19 148.2 22.7 324 37-483 12-353 (356)
74 PRK11902 ampG muropeptide tran 99.6 1.2E-13 2.5E-18 147.7 26.4 364 24-535 9-386 (402)
75 PRK15011 sugar efflux transpor 99.6 2.8E-13 6E-18 144.5 28.2 153 364-536 234-388 (393)
76 PRK08633 2-acyl-glycerophospho 99.6 1.8E-13 3.8E-18 164.7 29.7 369 33-534 30-405 (1146)
77 TIGR02718 sider_RhtX_FptX side 99.6 1E-12 2.2E-17 139.6 26.2 178 338-534 200-386 (390)
78 COG0738 FucP Fucose permease [ 99.5 2.5E-12 5.4E-17 134.7 26.8 367 33-532 33-402 (422)
79 COG2814 AraJ Arabinose efflux 99.5 6E-12 1.3E-16 133.3 29.7 357 30-544 30-391 (394)
80 PRK11195 lysophospholipid tran 99.5 1.6E-12 3.4E-17 139.1 25.3 373 13-544 5-383 (393)
81 COG2807 CynX Cyanate permease 99.5 2.5E-12 5.3E-17 133.0 25.1 344 31-532 30-378 (395)
82 PRK15403 multidrug efflux syst 99.5 2.1E-12 4.7E-17 139.0 25.2 115 37-172 40-156 (413)
83 PRK09848 glucuronide transport 99.5 4.4E-12 9.4E-17 137.6 24.1 159 339-504 221-390 (448)
84 KOG0569 Permease of the major 99.5 4.8E-11 1E-15 129.9 30.4 400 36-553 42-468 (485)
85 KOG2533 Permease of the major 99.4 1.4E-11 3.1E-16 135.1 23.0 263 39-409 72-337 (495)
86 PRK09669 putative symporter Ya 99.4 2.2E-11 4.7E-16 132.1 23.9 159 338-504 221-390 (444)
87 TIGR00924 yjdL_sub1_fam amino 99.4 7E-10 1.5E-14 121.9 35.9 127 34-181 32-166 (475)
88 KOG2563 Permease of the major 99.4 4.1E-11 8.9E-16 127.1 21.1 412 7-547 38-458 (480)
89 PRK09584 tppB putative tripept 99.4 5.1E-10 1.1E-14 123.8 30.6 412 29-540 37-480 (500)
90 PRK10207 dipeptide/tripeptide 99.3 3.9E-09 8.5E-14 116.5 33.2 124 34-177 36-164 (489)
91 PRK10429 melibiose:sodium symp 99.3 2.9E-10 6.3E-15 124.6 23.6 158 339-504 224-395 (473)
92 PF13347 MFS_2: MFS/sugar tran 99.3 3.3E-10 7.1E-15 122.3 20.0 158 338-503 217-385 (428)
93 TIGR00805 oat sodium-independe 99.2 8.9E-11 1.9E-15 133.3 14.5 291 32-410 52-396 (633)
94 PF11700 ATG22: Vacuole efflux 99.2 8.2E-09 1.8E-13 113.5 27.5 186 337-537 272-466 (477)
95 TIGR01272 gluP glucose/galacto 99.2 1.4E-09 3.1E-14 112.9 20.3 166 340-526 134-302 (310)
96 PRK10091 MFS transport protein 99.2 2.7E-10 6E-15 120.9 13.5 170 346-534 3-173 (382)
97 PRK10504 putative transporter; 99.1 4.3E-10 9.4E-15 122.4 14.2 175 346-539 10-185 (471)
98 KOG3764 Vesicular amine transp 99.1 1.4E-09 3.1E-14 113.8 16.2 345 39-539 95-454 (464)
99 TIGR01299 synapt_SV2 synaptic 99.1 5.2E-10 1.1E-14 128.5 14.3 191 339-536 156-352 (742)
100 PRK09584 tppB putative tripept 99.1 1.2E-09 2.5E-14 120.9 15.5 176 340-534 14-196 (500)
101 TIGR00924 yjdL_sub1_fam amino 99.1 1.6E-09 3.5E-14 119.1 15.6 171 346-535 10-188 (475)
102 PF07690 MFS_1: Major Facilita 99.1 4E-10 8.7E-15 116.2 10.1 166 355-539 5-172 (352)
103 PRK10213 nepI ribonucleoside t 99.1 1.2E-09 2.7E-14 116.8 14.1 153 361-532 35-188 (394)
104 COG2814 AraJ Arabinose efflux 99.1 1.2E-09 2.6E-14 115.9 13.4 174 346-538 13-187 (394)
105 PF01306 LacY_symp: LacY proto 99.1 1.5E-08 3.2E-13 108.6 21.8 186 339-544 213-405 (412)
106 PRK11663 regulatory protein Uh 99.1 1.6E-09 3.5E-14 117.2 14.6 172 344-534 21-193 (434)
107 TIGR00806 rfc RFC reduced fola 99.1 2.4E-08 5.1E-13 108.3 23.2 145 11-178 23-172 (511)
108 PF03825 Nuc_H_symport: Nucleo 99.1 1.1E-07 2.5E-12 102.2 28.4 185 338-535 199-391 (400)
109 TIGR00710 efflux_Bcr_CflA drug 99.1 1.5E-09 3.2E-14 113.9 13.3 173 346-537 4-178 (385)
110 PRK10054 putative transporter; 99.1 1.8E-09 3.8E-14 115.6 14.0 174 346-539 7-182 (395)
111 PRK11462 putative transporter; 99.1 4.3E-08 9.3E-13 107.4 25.0 139 338-481 220-367 (460)
112 TIGR00788 fbt folate/biopterin 99.0 3E-08 6.6E-13 108.8 23.8 389 23-538 35-442 (468)
113 PRK03545 putative arabinose tr 99.0 1.8E-09 3.8E-14 114.8 13.4 171 347-536 10-181 (390)
114 PRK15462 dipeptide/tripeptide 99.0 9.7E-07 2.1E-11 97.4 34.9 158 28-205 24-187 (493)
115 PF00083 Sugar_tr: Sugar (and 99.0 1E-12 2.2E-17 142.0 -12.1 379 49-552 47-449 (451)
116 KOG4686 Predicted sugar transp 99.0 2.9E-09 6.2E-14 106.8 12.9 150 345-505 263-417 (459)
117 TIGR00900 2A0121 H+ Antiporter 99.0 1.6E-09 3.5E-14 112.1 11.5 172 348-538 1-178 (365)
118 PF05977 MFS_3: Transmembrane 99.0 9.2E-08 2E-12 106.4 25.9 183 342-543 214-398 (524)
119 TIGR00893 2A0114 d-galactonate 99.0 9.3E-10 2E-14 114.4 9.0 156 364-538 12-168 (399)
120 PF06609 TRI12: Fungal trichot 99.0 1.7E-07 3.6E-12 104.9 27.3 418 37-542 68-557 (599)
121 TIGR02332 HpaX 4-hydroxyphenyl 99.0 7.5E-09 1.6E-13 111.4 15.6 176 347-535 9-185 (412)
122 cd06174 MFS The Major Facilita 99.0 7E-09 1.5E-13 106.2 14.2 170 349-537 2-172 (352)
123 TIGR00891 2A0112 putative sial 99.0 9.6E-09 2.1E-13 108.2 15.4 168 348-532 14-182 (405)
124 TIGR00712 glpT glycerol-3-phos 99.0 4.8E-09 1E-13 113.6 12.7 177 344-539 25-206 (438)
125 PRK03699 putative transporter; 99.0 7.4E-09 1.6E-13 110.4 14.0 172 346-535 7-179 (394)
126 PRK09528 lacY galactoside perm 98.9 6.7E-09 1.4E-13 111.6 13.3 177 340-538 4-190 (420)
127 PRK09874 drug efflux system pr 98.9 1.2E-08 2.7E-13 108.2 15.0 174 345-538 13-192 (408)
128 TIGR00895 2A0115 benzoate tran 98.9 6.6E-09 1.4E-13 108.8 12.6 153 365-536 36-189 (398)
129 TIGR00711 efflux_EmrB drug res 98.9 7.1E-09 1.5E-13 112.8 13.2 167 353-538 9-176 (485)
130 PRK11652 emrD multidrug resist 98.9 1.5E-08 3.3E-13 107.6 15.2 169 348-535 10-179 (394)
131 PRK11102 bicyclomycin/multidru 98.9 5.6E-09 1.2E-13 109.7 11.3 156 364-538 9-165 (377)
132 TIGR00881 2A0104 phosphoglycer 98.9 4.1E-09 8.9E-14 109.5 9.5 156 364-538 13-170 (379)
133 PRK11551 putative 3-hydroxyphe 98.9 1.4E-08 3.1E-13 108.0 13.9 149 368-535 37-186 (406)
134 PRK11195 lysophospholipid tran 98.9 9.4E-09 2E-13 109.9 12.3 168 345-534 2-169 (393)
135 PRK15402 multidrug efflux syst 98.9 2.2E-08 4.8E-13 106.9 14.8 172 346-536 9-185 (406)
136 PRK15403 multidrug efflux syst 98.9 1.8E-08 3.8E-13 108.6 14.1 157 361-536 31-188 (413)
137 KOG0252 Inorganic phosphate tr 98.9 1.3E-07 2.7E-12 101.0 20.0 169 366-550 324-508 (538)
138 PRK14995 methyl viologen resis 98.9 1.8E-08 3.9E-13 111.1 14.4 167 353-538 13-181 (495)
139 KOG0254 Predicted transporter 98.9 8.5E-07 1.9E-11 98.4 27.7 390 48-557 89-501 (513)
140 PRK11043 putative transporter; 98.9 2.3E-08 5E-13 106.5 14.1 157 362-537 22-179 (401)
141 PRK10473 multidrug efflux syst 98.9 1.6E-08 3.4E-13 107.4 12.6 158 363-539 20-178 (392)
142 TIGR00892 2A0113 monocarboxyla 98.9 2.1E-08 4.6E-13 109.5 13.7 153 366-538 39-193 (455)
143 TIGR00890 2A0111 Oxalate/Forma 98.9 1.8E-08 3.8E-13 104.6 12.1 155 364-538 21-176 (377)
144 TIGR01301 GPH_sucrose GPH fami 98.8 6.4E-07 1.4E-11 98.4 24.5 182 346-543 258-475 (477)
145 PRK03893 putative sialic acid 98.8 3.5E-08 7.6E-13 108.0 14.7 163 346-527 20-183 (496)
146 TIGR00886 2A0108 nitrite extru 98.8 3.1E-08 6.6E-13 103.5 13.5 172 347-532 2-181 (366)
147 COG2270 Permeases of the major 98.8 2.8E-07 6.2E-12 97.7 20.6 180 337-534 243-424 (438)
148 PRK12307 putative sialic acid 98.8 5.3E-08 1.1E-12 104.3 15.5 160 348-526 20-180 (426)
149 PRK10489 enterobactin exporter 98.8 1.6E-08 3.4E-13 108.5 11.3 177 340-535 11-193 (417)
150 PLN00028 nitrate transmembrane 98.8 8.6E-08 1.9E-12 105.3 16.6 177 347-538 37-218 (476)
151 TIGR00882 2A0105 oligosacchari 98.8 5.3E-08 1.1E-12 103.7 14.5 170 345-536 1-180 (396)
152 PRK12382 putative transporter; 98.8 4.8E-08 1E-12 103.7 14.0 166 343-527 12-187 (392)
153 PRK11646 multidrug resistance 98.8 8.5E-08 1.8E-12 102.8 15.6 171 345-536 10-182 (400)
154 PRK15462 dipeptide/tripeptide 98.8 9.5E-08 2.1E-12 105.3 15.8 170 346-534 9-184 (493)
155 PRK10207 dipeptide/tripeptide 98.8 1.2E-07 2.5E-12 104.8 16.2 168 346-532 14-187 (489)
156 KOG1330 Sugar transporter/spin 98.8 1.1E-08 2.3E-13 109.2 7.6 104 36-160 56-161 (493)
157 TIGR00879 SP MFS transporter, 98.8 5.2E-08 1.1E-12 104.3 13.0 150 366-534 48-212 (481)
158 TIGR00897 2A0118 polyol permea 98.8 5.5E-08 1.2E-12 104.1 13.1 151 347-504 15-170 (402)
159 COG2271 UhpC Sugar phosphate p 98.8 4.3E-08 9.3E-13 103.8 11.1 178 342-538 25-205 (448)
160 PRK09705 cynX putative cyanate 98.7 1.6E-07 3.5E-12 100.3 15.4 168 346-532 6-177 (393)
161 PRK09556 uhpT sugar phosphate 98.7 1.1E-07 2.4E-12 103.9 14.0 154 368-537 51-210 (467)
162 PRK15034 nitrate/nitrite trans 98.7 2.7E-07 5.8E-12 100.8 16.6 186 345-538 33-231 (462)
163 KOG0253 Synaptic vesicle trans 98.7 1.3E-06 2.8E-11 91.0 20.4 403 27-543 92-523 (528)
164 PRK11273 glpT sn-glycerol-3-ph 98.7 2.5E-07 5.4E-12 100.7 16.3 152 369-539 52-208 (452)
165 TIGR00903 2A0129 major facilit 98.7 1.5E-07 3.3E-12 100.1 12.3 153 365-537 10-163 (368)
166 KOG0255 Synaptic vesicle trans 98.7 3.7E-06 7.9E-11 93.2 23.7 141 32-195 101-244 (521)
167 PRK05122 major facilitator sup 98.6 3.8E-07 8.2E-12 97.0 14.4 167 346-531 15-191 (399)
168 PRK03633 putative MFS family t 98.6 2.8E-07 6E-12 97.8 13.3 152 344-502 4-156 (381)
169 PTZ00207 hypothetical protein; 98.6 4.3E-07 9.4E-12 101.9 15.1 170 347-538 26-204 (591)
170 TIGR00894 2A0114euk Na(+)-depe 98.6 1.1E-07 2.3E-12 103.7 9.0 145 375-538 70-218 (465)
171 PF06609 TRI12: Fungal trichot 98.6 5E-07 1.1E-11 101.2 13.3 175 344-539 38-217 (599)
172 TIGR00896 CynX cyanate transpo 98.6 5.7E-07 1.2E-11 94.2 12.9 147 367-531 21-167 (355)
173 TIGR00880 2_A_01_02 Multidrug 98.6 1.7E-07 3.6E-12 82.8 7.4 131 387-536 4-135 (141)
174 TIGR00899 2A0120 sugar efflux 98.5 9.2E-07 2E-11 92.5 13.3 154 366-537 17-174 (375)
175 PRK10077 xylE D-xylose transpo 98.5 6.9E-07 1.5E-11 97.3 12.6 148 377-535 51-211 (479)
176 TIGR00898 2A0119 cation transp 98.5 2.3E-07 5.1E-12 101.9 8.0 146 369-536 112-261 (505)
177 TIGR00902 2A0127 phenyl propri 98.5 1.2E-06 2.7E-11 93.0 13.2 163 347-527 5-167 (382)
178 PRK06814 acylglycerophosphoeth 98.5 1.2E-06 2.7E-11 106.0 14.3 183 340-537 5-193 (1140)
179 PRK11128 putative 3-phenylprop 98.5 8.3E-07 1.8E-11 94.2 11.3 168 345-532 4-172 (382)
180 PRK08633 2-acyl-glycerophospho 98.4 2.3E-06 4.9E-11 103.4 14.5 156 340-502 3-165 (1146)
181 TIGR00805 oat sodium-independe 98.4 6.3E-07 1.4E-11 102.1 8.9 160 368-534 55-276 (633)
182 PRK11010 ampG muropeptide tran 98.4 4.1E-06 8.9E-11 92.6 14.7 159 364-537 30-193 (491)
183 COG2211 MelB Na+/melibiose sym 98.4 4.7E-05 1E-09 82.9 22.2 138 339-483 229-378 (467)
184 PRK10642 proline/glycine betai 98.4 8.3E-06 1.8E-10 89.9 16.8 155 367-532 37-206 (490)
185 PRK15011 sugar efflux transpor 98.3 7.4E-06 1.6E-10 87.4 14.4 173 345-536 14-191 (393)
186 TIGR00885 fucP L-fucose:H+ sym 98.3 7.4E-06 1.6E-10 88.4 13.8 179 347-533 4-201 (410)
187 PRK09952 shikimate transporter 98.3 2.8E-05 6.1E-10 84.4 18.0 129 391-530 74-211 (438)
188 TIGR01301 GPH_sucrose GPH fami 98.3 8.5E-06 1.9E-10 89.6 13.7 174 364-539 22-218 (477)
189 TIGR00887 2A0109 phosphate:H+ 98.2 1.3E-05 2.9E-10 88.4 14.5 148 380-534 55-220 (502)
190 PRK10406 alpha-ketoglutarate t 98.2 2.4E-05 5.1E-10 84.7 15.8 147 370-531 46-211 (432)
191 TIGR00806 rfc RFC reduced fola 98.2 1.2E-05 2.5E-10 87.7 13.1 161 369-547 49-211 (511)
192 KOG3764 Vesicular amine transp 98.2 3.9E-06 8.5E-11 88.4 9.1 149 376-543 101-251 (464)
193 PRK10133 L-fucose transporter; 98.2 2.2E-05 4.9E-10 85.4 14.8 136 347-488 27-166 (438)
194 PRK11902 ampG muropeptide tran 98.2 1.5E-05 3.3E-10 85.1 13.1 153 367-534 20-177 (402)
195 TIGR00901 2A0125 AmpG-related 98.2 1.3E-05 2.7E-10 83.9 11.7 163 367-537 9-176 (356)
196 KOG2533 Permease of the major 98.1 1.7E-05 3.7E-10 87.5 11.3 153 374-538 74-226 (495)
197 TIGR00792 gph sugar (Glycoside 98.1 1.4E-05 3.1E-10 85.8 10.5 164 366-536 19-191 (437)
198 COG3104 PTR2 Dipeptide/tripept 98.1 2.1E-05 4.6E-10 85.3 10.7 147 372-536 52-203 (498)
199 PRK15075 citrate-proton sympor 98.1 0.00013 2.8E-09 79.0 17.0 119 364-488 33-166 (434)
200 PF05977 MFS_3: Transmembrane 98.0 3.3E-05 7.2E-10 86.1 12.3 175 339-532 3-183 (524)
201 KOG1330 Sugar transporter/spin 98.0 2.8E-06 6E-11 91.1 3.2 155 368-540 55-210 (493)
202 PF03137 OATP: Organic Anion T 98.0 1.3E-06 2.8E-11 97.5 -0.0 74 337-410 296-371 (539)
203 TIGR00883 2A0106 metabolite-pr 98.0 8.2E-05 1.8E-09 77.6 13.0 130 393-533 47-185 (394)
204 KOG0255 Synaptic vesicle trans 98.0 5E-05 1.1E-09 84.2 11.6 139 378-538 115-254 (521)
205 PF03209 PUCC: PUCC protein; 97.9 0.0018 4E-08 69.1 22.2 191 338-534 200-393 (403)
206 KOG2532 Permease of the major 97.9 6.6E-05 1.4E-09 82.5 10.5 146 376-540 68-217 (466)
207 COG2223 NarK Nitrate/nitrite t 97.8 0.0003 6.5E-09 74.9 13.7 122 371-500 39-167 (417)
208 PF03092 BT1: BT1 family; Int 97.8 0.0014 3.1E-08 71.4 19.3 112 35-158 12-126 (433)
209 COG3104 PTR2 Dipeptide/tripept 97.8 0.024 5.2E-07 62.0 28.0 147 43-208 56-207 (498)
210 KOG0254 Predicted transporter 97.8 0.00021 4.6E-09 79.3 12.8 133 384-534 92-225 (513)
211 TIGR00889 2A0110 nucleoside tr 97.7 0.00016 3.5E-09 78.2 10.4 175 13-207 211-403 (418)
212 KOG2504 Monocarboxylate transp 97.7 0.00015 3.2E-09 80.7 10.0 150 370-539 70-221 (509)
213 COG2807 CynX Cyanate permease 97.6 0.00072 1.6E-08 71.0 13.3 172 349-539 11-186 (395)
214 TIGR00880 2_A_01_02 Multidrug 97.6 0.00048 1.1E-08 60.4 10.6 97 64-181 15-112 (141)
215 TIGR00926 2A1704 Peptide:H+ sy 97.6 0.00064 1.4E-08 77.7 13.5 151 374-536 16-179 (654)
216 TIGR02718 sider_RhtX_FptX side 97.6 0.00036 7.8E-09 74.1 10.8 156 365-538 20-183 (390)
217 PRK09669 putative symporter Ya 97.6 0.00077 1.7E-08 73.2 13.5 159 368-537 31-202 (444)
218 PF03825 Nuc_H_symport: Nucleo 97.6 0.00048 1E-08 74.3 11.2 129 351-489 10-143 (400)
219 PF01306 LacY_symp: LacY proto 97.6 6E-05 1.3E-09 81.1 4.1 70 343-412 4-74 (412)
220 KOG2615 Permease of the major 97.5 0.0042 9.1E-08 65.7 17.0 123 374-501 290-413 (451)
221 PRK09848 glucuronide transport 97.5 0.00076 1.6E-08 73.3 12.0 108 371-478 33-149 (448)
222 TIGR00788 fbt folate/biopterin 97.4 0.0012 2.6E-08 72.6 12.5 179 344-539 24-209 (468)
223 KOG2615 Permease of the major 97.3 0.00056 1.2E-08 72.1 7.6 124 370-501 53-181 (451)
224 PF13347 MFS_2: MFS/sugar tran 97.3 0.00066 1.4E-08 73.3 8.5 165 368-539 23-198 (428)
225 PRK10429 melibiose:sodium symp 97.3 0.003 6.5E-08 69.4 13.3 120 367-487 27-155 (473)
226 KOG3626 Organic anion transpor 97.1 0.012 2.6E-07 67.4 15.6 73 337-409 383-457 (735)
227 TIGR01272 gluP glucose/galacto 97.0 0.0073 1.6E-07 62.7 11.9 121 37-180 165-288 (310)
228 PF00083 Sugar_tr: Sugar (and 96.9 3.9E-05 8.4E-10 83.0 -5.7 136 383-535 48-188 (451)
229 KOG2325 Predicted transporter/ 96.9 0.064 1.4E-06 59.0 19.0 86 446-544 395-480 (488)
230 PF01770 Folate_carrier: Reduc 96.8 0.11 2.5E-06 56.0 19.6 155 339-503 240-400 (412)
231 PRK11462 putative transporter; 96.8 0.018 4E-07 63.1 14.1 114 374-488 38-159 (460)
232 PF06813 Nodulin-like: Nodulin 96.7 0.013 2.8E-07 59.2 10.5 123 363-493 19-149 (250)
233 COG2211 MelB Na+/melibiose sym 96.6 0.037 8E-07 60.6 14.4 118 368-488 34-162 (467)
234 KOG2816 Predicted transporter 96.6 0.091 2E-06 57.9 17.2 123 376-506 272-396 (463)
235 PF03209 PUCC: PUCC protein; 96.4 0.023 5E-07 60.8 10.9 162 372-547 6-184 (403)
236 KOG0569 Permease of the major 96.3 0.02 4.3E-07 63.2 9.9 137 384-538 63-204 (485)
237 KOG0252 Inorganic phosphate tr 96.2 0.023 4.9E-07 61.6 9.7 95 382-482 85-187 (538)
238 KOG3098 Uncharacterized conser 95.9 1.8 3.9E-05 47.6 22.8 92 55-168 58-150 (461)
239 TIGR00939 2a57 Equilibrative N 95.9 0.43 9.3E-06 52.2 18.0 51 121-175 106-156 (437)
240 PF05631 DUF791: Protein of un 95.7 0.87 1.9E-05 48.2 18.6 87 28-141 54-141 (354)
241 COG0477 ProP Permeases of the 95.6 0.24 5.3E-06 48.0 13.5 145 368-529 24-175 (338)
242 PF03092 BT1: BT1 family; Int 95.3 0.11 2.5E-06 56.6 11.0 154 372-540 16-176 (433)
243 COG2270 Permeases of the major 95.1 0.31 6.7E-06 52.5 12.9 143 14-180 256-400 (438)
244 COG0738 FucP Fucose permease [ 94.9 0.31 6.8E-06 52.2 12.3 160 370-536 37-207 (422)
245 PF02487 CLN3: CLN3 protein; 94.9 6.9 0.00015 42.4 24.2 97 385-489 285-385 (402)
246 PF11700 ATG22: Vacuole efflux 94.4 1.2 2.5E-05 49.5 15.8 124 26-169 295-425 (477)
247 KOG3098 Uncharacterized conser 93.9 0.4 8.6E-06 52.7 10.6 156 9-172 237-404 (461)
248 PF00854 PTR2: POT family; In 93.8 0.24 5.3E-06 52.5 8.7 103 419-534 3-118 (372)
249 PF12832 MFS_1_like: MFS_1 lik 93.7 0.16 3.5E-06 41.7 5.6 47 365-411 19-65 (77)
250 KOG0253 Synaptic vesicle trans 93.7 0.94 2E-05 48.3 12.4 148 370-538 101-250 (528)
251 PF05631 DUF791: Protein of un 93.7 0.54 1.2E-05 49.7 10.8 146 372-534 60-211 (354)
252 PRK03612 spermidine synthase; 92.5 2 4.3E-05 48.2 13.7 53 354-406 22-75 (521)
253 KOG2325 Predicted transporter/ 91.8 2 4.3E-05 47.5 12.4 162 367-538 55-228 (488)
254 PF05978 UNC-93: Ion channel r 90.9 2.7 5.9E-05 39.3 10.8 89 386-480 42-130 (156)
255 KOG2816 Predicted transporter 89.7 1.7 3.7E-05 47.9 9.7 124 391-537 72-197 (463)
256 PF03137 OATP: Organic Anion T 86.6 0.16 3.5E-06 57.0 -0.8 160 368-534 25-245 (539)
257 KOG3762 Predicted transporter 86.0 2 4.3E-05 47.9 7.2 180 341-540 366-548 (618)
258 COG0477 ProP Permeases of the 85.9 3.4 7.5E-05 39.8 8.3 109 37-164 26-139 (338)
259 PF05978 UNC-93: Ion channel r 85.8 3.1 6.6E-05 39.0 7.4 92 59-172 49-141 (156)
260 TIGR00926 2A1704 Peptide:H+ sy 84.8 5.5 0.00012 46.0 10.4 61 37-110 12-73 (654)
261 PF01733 Nucleoside_tran: Nucl 82.1 0.4 8.6E-06 49.8 -0.3 19 386-404 187-205 (309)
262 KOG2563 Permease of the major 81.5 28 0.00062 38.2 13.4 104 379-488 77-189 (480)
263 KOG4686 Predicted sugar transp 80.6 2 4.4E-05 44.4 4.1 150 347-504 42-200 (459)
264 KOG1237 H+/oligopeptide sympor 75.2 9.9 0.00021 43.2 8.2 152 367-536 58-242 (571)
265 KOG3626 Organic anion transpor 73.1 8.7 0.00019 44.6 7.1 158 374-537 125-341 (735)
266 PF12832 MFS_1_like: MFS_1 lik 71.0 9 0.00019 31.3 4.9 39 37-75 24-63 (77)
267 TIGR00769 AAA ADP/ATP carrier 68.3 80 0.0017 35.1 13.1 41 460-501 150-190 (472)
268 KOG3762 Predicted transporter 67.0 6.4 0.00014 44.1 4.1 46 367-412 32-77 (618)
269 COG4262 Predicted spermidine s 65.6 2E+02 0.0043 31.0 14.3 111 349-465 10-131 (508)
270 PF06779 DUF1228: Protein of u 65.5 22 0.00048 29.8 6.2 65 30-108 9-74 (85)
271 KOG0637 Sucrose transporter an 63.3 18 0.00039 39.8 6.6 123 366-489 52-193 (498)
272 PF06779 DUF1228: Protein of u 58.7 29 0.00064 29.1 5.8 47 362-408 8-54 (85)
273 KOG3810 Micronutrient transpor 52.5 1.5E+02 0.0033 31.8 11.0 183 338-534 226-416 (433)
274 PF10225 DUF2215: Uncharacteri 50.5 1.1E+02 0.0025 30.8 9.6 56 123-179 34-89 (249)
275 PF03547 Mem_trans: Membrane t 48.8 57 0.0012 34.6 7.6 23 338-360 237-259 (385)
276 PF06963 FPN1: Ferroportin1 (F 41.6 5.1E+02 0.011 28.4 19.8 71 339-410 252-322 (432)
277 PF13000 Acatn: Acetyl-coenzym 39.2 6.1E+02 0.013 28.6 15.1 69 338-411 270-339 (544)
278 PF11947 DUF3464: Protein of u 38.1 28 0.00061 32.5 2.8 37 444-480 107-144 (153)
279 KOG1479 Nucleoside transporter 36.3 5.2E+02 0.011 28.2 12.4 46 364-411 36-82 (406)
280 COG4603 ABC-type uncharacteriz 33.3 2.3E+02 0.0051 30.2 9.1 101 443-547 115-223 (356)
281 PLN02922 prenyltransferase 33.0 3.7E+02 0.0081 28.1 10.5 112 89-213 94-214 (315)
282 PF01770 Folate_carrier: Reduc 31.9 3.4E+02 0.0074 29.6 10.2 152 376-544 35-187 (412)
283 PF09925 DUF2157: Predicted me 30.8 4.1E+02 0.0089 24.1 9.9 97 90-196 33-131 (145)
284 PRK01610 putative voltage-gate 27.2 3.7E+02 0.008 29.2 9.7 103 435-553 314-417 (418)
285 PF07672 MFS_Mycoplasma: Mycop 24.4 7.8E+02 0.017 25.2 11.1 23 336-358 84-106 (267)
286 PF02487 CLN3: CLN3 protein; 24.1 6.4E+02 0.014 27.4 10.6 116 392-530 70-186 (402)
287 PRK01862 putative voltage-gate 23.4 5E+02 0.011 29.3 10.2 103 436-554 333-436 (574)
288 PF14012 DUF4229: Protein of u 22.9 2.2E+02 0.0048 22.8 5.2 36 521-556 33-68 (69)
289 PF04995 CcmD: Heme exporter p 22.6 1.5E+02 0.0032 21.7 3.8 6 542-547 29-34 (46)
290 TIGR00769 AAA ADP/ATP carrier 22.3 1.1E+03 0.024 26.2 19.2 57 16-75 9-72 (472)
291 PRK05277 chloride channel prot 21.3 7.8E+02 0.017 26.8 10.9 64 436-503 315-379 (438)
292 TIGR00939 2a57 Equilibrative N 21.0 9.5E+02 0.021 26.2 11.4 27 444-471 111-137 (437)
No 1
>PTZ00207 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-76 Score=654.41 Aligned_cols=510 Identities=16% Similarity=0.256 Sum_probs=427.4
Q ss_pred chhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCC
Q 008597 10 KSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 10 ~~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
.+||.++++++++++++|+.|.|++|++++++++|+||+|+++++..+...+.+.+++|+++||+|
T Consensus 24 ~~Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G-------------- 89 (591)
T PTZ00207 24 PRRFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLG-------------- 89 (591)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------
Confidence 689999999999999999999999999999999999999999887665555556778999999987
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhH
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGG 169 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa 169 (560)
||+++++|++++++|++++|+++++.+. .++|.++++.++.|+|+++.++++++++++|||++||+++|+.+++.|+|+
T Consensus 90 ~R~vllig~ll~~iG~ll~ala~~~~i~-~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGs 168 (591)
T PTZ00207 90 PRPIFVLSMTVFCLGTLLFALTFQEVIE-GSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGS 168 (591)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccccc-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888774 468899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCC---------Ccccc-----------------chhhh
Q 008597 170 AALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNS---------ADDKK-----------------HLNAF 223 (560)
Q Consensus 170 ~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~---------~~~~~-----------------~~~~~ 223 (560)
+++++++..++.+|.+.+++++++.+..+++++..++|.+|++. ++|++ +|..+
T Consensus 169 aI~~~l~~~l~~~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~ 248 (591)
T PTZ00207 169 AILGSIQLAFFSDNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYG 248 (591)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhH
Confidence 99999999999999999999999999999999999999998653 12222 34445
Q ss_pred hHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH-HHhhcc-cccccccccccccCCCCCcccCCCCCCCCCCCCcCC
Q 008597 224 SAVALTIAAYLMIIIILENIFTFPLWARIITFLFLL-FLLSSP-LGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTST 301 (560)
Q Consensus 224 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (560)
..+.+++++|+++.++++++++++++.+..++++++ ++++.| +.+|.+. .+.++.++ +.++ +. .+
T Consensus 249 ~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~--~~~~~~~~----~~~~-----~~--~~ 315 (591)
T PTZ00207 249 FVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTT--FDGKRPHD----DSDG-----KA--KE 315 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHH--hccCCcCC----Cccc-----cc--cc
Confidence 678888999999999999999999999999888777 777778 5555543 22111110 0000 00 00
Q ss_pred ccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCC-
Q 008597 302 KFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYP- 379 (560)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~- 379 (560)
+. +.+++. +.+ +++..+++.+... |+.++ |++|.+++.|||++|++++|+.|+|++++||++||++++ |++
T Consensus 316 ~~--~~~~~~--~~~-~~~~~~~~~~~~~-P~~~~-t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~ 388 (591)
T PTZ00207 316 HV--EAGEEV--SAA-EDKVVETDVDYIA-PQFQE-TFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAP 388 (591)
T ss_pred cc--cccccc--ccc-ccccccccccCCC-CCCcc-hHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCC
Confidence 00 000000 000 0000011111122 34444 999999999999999999999999999999999999999 873
Q ss_pred CcchhH-HHHHHHHhhhhhccccccchhhhhhhcC----CCchHHHHHHHHHHHHHHHHHhhcCc-chHHHHHHHHHhhh
Q 008597 380 TSAINS-LVSLWSIWNFLGRFGGGYVSDIVLHRMG----WERPSFIAITLATMSVGHIVVASGFP-GNLYVGSIIVGVCY 453 (560)
Q Consensus 380 ~~~aa~-lvSl~si~n~~GRl~~G~lsD~~~~~~~----~~R~~~l~~~~~l~~~~~lll~~~~~-~~l~~~~~l~G~~~ 453 (560)
+.+..+ +||++|++|++||+++|+++ .+.+|++ +||+..+.+... +.+++++++...| ..++++++++|+||
T Consensus 389 ~~~~~~~~vsL~si~~~~GRl~~g~~~-~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~ 466 (591)
T PTZ00207 389 DDALNTLLTVLNGVGSAVGRLCMSYFE-IWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFAN 466 (591)
T ss_pred CccceeeehhhhhHHHHhhHHHHHHHH-HHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHh
Confidence 332234 89999999999999999998 6666665 899998888877 7888877776667 78999999999999
Q ss_pred hccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCC-CCcccCccccHHHHHHHHHHHHHHH
Q 008597 454 GCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE-GNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 454 G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~-~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
|.+|++.|++++|+|| ||+|++|+++.++.++|++++|..++|++||++++|+ +.+|.|++||+.+|++++++|++++
T Consensus 467 G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~ 545 (591)
T PTZ00207 467 GFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAF 545 (591)
T ss_pred hHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999999999999999999999999876 5599999999999999999999999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhcCC
Q 008597 533 LVAFLLFIRTRRFYKQVVLRRLGHS 557 (560)
Q Consensus 533 vl~l~l~~r~r~~~~~~~~~~~~~~ 557 (560)
++++++++|+||+|++.++||+|..
T Consensus 546 ~~s~~l~~R~r~~y~~~~~~~~~~~ 570 (591)
T PTZ00207 546 ITSTYVHLQYRRLCLKALEERRRIR 570 (591)
T ss_pred HHHhheeeehHHHHHHHHHHHHHHH
Confidence 9999999999999999999998753
No 2
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=100.00 E-value=1.7e-51 Score=410.98 Aligned_cols=244 Identities=48% Similarity=0.801 Sum_probs=234.5
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCcH
Q 008597 12 KWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPW 91 (560)
Q Consensus 12 rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~ 91 (560)
||+++++++++|+++|++|.||+||++||+++|+||+|+|++++++|+|.++|+++|+++|++| ||
T Consensus 1 rW~~l~a~~~v~~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G~~~G~l~d~~g--------------p~ 66 (250)
T PF06813_consen 1 RWLSLVASIWVQLCSGTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFGILAGLLYDRFG--------------PW 66 (250)
T ss_pred ChhhHHHHHHHHHhcCcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhccHHHHHHHHhcc--------------hH
Confidence 8999999999999999999999999999999999999999999999999999999999999987 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHH
Q 008597 92 VVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAA 171 (560)
Q Consensus 92 ~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i 171 (560)
.++++|+++.++||+++|+++++.++++++|++|++.+++|+|++++||++++|++||||++||+|+|++|+++|||++|
T Consensus 67 ~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai 146 (250)
T PF06813_consen 67 VVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAI 146 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHH
Confidence 99999999999999999999999998788999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCC-----CccccchhhhhHHHHHHHHHHHHHHHHhccccc
Q 008597 172 LIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNS-----ADDKKHLNAFSAVALTIAAYLMIIIILENIFTF 246 (560)
Q Consensus 172 ~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 246 (560)
++++++++|++|++.|++|+++.|..+++++++++|++|+++ ++|+++|..+..+.+++++|+++.+++++..++
T Consensus 147 ~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr~~~~~~~~~~~~~~~~~F~~~~~i~l~la~yLl~~~i~~~~~~~ 226 (250)
T PF06813_consen 147 FTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVRPVPPSPSRTRQPSESKRFLFFFAIALALAIYLLVISILQNFVKL 226 (250)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhheeccCCccccccCcchhHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 999999999999999999999999999999999999998632 566777888888999999999999999999999
Q ss_pred chhHHHHHHHHHHHHhhcccccc
Q 008597 247 PLWARIITFLFLLFLLSSPLGIA 269 (560)
Q Consensus 247 ~~~~~~~~~~~~~~ll~~p~~~~ 269 (560)
++..++..++++++++.+|+.++
T Consensus 227 s~~~~~~~~~il~llL~~Pl~i~ 249 (250)
T PF06813_consen 227 SRAARVIFAVILLLLLLLPLAIP 249 (250)
T ss_pred CHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999865
No 3
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=306.98 Aligned_cols=427 Identities=16% Similarity=0.166 Sum_probs=308.2
Q ss_pred hHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhh-hhhhHHHHHhhccccccccccccccCC
Q 008597 12 KWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGAN-VGVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 12 rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~-~~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
.|.+++++++++ .+-|..++|+++-+.+++.++-+.+|++.++....-..+ .|++.+.++||+|
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg-------------- 109 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG-------------- 109 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC--------------
Confidence 489999998888 899999999999999999999999998855544433333 3889999999986
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhH
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGG 169 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa 169 (560)
.|.+.++|+++.++|+.+ +.+..+. +.++..|+++.|+|.++.|.++++...+||+|||++|+|+..++.|+|.
T Consensus 110 ~R~v~i~G~~v~~~g~~l-----ssF~~~i-~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~ 183 (509)
T KOG2504|consen 110 CRTVMIAGGLVAALGLLL-----SSFATSL-WQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGT 183 (509)
T ss_pred chHHHHHHHHHHHHHHHH-----HHHHhhH-HHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcce
Confidence 999999999999999999 4444431 3467779999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC--chhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccc
Q 008597 170 AALIQAYDTIWKGR--PSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFP 247 (560)
Q Consensus 170 ~i~s~i~~~~f~~~--~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 247 (560)
.+++.+.+.+++.- ...++.+..+. ..++.+....|+.+.+...+ + ....+.
T Consensus 184 ~~~~~l~~~l~~~~G~r~~~l~~~~~~--l~~~~~~~~~rp~~~~~~~~-~----------------------~~~~~~- 237 (509)
T KOG2504|consen 184 VVFPPLLKYLLSKYGWRGALLIFGGIS--LNVLVAGALLRPLSPPKKPN-E----------------------EKDLRN- 237 (509)
T ss_pred eeHHHHHHHHHHHhCcHHHHHHHHHHH--HHHHHHHHHcCCCCcCCCch-h----------------------hhhhcc-
Confidence 99999998887542 22222222222 44444444454433321000 0 000000
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccc
Q 008597 248 LWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFD 327 (560)
Q Consensus 248 ~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (560)
+ ..+.+ +. ..+...+.++. +..... ...+..++. ++.+...
T Consensus 238 -----------------~--------~~~~~----~~---~~~~~~~~~~~-----~~~~~~-~~~~~~~~~-~~~~~~~ 278 (509)
T KOG2504|consen 238 -----------------S--------AASVE----ST---PKPVELRISER-----DSGLKK-LSLSNLATL-KRGPDKW 278 (509)
T ss_pred -----------------c--------ccccc----cc---ccccccccccC-----CCCCCc-ccccchhhh-hhCCccc
Confidence 0 00000 00 00000000000 000000 000000000 0000000
Q ss_pred cccccccc-cCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchh
Q 008597 328 DKKLKDEE-DMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSD 406 (560)
Q Consensus 328 ~~~~~~~~-~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD 406 (560)
+..+.+.. +.--++++|++.|+.+.+...+...........+++++++.|+++.+++.++|++++.|.+||++.|+++|
T Consensus 279 ~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD 358 (509)
T KOG2504|consen 279 RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLAD 358 (509)
T ss_pred cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcC
Confidence 00011110 01126899999999999999999888888889999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhh
Q 008597 407 IVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASP 485 (560)
Q Consensus 407 ~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~ 485 (560)
+.. .++.+...++++..+++.+..+ ..+...+...++++|++.|...++.+.++.|+.|.++++..||++.+...
T Consensus 359 ~~~----~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~g 434 (509)
T KOG2504|consen 359 KPG----IRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQG 434 (509)
T ss_pred ccc----cchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhH
Confidence 985 2345666666666666665444 45556788899999999999999999999999999999999999999999
Q ss_pred hHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 486 VGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 486 ~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
++. +.+||++|++||.+++ |..+|+.++...+++.++++.+.
T Consensus 435 i~~-l~gpPiag~~~d~tg~-----------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 435 IGA-LVGPPIAGLLYDITGN-----------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHH-HcCcccceeeeeccCC-----------eeeehhhcChHHHHHHHHHHHhH
Confidence 999 4899999999999985 99999999999999998777666
No 4
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.96 E-value=1.3e-27 Score=248.45 Aligned_cols=371 Identities=21% Similarity=0.255 Sum_probs=269.5
Q ss_pred hhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCC
Q 008597 11 SKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
+||..++..+....+.|..|+|+.+.|.+++++|+|.+|++.+..+..++..+ .++.|.+.||+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G-------------- 66 (377)
T TIGR00890 1 RWWYVLVGTVIMCFTSGYVYTWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFG-------------- 66 (377)
T ss_pred CeEEEeHHHHHHHHHhhHHhhhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcC--------------
Confidence 46888888999999999999999999999999999999999888888888876 788999999987
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhH
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGG 169 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa 169 (560)
+|.++.++.++..+|..+...+ + +++.+...-++.|.|.+..+.++.....+|||++||.+.|+...+.++|+
T Consensus 67 ~r~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 139 (377)
T TIGR00890 67 PRAVAMLGGILYGLGFTFYAIA-----D--SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGS 139 (377)
T ss_pred ccchhHHhHHHHHHHHHHHHHH-----H--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhH
Confidence 8889999999999998774322 2 34555555568899999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchh
Q 008597 170 AALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLW 249 (560)
Q Consensus 170 ~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 249 (560)
.+..++...+.+.. +....
T Consensus 140 ~~~~~~~~~~~~~~-------------------------------------------------------------~~~~~ 158 (377)
T TIGR00890 140 FILSPLITSVINLE-------------------------------------------------------------GVPAA 158 (377)
T ss_pred hHHHHHHHHHHhcc-------------------------------------------------------------cHHHH
Confidence 88765554332110 00000
Q ss_pred HHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccc
Q 008597 250 ARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDK 329 (560)
Q Consensus 250 ~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (560)
+.+.....++ ...+.....+ + +++++. ++++ +
T Consensus 159 f~~~~~~~~~--~~~~~~~~~~----~------------------~~~~~~-------~~~~------~----------- 190 (377)
T TIGR00890 159 FIYMGIIFLL--VIVLGAFLIG----Y------------------PPGQLI-------KTNI------E----------- 190 (377)
T ss_pred HHHHHHHHHH--HHHHHHHhee----c------------------Cchhcc-------ccCc------c-----------
Confidence 0000000000 0000000010 0 000000 0000 0
Q ss_pred cccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhh
Q 008597 330 KLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 409 (560)
Q Consensus 330 ~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~ 409 (560)
...++.+.++.+|++++|.+...+++.........+..+++.+++|.++.+++.+.++.++.+.+|++.+|+++||++
T Consensus 191 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 268 (377)
T TIGR00890 191 --VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIG 268 (377)
T ss_pred --cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000123457889999999998888777666666667778888889988877888899999999999999999999996
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHHhh-cCc--chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhh
Q 008597 410 HRMGWERPSFIAITLATMSVGHIVVAS-GFP--GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV 486 (560)
Q Consensus 410 ~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~--~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~ 486 (560)
+|+ .+.+...+.+++.++... +.. ..+....++.|+++|..++..|.++.|.++.++.++.+|+......+
T Consensus 269 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 342 (377)
T TIGR00890 269 RQK------TMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV 342 (377)
T ss_pred hhh------hhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH
Confidence 432 334444555555544332 211 12334567789999999999999999999999999999999888888
Q ss_pred HHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 487 GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
|. .+++.+.|.+.|..| |+..|.+.++++++++
T Consensus 343 g~-~~~~~~~g~l~~~~g------------~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 343 AG-IFGGLIASHALTEIG------------FEYTFIVTGAFALTSL 375 (377)
T ss_pred HH-HHHHHHHHHHHhhhc------------hhhHHHHHHHHHHHhc
Confidence 88 488899999999876 9999999888777665
No 5
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.94 E-value=1.5e-25 Score=244.06 Aligned_cols=398 Identities=13% Similarity=0.096 Sum_probs=260.4
Q ss_pred hchhHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccc
Q 008597 9 LKSKWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSF 86 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~ 86 (560)
...||.+++++++.+ ...+..+.++++-+++++.+|+|+++...+.....++..+ +++.|.+.||+|
T Consensus 14 ~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g----------- 82 (455)
T TIGR00892 14 GGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFG----------- 82 (455)
T ss_pred CCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcC-----------
Confidence 345798888888776 3456678899999999999999999999766666555554 788999999987
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHH-HHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhh
Q 008597 87 LRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMC-LFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFL 165 (560)
Q Consensus 87 ~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~-~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~ 165 (560)
+|.+++++.++..++..+. +..++ ++.+. ...++.|.+.+.....+.....+|||++||.+.|+..++.
T Consensus 83 ---~r~~l~~~~~~~~~~~~~~-----~~~~~--~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~r~~a~g~~~~~~ 152 (455)
T TIGR00892 83 ---CRPVVIAGGLLASLGMILA-----SFSSN--VIELYLTAGFITGLGLAFNFQPSLTMLGKYFYRRRPLANGLAMAGS 152 (455)
T ss_pred ---chHHHHhhHHHHHHHHHHH-----HHhhh--HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHhhHHHHHHHHHhcc
Confidence 7888999988888887763 22222 33333 3456778888877677777778999999999999999999
Q ss_pred hhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccc
Q 008597 166 GLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFT 245 (560)
Q Consensus 166 GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 245 (560)
++++.+...+...+.+ ..+
T Consensus 153 ~~g~~~~~~l~~~l~~-------------------------------------------------------------~~g 171 (455)
T TIGR00892 153 PVFLSTLAPLNQYLFE-------------------------------------------------------------SFG 171 (455)
T ss_pred cHHHHHHHHHHHHHHH-------------------------------------------------------------HhC
Confidence 9998877544332211 011
Q ss_pred cchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccc
Q 008597 246 FPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAE 325 (560)
Q Consensus 246 ~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (560)
....+.+...+.++.++..-+....+ ..++..+ +++ + + ..+++.. .++.+.
T Consensus 172 wr~~f~~~~~~~~~~~v~~~~~~~~~----~~~~~~~------------~~~-~-~----~~~~~~~----~~~~~~--- 222 (455)
T TIGR00892 172 WRGSFLILGGLLLHCCVCGALMRPVG----PSQRVSK------------SKS-K-E----GLPPDGS----TKKLSK--- 222 (455)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCC----ccccccc------------ccc-c-c----cCCCCCc----cccccc---
Confidence 11111111111111000000000000 0000000 000 0 0 0000000 000000
Q ss_pred cccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccch
Q 008597 326 FDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVS 405 (560)
Q Consensus 326 ~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~ls 405 (560)
+.. ..+..+.-..+.+|+++||.+....++......+....++++.++.|+++.+++.+.++.++.+.++|++.|+++
T Consensus 223 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~ 300 (455)
T TIGR00892 223 -KST-AEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIA 300 (455)
T ss_pred -cch-hhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000 000011112468899999998887766655555666788899999999999999999999999999999999999
Q ss_pred hhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhh
Q 008597 406 DIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIAS 484 (560)
Q Consensus 406 D~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~ 484 (560)
||...+. .|...+.....+.+++.++.. .++...+++..++.|+++|......+.++.|.++.++.++.+|+..+..
T Consensus 301 d~~~~~~--~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 378 (455)
T TIGR00892 301 GLKWIRP--HVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVE 378 (455)
T ss_pred cccccCH--HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHH
Confidence 9732111 122223223333333333332 3444556777889999999999999999999999999999999999888
Q ss_pred hhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 485 PVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 485 ~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
.+|.. ++|.++|.++|..++ |+..|.+.+++++++.+
T Consensus 379 ~lg~~-igp~i~G~l~~~~g~-----------~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 379 CCAVL-IGPPLAGRLVDATKN-----------YKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHH-ccccceeeeehhcCC-----------cchHHHHhhHHHHHHHH
Confidence 88884 899999999998754 99999999888777665
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.94 E-value=1.2e-24 Score=237.35 Aligned_cols=421 Identities=14% Similarity=0.010 Sum_probs=254.7
Q ss_pred hhhhhhhchhHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccc
Q 008597 3 SERRLNLKSKWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHH 80 (560)
Q Consensus 3 ~~~~~~~~~rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~ 80 (560)
.+|+...+++|.++....+.- +.--..+.+++-.+++++++|+|.+|...+..+..++..+ .++.|.+.||+|
T Consensus 18 ~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g----- 92 (467)
T PRK09556 18 VQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKN----- 92 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccC-----
Confidence 444455555665555444443 2233466788888999999999999999888888888766 788999999986
Q ss_pred cccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceee
Q 008597 81 RTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVG 159 (560)
Q Consensus 81 ~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~G 159 (560)
+|+++.++.+..+++.+++.....+.. .+++.++..-++.|.+++....++.+...+|||+ +||.+.|
T Consensus 93 ---------~r~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~g 161 (467)
T PRK09556 93 ---------TKQFLPFLLILSAICMLGFGASLGSGS--VSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLG 161 (467)
T ss_pred ---------ccchHHHHHHHHHHHHHHHHHHHhccc--chHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEE
Confidence 888888888887777766544333332 3466777777888999998888888989999985 7999999
Q ss_pred ehhhhhhhhHHHHHHHHHHh----cCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHH
Q 008597 160 IMKGFLGLGGAALIQAYDTI----WKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLM 235 (560)
Q Consensus 160 i~~~~~GLsa~i~s~i~~~~----f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 235 (560)
+..++.++|+++-..+.... +.++....+.+.++..
T Consensus 162 i~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~---------------------------------------- 201 (467)
T PRK09556 162 FWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIA---------------------------------------- 201 (467)
T ss_pred eeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHH----------------------------------------
Confidence 99999999988865332111 0000001000000000
Q ss_pred HHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCC
Q 008597 236 IIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHEL 315 (560)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (560)
+++ +.+.....+ +..+. ....+ +++.. ++..++++
T Consensus 202 ----------------------~~~--~i~~~~~~~----~~p~~--------~~~~~-~~~~~-----~~~~~~~~--- 236 (467)
T PRK09556 202 ----------------------LII--GFIGLRYGS----DSPEE--------LGWGK-AEEIF-----GEPISEED--- 236 (467)
T ss_pred ----------------------HHH--HHHHHHhCC----CChhh--------cCCCC-hhhcc-----cCccchhh---
Confidence 000 000000010 00000 00000 00000 00000000
Q ss_pred CCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhh
Q 008597 316 PGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWN 394 (560)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n 394 (560)
.++ ++++....+.-.++.+|++.+|.+++..++.........+++|.+.+ .+|++..+++...++..+++
T Consensus 237 -~~~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~ 307 (467)
T PRK09556 237 -KET--------ESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGA 307 (467)
T ss_pred -hcc--------ccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHH
Confidence 000 00000000111234899999999999888876665566677888875 47999888888999999999
Q ss_pred hhhccccccchhhhhhhcCCCchHHHHH-HHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCc
Q 008597 395 FLGRFGGGYVSDIVLHRMGWERPSFIAI-TLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH 472 (560)
Q Consensus 395 ~~GRl~~G~lsD~~~~~~~~~R~~~l~~-~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~ 472 (560)
.+|++++|+++||+++|+ ..... .........+++.. +++...++..+++|++..+........+.|.+..++
T Consensus 308 ~ig~~~~G~lsDr~g~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~ 382 (467)
T PRK09556 308 LVGSLLWGWLSDLANGRR-----ALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA 382 (467)
T ss_pred HHHHHHHHHHHHHHCCCc-----hHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh
Confidence 999999999999997543 22211 11111111122222 222334455666675332222233456779999999
Q ss_pred hhhhhhHHHhhhhh-HHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 473 MGTIFNTIAIASPV-GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 473 ~g~~yG~~~~a~~~-g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
.|+..|++.....+ |. .++|.+.|++.|.+.+.+...=+...-|+..|.++.+++++++++.+.+.
T Consensus 383 ~g~a~gi~~~~g~l~g~-~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 383 IGVANGIKGTFAYLFGD-SFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHHHHHHHhH-HHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999776554 55 47889999999932100000000012399999999999999887777665
No 7
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.93 E-value=2.5e-24 Score=233.86 Aligned_cols=416 Identities=15% Similarity=0.139 Sum_probs=254.0
Q ss_pred chhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccccc
Q 008597 10 KSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFL 87 (560)
Q Consensus 10 ~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~ 87 (560)
+.+|.++.+..+...+... .+.++...|.++++ |+|+++...+.....++..+ .++.|.+.||+|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g------------ 91 (452)
T PRK11273 25 RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN------------ 91 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccC------------
Confidence 3457765555554433322 24577788999988 99999999777777777765 788999999986
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhh
Q 008597 88 RGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLG 166 (560)
Q Consensus 88 ~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~G 166 (560)
+|.++.++.++..++.+.+...-.. ..+++.+....++.|.+++..+.+......+|||+ +||.+.|+...+.+
T Consensus 92 --~k~~l~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 166 (452)
T PRK11273 92 --PRVFLPAGLILAAAVMLFMGFVPWA---TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHN 166 (452)
T ss_pred --CchhHHHHHHHHHHHHHHHHhhhcc---cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 8889999999888888775433111 12345555556777888888887777788899975 69999999888888
Q ss_pred hhHHHHHHHHHHhc--CCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhccc
Q 008597 167 LGGAALIQAYDTIW--KGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIF 244 (560)
Q Consensus 167 Lsa~i~s~i~~~~f--~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 244 (560)
+++.+..++..... ..+..
T Consensus 167 ~g~~~~~~l~~~~~~~~~gw~----------------------------------------------------------- 187 (452)
T PRK11273 167 VGGGLPPLLFLLGMAWFNDWH----------------------------------------------------------- 187 (452)
T ss_pred hhhhHHHHHHHHHHHHhccHH-----------------------------------------------------------
Confidence 88776654322110 00000
Q ss_pred ccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccc
Q 008597 245 TFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKA 324 (560)
Q Consensus 245 ~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (560)
..+.+...+.++..+...+. .+.+.++ ....++ ++ ...+. ++++ +++
T Consensus 188 ---~~f~i~~~~~~~~~~l~~~~--~~~~~~~------------~~~~~~-~~-----~~~~~-~~~~----~~~----- 234 (452)
T PRK11273 188 ---AALYMPAFAAILVALFAFAM--MRDTPQS------------CGLPPI-EE-----YKNDY-PDDY----NEK----- 234 (452)
T ss_pred ---HHHHHHHHHHHHHHHHHHHH--ccCCHhh------------cCCCCh-hh-----hhhcc-cccc----ccc-----
Confidence 00000000000100000000 1100000 000000 00 00000 0000 000
Q ss_pred ccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhcccccc
Q 008597 325 EFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGY 403 (560)
Q Consensus 325 ~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~ 403 (560)
. +++. ..++.-.+..+|++.+|.+++..++....-....+..|.+.++ .|++..+++...+++++++.+|+++.|+
T Consensus 235 ~-~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~ 311 (452)
T PRK11273 235 H-EQEL--TAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGW 311 (452)
T ss_pred c-CCCc--cHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0011112347899999999888777665555667788998876 5888888888888999999999999999
Q ss_pred chhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH
Q 008597 404 VSDIVLHRMGWERPSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI 480 (560)
Q Consensus 404 lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~ 480 (560)
++||+.+++ |.........+..++.+++.. +++...++...++|....+........+.|.+..++.|+..|+.
T Consensus 312 l~dr~~~~r---~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 388 (452)
T PRK11273 312 MSDKVFRGN---RGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFT 388 (452)
T ss_pred HHHHHccCC---cchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHH
Confidence 999996432 111222222222333322211 12222334445555544333333445678999999999999999
Q ss_pred HhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHh
Q 008597 481 AIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRR 553 (560)
Q Consensus 481 ~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~~ 553 (560)
.....+|+.+.+|.+.|+++|+.| |+.+|.+++++++++++..+++..-+||..||.+++|
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKRHHEELLQKR 449 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhc------------chHHHHHHHHHHHHHHHHHHHHhccccchHHHHHhhh
Confidence 776666655567889999999876 9999999999999999888877766777677776655
No 8
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.92 E-value=4.2e-23 Score=223.02 Aligned_cols=396 Identities=12% Similarity=0.029 Sum_probs=239.8
Q ss_pred hHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCC
Q 008597 12 KWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 12 rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
||.++...++.. +.....+.++.+.+++++++|+|.+|...+.....++..+ .++.|++.||+|
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g-------------- 86 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSN-------------- 86 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcC--------------
Confidence 444443433333 2223456778889999999999999999888777787765 788999999986
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhh
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLG 168 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLs 168 (560)
+|.++.++.++.+++..++.. .+ +++.++..-++.|.+.+..+.+......+|||+ +||++.|+...+.++|
T Consensus 87 ~r~~~~~~~~~~~~~~~~~~~-----~~--~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 87 ARYFMGIGLIATGIINILFGF-----SS--SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVG 159 (434)
T ss_pred CchhHHHHHHHHHHHHHHHHH-----Hh--HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 888999999999888876432 22 355566656677888888888888888999985 6999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccch
Q 008597 169 GAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL 248 (560)
Q Consensus 169 a~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 248 (560)
+.+-..+...+.+ ..+...
T Consensus 160 ~~~~~~~~~~l~~-------------------------------------------------------------~~gw~~ 178 (434)
T PRK11663 160 GALIPLVVGAIAL-------------------------------------------------------------HYGWRY 178 (434)
T ss_pred HHHHHHHHHHHHH-------------------------------------------------------------cccHHH
Confidence 9887644443321 011111
Q ss_pred hHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccc
Q 008597 249 WARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDD 328 (560)
Q Consensus 249 ~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (560)
.+.+...+.++..+. .....+. .+.+. ..++..+.++ +.++. .++ . ++
T Consensus 179 ~f~~~~i~~~~~~~~--~~~~~~~--~p~~~-------------~~~~~~~~~~---~~~~~------~~~----~--~~ 226 (434)
T PRK11663 179 GMMIAGIIAIVVGLF--LCWRLRD--KPQAM-------------GLPSVGEWRH---DALEL------AQQ----Q--EG 226 (434)
T ss_pred HHHHHHHHHHHHHHH--HHHHcCC--CHhhc-------------CCCCcccccc---ccccc------chh----c--cc
Confidence 111111110000000 0000110 00000 0000000000 00000 000 0 00
Q ss_pred ccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhh
Q 008597 329 KKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI 407 (560)
Q Consensus 329 ~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~ 407 (560)
+ ..+.++.-....+|++.+|.+.+.+++.......+.++++++.+ ++|++..+++...+++.+++.+||+++|+++||
T Consensus 227 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr 305 (434)
T PRK11663 227 A-GLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDK 305 (434)
T ss_pred c-CCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 0 00001110123678999999988776655544455567788874 569998888999999999999999999999999
Q ss_pred hhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhH
Q 008597 408 VLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVG 487 (560)
Q Consensus 408 ~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g 487 (560)
+.+++.........+...+..+..++........+.+..+++|+...+........++|.++.++.|+..|+.+....+|
T Consensus 306 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 385 (434)
T PRK11663 306 LFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG 385 (434)
T ss_pred hccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHH
Confidence 85432101111111111222222222222221122222333444322223344567789999999999999998888888
Q ss_pred HhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 488 SYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 488 ~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
. .++|++.|++.|+.| |+.+|++.+++++++++..
T Consensus 386 ~-~~~p~~~g~l~~~~g------------~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 386 A-ALSGYPLAKVLEIWH------------WTGFFVVISIAAGISALLL 420 (434)
T ss_pred H-HHhcccHHHHHHhcc------------cHHHHHHHHHHHHHHHHHH
Confidence 8 488999999999876 9999999998887776544
No 9
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.91 E-value=4.4e-23 Score=225.94 Aligned_cols=389 Identities=17% Similarity=0.193 Sum_probs=231.9
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcH
Q 008597 13 WIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPW 91 (560)
Q Consensus 13 w~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~ 91 (560)
|.............-..|.++.+.+.+++++|+|.+|.+.+.....++..+ .++.|++.||+| +|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G--------------~r 101 (476)
T PLN00028 36 RAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYG--------------PR 101 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------Ch
Confidence 344444333334444568899899999999999999999887777777776 588999999987 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHH
Q 008597 92 VVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGA 170 (560)
Q Consensus 92 ~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~ 170 (560)
.++.++.+...++..+. +...+ ++.+.+..++.|.+.+. +..+.....+||| ++||+++|+..+...+|+.
T Consensus 102 ~~~~~~~~~~~~~~~~~-----~~~~s--~~~l~~~r~l~G~~~~~-~~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~ 173 (476)
T PLN00028 102 YGSAFLLMLTAPAVFCM-----SLVSS--ATGFIAVRFFIGFSLAT-FVSCQYWMSTMFNGKIVGTANGIAAGWGNLGGG 173 (476)
T ss_pred HHHHHHHHHHHHHHHHH-----HHhcC--HHHHHHHHHHHHHHHHh-hHHHHHHHHHhcChhheeHHHHHHHHHHHHHHH
Confidence 88999888888887763 22222 34444445666776654 3344445678897 5799999998766666665
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhH
Q 008597 171 ALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWA 250 (560)
Q Consensus 171 i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 250 (560)
+-..+...+ ...+. .. ... +. ...+ ..+
T Consensus 174 ~~~~~~~~i------------------~~~~~----~~-~~~---~~---~gWr-----------------------~~f 201 (476)
T PLN00028 174 VTQLLMPLV------------------FPLIK----DA-GAP---SF---TAWR-----------------------IAF 201 (476)
T ss_pred HHHHHHHHH------------------HHHHH----hc-CCc---ch---hhhH-----------------------HHH
Confidence 543222111 10000 00 000 00 0000 001
Q ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccccc
Q 008597 251 RIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKK 330 (560)
Q Consensus 251 ~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (560)
.+.+.+.++..+.. .. .+ ++ .|+.... +.+.+ .+. +
T Consensus 202 ~i~g~l~l~~~l~~--~~-~~---~~-----------------~p~~~~~--------~~~~~---~~~---------~- 237 (476)
T PLN00028 202 FVPGLLHIIMGILV--LT-LG---QD-----------------LPDGNYR--------ELKKS---GTM---------P- 237 (476)
T ss_pred HHHHHHHHHHHHHH--HH-Hc---Cc-----------------CCCCchh--------hHHhc---Ccc---------c-
Confidence 11111100100000 00 00 00 0000000 00000 000 0
Q ss_pred ccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhh
Q 008597 331 LKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 409 (560)
Q Consensus 331 ~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~ 409 (560)
+......+++.++++.+|++++.+++..+....+.+.++++.++ .|++..+++.+.+++++++.+||+++|+++||++
T Consensus 238 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~ 316 (476)
T PLN00028 238 -KDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAA 316 (476)
T ss_pred -cccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 00001235788999999999988877766666667778888654 5999888899999999999999999999999999
Q ss_pred hhcCC-CchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHHH----hhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 410 HRMGW-ERPSFIAITLATMSVGHIVVAS-GFPGNLYVGSIIVG----VCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 410 ~~~~~-~R~~~l~~~~~l~~~~~lll~~-~~~~~l~~~~~l~G----~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
+|++. .|.+.+.+.+.+.++..+++.. ++.....+..++.+ .+.|..++..|. ++.++.|+++|++..+
T Consensus 317 ~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~g~~~~~ 391 (476)
T PLN00028 317 RRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF-----VSRRSLGVISGLTGAG 391 (476)
T ss_pred HhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc-----cChhhchhhhhhhhcc
Confidence 87643 3445544444444444333332 22222222333333 355666665553 3568999999999777
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
..+|+. +.+.++|.++ ...|+.+|++++++.+++.++.++++
T Consensus 392 g~lg~~-----i~~~l~~~~~---------~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 392 GNVGAV-----LTQLLFFTGS---------SYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred ccHHHH-----HHHHHHHhcC---------CccHhhHHHHHHHHHHHHHHHHHhee
Confidence 666764 3445555332 23499999999999999988777765
No 10
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.91 E-value=2.4e-22 Score=214.36 Aligned_cols=353 Identities=10% Similarity=0.020 Sum_probs=241.1
Q ss_pred ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHH
Q 008597 29 TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFL 107 (560)
Q Consensus 29 ~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~ 107 (560)
.++++...|++++++|+|.+|...+.....++..+ .++.|++.||+| +|.++.+|.+++.+|..+
T Consensus 25 ~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G--------------~r~~l~~~~~l~~~~~~~ 90 (393)
T PRK09705 25 LTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVS--------------ERRSVAISLLLIAVGALM 90 (393)
T ss_pred hhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhC--------------chHHHHHHHHHHHHHHHH
Confidence 37789999999999999999999887777777765 788999999986 999999999999999998
Q ss_pred HHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhH
Q 008597 108 MWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTY 187 (560)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~f 187 (560)
.+..++ ++.+.+.-++.|.|.+..+........+|||++||.+.|+..++..+|+.+-..+...+.+..
T Consensus 91 -----~~~a~~--~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~---- 159 (393)
T PRK09705 91 -----RELYPQ--SALLLSSALLGGVGIGIIQAVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS---- 159 (393)
T ss_pred -----HHHCcc--hHHHHHHHHHHHhHHHHHhhhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----
Confidence 444443 556677789999999998888777788899999999999988777666666543332211000
Q ss_pred HHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 188 LLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 188 ll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
.+. + ..+.......++.+ +..
T Consensus 160 --------------------------~~w-----~-------------------------~~~~~~~~~~~~~~---~~~ 180 (393)
T PRK09705 160 --------------------------ETW-----Y-------------------------QTLAWWALPAVVAL---FAW 180 (393)
T ss_pred --------------------------CCH-----H-------------------------HHHHHHHHHHHHHH---HHH
Confidence 000 0 00000000000000 000
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
... . + +++++ + + ++ + .+.++.+|+++
T Consensus 181 ~~~-----~-~--------------~~~~~-~---------~--------~~---------~-------~~~~~~l~~~~ 206 (393)
T PRK09705 181 WWQ-----S-A--------------REVAS-S---------H--------KT---------T-------TTPVRVVFTPR 206 (393)
T ss_pred HHH-----h-c--------------CCCcc-c---------c--------CC---------C-------cCCcccccCHh
Confidence 000 0 0 00000 0 0 00 0 01134567889
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
+|.+.+.+++.......+.++++++.+++|.+..+++.+.+++++++.+||+++|+++||+++| ..+.+.+.+.
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~------~~~~~~~~l~ 280 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR------KLLMLALVLQ 280 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch------HHHHHHHHHH
Confidence 9988877766655555677889999998999988899999999999999999999999998543 2333344444
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhcc-CCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 428 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 428 ~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG-~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
+++.+++. .+.. ...+...+.|++.|..+......+.+.++ .++.++.+|++.....++.. ++|.+.|++.|..|.
T Consensus 281 ~~~~~~~~~~~~~-~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~-~gp~~~G~l~~~~g~ 358 (393)
T PRK09705 281 LVGFCGFIWLPLQ-LPVLWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAG-LAPWFSGVLRSISGN 358 (393)
T ss_pred HHHHHHHHHccch-HHHHHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCC
Confidence 44544332 2211 11223456788888887777777778886 46789999998776666663 788999999999874
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
|+..|++.+.+++++.++.++.
T Consensus 359 -----------~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK09705 359 -----------YLMDWAFHALCVVGLMIITLRF 380 (393)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998888776655443
No 11
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.90 E-value=2.4e-22 Score=210.12 Aligned_cols=385 Identities=18% Similarity=0.151 Sum_probs=262.3
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
=.|++=+|+|+|++++|.+|+..++.+..+.-.+ =+..|.+.||.. ||..+.+|.++.++=-+++
T Consensus 46 knF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~n--------------pr~fm~~gLilsai~nil~ 111 (448)
T COG2271 46 KNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSN--------------PRYFMAFGLILSAIVNILF 111 (448)
T ss_pred HhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCC--------------CceeehHHHHHHHHHHHHH
Confidence 3689999999999999999999888777776655 467899988875 9988888877766666653
Q ss_pred HHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHH-HhcCCCchh
Q 008597 109 WASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYD-TIWKGRPST 186 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~-~~f~~~~~~ 186 (560)
|..+ +++++.++.++-|.=||++-.+|-.+..+|||+ +||+..++--..--+|+++...+.. +++.
T Consensus 112 -----Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~----- 179 (448)
T COG2271 112 -----GFSP--SLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFA----- 179 (448)
T ss_pred -----hhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHH-----
Confidence 5443 477788888888999999999999999999986 6999999999999999999976553 1110
Q ss_pred HHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccc
Q 008597 187 YLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPL 266 (560)
Q Consensus 187 fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~ 266 (560)
...+....+.+-+++.+++-+. .
T Consensus 180 -------------------------------------------------------~~~~w~~~f~~pgiiaiival~--~ 202 (448)
T COG2271 180 -------------------------------------------------------FHGGWRAAFYFPGIIAIIVALI--L 202 (448)
T ss_pred -------------------------------------------------------hccchhHHHHHHHHHHHHHHHH--H
Confidence 0001111111111111111111 0
Q ss_pred ccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHH-----
Q 008597 267 GIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQ----- 341 (560)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~----- 341 (560)
... .+++.|+ ++-| +.|+.. +|..+.+ ++ + +++++.|.+|
T Consensus 203 ~~~------~rd~Pqs----~GLP---~ie~~~-----~d~~e~~------~~---------~--~~~~~ls~~~i~~~Y 247 (448)
T COG2271 203 LFL------LRDRPQS----EGLP---PIEEYR-----GDPLEIY------EE---------E--KENEGLTAWQIFVKY 247 (448)
T ss_pred HHH------hCCCccc----cCCC---CHHHhh-----cCchhhh------hh---------h--ccCCCccHHHHHHHH
Confidence 000 1111000 0111 000000 0000000 00 0 0111144444
Q ss_pred HhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHH
Q 008597 342 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 420 (560)
Q Consensus 342 ~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l 420 (560)
.+|||-.|++.++.++.......+.++.|-+.. ..|++..+++..++++.++...|.+++||+|||+-+. |+...
T Consensus 248 VL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkg----rR~p~ 323 (448)
T COG2271 248 VLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKG----RRGPM 323 (448)
T ss_pred HHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccc----ccchH
Confidence 799999999999999999999987777777664 5699999999999999999999999999999999753 33433
Q ss_pred HH-HHHHHHHHHHHHhh---cCcchHHHHHHHHHh-hhhccccchhhHHHHhccCCchhhhhhHHHh-hhhhHHhhhhhh
Q 008597 421 AI-TLATMSVGHIVVAS---GFPGNLYVGSIIVGV-CYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSYVCSVR 494 (560)
Q Consensus 421 ~~-~~~l~~~~~lll~~---~~~~~l~~~~~l~G~-~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~-a~~~g~~ll~~~ 494 (560)
.+ .++...++...+.. +++....+....+|+ -||..+ +.-..+.|.--.|..|++-|+..+ ++.+|+ .++..
T Consensus 324 ~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqm-LiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga-~~a~~ 401 (448)
T COG2271 324 ALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQM-LIGLAAAEFVPKKAAGTATGFVGLFAYLIGA-ALAGL 401 (448)
T ss_pred HHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHH-HHHHHHhccccHhhccchhchhhhHHHHhhH-HhcCC
Confidence 33 22333333333322 223445556677787 788884 555557788888889999999966 555577 47777
Q ss_pred hhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 008597 495 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVV 550 (560)
Q Consensus 495 l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~ 550 (560)
..|++.|..| +...|++..+.++++.++.+.+..++++.++++.
T Consensus 402 ~~g~i~d~~g------------W~g~Fi~~~~~a~l~~lll~~~~~~~~~~~~~~~ 445 (448)
T COG2271 402 PLGYIADTWG------------WDGGFIVLSIAALLAILLLLPVWNAEERKIRDEK 445 (448)
T ss_pred cceeeEecCC------------CcchHHHHHHHHHHHHHHHHHHHhhcchhhhhhh
Confidence 8899999876 8999999999999999888888877777777553
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=4.8e-22 Score=211.53 Aligned_cols=383 Identities=12% Similarity=0.026 Sum_probs=253.9
Q ss_pred hhchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccc
Q 008597 8 NLKSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFS 85 (560)
Q Consensus 8 ~~~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~ 85 (560)
..+.+|.++..+.++..+.+. .+.+++..+.+++++|+|.+|.+.+.....++..+ .++.|.+.||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g---------- 78 (406)
T PRK11551 9 SSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIG---------- 78 (406)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 356889998888888866654 77889999999999999999999888888888776 688999999987
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhh
Q 008597 86 FLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGF 164 (560)
Q Consensus 86 ~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~ 164 (560)
+|+++.++.++..++.++... .. +++.+...-++.|.+.+..+.+......++|| ++||.+.|+...+
T Consensus 79 ----~r~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 147 (406)
T PRK11551 79 ----RKRILIVSVALFGLFSLATAQ-----AW--DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCG 147 (406)
T ss_pred ----CchhHHHHHHHHHHHHHHHHH-----hc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 888999998888888766322 22 35566677788899999888888888999997 6799999999988
Q ss_pred hhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhccc
Q 008597 165 LGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIF 244 (560)
Q Consensus 165 ~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 244 (560)
..+|+.+...+.....+..
T Consensus 148 ~~~g~~~~~~~~~~~~~~~------------------------------------------------------------- 166 (406)
T PRK11551 148 VPFGGALASVIGVLAAGDA------------------------------------------------------------- 166 (406)
T ss_pred HHHHHHHHHHHHHHHcccc-------------------------------------------------------------
Confidence 8888877653332211100
Q ss_pred ccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccc
Q 008597 245 TFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKA 324 (560)
Q Consensus 245 ~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (560)
+....+.+...+.++..+.... ..| +. ++...+ + ++++ +.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~--~l~----~~-----------------~~~~~~-~-----~~~~------~~----- 206 (406)
T PRK11551 167 AWRHIFYVGGVGPLLLVPLLMR--WLP----ES-----------------RAFAQA-A-----GAGK------QR----- 206 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHH--hCC----CC-----------------hhHHhc-c-----Ccch------hh-----
Confidence 0000000000000000000000 000 00 000000 0 0000 00
Q ss_pred ccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccc
Q 008597 325 EFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYV 404 (560)
Q Consensus 325 ~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~l 404 (560)
+ ... ....+-.+.+..+.++..+++.......+.++.+++.++.|.++.+.+...++.++.+.+|++++|++
T Consensus 207 ----~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l 278 (406)
T PRK11551 207 ----A---PVL-RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGAL 278 (406)
T ss_pred ----h---hhH-HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 00001112233444444454444444556677889999999998888999999999999999999999
Q ss_pred hhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 405 SDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 405 sD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
+||+++| ..+.+.....+++.+++. .++...+.+..++.|++.++..+..++++.|.++.++.++..|+....
T Consensus 279 ~dr~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 352 (406)
T PRK11551 279 MDRLRPR------RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAV 352 (406)
T ss_pred HHHHhHH------HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHh
Confidence 9998643 233333333344443332 233344566778889988888888999999999999999999999888
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
..+|.. ++|.+.|.++|+.+. |...+.+...+++++.++.+.+
T Consensus 353 ~~~g~~-~g~~~~g~l~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 353 GRLGSM-AGPLLAGQLLALGRS-----------TVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhHHHH-HHhhhHhhhhccCCc-----------hHHHHHHHHHHHHHHHHHHHHH
Confidence 888884 789999999998653 7777777777766666555433
No 13
>PRK03699 putative transporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=206.54 Aligned_cols=373 Identities=12% Similarity=0.095 Sum_probs=250.0
Q ss_pred chhHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccccc
Q 008597 10 KSKWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFL 87 (560)
Q Consensus 10 ~~rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~ 87 (560)
.|||.+...+.+.. +..+..+.++...+++++++|+|.+|...+.....++..+ .++.|++.||+|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g------------ 70 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIP------------ 70 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------------
Confidence 47777766666665 4445578899999999999999999999877777777766 678899999987
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhh
Q 008597 88 RGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLG 166 (560)
Q Consensus 88 ~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~G 166 (560)
+|.++.++.++..++..+... .+ +++.+...-++.|.+.+..+..+.....++||+ +||.+.++..+..+
T Consensus 71 --~r~~~~~~~~~~~i~~~l~~~-----~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 141 (394)
T PRK03699 71 --LKRQLIFGFALMILAVAGLMF-----SH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFS 141 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHH-----cc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHH
Confidence 888899998888888877422 22 355566666777888888888888888899985 69999998888888
Q ss_pred hhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhccccc
Q 008597 167 LGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTF 246 (560)
Q Consensus 167 Lsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 246 (560)
+++.+...+...+.. +..+.
T Consensus 142 ~g~~~~~~~~~~l~~------------------------------------------------------------~~~gw 161 (394)
T PRK03699 142 MAGMIFPIIAAYLLA------------------------------------------------------------RSIEW 161 (394)
T ss_pred HHHHHHHHHHHHHHh------------------------------------------------------------ccccH
Confidence 888776533332211 00111
Q ss_pred chhHHHHHHHHHHH-HhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccc
Q 008597 247 PLWARIITFLFLLF-LLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAE 325 (560)
Q Consensus 247 ~~~~~~~~~~~~~~-ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (560)
...+.+.....++. ++..+ .+ . ++++++. +++ +
T Consensus 162 ~~~f~~~~~~~~~~~~~~~~----~~----~----------------p~~~~~~---------~~~------~------- 195 (394)
T PRK03699 162 YWVYACIGLVYVAIFILTLF----SE----F----------------PALGKHA---------PKA------D------- 195 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHh----cC----C----------------ccccccC---------ccc------c-------
Confidence 11111111111110 11100 00 0 0000000 000 0
Q ss_pred cccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccc
Q 008597 326 FDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYV 404 (560)
Q Consensus 326 ~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~l 404 (560)
+ + ..+ ...++.+|++.+..++.......+.+++|.+.+ .+|+++.+++.+++++.+++.+||+++|++
T Consensus 196 ---~-~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l 264 (394)
T PRK03699 196 ---K-P-VAK------EKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFI 264 (394)
T ss_pred ---C-c-ccc------ccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 000 012467888888777766555566778898885 469998899999999999999999999999
Q ss_pred hhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 405 SDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 405 sD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
+||+++|+ . +.....+.++..+++. .+++..+.+..++.|++.++.++.......|.. .++.+...|.+...
T Consensus 265 ~dr~~~~~-----~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~ 337 (394)
T PRK03699 265 VRFFDLQR-----I-LTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKLVNFILTC 337 (394)
T ss_pred HHHhchhh-----H-HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHHHHHHHHh
Confidence 99986432 2 2333333333333332 233444555678889988888888777777755 46678888888777
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHh
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 540 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~ 540 (560)
..+|. .++|.+.|+++|..| ++.+|++.+++++++.++++.+.+
T Consensus 338 ~~~g~-~i~p~~~G~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 338 GTIGT-MLTFVVTSPIVAHFG------------LQAALLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred hhHHH-HHHHHHHHHHHHHhC------------chhhhhhhHHHHHHHHHHHHHHHH
Confidence 77887 488999999999876 888999999998888877666554
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=1.9e-21 Score=202.28 Aligned_cols=379 Identities=16% Similarity=0.064 Sum_probs=245.7
Q ss_pred ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHH
Q 008597 29 TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFL 107 (560)
Q Consensus 29 ~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~ 107 (560)
.+.++...+.+++++|+|.++...+..+..++..+ .++.|.+.||+| +|.++.++.++..++..+
T Consensus 10 ~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--------------~r~~~~~~~~~~~~~~~~ 75 (399)
T TIGR00893 10 RANLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFG--------------ARKTLAVFIVIWGVFTGL 75 (399)
T ss_pred HHhhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcC--------------cceeeHHHHHHHHHHHHH
Confidence 35677778999999999999999888888888776 788999999987 788899999888888877
Q ss_pred HHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCC-ch
Q 008597 108 MWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGR-PS 185 (560)
Q Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~-~~ 185 (560)
.... . +++.+....++.|.|.+...++......+++| ++||.+.|+.....++|+.+...+...+.+.. ..
T Consensus 76 ~~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 148 (399)
T TIGR00893 76 QAFA-----G--AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQ 148 (399)
T ss_pred HHHH-----c--CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCch
Confidence 5332 1 35667777788899999999999999999998 57999999999999999888765544332110 01
Q ss_pred hHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcc
Q 008597 186 TYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSP 265 (560)
Q Consensus 186 ~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p 265 (560)
..+...+...... .+...
T Consensus 149 ~~~~~~~~~~~~~--------------------------------------------------------------~~~~~ 166 (399)
T TIGR00893 149 WAFIIEGVLGIIW--------------------------------------------------------------GVLWL 166 (399)
T ss_pred HHHHHHHHHHHHH--------------------------------------------------------------HHHhh
Confidence 1111111111000 00000
Q ss_pred cccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcC
Q 008597 266 LGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCT 345 (560)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt 345 (560)
. ..+ +.++.++. .++++ .+ +..+. . ..+. +++++++.+..+.++.+|+
T Consensus 167 ~--~~~----~~~~~~~~---------~~~~~-~~----~~~~~-~----~~~~-------~~~~~~~~~~~~~~~~~~~ 214 (399)
T TIGR00893 167 K--FIP----DPPQKAKW---------LTEEE-KY----IVVGG-L----LAEQ-------QGKGPSTPKKYQIKELLKD 214 (399)
T ss_pred h--eec----CCCCcccc---------CCHHH-Hh----hcchh-h----cccc-------ccccccCCCccchHHHhcC
Confidence 0 000 00000000 00000 00 00000 0 0000 0000011122456889999
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
+++|.+.+..++.......+....+.+.++ +|.++.+++.+.++..+.+.+|++++|+++||+++|+. +........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~ 292 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGK--SLVFARKTA 292 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhccc--chhHHHHHH
Confidence 999999988888877777777788888764 68888888888999999999999999999999987641 111111111
Q ss_pred --HHHHHHHHHHhhc--CcchHHHHHHHHHh-hhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 425 --ATMSVGHIVVASG--FPGNLYVGSIIVGV-CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 425 --~l~~~~~lll~~~--~~~~l~~~~~l~G~-~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
.....+......+ ......+....++. +.| ..+....++.|.++.++.++.+|+......+|.. +++.+.|.+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-~~~~i~g~l 370 (399)
T TIGR00893 293 IIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGI-VGPIVIGAI 370 (399)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhh-hhhHHhhhh
Confidence 1111111111111 11122333333333 444 6788888999999999999999999888888884 788999999
Q ss_pred cccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 500 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
+|..|+ |+..|.+.+++++++.++.++
T Consensus 371 ~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 371 AATTGS-----------FAGALMVVAALALIGALSYLL 397 (399)
T ss_pred ccCCCc-----------hhHHHHHHHHHHHHHHHHHHH
Confidence 998763 899999999888887765543
No 15
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=2.8e-21 Score=209.01 Aligned_cols=408 Identities=15% Similarity=0.107 Sum_probs=242.3
Q ss_pred hhHHHHHHHHHHHHhcC-cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccC
Q 008597 11 SKWIATVASIWIQCCSG-ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLR 88 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G-~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~ 88 (560)
.||..+.+..+...+.. ....++...+.+++ .|+|++|...+..+..++..+ .++.|++.||+|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g------------- 89 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSN------------- 89 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccC-------------
Confidence 46777666655553333 24445666677776 599999999877777777766 678999999986
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhh
Q 008597 89 GPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGL 167 (560)
Q Consensus 89 Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GL 167 (560)
+|..+.++.++.+++.++.... .. .. .+++.++..-++.|.+.+..+.+......++|| ++||+++|+...+.++
T Consensus 90 -~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~ 165 (438)
T TIGR00712 90 -PRVFLPAGLILSAAVMLLMGFV-PW-AT-SSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI 165 (438)
T ss_pred -CceehHHHHHHHHHHHHHHhcc-cc-cc-chHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh
Confidence 7888889988888888774322 11 11 234555566677788888888888888899996 5799999999988888
Q ss_pred hHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccc
Q 008597 168 GGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFP 247 (560)
Q Consensus 168 sa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 247 (560)
++.+...+........ .+.+
T Consensus 166 g~~~~~~l~~~~~~~~------------------------------------------------------------~~w~ 185 (438)
T TIGR00712 166 GGGIPPLLVLLGMAWF------------------------------------------------------------NDWH 185 (438)
T ss_pred HhHHHHHHHHHHHHHh------------------------------------------------------------hhhH
Confidence 8888764433221100 0000
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccc
Q 008597 248 LWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFD 327 (560)
Q Consensus 248 ~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (560)
..+.+.....++..+..... .+.+.++ .+. ++.+. ++ ++.+.+.. .++
T Consensus 186 ~~f~~~~~~~~i~~~~~~~~--~~~~~~~-~~~------------~~~~~---~~--~~~~~~~~---~~~--------- 233 (438)
T TIGR00712 186 AALYFPAICAIIVALFAFAM--MRDTPQS-CGL------------PPIEE---YR--NDYPDDYN---EKA--------- 233 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHh--ccCCHHh-cCC------------CCchh---cc--cccccccc---ccc---------
Confidence 00000000000100000000 1100000 000 00000 00 00000000 000
Q ss_pred cccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchh
Q 008597 328 DKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSD 406 (560)
Q Consensus 328 ~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD 406 (560)
+++ .+.++....+.+|++.+|.+.+..++.........++.|++.++ .|+++.+++...+++++.+.+|++++|+++|
T Consensus 234 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d 312 (438)
T TIGR00712 234 EQE-LTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSD 312 (438)
T ss_pred ccc-cchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00011112347899999999877666554445566788888886 5888888888889999999999999999999
Q ss_pred hhhhhcCCCchHHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 407 IVLHRMGWERPSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 407 ~~~~~~~~~R~~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
|+++++ |............++.+++.. .+....++..++.|+...+........+.|.++.++.|+..|+....
T Consensus 313 r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 389 (438)
T TIGR00712 313 KVFKGN---RGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLF 389 (438)
T ss_pred HhccCc---ccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchH
Confidence 986432 112111111111222222211 12222333334444432221112224577999999999999999766
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 544 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~ 544 (560)
...|+...+|.+.|.+.|..| |+.+|+++.+.+++++++.++++..+||
T Consensus 390 ~~~gg~~~gp~l~G~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 438 (438)
T TIGR00712 390 GYLGGSVAASAIVGYTVDFFG------------WDGGFMVMIGGSILAVILLIVVMIGEKR 438 (438)
T ss_pred HHhhhhhhcchhHHHHHHhcc------------chHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 666655578889999999775 9999999999999998888877765543
No 16
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.88 E-value=2.4e-21 Score=208.17 Aligned_cols=393 Identities=13% Similarity=0.070 Sum_probs=240.2
Q ss_pred hhHHHHHHHHHHHHhcC-cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccC
Q 008597 11 SKWIATVASIWIQCCSG-ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLR 88 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G-~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~ 88 (560)
.||.++....+.-.+.. -.+..+.-.+.+++++|+|.+|+..+..+..++..+ .++.|.+.||+|
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G------------- 71 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIG------------- 71 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC-------------
Confidence 34555444444433322 355667778999999999999999888888888766 689999999987
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhh
Q 008597 89 GPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGL 167 (560)
Q Consensus 89 Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GL 167 (560)
+|+++.++.++..++..+.. ..++ ++.+...-++.|.+.+..+.+......+|||+ +||.+.|+...+.++
T Consensus 72 -~r~~~~~~~~~~~~~~~~~~-----~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~ 143 (412)
T TIGR02332 72 -ARRWIAGIMVLWGIASTATM-----FATG--PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV 143 (412)
T ss_pred -hHHHHHHHHHHHHHHHHHHH-----HhcC--HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 89999999999999998842 2232 45566667788999998888888888999985 699999999999999
Q ss_pred hHHHHHHHHHHhcCC-------CchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHH
Q 008597 168 GGAALIQAYDTIWKG-------RPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIIL 240 (560)
Q Consensus 168 sa~i~s~i~~~~f~~-------~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 240 (560)
|..+...+...+.+. +...-++..++.....+++..++++..|.+. +
T Consensus 144 g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~----~---------------------- 197 (412)
T TIGR02332 144 TMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA----K---------------------- 197 (412)
T ss_pred HHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC----C----------------------
Confidence 888765544333210 1111111112222222222222221111100 0
Q ss_pred hcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcc
Q 008597 241 ENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEES 320 (560)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (560)
..++. +++. . ++. .+.+..+. .+++++
T Consensus 198 --------------------------------------~l~~~---~~~~------~---~~~-~~~~~~~~-~~~~~~- 224 (412)
T TIGR02332 198 --------------------------------------WLDEE---DKKA------L---KEM-IDNDQLTL-EQPEGA- 224 (412)
T ss_pred --------------------------------------CCCHH---HHHH------H---HHH-HHhccccc-cccccc-
Confidence 00000 0000 0 000 00000000 000000
Q ss_pred ccccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc--CCCCcchhHHHHHHHHhhhhhc
Q 008597 321 QVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL--GYPTSAINSLVSLWSIWNFLGR 398 (560)
Q Consensus 321 ~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l--G~~~~~aa~lvSl~si~n~~GR 398 (560)
.++++... ...++.++++.+|.....+++....-..+.+++|++.++. |.++.+++.+.++..+++.+|+
T Consensus 225 -------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~ 296 (412)
T TIGR02332 225 -------FAHAAMPQ-RSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGM 296 (412)
T ss_pred -------cccccccH-HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHH
Confidence 00000000 1123335579999999888887776667788999999885 5666777888899999999999
Q ss_pred cccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhh
Q 008597 399 FGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIF 477 (560)
Q Consensus 399 l~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~y 477 (560)
+++|+++||+++| +..+...+.+.+++.++.. .+.+...+....+.+++......+......|.++.|+.++.+
T Consensus 297 l~~g~l~dr~~~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~ 371 (412)
T TIGR02332 297 IWWSRHSDRLKER-----KHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAI 371 (412)
T ss_pred HHHHHHhcccCcc-----HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHH
Confidence 9999999998633 2222223333333333222 222211122222333333223333444556789999999999
Q ss_pred hHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHH
Q 008597 478 NTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVA 528 (560)
Q Consensus 478 G~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~ 528 (560)
|+.+....+|.. ++|.+.|.+.|..|+ |+.+|.+++++.
T Consensus 372 g~~~~~~~~g~~-~~p~~~g~i~~~~g~-----------~~~~~~~~~~~~ 410 (412)
T TIGR02332 372 AVINATGNIGSA-LSPFLIGILKDATGS-----------FNSGLWFVAALL 410 (412)
T ss_pred HHHHHhhhhhhh-hhhhhcccccccCCC-----------CchhHHHHHHHH
Confidence 999888888884 788999999998864 999998877654
No 17
>PRK03545 putative arabinose transporter; Provisional
Probab=99.88 E-value=2.9e-20 Score=197.44 Aligned_cols=366 Identities=11% Similarity=0.009 Sum_probs=239.1
Q ss_pred hhHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccC
Q 008597 11 SKWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLR 88 (560)
Q Consensus 11 ~rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~ 88 (560)
+||..+..-.+.+ +..-..|.-....|++++++|+|++|+..+.....++..+ .++.|.+.||+|
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g------------- 72 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVE------------- 72 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-------------
Confidence 4565333333333 2323344444567899999999999999777777777655 678999999986
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhh
Q 008597 89 GPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGL 167 (560)
Q Consensus 89 Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GL 167 (560)
+|+++.++.+...++..+. ...+ +++.+.+.-++.|.+.+..++.......+++| ++||.+.|+...+.++
T Consensus 73 -~r~~~~~~~~~~~~~~~~~-----~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~ 144 (390)
T PRK03545 73 -RRKLLIGLFVLFIASHVLS-----ALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTAL 144 (390)
T ss_pred -hHHHHHHHHHHHHHHHHHH-----HHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHH
Confidence 8999999999999998774 2223 35666666677888888877877778888987 5899999999999988
Q ss_pred hHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccc
Q 008597 168 GGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFP 247 (560)
Q Consensus 168 sa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 247 (560)
|.++-..+...+. +..+..
T Consensus 145 g~~ig~~l~~~l~-------------------------------------------------------------~~~gw~ 163 (390)
T PRK03545 145 AMVLGLPLGRVIG-------------------------------------------------------------QYLGWR 163 (390)
T ss_pred HHHHHhhHHHHHH-------------------------------------------------------------HHhcHH
Confidence 8877653332221 001111
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccc
Q 008597 248 LWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFD 327 (560)
Q Consensus 248 ~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (560)
..+.+.....++..+ ......| ++++ + + +
T Consensus 164 ~~f~~~~~~~~l~~~--~~~~~~~----------------------~~~~-~-----------~------~--------- 192 (390)
T PRK03545 164 TTFLAIGGGALITLL--LLIKLLP----------------------LLPS-E-----------H------S--------- 192 (390)
T ss_pred HHHHHHHHHHHHHHH--HHHHhCC----------------------CCCC-C-----------C------c---------
Confidence 111111111001000 0000000 0000 0 0 0
Q ss_pred cccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchh
Q 008597 328 DKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSD 406 (560)
Q Consensus 328 ~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD 406 (560)
+ . ..+.++.+|++.+|.++...++......+..+..+++.++ .|.++.+++.+.+++++.+.+|+++.|+++|
T Consensus 193 -~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~d 266 (390)
T PRK03545 193 -G---S--LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGN 266 (390)
T ss_pred -c---h--HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 0 0 0124678999999987766655554444455667777766 5888888888999999999999999999999
Q ss_pred hhhhhcCCCchHHHHHHHHHHHHHHHH-Hh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhh
Q 008597 407 IVLHRMGWERPSFIAITLATMSVGHIV-VA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIAS 484 (560)
Q Consensus 407 ~~~~~~~~~R~~~l~~~~~l~~~~~ll-l~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~ 484 (560)
|.++ +... +...+..++.++ .. .+++..+.+..++.|++.+.........+.+... ++.+...|+.....
T Consensus 267 r~~~------~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 338 (390)
T PRK03545 267 RHPS------GFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIF 338 (390)
T ss_pred ccch------hHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHH
Confidence 9742 2222 222333333322 22 2334456667888899888776667777777765 67888888776655
Q ss_pred hhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 485 PVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 485 ~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
.+|. .+++.+.|.++|+.+ |+..|.+.+.+.+++.+...
T Consensus 339 ~~g~-~~G~~~~G~~~~~~g------------~~~~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 339 NIGI-GAGALLGNQVSLHLG------------LSSIGYVGAALALAALVWSI 377 (390)
T ss_pred HHHH-HHHHHHHHHHHhccC------------hhHHHHHHHHHHHHHHHHHH
Confidence 6565 367888999999987 89999999988888776543
No 18
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.87 E-value=3e-20 Score=193.20 Aligned_cols=357 Identities=14% Similarity=0.110 Sum_probs=228.9
Q ss_pred cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHH
Q 008597 28 ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYF 106 (560)
Q Consensus 28 ~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~ 106 (560)
....++...+.+++++|+|.+|...+.....++..+ .++.|.+.||+| +|+++.+|.++..++.+
T Consensus 10 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g--------------~r~~~~~~~~~~~~~~~ 75 (379)
T TIGR00881 10 VRKNFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSN--------------PRVFLPIGLILCAIVNL 75 (379)
T ss_pred hHHhhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhC--------------CeehhHHHHHHHHHHHH
Confidence 456677888999999999999999888888888776 788999999986 88899999999999988
Q ss_pred HHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCC--C
Q 008597 107 LMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKG--R 183 (560)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~--~ 183 (560)
+.... . +++.++...++.|.+.+..+........+++|+ +||.+.|+...+..+|+.+...+....... +
T Consensus 76 ~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 148 (379)
T TIGR00881 76 FFGFS-----T--SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS 148 (379)
T ss_pred HHHHh-----h--hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCC
Confidence 75433 2 356677777888999999999999999999985 799999999999999988876322221100 0
Q ss_pred chhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhh
Q 008597 184 PSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLS 263 (560)
Q Consensus 184 ~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 263 (560)
....++..+......+++...+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 170 (379)
T TIGR00881 149 WHWVFIVPGIIAIIVSLICFLL---------------------------------------------------------- 170 (379)
T ss_pred chhHHHHHHHHHHHHHHHHhee----------------------------------------------------------
Confidence 0000111111111110000000
Q ss_pred cccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHh
Q 008597 264 SPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSV 343 (560)
Q Consensus 264 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l 343 (560)
.+ +.++.++ . ++.++... ++ +++++ +.+ ++ ..+..+...++.+
T Consensus 171 ------~~----~~~~~~~------~---~~~~~~~~-----~~-~~~~~--~~~---------~~-~~~~~~~~~~~~~ 213 (379)
T TIGR00881 171 ------LR----DSPQSCG------L---PPAEEMPN-----EE-PDGDA--EKK---------EE-ELTKKQIFLQYVL 213 (379)
T ss_pred ------eC----CCccccc------c---CccccCcc-----cc-ccccc--ccc---------cc-cccchHHHHHHHH
Confidence 10 0000000 0 00000000 00 00000 000 00 0011123457789
Q ss_pred cChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHH
Q 008597 344 CTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI 422 (560)
Q Consensus 344 kt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~ 422 (560)
|++.+|.+.+..++.......+....+.+.+ .+|.++.+++.+.++.++.+.+|+++.|+++||..+++ |......
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~---~~~~~~~ 290 (379)
T TIGR00881 214 LNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGR---RGPLAVF 290 (379)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc---chHHHHH
Confidence 9999999988877776655555667777775 46998888889999999999999999999999865432 1111111
Q ss_pred HHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 423 TLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 423 ~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
......++...+.. .+.....+..++.|+..++.......++.|.++.++.++.+|+......+|.. +++.+.|.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~-~~~~~~g~l 369 (379)
T TIGR00881 291 FMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGI-LAGLPLGYL 369 (379)
T ss_pred HHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhh-hhhhhHHHH
Confidence 11222222222211 12223444556677766666666778899999999999999999888888884 788999999
Q ss_pred ccccc
Q 008597 500 YDNVA 504 (560)
Q Consensus 500 yD~~g 504 (560)
.|..|
T Consensus 370 ~~~~g 374 (379)
T TIGR00881 370 ADGFG 374 (379)
T ss_pred HHhhc
Confidence 99876
No 19
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.86 E-value=1.2e-19 Score=194.22 Aligned_cols=362 Identities=12% Similarity=0.066 Sum_probs=229.3
Q ss_pred hhHHHHHHHHHHHHhcCccc-ccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccC
Q 008597 11 SKWIATVASIWIQCCSGATY-TFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLR 88 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G~~Y-~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~ 88 (560)
.+|..+..+.+...+.+..+ ..+...+.+++++|+|..|...+.....++..+ .++.|.+.||+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g------------- 81 (426)
T PRK12307 15 PQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFG------------- 81 (426)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------
Confidence 44555555555566655533 345555888999999999999888888888776 778999999986
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhh
Q 008597 89 GPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGL 167 (560)
Q Consensus 89 Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GL 167 (560)
+|+++.++.++..++..+.... + +++.+...-++.|.|.+..+.+......++||+ +||.+.|+...+.++
T Consensus 82 -~r~~l~~~~~~~~~~~~~~~~~-----~--~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l 153 (426)
T PRK12307 82 -RKPLMMWSIVAYSVGTGLSGLA-----S--GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI 153 (426)
T ss_pred -ChHHHHHHHHHHHHHHHHHHHH-----h--HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH
Confidence 8999999999999998874322 2 356677777889999999999988889999985 599999999999999
Q ss_pred hHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccc
Q 008597 168 GGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFP 247 (560)
Q Consensus 168 sa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 247 (560)
|..+...+...+.+.......++++..+
T Consensus 154 g~~~~~~l~~~l~~~~~w~~~f~i~~~~---------------------------------------------------- 181 (426)
T PRK12307 154 GNIIAAYFMPSFAEAYGWRAAFFVGLLP---------------------------------------------------- 181 (426)
T ss_pred HHHHHHHHHHHHcccCCHHHHHHHHHHH----------------------------------------------------
Confidence 9888754433221110000010000000
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccc
Q 008597 248 LWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFD 327 (560)
Q Consensus 248 ~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (560)
.++.+.... ..| +.++.+ +++.+ ++.+ .++ +
T Consensus 182 ----------~~~~~~~~~--~~p----~~~~~~-----------~~~~~----------~~~~-----~~~-------~ 212 (426)
T PRK12307 182 ----------VLLVIYIRA--RAP----ESKEWE-----------EAKLS----------GKGK-----HSQ-------S 212 (426)
T ss_pred ----------HHHHHHHHH--HCC----CChHHH-----------Hhhhh----------cccc-----ccc-------c
Confidence 000000000 000 000000 00000 0000 000 0
Q ss_pred cccccccccCcHHHHhcChhHHHHHHHHHH---hhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccc
Q 008597 328 DKKLKDEEDMNILQSVCTLNFWLLFVAMLC---GMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYV 404 (560)
Q Consensus 328 ~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~---~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~l 404 (560)
.. .....+.++.+|++.+|.....+.+ ..+....+.+.++++.++.|.++...+.+.++..+++.+|++++|++
T Consensus 213 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l 289 (426)
T PRK12307 213 AW---SVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLC 289 (426)
T ss_pred ch---hhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0011356789999999875543322 22222334567888888889988888888899999999999999999
Q ss_pred hhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhh--hccccchhhHHHHhccCCchhhhhhHHH
Q 008597 405 SDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCY--GCQWSLMPTITYEIFGVGHMGTIFNTIA 481 (560)
Q Consensus 405 sD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~--G~~~~l~p~i~~e~FG~k~~g~~yG~~~ 481 (560)
+||+++| ..+.....+.++..+++. ........+..+++|+++ .+..++.|.++.|.++.++.|+..|+..
T Consensus 290 ~dr~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~ 363 (426)
T PRK12307 290 ADRIGLK------KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIY 363 (426)
T ss_pred HHHhccH------HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHH
Confidence 9999643 333333333333333222 222222233344444433 3446778899999999999999999987
Q ss_pred hhhhhHHhhhhhhhhhhhccccc
Q 008597 482 IASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 482 ~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
....+|.. ++|.+.|++.|+.+
T Consensus 364 ~~~~~~~~-~gp~~~g~l~~~~g 385 (426)
T PRK12307 364 NLAATSGT-FNSMAATWLGITMG 385 (426)
T ss_pred HHHhHHHH-HHHHHHHHHHHccc
Confidence 77777774 78899999999875
No 20
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.85 E-value=1.4e-19 Score=190.61 Aligned_cols=385 Identities=13% Similarity=0.091 Sum_probs=235.7
Q ss_pred hchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccc
Q 008597 9 LKSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSF 86 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~ 86 (560)
.+++|..+.+..+...+.+. .+.++...+++++++|+|.+|...+.....++..+ .++.|.+.||+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g----------- 75 (405)
T TIGR00891 7 TRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYG----------- 75 (405)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------
Confidence 45788888777777766654 55678888999999999999999777777777766 788999999987
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhh
Q 008597 87 LRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFL 165 (560)
Q Consensus 87 ~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~ 165 (560)
+|.++.++.++..++.++.. ..+ +++.++..-++.|.+.+..+.++.....+++| ++||.+.|+...+.
T Consensus 76 ---~r~~~~~~~~~~~~~~~~~~-----~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 145 (405)
T TIGR00891 76 ---RRLPMVTSIVLFSAGTLACG-----FAP--GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGY 145 (405)
T ss_pred ---cHHHHHHHHHHHHHHHHHHH-----Hhc--cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHH
Confidence 88899999998888887742 222 36677777889999999999999888999997 57999999999999
Q ss_pred hhhHHHHHHHHHHhcCC--CchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcc
Q 008597 166 GLGGAALIQAYDTIWKG--RPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENI 243 (560)
Q Consensus 166 GLsa~i~s~i~~~~f~~--~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 243 (560)
++|..+...+...+.+. +.....+.++..+...+++.
T Consensus 146 ~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~----------------------------------------- 184 (405)
T TIGR00891 146 AVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWL----------------------------------------- 184 (405)
T ss_pred HHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHH-----------------------------------------
Confidence 99888776554433211 00111111111111110000
Q ss_pred cccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccc
Q 008597 244 FTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVK 323 (560)
Q Consensus 244 ~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (560)
.. ..| +.++.++. ++.+....+ +.+ + ...++
T Consensus 185 -----------------~~------~~~----~~~~~~~~---------~~~~~~~~~----~~~--~---~~~~~---- 215 (405)
T TIGR00891 185 -----------------RK------NIP----EAEDWKEK---------HAGKALVRT----MVD--I---LYGGE---- 215 (405)
T ss_pred -----------------HH------hCC----CChhHHHH---------hhhhhhhhh----HHH--H---Hhccc----
Confidence 00 000 00000000 000000000 000 0 00000
Q ss_pred cccccccccccccCcHHHHhcC--hhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccc
Q 008597 324 AEFDDKKLKDEEDMNILQSVCT--LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFG 400 (560)
Q Consensus 324 ~~~~~~~~~~~~~~t~~~~lkt--~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~ 400 (560)
... +.. .+..-...++..+. +.|+.+.....+.........+..+.+.+ ++|.+..+.+.+.++.++...+|+++
T Consensus 216 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~ 293 (405)
T TIGR00891 216 HRI-ANI-VMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCV 293 (405)
T ss_pred hhh-hhh-hhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 00000001111111 11222222222222222233455666664 56999888889999999999999999
Q ss_pred cccchhhhhhhcCCCchHHHHHHHHHHHHHHH-HHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhh
Q 008597 401 GGYVSDIVLHRMGWERPSFIAITLATMSVGHI-VVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFN 478 (560)
Q Consensus 401 ~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l-ll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG 478 (560)
.|+++||+++|+ .+.+...+..+..+ ++.. ++...+.+...+.|++.++.+++.|..+.|.++.++.++.+|
T Consensus 294 ~g~l~dr~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 367 (405)
T TIGR00891 294 FGFLGDWLGRRK------AYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLG 367 (405)
T ss_pred HHHHHHHhCchh------hhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhh
Confidence 999999996443 22233232222221 2222 222334445577788888888999999999999999999999
Q ss_pred HHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHH
Q 008597 479 TIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIM 524 (560)
Q Consensus 479 ~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~ 524 (560)
+......+|.. ++|++.|.++|+.|+ |+.+|..+
T Consensus 368 ~~~~~~~~g~~-~g~~~~g~l~~~~g~-----------~~~~~~~~ 401 (405)
T TIGR00891 368 FTYQLGNLGGA-LAPIIGALLAQRLDE-----------YGTALASL 401 (405)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhccc-----------cchhHHhh
Confidence 98777777774 788999999999874 77766654
No 21
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.85 E-value=7.7e-19 Score=187.75 Aligned_cols=381 Identities=13% Similarity=0.100 Sum_probs=240.8
Q ss_pred chhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccC
Q 008597 10 KSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLR 88 (560)
Q Consensus 10 ~~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~ 88 (560)
++.+...++.+..+...+..|. |-+++.+++|+|.+|...+.....++..+ .++.|.+.||+|
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g------------- 76 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQG---WLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIG------------- 76 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHH---hHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcC-------------
Confidence 3445555666666666665554 33666678999999999877777777665 788999999986
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhc-cCCCcceeeehhhhhhh
Q 008597 89 GPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNF-GDYGGTIVGIMKGFLGL 167 (560)
Q Consensus 89 Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~F-p~~RG~a~Gi~~~~~GL 167 (560)
+|+++.++.++..++..+.-+ .+... .+++.+....++.|.|.+....+......+++ |++||.+.|+..++.++
T Consensus 77 -~k~~l~~~~~~~~~~~~~~~~--~~~~~-~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 152 (402)
T TIGR00897 77 -PLKTMMIGLLLWCVGHAAFIV--FGLGH-ANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSI 152 (402)
T ss_pred -cHHHHHHHHHHHHHHHHHHHH--HhccC-ccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 899999999998888654311 12211 23555555666778887776666666677776 57899999999999888
Q ss_pred hHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccc
Q 008597 168 GGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFP 247 (560)
Q Consensus 168 sa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 247 (560)
|..+++++..... +...+. . ..
T Consensus 153 g~~~~g~~~~~~l-------------------------~~~~g~----~-~~---------------------------- 174 (402)
T TIGR00897 153 GIGVFGSYYSSYA-------------------------IPAFGE----M-NT---------------------------- 174 (402)
T ss_pred HHHHHHHHHHHhc-------------------------ccccch----H-HH----------------------------
Confidence 8655543322221 000000 0 00
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccc
Q 008597 248 LWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFD 327 (560)
Q Consensus 248 ~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (560)
..+..+...+..++. .. .. ++. .+|+. . + ++ + +
T Consensus 175 -~~~~~~~~~~~~~~~-~~--~~----~~~---------------~~~~~-~------~-~~-~------~--------- 207 (402)
T TIGR00897 175 -LWSALAFVLTGGVIA-LF--SN----KDI---------------FTPQH-M------Q-TR-E------K--------- 207 (402)
T ss_pred -HHHHHHHHHHHHHHH-Hh--cc----CCC---------------CCccc-c------c-CC-c------c---------
Confidence 000000000000000 00 00 000 00000 0 0 00 0 0
Q ss_pred cccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhh
Q 008597 328 DKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI 407 (560)
Q Consensus 328 ~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~ 407 (560)
. ++....+++.+|+|.+|.+.+..++.........+..|.+.+++|++..+.+.+.++..+++.+|++..|+++||
T Consensus 208 ---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 283 (402)
T TIGR00897 208 ---F-SELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK 283 (402)
T ss_pred ---h-hhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000012457899999999887777665555566678888888899998888888899999999999999999999
Q ss_pred hhhhcCCCchHHHHHHHHHHHHH---HHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH
Q 008597 408 VLHRMGWERPSFIAITLATMSVG---HIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA 481 (560)
Q Consensus 408 ~~~~~~~~R~~~l~~~~~l~~~~---~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~ 481 (560)
+++|+ ..........+++ +..... ++....++..++.|++.+...+. ..++.|. .+++.|+.+|+.+
T Consensus 284 ~~~~~-----~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~-~~~~~g~~~g~~~ 356 (402)
T TIGR00897 284 LGWMN-----TVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTL-APKHKGAAMSVLN 356 (402)
T ss_pred hcchh-----HHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhh-CcchhHHHHHHHH
Confidence 86433 2211111222222 111111 22334556778889888875443 4556665 5679999999999
Q ss_pred hhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 482 IASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 482 ~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
.+..+|.. ++|++.|.++|..| |...|.+.+++.+++.++..+++
T Consensus 357 ~~~~lg~~-~gp~i~g~l~~~~g------------~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 357 LSAGLSAF-LAPAIAVLFIGFFG------------AIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHH-HHHHHHHHHHhhcc------------hHHHHHHHHHHHHHHHHHHHHhc
Confidence 98888884 79999999999876 88899999988888887766553
No 22
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.85 E-value=3.5e-20 Score=201.59 Aligned_cols=372 Identities=12% Similarity=0.049 Sum_probs=233.5
Q ss_pred hcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCc
Q 008597 42 SQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPP 120 (560)
Q Consensus 42 ~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~ 120 (560)
+++++.++...+..+..++..+ .++.|.+.||+| +|.++.++.++..++.++...... .+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g--------------~r~~l~~~~~~~~~~~~~~~~~~~-----~~ 130 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYV--------------FKWSIGIGMFLSSVISIVIPWAAG-----GG 130 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhC--------------cchhhHHHHHHHHHHHHHHHHHHH-----cC
Confidence 6889999999888788788776 788999999987 888999998888888776433222 12
Q ss_pred HHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHH
Q 008597 121 VPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFAS 199 (560)
Q Consensus 121 ~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~ 199 (560)
++.+.+..++.|.+.+..+.+......+||| ++||++.|+..++..+|.++...+...+.+..
T Consensus 131 ~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~---------------- 194 (465)
T TIGR00894 131 IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW---------------- 194 (465)
T ss_pred chHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------
Confidence 4456777889999999999999999999998 58999999999999999988865544332100
Q ss_pred HhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccC
Q 008597 200 LLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTR 279 (560)
Q Consensus 200 ~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~ 279 (560)
.+....+.+.+...++..+..... .+ + +
T Consensus 195 --------------------------------------------~gw~~~f~i~~~~~~~~~~~~~~~--~~----~--~ 222 (465)
T TIGR00894 195 --------------------------------------------GGWPMIFYVFGIVGCAWSLLWFVF--PA----D--D 222 (465)
T ss_pred --------------------------------------------CCCCeehhhhhHHHHHHHHHHHHH--hc----C--C
Confidence 011111111111111111100000 00 0 0
Q ss_pred CCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHhh
Q 008597 280 LSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGM 359 (560)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~ 359 (560)
|. +++...++|+ +..++ .. ++ +++ +..+...+++.+|++.+|.+++..++..
T Consensus 223 ----------p~-~~~~~~~~~~-----~~i~~-~~--~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (465)
T TIGR00894 223 ----------PS-IHPCISKFEK-----KYINS-SL--QG--------QKG-STRQSLPIKAIPKSLPVWAIWFAIFGHF 274 (465)
T ss_pred ----------cc-cCCCCCHHHH-----HHHHh-hc--cc--------ccC-CCCCCCCHHHHhcCHHHHHHHHHHHHHH
Confidence 00 0000000000 00000 00 00 000 0111235789999999999999888877
Q ss_pred hhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHH----HHHHHHHHHHHHHH
Q 008597 360 GSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI----AITLATMSVGHIVV 434 (560)
Q Consensus 360 g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l----~~~~~l~~~~~lll 434 (560)
.....+..++|.+.++ +|++..+.+.+.++..+++.+++++.|+++||+.+|+...|.... .+.....++..+..
T Consensus 275 ~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (465)
T TIGR00894 275 WLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYAL 354 (465)
T ss_pred HHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666777888988764 699888888888999999999999999999999876543333221 11111111111111
Q ss_pred hh-c-CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCccc
Q 008597 435 AS-G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCN 512 (560)
Q Consensus 435 ~~-~-~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~ 512 (560)
.. . ......+...+.+.+.+......-....|..+ ++.|...|+.++...+|+. ++|.+.|++.|.+.
T Consensus 355 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~l~~~-i~p~l~g~~~~~~~-------- 424 (465)
T TIGR00894 355 PYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAP-RFLGFIKGITGLPGFIGGL-IASTLAGNILSQDS-------- 424 (465)
T ss_pred HHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcCh-hHHHHHHHHHHHHHHHHHH-HHHHhhheeeCCCC--------
Confidence 11 1 22222233344444555444444344456555 6999999999998889995 77889999988642
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 513 GTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 513 G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
.+-|+.+|.+.+++++++.++.....
T Consensus 425 -~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 425 -KNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred -chHHHHHHHHHHHHHHHHHHHeeeee
Confidence 12499999999999988887665544
No 23
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=5.2e-19 Score=191.92 Aligned_cols=388 Identities=13% Similarity=0.118 Sum_probs=240.8
Q ss_pred HHHHHHHHH-HhcCcccccccccHHHHh-hcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcH
Q 008597 15 ATVASIWIQ-CCSGATYTFGIYSSTLKS-SQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPW 91 (560)
Q Consensus 15 ~l~~~~~i~-~~~G~~Y~fs~ys~~l~~-~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~ 91 (560)
.+..+++.- ++--.-+.||.-.+.+++ .+|+|.+|+..+.....++..+ -++.|.+.||+| +|
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G--------------~R 100 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFG--------------GR 100 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------Ch
Confidence 444444332 555567778887788876 7999999999777666666666 489999999987 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHH
Q 008597 92 VVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGA 170 (560)
Q Consensus 92 ~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~ 170 (560)
.+..++.++..++.++...+.+... .+++.+++..++.|.+ +..+.+++....+|||+ +||++.|+..+...+|+.
T Consensus 101 ~v~~~~~ll~~i~~~~~~~a~~~~~--~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~ 177 (462)
T PRK15034 101 RWTVFSTAILIIPCVWLGIAVQNPN--TPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVS 177 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccC--CCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHH
Confidence 9999999998888887544333322 3477888888888998 77889999999999996 599999999866667777
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhHHHH--HhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccch
Q 008597 171 ALIQAYDTIWKGRPSTYLLILALLPTFAS--LLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL 248 (560)
Q Consensus 171 i~s~i~~~~f~~~~~~fll~la~~~~~v~--~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 248 (560)
+...+.. .++. +....--+..+.. ..++.- .+... .+|.+
T Consensus 178 l~~~l~p------------------~~i~~~l~~~~G~~~~~~~-~g~~~~---~~~~~---~~~~~------------- 219 (462)
T PRK15034 178 VMQLVAP------------------LVIFVPVFAFLGVNGVPQA-DGSVMS---LANAA---WIWVP------------- 219 (462)
T ss_pred HHHHHHH------------------HHHHHHHHHHhcccccccc-ccchHH---HHHHH---HHHHH-------------
Confidence 6643322 2111 1111000000000 000000 00000 01110
Q ss_pred hHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccc
Q 008597 249 WARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDD 328 (560)
Q Consensus 249 ~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (560)
..++ ..++.. +. . +++++ + +
T Consensus 220 -----~~iv-~~i~~~-~~--~----------------------~~~~~-------------~----------------~ 239 (462)
T PRK15034 220 -----LLAI-ATIAAW-SG--M----------------------NDIAS-------------S----------------R 239 (462)
T ss_pred -----HHHH-HHHHHH-Hh--C----------------------CCccc-------------c----------------c
Confidence 0000 000110 00 0 00000 0 0
Q ss_pred ccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhh
Q 008597 329 KKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIV 408 (560)
Q Consensus 329 ~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~ 408 (560)
. +. ...++.+|+|+-|++.+.+++..+.-......+|.+.++ .++.........+..+...++|+++|+++||+
T Consensus 240 ~---~~--~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~~~~l~~~~l~~l~~~l~rplgG~LADRi 313 (462)
T PRK15034 240 A---SI--ADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPDVNILRLAFFGPFIGAIARSVGGAISDKF 313 (462)
T ss_pred c---CH--HHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHHhhHHHHHhc
Confidence 0 00 123679999999999999988877666666688888776 34433333334566888999999999999999
Q ss_pred hhhcCCCchHHHHHHHHHHHHHHH----HHhhc--Cc-ch----HHHHHHHHHhhhhccccchhhHHHH--h--------
Q 008597 409 LHRMGWERPSFIAITLATMSVGHI----VVASG--FP-GN----LYVGSIIVGVCYGCQWSLMPTITYE--I-------- 467 (560)
Q Consensus 409 ~~~~~~~R~~~l~~~~~l~~~~~l----ll~~~--~~-~~----l~~~~~l~G~~~G~~~~l~p~i~~e--~-------- 467 (560)
++++ .. .+.+..+.+..+ ++... .+ .. ++...+..|+++|+.|-+.|.+..+ .
T Consensus 314 G~~~-----vl-~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~ 387 (462)
T PRK15034 314 GGVR-----VT-LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGG 387 (462)
T ss_pred CchH-----HH-HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhccccccc
Confidence 7432 32 233333333221 11111 11 11 1122344588888888888776652 0
Q ss_pred -------ccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHh
Q 008597 468 -------FGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 540 (560)
Q Consensus 468 -------FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~ 540 (560)
-..++.|..-|++.....+|++ +-|++.|..+|.+|+ |..+|+...+..+++++++.+...
T Consensus 388 ~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf-~~p~~~g~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~w~~y~ 455 (462)
T PRK15034 388 SDEQAQREAVTETAAALGFISAIGAVGGF-FIPQAFGMSLNMTGS-----------PVGAMKVFLIFYIVCVLLTWLVYG 455 (462)
T ss_pred chhHHhhHHHHHHHHHHHHHHHHHHcccc-hhhHHHHHHHHHcCC-----------cHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1113788899999999999997 456789999999875 999999999998888877765554
Q ss_pred h
Q 008597 541 R 541 (560)
Q Consensus 541 r 541 (560)
|
T Consensus 456 r 456 (462)
T PRK15034 456 R 456 (462)
T ss_pred c
Confidence 3
No 24
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.84 E-value=3.6e-19 Score=186.38 Aligned_cols=332 Identities=13% Similarity=0.036 Sum_probs=221.5
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
.+++..-|++++++|+|.++...+.....++..+ .++.|++.||+| +|+++.+|.+...+|....
T Consensus 17 ~~~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g--------------~r~~~~~~~~~~~~~~~~~ 82 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFG--------------EERSVAAGLLLIAAGILIR 82 (355)
T ss_pred ccCcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--------------chHHHHHHHHHHHHHHHHH
Confidence 4667788999999999999999888888888876 788999999987 8889999988888877652
Q ss_pred HHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHH
Q 008597 109 WASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYL 188 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fl 188 (560)
..+ +.+.+....++.|.|.+...........++||++||.+.|+...+.++|..+-..+...+.+...
T Consensus 83 ------~~~--~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~---- 150 (355)
T TIGR00896 83 ------SAP--GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG---- 150 (355)
T ss_pred ------Hhc--cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----
Confidence 112 34555666778888888877777677788999999999999998888888776533222210000
Q ss_pred HHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH-HHhhcccc
Q 008597 189 LILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLL-FLLSSPLG 267 (560)
Q Consensus 189 l~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ll~~p~~ 267 (560)
+ ..+ ..+.......++ .++..|
T Consensus 151 ---------------------------~-----~w~-----------------------~~f~~~~~~~~~~~~~~~~-- 173 (355)
T TIGR00896 151 ---------------------------G-----HWQ-----------------------QALAWWALPALLALLAWIP-- 173 (355)
T ss_pred ---------------------------h-----hHH-----------------------HHHHHHHHHHHHHHHHHhh--
Confidence 0 000 000000000000 000101
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
+.+ +++++ + + .+ .+.+.++.+|++.
T Consensus 174 --------~~~--------------~~~~~-------------~------~----------~~----~~~~~~~~~~~~~ 198 (355)
T TIGR00896 174 --------QVR--------------RRVAA-------------N------Q----------TT----TRLTPVRIWRSPL 198 (355)
T ss_pred --------hhc--------------cccCC-------------C------C----------CC----CCCCCchhhcCHh
Confidence 000 00000 0 0 00 0022366789999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
+|.+.+.+++.........++++.+.++.|.++.+.+.+.++..+...+||+++|+++||+++ |+..+.+...+.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~-----~~~~~~~~~~~~ 273 (355)
T TIGR00896 199 AWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKD-----QRGIVAVLAVLQ 273 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcc-----chHHHHHHHHHH
Confidence 998877666655555566778899999899998888999999999999999999999999852 223444444445
Q ss_pred HHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccC-CchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 428 SVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 428 ~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~-k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
+++.+.+.........+..++.|+++|..++.....+.+.+.. ++.+..+|++.....++. .++|.+.|.+.|+.|+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 274 LVGLCGLLFAPMHGLWAWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLA-ALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcc
Confidence 5554433321111223356788999999988877777666654 566888888766566665 3788899999999875
No 25
>TIGR00895 2A0115 benzoate transport.
Probab=99.82 E-value=2.1e-19 Score=188.38 Aligned_cols=379 Identities=15% Similarity=0.088 Sum_probs=234.5
Q ss_pred hchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccc
Q 008597 9 LKSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSF 86 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~ 86 (560)
.+.+|..+..+.+...+.|. .+.++.+.+.+.+++|++..+...+.....++..+ .++.|.+.||+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g----------- 80 (398)
T TIGR00895 12 SRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIG----------- 80 (398)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhh-----------
Confidence 34567777777776665554 56778888999999999999999777777777766 678999999986
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhh
Q 008597 87 LRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFL 165 (560)
Q Consensus 87 ~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~ 165 (560)
+|.++.++.++..+++.+... .+ +++.+....++.|.+.+..+.+......+++| ++||.+.|+...+.
T Consensus 81 ---~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 150 (398)
T TIGR00895 81 ---RKRVLLWSILLFSVFTLLCAL-----AT--NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGY 150 (398)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHH-----cc--chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHH
Confidence 888999999888888877432 22 35566667788899999999998899999998 47999999999999
Q ss_pred hhhHHHHHHHHHHhcCCC-chhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhccc
Q 008597 166 GLGGAALIQAYDTIWKGR-PSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIF 244 (560)
Q Consensus 166 GLsa~i~s~i~~~~f~~~-~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 244 (560)
.+|+.+-+.+...+.+.. ....+++.++.+....++...+++..+...
T Consensus 151 ~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 199 (398)
T TIGR00895 151 PIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFL------------------------------- 199 (398)
T ss_pred HHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHH-------------------------------
Confidence 988887765554433211 111111111222222111111111100000
Q ss_pred ccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccc
Q 008597 245 TFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKA 324 (560)
Q Consensus 245 ~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (560)
.+++.++.. ++.+. .+ ++... ++++ ..++++
T Consensus 200 -------------------------------~~~~~~~~~-~~~~~-~~-~~~~~--------~~~~--~~~~~~----- 230 (398)
T TIGR00895 200 -------------------------------VSKRPETVR-RIVNA-IA-PQMQA--------EAQS--ALPEQK----- 230 (398)
T ss_pred -------------------------------HhcCHHHHH-HHHHH-HH-Hhccc--------cccc--cccccc-----
Confidence 000000000 00000 00 00000 0000 000000
Q ss_pred cccccccccccc--CcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccc
Q 008597 325 EFDDKKLKDEED--MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGG 402 (560)
Q Consensus 325 ~~~~~~~~~~~~--~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G 402 (560)
.+.+..++ ...++..+.+.+|.++..+++.........+..+.+.++.|.++.+.+...++.+++..+|++++|
T Consensus 231 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (398)
T TIGR00895 231 ----ATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLSLAATGGALFNFGGVIGSIIFG 306 (398)
T ss_pred ----cccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 001122223455666665555544444455566777778899988888899999999999999999
Q ss_pred cchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH
Q 008597 403 YVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA 481 (560)
Q Consensus 403 ~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~ 481 (560)
+++||+++| ..+...........++.. ..+...+++..++.|+++|...+...+.+.|.++.++.++.+|+..
T Consensus 307 ~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 380 (398)
T TIGR00895 307 WLADRLGPR------VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAI 380 (398)
T ss_pred HHHhhcchH------HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Confidence 999998532 222222222222222222 3344456677889999999999999999999999999999999998
Q ss_pred hhhhhHHhhhhhhhhhhh
Q 008597 482 IASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 482 ~a~~~g~~ll~~~l~G~i 499 (560)
....+|.. ++|.+.|++
T Consensus 381 ~~~~~g~~-~g~~~~G~l 397 (398)
T TIGR00895 381 GIGRLGAI-IGPILAGYL 397 (398)
T ss_pred HHHHHHHH-HHHHhHHhc
Confidence 87777774 788888865
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.82 E-value=4.9e-19 Score=189.46 Aligned_cols=396 Identities=13% Similarity=0.062 Sum_probs=229.7
Q ss_pred cHHHHhhcCCC--------hhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHH
Q 008597 36 SSTLKSSQNYD--------QSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYF 106 (560)
Q Consensus 36 s~~l~~~~~~s--------~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~ 106 (560)
-+.++++++++ +.|...+..+..++..+ .++.|.+.||+| +|++++++.++..+|..
T Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~g--------------rr~~~~~~~~~~~~~~~ 116 (481)
T TIGR00879 51 LALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFG--------------RKKSLLIIALLFVIGAI 116 (481)
T ss_pred hhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhh--------------hHHHHHHHHHHHHHHHH
Confidence 35666666666 88888777777777766 788999999986 89999999999998887
Q ss_pred HHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHH-H-Hhc-CC
Q 008597 107 LMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAY-D-TIW-KG 182 (560)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~-~-~~f-~~ 182 (560)
+.... .. ..+++.++..-++.|.|.+..+........+++| ++||.+.|+...+.++|+.+-..+. . .+. +.
T Consensus 117 ~~~~~--~~--~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~ 192 (481)
T TIGR00879 117 LMGLA--AF--ALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNT 192 (481)
T ss_pred HHHHh--cc--ccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 74221 11 1234567778899999999999988888999997 5799999999999999888877665 1 111 11
Q ss_pred CchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHh
Q 008597 183 RPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLL 262 (560)
Q Consensus 183 ~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll 262 (560)
......+.+...+..+.++...+++..|...
T Consensus 193 ~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~------------------------------------------------- 223 (481)
T TIGR00879 193 LGWRIPLGLQLIPAGLLFLGLFFLPESPRWL------------------------------------------------- 223 (481)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCChHHH-------------------------------------------------
Confidence 1122222222223333222222221110000
Q ss_pred hcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHH
Q 008597 263 SSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQS 342 (560)
Q Consensus 263 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~ 342 (560)
..+++.++. ....++..... +.+++..... ... ......+.+. .+......++.
T Consensus 224 ------------~~~~~~~~~-----~~~~~~~~~~~------~~~~~~~~~~-~~~-~~~~~~~~~~-~~~~~~~~~~~ 277 (481)
T TIGR00879 224 ------------VGKGRVEEA-----RKSLARLRGTS------GEDKELLDEL-ELI-DIKRSIEKRS-VQPSWGSLFSS 277 (481)
T ss_pred ------------HHcCChHHH-----HHHHHHHhCCC------CCcHHHHHHH-HHH-HHHHHHHHhh-ccccHHHHHhc
Confidence 000000000 00000000000 0000000000 000 0000000000 00000111222
Q ss_pred h---cChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 343 V---CTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 343 l---kt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
. +.+.+|...+.++........+....+.+.++.|++..+++.+.++..+.+.+|++++|+++||+++| ..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~------~~ 351 (481)
T TIGR00879 278 TRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR------PL 351 (481)
T ss_pred CchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------HH
Confidence 2 23445555444444333333344556777788899887778888899999999999999999999643 23
Q ss_pred HHHHHHHHHHHHHHHh---h--cC------cchHHHHHHHHHhhhhccc-cchhhHHHHhccCCchhhhhhHHHhhhhhH
Q 008597 420 IAITLATMSVGHIVVA---S--GF------PGNLYVGSIIVGVCYGCQW-SLMPTITYEIFGVGHMGTIFNTIAIASPVG 487 (560)
Q Consensus 420 l~~~~~l~~~~~lll~---~--~~------~~~l~~~~~l~G~~~G~~~-~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g 487 (560)
+.+.+.+++++.+++. . .. .........+++.+++..+ +....++.|.++.++.++..|+......+|
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg 431 (481)
T TIGR00879 352 LLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLA 431 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHH
Confidence 3344445455544332 1 11 1122233344444455433 455566699999999999999998888888
Q ss_pred HhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008597 488 SYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 543 (560)
Q Consensus 488 ~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r 543 (560)
+. +++.++|.+.|+.+ |+..|.+.++++++++++.+....++|
T Consensus 432 ~~-i~~~~~~~~~~~~~------------~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 432 NF-IVGFLFPTMLESIG------------VGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HH-HHHHHHHHHHHhcC------------ccceehhHHHHHHHHHHHHheecccCC
Confidence 85 67788999999765 788899999888888877665444333
No 27
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.82 E-value=6.3e-18 Score=179.65 Aligned_cols=368 Identities=13% Similarity=0.095 Sum_probs=225.3
Q ss_pred hHHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCC
Q 008597 12 KWIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 12 rw~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
+...++.+..+. ++ ......+....+++++|+|.+++..+..+..++..+ .++.|.+.||+|
T Consensus 16 ~~~~l~~~~~~~~~~--~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g-------------- 79 (399)
T PRK05122 16 RIVSIVMFTFISYLT--IGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLG-------------- 79 (399)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccC--------------
Confidence 334444444443 33 333444566678999999999999888888888776 788999999986
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH-hccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhh
Q 008597 90 PWVVHLTGAILCFAGYFLMWASV-VGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGL 167 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~-~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GL 167 (560)
+|+++.++.+...++........ .+......++.+++..++.|.|.+..+.+......+++| ++||.+.|+...+..+
T Consensus 80 ~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 159 (399)
T PRK05122 80 PKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYG 159 (399)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhH
Confidence 88999999888887766543332 111111124456667789999999988888877778875 6899999987666665
Q ss_pred hHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccc
Q 008597 168 GGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFP 247 (560)
Q Consensus 168 sa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 247 (560)
|..+-..+...+.+ ..+..
T Consensus 160 g~~~g~~l~~~l~~-------------------------------------------------------------~~g~~ 178 (399)
T PRK05122 160 ALAIGAPLGVLLYH-------------------------------------------------------------WGGLA 178 (399)
T ss_pred HHHHHHHHHHHHHH-------------------------------------------------------------cccHH
Confidence 54443322221110 00000
Q ss_pred hhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccc
Q 008597 248 LWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFD 327 (560)
Q Consensus 248 ~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (560)
..+-+......+.++. .+ + .+++ . +++ ++
T Consensus 179 ~~~~~~~~~~~~~~~~------~~----~-----------------~~~~-~---------~~~------~~-------- 207 (399)
T PRK05122 179 GLGLLIMLLALLGLLL------AR----P-----------------RPAV-P---------PVK------GE-------- 207 (399)
T ss_pred HHHHHHHHHHHHHHHH------Hh----c-----------------CCCC-C---------CCC------cc--------
Confidence 0000000000000000 00 0 0000 0 000 00
Q ss_pred cccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhh
Q 008597 328 DKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI 407 (560)
Q Consensus 328 ~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~ 407 (560)
+ .+.++.+| .+|.....+.+......+....++.+.++.|.+ +.+...+++.++..+|++..|++.||
T Consensus 208 -~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r 275 (399)
T PRK05122 208 -R-------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAARGWD--GAALALTLFGVAFVGARLLFGNLINR 275 (399)
T ss_pred -c-------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 01122222 223322222222111122344556666676663 44667788999999999999999999
Q ss_pred hhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhh
Q 008597 408 VLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV 486 (560)
Q Consensus 408 ~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~ 486 (560)
+++| ..+.....+.+++.+++. .+++..+.+..++.|+++|..+......+.|.+..++.|+.+|+......+
T Consensus 276 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 349 (399)
T PRK05122 276 LGGL------RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL 349 (399)
T ss_pred hccH------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 8533 233344445555554433 334445566778899999988877777788999999999999999887777
Q ss_pred HHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 487 GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
|.. +++++.|.+.|..| |+.+|.+.++++++++++...+
T Consensus 350 g~~-~~~~~~g~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~~ 388 (399)
T PRK05122 350 SLG-ITGPLAGLVASWFG------------YPSIFLAAALAALLGLALTWLL 388 (399)
T ss_pred HHH-HHHHHHHHHHHHcC------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 764 66788999999865 9999999998888877655443
No 28
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.82 E-value=4.7e-18 Score=182.00 Aligned_cols=386 Identities=10% Similarity=0.071 Sum_probs=241.7
Q ss_pred hhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCC
Q 008597 11 SKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
.+|+.+....+..... .+.+++.+..+++++|+|..++..+.....+...+ +++.|.+.||+|
T Consensus 11 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g-------------- 74 (400)
T PRK11646 11 GKYFLLIDNMLVVLGF--FVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFG-------------- 74 (400)
T ss_pred cHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhC--------------
Confidence 4577777777777665 44477778889999999999998666665555544 788999999986
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhh
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLG 168 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLs 168 (560)
+|+++.++.+...++..+.... + ++|.++...++.|.+.+....+......+++| ++||.+.|+......+|
T Consensus 75 ~k~~l~~~~~~~~~~~~~~~~~-----~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g 147 (400)
T PRK11646 75 AKPMIVTGMLMRAAGFATMAIA-----H--EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAG 147 (400)
T ss_pred chHHHHHHHHHHHHHHHHHHHh-----c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988875321 2 35666667778888887777777777788986 58999999988888888
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccch
Q 008597 169 GAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL 248 (560)
Q Consensus 169 a~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 248 (560)
..+-..+...+..- +...
T Consensus 148 ~~ig~~l~g~l~~~--------------------------------------------------------------g~~~ 165 (400)
T PRK11646 148 AVIGALLGSWLLQY--------------------------------------------------------------DFRL 165 (400)
T ss_pred HHHHHHHHHHHHHh--------------------------------------------------------------hHHH
Confidence 77664333322100 0000
Q ss_pred hHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccc
Q 008597 249 WARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDD 328 (560)
Q Consensus 249 ~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (560)
.+.+.....++..+.... ..| + +++ . + . +
T Consensus 166 ~f~~~~~~~~~~~i~~~~--~~~----~------------------~~~-~---------~-~------~---------- 194 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAW--LLP----A------------------YKL-S---------T-V------R---------- 194 (400)
T ss_pred HHHHHHHHHHHHHHHHHH--hCC----c------------------ccc-c---------c-c------c----------
Confidence 000000000000000000 000 0 000 0 0 0 0
Q ss_pred ccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhh
Q 008597 329 KKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIV 408 (560)
Q Consensus 329 ~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~ 408 (560)
+ +. ..++++.+|++.||.+.+.++.............|.+.++.+.++.+.+.+.++.++....+....+...|+.
T Consensus 195 ~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r 270 (400)
T PRK11646 195 T--PV--REGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKR 270 (400)
T ss_pred h--hh--HHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 00 0135678899999976655443332222334566777787766667777777777766654444444444542
Q ss_pred hhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhH
Q 008597 409 LHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVG 487 (560)
Q Consensus 409 ~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g 487 (560)
. + .++. +.....+.+++.+++. .++...+.+..++.|++.+...+..++++.+..+.++.|+.+|+..+...+|
T Consensus 271 ~---~-~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g 345 (400)
T PRK11646 271 F---R-LEHR-LMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALG 345 (400)
T ss_pred c---c-hhHH-HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHH
Confidence 1 1 1212 2334444555554443 2333344555677888888888888899999999999999999998888888
Q ss_pred HhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q 008597 488 SYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVL 551 (560)
Q Consensus 488 ~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~ 551 (560)
. .++|.+.|.++|+.++. +-+..+|.+.+.+++++.+. +....|++|.-|+.+|
T Consensus 346 ~-~ig~~l~G~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 399 (400)
T PRK11646 346 G-AIGYIGGGWLFDLGKAL--------NQPELPWMMLGIIGLITLLA-LYWQFSQKRIARRMLE 399 (400)
T ss_pred H-HhcccchHHHHHHHhhc--------CCcchHHHHHHHHHHHHHHH-HHHHHhhchHHHhhhc
Confidence 7 48999999999986421 12567777777777666543 4455666666666543
No 29
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.81 E-value=3.7e-18 Score=183.25 Aligned_cols=381 Identities=14% Similarity=0.080 Sum_probs=219.5
Q ss_pred hchhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccccc
Q 008597 9 LKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFL 87 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~ 87 (560)
.++-|...+.-.+...+.| ..++.++..+++++|+|++|+..+.....++..+ .++.|.+.||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g------------ 74 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWS--SWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLG------------ 74 (420)
T ss_pred CcchHHHHHHHHHHHHHHH--HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 4455766655555555544 3577888889999999999999666666666655 889999999987
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHH-HHhccCCCCcHHHHHHHHHHhhcccchhhhh---hHHHHhhhccCCCcceeeehhh
Q 008597 88 RGPWVVHLTGAILCFAGYFLMWA-SVVGLIHSPPVPLMCLFMFLAAHSQTFFNTG---NVVTGVMNFGDYGGTIVGIMKG 163 (560)
Q Consensus 88 ~Gp~~~~~~g~~~~~~G~~~~~l-~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~---~~~t~~~~Fp~~RG~a~Gi~~~ 163 (560)
+|+++.++.....++...... ....... ...+.. ..+++...+....+ .+.....+++++||.+.|...+
T Consensus 75 --~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 148 (420)
T PRK09528 75 --LKKHLLWIISGLLVLFGPFFIYVFAPLLQ-YNILLG---AIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARM 148 (420)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH---HHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHH
Confidence 788877766555544332211 1111111 011111 12222222222222 2233345567889999999999
Q ss_pred hhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcc
Q 008597 164 FLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENI 243 (560)
Q Consensus 164 ~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 243 (560)
...+|.++-+.+...+.+.+...-++..+
T Consensus 149 ~~~~g~~i~~~~~g~l~~~~~~~~f~~~~--------------------------------------------------- 177 (420)
T PRK09528 149 WGSLGWALCAFIAGILFNINPQINFWLGS--------------------------------------------------- 177 (420)
T ss_pred hhhHHHHHHHHHHHHHHhcCchHhHHHHH---------------------------------------------------
Confidence 98888888765544332111100000000
Q ss_pred cccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccc
Q 008597 244 FTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVK 323 (560)
Q Consensus 244 ~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (560)
...++.++. ....+ .+ + +++... .++++. +
T Consensus 178 -----------~~~~~~~~~---~~~~~---~~-~----------------~~~~~~------~~~~~~-----~----- 207 (420)
T PRK09528 178 -----------GSALILLVL---LFFAK---PD-A----------------PSTAKV------ANALGA-----N----- 207 (420)
T ss_pred -----------HHHHHHHHH---Hhccc---cc-c----------------cchhhh------ccchhc-----c-----
Confidence 000000000 00000 00 0 000000 000000 0
Q ss_pred cccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc----CCCCcchhHHHHHHHHhhhhhcc
Q 008597 324 AEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL----GYPTSAINSLVSLWSIWNFLGRF 399 (560)
Q Consensus 324 ~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l----G~~~~~aa~lvSl~si~n~~GRl 399 (560)
+++... ...++.+|+|.+|.+.+...+..........+.+.+..+. +.+..+.+.+.++..+.+.++.+
T Consensus 208 -----~~~~~~--~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 280 (420)
T PRK09528 208 -----ASAVSL--KDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMF 280 (420)
T ss_pred -----cccccH--HHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHH
Confidence 000000 1246788999999876654444332223334455555432 44445567788889999999999
Q ss_pred ccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhh
Q 008597 400 GGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFN 478 (560)
Q Consensus 400 ~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG 478 (560)
.+|+++||+++|+ .+.+...+.+++.++.. .+++..+++..++.|++++......-..+.|.++.+..++.++
T Consensus 281 ~~g~l~dr~g~~~------~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 354 (420)
T PRK09528 281 FAPFIINRIGAKN------ALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYL 354 (420)
T ss_pred HHHHHHHHhCcch------hhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeee
Confidence 9999999997543 23334444455544443 3455556666777788877766666677789999999999887
Q ss_pred H-HHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 479 T-IAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 479 ~-~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
. .+++..+|. .+++++.|+++|..| |+.+|.+.+++.+++.++.+
T Consensus 355 ~~~~~~~~lg~-~ig~~~~G~l~~~~G------------~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 355 VGFQFAKQLGA-VFLSTLAGNLYDSIG------------FQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred ehHHHHHHHHH-HHHHHHHHHHHHhhC------------chHHHHHHHHHHHHHHHHHH
Confidence 6 345566777 478889999999876 99999999888777665444
No 30
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.81 E-value=7.1e-18 Score=178.77 Aligned_cols=355 Identities=12% Similarity=0.021 Sum_probs=225.9
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcH
Q 008597 13 WIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPW 91 (560)
Q Consensus 13 w~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~ 91 (560)
|..+.+..+..+..+.. ..+-|++++++|+|.+|...+.....++..+ .++.|.+.||+| +|
T Consensus 9 ~~~~~~~~~~~~~~~~~---~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g--------------~k 71 (381)
T PRK03633 9 LLLLCGLLLLTLAIAVL---NTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIG--------------FN 71 (381)
T ss_pred HHHHHHHHHHHHhhhhH---HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH--------------HH
Confidence 44444444444444433 3456888899999999999888888888776 778999999987 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhc-cCCCcceeeehhhhhhhhHH
Q 008597 92 VVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNF-GDYGGTIVGIMKGFLGLGGA 170 (560)
Q Consensus 92 ~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~F-p~~RG~a~Gi~~~~~GLsa~ 170 (560)
+++.+|.++..++..+.. ..+ +++.+.+..++.|.+.+...........++. |++||.+.|+...+..+|.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~-----~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 144 (381)
T PRK03633 72 RSYYLASLIFAAGCAGLG-----LMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTV 144 (381)
T ss_pred HHHHHHHHHHHHHHHHHH-----Hhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999887742 222 3566666678888888877766555555555 56899999998888888887
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhH
Q 008597 171 ALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWA 250 (560)
Q Consensus 171 i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 250 (560)
+-..+...+.+..... . ..
T Consensus 145 ~g~~~~~~l~~~~~~~------------------------------------~-------------------------~~ 163 (381)
T PRK03633 145 LGQLLVSKVSTELMSV------------------------------------L-------------------------PW 163 (381)
T ss_pred HHHHHHhcccccccch------------------------------------H-------------------------HH
Confidence 7654433221100000 0 00
Q ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccccc
Q 008597 251 RIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKK 330 (560)
Q Consensus 251 ~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (560)
... ..... ..++.. .+ . + ++. . + + +
T Consensus 164 ~~~-~~~~~---~~~~~~-~~----~----------------~-~~~-~---------~--------~----------~- 188 (381)
T PRK03633 164 VTG-LVLAA---ILPLLF-TR----I----------------L-NQQ-A---------E--------N----------H- 188 (381)
T ss_pred HHH-HHHHH---HHHHHH-hc----c----------------c-CCC-C---------C--------C----------C-
Confidence 000 00000 000000 00 0 0 000 0 0 0 0
Q ss_pred ccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhh
Q 008597 331 LKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLH 410 (560)
Q Consensus 331 ~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~ 410 (560)
+ +.+.++.+|++.+|......++....-....+.+|.+.++.|.++.+.+.++++..+.+.+|++..|+++||+++
T Consensus 189 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~ 264 (381)
T PRK03633 189 D----STSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGR 264 (381)
T ss_pred C----CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCc
Confidence 0 012356788999887644332221111123345677788889988888889999999999999999999999863
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhh
Q 008597 411 RMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYV 490 (560)
Q Consensus 411 ~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~l 490 (560)
| ..+.....+..++.++.. + ....+....+.|++.+..++.....+.|....++.+..++...++..+|. .
T Consensus 265 ~------~~l~~~~~~~~~~~~~~~-~-~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~-~ 335 (381)
T PRK03633 265 L------LVLRVQVFVVILGSIAML-S-QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGS-L 335 (381)
T ss_pred H------HHHHHHHHHHHHHHHHHh-h-hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHH-H
Confidence 3 334444444444443332 1 12233455667777666666666667788887777777777777777887 4
Q ss_pred hhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 491 CSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 491 l~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
++|.+.|.+.|..+ ++..|.+.+++.+++.
T Consensus 336 igp~~~G~l~~~~g------------~~~~f~~~~~~~l~~~ 365 (381)
T PRK03633 336 LGPSFTAMLMQNYS------------DNLLFIMIASVSFIYL 365 (381)
T ss_pred HHHHHHHHHHHHhC------------ccHHHHHHHHHHHHHH
Confidence 88899999999875 8889998877765544
No 31
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.81 E-value=8.2e-18 Score=178.49 Aligned_cols=346 Identities=13% Similarity=0.075 Sum_probs=218.4
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
+..+..-|.+++++|+|.+|.+.+..+..++..+ .++.|++.||+| +|+++.++.++..++..+.
T Consensus 20 ~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g--------------~r~~~~~~~~~~~~~~~l~ 85 (382)
T PRK10091 20 FGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYS--------------LKHILLFLVALCVIGNAMF 85 (382)
T ss_pred HHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCc--------------cHHHHHHHHHHHHHHHHHH
Confidence 3445566899999999999999888888888876 678999999986 8999999999999988873
Q ss_pred HHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhH
Q 008597 109 WASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTY 187 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~f 187 (560)
+..+ ++|.+...-++.|.+.+...........+++|+ +|+.+.|+..++..+|..+-..+...+.+
T Consensus 86 -----~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~------ 152 (382)
T PRK10091 86 -----TLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ------ 152 (382)
T ss_pred -----HHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh------
Confidence 2223 356667777888898888777666677889976 68989888887777777766433222210
Q ss_pred HHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 188 LLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 188 ll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
..+....+.+...+.++..+. ..
T Consensus 153 -------------------------------------------------------~~gwr~~f~~~~~~~~~~~~~--~~ 175 (382)
T PRK10091 153 -------------------------------------------------------EFSWRYTFLLIAVFNIAVLAS--IY 175 (382)
T ss_pred -------------------------------------------------------hccHHHHHHHHHHHHHHHHHH--HH
Confidence 111111111111111111110 00
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
...| ++++ + + +. +. ....+.+|++.
T Consensus 176 ~~lp----------------------~~~~-~---------~--------~~--------~~-------~~~~~~~~~~~ 200 (382)
T PRK10091 176 FWVP----------------------DIRD-E---------A--------KG--------GL-------REQFHFLRSPA 200 (382)
T ss_pred HhCC----------------------CCCc-c---------c--------cc--------CH-------HHHHHHhcChH
Confidence 0000 0000 0 0 00 00 01145678999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
+|.++...+++........+..+++.+ ..|.++.+.+.+.++.++++.+|+++.|+++||+++| ..+.+...+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~------~~~~~~~~~ 274 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL------RIAAVTDFI 274 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch------hHHHHHHHH
Confidence 999877666654433334455566665 4699988889999999999999999999999998633 233444455
Q ss_pred HHHHHHHHh--hcCcchHHHHHHHHHhhhhcccc-chhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 427 MSVGHIVVA--SGFPGNLYVGSIIVGVCYGCQWS-LMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 427 ~~~~~lll~--~~~~~~l~~~~~l~G~~~G~~~~-l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
.+++.+++. .+.+....+..++.++++++... .....+.+.++.++.+...+ .....+|. .++|.+.|.++|.+
T Consensus 275 ~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~-~~Gp~~~G~l~~~~ 351 (382)
T PRK10091 275 IVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGG--QIAFNLGS-AIGAYCGGMMLTLG 351 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHH--HHHHHHHH-HHHHHHhHHHHHcc
Confidence 555554332 22333334444555665544332 22244556666666665432 23455666 47888899999986
Q ss_pred cCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 504 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 504 g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
++ |+..|.+.+.+++++...
T Consensus 352 ~~-----------~~~~~~~~~~~~~~~~~~ 371 (382)
T PRK10091 352 LA-----------YNYVALPAALLSFAAMSS 371 (382)
T ss_pred cC-----------cchHHHHHHHHHHHHHHH
Confidence 54 999999998777666543
No 32
>PRK10504 putative transporter; Provisional
Probab=99.80 E-value=4e-17 Score=177.62 Aligned_cols=385 Identities=10% Similarity=-0.008 Sum_probs=227.5
Q ss_pred cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHH
Q 008597 28 ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYF 106 (560)
Q Consensus 28 ~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~ 106 (560)
..+.++..-|.+.+++|+|+.+...+.....++..+ .++.|.+.||+| +|.+.+++.+...++..
T Consensus 25 ~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--------------~r~~~~~~~~~~~~~~~ 90 (471)
T PRK10504 25 DTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVG--------------VRNIFFTAIVLFTLGSL 90 (471)
T ss_pred hHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------hHHHHHHHHHHHHHHHH
Confidence 344556677889999999999988777777777655 778999999987 88888888888888887
Q ss_pred HHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCCch
Q 008597 107 LMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPS 185 (560)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~ 185 (560)
+. ...+ +.+.+....++.|.|.+...........+++|+ +||.+.|+......+++.+-..+...+.+....
T Consensus 91 ~~-----~~~~--~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw 163 (471)
T PRK10504 91 FC-----ALSG--TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASW 163 (471)
T ss_pred HH-----HHhC--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccH
Confidence 63 2222 355667777888999988888888888899985 689999998888888877766665444432222
Q ss_pred hHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccch-hHHHHHHHHHHHHhhc
Q 008597 186 TYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL-WARIITFLFLLFLLSS 264 (560)
Q Consensus 186 ~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~ 264 (560)
...+.+......++.+.... ..|... .++++.+.-...........+.... ++.....+ ...+.........+.
T Consensus 164 ~~~f~~~~~~~~l~~~~~~~--~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 238 (471)
T PRK10504 164 HWIFLINIPVGIIGAIATLM--LMPNYT-MQTRRFDLSGFLLLAVGMATLTLAL-DGSKGLGLSPLAIAGLVAVGVVAL- 238 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHH--hCCCcc-ccCCCCChHHHHHHHHHHHHHHHHH-hcCCcCCcchHHHHHHHHHHHHHH-
Confidence 22222221111222222211 112111 1111111111111111111111111 11111111 111111111011110
Q ss_pred ccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhc
Q 008597 265 PLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVC 344 (560)
Q Consensus 265 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lk 344 (560)
... .. ++ + .. . ++....+.+|
T Consensus 239 ~~~-~~----~~--~----------------~~-------------------------------~-----~~~~~~~l~~ 259 (471)
T PRK10504 239 LLY-LL----HA--R----------------NN-------------------------------N-----RALFSLKLFR 259 (471)
T ss_pred HHH-HH----HH--h----------------cC-------------------------------C-----CCccCHHHhc
Confidence 000 00 00 0 00 0 0011135889
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
|+.|+......++......+.....+.+.+. +|.++.+.+.......+...++++++|.++||+++| ..+...
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~------~~~~~~ 333 (471)
T PRK10504 260 TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR------RVLVAT 333 (471)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch------HHHHHH
Confidence 9999998777766654433333445666664 788888888888888899999999999999998643 233334
Q ss_pred HHHHHHHHHHHhh-c--C-cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 424 LATMSVGHIVVAS-G--F-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 424 ~~l~~~~~lll~~-~--~-~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
..+.+++.+++.. . . ...+.+..++.|++.|..++....++.+.+..++.+..+++.++...+|.. +++.+.|.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~i~g~l 412 (471)
T PRK10504 334 TLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMS-IGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4444444333221 1 1 112344566778888888888889999999999999999998877777763 677777777
Q ss_pred ccccc
Q 008597 500 YDNVA 504 (560)
Q Consensus 500 yD~~g 504 (560)
.|..|
T Consensus 413 l~~~g 417 (471)
T PRK10504 413 LGLFG 417 (471)
T ss_pred HHHhh
Confidence 77654
No 33
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.80 E-value=8.5e-18 Score=176.31 Aligned_cols=377 Identities=15% Similarity=0.146 Sum_probs=250.1
Q ss_pred HHHHHHHHHHH-HhcCcccccccccHHHHhhcCCChhhhhHH-HHHHhhhhhhhhhHHHHHhhccccccccccccccCCc
Q 008597 13 WIATVASIWIQ-CCSGATYTFGIYSSTLKSSQNYDQSTLDTV-SVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGP 90 (560)
Q Consensus 13 w~~l~~~~~i~-~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i-~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp 90 (560)
+..|..+++.. +|--.=+.||.-.+.+++.+|+|..|...+ ++..-.|..+=++.|++.||+| |
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfG--------------g 78 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFG--------------G 78 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccC--------------c
Confidence 44444444443 444455667777799999999999999944 4555556666889999999987 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhH
Q 008597 91 WVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGG 169 (560)
Q Consensus 91 ~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa 169 (560)
|.+..++.++..+=.+.+.. .... +++|.+...+++.|.+.+ .+...+....+|||+ ++|+|.||-- ..-+|.
T Consensus 79 R~~~~~s~~l~~IP~~~~~~--a~~~--~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~ 152 (417)
T COG2223 79 RKWTILSMLLLLIPCLGLAF--AVTY--PSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGV 152 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHH--HccC--CchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccH
Confidence 88888888776655544322 3322 346888889998888754 456778888999985 7999999976 556666
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchh
Q 008597 170 AALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLW 249 (560)
Q Consensus 170 ~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 249 (560)
++...+ .|..+...+.-.-| .+..+|+..
T Consensus 153 av~q~~------------------~P~v~~~~g~~~w~--------------------~~~~i~~~~------------- 181 (417)
T COG2223 153 AVAQLV------------------APLVAVAFGFLAWR--------------------NVAGIYVVA------------- 181 (417)
T ss_pred HHHHHH------------------HHHHHHHHhhHHHH--------------------HHHHHHHHH-------------
Confidence 666422 23333211100000 000111110
Q ss_pred HHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccc
Q 008597 250 ARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDK 329 (560)
Q Consensus 250 ~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (560)
.++..+..-+. . . |.|+. .+ .. ++.
T Consensus 182 -------l~v~~v~~~~~--~----~-----------------d~p~~----------r~-------~~--------~~~ 206 (417)
T COG2223 182 -------LAIAAVLAWLG--M----N-----------------DVPEH----------RA-------SV--------KPQ 206 (417)
T ss_pred -------HHHHHHHHHHH--h----C-----------------CChhh----------hc-------cc--------ccc
Confidence 00000000000 0 0 00100 00 00 000
Q ss_pred cccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhh
Q 008597 330 KLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIV 408 (560)
Q Consensus 330 ~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~ 408 (560)
. +..++...|+++-|.+.+.++...|+-..+.+.++.+.++. |.++.+++...+.+.+.+.+-|..+|++|||+
T Consensus 207 ~-----~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~ 281 (417)
T COG2223 207 L-----PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI 281 (417)
T ss_pred c-----hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc
Confidence 0 02346688899999999999988888888889999999865 99999999999999999999999999999999
Q ss_pred hhhcCCCchHHHHHHHHHHHHHHHHHhhc-------Cc-c----hHHHHHHHHHhhhhccccchhhHHHHhccCCchhhh
Q 008597 409 LHRMGWERPSFIAITLATMSVGHIVVASG-------FP-G----NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTI 476 (560)
Q Consensus 409 ~~~~~~~R~~~l~~~~~l~~~~~lll~~~-------~~-~----~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~ 476 (560)
+ +|+.++. .+..++++...+... .+ . .+....+..|++.|+.+-..|.+-.+ +.|..
T Consensus 282 G-----g~rv~~~-~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-----~~G~v 350 (417)
T COG2223 282 G-----GRRVTLA-VFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-----ETGAV 350 (417)
T ss_pred c-----chhHHHH-HHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-----hhhHH
Confidence 7 4445443 344444444332211 11 1 12233566788999999999987765 88899
Q ss_pred hhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008597 477 FNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 543 (560)
Q Consensus 477 yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r 543 (560)
-|++.....+|++ +=|...|..+|.+|+ |...|++....++++.++...++.|.|
T Consensus 351 ~G~vga~G~lGGf-~lp~~~g~~~~~tg~-----------~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 351 TGIVGAIGGLGGF-FLPLAFGVSLDLTGS-----------YTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred HHHHHHhcccccc-chhHHHHHHHHhccc-----------HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999986 447889999999885 999999999999888876666655543
No 34
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.80 E-value=1.6e-17 Score=170.44 Aligned_cols=332 Identities=19% Similarity=0.170 Sum_probs=251.4
Q ss_pred cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHH
Q 008597 28 ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYF 106 (560)
Q Consensus 28 ~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~ 106 (560)
..+.++.+.+.+.+++|.++++.+.+.....++..+ .++.|.+.||+| +|+.+.++.+...++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g--------------~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 14 DRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFG--------------RRRVLLLGLLLFALGSL 79 (352)
T ss_pred hhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhC--------------CchhhHHHHHHHHHHHH
Confidence 355677777889999999999999888888888876 788999999986 88899999999999998
Q ss_pred HHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCCch
Q 008597 107 LMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPS 185 (560)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~ 185 (560)
+..+. + +++.+....++.|.+.+..+.+......+++|+ +|+++.|+.....++|+.+-..+...+.+.+..
T Consensus 80 ~~~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 152 (352)
T cd06174 80 LLAFA-----S--SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGW 152 (352)
T ss_pred HHHHh-----c--cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 86444 2 356677778888999999999999999999986 899999999999999888875444333210000
Q ss_pred hHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcc
Q 008597 186 TYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSP 265 (560)
Q Consensus 186 ~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p 265 (560)
...+.+.....++..+..
T Consensus 153 -------------------------------------------------------------~~~~~~~~~~~~~~~~~~- 170 (352)
T cd06174 153 -------------------------------------------------------------RWLFLILAILGLLLALLL- 170 (352)
T ss_pred -------------------------------------------------------------HHHHHHHHHHHHHHHHHH-
Confidence 000000000000000000
Q ss_pred cccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcC
Q 008597 266 LGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCT 345 (560)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt 345 (560)
.. - +
T Consensus 171 ---~~----------------------------------------------------------~-~-------------- 174 (352)
T cd06174 171 ---LF----------------------------------------------------------L-L-------------- 174 (352)
T ss_pred ---HH----------------------------------------------------------H-H--------------
Confidence 00 0 0
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
|++|.+.+..++............+++.++. |.++.+.+...++..+.+.++++++|+++||+++|+. .+....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~ 249 (352)
T cd06174 175 RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRL-----LLLIGL 249 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHH
Confidence 6788888877777776667777888888776 8888888999999999999999999999999964321 444455
Q ss_pred HHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 425 ATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 425 ~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
.+..++.+.... ++...+++..++.|++.+..+...+..+.|.+..++.++.+|+......+|.. +++.+.|.++|..
T Consensus 250 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~i~g~l~~~~ 328 (352)
T cd06174 250 LLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA-LGPLLAGLLLDTG 328 (352)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccc
Confidence 555566554443 33456777889999999999999999999999999999999999888888884 7889999999965
Q ss_pred cCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 504 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 504 g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
+ |+..|.+.+++++++.++..
T Consensus 329 ~------------~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 329 G------------YGGVFLILAALALLAALLLL 349 (352)
T ss_pred C------------cchHHHHHHHHHHHHHHHhe
Confidence 4 89999999999888876543
No 35
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.80 E-value=1.2e-17 Score=177.26 Aligned_cols=351 Identities=13% Similarity=0.031 Sum_probs=219.1
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
+.|+..-|++++++|+|.+|+..+..+..+|..+ .++.|++.||+| +|+++. +++...+.-.+.
T Consensus 8 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~g--------------rr~~~~-~~~~~~~~~~~~ 72 (368)
T TIGR00903 8 VTFSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAF--------------KRWFLF-GSLATFAAAAGR 72 (368)
T ss_pred HHHHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------------chHHHH-HHHHHHHHHHHH
Confidence 4567777999999999999999888887787765 788999999986 666554 444333322211
Q ss_pred HHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhH
Q 008597 109 WASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTY 187 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~f 187 (560)
.... ++++.+...-++.|.|.+. +.++.....+||| ++||+++|+...+..+|+.+-..+...+-+
T Consensus 73 --~~~~----~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~------ 139 (368)
T TIGR00903 73 --LLDP----FNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT------ 139 (368)
T ss_pred --HHHh----ccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 1111 2366677777888999885 5566666688887 689999999999999998887533322210
Q ss_pred HHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 188 LLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 188 ll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
..+.+..+.+.+.+.++..+.. .
T Consensus 140 -------------------------------------------------------~~gWr~~f~~~~~l~~~~~~~~--~ 162 (368)
T TIGR00903 140 -------------------------------------------------------AGGLQLLIIPIAAVAAAGIILV--L 162 (368)
T ss_pred -------------------------------------------------------ccchHHHHHHHHHHHHHHHHHH--H
Confidence 1111111111111111111000 0
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
...| | +|+. .+ +. .+ .+ +.. ..+++.+|+++
T Consensus 163 ~~lp----~-----------------~p~~-~~---------~~------~~--------~~--~~~--~~~~~ll~~~~ 193 (368)
T TIGR00903 163 AALP----A-----------------LPFQ-AA---------EG------FG--------FK--DAV--KEFGALAGRKD 193 (368)
T ss_pred HHcC----C-----------------CCCC-CC---------CC------cc--------hH--HHH--HHHHHHHcChh
Confidence 0010 0 0000 00 00 00 00 000 13578999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
+|.+++.+++....-..+.+++|++.++.|++.+ ++...++..+...+| .++++||..||. .|+........+.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~--~r~~~~~~~~~~~ 267 (368)
T TIGR00903 194 LWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAG--LRSIYIRAAALLI 267 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhh--hHHHHHHHHHHHH
Confidence 9999999998888877888899999998888754 555555656555555 589999987653 2333333233333
Q ss_pred HHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCC
Q 008597 428 SVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 506 (560)
Q Consensus 428 ~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~ 506 (560)
++..+++.. +++........+.|++.+..++....+.+|.+..++.|+..|+.....-+|+. .+|++.|.+.. +
T Consensus 268 a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~-~~~~~~~~~~~--~-- 342 (368)
T TIGR00903 268 AAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISV-ALALAAMLFIS--S-- 342 (368)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHH-HHHHHHHHHhc--C--
Confidence 444333332 22333344445566667767777778899999999999999999887777774 56667776653 2
Q ss_pred CCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 507 EGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 507 ~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
.+..|.+.++.++++.+..
T Consensus 343 ----------~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 343 ----------AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred ----------HHHHHHHHHHHHHHHHHHH
Confidence 6678888888887777654
No 36
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.80 E-value=1.5e-17 Score=181.80 Aligned_cols=413 Identities=11% Similarity=0.040 Sum_probs=244.6
Q ss_pred hhhhchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccc
Q 008597 6 RLNLKSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTR 83 (560)
Q Consensus 6 ~~~~~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~ 83 (560)
+...+++|..+....+.....+. .+..+...+++++++|+|+.+.+.+.....++..+ .++.|.+.||+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-------- 83 (496)
T PRK03893 12 RHLNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYG-------- 83 (496)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 33345667755555555444333 33555667999999999999999777777777766 788999999986
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehh
Q 008597 84 FSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMK 162 (560)
Q Consensus 84 ~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~ 162 (560)
+|.+++++.++..++..++... . +++.+....++.|.+.+..+.+......++||+ +||.+.|+..
T Consensus 84 ------~r~~~~~~~~~~~~~~~~~~~~-----~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 150 (496)
T PRK03893 84 ------RRLAMVISIVLFSVGTLACGFA-----P--GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLI 150 (496)
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHH-----h--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 8889999999999988875332 2 356677777888999988888888888999975 6999999999
Q ss_pred hhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCC---Cc-ccc-chhh-hh--------HHHH
Q 008597 163 GFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNS---AD-DKK-HLNA-FS--------AVAL 228 (560)
Q Consensus 163 ~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~---~~-~~~-~~~~-~~--------~~~~ 228 (560)
.+..+|+.+-..+...+.+.-.....++++..+..+.++. .+..|... .+ +++ .... .. ....
T Consensus 151 ~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (496)
T PRK03893 151 SGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFALWL---RKNLPEAEDWKEKHAGKAPVRTMVDILYRGEHRIINI 227 (496)
T ss_pred HHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHH---HHhCCCchhhhhhccccccchhHHHHHhcchhHHHHH
Confidence 9999998887777766654333333344444444443322 22222221 01 000 0000 00 0000
Q ss_pred H--HHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCC
Q 008597 229 T--IAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSAS 306 (560)
Q Consensus 229 ~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (560)
. .............. ....... ....+...........
T Consensus 228 ~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~------------------------------------ 267 (496)
T PRK03893 228 LLTLAAAAALWFCFAGN-LQNAAIV---AVLGLLCAAIFISFMV------------------------------------ 267 (496)
T ss_pred HHHHHHHHHHHHHHHhh-hcchhHH---HHHHHHHHHHHHHHHH------------------------------------
Confidence 0 00000000000000 0000000 0000000000000000
Q ss_pred CCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhH
Q 008597 307 QDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINS 385 (560)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~ 385 (560)
+.+ . .+.+.++.+....++....+......++.+.+ ++|+++.+++.
T Consensus 268 ---------------------~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~ 315 (496)
T PRK03893 268 ---------------------QSS---G--------KRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVAN 315 (496)
T ss_pred ---------------------Hhc---c--------cchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHH
Confidence 000 0 01223444444444443334445567888885 78999999999
Q ss_pred HHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcc--hHHHHHHHHHhhhhccccchhh
Q 008597 386 LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPG--NLYVGSIIVGVCYGCQWSLMPT 462 (560)
Q Consensus 386 lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~--~l~~~~~l~G~~~G~~~~l~p~ 462 (560)
+.+...++..+|+++.|+++||+++| ..+.+...+..+..++.. ..... .+.....+.++...+...+.|.
T Consensus 316 ~~~~~~~~~~~g~~~~g~l~dr~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (496)
T PRK03893 316 VLFFSGFGAAVGCCVGGFLGDWLGTR------KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPK 389 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcch------HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHH
Confidence 99999999999999999999998643 223333333333332221 21111 1222233334433445678899
Q ss_pred HHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 463 ITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 463 i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
++.|.++.++.|+.+|+......+|.. ++|.+.|.+.|+.| |+.++...++.+.+..+
T Consensus 390 ~~~~~~~~~~~g~~~~~~~~~~~~g~~-lgp~l~g~l~~~~g------------~~~~~~~~~~~~~~~~~ 447 (496)
T PRK03893 390 LIGGYFDTEQRAAGLGFTYNVGALGGA-LAPILGALIAQRLD------------LGTALASLSFSLTFVVI 447 (496)
T ss_pred HHHhhCCHHHhhcccchhhhhhhHHHH-HHHHHHHHHhccCC------------hHHHHHHHHHHHHHHHH
Confidence 999999999999999998777777774 78889999999876 78787666655544443
No 37
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.79 E-value=3.8e-17 Score=174.67 Aligned_cols=365 Identities=8% Similarity=0.058 Sum_probs=230.5
Q ss_pred hchhHHHHHHHHHHHHhcC-cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccc
Q 008597 9 LKSKWIATVASIWIQCCSG-ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSF 86 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~~~~G-~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~ 86 (560)
.+.-|..+........+.+ ..|.-.-.-+++.+++|+|.+|...+..+..++..+ .++.|.+.||+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g----------- 83 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATD----------- 83 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-----------
Confidence 3445776555555543333 344444466889999999999999666555566654 778899999876
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhh
Q 008597 87 LRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFL 165 (560)
Q Consensus 87 ~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~ 165 (560)
+|.++.++.++..++..+. ...+ ++|.+...-++.|.+.+.....+...+.++|| ++||.+.|+..++.
T Consensus 84 ---rr~~~~~~~~~~~~~~~~~-----~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~ 153 (394)
T PRK10213 84 ---RRYVVILFAVLLTLSCLLV-----SFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAV 153 (394)
T ss_pred ---cHHHHHHHHHHHHHHHHHH-----HHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHH
Confidence 8999999999999988773 2222 36677777788899999888888888899997 57999999999998
Q ss_pred hhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccc
Q 008597 166 GLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFT 245 (560)
Q Consensus 166 GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 245 (560)
++|..+-..+...+.+ ..+
T Consensus 154 ~~g~~ig~~l~~~l~~-------------------------------------------------------------~~g 172 (394)
T PRK10213 154 SIALVIAAPLGSFLGE-------------------------------------------------------------LIG 172 (394)
T ss_pred HHHHHHHHHHHHHHHh-------------------------------------------------------------hcC
Confidence 8887766543332211 011
Q ss_pred cchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccc
Q 008597 246 FPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAE 325 (560)
Q Consensus 246 ~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (560)
....+.....+..+.++. .....| +++. + + +
T Consensus 173 w~~~f~~~~~l~~~~~l~--~~~~~p----------------------~~~~-----------~-~------~------- 203 (394)
T PRK10213 173 WRNVFNAAAVMGVLCIFW--IIKSLP----------------------SLPG-----------E-P------S------- 203 (394)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHCC----------------------CCCc-----------c-c------c-------
Confidence 111111110000000000 000000 0000 0 0 0
Q ss_pred cccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHH-HHHHcCCCCcchhHHHHHHHHhhhhhccccccc
Q 008597 326 FDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQ-IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYV 404 (560)
Q Consensus 326 ~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~-i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~l 404 (560)
+ . ..+.++.+|+|.+|.+.+..++............++ +.+++|+++++.+...+..++++.+|++++|++
T Consensus 204 ---~---~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l 275 (394)
T PRK10213 204 ---H---Q--KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFI 275 (394)
T ss_pred ---c---c--hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 012367889999998866655544433344455544 556779998888888999999999999999999
Q ss_pred hhhhhhhcCCCchHHHHHHHHHHHHHHHHH-hhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 405 SDIVLHRMGWERPSFIAITLATMSVGHIVV-ASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 405 sD~~~~~~~~~R~~~l~~~~~l~~~~~lll-~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
.||.. |+..+..........+++. ..+++..+.+..++.|++++......+..+.+... ++.+...++....
T Consensus 276 ~~r~~------~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 348 (394)
T PRK10213 276 LKRSV------KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAV 348 (394)
T ss_pred Hhccc------hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHH
Confidence 88842 2222222222222223222 22344556667888999999888888877777664 5566666655444
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
..+|. .+|+.++|.++|+.| ++..+..+++++++..
T Consensus 349 ~~lg~-~~G~~l~G~l~~~~g------------~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 349 IQLAN-TCGAAIGGYALDNIG------------LTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHH-HHHHHHHHHHHhccC------------hhhHHHHHHHHHHHHH
Confidence 55555 367788999999876 7777777776554443
No 38
>PRK12382 putative transporter; Provisional
Probab=99.79 E-value=4.2e-17 Score=173.10 Aligned_cols=350 Identities=12% Similarity=0.059 Sum_probs=214.3
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
...++....+++++|+|.+|+..+..+..++..+ .++.|.+.||+| +|+++++|.+...++....
T Consensus 33 ~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g--------------~r~~l~~~~~~~~~~~~~~ 98 (392)
T PRK12382 33 LPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYG--------------AKRSALQGMLACGLAGLAY 98 (392)
T ss_pred HHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhc--------------chHHHHHHHHHHHHHHHHH
Confidence 3344555568899999999999777777777766 789999999987 8889998887776654432
Q ss_pred HHHH-hccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchh
Q 008597 109 WASV-VGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPST 186 (560)
Q Consensus 109 ~l~~-~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~ 186 (560)
.+.. .......+++.+...-++.|.|.+...++......+++| ++||.+.|+.-.+..++..+-..+...+.+
T Consensus 99 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~----- 173 (392)
T PRK12382 99 LLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS----- 173 (392)
T ss_pred HhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 1111 111111235566667788899999888888888888886 689999998766666655554322211100
Q ss_pred HHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccc
Q 008597 187 YLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPL 266 (560)
Q Consensus 187 fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~ 266 (560)
..+. +..+.+..++.+. .+
T Consensus 174 --------------------------------------------------------~~g~----~~~~~~~~~~~~~-~~ 192 (392)
T PRK12382 174 --------------------------------------------------------HFGF----AALALTTMVLPLL-AW 192 (392)
T ss_pred --------------------------------------------------------ccCh----HHHHHHHHHHHHH-HH
Confidence 0000 0000000000000 00
Q ss_pred ccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcCh
Q 008597 267 GIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTL 346 (560)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~ 346 (560)
. ..+ + . ++.+. + + + ++ .+.++.+|
T Consensus 193 ~-~~~----~---~--------------~~~~~---------~-~------~----------~~------~~~~~~~~-- 216 (392)
T PRK12382 193 A-FNG----T---V--------------RKVPA---------H-A------G----------ER------PSLWSVVG-- 216 (392)
T ss_pred H-HHH----h---c--------------cCCCC---------C-c------c----------cC------chHHHHHH--
Confidence 0 000 0 0 00000 0 0 0 00 00112221
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
.+|...+..++......++....+.+.++.|.++ .....+..++.+.++++.+|+++||+++|+ . +.....+
T Consensus 217 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-----~-~~~~~~~ 288 (392)
T PRK12382 217 LIWKPGLGLALQGVGFAVIGTFVSLYFASKGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-----V-AIVSLLV 288 (392)
T ss_pred HHHHhHHHHHHHHHHHhHHHHHHHHHHHhcCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-----e-hHHHHHH
Confidence 2232222111111111123345566667766653 455667888899999999999999987543 2 2233344
Q ss_pred HHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 427 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 427 ~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
.+++.+++. .++...+++..++.|+++|..+...+..+.|.++.|+.|+.+|+......+|. .+++.+.|.+.|..|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~ig~~~~g~l~~~~g- 366 (392)
T PRK12382 289 ETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAY-GVSGPLAGMLATSFG- 366 (392)
T ss_pred HHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhC-
Confidence 445544433 23334455677888999998888888889999999999999999988878877 478889999999876
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
|+..|.+.+++.+++.++.+
T Consensus 367 -----------~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 367 -----------YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred -----------chHHHHHHHHHHHHHHHHHH
Confidence 99999999988888876654
No 39
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.79 E-value=2.4e-17 Score=179.15 Aligned_cols=381 Identities=13% Similarity=0.061 Sum_probs=238.2
Q ss_pred cccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHH
Q 008597 32 FGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWA 110 (560)
Q Consensus 32 fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l 110 (560)
.+...|.+.+++|.+.++...+.....++..+ .++.|.+.||+| +|.++++|.++..++..+.
T Consensus 21 ~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--------------~r~~~~~~~~~~~~~~~~~-- 84 (485)
T TIGR00711 21 VNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFG--------------TRRLFLISTFAFTLGSLLC-- 84 (485)
T ss_pred HHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhC--------------cHHHHHHHHHHHHHHHHHH--
Confidence 44667999999999999999888888888876 677999999986 8999999999999998874
Q ss_pred HHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHH
Q 008597 111 SVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLL 189 (560)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll 189 (560)
...+ +++.+...-++.|.+.+...........+++| ++||.+.|+......+|+.+-..+...+.+.......+
T Consensus 85 ---~~~~--~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f 159 (485)
T TIGR00711 85 ---GVAP--NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIF 159 (485)
T ss_pred ---hCcC--CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehh
Confidence 3323 35667777888999999999988888999997 68999999999999988887766655554432222322
Q ss_pred HH-HHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhc-ccccchhHHHHHHHHHHHHhhcccc
Q 008597 190 IL-ALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILEN-IFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 190 ~l-a~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
+. +.......++...+.+. +.+.+++..+...........-.+.....++ ..+......+........+.....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 235 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPR---DKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAF- 235 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCC---ccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHH-
Confidence 22 22222222222222222 1111111111111110000000000000000 000000001000000000000000
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
.. + +..++ +.....+.+|+++
T Consensus 236 -~~----~-------------------------------------------------~~~~~-----~~~~~~~~~~~~~ 256 (485)
T TIGR00711 236 -VV----W-------------------------------------------------ELTDD-----NPLVDLRLFKYRN 256 (485)
T ss_pred -HH----H-------------------------------------------------HHcCC-----CCccCHHHHcCCC
Confidence 00 0 00000 0112257889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
||...+..++...........++.+.++ .|+++.+++...+..++...++++++|++.||+++ +..+.+...+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~------~~~~~~g~~~ 330 (485)
T TIGR00711 257 FTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDP------RKLVTIGLIL 330 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc------HHHHHHHHHH
Confidence 9998777766655555556677888876 59998888889999999999999999999999853 3344455556
Q ss_pred HHHHHHHHh--h--c-CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 427 MSVGHIVVA--S--G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 427 ~~~~~lll~--~--~-~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
.+++.+++. . + ....+....++.|++.|..+........+.++.++.+...|+..+...+|.. +++.+.|.++|
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~-ig~~i~g~~~~ 409 (485)
T TIGR00711 331 YAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGS-IGTALITTILT 409 (485)
T ss_pred HHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 666665443 1 1 1233555678889999988877777777889999999999999777777773 67777888777
Q ss_pred cc
Q 008597 502 NV 503 (560)
Q Consensus 502 ~~ 503 (560)
+.
T Consensus 410 ~~ 411 (485)
T TIGR00711 410 NR 411 (485)
T ss_pred HH
Confidence 43
No 40
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.79 E-value=3e-17 Score=178.49 Aligned_cols=410 Identities=11% Similarity=0.085 Sum_probs=221.4
Q ss_pred cccccccc---HHHHhhc--------CCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHH
Q 008597 29 TYTFGIYS---STLKSSQ--------NYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLT 96 (560)
Q Consensus 29 ~Y~fs~ys---~~l~~~~--------~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~ 96 (560)
.|..++++ +.+++.+ +++..+...+.....+|..+ .++.|.+.||+| +|+++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~G--------------rr~~~~~ 90 (479)
T PRK10077 25 GYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFG--------------RRDSLKI 90 (479)
T ss_pred CcccceehHhHHHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------cHHHHHH
Confidence 34444444 4466666 88888888888888888876 788999999987 8999999
Q ss_pred HHHHHHHHHHHHHHHHh---ccC-CCCc-HHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHH
Q 008597 97 GAILCFAGYFLMWASVV---GLI-HSPP-VPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGA 170 (560)
Q Consensus 97 g~~~~~~G~~~~~l~~~---~~~-~~~~-~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~ 170 (560)
+.+++.++.++..+... ... .+.+ ++.+..+-++.|.+.+..+..+.....+++| ++||.+.|+...+..+|..
T Consensus 91 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~ 170 (479)
T PRK10077 91 AAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL 170 (479)
T ss_pred HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH
Confidence 99999888877543210 000 1111 3445567799999999999999999999998 5699999999888888877
Q ss_pred HHHHHHHHhcCC-------C-chhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhc
Q 008597 171 ALIQAYDTIWKG-------R-PSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILEN 242 (560)
Q Consensus 171 i~s~i~~~~f~~-------~-~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 242 (560)
+-..+...+.+. + .....+.+...+.++.++..++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~------------------------------------- 213 (479)
T PRK10077 171 VVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYF------------------------------------- 213 (479)
T ss_pred HHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHc-------------------------------------
Confidence 653222111000 0 0011111111111111110000
Q ss_pred ccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccc
Q 008597 243 IFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQV 322 (560)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (560)
.|.. .+....++. . ++.+... +.... +.+.
T Consensus 214 ---------------------------l~~s-~~~l~~~~~-----~---~~~~~~~---------~~~~~--~~~~--- 243 (479)
T PRK10077 214 ---------------------------VPET-PRYLMSRGK-----Q---EQAEGIL---------RKIMG--NTLA--- 243 (479)
T ss_pred ---------------------------CCCC-cHHHHHcCC-----H---HHHHHHH---------HHHcC--ChhH---
Confidence 1100 000000000 0 0000000 00000 0000
Q ss_pred ccccccc-cccccccCcHHHHhcChhHHHHHHHHH---Hhhhhhh-hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhh
Q 008597 323 KAEFDDK-KLKDEEDMNILQSVCTLNFWLLFVAML---CGMGSGL-ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLG 397 (560)
Q Consensus 323 ~~~~~~~-~~~~~~~~t~~~~lkt~~Fwll~~~~~---~~~g~gl-~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~G 397 (560)
.+..++. +....+....+..+. .....+..... +....+. .+....+.+.++.|.+...........++.+.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~ 322 (479)
T PRK10077 244 TQALQEIKHSLDHGRKTGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGASTDIALLQTIIVGVINLTF 322 (479)
T ss_pred HHHHHHHHHHHHHhhhhhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHH
Confidence 0000000 000000000011111 00011111111 1111111 2234557777888988776666667889999999
Q ss_pred ccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh----cCcc-hHHHHHHHHHhhhhccc-cchhhHHHHhccCC
Q 008597 398 RFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS----GFPG-NLYVGSIIVGVCYGCQW-SLMPTITYEIFGVG 471 (560)
Q Consensus 398 Rl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~----~~~~-~l~~~~~l~G~~~G~~~-~l~p~i~~e~FG~k 471 (560)
.+++|+++||+++ +..+.....+++++.+.+.. +... ....+.++.+.+++..+ ++.+.+++|.|+.+
T Consensus 323 ~~~~g~l~dr~g~------r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~ 396 (479)
T PRK10077 323 TVLAIMTVDKFGR------KPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNA 396 (479)
T ss_pred HHHHHHHHHHhcC------hHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChh
Confidence 9999999999853 34445555555665544321 1111 22334455555555433 56778999999999
Q ss_pred chhhhhhHHHhhhhhHHhhhh----hhhh--hhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008597 472 HMGTIFNTIAIASPVGSYVCS----VRII--GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRF 545 (560)
Q Consensus 472 ~~g~~yG~~~~a~~~g~~ll~----~~l~--G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~ 545 (560)
++++..|+......+|.. .+ |.+. |++.|..+ +..+|++.++++++++++..++..++|+.
T Consensus 397 ~r~~~~g~~~~~~~~g~~-~~~~~~p~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 463 (479)
T PRK10077 397 IRGKALAIAVAAQWIANY-FVSWTFPMMDKNSWLVAHFH------------NGFSYWIYGCMGVLAALFMWKFVPETKGK 463 (479)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhHHHHhccchhhhcc------------CccHHHHHHHHHHHHHHHHHhccccCCCC
Confidence 999999998665555543 22 3333 45555543 56778888888888777666665556655
Q ss_pred hHHHHHHhhcCCCC
Q 008597 546 YKQVVLRRLGHSSR 559 (560)
Q Consensus 546 ~~~~~~~~~~~~~~ 559 (560)
-.++.++..++.+|
T Consensus 464 ~~~~~~~~~~~~~~ 477 (479)
T PRK10077 464 TLEEMEALWEPETK 477 (479)
T ss_pred CHHHHHHHHhhccc
Confidence 55565666555443
No 41
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.79 E-value=7e-18 Score=180.81 Aligned_cols=376 Identities=11% Similarity=-0.010 Sum_probs=234.3
Q ss_pred ccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHH
Q 008597 33 GIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWAS 111 (560)
Q Consensus 33 s~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~ 111 (560)
..+-+.+.++++.+..+...+.....++..+ .++.|.+.||+| +|+++.++.++.++++.+....
T Consensus 37 ~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g--------------~~~~l~~~~~~~~~~~~~~~~~ 102 (417)
T PRK10489 37 GVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYD--------------RKKLILLARGTCGLGFIGLALN 102 (417)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcC--------------CceEEEehHHHHHHHHHHHHHH
Confidence 4455777778888998988888888788766 678899999986 7778888888888877664322
Q ss_pred HhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHH
Q 008597 112 VVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLI 190 (560)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~ 190 (560)
......+++.+....++.|.+.+....+......+++|+ +|+.+.|+.....++|..+-..+...+.+.
T Consensus 103 --~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-------- 172 (417)
T PRK10489 103 --AFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAA-------- 172 (417)
T ss_pred --HHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH--------
Confidence 111223455666666777888877777777778899974 689999998877777776654333322110
Q ss_pred HHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccc
Q 008597 191 LALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAI 270 (560)
Q Consensus 191 la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~ 270 (560)
.+.+ ..+ ... .+.+++ ..+.++..|
T Consensus 173 ------------------~~~~--------~~~-~~~--~~~~~~---------------------~~~~~~~l~----- 197 (417)
T PRK10489 173 ------------------GGVA--------WNY-GLA--AAGTFI---------------------TLLPLLRLP----- 197 (417)
T ss_pred ------------------HhhH--------HHH-HHH--HHHHHH---------------------HHHHHHhCC-----
Confidence 0000 000 000 000000 000001100
Q ss_pred ccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHH
Q 008597 271 KAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWL 350 (560)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwl 350 (560)
+ .+++.. ++ + + +.+.....++..+|++.+|.
T Consensus 198 -----~-----------------~~~~~~--------~~-~------~------------~~~~~~~~~~~~~~~~~~~~ 228 (417)
T PRK10489 198 -----A-----------------LPPPPQ--------PR-E------H------------PLRSLLAGFRFLLASPVVGG 228 (417)
T ss_pred -----C-----------------CCCCCc--------cc-c------c------------chHHHHHHHHHHHcChHHHH
Confidence 0 000000 00 0 0 00000012456788999887
Q ss_pred HHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHH
Q 008597 351 LFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSV 429 (560)
Q Consensus 351 l~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~ 429 (560)
+.+..++.... ..+....+.+.++ +|.++...+.+.++.+++..+|++++|+++||.. ++..+.....+.++
T Consensus 229 ~~~~~~~~~~~-~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~------~~~~l~~~~~~~~~ 301 (417)
T PRK10489 229 IALLGGLLTMA-SAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSAR------PGLLMLLSTLGSFL 301 (417)
T ss_pred HHHHHHHHHHH-HhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccC------cchHHHHHHHHHHH
Confidence 66544433222 2344567778877 7998888888889999999999999999998742 12233344445555
Q ss_pred HHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCC
Q 008597 430 GHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEG 508 (560)
Q Consensus 430 ~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~ 508 (560)
+.+++.. ++.....+..++.|++.+...+...+++.|.+..++.|..+|+......+|. .+++.+.|.+.|..+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~-~~g~~l~G~l~~~~g---- 376 (417)
T PRK10489 302 AVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGD-AIGAALLGGLGAMMT---- 376 (417)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhH-hHHHHHHHHHHHHhc----
Confidence 5544432 2233445566777887777666677888999998999999999977777776 478889999999876
Q ss_pred CcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhcC
Q 008597 509 NSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGH 556 (560)
Q Consensus 509 ~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~~~~~ 556 (560)
++.++.+.+++.++..++......++|+.-+++.++.-+|
T Consensus 377 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (417)
T PRK10489 377 --------PVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDASD 416 (417)
T ss_pred --------hhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCC
Confidence 6777877776665555455444556666666666655444
No 42
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.78 E-value=2e-17 Score=189.10 Aligned_cols=431 Identities=12% Similarity=0.030 Sum_probs=255.0
Q ss_pred chhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccccc
Q 008597 10 KSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFL 87 (560)
Q Consensus 10 ~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~ 87 (560)
+.+|.+++...+..+..|. ....+...+.+++.++++..+.+.+..+..+|..+ .++.|++.||+|
T Consensus 163 ~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~G------------ 230 (742)
T TIGR01299 163 RFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLG------------ 230 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 4567776666666665554 23356667899999999999999888888888877 678999999987
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhh
Q 008597 88 RGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLG 166 (560)
Q Consensus 88 ~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~G 166 (560)
+|.+++++.++..++.++.. ..+ +++.+++.-++.|+|.+.....+......++| ++||.+.|+..++..
T Consensus 231 --RR~~lii~lil~~i~~ll~a-----fa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~ 301 (742)
T TIGR01299 231 --RKQCLLICLSVNGFFAFFSS-----FVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWM 301 (742)
T ss_pred --cHHHHHHHHHHHHHHHHHHH-----HHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 88899999888888777643 222 35667777888999999989888888899998 579999999999999
Q ss_pred hhHHHHHHHHHHhcC-------------CCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHH
Q 008597 167 LGGAALIQAYDTIWK-------------GRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAY 233 (560)
Q Consensus 167 Lsa~i~s~i~~~~f~-------------~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (560)
+|+++...+...+.+ ......++.+...|.+++++..+++..-|. |
T Consensus 302 iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPr---------------------w 360 (742)
T TIGR01299 302 IGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPR---------------------F 360 (742)
T ss_pred HHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHH---------------------H
Confidence 988887655433321 112344455555566665555444422111 1
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcc-cc
Q 008597 234 LMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSV-AY 312 (560)
Q Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 312 (560)
++ ..-......+++- +. .+.+.... ..+. + .-....-+..+..++. +.
T Consensus 361 L~------~~gr~~eA~~iL~----------------~i--~~~n~~~~-----~~~~-~-~~~~~~~~~~~~~~~~~~~ 409 (742)
T TIGR01299 361 FL------ENGKHDEAWMILK----------------LI--HDTNMRAK-----GHPE-K-VFSVNHIKTIHQEDELIEI 409 (742)
T ss_pred HH------HCCCHHHHHHHHH----------------HH--hcCCCCCc-----Cchh-H-HHHHHHHHHhhhhhhhhcc
Confidence 10 0000011111000 00 00000000 0000 0 0000000000000000 00
Q ss_pred cCCCCCccccccccccccccccccC----cHHHHhcCh---hHHHHHHHHHHhhhhhhhhhhcHHHHHHHc---------
Q 008597 313 HELPGEESQVKAEFDDKKLKDEEDM----NILQSVCTL---NFWLLFVAMLCGMGSGLATVNNISQIGESL--------- 376 (560)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~----t~~~~lkt~---~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l--------- 376 (560)
++..... ...+.. ....... +++++++.+ ..+++|+..++..+....+..++|++.+.+
T Consensus 410 ~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~ 484 (742)
T TIGR01299 410 ESDTGTW----YQRCFV-RALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALT 484 (742)
T ss_pred cccccch----hhcchh-hhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 0000000 000000 0000001 123322221 224455555555555556677878775331
Q ss_pred ---------------------------------CCC--------------------C-----------------------
Q 008597 377 ---------------------------------GYP--------------------T----------------------- 380 (560)
Q Consensus 377 ---------------------------------G~~--------------------~----------------------- 380 (560)
|+. .
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ 564 (742)
T TIGR01299 485 KNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEY 564 (742)
T ss_pred ccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhh
Confidence 000 0
Q ss_pred -------------------------c-----chhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 008597 381 -------------------------S-----AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVG 430 (560)
Q Consensus 381 -------------------------~-----~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~ 430 (560)
. .......+.++...+|.++.|+++||++ |+..+.+.+++.+++
T Consensus 565 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~G------Rr~~l~~~~~lsai~ 638 (742)
T TIGR01299 565 KFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIG------RLRMLAGSMVLSCIS 638 (742)
T ss_pred hhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------CHHHHHHHHHHHHHH
Confidence 0 0012245677889999999999999985 445566666666666
Q ss_pred HHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCC
Q 008597 431 HIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGN 509 (560)
Q Consensus 431 ~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~ 509 (560)
++++.. .+...+++..++.|++.++.+++..++++|+|..+.+++.+|+.....-+|+. ++|.+.|.+.+..
T Consensus 639 ~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGai-igp~i~g~L~~~~------ 711 (742)
T TIGR01299 639 CFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAV-LGILIFGSFVGIT------ 711 (742)
T ss_pred HHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh------
Confidence 655443 23334555566778888888899999999999999999999999998889994 7888889888752
Q ss_pred cccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 510 SCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 510 ~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
+..+|++.+++.++++++.+++
T Consensus 712 -------~~~pf~i~a~~lll~~ll~~~L 733 (742)
T TIGR01299 712 -------KAAPILFASAALACGGLLALKL 733 (742)
T ss_pred -------hHHHHHHHHHHHHHHHHHHHhC
Confidence 4678888888887777666544
No 43
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.78 E-value=1.8e-17 Score=171.60 Aligned_cols=337 Identities=11% Similarity=0.007 Sum_probs=222.0
Q ss_pred HHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Q 008597 37 STLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGL 115 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~ 115 (560)
+.+.++.+.+..|+..+..+..++..+ .++.|.+.||+| +|+++.++.++..++..+....- .
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g--------------~r~~~~~~~~~~~~~~~~~~~~~--~ 86 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYD--------------RKKVMIGADLIRAVLVAVLPFVA--L 86 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhc--------------hhHHHHHHHHHHHHHHHHHHHHH--H
Confidence 345566788999999888888888765 788999999986 88899999888888877654332 1
Q ss_pred CCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHH
Q 008597 116 IHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALL 194 (560)
Q Consensus 116 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~ 194 (560)
....+++.+...-++.|.+.+....+......+++| ++||.+.|+.....++|..+-..+...+.+......
T Consensus 87 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~------- 159 (365)
T TIGR00900 87 LGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKW------- 159 (365)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-------
Confidence 122346677777788899999988888888899997 579999999999999998776544332211000000
Q ss_pred hHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccccccc
Q 008597 195 PTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQR 274 (560)
Q Consensus 195 ~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~ 274 (560)
. |. ......++..+.. ...+
T Consensus 160 ---------------------------~----------~~-----------------~~~~~~~~~~~~~---~~~~--- 179 (365)
T TIGR00900 160 ---------------------------A----------IW-----------------VDAVGFAISALLI---VSVR--- 179 (365)
T ss_pred ---------------------------H----------HH-----------------HHHHHHHHHHHHH---Hhcc---
Confidence 0 00 0000000000000 0000
Q ss_pred ccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHH
Q 008597 275 EDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVA 354 (560)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~ 354 (560)
.++. ++. + .++.+ ++. .++.....++.+|++.+|.+...
T Consensus 180 -~~~~---------------~~~-~-------~~~~~-----~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 218 (365)
T TIGR00900 180 -IPEL---------------AAS-E-------IQALS-----NAV------------LRDTREGIKFVLKNPLLRTLLLL 218 (365)
T ss_pred -cccC---------------CCc-c-------ccccc-----hhH------------HHHHHhHHHHHHcCcHHHHHHHH
Confidence 0000 000 0 00000 000 00001235778999999988877
Q ss_pred HHHhhhhhhhhh-hcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Q 008597 355 MLCGMGSGLATV-NNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI 432 (560)
Q Consensus 355 ~~~~~g~gl~~i-~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l 432 (560)
.++......... +..+.+.++ +|.++.+.+.+.++.++...+|+++.|+++||.++ +..+.....+.+++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~ 292 (365)
T TIGR00900 219 ALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKR------MALMTGAIFVIGLAIL 292 (365)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhch------hHHHHHHHHHHHHHHH
Confidence 766655554444 455666665 68888888888999999999999999999998753 2334444444455544
Q ss_pred HHhh-cC-cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 433 VVAS-GF-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 433 ll~~-~~-~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+... +. ...+++..++.|+++|........++.|.+..++.++.+|+......++.. +++.+.|.++|..|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~g~~~~g~l~~~~g 365 (365)
T TIGR00900 293 VVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWP-LGLILAGPLADHLG 365 (365)
T ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC
Confidence 4332 22 345566788999999999999999999999999999999999887777774 78889999999753
No 44
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.78 E-value=7e-17 Score=177.43 Aligned_cols=390 Identities=13% Similarity=0.083 Sum_probs=212.0
Q ss_pred HHHHHHHHHHHHhcCcccccccc---cHHHHhhcCCChhhh-hHHH-----HHHhhhhhh-hhhHHHHHhhccccccccc
Q 008597 13 WIATVASIWIQCCSGATYTFGIY---SSTLKSSQNYDQSTL-DTVS-----VFKDIGANV-GVLSGLLYSFATLNHHHRT 82 (560)
Q Consensus 13 w~~l~~~~~i~~~~G~~Y~fs~y---s~~l~~~~~~s~~~~-~~i~-----~~~~~g~~~-~~~~G~~~d~~g~~~~~~~ 82 (560)
|.+++.+.+....-+ |.+++| .+.+.+.++.+.++. +.++ .+..++..+ +++.|.+.||+|
T Consensus 15 ~~~~~~~~~g~~~~~--~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G------- 85 (490)
T PRK10642 15 RKAITAASLGNAMEW--FDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYG------- 85 (490)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------
Confidence 344444444444433 555554 477788886554332 2222 222244444 677888888876
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCc---H---HHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCc
Q 008597 83 RFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPP---V---PLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGG 155 (560)
Q Consensus 83 ~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~---~---~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG 155 (560)
+|+++.++.++++++-++. +..++.. + +++++.-++.|.|.+..+.++.....+||| ++||
T Consensus 86 -------rr~~l~~~~~l~~i~~~~~-----a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg 153 (490)
T PRK10642 86 -------RQKILAITIVIMSISTFCI-----GLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRG 153 (490)
T ss_pred -------cHHHHHHHHHHHHHHHHHH-----HhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCc
Confidence 9999999999999998884 3333211 1 136667789999999999999999999997 6899
Q ss_pred ceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHH
Q 008597 156 TIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLM 235 (560)
Q Consensus 156 ~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 235 (560)
.+.|+...+..+|..+-+.+...+ ...+. +...
T Consensus 154 ~~~~~~~~~~~~G~~lg~~~~~~~----------------------~~~~~---~~~~---------------------- 186 (490)
T PRK10642 154 FMGSWLDFGSIAGFVLGAGVVVLI----------------------STIVG---EANF---------------------- 186 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----------------------HHhcC---HHHh----------------------
Confidence 998887766555544332111100 00000 0000
Q ss_pred HHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCC
Q 008597 236 IIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHEL 315 (560)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (560)
...+....+.+. ++..++.+. +....+ + + |+.... + +..++++
T Consensus 187 ------~~~gWR~~f~i~-~~~~l~~~~--~~~~~~----e------------s-----p~~~~~-~---~~~~~~~--- 229 (490)
T PRK10642 187 ------LDWGWRIPFFIA-LPLGIIGLY--LRHALE----E------------T-----PAFQQH-V---DKLEQGD--- 229 (490)
T ss_pred ------cCccHHHHHHHH-HHHHHHHHH--HHHcCC----C------------C-----hhHHHH-H---Hhhhhhc---
Confidence 001111111110 000000000 000000 0 0 000000 0 0000000
Q ss_pred CCCccccccccccccccccccCcHHHHhcC-hhHHHHHHHH-HHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHH
Q 008597 316 PGEESQVKAEFDDKKLKDEEDMNILQSVCT-LNFWLLFVAM-LCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSI 392 (560)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt-~~Fwll~~~~-~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si 392 (560)
.+ .. ++.++.++++.+++ +..|.+.+.. ++.......+...++++.+ .+|++..+.....+...+
T Consensus 230 -~~---------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 297 (490)
T PRK10642 230 -RE---------GL--QDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI 297 (490)
T ss_pred -cc---------cc--cccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 00 00 00011345566653 3444433222 2222333345667888875 468887766667778889
Q ss_pred hhhhhccccccchhhhhhhcCCCchHHHHHHHHH-HHHHHH--HHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhc
Q 008597 393 WNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT-MSVGHI--VVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF 468 (560)
Q Consensus 393 ~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l-~~~~~l--ll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~F 468 (560)
...+|++++|+++||+++| ..+.+...+ ...+.. ... .++...++++.++.|+++|...+..+..+.|.|
T Consensus 298 ~~~~~~~~~g~l~dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ 371 (490)
T PRK10642 298 GMLFVQPVMGLLSDRFGRR------PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF 371 (490)
T ss_pred HHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999644 333332222 222221 111 222334556667788888888888899999999
Q ss_pred cCCchhhhhhHH-HhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 469 GVGHMGTIFNTI-AIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 469 G~k~~g~~yG~~-~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
..+..++..|+. +++. +++ .++|.+.|++.|..++ ++.++.+..+.++++.+..+++
T Consensus 372 p~~~Rg~~~g~~~~~~~-~~g-~~~p~i~g~l~~~~~~-----------~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 372 PTHIRYSALAAAFNISV-LVA-GLTPTLAAWLVESTQN-----------LMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred CCccchHHHHHHHHHHH-HHH-HHHHHHHHHHHHHhCC-----------chHHHHHHHHHHHHHHHHHHHh
Confidence 999999988875 4433 334 2567788998886542 4555555566666666555444
No 45
>PRK09952 shikimate transporter; Provisional
Probab=99.77 E-value=1.3e-16 Score=172.75 Aligned_cols=391 Identities=11% Similarity=0.044 Sum_probs=222.0
Q ss_pred hchhHHHHHHHHHHHHhcCc-ccccccccHH-HHhhc--CCChhhhhHHHH-----HHhhhhhh-hhhHHHHHhhccccc
Q 008597 9 LKSKWIATVASIWIQCCSGA-TYTFGIYSST-LKSSQ--NYDQSTLDTVSV-----FKDIGANV-GVLSGLLYSFATLNH 78 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~-l~~~~--~~s~~~~~~i~~-----~~~~g~~~-~~~~G~~~d~~g~~~ 78 (560)
..++|.++..+.+....-+. ...++...+. +++++ +.++. ...+.. +..++..+ +++.|.+.||+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~G--- 92 (438)
T PRK09952 17 LSRARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLG--- 92 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc---
Confidence 34566665555555544322 3334444443 45554 56655 333322 12222323 466788888876
Q ss_pred cccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCc------HHHHHHHHHHhhcccchhhhhhHHHHhhhcc-
Q 008597 79 HHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPP------VPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG- 151 (560)
Q Consensus 79 ~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~------~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp- 151 (560)
+|.++.++.++..++..+ .+..++.. .+.+...=++.|.|.+..+.++.....+|+|
T Consensus 93 -----------rr~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~ 156 (438)
T PRK09952 93 -----------RKRMLMLTVWMMGIATAL-----IGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPK 156 (438)
T ss_pred -----------cHHHHHHHHHHHHHHHHH-----HhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCC
Confidence 899999999999988877 34433311 1135556688999999999999999999998
Q ss_pred CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHH
Q 008597 152 DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIA 231 (560)
Q Consensus 152 ~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~ 231 (560)
++||.+.+....+.++|..+-..+...+. ...+.. +.
T Consensus 157 ~~rg~~~~~~~~g~~~G~~l~~~~~~~l~--------------------------~~~~~~---~~-------------- 193 (438)
T PRK09952 157 NKKAFYSSGVQVGYGVGLLLSTGLVSLIS--------------------------MMTTDE---QF-------------- 193 (438)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------HhCCHH---Hh--------------
Confidence 57899999988888888766543322110 000000 00
Q ss_pred HHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCccc
Q 008597 232 AYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVA 311 (560)
Q Consensus 232 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (560)
...+....+.+. .+..++.+. .. + .. +|+++.. + ..+
T Consensus 194 ----------~~~gWr~~f~~~-~~~~l~~~~------l~----~--~~------------~es~~~~-~-------~~~ 230 (438)
T PRK09952 194 ----------LSWGWRIPFLFS-IVLVLIALW------VR----N--GM------------EESAEFE-Q-------QQH 230 (438)
T ss_pred ----------hccChHHHHHHH-HHHHHHHHH------HH----H--hC------------CCChhHH-H-------HHh
Confidence 000000001000 000000000 00 0 00 0000000 0 000
Q ss_pred ccCCCCCccccccccccccccccccCc-HHHHhcChhHHHHHHHH-HHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHH
Q 008597 312 YHELPGEESQVKAEFDDKKLKDEEDMN-ILQSVCTLNFWLLFVAM-LCGMGSGLATVNNISQIGE-SLGYPTSAINSLVS 388 (560)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~t-~~~~lkt~~Fwll~~~~-~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvS 388 (560)
+ .+ +. +++.+ .++.+|++++|.+.+.. ++..........+.+.+.+ .+|+++........
T Consensus 231 ~----~~---------~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~ 293 (438)
T PRK09952 231 E----QA---------AA----KKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGL 293 (438)
T ss_pred h----cc---------cc----cccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 0 00 00 00112 23467888888875533 3333333445566777664 56877665444555
Q ss_pred HHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH--Hh--hcC-cchHHHHHHHHHhhhhccccchhhH
Q 008597 389 LWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV--VA--SGF-PGNLYVGSIIVGVCYGCQWSLMPTI 463 (560)
Q Consensus 389 l~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~ll--l~--~~~-~~~l~~~~~l~G~~~G~~~~l~p~i 463 (560)
+.++...++++++|+++||+++|+ .. .....+.+++.+. .. ..+ ...+.+..++.|+++|...+..+++
T Consensus 294 ~~g~~~~i~~~~~g~l~Dr~grr~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 367 (438)
T PRK09952 294 LVGGLSCLTIPCFAWLADRFGRRR-----VY-ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPM 367 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchH-----HH-HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888999999999999997542 22 2333333332221 11 112 2223334566688888888889999
Q ss_pred HHHhccCCchhhhhhHHH-hhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 464 TYEIFGVGHMGTIFNTIA-IASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 464 ~~e~FG~k~~g~~yG~~~-~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
+.|.|+.++.++..|+.. ++..+|+. ++|.+.|+++|.++. .|+..+.+.+++++++.+..+.++
T Consensus 368 ~~e~~p~~~r~tg~g~~~~~~~~lgg~-~~p~i~g~l~~~~~~----------~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 368 FTEMFGASYRYSGAGVGYQVASVVGGG-FTPFIAAALVTYFGG----------SWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred HHHHCCcchhHHHHhHHHHHHHHHHHH-HHHHHHHHHHHhcCC----------CchHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999988888863 44556663 678899999996531 388899988888888887765544
No 46
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.77 E-value=2.1e-16 Score=173.94 Aligned_cols=379 Identities=10% Similarity=-0.048 Sum_probs=234.5
Q ss_pred cccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHH
Q 008597 32 FGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWA 110 (560)
Q Consensus 32 fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l 110 (560)
-++--|++.+++|.+++|.+.+..+..++... .++.|.+.||+| +|.++++|.+.+.+|..+.
T Consensus 25 v~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~G--------------rk~~l~~~~~~~~~~~~~~-- 88 (495)
T PRK14995 25 LHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIG--------------FKRLLMLGGTLFGLASLAA-- 88 (495)
T ss_pred HHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------cHHHHHHHHHHHHHHHHHH--
Confidence 34446899999999999999888888888754 778999999987 8999999999999999873
Q ss_pred HHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhc-c-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHH
Q 008597 111 SVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNF-G-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYL 188 (560)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~F-p-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fl 188 (560)
+..+ +++.++..-++.|.|.+..+.+......++| | ++||.+.|+..+..++|+.+-..+...+.+.-.....
T Consensus 89 ---~~a~--~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~ 163 (495)
T PRK14995 89 ---AFSP--TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSV 163 (495)
T ss_pred ---HHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHH
Confidence 3333 3667777778889999988888777788888 3 5799999999999999887777666655543333333
Q ss_pred HHHHHHhHHHH-HhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 189 LILALLPTFAS-LLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 189 l~la~~~~~v~-~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
+++......++ ++...++ |.+++++++.++............++.....+...+-.....+....+.-.++...+.
T Consensus 164 f~i~~~~~~~~~~l~~~~l---~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 164 FLINVPIVLVVMGLTARYV---PRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHhC---CCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 32222112222 2222222 2222122222221111111111111111111111111111111111111111110000
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
. .+ . +.++| .-..+++|++.
T Consensus 241 --~----~e--~-----------------------------------------------~~~~p-----~~~~~lf~~~~ 260 (495)
T PRK14995 241 --R----TQ--L-----------------------------------------------AASRP-----MIDMRLFTHRI 260 (495)
T ss_pred --H----HH--h-----------------------------------------------cCCCC-----CcCHHHhCCcc
Confidence 0 00 0 00000 11267899999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
|+...+..++...+........+.+.|. +|+++.+++.+....++...++.++.|++.||+++| ..+.....+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~------~~~~~g~~~ 334 (495)
T PRK14995 261 ILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR------LVATGGMAL 334 (495)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch------HHHHHHHHH
Confidence 9987776666555444445566777765 699999999999999999999999999999998632 334444455
Q ss_pred HHHHHHHHh---h-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 427 MSVGHIVVA---S-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 427 ~~~~~lll~---~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
.+++.+++. . +.....++..++.|++.|..+......+.+....++.+...++.++...+|. .+|+.+.|.+++
T Consensus 335 ~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~-~~G~ai~g~i~~ 412 (495)
T PRK14995 335 SALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGA-GLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 555544332 1 2223355677888999998887777778888998999999888866666665 355556666654
No 47
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.77 E-value=1.9e-16 Score=169.06 Aligned_cols=355 Identities=13% Similarity=-0.004 Sum_probs=212.4
Q ss_pred chhHHHHHHHHHHHHhcC-cccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccccc
Q 008597 10 KSKWIATVASIWIQCCSG-ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFL 87 (560)
Q Consensus 10 ~~rw~~l~~~~~i~~~~G-~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~ 87 (560)
++.|+..+...+.+.+.. ....+...-+++++++|+|+++.+.+.....++..+ .++.|.+.||+|
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g------------ 76 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIG------------ 76 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 445555555555444321 122233334678999999999999777777777765 678999999986
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC-Ccceeeehhhhhh
Q 008597 88 RGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY-GGTIVGIMKGFLG 166 (560)
Q Consensus 88 ~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~-RG~a~Gi~~~~~G 166 (560)
+|+++.++.+...++..+...+ + +++.+....++.|.+.+...........++||++ |+.+.|+.....+
T Consensus 77 --~r~~l~~~~~~~~~~~~~~~~~-----~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 147 (406)
T PRK15402 77 --RRPVMLAGVAFFILTCLAILLA-----Q--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVAL 147 (406)
T ss_pred --ChHHHHHHHHHHHHHHHHHHHH-----c--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHH
Confidence 8889999998888887774322 2 3556666678888888887777777788899864 5666676666555
Q ss_pred hhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhccccc
Q 008597 167 LGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTF 246 (560)
Q Consensus 167 Lsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 246 (560)
++..+-..+...+. +..+.
T Consensus 148 ~~~~~g~~i~~~l~-------------------------------------------------------------~~~~w 166 (406)
T PRK15402 148 LAPLLGPLVGAALI-------------------------------------------------------------HVLPW 166 (406)
T ss_pred HHHHHHHHHHHHHH-------------------------------------------------------------HccCc
Confidence 55444322221110 00111
Q ss_pred chhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccc
Q 008597 247 PLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEF 326 (560)
Q Consensus 247 ~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (560)
...+.+.....++..+. .....| + ++...+ +++ +
T Consensus 167 ~~~~~~~~~~~~~~~~~--~~~~~~----~------------------~~~~~~------~~~--------~-------- 200 (406)
T PRK15402 167 RGMFVLFAALAALSFFG--LWRAMP----E------------------TAGRVG------EKL--------S-------- 200 (406)
T ss_pred cHHHHHHHHHHHHHHHH--HHHhCC----C------------------CCcccc------ccc--------c--------
Confidence 11111110110110010 000000 0 000000 000 0
Q ss_pred ccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccch
Q 008597 327 DDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVS 405 (560)
Q Consensus 327 ~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~ls 405 (560)
. +....+.++.+|++.+|.+.+.+++............+.+. +.+|.++.+.+.......++..+|++++|+++
T Consensus 201 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~ 275 (406)
T PRK15402 201 ----L-KELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLT 275 (406)
T ss_pred ----H-HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00012346789999999988776655544334445566665 45788877777777777788999999999999
Q ss_pred hhhhhhcCCCchHHHHHHHHHHHHHHHHHhh------cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhH
Q 008597 406 DIVLHRMGWERPSFIAITLATMSVGHIVVAS------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNT 479 (560)
Q Consensus 406 D~~~~~~~~~R~~~l~~~~~l~~~~~lll~~------~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~ 479 (560)
||+++|+ .+.+...+.+++.+++.. .+...+.+..++.|++.|..++.....+... ..++.|...+.
T Consensus 276 ~r~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~~g~~~~~ 348 (406)
T PRK15402 276 SRRPLRS------LIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVSKGTVSAA 348 (406)
T ss_pred HhcCHHH------HHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-ccccccHHHHH
Confidence 9986432 333444444444443221 1223355677888888887765554443332 23789999999
Q ss_pred HHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 480 IAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 480 ~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
+++....|. .+++.+.|.+||..+.
T Consensus 349 ~~~~~~~~~-~~g~~~~~~l~~~~~~ 373 (406)
T PRK15402 349 MGMLSMLIF-TVGIELSKHAYLGGGN 373 (406)
T ss_pred HHHHHHHHH-HHHHHHHHhcccCCch
Confidence 988777776 4788899999998763
No 48
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.77 E-value=2.1e-16 Score=170.59 Aligned_cols=391 Identities=10% Similarity=-0.034 Sum_probs=212.1
Q ss_pred hhhhchhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcC---CChhhhhHHHHHHh---hhhhh-hhhHHHHHhhcccc
Q 008597 6 RLNLKSKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQN---YDQSTLDTVSVFKD---IGANV-GVLSGLLYSFATLN 77 (560)
Q Consensus 6 ~~~~~~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~---~s~~~~~~i~~~~~---~g~~~-~~~~G~~~d~~g~~ 77 (560)
...+++||..++.+.+....... .+.+++.++.++++++ .+..|...+..... ++..+ +++.|.+.||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~G-- 91 (432)
T PRK10406 14 SSDTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHG-- 91 (432)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 34456777655555433333221 3346666788999885 44444332222222 22223 567788888876
Q ss_pred ccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCC--CCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCC
Q 008597 78 HHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIH--SPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYG 154 (560)
Q Consensus 78 ~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~--~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~R 154 (560)
+|+++.++.+++.++.++...+ .+... ..+...++..=++.|.|.+..+..+.+...+|+| ++|
T Consensus 92 ------------rr~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~r 158 (432)
T PRK10406 92 ------------RKKSMLISVCMMCFGSLVIACL-PGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRK 158 (432)
T ss_pred ------------cHHHHHHHHHHHHHHHHHHhhc-CCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcc
Confidence 9999999999999988874222 11100 0012346667789999999999999999999997 679
Q ss_pred cceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHH
Q 008597 155 GTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYL 234 (560)
Q Consensus 155 G~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l 234 (560)
|.+.++...+...|..+-..+ ... +. ...+.. +.
T Consensus 159 g~~~~~~~~~~~~G~~~~~~~-~~~---------------------~~----~~~~~~---~~----------------- 192 (432)
T PRK10406 159 GFYASFQYVTLIGGQLLALLV-VVV---------------------LQ----QTLEDA---EL----------------- 192 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHH-HHH---------------------HH----HhCCHH---HH-----------------
Confidence 987776554443333222110 000 00 000000 00
Q ss_pred HHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccC
Q 008597 235 MIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHE 314 (560)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (560)
...+....+.+ ..+..+.... .. . .. +|++.. +.
T Consensus 193 -------~~~gWr~~F~i----~~~~~ll~~~---~~---~---~~------------~e~~~~------------~~-- 226 (432)
T PRK10406 193 -------REWGWRIPFAL----GAVLAVVALW---LR---R---QL------------DETSQQ------------ET-- 226 (432)
T ss_pred -------hccchHHHHHH----HHHHHHHHHH---HH---h---cC------------CCCchH------------HH--
Confidence 00111111111 1111111000 00 0 00 000000 00
Q ss_pred CCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHh-hhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHH
Q 008597 315 LPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCG-MGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSI 392 (560)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~-~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si 392 (560)
+ +. .+..++++.+|++++|.+.+.+++. ......+.+++|++.+ .+|++..+.+...++..+
T Consensus 227 ---~---------~~----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~ 290 (432)
T PRK10406 227 ---R---------AL----KEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALF 290 (432)
T ss_pred ---h---------hh----cccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 0 00 0012467889999999887766554 3334455677888875 468887777788888888
Q ss_pred hhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH--HH-hh-c-CcchHHHHHHHHHhhhhccccchhhHHHHh
Q 008597 393 WNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI--VV-AS-G-FPGNLYVGSIIVGVCYGCQWSLMPTITYEI 467 (560)
Q Consensus 393 ~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l--ll-~~-~-~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~ 467 (560)
...++.++.|+++||+++|+ ..+ +...+.++... +. .. . .+........+.+++.+...+..+..+.|.
T Consensus 291 ~~~i~~~~~G~l~Dr~grr~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 364 (432)
T PRK10406 291 VFMLIQPLIGALSDKIGRRT-----SML-CFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEM 364 (432)
T ss_pred HHHHHHHHHHHHHHHcCchH-----HHH-HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999996442 222 22222211111 11 11 1 111111112222334444445677888999
Q ss_pred ccCCchhhhhhHHHh-hhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 468 FGVGHMGTIFNTIAI-ASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 468 FG~k~~g~~yG~~~~-a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
|..|+.++.+|+.+. +..+.+. ..|.+.+ +.|.+|. |...+++.++.++++.+..+.+
T Consensus 365 fp~~~r~t~~g~~~~~g~~~~g~-~~p~~~~-~l~~~g~-----------~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 365 FPAQVRALGVGLSYAVANALFGG-SAEYVAL-SLKSIGM-----------ETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred CCCCccchhhhHHHHHHHHHHHh-HHHHHHH-HHHHhCC-----------CcHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999864 3333222 3555566 4466553 7777777777777776655543
No 49
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.77 E-value=7.5e-17 Score=173.93 Aligned_cols=195 Identities=9% Similarity=0.015 Sum_probs=143.4
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCC--------cchhHHHHHHHHhhhhhccccccchhhhh
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPT--------SAINSLVSLWSIWNFLGRFGGGYVSDIVL 409 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~--------~~aa~lvSl~si~n~~GRl~~G~lsD~~~ 409 (560)
+.++.+|+|+||.+.+..++....-.....+.+.+.++.|.++ ...+...++..+...++++..|+++||++
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g 279 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG 279 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3567899999999888777654433334455566677777554 34477889999999999999999999995
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHHhh--cCc---chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH-hh
Q 008597 410 HRMGWERPSFIAITLATMSVGHIVVAS--GFP---GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA-IA 483 (560)
Q Consensus 410 ~~~~~~R~~~l~~~~~l~~~~~lll~~--~~~---~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~-~a 483 (560)
+| ..+.+...+.+++..++.. +.+ ..+++..++.|+++|...+..+.+++|.++.++.++.+|+.+ ..
T Consensus 280 ~r------~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~ 353 (418)
T TIGR00889 280 IK------KVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMC 353 (418)
T ss_pred cH------HHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 33 3455555566665544332 111 235567888999999888888999999999999999999996 56
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRF 545 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~ 545 (560)
..+|. .++|.+.|+++|+.++.. ...|+.+|.+.++++++++++...+..+.++.
T Consensus 354 ~~lg~-~iGp~l~G~l~~~~g~~~------~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 354 NGFGS-LLGYILSGVMVEKMFAYG------TFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HhhHH-HHHHHHHHHHHHHhcccc------CCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 67788 489999999999865211 12499999999999888887777666544443
No 50
>TIGR00898 2A0119 cation transport protein.
Probab=99.77 E-value=6.9e-18 Score=185.22 Aligned_cols=385 Identities=13% Similarity=0.078 Sum_probs=236.1
Q ss_pred cCcccccccccHHHHhhcCCC---hhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHH
Q 008597 26 SGATYTFGIYSSTLKSSQNYD---QSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILC 101 (560)
Q Consensus 26 ~G~~Y~fs~ys~~l~~~~~~s---~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~ 101 (560)
.|-.|.++.+.+.+++++|++ ..+...+.....+|..+ .++.|.+.||+| +|++++++.++.
T Consensus 102 ~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~G--------------rr~~~~~~~~~~ 167 (505)
T TIGR00898 102 DGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFG--------------RKKVLLLSTLVT 167 (505)
T ss_pred CCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhcc--------------chHHHHHHHHHH
Confidence 356677778899999999999 88888888888888877 678999999986 888999999888
Q ss_pred HHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhc
Q 008597 102 FAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIW 180 (560)
Q Consensus 102 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f 180 (560)
.++.++. ... ++++.+.+.-++.|.+.+..+..+.....+++|+ +||.+.++...++++|..+...+. .+.
T Consensus 168 ~i~~~~~-----~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~-~~~ 239 (505)
T TIGR00898 168 AVSGVLT-----AFS--PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVA-YFI 239 (505)
T ss_pred HHHHHHH-----HHc--ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHH-HHh
Confidence 8887763 222 2467777788899999999999999999999975 599999998888888876655443 222
Q ss_pred CCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 008597 181 KGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLF 260 (560)
Q Consensus 181 ~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (560)
. + ...++++...|.++.++..++++..|.. +. ..-+.....+..-
T Consensus 240 ~-~-wr~~~~~~~i~~~~~~~~~~~~~esp~~---------------------l~------~~~~~~~a~~~l~------ 284 (505)
T TIGR00898 240 P-D-WRWLQLAVSLPTFLFFLLSWFVPESPRW---------------------LI------SQGRIEEALKILQ------ 284 (505)
T ss_pred h-H-HHHHHHHHHHHHHHHHHHHHhcCCChHH---------------------HH------HCCCHHHHHHHHH------
Confidence 2 2 2223333333333333333332111100 00 0000000000000
Q ss_pred HhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHH
Q 008597 261 LLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNIL 340 (560)
Q Consensus 261 ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 340 (560)
+. .+.++ . + . +++.. .+..+ + +.. ++.+..+.+
T Consensus 285 ----------~~--~~~~~---------~---~---~-----------~~~~~-~~~~~----~--~~~--~~~~~~~~~ 317 (505)
T TIGR00898 285 ----------RI--AKING---------K---K---L-----------PAEVL-SLSLE----K--DLS--SSKKQYSFL 317 (505)
T ss_pred ----------HH--HHHcC---------C---C---C-----------CHHHH-hhhhh----h--hhh--hccCCCcHH
Confidence 00 00000 0 0 0 00000 00000 0 000 001135778
Q ss_pred HHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHH
Q 008597 341 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 420 (560)
Q Consensus 341 ~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l 420 (560)
+++|+|.+|...+...+..+........+....+.++.+ ......+.++....|+++.++++||+++ +..+
T Consensus 318 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~gr------r~~~ 388 (505)
T TIGR00898 318 DLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGNLGGN---IYLDLFISGLVELPAKLITLLLIDRLGR------RYTM 388 (505)
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCC------HHHH
Confidence 999999999887766554433222222222222333433 2233346678888999999999999853 3455
Q ss_pred HHHHHHHHHHHHHHhh-cCc--chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhh
Q 008597 421 AITLATMSVGHIVVAS-GFP--GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 497 (560)
Q Consensus 421 ~~~~~l~~~~~lll~~-~~~--~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G 497 (560)
.+.+.+.+++++++.. +.. .......++.+++.+..+.+....++|.|+.+..++..|+......+|.. ++|.+.+
T Consensus 389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~-i~p~i~~ 467 (505)
T TIGR00898 389 AASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSI-ISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHH-HHhHHHH
Confidence 5555666666554432 222 23344456667778888888889999999999999999999888888884 7888877
Q ss_pred hhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 498 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 498 ~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
+ +..+ +..+|.+.+++++++.++.+++
T Consensus 468 -~-~~~~------------~~~~~~~~~~~~~~~~~~~~~l 494 (505)
T TIGR00898 468 -L-GEKW------------LFLPLVLFGGLALLAGILTLFL 494 (505)
T ss_pred -H-HHHH------------HhhHHHHHHHHHHHHHHHHHcC
Confidence 3 3332 4567888888777776665543
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.76 E-value=2.3e-16 Score=167.45 Aligned_cols=181 Identities=15% Similarity=0.088 Sum_probs=123.5
Q ss_pred HHHhcChhHHHHHHHHHHhhhhh-hhhhhcHHHHHHHcCCCCcc----hhHHHHHHHHhhhhhccccccchhhhhhhcCC
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSG-LATVNNISQIGESLGYPTSA----INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 414 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~g-l~~i~~~~~i~~~lG~~~~~----aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~ 414 (560)
.+.+|++++|.......+..... .......+.+.++.+.+..+ .+.+.++.++.+.++++.+|+++||+++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~--- 288 (408)
T PRK09874 212 VTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE--- 288 (408)
T ss_pred HHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---
Confidence 55678888876443332222211 12234455565655433222 23455677889999999999999998643
Q ss_pred CchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhh
Q 008597 415 ERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 493 (560)
Q Consensus 415 ~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~ 493 (560)
..+.+...+.+++.+... .+++..+++..++.|++.|...+.....+.+..+.++.|..+++......+|. .++|
T Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~-~~gp 364 (408)
T PRK09874 289 ---KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGN-VTGP 364 (408)
T ss_pred ---hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHH-HhhH
Confidence 233334344444443332 23444566677889999999888888888888888999999999877777777 4788
Q ss_pred hhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 494 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 494 ~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
.+.|.+.|..+ |+..|.+.+++.+++.++.....
T Consensus 365 ~~~G~l~~~~g------------~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 365 LMGAAISANYG------------FRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHHhhcc------------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999775 99999999999988887665443
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.76 E-value=2.8e-16 Score=164.85 Aligned_cols=348 Identities=13% Similarity=0.038 Sum_probs=216.4
Q ss_pred hhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCC
Q 008597 11 SKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
+|+..+.++.......+ ...+...-|.+++++|+|.+|...+.....++..+ .++.|.+.||+|
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g-------------- 68 (385)
T TIGR00710 4 KAFALLLGCLSILGPLG-IDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYG-------------- 68 (385)
T ss_pred hHHHHHHHHHHHHHHHH-HHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcC--------------
Confidence 34444443333322222 23344445788999999999999887777787766 778899999986
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhh
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLG 168 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLs 168 (560)
+|+++.++.++..++..+.... + +++.++...++.|.+.+..+++......+++|+ +||.+.|+......++
T Consensus 69 ~r~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 141 (385)
T TIGR00710 69 RRPVLLLGLFIFALSSLGLALS-----N--NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALA 141 (385)
T ss_pred ChHHHHHHHHHHHHHHHHHHHH-----c--cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 8889999999988888875332 2 356677777888999999999988888999985 6999999999998888
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccch
Q 008597 169 GAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL 248 (560)
Q Consensus 169 a~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 248 (560)
+.+-..+...+.+. .+...
T Consensus 142 ~~~g~~~~~~l~~~-------------------------------------------------------------~~~~~ 160 (385)
T TIGR00710 142 PAVAPLLGGYILVW-------------------------------------------------------------LSWHA 160 (385)
T ss_pred HHHHHHHHHHHHHH-------------------------------------------------------------cCHHH
Confidence 87765443322110 00000
Q ss_pred hHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccc
Q 008597 249 WARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDD 328 (560)
Q Consensus 249 ~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (560)
.+.+.....++..+.... ..| + ++..+ ++ ++
T Consensus 161 ~~~~~~~~~~~~~~~~~~--~~~----~------------------~~~~~--------~~--------~~--------- 191 (385)
T TIGR00710 161 IFAFLSLAGILLSALIFF--ILP----E------------------TLPYE--------AR--------IQ--------- 191 (385)
T ss_pred HHHHHHHHHHHHHHHHHH--hCC----C------------------CCCCc--------cc--------CC---------
Confidence 000000000010000000 000 0 00000 00 00
Q ss_pred ccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhh
Q 008597 329 KKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI 407 (560)
Q Consensus 329 ~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~ 407 (560)
. +....+.++.+|++.+|.+.+...+............+.+.+ ..|.++.+.+.+.+..++...+|+++.|+++||
T Consensus 192 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~ 268 (385)
T TIGR00710 192 I---STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKK 268 (385)
T ss_pred H---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0 000123577899999998877665555544455556666665 678988888888999999999999999999999
Q ss_pred hhhhcCCCchHHHHHHHHHHHHHHHHHh---h-c-C-cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH
Q 008597 408 VLHRMGWERPSFIAITLATMSVGHIVVA---S-G-F-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA 481 (560)
Q Consensus 408 ~~~~~~~~R~~~l~~~~~l~~~~~lll~---~-~-~-~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~ 481 (560)
+++|+ .+.+...+..++.+++. . . . ...+....++.|++++..+...+....|.++ ++.++..++..
T Consensus 269 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~ 341 (385)
T TIGR00710 269 WGAKS------LLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFG 341 (385)
T ss_pred cCHHH------HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHH
Confidence 86443 22233333333332221 1 1 1 1234445677889999988888888888886 67888888876
Q ss_pred hhhhhHHhhhhhhhhhhhcc
Q 008597 482 IASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 482 ~a~~~g~~ll~~~l~G~iyD 501 (560)
.....++.+.++ +.|.+.|
T Consensus 342 ~~~~~~g~i~~~-~~~~~~~ 360 (385)
T TIGR00710 342 TLRLVLGAIVGY-LVSLIHG 360 (385)
T ss_pred HHHHHHHHHHHH-HHHhccc
Confidence 544333333444 5664443
No 53
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.76 E-value=2.2e-16 Score=169.97 Aligned_cols=382 Identities=12% Similarity=0.032 Sum_probs=233.3
Q ss_pred HhcCccccc-ccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHH
Q 008597 24 CCSGATYTF-GIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILC 101 (560)
Q Consensus 24 ~~~G~~Y~f-s~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~ 101 (560)
..-|..+.. +...+++++++|+|.+|...+..+..++..+ +++.|++.||+| +|+++.+|.+++
T Consensus 13 ~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G--------------~r~~~~~g~~l~ 78 (410)
T TIGR00885 13 ALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLS--------------YKAGILLGLFLY 78 (410)
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------chHHHHHHHHHH
Confidence 344444444 3666999999999999999888888888876 789999999987 899999999999
Q ss_pred HHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhc
Q 008597 102 FAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIW 180 (560)
Q Consensus 102 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f 180 (560)
.+|..+++... .. .+++.++...++.|.|.+..+++.-....+..| ++|+...++..++.++|+.+-..+...++
T Consensus 79 ~~g~~l~~~~~--~~--~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 79 ALGAFLFWPAA--EI--MNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHH--hh--ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987743221 11 246777788899999999999988877777776 46898999999999999887765555443
Q ss_pred CCCch-hHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH
Q 008597 181 KGRPS-TYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLL 259 (560)
Q Consensus 181 ~~~~~-~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (560)
..+.. .-...+ . ...++++. . |. ..+..+....+.+...+.++
T Consensus 155 ~~~~~~~~~~~~--------------~-----~~~~~~~~--~----------~~-----~~~~~~w~~~fl~~a~~~~~ 198 (410)
T TIGR00885 155 LSNLPHQSQDVL--------------D-----KLSPEELS--A----------IK-----HSDLASVQTPYMIIGAVVLA 198 (410)
T ss_pred hcCCccchhhhh--------------h-----hcCHHHHH--H----------HH-----HHHHHHHHHHHHHHHHHHHH
Confidence 11000 000000 0 00000000 0 00 00000111111111111111
Q ss_pred HHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcH
Q 008597 260 FLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNI 339 (560)
Q Consensus 260 ~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 339 (560)
..+.. .. .+ .|+.+.+ ++ + +. + ...+.
T Consensus 199 ~~~~~-~~--~~----------------------~p~~~~~-------~~-~----------------~~---~-~~~~~ 225 (410)
T TIGR00885 199 VALLI-ML--TK----------------------MPALNHS-------DA-K----------------QI---S-FSASL 225 (410)
T ss_pred HHHHH-HH--hc----------------------CCCCCcc-------cc-c----------------cc---c-chhhH
Confidence 11110 00 00 0000000 00 0 00 0 00134
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcC--CCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCch
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLG--YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG--~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~ 417 (560)
++.+|+|.+|...+..++..+...++.++++++.++.+ .++..++...+.+-..-.+||+++|++.||+.+ |+
T Consensus 226 ~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~-----~~ 300 (410)
T TIGR00885 226 SRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAA-----HK 300 (410)
T ss_pred HHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-----HH
Confidence 57889999999888888877777677788899888764 333344556777777889999999999999853 33
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhh
Q 008597 418 SFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 497 (560)
Q Consensus 418 ~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G 497 (560)
. +.+.....++.+++........-....++.|++.+..|++.-++..+.+|.+.....-+++ ++ .+|+- +.|++.|
T Consensus 301 ~-l~i~~~~~~~~~ll~~~~~~~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~~-~~Gga-~~p~l~G 376 (410)
T TIGR00885 301 V-LMAYAIIGMALCLGSIFAGGHVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLV-MA-IIGGG-IVPPLQG 376 (410)
T ss_pred H-HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HH-Hhccc-hHHHHHH
Confidence 3 3344444444444433322223345667888999999999999999999955544444444 32 36663 6788999
Q ss_pred hhcccccCCCCCcccCccccHHHHHHHHHH
Q 008597 498 YIYDNVASGEGNSCNGTHCFMLSFLIMASV 527 (560)
Q Consensus 498 ~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l 527 (560)
.+.|+.+... .+.++.+|++...+
T Consensus 377 ~~~d~~~~~~------~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 377 FIIDMKEIAA------APAVNTSFILPLLC 400 (410)
T ss_pred HHHHHhcccc------cCccchHHHHHHHH
Confidence 9999653110 01388889875543
No 54
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.75 E-value=2.2e-16 Score=165.00 Aligned_cols=336 Identities=15% Similarity=0.122 Sum_probs=194.6
Q ss_pred cCcccccccccHH-HHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHH
Q 008597 26 SGATYTFGIYSST-LKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFA 103 (560)
Q Consensus 26 ~G~~Y~fs~ys~~-l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~ 103 (560)
....|.++.+.++ +++++|+|..+.+.+.....++..+ .++.|.+.||+| +|++++++.++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--------------~r~~~~~~~~~~~i 79 (366)
T TIGR00886 14 FSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFG--------------PRYTTTLSLLLLAI 79 (366)
T ss_pred HHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhC--------------chHHHHHHHHHHHH
Confidence 3455778889996 9999999999999888888888766 788999999987 88899999999999
Q ss_pred HHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCC
Q 008597 104 GYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKG 182 (560)
Q Consensus 104 G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~ 182 (560)
+..+.... + .+++.+....++.|.+.+. +.++.....+++| ++||.+.++..+...+|..+-..+...+.
T Consensus 80 ~~~~~~~~-----~-~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~-- 150 (366)
T TIGR00886 80 PCLWAGLA-----V-QSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII-- 150 (366)
T ss_pred HHHHHHHH-----h-hhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH--
Confidence 98875433 1 0355666666777777553 5667777889997 57999999987655555544432221110
Q ss_pred CchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHH-HHHHHHHH
Q 008597 183 RPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARII-TFLFLLFL 261 (560)
Q Consensus 183 ~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~l 261 (560)
..++...+.+ +... ....+... ..+..+..
T Consensus 151 --------------------~~~~~~~~~~---~~~~--------------------------w~~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 151 --------------------GSLIFGAGLP---AHLA--------------------------WGWAFVIVPAGILLLPA 181 (366)
T ss_pred --------------------HHHHhccccc---cccc--------------------------ccchhHHHHHHHHHHHH
Confidence 0001000000 0000 00000000 00000000
Q ss_pred hhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHH
Q 008597 262 LSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQ 341 (560)
Q Consensus 262 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 341 (560)
+.... ..+ +..+ +++++.. .+..++ .. ..+ +......++
T Consensus 182 ~~~~~--~~~----~~~~-------------~~~~~~~-------~~~~~~----~~---------~~~--~~~~~~~~~ 220 (366)
T TIGR00886 182 LLIFF--VGA----DTPP-------------GKPATGK-------LSFKGA----RW---------SVG--TGALGDQLK 220 (366)
T ss_pred HHHHH--hcc----cCCc-------------ccccchh-------cccccc----cc---------ccc--chhHHHHHH
Confidence 00000 000 0000 0000000 000000 00 000 000014578
Q ss_pred HhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHH
Q 008597 342 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 420 (560)
Q Consensus 342 ~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l 420 (560)
.+|++++|.+.+.+++..+....+.+..+++.++ +|.++.+++.+.++..+.+.+||+++|+++||+++|+ ....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~----~~~~ 296 (366)
T TIGR00886 221 VFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR----KLLM 296 (366)
T ss_pred HHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch----hHHH
Confidence 8999999999888887776666667778888865 5888888888899999999999999999999997542 2222
Q ss_pred HHHHHHHHHHHH--HHhhc---CcchH----HHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhh
Q 008597 421 AITLATMSVGHI--VVASG---FPGNL----YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASP 485 (560)
Q Consensus 421 ~~~~~l~~~~~l--ll~~~---~~~~l----~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~ 485 (560)
. +.+...+.+ .+... +.... .+..+..|+++|..++ ++++.+. +|.|+.+|++.....
T Consensus 297 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~-~~~g~~~g~~~~~~~ 363 (366)
T TIGR00886 297 S--FLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFA----LVPHIFR-RATGAVSGLVGAIGN 363 (366)
T ss_pred H--HHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhh----cchhhch-hhcccHHHHHHHhcc
Confidence 2 222233322 22222 22222 2233444555555444 4455554 799999999865443
No 55
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.74 E-value=2e-16 Score=174.30 Aligned_cols=427 Identities=12% Similarity=0.017 Sum_probs=225.8
Q ss_pred chhHHHHHHHHHHHHhcCcccc-cccccHHHHhhc-----CCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccc
Q 008597 10 KSKWIATVASIWIQCCSGATYT-FGIYSSTLKSSQ-----NYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRT 82 (560)
Q Consensus 10 ~~rw~~l~~~~~i~~~~G~~Y~-fs~ys~~l~~~~-----~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~ 82 (560)
+..|.++..+.+..+..|.-.. .+.-.+.+++++ +.+..+...+.....+|..+ .++.|++.||+|
T Consensus 12 ~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~G------- 84 (502)
T TIGR00887 12 WQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLG------- 84 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------
Confidence 3344444444444444443222 222235555532 34455666777778888776 678999999987
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeeh
Q 008597 83 RFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIM 161 (560)
Q Consensus 83 ~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~ 161 (560)
+|+++.++.+...++..+........ ...+++.++..-++.|.+.+..+..+......+|| ++||.++++.
T Consensus 85 -------rr~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~ 156 (502)
T TIGR00887 85 -------RKRVYGMELIIMIIATVASGLSPGSS-PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAV 156 (502)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHccCcc-cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHH
Confidence 89999999999998887754331110 00124567778889999999999999999999998 5799999999
Q ss_pred hhhhhhhHHHHHHHHHHh---cC--------------------CCchhHHHHHHHHhHHHHHhhheeeeecCCCCCcccc
Q 008597 162 KGFLGLGGAALIQAYDTI---WK--------------------GRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKK 218 (560)
Q Consensus 162 ~~~~GLsa~i~s~i~~~~---f~--------------------~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~ 218 (560)
.....+|..+-..+...+ +. +.....++++...|.++.++..+++..-|.
T Consensus 157 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr------- 229 (502)
T TIGR00887 157 FAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPR------- 229 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHH-------
Confidence 888888775554333221 10 012333444444444443333222211110
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCC
Q 008597 219 HLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETT 298 (560)
Q Consensus 219 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (560)
|++ .+++.+++..........++..
T Consensus 230 --------------~l~----------------------------------------~~~~~~~~a~~~~~~~~~~~~~- 254 (502)
T TIGR00887 230 --------------YTA----------------------------------------DVAKDVEQAASDMSAVLQVKIE- 254 (502)
T ss_pred --------------HHH----------------------------------------HhCcchHHHHHHHHHHhccccc-
Confidence 000 0000000000000000000000
Q ss_pred cCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcCh---hH----HHHHHHHHHhhhhhhhhhhcHHH
Q 008597 299 TSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTL---NF----WLLFVAMLCGMGSGLATVNNISQ 371 (560)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~---~F----wll~~~~~~~~g~gl~~i~~~~~ 371 (560)
++.++. +..+ ++ .+..+.+++++++++ +. +.++..+++.......+..+.|.
T Consensus 255 ---------~~~~~~-~~~~---------~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~ 313 (502)
T TIGR00887 255 ---------AEPDEV-EKAS---------TA--VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKV 313 (502)
T ss_pred ---------cCcccc-cchh---------cc--ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHH
Confidence 000000 0000 00 000112456666532 22 21222222222222234456788
Q ss_pred HHHHcCCCCcchhH------------HHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--hc
Q 008597 372 IGESLGYPTSAINS------------LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA--SG 437 (560)
Q Consensus 372 i~~~lG~~~~~aa~------------lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~--~~ 437 (560)
+.++.|+++.+++. ...+..+++.+|.+++++++||++|| ..+.+...+++++++++. .+
T Consensus 314 i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR------~~l~~~~~~~~~~~~~l~~~~~ 387 (502)
T TIGR00887 314 ILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK------PIQLMGFFILTVLFFVLGFAYN 387 (502)
T ss_pred HHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch------hHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887543211 23445567778999999999999643 334444444444443322 11
Q ss_pred --C-cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCc
Q 008597 438 --F-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGT 514 (560)
Q Consensus 438 --~-~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~ 514 (560)
. ...+.+..+...+...+..++....++|+|+.+.+++..|+......++++ +++.+.+++.|..+...+. ...
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~--~~~ 464 (502)
T TIGR00887 388 HLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAI-IGQFGFLYLAQHGDPTKGY--PTG 464 (502)
T ss_pred hcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHH-HHHHHhhhhhccccccccc--ccc
Confidence 1 111221111111211223445566779999999999999999888888885 7888999999965321000 000
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008597 515 HCFMLSFLIMASVAFVGCLVAFLLFIRTRR 544 (560)
Q Consensus 515 ~cy~~~f~i~~~l~~la~vl~l~l~~r~r~ 544 (560)
.-+...|.+.+++++++.+..+++ ..+|+
T Consensus 465 ~~~~~~~~i~~~~~~~~~i~~~~l-pEt~~ 493 (502)
T TIGR00887 465 IWMGHVLEIFALFMFLGILFTLLI-PETKG 493 (502)
T ss_pred ccchHHHHHHHHHHHHHHHHheEe-ccCCC
Confidence 124668888888888876654322 34444
No 56
>PRK15075 citrate-proton symporter; Provisional
Probab=99.73 E-value=1.3e-15 Score=164.53 Aligned_cols=360 Identities=13% Similarity=0.031 Sum_probs=204.8
Q ss_pred hhHHHHHHHHHHHHhcCc-ccccccccHHHHhhcCCChhhhhHH-HHHHhhhh-h----h-hhhHHHHHhhccccccccc
Q 008597 11 SKWIATVASIWIQCCSGA-TYTFGIYSSTLKSSQNYDQSTLDTV-SVFKDIGA-N----V-GVLSGLLYSFATLNHHHRT 82 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G~-~Y~fs~ys~~l~~~~~~s~~~~~~i-~~~~~~g~-~----~-~~~~G~~~d~~g~~~~~~~ 82 (560)
+||....+..+...+... ...++.+.|.++++++.+++|...+ .....++. + + .++.|.+.||+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~G------- 84 (434)
T PRK15075 12 SKARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVG------- 84 (434)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhc-------
Confidence 556644433333333332 4457888999999999998886532 22222222 1 2 467788888886
Q ss_pred cccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHH--------HHHHHHHHhhcccchhhhhhHHHHhhhcc-CC
Q 008597 83 RFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVP--------LMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DY 153 (560)
Q Consensus 83 ~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~--------~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~ 153 (560)
+|++++++.++..++..+. +..++ ++ .+++.-++.|.+.+..+.++.....+|+| ++
T Consensus 85 -------rr~~l~~~~~~~~~~~~l~-----~~~~~--~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~ 150 (434)
T PRK15075 85 -------RRKGLIVTLSIMASGTLLI-----AFVPG--YATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR 150 (434)
T ss_pred -------hHHHHHHHHHHHHHHHHHH-----HhCCc--HHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc
Confidence 8999999999988888773 33332 22 34556688899999888888888999997 57
Q ss_pred CcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHH
Q 008597 154 GGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAY 233 (560)
Q Consensus 154 RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (560)
||.++|+...+..++..+-..+...+ ...+. |...
T Consensus 151 rg~~~~~~~~~~~~g~~~g~~~g~~l----------------------~~~~~---~~~~-------------------- 185 (434)
T PRK15075 151 KGFYTSWQSASQQVAVVFAALLGYLL----------------------NQWLS---PAQM-------------------- 185 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH----------------------HHhCC---HHHH--------------------
Confidence 99999998777666654432211111 00000 0000
Q ss_pred HHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCccccc
Q 008597 234 LMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYH 313 (560)
Q Consensus 234 l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (560)
+..+....+... .+...+.+. .+ + . +++.++ ..+ +
T Consensus 186 --------~~~gWr~~f~~~-~~~~~~~~~------~~----~--~---------------~~e~~~------~~~-~-- 220 (434)
T PRK15075 186 --------AEWGWRIPFLIG-CLIVPFIFL------IR----R--S---------------LEETEE------FLA-R-- 220 (434)
T ss_pred --------hccchHHHHHHH-HHHHHHHHH------HH----H--h---------------cCCCHH------HHH-h--
Confidence 001111111100 000000000 00 0 0 000000 000 0
Q ss_pred CCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHH-hhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHH
Q 008597 314 ELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLC-GMGSGLATVNNISQIGES-LGYPTSAINSLVSLWS 391 (560)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~-~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~s 391 (560)
+ +++ + ....+++..|++..|.+.....+ .......+.++.|++.++ +|+++.++..+..+.+
T Consensus 221 ----~----------~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~ 284 (434)
T PRK15075 221 ----K----------HRP-S-MREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVG 284 (434)
T ss_pred ----h----------hcc-c-cccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 0 000 0 00113344566677765443332 222233445668888876 6998887777778899
Q ss_pred HhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHH-HHHHH--HhhcCc--chHHHHHHHHHhhhhccccchhhHHHH
Q 008597 392 IWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS-VGHIV--VASGFP--GNLYVGSIIVGVCYGCQWSLMPTITYE 466 (560)
Q Consensus 392 i~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~-~~~ll--l~~~~~--~~l~~~~~l~G~~~G~~~~l~p~i~~e 466 (560)
+++.+|++++|+++||+++|+ ..+ +...+.. ...+. .....+ ..+.+..++.|+++|...+.......|
T Consensus 285 ~~~~~~~~~~g~l~Dr~g~r~-----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e 358 (434)
T PRK15075 285 VSNFIWLPIGGALSDRIGRRP-----VLI-AFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTE 358 (434)
T ss_pred HHHHHHHHHHHHHHHHhcchH-----HHH-HHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 999999999999999997442 222 2222211 11111 111222 123333455677888777777788899
Q ss_pred hccCCchhhhhhHH-HhhhhhHHhhhhhhhhhhhccccc
Q 008597 467 IFGVGHMGTIFNTI-AIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 467 ~FG~k~~g~~yG~~-~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
.+..+..++..|+. +++..+++. ++|.+.|.+.|..|
T Consensus 359 ~~p~~~rg~~~g~~~~~~~~~~g~-~~p~~~g~i~~~~g 396 (434)
T PRK15075 359 VMPAEVRTAGFSLAYSLATAIFGG-FTPAISTWLIHVTG 396 (434)
T ss_pred HCCCCccchheeHHHHHHHHHHhh-hHHHHHHHHHHhcC
Confidence 99999999999885 445555443 57889999999876
No 57
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.73 E-value=6.1e-16 Score=161.66 Aligned_cols=363 Identities=12% Similarity=0.016 Sum_probs=214.2
Q ss_pred ccccccccHHHHhhcCC--ChhhhhHHHHHHhhhhh------hhhhHHHHHhhccccccccccccccCCcHHHHHHHHHH
Q 008597 29 TYTFGIYSSTLKSSQNY--DQSTLDTVSVFKDIGAN------VGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAIL 100 (560)
Q Consensus 29 ~Y~fs~ys~~l~~~~~~--s~~~~~~i~~~~~~g~~------~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~ 100 (560)
.|.++...+.+++++.+ +.++...+......+.. ..++.|.+.||+| +|+++.++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g--------------~r~~l~~~~~~ 74 (394)
T TIGR00883 9 FYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIG--------------RKKTLVITLLM 74 (394)
T ss_pred HHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhh--------------hHHHHHHHHHH
Confidence 35566677888888664 33444433322222221 2466788888876 89999999999
Q ss_pred HHHHHHHHHHHHhccCCCCc---HHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHH
Q 008597 101 CFAGYFLMWASVVGLIHSPP---VPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAY 176 (560)
Q Consensus 101 ~~~G~~~~~l~~~~~~~~~~---~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~ 176 (560)
..++..+....- .. .... .+.++..-++.|.|.+....++.....+++| ++||.+.++...+..+|..+-..+.
T Consensus 75 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 75 MGIGTLLIGLLP-SY-ATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred HHHHHHHHhhCC-Ch-hhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 999988753321 11 0000 1245556688899999888888888999996 5899999998888888877665332
Q ss_pred HHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHH
Q 008597 177 DTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFL 256 (560)
Q Consensus 177 ~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
..+. .. + .. +.. +..+....+.+. .+
T Consensus 153 ~~~~----------------------~~-~---~~---~~~------------------------~~~~w~~~~~~~-~~ 178 (394)
T TIGR00883 153 LLLS----------------------YL-L---GD---DAL------------------------LEWGWRIPFLVS-AV 178 (394)
T ss_pred HHHH----------------------Hh-c---CH---HHh------------------------hccchHHHHHHH-HH
Confidence 2110 00 0 00 000 000000000000 00
Q ss_pred HHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccccccccccc
Q 008597 257 FLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEED 336 (560)
Q Consensus 257 ~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (560)
..++.+.... ..+ + +++. . +++ + ++ +...
T Consensus 179 ~~~~~~~~~~--~~~----~-----------------~~~~-~---------~~~------~---------~~---~~~~ 207 (394)
T TIGR00883 179 LVLIGLYLRR--NLE----E-----------------TPVF-E---------KAQ------E---------KH---KKKR 207 (394)
T ss_pred HHHHHHHHHH--hcC----C-----------------ChhH-H---------HHH------h---------cc---cccc
Confidence 0000000000 000 0 0000 0 000 0 00 0001
Q ss_pred CcHHHHhcChh--HHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcC
Q 008597 337 MNILQSVCTLN--FWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 413 (560)
Q Consensus 337 ~t~~~~lkt~~--Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~ 413 (560)
.+.++.+|++. +|......++...........++.+. +.+|.++.+.+...++..+.+.++++++|+++||+++|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~- 286 (394)
T TIGR00883 208 GPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP- 286 (394)
T ss_pred CCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-
Confidence 23566777766 77777666665555555566778887 456888888888889999999999999999999996442
Q ss_pred CCchHHHHHHHHHHHHHHH-HH-hh--cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH-HhhhhhHH
Q 008597 414 WERPSFIAITLATMSVGHI-VV-AS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI-AIASPVGS 488 (560)
Q Consensus 414 ~~R~~~l~~~~~l~~~~~l-ll-~~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~-~~a~~~g~ 488 (560)
..+.........+.. +. .. +....+.+..++.|+++|..++.....+.|.++.++.++.+|+. .++..+|+
T Consensus 287 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~ 362 (394)
T TIGR00883 287 ----VLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFG 362 (394)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHh
Confidence 222222222222211 11 11 22334455667788999999999999999999999999999885 45556666
Q ss_pred hhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHH
Q 008597 489 YVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAF 529 (560)
Q Consensus 489 ~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~ 529 (560)
.++|.+.|.++|+.|. ++..++.+++.++
T Consensus 363 -~~~p~~~g~l~~~~g~-----------~~~~~~~~~~~~l 391 (394)
T TIGR00883 363 -GFAPYIAAALVAMTGD-----------WYAIGYYLAALAL 391 (394)
T ss_pred -hHHHHHHHHHHHHcCc-----------chhHHHHHHHHHH
Confidence 4788899999998763 5666666555443
No 58
>PRK10054 putative transporter; Provisional
Probab=99.73 E-value=2.9e-16 Score=167.95 Aligned_cols=363 Identities=11% Similarity=-0.003 Sum_probs=206.9
Q ss_pred hhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCC
Q 008597 11 SKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRG 89 (560)
Q Consensus 11 ~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~G 89 (560)
+.|..++..++. ..|....+...++.+++++|+|.+|+..+.....++..+ .++.|.+.||+|
T Consensus 8 ~~~~l~~~~~~~--~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g-------------- 71 (395)
T PRK10054 8 STSALLASSLLL--TIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFD-------------- 71 (395)
T ss_pred hHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------------
Confidence 345444444443 333444456667889999999999999766666565544 788999999986
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhh
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLG 168 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLs 168 (560)
+|.++.++.+...+++.++.. .++ ++.+....++.|.+.+....+...-..+.+| ++||.+.|+......+|
T Consensus 72 ~k~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg 144 (395)
T PRK10054 72 KKRYMLLAITAFASGFIAIPL-----VNN--VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIG 144 (395)
T ss_pred cchhHHHHHHHHHHHHHHHHH-----HhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHH
Confidence 788899999888888876422 122 3333333334444444333333333345564 46999999988888887
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccch
Q 008597 169 GAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPL 248 (560)
Q Consensus 169 a~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 248 (560)
.++-..+...+.+ .+...
T Consensus 145 ~~igp~l~~~l~~--------------------------------------------------------------~g~~~ 162 (395)
T PRK10054 145 WTVGPPLGTLLVM--------------------------------------------------------------QSINL 162 (395)
T ss_pred HHHHHHHHHHHHH--------------------------------------------------------------hccCc
Confidence 7766433222210 00011
Q ss_pred hHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccc
Q 008597 249 WARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDD 328 (560)
Q Consensus 249 ~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (560)
.+.......++.++. .....+ + +++++ + + + +
T Consensus 163 ~f~~~~~~~~i~~i~--~~~~~~----~----------------~~~~~-~---------~-~------~---------- 193 (395)
T PRK10054 163 PFWLAAICSAFPLVF--IQIWVQ----R----------------SEKAI-A---------T-E------T---------- 193 (395)
T ss_pred HHHHHHHHHHHHHHH--HHHHHh----c----------------ccccc-c---------c-c------h----------
Confidence 111110000010000 000010 0 00000 0 0 0 0
Q ss_pred ccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH---cCCCCcchhHHHHHHHHhhhhhccccccch
Q 008597 329 KKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES---LGYPTSAINSLVSLWSIWNFLGRFGGGYVS 405 (560)
Q Consensus 329 ~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~---lG~~~~~aa~lvSl~si~n~~GRl~~G~ls 405 (560)
+ + ..+.++.+|+++||.+.+..++............+++... .+.+....+...++.++.....+...|.+.
T Consensus 194 ~---~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 268 (395)
T PRK10054 194 G---S--VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRL 268 (395)
T ss_pred h---h--hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHH
Confidence 0 0 0123678899999988877766554433334445555432 344444445566666666666667777777
Q ss_pred hhhhhhcCCCchHHHHHHHHHHHHHHHHHhh--cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 406 DIVLHRMGWERPSFIAITLATMSVGHIVVAS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 406 D~~~~~~~~~R~~~l~~~~~l~~~~~lll~~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
||.++ +..+...+.+..++.+.+.. ++...+.+..++.|++++...+.....+.+.-..+..++.+|..+.
T Consensus 269 ~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~- 341 (395)
T PRK10054 269 NAANI------RPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQSL- 341 (395)
T ss_pred ccCCc------hhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHHH-
Confidence 77632 23344444555555544332 2333455567888888887666666778787777888888886543
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
..+|. .++|.+.|.++|+.| |...|.+.+....++.
T Consensus 342 ~~~G~-~~Gp~~~G~l~~~~g------------~~~~~~~~~~~~~~~~ 377 (395)
T PRK10054 342 GWLGA-AINPLVSGVILTTLP------------PWSLFVILALAIVAAW 377 (395)
T ss_pred HHHHH-HHHHHHHHHHHHHcC------------hhhHHHHHHHHHHHHH
Confidence 44566 478889999999986 6777777655444443
No 59
>PRK11043 putative transporter; Provisional
Probab=99.72 E-value=1.4e-15 Score=161.83 Aligned_cols=349 Identities=11% Similarity=0.026 Sum_probs=206.3
Q ss_pred hHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCc
Q 008597 12 KWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGP 90 (560)
Q Consensus 12 rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp 90 (560)
.|..+..+++.++.....+.+.-.-+++++++|++.+++..+..+..++..+ .++.|.+.||+| +
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g--------------~ 70 (401)
T PRK11043 5 KGFLVYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYG--------------R 70 (401)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcC--------------C
Confidence 4445555555444333333444344567899999999999888788888766 788999999986 8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC-CcceeeehhhhhhhhH
Q 008597 91 WVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY-GGTIVGIMKGFLGLGG 169 (560)
Q Consensus 91 ~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~-RG~a~Gi~~~~~GLsa 169 (560)
|.++.++.++..++.++... .+ +++.++..-++.|.|.+...........++||++ |+.+.+......++++
T Consensus 71 r~~~~~~~~~~~~~~~~~~~-----~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (401)
T PRK11043 71 KPVLLAGLSLFALGSLGMLW-----VE--SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSP 143 (401)
T ss_pred cHHHHHHHHHHHHHHHHHHH-----hc--CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 88999998888888877432 22 3555666667777877766665556667889875 5556566555555555
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchh
Q 008597 170 AALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLW 249 (560)
Q Consensus 170 ~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 249 (560)
++...+...+. +..+....
T Consensus 144 ~~g~~i~~~l~-------------------------------------------------------------~~~g~~~~ 162 (401)
T PRK11043 144 ALAPLLGAWLL-------------------------------------------------------------NHFGWQAI 162 (401)
T ss_pred HHHHHHHHHHH-------------------------------------------------------------hcCChHHH
Confidence 54432222110 01111111
Q ss_pred HHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccc
Q 008597 250 ARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDK 329 (560)
Q Consensus 250 ~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (560)
+.+.....++..+. .. ..+ +++++ . + + +
T Consensus 163 ~~~~~~~~~~~~~~--~~-~~~---------------------~~~~~-~-----------~------~----------~ 190 (401)
T PRK11043 163 FATLFAITLLLILP--TL-RLK---------------------PSKKA-R-----------K------Q----------S 190 (401)
T ss_pred HHHHHHHHHHHHHH--HH-HcC---------------------CCCCc-c-----------c------c----------c
Confidence 11111100111000 00 000 00000 0 0 0 0
Q ss_pred cccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhh
Q 008597 330 KLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 409 (560)
Q Consensus 330 ~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~ 409 (560)
.+..+.++.+|++++|...+.+.+.......+.+..+.+.++.|+++.+.+.......++..+|++..+++.||++
T Consensus 191 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~ 266 (401)
T PRK11043 191 ----QDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWG 266 (401)
T ss_pred ----hHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 0012457889999999877666665555555666778888888998877777777778888899999999999986
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhh
Q 008597 410 HRMGWERPSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPV 486 (560)
Q Consensus 410 ~~~~~~R~~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~ 486 (560)
+|+. .....+...+..+..++... +....+.+...+.|+++|..++.......|.+. ++.|...|+.+.....
T Consensus 267 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 342 (401)
T PRK11043 267 GEQL---LPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLG 342 (401)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHH
Confidence 4431 01111112222222222211 122234445667788888877776666667775 6889999998765555
Q ss_pred HHhhhhhhhhhhhcccc
Q 008597 487 GSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~ 503 (560)
++. .++.+.|.+.|..
T Consensus 343 ~~~-~~~~~~g~l~~~~ 358 (401)
T PRK11043 343 LCF-LASLLVSALISTP 358 (401)
T ss_pred HHH-HHHHHHHHccCCC
Confidence 553 5667888887743
No 60
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.72 E-value=2.2e-15 Score=157.74 Aligned_cols=176 Identities=13% Similarity=0.104 Sum_probs=124.4
Q ss_pred HHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 341 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 341 ~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
+.+|++++|.++...++..+.........+.+. +++|.++.+.+.+.++..+....+++..|+++||+++|+ .
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~------~ 267 (375)
T TIGR00899 194 GLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR------L 267 (375)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh------H
Confidence 467788898877666555443334445666666 457888888888888888888999999999999986432 2
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhh
Q 008597 420 IAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 498 (560)
Q Consensus 420 l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~ 498 (560)
+.+...+..+..++.. .++...+++..++.|+++|...+.....+.|.+. ++.++..++......+|. .+++.+.|.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~-~~g~~~~g~ 345 (375)
T TIGR00899 268 MLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRVGW-IIAGSVGGI 345 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 2333333333332222 2333445556677788888877777788888886 566788898877666777 478889999
Q ss_pred hcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 499 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 499 iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
+.|..| |+..|.+.+++++++.++..
T Consensus 346 ~~~~~g------------~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 346 LAERWS------------YHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHhcc------------chhHHHHHHHHHHHHHHHHh
Confidence 999865 99999999988888776544
No 61
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.72 E-value=1.2e-16 Score=164.77 Aligned_cols=324 Identities=17% Similarity=0.178 Sum_probs=211.0
Q ss_pred cccH-HHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHH
Q 008597 34 IYSS-TLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWAS 111 (560)
Q Consensus 34 ~ys~-~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~ 111 (560)
..-+ .+++++|+|.+|++.+..+..++..+ .++.|.+.||+| +|+++.++.++..++..+..
T Consensus 17 ~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--------------~r~~l~~~~~~~~~~~~~~~-- 80 (352)
T PF07690_consen 17 PALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFG--------------RRRVLIIGLLLFALGSLLLA-- 80 (352)
T ss_dssp HHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS---------------HHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------------CeeeEeehhhhhhhHHHHhh--
Confidence 3335 78899999999999888888887765 889999999987 88999999999999944432
Q ss_pred HhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHH
Q 008597 112 VVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLI 190 (560)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~ 190 (560)
+. + +.|.++...++.|.+.+..+.+......+++|+ +|+.+.|+..+..++|..+...+...+.+.
T Consensus 81 ~~---~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-------- 147 (352)
T PF07690_consen 81 FA---S--NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISY-------- 147 (352)
T ss_dssp HH---C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH--------
T ss_pred hh---h--hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhc--------
Confidence 22 2 356777888999999999999999999999987 899999999999999997775444433210
Q ss_pred HHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccc
Q 008597 191 LALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAI 270 (560)
Q Consensus 191 la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~ 270 (560)
.+....+.+.....++..++.... .
T Consensus 148 -----------------------------------------------------~~~~~~~~~~~~~~~~~~il~~~~--~ 172 (352)
T PF07690_consen 148 -----------------------------------------------------FGWRWAFLISAILSLIAAILFILF--L 172 (352)
T ss_dssp -----------------------------------------------------CHHCCHHHHHHHHHHHHHHHHHCC--C
T ss_pred -----------------------------------------------------cccccccccccchhhhhhhhHhhh--h
Confidence 000111111111111111110000 0
Q ss_pred ccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHH
Q 008597 271 KAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWL 350 (560)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwl 350 (560)
+ +.+ ++...+ ++++ .++ ++++ ...+ .+++..+++.+|.
T Consensus 173 ~----~~~----------------~~~~~~-------~~~~-----~~~-------~~~~--~~~~-~~~~~~~~~~~~~ 210 (352)
T PF07690_consen 173 P----EPP----------------PPRERE-------SPKE-----SES-------KKPK--PLKP-GFKSLFKNPVLWI 210 (352)
T ss_dssp -------S----------------TTTT---------SSTT-----TT---------HHH--CCCH--CTHHHHHHCCHH
T ss_pred h----hcc----------------cccccc-------cccc-----ccc-------cccc--cccc-ccccccccchhhh
Confidence 0 000 000000 0000 000 0000 0001 3577888898986
Q ss_pred HHHHHHHhhhhhhhhhhcHHHH-HHHcCCC-CcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 008597 351 LFVAMLCGMGSGLATVNNISQI-GESLGYP-TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 428 (560)
Q Consensus 351 l~~~~~~~~g~gl~~i~~~~~i-~~~lG~~-~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~ 428 (560)
++...++...........++.+ .+.+|.+ ..+.+...++.++...+++++.|+++||+++++ ... +......
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~-~~~~~~~ 284 (352)
T PF07690_consen 211 LLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-----RLL-IAILLLI 284 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-----HHH-HHHHHHH
T ss_pred hhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----HHH-HHHHHHH
Confidence 6555555544444456666776 4667888 677888899999999999999999999986432 222 2222222
Q ss_pred HHHHHH---hh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHh
Q 008597 429 VGHIVV---AS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 489 (560)
Q Consensus 429 ~~~lll---~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ 489 (560)
+..+.+ .. .++...++..++.|+++|..++.....+.|.++.++.|+.+|+..+...+|..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ 349 (352)
T PF07690_consen 285 LGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI 349 (352)
T ss_dssp HHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 222222 11 22344556788899999999999999999999999999999999887777764
No 62
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.71 E-value=2.9e-15 Score=158.94 Aligned_cols=122 Identities=11% Similarity=0.041 Sum_probs=94.8
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
+.+..+-|.+++++|.|.++...+.....++..+ .++.|.+.||+| +|+.+++|.+...+++.+.
T Consensus 20 ~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g--------------~r~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 20 DMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSG--------------RKPVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhC--------------ChHHHHHHHHHHHHHHHHH
Confidence 3444778999999999999998777777777766 678999999986 7889999999999988874
Q ss_pred HHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHH
Q 008597 109 WASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAAL 172 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~ 172 (560)
... + +++.++...++.|.+.+..+........+++| ++|+.+.|+..+...+++.+.
T Consensus 86 ~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~ 143 (392)
T PRK10473 86 SLA-----E--TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLA 143 (392)
T ss_pred HHh-----C--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 321 2 34455555677888888888888888889996 689999998877766665544
No 63
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.70 E-value=5.7e-15 Score=156.82 Aligned_cols=175 Identities=10% Similarity=-0.007 Sum_probs=134.9
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCch
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~ 417 (560)
+.++.+|+|+||.+.+..++...+-..+.++.+++.+++|.++...+.+.++..+...++.+.+|.+.||++.|
T Consensus 197 ~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~------ 270 (382)
T TIGR00902 197 AFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR------ 270 (382)
T ss_pred hHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH------
Confidence 35789999999999888777666666677788888899999998888888889999999999888888887532
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH-hhhhhHHhhhhhhh
Q 008597 418 SFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA-IASPVGSYVCSVRI 495 (560)
Q Consensus 418 ~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~-~a~~~g~~ll~~~l 495 (560)
..+.+.....++...+.. .+++..+++..++-|+++|..+......+.+. ..+++++..++.+ ++..+|. ..++.+
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~-~~g~~~ 348 (382)
T TIGR00902 271 DLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLI-AIFTAF 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 344555566666655544 34445567778999999999999998889887 6677787777764 4566777 467889
Q ss_pred hhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 496 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 496 ~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
.|+++|+.| + ..|.+++++.+++.+
T Consensus 349 ~G~l~~~~g------------~-~~~~~~~~~~~~~~~ 373 (382)
T TIGR00902 349 AGFIYPTLG------------A-GTFVFMAIIAAAAFF 373 (382)
T ss_pred HHHHHHhcc------------H-HHHHHHHHHHHHHHH
Confidence 999999875 4 668888877766543
No 64
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.69 E-value=1.4e-14 Score=154.21 Aligned_cols=181 Identities=13% Similarity=0.122 Sum_probs=123.9
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc----CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcC
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL----GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 413 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l----G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~ 413 (560)
+.+|.+|++++|.+.+..++.........+..+.+.++. +.+....+...++.++.+.++.+..|++.||+++|+
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~- 285 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKN- 285 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-
Confidence 358899999999876655443322222334455565543 333444567778889999999999999999996442
Q ss_pred CCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhH-HHhhhhhHHhhh
Q 008597 414 WERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNT-IAIASPVGSYVC 491 (560)
Q Consensus 414 ~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~-~~~a~~~g~~ll 491 (560)
.+.+...+.+++..+.. .+++..+++..++.|++++......-..+.+.++.+..++.++. ......+|.. +
T Consensus 286 -----~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~-~ 359 (396)
T TIGR00882 286 -----ALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMI-F 359 (396)
T ss_pred -----hHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHH-H
Confidence 33444455555554433 34555566667777888766555555566777888888877766 3455667774 6
Q ss_pred hhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 492 SVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 492 ~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
++.+.|+++|..| |+.+|.+.+++.++..+++..
T Consensus 360 ~~~l~G~l~~~~G------------~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 360 LSTLAGNMYDSIG------------FQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHhHHHHHHhcc------------cHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999876 999999999988887776653
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.68 E-value=1.5e-14 Score=156.97 Aligned_cols=369 Identities=13% Similarity=0.093 Sum_probs=223.7
Q ss_pred ccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHH
Q 008597 31 TFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMW 109 (560)
Q Consensus 31 ~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~ 109 (560)
.-+.+-|++++.+|+|.+|...+.....++..+ .++.|.+.||+| +|+++.+|.+++.+|..+..
T Consensus 44 ~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G--------------~r~~l~~g~~~~~~~~~l~~ 109 (438)
T PRK10133 44 LNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLS--------------YKAGIITGLFLYALGAALFW 109 (438)
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------cHHHHHHHHHHHHHHHHHHH
Confidence 345567999999999999999888888888876 788999999987 99999999999999997742
Q ss_pred HHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCc-ceeeehhhhhhhhHHHHHHHHHHhcCCCchhHH
Q 008597 110 ASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGG-TIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYL 188 (560)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG-~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fl 188 (560)
.. .. .++++.++..-++.|.|.+..++++-....++.|++|+ ...++..+..++|+.+-..+...+.
T Consensus 110 ~~--~~--a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~-------- 177 (438)
T PRK10133 110 PA--AE--IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI-------- 177 (438)
T ss_pred HH--Hh--cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 21 11 13466777788999999999999988877777777665 4688888888888777643322111
Q ss_pred HHHHHHhHHHHHhhheeeeecCCCC-------CccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHH
Q 008597 189 LILALLPTFASLLFMSLVRIHGTNS-------ADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFL 261 (560)
Q Consensus 189 l~la~~~~~v~~~~~~~ir~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l 261 (560)
....|... ..+...-.+.... .+....+.....+..+++
T Consensus 178 -----------------~~~~~~~~~~~~~~l~~~~~~~w~~~~~-----------------~~w~~~f~~~~~v~~~~~ 223 (438)
T PRK10133 178 -----------------LSNVPHQSQDVLDKMTPEQLSAYKHSLV-----------------LSVQTPYMIIVAIVLLVA 223 (438)
T ss_pred -----------------hcCCcccchhhhhccChhhHHHHHHHHH-----------------HHHHHHHHHHHHHHHHHH
Confidence 00000000 0000000000000 000000000000111111
Q ss_pred hhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHH
Q 008597 262 LSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQ 341 (560)
Q Consensus 262 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~ 341 (560)
+.. .....| +.+++ + +.+ + +.. +. -.+.++
T Consensus 224 ~~~-~~~~~p---------------------~~~~~-~---------~~~------~---------~~~--~~-~~~~~~ 253 (438)
T PRK10133 224 LLI-MLTKFP---------------------ALQSD-N---------HSD------A---------KQG--SF-SASLSR 253 (438)
T ss_pred HHH-HHhcCC---------------------CCCcc-c---------ccc------c---------ccc--ch-hhhHHH
Confidence 110 000000 00000 0 000 0 000 00 012467
Q ss_pred HhcChhHHHHHHHHHHhhhhhhhhhhcHHHHH-H-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 342 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-E-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 342 ~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~-~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
.+|+|.||...+..++..+......+..+++. + ..|+++.+++..++.+.++..+||+..|++.||+++|+ .
T Consensus 254 ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~------~ 327 (438)
T PRK10133 254 LARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK------V 327 (438)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------H
Confidence 89999999877766665554444455666664 4 46999999999999999999999999999999996432 2
Q ss_pred HHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 420 IAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 420 l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
+.....+.++.+++........-.....+.|++.|..++..-+...+.++ |+.++.=+++.+.. +|.. +.+++.|.+
T Consensus 328 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~glg~~~i~P~~~s~a~~~~~-~~~~~as~l~~~~~-~g~~-~~~~i~G~l 404 (438)
T PRK10133 328 LAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGIKNLG-QDTKYGSSFIVMTI-IGGG-IVTPVMGFV 404 (438)
T ss_pred HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHcccc-hhhccchhHHhHHh-ccch-HHHHHHHHH
Confidence 33333333333332222111122445678899999999999999999988 55666667665433 4543 566889999
Q ss_pred cccccCCCCCcccCccccHHHHHHHHHHHH
Q 008597 500 YDNVASGEGNSCNGTHCFMLSFLIMASVAF 529 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f~i~~~l~~ 529 (560)
.|..|. .+.+|++...+.+
T Consensus 405 ~~~~g~-----------~~~~~~v~~~~~~ 423 (438)
T PRK10133 405 SDAAGN-----------IPTAELIPALCFA 423 (438)
T ss_pred HHhccc-----------hHHHHHHHHHHHH
Confidence 997652 5677776554433
No 66
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.68 E-value=1.3e-14 Score=159.93 Aligned_cols=358 Identities=11% Similarity=0.043 Sum_probs=206.4
Q ss_pred HHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCcHH-HHHHHHHHHHHHHHHHHHHHhcc
Q 008597 37 STLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWV-VHLTGAILCFAGYFLMWASVVGL 115 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~-~~~~g~~~~~~G~~~~~l~~~~~ 115 (560)
+...++.|.+.+|+..++..... ..+.++.|.+.||+.. .|+|.|. .+.++.+...++..++.. ...
T Consensus 36 ~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~---------~~~Grrr~~ll~~~i~~~~~~~~~a~--~~~ 103 (491)
T PRK11010 36 QAWMTVENIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTP---------PFLGRRRGWLLATQLLLLVAIAAMGF--LEP 103 (491)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccc---------cCCCCchHHHHHHHHHHHHHHHHHHH--cCC
Confidence 44455567777777755433322 2357889999999831 1123444 355666666666655321 111
Q ss_pred CCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHH
Q 008597 116 IHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALL 194 (560)
Q Consensus 116 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~ 194 (560)
..+++.+....++.+.+.+..+.+.-....+||| ++||.+.|+...+..+|..+-+.+...+.+.
T Consensus 104 --~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~------------ 169 (491)
T PRK11010 104 --GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADR------------ 169 (491)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 1235556656667778888888888888899997 7899999999998888877765433322110
Q ss_pred hHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccccccc
Q 008597 195 PTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQR 274 (560)
Q Consensus 195 ~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~ 274 (560)
..+....+.+.....++..+. .. ..+
T Consensus 170 ------------------------------------------------~~GWr~~f~i~a~l~ll~~l~--~~-~~~--- 195 (491)
T PRK11010 170 ------------------------------------------------YLGWQGMYWLMAALLIPCIIA--TL-LAP--- 195 (491)
T ss_pred ------------------------------------------------ccCHHHHHHHHHHHHHHHHHH--HH-hcC---
Confidence 000000111111000000000 00 010
Q ss_pred ccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHH
Q 008597 275 EDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVA 354 (560)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~ 354 (560)
|+++..+ ++ + +. + +.....+++.++++.+|.+...
T Consensus 196 -------------------e~~~~~~-------~~-~------~~---------~---~~~~~~l~~~~~~~~~~~~ll~ 230 (491)
T PRK11010 196 -------------------EPTDTIP-------VP-K------TL---------E---QAVVAPLRDFFGRNNAWLILLL 230 (491)
T ss_pred -------------------CCccccc-------cc-c------ch---------h---hhHHHHHHHHHcCcCHHHHHHH
Confidence 0000000 00 0 00 0 0001235678888888876655
Q ss_pred HHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHH-HHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHH-
Q 008597 355 MLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVS-LWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGH- 431 (560)
Q Consensus 355 ~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvS-l~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~- 431 (560)
.++.........+..+++. +.+|+++++.+...+ +..++..+|.+++|+++||+++|+ .. .+...+.+++.
T Consensus 231 ~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-----~l-~i~~~l~~l~~l 304 (491)
T PRK11010 231 IVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR-----AL-MIFGILQGVSNA 304 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-----HH-HHHHHHHHHHHH
Confidence 4433322223344556665 458999888888774 556899999999999999997542 22 22222222222
Q ss_pred --HHHhhcC-c-chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCC
Q 008597 432 --IVVASGF-P-GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 507 (560)
Q Consensus 432 --lll~~~~-~-~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~ 507 (560)
.++.... + ..+....++..++.|..++...++..+....+..++.||+.+....+|.. +.+++.|.++|..|
T Consensus 305 ~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~-~~~~~~G~l~~~~G--- 380 (491)
T PRK11010 305 GYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRV-YVGPVAGWFVEAHG--- 380 (491)
T ss_pred HHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhC---
Confidence 2222211 1 12333344434444444444566667777778889999999887888885 55678999999876
Q ss_pred CCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 508 GNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 508 ~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
|+..|.+.+++++.+.++...+
T Consensus 381 ---------~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 381 ---------WPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred ---------hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998887766655
No 67
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.68 E-value=7.5e-16 Score=167.96 Aligned_cols=368 Identities=14% Similarity=0.140 Sum_probs=251.2
Q ss_pred HhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 008597 40 KSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHS 118 (560)
Q Consensus 40 ~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~ 118 (560)
+.+++||.+|-+.+=.+...|..+ -+++|.++||+| .|.++.+++++-.++.++.=++..-
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G--------------~r~v~~~~~~~sa~~t~l~P~aa~~---- 126 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFG--------------ARRVFFISGLISALLTLLTPLAASI---- 126 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcC--------------chHHHHHHHHHHHHHHHHHHHHHHh----
Confidence 568999999999887788899888 567899999987 8999999999999998886333221
Q ss_pred CcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHH
Q 008597 119 PPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTF 197 (560)
Q Consensus 119 ~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~ 197 (560)
+.+.++..=++.|.+.+..+++.-.-..||.| ++|++..+++.++.-+|..+--++...+.
T Consensus 127 -~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc----------------- 188 (466)
T KOG2532|consen 127 -GFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLC----------------- 188 (466)
T ss_pred -cchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHh-----------------
Confidence 23455667789999999999999999999997 68999999999999888877754443332
Q ss_pred HHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccc
Q 008597 198 ASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDT 277 (560)
Q Consensus 198 v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~ 277 (560)
++..|.+..+++.+.+.++..++.-... .|.
T Consensus 189 -------------------------------------------~s~~GW~sifY~~g~~g~i~~~~w~~~~------~d~ 219 (466)
T KOG2532|consen 189 -------------------------------------------ESSLGWPSIFYVFGIVGLIWFILWFLFY------SDS 219 (466)
T ss_pred -------------------------------------------ccCCCCchHHHHHHHHHHHHHHHHHHHh------cCC
Confidence 1235666666665555444433322211 010
Q ss_pred cCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHH
Q 008597 278 TRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLC 357 (560)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~ 357 (560)
. ++++...+.|- +.-+ .+.. ++..++..+..+++++|++.+|.+|+..++
T Consensus 220 P--------~~h~~is~~El--------~~I~------~~k~--------~~~~~~~~~vP~~~i~ts~~vwai~~~~f~ 269 (466)
T KOG2532|consen 220 P--------SKHPNISEKEL--------KYIE------KGKS--------EAHVKKKPPVPYKAILTSPPVWAIWISAFG 269 (466)
T ss_pred c--------ccCCCCCHHHH--------HHHH------hccc--------ccccCCCCCCCHHHHHcCHHHHHHHHHHHH
Confidence 0 00111100000 0000 0000 000011135678999999999999999999
Q ss_pred hhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCC----CchHHHHHHHHHHHHHHH
Q 008597 358 GMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW----ERPSFIAITLATMSVGHI 432 (560)
Q Consensus 358 ~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~----~R~~~l~~~~~l~~~~~l 432 (560)
....-.+....+|.+.++ +|++..+.+.+.++.-+...+-++++|.++||+.+| .. .|+.+-.+++...++.++
T Consensus 270 ~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~ 348 (466)
T KOG2532|consen 270 GNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLL 348 (466)
T ss_pred HHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHH
Confidence 988888888999998875 699999999999999999999999999999999775 33 345555666666666665
Q ss_pred HHhh-cC-cc--h---HHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 433 VVAS-GF-PG--N---LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 433 ll~~-~~-~~--~---l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
.+.. +. .. . +.++..+.|+..++... ....-.++|.+...|+.+....+..+ ++|.+.|.+.. +.+
T Consensus 349 ~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~-----~~~~~apq~a~~l~g~~~~~~~~~~~-~~P~~vg~~~~-~~t 421 (466)
T KOG2532|consen 349 VLAFTSDEHRLLAVILLTIAIGLSGFNISGFYK-----NHQDIAPQHAGFVMGIINFVGALAGF-IAPLLVGIIVT-DNT 421 (466)
T ss_pred eeeecCCCcchHHHHHHHHHHHHcccchhhhHh-----hhhhccchHHHHHHHHHHHHHHHHHH-HHHHheeeEeC-CCC
Confidence 5442 21 12 1 22223444444444332 11112668999999999887787774 78889998884 212
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
.+-++..|++.+++.+++.+.-.+.
T Consensus 422 --------~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 422 --------REEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred --------HHHHHHHHHHHHHHHHHhchheeEe
Confidence 2349999999999998888544333
No 68
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.67 E-value=3.4e-14 Score=150.82 Aligned_cols=175 Identities=14% Similarity=0.030 Sum_probs=122.8
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCch
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~ 417 (560)
+.++.+|++.||.+....++.......+.+..+++.++.|.++.+.+.+.++..+.+.++++..|++.||++++
T Consensus 197 ~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~------ 270 (382)
T PRK11128 197 AWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR------ 270 (382)
T ss_pred hHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH------
Confidence 46899999999988776655544433455677788888999988888888888889999999999998887532
Q ss_pred HHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH-hhhhhHHhhhhhhh
Q 008597 418 SFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA-IASPVGSYVCSVRI 495 (560)
Q Consensus 418 ~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~-~a~~~g~~ll~~~l 495 (560)
..+.+.....+++.+++. .+++..+++..++.|+++|......-..+.+. ...+.++..+... ++..+|. .+++.+
T Consensus 271 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~-~ig~~i 348 (382)
T PRK11128 271 DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSI-AIMTVL 348 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHH-HHHHHH
Confidence 334455555555555443 34555667788888999997666555555565 3455677777764 4444554 367889
Q ss_pred hhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 496 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 496 ~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
.|.++|+.| + ..|++++++.+++++
T Consensus 349 ~G~l~~~~g------------~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 349 SGFLYQHLG------------A-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHhcc------------H-HHHHHHHHHHHHHHH
Confidence 999999875 3 467777766655543
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.65 E-value=3.5e-14 Score=149.25 Aligned_cols=324 Identities=9% Similarity=-0.045 Sum_probs=189.9
Q ss_pred ccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHH
Q 008597 31 TFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMW 109 (560)
Q Consensus 31 ~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~ 109 (560)
.|.-.-+.+.+++|+|.+|.+.+..+..++..+ .++.|.+.||+| +|.++.+|.++..++..+..
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--------------~~~~~~~~~~~~~i~~~~~~ 74 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFG--------------RKPVILGGTLVFALAAVACA 74 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcC--------------ChHHHHHHHHHHHHHHHHHH
Confidence 344555788889999999999877777777766 788899999986 88899999999888888753
Q ss_pred HHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCC-CchhH
Q 008597 110 ASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKG-RPSTY 187 (560)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~-~~~~f 187 (560)
.. + .++.+....++.|.+.+..+........+++|+ +||.+.|+...+.++|..+-..+...+.+. +...
T Consensus 75 ~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~- 146 (377)
T PRK11102 75 LA-----Q--TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHA- 146 (377)
T ss_pred HH-----c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHH-
Confidence 32 2 245566667788888888888888888899985 699999999888888877665443322110 0000
Q ss_pred HHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 188 LLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 188 ll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
.+ . +.....++..+....
T Consensus 147 ----------------------------------~~----------~-----------------~~~~~~~~~~~~~~~- 164 (377)
T PRK11102 147 ----------------------------------IF----------W-----------------VLALAAILAAALVFF- 164 (377)
T ss_pred ----------------------------------HH----------H-----------------HHHHHHHHHHHHHHH-
Confidence 00 0 000000000000000
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
..+ + . +++++ +++ .+ . +....+.++.+|+++
T Consensus 165 -~~~----~--~---------------~~~~~---------~~~-----~~----------~---~~~~~~~~~~~~~~~ 195 (377)
T PRK11102 165 -FIP----E--T---------------LPKER---------RQP-----FH----------L---RTTIRNFASLFRHKR 195 (377)
T ss_pred -hCC----c--c---------------Ccccc---------cCC-----CC----------h---HHHHHHHHHHHcChH
Confidence 000 0 0 00000 000 00 0 000123467889999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
+|...+..++.......+....+.+.+ ..|.++.+.+.+.++.++...+++++.|++.||+++|+ .+.....+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~------~~~~~~~~ 269 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN------MLRFGLWI 269 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH------HHHHHHHH
Confidence 998766665554444455556666655 46899888899999999999999999999999996543 22222222
Q ss_pred H---HHHHHHHh-hc-CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHh-hhhhHHhhhhhhh
Q 008597 427 M---SVGHIVVA-SG-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSYVCSVRI 495 (560)
Q Consensus 427 ~---~~~~lll~-~~-~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~-a~~~g~~ll~~~l 495 (560)
. .+..+... .+ ....+.+...+.+...+......-..+.|... ++.+...++... ...+|+ +.++.+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~-~~g~~~ 342 (377)
T PRK11102 270 QFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGA-IVGALL 342 (377)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHH-HHHHHH
Confidence 2 22211111 11 11222333334444444434344445566665 677777777643 234444 344433
No 70
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.64 E-value=8.7e-14 Score=147.78 Aligned_cols=328 Identities=9% Similarity=-0.034 Sum_probs=187.1
Q ss_pred cccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHH
Q 008597 32 FGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWA 110 (560)
Q Consensus 32 fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l 110 (560)
+...-|.+.+++|+|..+...+..+..++..+ .++.|.+.||+| +|+++.++.++..++..+...
T Consensus 27 ~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g--------------rr~~~~~~~~~~~~~~~~~~~ 92 (394)
T PRK11652 27 YVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVG--------------RRPVILVGMSIFILGTLVALF 92 (394)
T ss_pred HhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcC--------------ChHHHHHHHHHHHHHHHHHHH
Confidence 33345778899999999999777777777766 688999999986 888999999888888877432
Q ss_pred HHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHH
Q 008597 111 SVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLL 189 (560)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll 189 (560)
. .+++.++..-++.|.+.+.....+.....+++| ++|+.+.++...+..++..+-..+...+.+
T Consensus 93 ~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-------- 157 (394)
T PRK11652 93 A-------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-------- 157 (394)
T ss_pred H-------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------
Confidence 1 235566666777888877666655555566777 567877777655555554443322211110
Q ss_pred HHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccc
Q 008597 190 ILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIA 269 (560)
Q Consensus 190 ~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~ 269 (560)
..+....+.+.....++..+.. ...
T Consensus 158 -----------------------------------------------------~~g~~~~f~~~~~~~~~~~~~~--~~~ 182 (394)
T PRK11652 158 -----------------------------------------------------LFGWRACYLFLLLLGAGVTFSM--ARW 182 (394)
T ss_pred -----------------------------------------------------ccChHHHHHHHHHHHHHHHHHH--HHh
Confidence 0010111111000000000000 000
Q ss_pred cccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHH
Q 008597 270 IKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFW 349 (560)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fw 349 (560)
.| + +++. + + + ++ + .....++.+|++.+|
T Consensus 183 ~~----~-----------------~~~~-~-----------~------~---------~~---~-~~~~~~~~~~~~~~~ 210 (394)
T PRK11652 183 MP----E-----------------TRPA-D-----------A------R---------RT---R-VLASYRTLLSNRRFN 210 (394)
T ss_pred CC----c-----------------cCcc-c-----------c------c---------hh---H-HHHHHHHHHcChHHH
Confidence 00 0 0000 0 0 0 00 0 012346788999998
Q ss_pred HHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 008597 350 LLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 428 (560)
Q Consensus 350 ll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~ 428 (560)
......++............+.+.++ +|.++.+.+.+.....++..+|.++.+.+.||.++ +.........+..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~-----~~~~~~~~~~~~~ 285 (394)
T PRK11652 211 CYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST-----LMWQSVICCLLAG 285 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHH
Confidence 76654443322222223334556665 68887766666666666666666666666666541 1111111111111
Q ss_pred HHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccc
Q 008597 429 VGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 502 (560)
Q Consensus 429 ~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~ 502 (560)
+..+.... .....+....++.|++.|..++.......|.+. ++.|+..++......+|.. +++.++|.+.+.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~-~~~~~~~~~~~~ 360 (394)
T PRK11652 286 LLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSG-LAALLSAMLPQT 360 (394)
T ss_pred HHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHH-HHHHHHHHccCC
Confidence 21122211 122345566788889999888778877788885 7889999999877777774 677778877654
No 71
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.63 E-value=6.3e-14 Score=168.92 Aligned_cols=179 Identities=10% Similarity=0.083 Sum_probs=130.8
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
.++...+++.+|.+.+.+++....+.++..+++.+.++ +|.++...+.+.+.++++..+|.++.|+++|+..+++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~---- 292 (1140)
T PRK06814 217 LLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL---- 292 (1140)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee----
Confidence 46778899999999888877776666677788888876 5888888999999999999999999999998764322
Q ss_pred hHHHHHHHHHHHHHHH-HHhh--------------------cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhh
Q 008597 417 PSFIAITLATMSVGHI-VVAS--------------------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT 475 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~l-ll~~--------------------~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~ 475 (560)
.. ....++.++..+ +... .+...+++..+++|++.|......++++.+.+..++.|.
T Consensus 293 -~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~ 370 (1140)
T PRK06814 293 -YV-PIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRAR 370 (1140)
T ss_pred -ee-hHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccccee
Confidence 11 111111111111 1110 233445667888999999999899999999999999999
Q ss_pred hhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 476 IFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 476 ~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
.+|+.++...+|. .+++.+.|.++|...+ +...|++++.++++.+++
T Consensus 371 v~g~~~~~~~~~~-~ig~~~~g~l~~~~~~-----------~~~~~~~~~~~~~~~~~~ 417 (1140)
T PRK06814 371 VIAANNVLNAAFM-VAGTIILALLQALGFS-----------IPWIILFIALANLIVAIL 417 (1140)
T ss_pred eeHHHHHHHHHHH-HHHHHHHHHHHHhccC-----------HHHHHHHHHHHHHHHHHH
Confidence 9999988777776 4777888998875432 777777666655444433
No 72
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.63 E-value=3.1e-14 Score=152.83 Aligned_cols=158 Identities=13% Similarity=0.078 Sum_probs=108.9
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHH-HHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCC
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQI-GES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 415 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~ 415 (560)
.+++.+|++.||.+....++....... .+...++ .+. ++ ++...+.+.++..+...++.+++|+++||+++|+
T Consensus 214 ~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~--- 288 (437)
T TIGR00792 214 IFKALFKNDQLLILCLAYLFYNLAFNI-KNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI--- 288 (437)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHHH-HcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH---
Confidence 357789999999987776665443332 2333333 332 23 3445566777889999999999999999996442
Q ss_pred chHHHHHHHHHHHHHHHHHhh--cCcchHHHHHHHHHhhhhccccchhhHHHHhc-------cCCchhhhhhHHHhhhhh
Q 008597 416 RPSFIAITLATMSVGHIVVAS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-------GVGHMGTIFNTIAIASPV 486 (560)
Q Consensus 416 R~~~l~~~~~l~~~~~lll~~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~F-------G~k~~g~~yG~~~~a~~~ 486 (560)
.+.+...+.+++.+++.. ++...+.+..++.|++.|..+....++++|.. |.++.|..+|+.++..-+
T Consensus 289 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~ 365 (437)
T TIGR00792 289 ---LFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL 365 (437)
T ss_pred ---HHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH
Confidence 333444455555543332 22234555677889999998888888888874 677889999999887777
Q ss_pred HHhhhhhhhhhhhccccc
Q 008597 487 GSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~g 504 (560)
|. .+++.+.|.+.|..|
T Consensus 366 g~-~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 366 GQ-ALAGFLVGLILGIIG 382 (437)
T ss_pred HH-HHHHHHHHHHHHHcC
Confidence 77 477888999988765
No 73
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.63 E-value=3.9e-14 Score=148.20 Aligned_cols=324 Identities=13% Similarity=-0.007 Sum_probs=191.5
Q ss_pred HHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCcHHH-HHHHHHHHHHHHHHHHHHHhcc
Q 008597 37 STLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVV-HLTGAILCFAGYFLMWASVVGL 115 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~-~~~g~~~~~~G~~~~~l~~~~~ 115 (560)
+.+.++.|+|.+|+..+++..... .+.++.|++.||++. +|+|+|+. ++++.+...+....+. +...
T Consensus 12 ~~~~~~~g~s~~~~g~~~~~~~~~-~~~~~~g~~~Dr~~~---------~~~Grr~~~l~~~~~~~~~~~~~l~--~~~~ 79 (356)
T TIGR00901 12 PYWLRSKNVSLKTIGFFSLVGLPY-SLKFLWSPLVDTVYL---------PFFGRRRSWLVLTQVLLLSLLLILS--FLVP 79 (356)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHH-HHHHHHHHHHhcccC---------CCCCccHHHHHHHHHHHHHHHHHHH--cCCc
Confidence 777888999999999777554333 348899999999841 12456665 4556666555544431 1111
Q ss_pred CCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHH
Q 008597 116 IHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALL 194 (560)
Q Consensus 116 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~ 194 (560)
..++|.+....++.+...+..+.+.-.-..+++| ++||.+.|+...++.+|..+-+.+...+.
T Consensus 80 --~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~-------------- 143 (356)
T TIGR00901 80 --STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLA-------------- 143 (356)
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHh--------------
Confidence 1235555555666677777778877788889995 68999999999999988877754443221
Q ss_pred hHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccccccc
Q 008597 195 PTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQR 274 (560)
Q Consensus 195 ~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~ 274 (560)
...+.+ +..+. ..+. .+- ..++..++ ........
T Consensus 144 ------------~~~g~~--~~~~~--~wr~-----------------------~f~-i~ai~~l~--~~~~~~~~---- 177 (356)
T TIGR00901 144 ------------SPEFAN--TGLIT--LWGY-----------------------IFF-WTALLILP--GLLVTLFL---- 177 (356)
T ss_pred ------------hhcccc--ccccc--ccHH-----------------------HHH-HHHHHHHH--HHHHHHHh----
Confidence 000000 00000 0000 000 00000000 00000000
Q ss_pred ccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh---HHHH
Q 008597 275 EDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN---FWLL 351 (560)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~---Fwll 351 (560)
. +|+++.. +++ ++ +++ +. ..++++.+|++. +|.+
T Consensus 178 -~----------------~e~~~~~---------~~~------~~--------~~~--~~-~~~~~~~~~~~~~~~~~~~ 214 (356)
T TIGR00901 178 -A----------------KEPQEDA---------SVP------KP--------LTQ--AV-LKPIREFFQRKNMIQALLL 214 (356)
T ss_pred -c----------------cCCCccc---------ccc------hh--------HHH--HH-HHHHHHHHHhcCchHHHHH
Confidence 0 0000000 000 00 000 00 124566777775 7777
Q ss_pred HHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHH-HhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 008597 352 FVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWS-IWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVG 430 (560)
Q Consensus 352 ~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~s-i~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~ 430 (560)
.+..++............+++.+++|+++++.+.+.++.+ +...+|.+++|+++||+++|+ . +.....+.+++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-----~-l~~~~~~~~~~ 288 (356)
T TIGR00901 215 LLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY-----A-LLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH-----H-HHHHHHHHHHH
Confidence 6666555554445567788888889999888887777666 578899999999999997543 2 33333333343
Q ss_pred HHHHh---hc---------CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 431 HIVVA---SG---------FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 431 ~lll~---~~---------~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
..++. .+ ....+....++.+++.|..++...++..|.+..++.|+.+|+.+..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~ 353 (356)
T TIGR00901 289 NAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSL 353 (356)
T ss_pred HHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHH
Confidence 33221 11 1223444566779999999999999999999999999999998653
No 74
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.62 E-value=1.2e-13 Score=147.70 Aligned_cols=364 Identities=12% Similarity=0.007 Sum_probs=208.3
Q ss_pred HhcCccccccccc-HHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCc-HHHHHHHHHHH
Q 008597 24 CCSGATYTFGIYS-STLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGP-WVVHLTGAILC 101 (560)
Q Consensus 24 ~~~G~~Y~fs~ys-~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp-~~~~~~g~~~~ 101 (560)
...|.+|.|..-. |..-++.|+|.+|+..++..... -.+.++.|.+.||++. ++.|. |..+.++.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~---------~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 9 FASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTP---------PLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccc---------cCCCcchhHHHHHHHHH
Confidence 4455666665544 44445569999999977666654 3568999999999831 00123 34566666666
Q ss_pred HHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC-CcceeeehhhhhhhhHHHHHHHHHHhc
Q 008597 102 FAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY-GGTIVGIMKGFLGLGGAALIQAYDTIW 180 (560)
Q Consensus 102 ~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~-RG~a~Gi~~~~~GLsa~i~s~i~~~~f 180 (560)
.++..++... .. ..++|.+....++.+...+..+.+.-....+++|++ ||.+.++...++++|..+-..+...+.
T Consensus 79 ~l~~~~l~~~--~~--~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~ 154 (402)
T PRK11902 79 AASIAAMAFC--PP--HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLA 154 (402)
T ss_pred HHHHHHHHhc--Cc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 6666654222 11 123566666666667777788888888889999865 999999999988888776653322221
Q ss_pred CCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHH
Q 008597 181 KGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLF 260 (560)
Q Consensus 181 ~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (560)
+ ...+....+.+..+..++.
T Consensus 155 ~------------------------------------------------------------~~~gw~~~f~i~a~~~l~~ 174 (402)
T PRK11902 155 D------------------------------------------------------------RVLGWGNTYLLMAGLMLAG 174 (402)
T ss_pred h------------------------------------------------------------cccCHHHHHHHHHHHHHHH
Confidence 0 0001111111111111111
Q ss_pred HhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHH
Q 008597 261 LLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNIL 340 (560)
Q Consensus 261 ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 340 (560)
.+ +.. ..+ +|+.... ++ + +. . +....+.+
T Consensus 175 ~l--~~~-~~~----------------------e~~~~~~-------~~-~------~~---------~---~~~~~~~~ 203 (402)
T PRK11902 175 AL--TTL-WAP----------------------EPEVPAR-------PP-R------SL---------G---EAVVGPLR 203 (402)
T ss_pred HH--HHH-hcC----------------------CCccccc-------cc-c------hh---------H---HHHHHHHH
Confidence 11 000 000 0000000 00 0 00 0 00012357
Q ss_pred HHhcChhHHHHHHHHHHhhhhhhhhhhcHHH-HHHHcCCCCcchhHHHHHHHH-hhhhhccccccchhhhhhhcCCCchH
Q 008597 341 QSVCTLNFWLLFVAMLCGMGSGLATVNNISQ-IGESLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLHRMGWERPS 418 (560)
Q Consensus 341 ~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~-i~~~lG~~~~~aa~lvSl~si-~n~~GRl~~G~lsD~~~~~~~~~R~~ 418 (560)
+.+|+|.+|.+....++............++ +.+++|+++++.+.+.+..++ +..+|.+++|++.||+++|+ .
T Consensus 204 ~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~-----~ 278 (402)
T PRK11902 204 DFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR-----S 278 (402)
T ss_pred HHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH-----H
Confidence 8999999998776655443322222222333 445689988888887766654 58899999999999996543 2
Q ss_pred HHHHHHHHHHHHHH---HHhh--cCcchHHHHH----HHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHh
Q 008597 419 FIAITLATMSVGHI---VVAS--GFPGNLYVGS----IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 489 (560)
Q Consensus 419 ~l~~~~~l~~~~~l---ll~~--~~~~~l~~~~----~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ 489 (560)
+.+...+..+..+ ++.. ++...+.+.. +..|+.++....+...++.+.++.++++. ......++..
T Consensus 279 -l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~ 353 (402)
T PRK11902 279 -LMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQYAL----LSALASVGRV 353 (402)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH----HHHHHHHHHH
Confidence 2222222222222 2222 2222233333 35667788888888889998888776654 3222344443
Q ss_pred hhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 490 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 490 ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
.. .++.|.++|+.| |+..|.+.+.++++++++.
T Consensus 354 ~~-~~~~G~l~~~~G------------~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 354 YV-GPTSGYLVEAYG------------WPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HH-HHHHHHHHHHhC------------hHHHHHHHHHHHHHHHHHH
Confidence 33 357999999987 9999999888887776543
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.61 E-value=2.8e-13 Score=144.46 Aligned_cols=153 Identities=10% Similarity=0.072 Sum_probs=105.7
Q ss_pred hhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 008597 364 ATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGN 441 (560)
Q Consensus 364 ~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~ 441 (560)
.+..+.+.+.+ .+|+++.+++.+.++..+...++++++|+++||+++|+ . +........+...... .+++..
T Consensus 234 ~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
T PRK15011 234 LYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRF-----L-MRVAAVAGVCFYAGMLMAHSPAI 307 (393)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----H-HHHHHHHHHHHHHHHHHHhhHHH
Confidence 34456777765 56888888888888888888999999999999997543 2 2222222222222222 233333
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHH
Q 008597 442 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 442 l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
+.+...+.++++|...+..+....|.+. ++.++..++......+|. .+++.+.|.++|..+ |+..|
T Consensus 308 ~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~lg~-~~g~~l~G~i~~~~g------------~~~~~ 373 (393)
T PRK15011 308 LLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRVGW-IIAGSLAGIVAEIWN------------YHAVF 373 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHHHH-HHHHHHHHHHHHHhh------------hHHHH
Confidence 4445555666777777777888889887 568999998866666777 478889999999865 89999
Q ss_pred HHHHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLVAF 536 (560)
Q Consensus 522 ~i~~~l~~la~vl~l 536 (560)
.+.+++++++.++.+
T Consensus 374 ~~~~~~~~~~~~~~~ 388 (393)
T PRK15011 374 WFALVMIIATLFCLL 388 (393)
T ss_pred HHHHHHHHHHHHHHH
Confidence 988877777665433
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.61 E-value=1.8e-13 Score=164.68 Aligned_cols=369 Identities=12% Similarity=0.082 Sum_probs=216.7
Q ss_pred ccccHHHHhhcCCChhh--hhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHH
Q 008597 33 GIYSSTLKSSQNYDQST--LDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMW 109 (560)
Q Consensus 33 s~ys~~l~~~~~~s~~~--~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~ 109 (560)
.+..+.+.+.++.++++ ...+..+..++..+ .+++|.+.||+| +|.+++++.++..++.++..
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~g--------------rk~~l~~~~~~~~~~~~~~~ 95 (1146)
T PRK08633 30 ILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFS--------------KNRVIRIVKLFEVGLTLLIV 95 (1146)
T ss_pred HHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhccccc--------------HHHHHHHHHHHHHHHHHHHH
Confidence 34455666677776554 34445555555544 778899999886 88888887766666555533
Q ss_pred HHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHH
Q 008597 110 ASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYL 188 (560)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fl 188 (560)
++.. .. +++.+++.-++.|.+.+....+......+++| ++||.+.|+...+..+|.++-..+...+..
T Consensus 96 ~~~~--~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~------- 164 (1146)
T PRK08633 96 LAYY--LG--WFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE------- 164 (1146)
T ss_pred HHHH--Hc--cHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 3221 11 25667777788899999999999999999997 579999999988888877665433332210
Q ss_pred HHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccc
Q 008597 189 LILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGI 268 (560)
Q Consensus 189 l~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~ 268 (560)
.+. +.. .++ .........+..+ ...++.++.. +
T Consensus 165 ---------------~~~---~~~--~~~-~~~~~~~~~~~~~-----------------------~~~~~~~~~~-~-- 197 (1146)
T PRK08633 165 ---------------SVN---GNT--PSE-ILGRIAPAGLVLL-----------------------AVAVLGLIFA-Y-- 197 (1146)
T ss_pred ---------------hhc---ccc--ccc-cccchHHHHHHHH-----------------------HHHHHHHHHH-h--
Confidence 000 000 000 0000000000000 0000000000 0
Q ss_pred ccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhH
Q 008597 269 AIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNF 348 (560)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~F 348 (560)
..+ + . ++..... + +... ... .......+++.++++.+
T Consensus 198 ~~~----~--~---------------~~~~~~~----~-~~~~----------------~~~-~~~~~~~~~~l~~~~~~ 234 (1146)
T PRK08633 198 RLP----K--V---------------PAAAPEV----F-DKKK----------------YLF-PKLLWRNLKLLRSDRVL 234 (1146)
T ss_pred cCc----C--C---------------CCCCccc----c-cccc----------------ccc-HHHHHHHHHHHhcCcHH
Confidence 000 0 0 0000000 0 0000 000 00001235678899999
Q ss_pred HHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCc-chhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 349 WLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTS-AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 349 wll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~-~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
|.+.+..++.......+...++.+.+ .+|.+.. ..+.+.++..++..+|.+++|+++||..+++ .+.+..++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~------~~~~~~~~ 308 (1146)
T PRK08633 235 WLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG------LVPLGALG 308 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc------chhHHHHH
Confidence 98877777666666666677777775 4688887 7888889999999999999999999975432 22333344
Q ss_pred HHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 427 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 427 ~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
++++.+++. ..+...+.+..+++|++.|.......+++.+.+..++.|..+|+.++...+|.. +++.+.+. .+..+-
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~-~~~~~~~~-l~~~~~ 386 (1146)
T PRK08633 309 LALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML-LFLALTTL-FSGLGL 386 (1146)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH-HHHHHHHH-HHHhcc
Confidence 444444333 233445666788899999998888889999999999999999998776666663 34433333 332220
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
-+...|.+.+.++++..+.
T Consensus 387 ----------~~~~~~~~~~~~~~~~~~~ 405 (1146)
T PRK08633 387 ----------SPAGLFYLIALVTLIGTLY 405 (1146)
T ss_pred ----------CHHHHHHHHHHHHHHHHHH
Confidence 1445666666555544433
No 77
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.56 E-value=1e-12 Score=139.63 Aligned_cols=178 Identities=15% Similarity=0.122 Sum_probs=125.5
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHH-hhhhhccccccchhhhhhhcCCCc
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si-~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
+.++.+|+|.+|.+....++...+........+++.+++|+++++.+.+.++.++ ...+|.++.|++.||+++|+
T Consensus 200 ~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~---- 275 (390)
T TIGR02718 200 SLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWR---- 275 (390)
T ss_pred HHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHH----
Confidence 3578999999998777666655544445556678888899999988888887764 67789999999999997543
Q ss_pred hHHHHHHHHHHHHHH-HHHh--h----cCcchHHHHHHHHHhhhhccccchhhHHHHhccC-CchhhhhhHHHhhhhhHH
Q 008597 417 PSFIAITLATMSVGH-IVVA--S----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~-lll~--~----~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~-k~~g~~yG~~~~a~~~g~ 488 (560)
. +.....+.++.. +... . ..+..++...++.+++.|..+....+...+..+. ++.++.+++.+....+|.
T Consensus 276 -~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~ 353 (390)
T TIGR02718 276 -T-FILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGE 353 (390)
T ss_pred -H-HHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHH
Confidence 2 222222221211 1111 1 1111223333455667788777777777788887 788999999988788888
Q ss_pred hhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 489 YVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 489 ~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
. +++.+.|.++|..| |+..|.+++++.+++.++
T Consensus 354 ~-~g~~~~G~l~~~~G------------~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 354 L-IASSIAGYLTDRFG------------YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred H-HHHHHHHHHHHHHc------------cHHHHHHHHHHHHHHHHH
Confidence 4 78899999999876 899999988877776543
No 78
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=2.5e-12 Score=134.74 Aligned_cols=367 Identities=15% Similarity=0.119 Sum_probs=239.7
Q ss_pred ccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHH
Q 008597 33 GIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWAS 111 (560)
Q Consensus 33 s~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~ 111 (560)
.+--|++|+.+++|+.|.+.+-++.-.|-.+ +++.|++.+|+| -|..+++|..++.+|-+++|-+
T Consensus 33 diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~g--------------yk~gi~lgL~l~avg~~lF~pA 98 (422)
T COG0738 33 DILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLG--------------YKAGIVLGLLLYAVGAALFWPA 98 (422)
T ss_pred hhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhh--------------hHHHHHHHHHHHHHHHHHHhhh
Confidence 4566999999999999999888888444333 789999999987 7889999999999999998755
Q ss_pred HhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHH
Q 008597 112 VVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLI 190 (560)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~ 190 (560)
-..+ .+-..+.-.++.|.|.+...|++-.-.....|. +.-.=..++.+++|||+.+...+-..+...+
T Consensus 99 a~~~----~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~------- 167 (422)
T COG0738 99 ASSK----SYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSG------- 167 (422)
T ss_pred hhhh----hHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh-------
Confidence 4432 244555556788999999999999999999976 3334468999999999999987766653211
Q ss_pred HHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccc
Q 008597 191 LALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAI 270 (560)
Q Consensus 191 la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~ 270 (560)
. . ...++++.+ ..+ .++.-....++..+... +++++.-.. ..
T Consensus 168 -------~----------~-~~~~~~~~~--~~~---------------~~~~~~v~~pYl~~~~~--lvll~v~~~-~~ 209 (422)
T COG0738 168 -------V----------A-LTMSAAQIL--AIK---------------GADASSVQFPYLILAGL--LVLLAVLIL-LS 209 (422)
T ss_pred -------h----------h-hccCHHHHH--HHH---------------HHHHHhhhhHHHHHHHH--HHHHHHHHH-hc
Confidence 0 0 000011100 000 00111122222222222 111111110 00
Q ss_pred ccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHH
Q 008597 271 KAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWL 350 (560)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwl 350 (560)
+.|+.+ +++ +++ . +.++.+..+++|+|.+|.
T Consensus 210 ----------------------k~p~~~----------~~~----~~~----------~---~~~~~~~~~l~~~~~~~~ 240 (422)
T COG0738 210 ----------------------KLPDLQ----------VAA----PSL----------G---ASGSAGLSSLFQNKHLRL 240 (422)
T ss_pred ----------------------cCCcCC----------ccc----ccc----------c---ccccchHHHHHhChHHHH
Confidence 001000 000 000 0 111236789999999999
Q ss_pred HHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHH
Q 008597 351 LFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSV 429 (560)
Q Consensus 351 l~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~ 429 (560)
-.+..|+-.|.-.++-++++.+.++ .|.++.+++..+|.+-.+-++||++.-++-.|+. +++.....++.-..+
T Consensus 241 gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~-----~~k~Laf~a~~~ill 315 (422)
T COG0738 241 GVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIK-----PEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHH
Confidence 9999999999999989999999988 7889999999999999999999977777666774 333332222121111
Q ss_pred HHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCC
Q 008597 430 GHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGN 509 (560)
Q Consensus 430 ~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~ 509 (560)
.......++ ..-..+..++|+..+..|+..-++..+..| +|-+..=+++.++..-|+ .-|++.|++-|+.|
T Consensus 316 ~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~maivGGA--iiP~l~G~i~d~~g----- 386 (422)
T COG0738 316 LLAVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMAIVGGA--IIPPLQGVIADMFG----- 386 (422)
T ss_pred HHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeheecch--HHHHHHHHHHHhhh-----
Confidence 111111233 223335688899999999999999999999 777777777766555555 34889999999887
Q ss_pred cccCccccHHHHHHHHHHHHHHH
Q 008597 510 SCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 510 ~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
-+..+.+.-.+|.+-+
T Consensus 387 -------~~~~~~~~pllc~lyV 402 (422)
T COG0738 387 -------IQLTFLIVPLLCYLYV 402 (422)
T ss_pred -------hHHHHHHHHHHHHHHH
Confidence 3455554555554433
No 79
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.54 E-value=6e-12 Score=133.33 Aligned_cols=357 Identities=15% Similarity=0.119 Sum_probs=240.6
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
+.-.=--|++.+.+|.|..+.-..-+...++..+ +++...+.||+. +|.+++....++.+|=.+.
T Consensus 30 fv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~--------------Rr~lLl~~l~lFi~~n~l~ 95 (394)
T COG2814 30 FVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLE--------------RRRLLLGLLALFIVSNLLS 95 (394)
T ss_pred HHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--------------hHHHHHHHHHHHHHHHHHH
Confidence 3334445999999999999888555555566655 778888888875 7778888888888888873
Q ss_pred HHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhH
Q 008597 109 WASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTY 187 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~f 187 (560)
+++ ++++.+++-=++.|...|.+...+...+++-=| +|||.|+|++.++.-++-.+=.++-..+
T Consensus 96 alA-------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i-------- 160 (394)
T COG2814 96 ALA-------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL-------- 160 (394)
T ss_pred HHh-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH--------
Confidence 222 457777777788888888888888888888775 6899999999888777655543222211
Q ss_pred HHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 188 LLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 188 ll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
.+..|...++..+..+.++.++..-..
T Consensus 161 -----------------------------------------------------g~~~GWR~~F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 161 -----------------------------------------------------GQLFGWRATFLAIAVLALLALLLLWKL 187 (394)
T ss_pred -----------------------------------------------------HHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 133444444433333222222221111
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
+| | ++ .+ + . +..+-.+..+.+|+|.
T Consensus 188 lP-~------------------------~~-~~--------~-------------------~--~~~~~~~~~~~l~~p~ 212 (394)
T COG2814 188 LP-P------------------------SE-IS--------G-------------------S--LPGPLRTLLRLLRRPG 212 (394)
T ss_pred CC-C------------------------cc-CC--------C-------------------C--CCcchhHHHHHhcCch
Confidence 10 0 00 00 0 0 0000123488999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
-|......++..+..++....+.|+.++. |++.+..+...-+++++..+|-++.|.++|| + +|+.. .....+
T Consensus 213 v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~-----~~~~l-~~~~~l 285 (394)
T COG2814 213 VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-G-----PRRAL-IAALLL 285 (394)
T ss_pred HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-c-----chhHH-HHHHHH
Confidence 99999999999999999999999999876 8898889999999999999999999999999 4 33333 334445
Q ss_pred HHHHHHHHh-h-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 427 MSVGHIVVA-S-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 427 ~~~~~lll~-~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+++.++.+. . +++.......++.|+..+........-.++ ..+++....-++...+..+|- -+|..+.|.++|+.|
T Consensus 286 ~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgi-a~GA~lGG~v~~~~g 363 (394)
T COG2814 286 LALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGI-ALGAALGGLVLDALG 363 (394)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhc
Confidence 555554433 2 333334444555677777666666666666 555777666666544444444 245557899999976
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 544 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~ 544 (560)
|....++.+.+.+++.++.++...++||
T Consensus 364 ------------~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 364 ------------YAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999998877666554443
No 80
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.54 E-value=1.6e-12 Score=139.07 Aligned_cols=373 Identities=13% Similarity=0.019 Sum_probs=211.2
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcH
Q 008597 13 WIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPW 91 (560)
Q Consensus 13 w~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~ 91 (560)
+..+..+.++.......+.+. .+++.++++.++.++..+..+..++..+ .++.|.+.||+| +|
T Consensus 5 f~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~g--------------rr 68 (393)
T PRK11195 5 FYAIMAAQFFSALADNALLFA--AIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFP--------------KG 68 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccC--------------Cc
Confidence 334555555554433334333 3456778888888888777777777765 789999999987 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHH
Q 008597 92 VVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGA 170 (560)
Q Consensus 92 ~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~ 170 (560)
.+++++.+...++..+.... .+ . ...-++.|.+.+..+.+......+++| ++|+.+.|+......++..
T Consensus 69 ~vl~~~~~~~~~~~~~~~~~-----~~--~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~ 138 (393)
T PRK11195 69 RVMFIANGIKLLGCLLMLFG-----IH--P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAIL 138 (393)
T ss_pred hhhHHHHHHHHHHHHHHHHH-----HH--H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 89999998888877654222 11 1 222356789999999999999999998 5799999998766655554
Q ss_pred HHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhH
Q 008597 171 ALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWA 250 (560)
Q Consensus 171 i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 250 (560)
+-..+...+.+ ... .. ...+....++
T Consensus 139 ~Gp~lgG~l~~----------------------~~~---------------~~-~~~i~~~~~~---------------- 164 (393)
T PRK11195 139 LGTVLGGALAD----------------------PHA---------------EA-ALAVCALIYL---------------- 164 (393)
T ss_pred HHHHHHHHHHH----------------------HHH---------------HH-HHHHHHHHHH----------------
Confidence 44322211100 000 00 0000000000
Q ss_pred HHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccccc
Q 008597 251 RIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKK 330 (560)
Q Consensus 251 ~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (560)
+..+.. . ..| +. +++.+ ..+. +. . ... +
T Consensus 165 --------~~~~~~-~--~l~----~~-----------------~~~~~-------~~~~-------~~-~--~~~--~- 192 (393)
T PRK11195 165 --------LAALFN-L--FIP----RL-----------------GARRP-------GQSW-------NP-I--ALL--R- 192 (393)
T ss_pred --------HHHHHH-h--cCC----CC-----------------ccccc-------ccCC-------CH-H--HHH--H-
Confidence 000000 0 010 00 00000 0000 00 0 000 0
Q ss_pred ccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhh
Q 008597 331 LKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 409 (560)
Q Consensus 331 ~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~ 409 (560)
+. ....++.+|++.++...+..++..+.........+.+.+ .+|.++.+.+.+.+..++...+|.+..|.+.||..
T Consensus 193 --~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~ 269 (393)
T PRK11195 193 --DF-FHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLET 269 (393)
T ss_pred --HH-HHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 00 012356788888876655444433333333344455555 46888888888889999999999888888877653
Q ss_pred hhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCc--hhhhhhHHHhhhhh
Q 008597 410 HRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH--MGTIFNTIAIASPV 486 (560)
Q Consensus 410 ~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~--~g~~yG~~~~a~~~ 486 (560)
+ |+.. ...+ +.++..+.+. .+++....+..++.|++.|.......+.+.+. .+++ .|...++.++...+
T Consensus 270 ~-----~~~~-~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~-~~~~~~~g~~~a~~~~~~~~ 341 (393)
T PRK11195 270 V-----LRVL-PAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHR-GHVLVGAGHSIAVQNFNENL 341 (393)
T ss_pred c-----cchH-HHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhh-CcccccchhHHHHHhHHHHH
Confidence 2 2222 2222 2233322222 22333344566688898888777677777665 5554 48888888887777
Q ss_pred HHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008597 487 GSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 544 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~ 544 (560)
+.. ++..+++.+ |..| -+..+++.+...++++.++ +++|.++
T Consensus 342 ~~~-~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~--~~~~~~~ 383 (393)
T PRK11195 342 AML-LMLGLYSLL-VKLG------------VPVVAVIVGFGLLVALAMA--LLWRWHR 383 (393)
T ss_pred HHH-HHHHHHHHH-HHcC------------CCHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 764 566666644 6655 5666777665555555443 3444444
No 81
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.53 E-value=2.5e-12 Score=133.03 Aligned_cols=344 Identities=14% Similarity=0.098 Sum_probs=227.1
Q ss_pred ccccccHHHHhhcCCChhhhhHHHHHHhhhh-hhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHH
Q 008597 31 TFGIYSSTLKSSQNYDQSTLDTVSVFKDIGA-NVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMW 109 (560)
Q Consensus 31 ~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~-~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~ 109 (560)
+-+---+++++.+|.|-++...+++.=.+.. .+++++..+..|+| ++..+..+.++..+|-.+
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g--------------~er~l~~~Llli~~G~~i-- 93 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFG--------------EERSLFLALLLIAAGILI-- 93 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh--------------hHHHHHHHHHHHHHHHHH--
Confidence 3444457788899999988887775544443 35777888877776 899999999999999887
Q ss_pred HHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHHHHHHHHHhcCC--CchhH
Q 008597 110 ASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIWKG--RPSTY 187 (560)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~--~~~~f 187 (560)
.... +.+.+..=..++|.|.+..|.=-=.-.-++||+|-|..+|+-....+++++.-+.+..-+-+. .-..=
T Consensus 94 ---R~~~---~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~a 167 (395)
T COG2807 94 ---RSLG---GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGA 167 (395)
T ss_pred ---Hhcc---cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHH
Confidence 3332 233444445777777776665444555679999999999999999999888876443322100 01111
Q ss_pred HHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccc
Q 008597 188 LLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLG 267 (560)
Q Consensus 188 ll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~ 267 (560)
+.+.|+.+. +.++.=.|
T Consensus 168 L~~WAl~al-------------------------------------------------------------lAl~~WlP-- 184 (395)
T COG2807 168 LGFWALLAL-------------------------------------------------------------LALLIWLP-- 184 (395)
T ss_pred HHHHHHHHH-------------------------------------------------------------HHHHHHhh--
Confidence 111111110 00111111
Q ss_pred cccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh
Q 008597 268 IAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN 347 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~ 347 (560)
+. .+. . .++ . + ....+-...+|||.
T Consensus 185 ----q~----~r~------------~-~~~--------------------~----------~----~~~~~~~~vw~~~~ 209 (395)
T COG2807 185 ----QA----LRE------------Q-AAS--------------------I----------A----TKLVSVRKVWRSPL 209 (395)
T ss_pred ----hc----ccc------------c-ccc--------------------c----------c----cccccccccccCch
Confidence 00 000 0 000 0 0 00011244779999
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
-|.+-+.+-+.++.-..++.++|+|..+.|+++++++.++|+..+.....-+...++.+|.. ++++.......++
T Consensus 210 aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~-----n~r~~~~~~~~~~ 284 (395)
T COG2807 210 AWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSK-----NQRPLVVLALLLM 284 (395)
T ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhc-----ccchHHHHHHHHH
Confidence 99999988888888889999999999999999999999999999999999999999999853 3334444444555
Q ss_pred HHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH--HhhhhhHHhhhhhhhhhhhcccccC
Q 008597 428 SVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI--AIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 428 ~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~--~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
.++.+-+........++.+++.|++.|+.|++.-.++.+..-..+.+..-.-+ ..++.+.+ ++|.+.|+++|.+|+
T Consensus 285 l~G~~G~~~~P~~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa--~GP~l~G~lhDa~gs 362 (395)
T COG2807 285 LVGLVGLLLAPGQLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAA--FGPWLFGFLHDATGS 362 (395)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHh--hhhhhHhHHHHhcCC
Confidence 45543221111123344479999999999999999888877655554443333 34555555 678999999999985
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
|+.++...+...++..
T Consensus 363 -----------w~~~~~~l~~~~i~m~ 378 (395)
T COG2807 363 -----------WSAPLVLLALATLLML 378 (395)
T ss_pred -----------hHHHHHHHHHHHHHHH
Confidence 8888887776554444
No 82
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.53 E-value=2.1e-12 Score=138.97 Aligned_cols=115 Identities=18% Similarity=0.121 Sum_probs=86.0
Q ss_pred HHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Q 008597 37 STLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGL 115 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~ 115 (560)
+++.++++.++++.+.......++..+ .++.|.+.||+| +|+++++|.+...++..+.. .
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~G--------------rr~~l~~~~~~~~~~~~~~~-----~ 100 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIG--------------RRPVLITGALIFTLACAATL-----F 100 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcC--------------chHHHHHHHHHHHHHHHHHH-----H
Confidence 467889999999998555555566654 778999999986 88899999888888877632 2
Q ss_pred CCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHH
Q 008597 116 IHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAAL 172 (560)
Q Consensus 116 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~ 172 (560)
.+ +++.+...-++.|.+.++...........+||+ +|+.+.|+.....+++..+-
T Consensus 101 a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (413)
T PRK15403 101 TT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIG 156 (413)
T ss_pred cC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 355666677888888876666666666778986 57888888888877776654
No 83
>PRK09848 glucuronide transporter; Provisional
Probab=99.49 E-value=4.4e-12 Score=137.63 Aligned_cols=159 Identities=11% Similarity=0.013 Sum_probs=101.7
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCch
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~ 417 (560)
.++.+||+.|+.+.+..++............+.+.++ +|.++...........+...++.+++++++||+++|
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~------ 294 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK------ 294 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------
Confidence 5779999999998877776654444433344444454 465443333223333556777888999999998643
Q ss_pred HHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhc-------cCCchhhhhhHHHhhhhhH
Q 008597 418 SFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-------GVGHMGTIFNTIAIASPVG 487 (560)
Q Consensus 418 ~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~F-------G~k~~g~~yG~~~~a~~~g 487 (560)
..+.+...+.+++.+++.. .+...+++..++.|++.|..++...++.+|.- |.++.|..+|+.++..-+|
T Consensus 295 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg 374 (448)
T PRK09848 295 NTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCG 374 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHH
Confidence 2334444555555544332 12233455567788999888888888877765 5566799999987777777
Q ss_pred Hhhhhhhhhhhhccccc
Q 008597 488 SYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 488 ~~ll~~~l~G~iyD~~g 504 (560)
.- +++.+.|.+.|..|
T Consensus 375 ~a-ig~~i~g~~l~~~G 390 (448)
T PRK09848 375 QA-IGGSIPAFILGLSG 390 (448)
T ss_pred HH-HHHHHHHHHHHHcC
Confidence 73 66667777766544
No 84
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.47 E-value=4.8e-11 Score=129.93 Aligned_cols=400 Identities=14% Similarity=0.115 Sum_probs=243.7
Q ss_pred cHHHHhhcC--CChhhhh----HHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 36 SSTLKSSQN--YDQSTLD----TVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 36 s~~l~~~~~--~s~~~~~----~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
.+.+.+++| .+.++++ .+..+..+|+.+ .+.+|++.|++| +|..+++..++..++-.++
T Consensus 42 n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~G--------------RK~~l~~~~~l~~~~~~~~ 107 (485)
T KOG0569|consen 42 NETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFG--------------RKNALLLSNLLAVLAALLM 107 (485)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--------------chHHHHHHHHHHHHHHHHH
Confidence 355667788 4444454 333455566666 456888888876 8888999888888888776
Q ss_pred HHHHhccCCCCcHHHHHHHH-HHhhcccchhhhhhHHHHhhhccCC-CcceeeehhhhhhhhHHHHHHHH-HHhc-CCCc
Q 008597 109 WASVVGLIHSPPVPLMCLFM-FLAAHSQTFFNTGNVVTGVMNFGDY-GGTIVGIMKGFLGLGGAALIQAY-DTIW-KGRP 184 (560)
Q Consensus 109 ~l~~~~~~~~~~~~~~~~~~-~l~g~g~~~~~~~~~~t~~~~Fp~~-RG~a~Gi~~~~~GLsa~i~s~i~-~~~f-~~~~ 184 (560)
..+..- + ++ -+..++ ++.|..++........-...-=|++ ||.+.-+..-++.+|-.+-.++. ..++ ++|.
T Consensus 108 ~~s~~~--~--~~-e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~ 182 (485)
T KOG0569|consen 108 GLSKSA--P--SF-EMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDL 182 (485)
T ss_pred HHHHHh--h--hH-HHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcc
Confidence 444332 2 23 344455 8889999888888888888888874 99888777777777777765554 4455 3356
Q ss_pred hhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhc
Q 008597 185 STYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSS 264 (560)
Q Consensus 185 ~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 264 (560)
..+++.....|..+.++..+++-.-| | ||++. .-+...+.+-+
T Consensus 183 W~~l~~~~~i~~~~~l~~l~~~PESP-------k--------------~Ll~~-----k~~~~~A~~sl----------- 225 (485)
T KOG0569|consen 183 WPYLLAFPLIPALLQLALLPFLPESP-------K--------------YLLIK-----KGDEEEARKAL----------- 225 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCc-------c--------------hHHHH-----cCCHHHHHHHH-----------
Confidence 78999999999998888777652211 1 22210 00000000000
Q ss_pred ccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhc
Q 008597 265 PLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVC 344 (560)
Q Consensus 265 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lk 344 (560)
+. ++..+ + .+. . .+++ .++.++++..+.++.+++|+++
T Consensus 226 ------~~-y~G~~--------------~-~~~-~----------~e~~---------~~e~~~~~~~~~~~~sl~~~~~ 263 (485)
T KOG0569|consen 226 ------KF-YRGKE--------------D-VEA-E----------IEEM---------LREIEEEELEKKKQISLRQLLK 263 (485)
T ss_pred ------HH-HhCCC--------------c-chh-H----------HHHH---------HHHHHHhccccccCCcHHHHhc
Confidence 00 00000 0 000 0 0000 0000000011224578899988
Q ss_pred Chh----HHHHHHHHHHhhhhhhhhhhc-HHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 345 TLN----FWLLFVAMLCGMGSGLATVNN-ISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 345 t~~----Fwll~~~~~~~~g~gl~~i~~-~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
++. .++.....++-.++|...++. .-.|.++.|++..++...-...++.|.+..+++.++-||.+ |+..
T Consensus 264 ~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~g------RRpL 337 (485)
T KOG0569|consen 264 NPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLG------RRPL 337 (485)
T ss_pred CcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CcHH
Confidence 853 445555556666677766644 45677888999888888888999999999999999999985 4555
Q ss_pred HHHHHHHHHHHHHHHh-----hc-C-cch---HHHHHHHHHhhhhccc-cchhhHHHHhccCCchhhhhhHHHhhhhhHH
Q 008597 420 IAITLATMSVGHIVVA-----SG-F-PGN---LYVGSIIVGVCYGCQW-SLMPTITYEIFGVGHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 420 l~~~~~l~~~~~lll~-----~~-~-~~~---l~~~~~l~G~~~G~~~-~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~ 488 (560)
+.....++.+..+++. .. . ++. ...+.++..+.|+... ++..-+++|+|..++++++..+.....++..
T Consensus 338 ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~ 417 (485)
T KOG0569|consen 338 LLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSN 417 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHH
Confidence 6566665555544322 11 1 111 2334455555555543 3445678999999999999999988888888
Q ss_pred hhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHh
Q 008597 489 YVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRR 553 (560)
Q Consensus 489 ~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~~ 553 (560)
++.+ ..+=.+++.-|. ..|++..+.|++..+......-.||.+.-.++.|.
T Consensus 418 fiv~-~~fp~l~~~~g~-------------~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~ 468 (485)
T KOG0569|consen 418 FIVG-FAFPPLQNVIGP-------------YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEE 468 (485)
T ss_pred HHHH-HHHHHHHHHhcc-------------hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHH
Confidence 7544 334455555542 45666666676666555555555675554444333
No 85
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.4e-11 Score=135.09 Aligned_cols=263 Identities=16% Similarity=0.092 Sum_probs=166.2
Q ss_pred HHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 008597 39 LKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIH 117 (560)
Q Consensus 39 l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~ 117 (560)
+++..+....|++.+.++..++-.+ .+++|++.||+++ .|.....+.+-...+++.. ...
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l-------------s~~l~~~~~~w~~~~~~~~------~~~ 132 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL-------------SKGLSVSGILWGLFGFLTA------AVH 132 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh-------------HHHHHHHHHHHHHHHHHHH------HHh
Confidence 6788889999999888888888776 6899999999851 1222222222222222221 122
Q ss_pred CCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhH
Q 008597 118 SPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPT 196 (560)
Q Consensus 118 ~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~ 196 (560)
+++.++..=++.|.-++....+.+....+||. ++||+..|+.-+..++|+.+-+.++..+++-|..
T Consensus 133 --s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~----------- 199 (495)
T KOG2533|consen 133 --SFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGS----------- 199 (495)
T ss_pred --hhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCC-----------
Confidence 35677777788889999999999999999996 5899999999999999999998888776520000
Q ss_pred HHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhccccccccccccc
Q 008597 197 FASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQRED 276 (560)
Q Consensus 197 ~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~ 276 (560)
....+.++.+-+-+.+.++.-+..++..|... .+
T Consensus 200 --------------------------------------------~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P--~~ 233 (495)
T KOG2533|consen 200 --------------------------------------------GGLAGWRWLFIIEGVITLVLGIVVFFFLPDNP--SK 233 (495)
T ss_pred --------------------------------------------CCcCCceeehhHHHHHHHHHHheEEEEecCCh--hh
Confidence 01112222222222222222222222211100 00
Q ss_pred ccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHH
Q 008597 277 TTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAML 356 (560)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~ 356 (560)
...+++. |+.- . ++..+..+.++ . ++ +.+-..++|++|+|..|.+.+..+
T Consensus 234 ------------~~fl~~~-----ek~~--~-~~~~~~~~~~~-----~--~~---~~~~~~~~~a~~dp~vw~~~l~~~ 283 (495)
T KOG2533|consen 234 ------------AWFLTDE-----EKEL--V-VERLRESPSGG-----I--EN---KFKWKGFKEALKDPGVWPFSLCYF 283 (495)
T ss_pred ------------ccccchH-----HHHH--H-HHHHHhccCCC-----c--cc---ccCHHHHHHHHhchhHHHHHHHHH
Confidence 0000000 0000 0 00000000000 0 00 012256789999999999999999
Q ss_pred HhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhh
Q 008597 357 CGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVL 409 (560)
Q Consensus 357 ~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~ 409 (560)
|.-..-....++++.+.++ .|++..++..+-..+.+.+.+|-++.|++|||+.
T Consensus 284 ~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~ 337 (495)
T KOG2533|consen 284 FLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLK 337 (495)
T ss_pred HHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHh
Confidence 9988877788899999888 5688888888888999999999999999999963
No 86
>PRK09669 putative symporter YagG; Provisional
Probab=99.43 E-value=2.2e-11 Score=132.15 Aligned_cols=159 Identities=11% Similarity=0.109 Sum_probs=101.6
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcc-hhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSA-INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~-aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
.+++.+||+.||.+....++... +....+....+.........+ ...+.....+...++.+++++++||+++|+
T Consensus 221 ~~~~~~~n~~~~~l~~~~~~~~~-~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~---- 295 (444)
T PRK09669 221 DLKLLLGNSQWRIMFIFNVVLLT-AVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVR---- 295 (444)
T ss_pred HHHHHhCCchHHHHHHHHHHHHH-HHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH----
Confidence 45788999999998776655432 223333344443322222222 233445566788899999999999997543
Q ss_pred hHHHHHHHHHHHH-HHHH--HhhcCcchHHHHHHHHHhhhhccccchhhHHHHhc-------cCCchhhhhhHHHhhhhh
Q 008597 417 PSFIAITLATMSV-GHIV--VASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-------GVGHMGTIFNTIAIASPV 486 (560)
Q Consensus 417 ~~~l~~~~~l~~~-~~ll--l~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~F-------G~k~~g~~yG~~~~a~~~ 486 (560)
.. .....+.++ +..+ +..++...+++..++.|++.|....+..++++|.. |.+.-|..++...+..-+
T Consensus 296 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl 373 (444)
T PRK09669 296 -AF-KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL 373 (444)
T ss_pred -HH-HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH
Confidence 22 222222222 2212 21233345666778899999999999999999987 777788888888666666
Q ss_pred HHhhhhhhhhhhhccccc
Q 008597 487 GSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~g 504 (560)
|. .+++.+.|.++|..|
T Consensus 374 g~-alg~~i~g~ll~~~G 390 (444)
T PRK09669 374 GL-AIGGAVVGWILAWVD 390 (444)
T ss_pred HH-HHHHHHHHHHHHHcC
Confidence 65 366667788877665
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.42 E-value=7e-10 Score=121.93 Aligned_cols=127 Identities=9% Similarity=-0.065 Sum_probs=95.8
Q ss_pred cccHHHHhh--cCCChhhhhHHHHHHhhhhhh-hhhHHHHHhh-ccccccccccccccCCcHHHHHHHHHHHHHHHHHHH
Q 008597 34 IYSSTLKSS--QNYDQSTLDTVSVFKDIGANV-GVLSGLLYSF-ATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMW 109 (560)
Q Consensus 34 ~ys~~l~~~--~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~-~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~ 109 (560)
.....+.++ +|+++.|...+.....++..+ .+++|.+.|| +| +|.++++|.++..+|+.++.
T Consensus 32 ~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G--------------~~~~l~~~~~~~~~g~~~~~ 97 (475)
T TIGR00924 32 ILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWG--------------TKKTMVLGGIVLMLGHFMLA 97 (475)
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcc--------------hHHHHHHHHHHHHHHHHHHH
Confidence 344556666 999999999776666666665 6789999999 66 89999999999999998853
Q ss_pred HHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC----CCcceeeehhhhhhhhHHHHHHHHHHhcC
Q 008597 110 ASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD----YGGTIVGIMKGFLGLGGAALIQAYDTIWK 181 (560)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~----~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~ 181 (560)
+ .. +++.+.+..++.|.|.+....+......++||+ +|+.+.++.-....+|+++-..+...+.+
T Consensus 98 ~-----~~--~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~ 166 (475)
T TIGR00924 98 M-----SI--YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE 166 (475)
T ss_pred h-----cc--cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH
Confidence 2 12 233444444567888888888888888899975 38999999888888888877766665544
No 88
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.38 E-value=4.1e-11 Score=127.05 Aligned_cols=412 Identities=16% Similarity=0.106 Sum_probs=219.2
Q ss_pred hhhchhHHHHHHHHHHHHhcCccc-ccccccHHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhcccccccccccc
Q 008597 7 LNLKSKWIATVASIWIQCCSGATY-TFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFS 85 (560)
Q Consensus 7 ~~~~~rw~~l~~~~~i~~~~G~~Y-~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~ 85 (560)
+..++||++|++..+.+.+.|... .|+.-++...+-|+ |.+..+..+ .+.+.+.++.|+..-+ +.
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wls---mIym~v~vp~gf~~mw----------~l 103 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLS---MIYMVVSVPFGFAAMW----------IL 103 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHH---HHHHHHHHHHhhHHHH----------hh
Confidence 467899999999999998876642 45555567778888 444444444 3444444555554333 33
Q ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHH--HHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehh
Q 008597 86 FLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVP--LMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMK 162 (560)
Q Consensus 86 ~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~--~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~ 162 (560)
||+|-|..+++|+++.++|-..--.+..-.+++ ..| +...=..+.+..+-+...-+-.-..-||| |+|..|..+-.
T Consensus 104 dk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~-~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v 182 (480)
T KOG2563|consen 104 DKFGLRTALLLGTVLNGIGAWIRLISSLPFVPP-LFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGV 182 (480)
T ss_pred cccchHHHHHHHHHHHHHHHHHhhhccCccccc-cchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHH
Confidence 556799999999999999988743333333332 244 33334477778888888888888899995 67977766644
Q ss_pred hhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhc
Q 008597 163 GFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILEN 242 (560)
Q Consensus 163 ~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 242 (560)
-+.=||.++-..+-..+ + |... +++.+...++. +++.
T Consensus 183 ~~n~LGvavg~llppil--------------------------V---~~~~-~~~~~~~~~~~------~f~~------- 219 (480)
T KOG2563|consen 183 MGNPLGVAVGFLLPPIL--------------------------V---PSSK-DSEDNSWLFFT------LFLG------- 219 (480)
T ss_pred hcchHHHHHHhhcccee--------------------------c---CCCC-CcchhHHHHHH------HHHH-------
Confidence 44447776653221111 1 1110 11111111110 0000
Q ss_pred ccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccc
Q 008597 243 IFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQV 322 (560)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (560)
..++..++. ++.... +. ++|+.. |... ++
T Consensus 220 ------------~~~l~~l~l-~l~~~~----~~----------------~~P~tP----------ps~s-----~~--- 248 (480)
T KOG2563|consen 220 ------------VECLAALLL-ALVLFV----FT----------------KKPPTP----------PSAS-----QA--- 248 (480)
T ss_pred ------------HHHHHHHHH-HHHHHh----cC----------------CCCCCC----------Cchh-----Hh---
Confidence 000011111 111111 00 001110 0000 00
Q ss_pred ccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccc
Q 008597 323 KAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGG 402 (560)
Q Consensus 323 ~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G 402 (560)
.+++ ... -.+.++++||.+|-++.+.+.++.|.-....+.+-+...-.|++...++..-.+.-+..++|-+++|
T Consensus 249 ----~~~~-~~f-~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~g 322 (480)
T KOG2563|consen 249 ----ALQD-ASF-PKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALASG 322 (480)
T ss_pred ----hhhc-CcH-HHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHHHHHHHHHHHHH
Confidence 0000 011 1467899999999999988888776544444444444445578877777777888899999999999
Q ss_pred cchhhhhhhcCCCchHHHHHHHHHHHHH-HHHHhh----cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhh
Q 008597 403 YVSDIVLHRMGWERPSFIAITLATMSVG-HIVVAS----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIF 477 (560)
Q Consensus 403 ~lsD~~~~~~~~~R~~~l~~~~~l~~~~-~lll~~----~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~y 477 (560)
.+.||..+=+ ..++ +.+....++ +.+... .....++..+.+.|++--+..++.--+-.|.-.+..=++--
T Consensus 323 ii~Dktk~fk----~~~~-v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSs 397 (480)
T KOG2563|consen 323 IIADKTKKFK----LTTL-VLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSS 397 (480)
T ss_pred hhhhhhhhHH----HHHH-HHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccc
Confidence 9999985321 1222 222222233 222211 12245666777778866555555444444544555556666
Q ss_pred hHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 008597 478 NTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYK 547 (560)
Q Consensus 478 G~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~ 547 (560)
|++.+...+-+.++ ..+.+...+..+. .+.+...-+.+...+++++++....+-++||.+.
T Consensus 398 Gll~~~gq~f~~~~-~~~~~~~~~~~~~--------~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~ 458 (480)
T KOG2563|consen 398 GLLNLSGQIFGVIL-VFIMGILAEDLGP--------PGNTFPANIFLTVSALLGAILVAFFRPDYRRLRA 458 (480)
T ss_pred eeEEeehhHHHHHH-HHHHHHHhhccCC--------CCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhh
Confidence 77654333222222 2334544444431 1123333333344444555444444444444444
No 89
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.37 E-value=5.1e-10 Score=123.80 Aligned_cols=412 Identities=12% Similarity=0.002 Sum_probs=211.7
Q ss_pred ccccccc-cHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhh-ccccccccccccccCCcHHHHHHHHHHHHHHH
Q 008597 29 TYTFGIY-SSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSF-ATLNHHHRTRFSFLRGPWVVHLTGAILCFAGY 105 (560)
Q Consensus 29 ~Y~fs~y-s~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~-~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~ 105 (560)
.|.+..+ ...+++++|+++++...+........+. .+++|++.|| +| +|.++++|.+...+|+
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G--------------~r~~~~~g~~~~~ig~ 102 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLG--------------TKRVIMLGAIVLAIGY 102 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--------------hHHHHHHHHHHHHHHH
Confidence 3444443 4566789999998877554444433333 5678999999 46 8999999999999998
Q ss_pred HHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC---CcceeeehhhhhhhhHHHHHHHHHHhcCC
Q 008597 106 FLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY---GGTIVGIMKGFLGLGGAALIQAYDTIWKG 182 (560)
Q Consensus 106 ~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~---RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~ 182 (560)
.++... .+ ..+.+.+...+.|.|.+...........++||++ |+.+.++.-.+..+|+++-..+...+.+.
T Consensus 103 ~l~~~~-----~~-~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~ 176 (500)
T PRK09584 103 ALVAWS-----GH-DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK 176 (500)
T ss_pred HHHHHh-----cc-cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 875432 11 1233334445667888887777777789999854 34577777778888887666665555433
Q ss_pred CchhHHHHHHHHhHHHHHhhheeeee-cCCCC-Cccccchhhhh----HHHHHHHHHHHHHHHHhcccccchhHHHHHHH
Q 008597 183 RPSTYLLILALLPTFASLLFMSLVRI-HGTNS-ADDKKHLNAFS----AVALTIAAYLMIIIILENIFTFPLWARIITFL 256 (560)
Q Consensus 183 ~~~~fll~la~~~~~v~~~~~~~ir~-~~~~~-~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
......+.+......++++...+.+. ++.+. +.++++.+... ..++....+.... ...+. ...+....+
T Consensus 177 ~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~ 251 (500)
T PRK09584 177 YGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATW-LLHNQ----EIARMALGV 251 (500)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHH-HHhcc----hHHHHHHHH
Confidence 23344444444444444444333332 22211 11111122111 1111112221110 01110 111110000
Q ss_pred HHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCcccccccccccccccccc
Q 008597 257 FLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEED 336 (560)
Q Consensus 257 ~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (560)
.-+..+.. .. .+ ..+. + +
T Consensus 252 ---~~~~~~~~-~~----~~-----------------~~~~-------------------------------~---~--- 269 (500)
T PRK09584 252 ---VALGIVVI-FG----KE-----------------AFAM-------------------------------K---G--- 269 (500)
T ss_pred ---HHHHHHHH-HH----HH-----------------Hhhc-------------------------------C---H---
Confidence 00000000 00 00 0000 0 0
Q ss_pred CcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc--C-CC------CcchhHHHHHHHHhhhhhccccccchhh
Q 008597 337 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL--G-YP------TSAINSLVSLWSIWNFLGRFGGGYVSDI 407 (560)
Q Consensus 337 ~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l--G-~~------~~~aa~lvSl~si~n~~GRl~~G~lsD~ 407 (560)
.-|.+. +.....+ +....-.++..+++...... + .+ ....+++.++.+++..+.-.+.+++-+|
T Consensus 270 -----~~~~~~-~~~~~~~-~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~ 342 (500)
T PRK09584 270 -----AARRKM-IVAFILM-LEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNK 342 (500)
T ss_pred -----HHHHHH-HHHHHHH-HHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 001111 1111111 11111112233443332211 0 11 1223455566665555555555555566
Q ss_pred hhhhcCCCchHHHHHHHHHHHHHHHHHhhc-C---------cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhh
Q 008597 408 VLHRMGWERPSFIAITLATMSVGHIVVASG-F---------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIF 477 (560)
Q Consensus 408 ~~~~~~~~R~~~l~~~~~l~~~~~lll~~~-~---------~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~y 477 (560)
..+|. +.+.-+.+.+.+++++++++... . ...+.+..++.|++.+...+....++.+.-..+..|...
T Consensus 343 l~~r~--~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~ 420 (500)
T PRK09584 343 MGDRL--PMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIM 420 (500)
T ss_pred hCcCC--CcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHH
Confidence 65553 33445566677778877654321 1 224666789999999999999999999999999999999
Q ss_pred hHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccC-ccccHHHHHHHHHHHHHHHHHHHHHHh
Q 008597 478 NTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG-THCFMLSFLIMASVAFVGCLVAFLLFI 540 (560)
Q Consensus 478 G~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G-~~cy~~~f~i~~~l~~la~vl~l~l~~ 540 (560)
|+..++..+|++ ++..+.+......... .... .+-|...|...++++++..++.+++..
T Consensus 421 g~~~l~~a~g~~-~~g~~~~~~~~~~~~~---~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~ 480 (500)
T PRK09584 421 GSWFLTTAGAAL-IAGYVANLMAVPDNVT---DPLMSLEVYGRVFLQIGIATAVIAVLMLLTAP 480 (500)
T ss_pred HHHHHHHHHHHH-HHHHHHHHhccccccc---cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888886 3333333322111000 0000 112888898888877655544444333
No 90
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.32 E-value=3.9e-09 Score=116.50 Aligned_cols=124 Identities=12% Similarity=0.021 Sum_probs=90.3
Q ss_pred cccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhh-ccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHH
Q 008597 34 IYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSF-ATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWAS 111 (560)
Q Consensus 34 ~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~-~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~ 111 (560)
.....+++.+|+++++...+........+. .+++|++.|| +| +|+++++|.+++.+|+.+..+.
T Consensus 36 ~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G--------------~r~~~~~g~~~~~~g~~~~~~~ 101 (489)
T PRK10207 36 ILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLG--------------TKRTIVLGAIVLAIGYFMTGMS 101 (489)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccc--------------hHHHHHHHHHHHHHHHHHHHHh
Confidence 444667888999999988666555544444 6789999998 76 9999999999999999886433
Q ss_pred HhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC---CcceeeehhhhhhhhHHHHHHHHH
Q 008597 112 VVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY---GGTIVGIMKGFLGLGGAALIQAYD 177 (560)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~---RG~a~Gi~~~~~GLsa~i~s~i~~ 177 (560)
.+.+ .++...-++.|.|.+...........+.||++ |+.+.++.-.+..+|+++-..+..
T Consensus 102 -----~~~~-~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g 164 (489)
T PRK10207 102 -----LLKP-DLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAP 164 (489)
T ss_pred -----ccch-hHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHH
Confidence 1111 22333456678999988888888889999753 477788888888888776544433
No 91
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.31 E-value=2.9e-10 Score=124.61 Aligned_cols=158 Identities=10% Similarity=-0.000 Sum_probs=100.9
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHH-HHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCch
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQI-GESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~ 417 (560)
++..+||+.|+.+....++......+ .+....+ .+....++...+.+.++.++...++-+++|+++||+++|+
T Consensus 224 ~~~~~~n~~~~~ll~~~~~~~~~~~~-~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~----- 297 (473)
T PRK10429 224 VALIYKNDQLSCLLGMALAYNIASNI-INGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRRI----- 297 (473)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHH-HhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-----
Confidence 35567999988887766655433322 3223223 2333223334445566677888999999999999997543
Q ss_pred HHHHHHHHHHHHHHHHHh------hcCcchHHHHHHHHHhhhhccccchhhHHHHh-------ccCCchhhhhhHHHhhh
Q 008597 418 SFIAITLATMSVGHIVVA------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEI-------FGVGHMGTIFNTIAIAS 484 (560)
Q Consensus 418 ~~l~~~~~l~~~~~lll~------~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~-------FG~k~~g~~yG~~~~a~ 484 (560)
. +.+...+.+++.+... .+.+..+.+..++.|++.|..+.+.+++++|. .|.++-|..|+...+..
T Consensus 298 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~ 376 (473)
T PRK10429 298 L-WAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVV 376 (473)
T ss_pred H-HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHH
Confidence 2 2233333333332211 12223455667888999999999999999998 78888888999987766
Q ss_pred hhHHhhhhhhhhhhhccccc
Q 008597 485 PVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 485 ~~g~~ll~~~l~G~iyD~~g 504 (560)
-+|. .+++.+.|.+.|..|
T Consensus 377 K~~~-al~~~i~g~~l~~~G 395 (473)
T PRK10429 377 KGGS-AFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHH-HHHHHHHHHHHHHcC
Confidence 6665 356666777766554
No 92
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.25 E-value=3.3e-10 Score=122.31 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=109.8
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
.+++.+||+.|+.++...++......+.......+.+.. |.+ ...+.+..+..+...++-+++++++||+++|+
T Consensus 217 ~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~---- 291 (428)
T PF13347_consen 217 SLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK---- 291 (428)
T ss_pred chhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee----
Confidence 458899999999998888876554444344445555553 444 45566777899999999999999999997654
Q ss_pred hHHHHHHHHHHHHHHHHHh-h--cCcchHHHHHHHHHhhhhccccchhhHHHHhcc-------CCchhhhhhHHHhhhhh
Q 008597 417 PSFIAITLATMSVGHIVVA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-------VGHMGTIFNTIAIASPV 486 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~lll~-~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG-------~k~~g~~yG~~~~a~~~ 486 (560)
.+.....+.+++.+++. . ++...+++..++.|+++|..+.+..++.+|... .++-|..+++..+..-+
T Consensus 292 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~ 369 (428)
T PF13347_consen 292 --VYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI 369 (428)
T ss_pred --ehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH
Confidence 23334444444443322 2 456678888999999999999999999998774 67788888888655444
Q ss_pred HHhhhhhhhhhhhcccc
Q 008597 487 GSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 487 g~~ll~~~l~G~iyD~~ 503 (560)
+.- ++..+.|.+.+..
T Consensus 370 ~~~-la~~i~g~~l~~~ 385 (428)
T PF13347_consen 370 GQG-LAGAIVGLLLALV 385 (428)
T ss_pred HHH-HHHHHHHHHHHHh
Confidence 442 4444455554443
No 93
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.23 E-value=8.9e-11 Score=133.33 Aligned_cols=291 Identities=15% Similarity=0.083 Sum_probs=170.3
Q ss_pred cccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHH
Q 008597 32 FGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWA 110 (560)
Q Consensus 32 fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l 110 (560)
.+.--++++++++++.+|...+....+++..+ .++.|++.||++ +|+.+.+|.+++++|-+++.+
T Consensus 52 ~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~--------------r~~~i~~g~ll~~lg~ll~al 117 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLH--------------RPIVIGIGCAIMGLGSFLLSL 117 (633)
T ss_pred HHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccC--------------cceEEEecHHHHHHHHHHHhC
Confidence 34445899999999999999999999999876 788999999875 556788899999999888654
Q ss_pred HH--hccC----------------------------------------C--CCcHHHHHHHHHHhhcccchhhhhhHHHH
Q 008597 111 SV--VGLI----------------------------------------H--SPPVPLMCLFMFLAAHSQTFFNTGNVVTG 146 (560)
Q Consensus 111 ~~--~~~~----------------------------------------~--~~~~~~~~~~~~l~g~g~~~~~~~~~~t~ 146 (560)
.- .+.. . +..+..+.+.-++.|.|.+..++......
T Consensus 118 phf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i 197 (633)
T TIGR00805 118 PHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYI 197 (633)
T ss_pred hHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhh
Confidence 31 0000 0 11234455677999999999999999999
Q ss_pred hhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHHHhHHHHHhhheeeee--cC-C--CC-Cccccc
Q 008597 147 VMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILALLPTFASLLFMSLVRI--HG-T--NS-ADDKKH 219 (560)
Q Consensus 147 ~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~~~~~v~~~~~~~ir~--~~-~--~~-~~~~~~ 219 (560)
..|+| ++|+.+.|+..+...+|.++-..+ .+.+.-.++.. ++ . .. ++|.+-
T Consensus 198 ~d~~~~~~~~~~~~i~~~~~~iG~~lG~ll----------------------gg~l~~~~~d~~~~~~~~~~l~~~dprW 255 (633)
T TIGR00805 198 DDFAKSKNSPLYIGILESIAVFGPAFGYLL----------------------GSFCLQIYVDTGSVNTEDVILTPTDPRW 255 (633)
T ss_pred hccCCccccHHHHHHHHHHHHhhhHHHHHH----------------------HHHHHhcccccccCCCCCCCCCCCCccH
Confidence 99997 579999999888877777654221 11111111110 00 0 00 111110
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCc
Q 008597 220 LNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTT 299 (560)
Q Consensus 220 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (560)
...... + +.+. ++ +.++++.|+.. .+.+..+.. .++. .+..+.+.
T Consensus 256 iGaWwl-~----------------------Fli~-g~-l~~l~~v~l~~-~p~~lp~~~-~~~~--------~~~~~~~~ 300 (633)
T TIGR00805 256 IGAWWI-G----------------------FLIC-GG-VALLTSIPFFF-FPKALPKEG-KRVN--------VDVHETEK 300 (633)
T ss_pred HHHHHH-H----------------------HHHH-HH-HHHHHHHHHHh-CccccCCcc-cccc--------hhhhhhhc
Confidence 000000 0 0000 10 11111112211 111000000 0000 00000000
Q ss_pred CCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCC
Q 008597 300 STKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGY 378 (560)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~ 378 (560)
. +..+++ .+. +........-...++++|||.||...+..++..+....+...+|.+.++ +|+
T Consensus 301 ---~--~~~~~~-----~~~-------~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~ 363 (633)
T TIGR00805 301 ---L--EKSEDK-----SRK-------KNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGI 363 (633)
T ss_pred ---c--cccccc-----cch-------hhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 0 000000 000 0000000001246789999999999999888888777888899999985 699
Q ss_pred CCcchhHHHHHHHH-hhhhhccccccchhhhhh
Q 008597 379 PTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLH 410 (560)
Q Consensus 379 ~~~~aa~lvSl~si-~n~~GRl~~G~lsD~~~~ 410 (560)
++.+++.+.++..+ ...+|.++.|+++||++.
T Consensus 364 s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~ 396 (633)
T TIGR00805 364 SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL 396 (633)
T ss_pred cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence 98888888888777 568999999999999863
No 94
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.19 E-value=8.2e-09 Score=113.45 Aligned_cols=186 Identities=15% Similarity=0.192 Sum_probs=142.9
Q ss_pred CcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCC
Q 008597 337 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 415 (560)
Q Consensus 337 ~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~ 415 (560)
.|+++.-|.|+.....+++++-.-.-.+++....-+++ .+|++..+...+.-+..+.+.+|-+++|++.||++.|.+
T Consensus 272 ~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~-- 349 (477)
T PF11700_consen 272 RTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK-- 349 (477)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh--
Confidence 57788888898888877777655434444555555555 679998888777889999999999999999999985421
Q ss_pred chHHHHHHHHHHHHHHHHHh--------hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhH
Q 008597 416 RPSFIAITLATMSVGHIVVA--------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVG 487 (560)
Q Consensus 416 R~~~l~~~~~l~~~~~lll~--------~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g 487 (560)
+..+........+....+. ..++..+++..+++|+..|+..+..-++.+++-..++-+.-||+-.+..-..
T Consensus 350 -~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~s 428 (477)
T PF11700_consen 350 -RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKAS 428 (477)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHH
Confidence 2333222222222222221 3455679999999999999999999999999999999999999999888888
Q ss_pred HhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 488 SYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 488 ~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
++ +||.+.|.+-|.+|+ .|.++....++.++++++-..
T Consensus 429 s~-lGPll~g~i~~~tg~-----------~r~g~~~l~~lf~~gl~ll~~ 466 (477)
T PF11700_consen 429 SW-LGPLLFGLITDATGS-----------QRYGFLFLLVLFLIGLILLFF 466 (477)
T ss_pred HH-HHHHHHHHHHHHhCC-----------chhHHHHHHHHHHHHHHHHhh
Confidence 85 899999999999875 899999999999888865433
No 95
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.19 E-value=1.4e-09 Score=112.91 Aligned_cols=166 Identities=13% Similarity=0.125 Sum_probs=120.9
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH---cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES---LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~---lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
++.+|+|.+|+..+.+++-.+....+.++.+.+.++ .|+++.+++..++.+...-.+||++.++++||++.++
T Consensus 134 ~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~---- 209 (310)
T TIGR01272 134 TSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR---- 209 (310)
T ss_pred hhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH----
Confidence 346789999999888888888887888888888864 4888889999999999999999999999999996433
Q ss_pred hHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhh
Q 008597 417 PSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII 496 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~ 496 (560)
. +.+...+.+++.++..............++|++.+..++..-+...+.++ ++.++.-+++.+ ..+|. .+.|++.
T Consensus 210 -~-l~~~~~l~~~~~~l~~~~~~~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~-~~~~~asai~~~-~~~Gg-~i~P~l~ 284 (310)
T TIGR01272 210 -Y-LAFNAFLAVLLSIGAALTHGYVAMWFVLALGLFNSIMFPTIFSLALNALG-RHTSQGSGILCL-AIVGG-AIVPLLQ 284 (310)
T ss_pred -H-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhhhhHHHHHH-HHhcc-hHHHHHH
Confidence 2 23333333343333322222222345668899999988887777888888 556666677654 44666 3678899
Q ss_pred hhhcccccCCCCCcccCccccHHHHHHHHH
Q 008597 497 GYIYDNVASGEGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 497 G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~ 526 (560)
|.+.|+.+ ++.+|++...
T Consensus 285 G~lad~~g------------~~~a~~v~~~ 302 (310)
T TIGR01272 285 GSLADCLG------------IQLAFALPVP 302 (310)
T ss_pred HHHHHhcc------------chHHHHHHHH
Confidence 99999876 7778775443
No 96
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.16 E-value=2.7e-10 Score=120.89 Aligned_cols=170 Identities=12% Similarity=0.159 Sum_probs=137.8
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
+.+|.+....++.......+...++++.+++|.+..+.+..++...+...++.+.+|+++||+++| ..+.+...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK------HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH------HHHHHHHH
Confidence 567777776666665556677788999999999999999999999999999999999999998643 34555556
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 426 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 426 l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+.+++.++.. .+++..+++..++.|++.|...+..+.++.|.+..++.+...++...+..+|.. +++++.+.+.|..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANL-LGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHH-HhccHHHHHhhhcc
Confidence 6666665544 355667888889999999998888899999999999999999998888888884 78888899988765
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
||.+|.+.++.+++..+.
T Consensus 156 ------------wr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 156 ------------WRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred ------------HHHHHHHHHHHHHHHHHH
Confidence 999999998877666543
No 97
>PRK10504 putative transporter; Provisional
Probab=99.14 E-value=4.3e-10 Score=122.43 Aligned_cols=175 Identities=14% Similarity=0.250 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
+.+|+++..+++......++...++.+.+++|.++.+.++.++.+.+...++.+++|+++||+++|+ .+.....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~------~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN------IFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH------HHHHHHH
Confidence 4689999888887766666777889999999999988889999999999999999999999997543 3333444
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 426 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 426 l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+.+++.++.. .++...+++.-++.|++.|..++.....+.|.+..++.++.+|+...+..+|. .+++.+.|.+.|..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGP-LLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHhhcc
Confidence 4444444333 33445677788999999999999999999999999999999999988888887 478899999999765
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
|+..|.+...++.++.++.....
T Consensus 163 ------------w~~~f~~~~~~~~l~~~~~~~~~ 185 (471)
T PRK10504 163 ------------WHWIFLINIPVGIIGAIATLMLM 185 (471)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999888877776665443
No 98
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.12 E-value=1.4e-09 Score=113.76 Aligned_cols=345 Identities=16% Similarity=0.144 Sum_probs=201.9
Q ss_pred HHhhcCCChhhhh--HHHHHHhhhhh-hhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Q 008597 39 LKSSQNYDQSTLD--TVSVFKDIGAN-VGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGL 115 (560)
Q Consensus 39 l~~~~~~s~~~~~--~i~~~~~~g~~-~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~ 115 (560)
.+++...+++|.. ++=-.+.+-.. +.++.|.+.||+| .|..+++|.+..+..-.++ ++
T Consensus 95 ~~~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iG--------------y~ipm~~Gl~vmf~sTilF-----af 155 (464)
T KOG3764|consen 95 PAEAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIG--------------YKIPMVAGLFVMFLSTILF-----AF 155 (464)
T ss_pred chhccCccccccchhHHHHHHHHHHHHhcccchhhHHHhc--------------cccHHHHHHHHHHHHHHHH-----HH
Confidence 4555555555444 22222222222 3567888888876 8999999999998888874 33
Q ss_pred CCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC--CcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHHHHHHH
Q 008597 116 IHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY--GGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYLLILAL 193 (560)
Q Consensus 116 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~--RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fll~la~ 193 (560)
-+ +++.+.+-=.+.|.|+.+.+|+.+.-.++.||++ ||.++|+..++.+||-.+-.++-..+
T Consensus 156 g~--sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGil-------------- 219 (464)
T KOG3764|consen 156 GN--SYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGIL-------------- 219 (464)
T ss_pred cc--hhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccch--------------
Confidence 23 3555555569999999999999999999999974 79999999999998865542111111
Q ss_pred HhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccc
Q 008597 194 LPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQ 273 (560)
Q Consensus 194 ~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~ 273 (560)
| +..|.+.++-+++++.++-..+..+. +
T Consensus 220 ---------------------------------------Y--------e~~Gk~aPFlVL~~v~Lld~~L~l~v--i--- 247 (464)
T KOG3764|consen 220 ---------------------------------------Y--------EFAGKSAPFLVLAIVLLLDGALQLLV--I--- 247 (464)
T ss_pred ---------------------------------------H--------hhcCCcCcHHHHHHHHHHHHHHHHhe--e---
Confidence 1 33444555555544433322111111 0
Q ss_pred cccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChhHHHHHH
Q 008597 274 REDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLNFWLLFV 353 (560)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~Fwll~~ 353 (560)
+ | .+. +++ .+.++..+++.+++|+-|+...
T Consensus 248 -------------------~-p-~~~--------~~~---------------------~~~~~~~~~~Ll~dP~I~~~ag 277 (464)
T KOG3764|consen 248 -------------------E-P-TEM--------DPD---------------------STEQGTPMWSLLMDPYILLIAG 277 (464)
T ss_pred -------------------C-c-ccc--------Ccc---------------------ccccCccHHHHHhCchHhhhhc
Confidence 0 0 000 000 0112456799999999999876
Q ss_pred HHHHh-hhhhhhhhhcHHH-HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHH-HHHHHHHH
Q 008597 354 AMLCG-MGSGLATVNNISQ-IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI-TLATMSVG 430 (560)
Q Consensus 354 ~~~~~-~g~gl~~i~~~~~-i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~-~~~l~~~~ 430 (560)
....+ .+..+. =--++- +.+.+.-+..+.+..-=-.++.-.+|--+.|.+.||+.+. | |.+.+ .+.+.++.
T Consensus 278 ai~~~n~~lafL-ePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~----~-wl~~~~gl~~~G~~ 351 (464)
T KOG3764|consen 278 AITFSNSSLAFL-EPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHL----R-WLLSLGGLATVGVS 351 (464)
T ss_pred chhhccchHHHh-CcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCch----h-HHHHHHHHHHHHHH
Confidence 55333 221111 011111 2344443332433333345667788999999999998532 3 65543 33333333
Q ss_pred HHHH-hhcCcchHHHHHHHHHh----hhhccccchhhHHHHhc--cCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 431 HIVV-ASGFPGNLYVGSIIVGV----CYGCQWSLMPTITYEIF--GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 431 ~lll-~~~~~~~l~~~~~l~G~----~~G~~~~l~p~i~~e~F--G~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
+... ..++...+++.-...|+ .+....+.++.++-..- |.+-||..|++-..+..+|. .+||.+.|.++++-
T Consensus 352 ~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~-a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 352 SGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAY-AIGPTFGGSLVEAI 430 (464)
T ss_pred hchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhh-hccccccchheeeh
Confidence 3222 23444455554333333 33333333333332211 22257788888877777776 48888999999988
Q ss_pred cCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 504 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 504 g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
| |++.-.+.+..+.+-.-+..+++
T Consensus 431 G------------F~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 431 G------------FEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred h------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 99999888888877665544443
No 99
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.12 E-value=5.2e-10 Score=128.52 Aligned_cols=191 Identities=13% Similarity=0.061 Sum_probs=132.4
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhh-h--h-hhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCC
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSG-L--A-TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 414 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~g-l--~-~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~ 414 (560)
+.+.-.++..|.+++...++.... . . +...++++.+++|+++.+.+++.+++.++..+|.+++|+++||+++|
T Consensus 156 l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR--- 232 (742)
T TIGR01299 156 IQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRK--- 232 (742)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH---
Confidence 344556788887776655544321 1 1 22345666778899988889999999999999999999999999643
Q ss_pred CchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhh
Q 008597 415 ERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 493 (560)
Q Consensus 415 ~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~ 493 (560)
..+.+.+++.+++.++.. .++...++++-++.|++.|+.+++.+.+++|.++.++.+..++++.+...+|.. +++
T Consensus 233 ---~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~i-la~ 308 (742)
T TIGR01299 233 ---QCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGI-YAA 308 (742)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 444455555555544433 345566778889999999999999999999999999999999999887778774 555
Q ss_pred hhhhhhcccccCCC-CCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 494 RIIGYIYDNVASGE-GNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 494 ~l~G~iyD~~g~~~-~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
.++..+....|-+. ....+....||..|++.+..+++++++..
T Consensus 309 ~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~ 352 (742)
T TIGR01299 309 AMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALT 352 (742)
T ss_pred HHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 55544443322110 00112234589888887777766655443
No 100
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.10 E-value=1.2e-09 Score=120.93 Aligned_cols=176 Identities=15% Similarity=0.189 Sum_probs=130.9
Q ss_pred HHHhcCh-hHHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhh-hhhhcCCCc
Q 008597 340 LQSVCTL-NFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI-VLHRMGWER 416 (560)
Q Consensus 340 ~~~lkt~-~Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~-~~~~~~~~R 416 (560)
.+.+|+| .+|.++...++..++...+..+++.+. +++|.++.++...++.+........+++|+++|| +++
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~------ 87 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGT------ 87 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch------
Confidence 5566888 499999888888776666667777776 5789998888777777766666666789999999 453
Q ss_pred hHHHHHHHHHHHHHHHHHhhc--CcchHHHHHHHHHhhhhccccchhhHHHHhccCCc--hhhhhhHHHhhhhhHHhhhh
Q 008597 417 PSFIAITLATMSVGHIVVASG--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH--MGTIFNTIAIASPVGSYVCS 492 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~lll~~~--~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~--~g~~yG~~~~a~~~g~~ll~ 492 (560)
+..+.+...+.+++.+++... ....++++.++.|++.|...+..+.+++|.|..++ ....+++..++..+|+. ++
T Consensus 88 r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~-~g 166 (500)
T PRK09584 88 KRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF-FS 166 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH-HH
Confidence 344555556666666555432 22345566678899999989999999999997543 44578877777888884 78
Q ss_pred hhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 493 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 493 ~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
|.+.|++.|..| |+..|.+.++..+++.+.
T Consensus 167 p~i~g~l~~~~g------------~~~~F~i~~i~~~i~~i~ 196 (500)
T PRK09584 167 MLATPWLAAKYG------------WSVAFALSVVGMLITVVN 196 (500)
T ss_pred HHHHHHHHHhhC------------HHHHHHHHHHHHHHHHHH
Confidence 889999999775 999999988766666543
No 101
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.08 E-value=1.6e-09 Score=119.07 Aligned_cols=171 Identities=17% Similarity=0.196 Sum_probs=136.4
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHH---cCCCCcchhHHHHHHHHhhhhhccccccchhh-hhhhcCCCchHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGES---LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI-VLHRMGWERPSFIA 421 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~---lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~-~~~~~~~~R~~~l~ 421 (560)
+.+|.++...++...+..++..+++.+.++ +|.++.+++..++.+.+...++.+++|+++|| ++ |+..+.
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G------~~~~l~ 83 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWG------TKKTMV 83 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcc------hHHHHH
Confidence 357888877777666666677788888765 79999999999999999999999999999999 65 344556
Q ss_pred HHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCc---hhhhhhHHHhhhhhHHhhhhhhhhh
Q 008597 422 ITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH---MGTIFNTIAIASPVGSYVCSVRIIG 497 (560)
Q Consensus 422 ~~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~---~g~~yG~~~~a~~~g~~ll~~~l~G 497 (560)
+...+.+++++++.. +++..++++.++.|++.|...+..+++++|.|..++ .+..+++...+..+|.. +++.+.|
T Consensus 84 ~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~-ig~~l~g 162 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSF-ISPLLAG 162 (475)
T ss_pred HHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHH-HHHHHHH
Confidence 666777777766654 334456677788999999999999999999998764 77789988888888884 8888999
Q ss_pred hhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 498 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 498 ~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
++.|+.+ |+.+|.++++.++++.+..
T Consensus 163 ~l~~~~g------------~~~~f~~~~~~~~~~~l~~ 188 (475)
T TIGR00924 163 VIAENYG------------YHVGFNLAAVGMVIGLLTF 188 (475)
T ss_pred HHHHhcC------------hHHHHHHHHHHHHHHHHHH
Confidence 9998765 9999999887766665443
No 102
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.08 E-value=4e-10 Score=116.22 Aligned_cols=166 Identities=19% Similarity=0.246 Sum_probs=131.0
Q ss_pred HHHhhhhhhhhhhcHH-HHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH
Q 008597 355 MLCGMGSGLATVNNIS-QIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV 433 (560)
Q Consensus 355 ~~~~~g~gl~~i~~~~-~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~ll 433 (560)
.++......++...++ .+.+++|.++.+.+.+.++..+...++.+.+|+++||+++| ..+.+...+.+++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR------RVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe------eeEeehhhhhhhHHHH
Confidence 3333333334455666 67788899999999999999999999999999999998643 3555666666666433
Q ss_pred Hhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCccc
Q 008597 434 VAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCN 512 (560)
Q Consensus 434 l~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~ 512 (560)
... ++...+.+..++.|++.|...+....++.|.+..|+.+..+++...+..+|. ++++.+.+.+.|..+
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~~~~-------- 149 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGS-ILGPLLGGFLISYFG-------- 149 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHH-HHHHHHHHHCCCHCH--------
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhh-hcccchhhhhhhccc--------
Confidence 332 4444677788999999999999999999999999999999999999899998 588899999997765
Q ss_pred CccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 513 GTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 513 G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
++.+|++.++++++++++.....
T Consensus 150 ----~~~~~~~~~~~~~~~~il~~~~~ 172 (352)
T PF07690_consen 150 ----WRWAFLISAILSLIAAILFILFL 172 (352)
T ss_dssp ----HCCHHHHHHHHHHHHHHHHHCCC
T ss_pred ----cccccccccchhhhhhhhHhhhh
Confidence 88899999999988876544333
No 103
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.08 E-value=1.2e-09 Score=116.77 Aligned_cols=153 Identities=11% Similarity=0.175 Sum_probs=125.9
Q ss_pred hhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 008597 361 SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP 439 (560)
Q Consensus 361 ~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~ 439 (560)
...+....++++.+++|.++++.+..++...+...++++++|.++||++|| ..+.....+.+++.++.. .++.
T Consensus 35 ~~~~~~~~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~ 108 (394)
T PRK10213 35 VEFLPVSLLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR------YVVILFAVLLTLSCLLVSFANSF 108 (394)
T ss_pred HHHHHHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH------HHHHHHHHHHHHHHHHHHHHChH
Confidence 333455678899999999999999999999999999999999999998643 455556666666665544 3455
Q ss_pred chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHH
Q 008597 440 GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFML 519 (560)
Q Consensus 440 ~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~ 519 (560)
..+++.-++.|++.|..++..+.++.|.+..|+.+.+.++...+..+|. +++|++.+.+.+..+ |+.
T Consensus 109 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~-~ig~~l~~~l~~~~g------------w~~ 175 (394)
T PRK10213 109 SLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIAL-VIAAPLGSFLGELIG------------WRN 175 (394)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcC------------HHH
Confidence 6788888999999999999999999999999999999999988888887 488899999998765 999
Q ss_pred HHHHHHHHHHHHH
Q 008597 520 SFLIMASVAFVGC 532 (560)
Q Consensus 520 ~f~i~~~l~~la~ 532 (560)
.|.+.+.++++..
T Consensus 176 ~f~~~~~l~~~~~ 188 (394)
T PRK10213 176 VFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 9999887665544
No 104
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.07 E-value=1.2e-09 Score=115.93 Aligned_cols=174 Identities=18% Similarity=0.265 Sum_probs=153.4
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
...|.+.+.-|+.....+++..-++++++++|.+..+++.++|+++..-++|-++...++||+ +|+..+...+.
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~------~Rr~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL------ERRRLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc------chHHHHHHHHH
Confidence 356677777777778899999999999999999999999999999999999999999999998 56667777778
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 426 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 426 l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+.+++.++.+ .++...+.++=++.|++-|.+|++.-++.+++-.+++.+..-+++..+..++. ++|.|+..++-|..|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~-v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLAT-VLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHH-HHhccHHHHHHHHhh
Confidence 8888888765 35667788889999999999999999999999999999999999999888887 689999999999998
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
||.+|.+.+++++++.+.....
T Consensus 166 ------------WR~~F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 166 ------------WRATFLAIAVLALLALLLLWKL 187 (394)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999998887544433
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.07 E-value=1.5e-08 Score=108.62 Aligned_cols=186 Identities=15% Similarity=0.206 Sum_probs=124.2
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhhhhhhh-cHHHHHHHcCCCC----cchhHHHHHHHHhhhhhccccccchhhhhhhcC
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSGLATVN-NISQIGESLGYPT----SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 413 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~gl~~i~-~~~~i~~~lG~~~----~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~ 413 (560)
.++.+|+|+||.+.+ +.++..+...+.. +.+.+.++..-++ ...+.+.|+--+.++..-.+.+++-+|++.|+
T Consensus 213 ~~~l~k~~~fw~~~l-~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~- 290 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVL-FVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKN- 290 (412)
T ss_dssp HHHHTTSHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-
T ss_pred HHHHhcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHh-
Confidence 468999999999755 3333333333332 3344555543332 23355677778888888888888888887543
Q ss_pred CCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH-HhhhhhHHhhh
Q 008597 414 WERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI-AIASPVGSYVC 491 (560)
Q Consensus 414 ~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~-~~a~~~g~~ll 491 (560)
.+.++...+++=..... .+++..+.+.=.+=|+-++......--.+++.|..|-.++.|.+. .++..+|..++
T Consensus 291 -----~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~ 365 (412)
T PF01306_consen 291 -----LLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIIL 365 (412)
T ss_dssp -----HHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444434433 345555555667777777766666667788999988889999886 57888888765
Q ss_pred hhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008597 492 SVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRR 544 (560)
Q Consensus 492 ~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~ 544 (560)
+ +++|.+||+.| |+.+|++++.+.+...+++.....++|+
T Consensus 366 s-~~~G~lyd~~G------------~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 366 S-PLAGYLYDRIG------------FQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp H-HHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred h-hhHHhhHhhcC------------cHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 5 68999999998 9999999999888888787776654444
No 106
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.07 E-value=1.6e-09 Score=117.19 Aligned_cols=172 Identities=17% Similarity=0.177 Sum_probs=132.6
Q ss_pred cChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 344 CTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 344 kt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
|...++..++.+++.......+...++++.+++|.+..+.+.++++..+...++++.+|+++||+++| ..+.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r------~~~~~~ 94 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR------YFMGIG 94 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc------hhHHHH
Confidence 33455555555555554444555667889999999999999999999999999999999999999643 344555
Q ss_pred HHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccc
Q 008597 424 LATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 502 (560)
Q Consensus 424 ~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~ 502 (560)
..+.+++.++.. .+++..+.+.-++.|++.|..++....++.|.|..|+.+...|+...+..+|.. +++.+.|.+.|.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~ 173 (434)
T PRK11663 95 LIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGA-LIPLVVGAIALH 173 (434)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHc
Confidence 566666665544 334445566667789999988899999999999999999999999888888884 788889999987
Q ss_pred ccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 503 VASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 503 ~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
.+ |+..|.+.++++++..++
T Consensus 174 ~g------------w~~~f~~~~i~~~~~~~~ 193 (434)
T PRK11663 174 YG------------WRYGMMIAGIIAIVVGLF 193 (434)
T ss_pred cc------------HHHHHHHHHHHHHHHHHH
Confidence 65 999999988776655433
No 107
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.07 E-value=2.4e-08 Score=108.27 Aligned_cols=145 Identities=11% Similarity=-0.075 Sum_probs=110.6
Q ss_pred hhHHH--HHHHHHHHHhcCcccccccccHHHHhhcCCChhh-hhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccc
Q 008597 11 SKWIA--TVASIWIQCCSGATYTFGIYSSTLKSSQNYDQST-LDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSF 86 (560)
Q Consensus 11 ~rw~~--l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~-~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~ 86 (560)
+.|.- ++.|++- ...-.--..++-.+.+++.+|+|.+| .+.+..+...+-.+ -+++|++.||+|
T Consensus 23 ~~W~~~~~~lC~fG-F~~e~R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG----------- 90 (511)
T TIGR00806 23 KSWRVLVLYLCFYG-FMAQFRPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLR----------- 90 (511)
T ss_pred cchhHHHHHHHHHH-HHHHhhchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC-----------
Confidence 44653 3344442 22234556677789999999999999 66666666555544 789999999987
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhh
Q 008597 87 LRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFL 165 (560)
Q Consensus 87 ~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~ 165 (560)
+|+++.++.+..++-..++ +... +++.+.+.=++.|.+.+... +......+|||+ +||+++|+..++.
T Consensus 91 ---~K~vL~l~~l~Wsl~t~L~-----~fa~--Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~ 159 (511)
T TIGR00806 91 ---YKPVLVLQALSFVCVWLLL-----LLGT--SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAV 159 (511)
T ss_pred ---chHHHHHHHHHHHHHHHHH-----HHHH--HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 9999999988888877774 3322 25667777788899999999 999999999985 7999999999999
Q ss_pred hhhHHHHHHHHHH
Q 008597 166 GLGGAALIQAYDT 178 (560)
Q Consensus 166 GLsa~i~s~i~~~ 178 (560)
-+|.++-..+...
T Consensus 160 ~vG~~Ia~~L~ql 172 (511)
T TIGR00806 160 LLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHHHH
Confidence 9999988755543
No 108
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.06 E-value=1.1e-07 Score=102.24 Aligned_cols=185 Identities=19% Similarity=0.174 Sum_probs=115.9
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcC-CCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLG-YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG-~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
+.++++|+|++....+..++...+--.+.+..+.+.+++| .+....+.+.++-.++- +..=.+++|+.+|.+ -
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aE----i~~f~~~~~~~~r~g--~ 272 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAE----IPFFFFSGRFLKRFG--I 272 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHH----HHHHHHHHHHHHhcC--H
Confidence 3478999999998777666665555455566677788988 55555554444433333 344445566666654 2
Q ss_pred hHHHHHHHHHHHHHHHHHhhc-CcchH-HH----HHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHh-hhhhHHh
Q 008597 417 PSFIAITLATMSVGHIVVASG-FPGNL-YV----GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSY 489 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~lll~~~-~~~~l-~~----~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~-a~~~g~~ 489 (560)
++.+.++....++=..+++.. ++... +. .-++-|++||..+......+.+....+..++.-++... ..++|..
T Consensus 273 ~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~ 352 (400)
T PF03825_consen 273 KWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGA 352 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHH
Confidence 234444444444433344332 33222 21 23457999999999999999999999999999998743 5677774
Q ss_pred hhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 490 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 490 ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
++..+.|++||+.|.+. .--|...|.+.+++.++..++-
T Consensus 353 -iG~~igG~l~~~~g~~~------~~~~~~~~~v~a~~~~~~~~~f 391 (400)
T PF03825_consen 353 -IGSLIGGWLYDAFGARG------MFDWSAVFLVFAVMALVILVLF 391 (400)
T ss_pred -HHHHHHHHHHHHhcchh------hhhHHHHHHHHHHHHHHHHHHH
Confidence 77789999999987421 1113444555555554544433
No 109
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=1.5e-09 Score=113.89 Aligned_cols=173 Identities=14% Similarity=0.148 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHhhh-hhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMG-SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g-~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
+.++.+...+.+... ...++....+.+.+++|.++.+.+...+++.+.+.++.+++|+++||+++| ..+....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r------~~~~~~~ 77 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR------PVLLLGL 77 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh------HHHHHHH
Confidence 344444443433332 333445667888899999999999999999999999999999999999643 3344455
Q ss_pred HHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 425 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 425 ~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
.+.+++.++.. .++...+.+..++.|++.+........++.|.+..++.+..+|+......+|.. +++.+.|.+.|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~ 156 (385)
T TIGR00710 78 FIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPA-VAPLLGGYILVWL 156 (385)
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHc
Confidence 55556555443 345556777888999999999999999999999999999999999888888874 7888899988876
Q ss_pred cCCCCCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 504 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 504 g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
+ |+.+|.+.++++++..++..+
T Consensus 157 ~------------~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 157 S------------WHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred C------------HHHHHHHHHHHHHHHHHHHHH
Confidence 5 899999988877776655444
No 110
>PRK10054 putative transporter; Provisional
Probab=99.05 E-value=1.8e-09 Score=115.62 Aligned_cols=174 Identities=10% Similarity=0.049 Sum_probs=129.9
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
+++|.+.+..++......+....++++.+ ++|.++.+.+..+++..+...++++..|+++||+++|+ .+.+..
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~------~~~~~~ 80 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR------YMLLAI 80 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch------hHHHHH
Confidence 45888888777776555555667777664 67999999999999999999999999999999997543 333444
Q ss_pred HHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 425 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 425 ~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
.+.+++.+++. .++...+++...+.|.+++...+..+....|.++.++.+..+|+......+|. .++|++.|.+++ .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~-~igp~l~~~l~~-~ 158 (395)
T PRK10054 81 TAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGW-TVGPPLGTLLVM-Q 158 (395)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-h
Confidence 44455554443 33444455555667777777778888899999999999999999987777777 478888888875 3
Q ss_pred cCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 504 ASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 504 g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
+ |+.+|.+.+++++++.++..+..
T Consensus 159 g------------~~~~f~~~~~~~~i~~i~~~~~~ 182 (395)
T PRK10054 159 S------------INLPFWLAAICSAFPLVFIQIWV 182 (395)
T ss_pred c------------cCcHHHHHHHHHHHHHHHHHHHH
Confidence 3 88999998888877765544433
No 111
>PRK11462 putative transporter; Provisional
Probab=99.05 E-value=4.3e-08 Score=107.37 Aligned_cols=139 Identities=7% Similarity=-0.019 Sum_probs=77.3
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCch
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERP 417 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~ 417 (560)
.+++.+||+.|+.+....++..............+.+...-+++..+.+..+..+.+.+|-+++++++||+++|+
T Consensus 220 ~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~----- 294 (460)
T PRK11462 220 DLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVT----- 294 (460)
T ss_pred HHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHH-----
Confidence 356788999998886555444322222222223333333222233345667888999999999999999987543
Q ss_pred HHHHHHHHHHHHHHHHHhh--cCcchHHHHHHHHHhhhhccccchhhHHHHh-------ccCCchhhhhhHHH
Q 008597 418 SFIAITLATMSVGHIVVAS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEI-------FGVGHMGTIFNTIA 481 (560)
Q Consensus 418 ~~l~~~~~l~~~~~lll~~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~-------FG~k~~g~~yG~~~ 481 (560)
............+.++... .....+++..++.|++.+....+...+++|. .|.++-|..|+...
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~ 367 (460)
T PRK11462 295 IFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTL 367 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHH
Confidence 2221111111212222211 1222344455667777776666656666665 56777787777753
No 112
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.05 E-value=3e-08 Score=108.83 Aligned_cols=389 Identities=12% Similarity=0.019 Sum_probs=210.5
Q ss_pred HHhcCccccc-ccccHHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHH
Q 008597 23 QCCSGATYTF-GIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILC 101 (560)
Q Consensus 23 ~~~~G~~Y~f-s~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~ 101 (560)
-.+.|..+.- ..-++-+++++|+|.+|++.+.....+.-.+-++.|++.|+++..-+| .|+.++++.++.
T Consensus 35 y~~qGl~~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l~g~l~D~~~i~G~r---------Rr~~l~~~~~l~ 105 (468)
T TIGR00788 35 LFVKGIAGLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPFAGVMSDTFPLFGYT---------KRWYLVLSGLLG 105 (468)
T ss_pred HHHhhHHHHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc---------chHHHHHHHHHH
Confidence 3556665222 234477888899999999877777778878877899999999633233 355666776665
Q ss_pred -HHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhh---hhHHHHHHHHH
Q 008597 102 -FAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLG---LGGAALIQAYD 177 (560)
Q Consensus 102 -~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~G---Lsa~i~s~i~~ 177 (560)
.+++..+ . ..++ .........++.+.+.+..|.++=.-.++..+++++...++....++ +|..+-+.+.-
T Consensus 106 ~~~~~~~l----~-~~~~-~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G 179 (468)
T TIGR00788 106 SAILYGLL----P-GKVS-SAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGG 179 (468)
T ss_pred HHHHHHhc----c-cccc-hHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHH
Confidence 3444332 1 1111 12334445677889999999999899999999666555555544444 34433322111
Q ss_pred HhcCCCchhHHHHHHHHhHHHHHhhheeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Q 008597 178 TIWKGRPSTYLLILALLPTFASLLFMSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLF 257 (560)
Q Consensus 178 ~~f~~~~~~fll~la~~~~~v~~~~~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
.+. +..+....+.+..+..
T Consensus 180 ~l~-------------------------------------------------------------~~~~~~~~f~~~a~l~ 198 (468)
T TIGR00788 180 PLL-------------------------------------------------------------DKTLTRILFLITAALL 198 (468)
T ss_pred HHH-------------------------------------------------------------HhcCcchHHHHHHHHH
Confidence 111 0001011111110110
Q ss_pred HHHHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccC
Q 008597 258 LLFLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDM 337 (560)
Q Consensus 258 ~~~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (560)
++. ..+. ...+ ++++ . ..++..+ + +..... ... ....+. ...+-.
T Consensus 199 ll~--~~~~-~~~~----E~~~-~-----------~~~~~~~--~---~~~~~~-----~~~---~~~~~~---~~~~~~ 243 (468)
T TIGR00788 199 LLQ--LFVS-NLSK----ERRA-F-----------VRPRIGT--Y---LEMNMA-----LLT---LGVLAN---VKVQIL 243 (468)
T ss_pred HHH--HHHH-Hhcc----cccc-c-----------ccccccc--c---chhhhh-----hhh---hhHHHH---HHHHHH
Confidence 011 0000 0010 0000 0 0000000 0 000000 000 000000 000012
Q ss_pred cHHHHhcChhHHHHHHHHHH--hhhhhhhhhhcHH-HHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCC
Q 008597 338 NILQSVCTLNFWLLFVAMLC--GMGSGLATVNNIS-QIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGW 414 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~--~~g~gl~~i~~~~-~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~ 414 (560)
..++.+++|..|......++ ..+.+. .++.- ...+.+|+++...+...++.++++.+|-.+.+.+.+|+
T Consensus 244 ~l~~~l~~~~i~~~l~fifl~~~~~~~~--~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~------ 315 (468)
T TIGR00788 244 GLRGAIQLLEIAKPLIFIFLSYANLPGA--SGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF------ 315 (468)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHhhcCCC--CceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC------
Confidence 35677899999874333333 222222 11110 01135799999999888888888887777777665544
Q ss_pred CchHHHHHHHHHHHHHHHHHh-----h------cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhh
Q 008597 415 ERPSFIAITLATMSVGHIVVA-----S------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIA 483 (560)
Q Consensus 415 ~R~~~l~~~~~l~~~~~lll~-----~------~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a 483 (560)
+.+..+.+...+.+++.++.. . +....+....++-++++|..+...-.++++.-..++-|+.|++....
T Consensus 316 ~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~ 395 (468)
T TIGR00788 316 PYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASI 395 (468)
T ss_pred CHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHH
Confidence 333455555555555443211 0 11123344578889999999999999999999999999999999777
Q ss_pred hhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 484 SPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 484 ~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
..+|.. +++.+.|.++|..|.. .+.|+.-|....+.++..++...++
T Consensus 396 ~~lg~~-v~~~~gg~l~~~~g~~-------~~~~~~~~~~i~i~~~~~l~~l~~~ 442 (468)
T TIGR00788 396 LHLGSS-VSGFLGVLLMETIGIT-------CDNSNNLWLLILGHSLAPLLPLPLL 442 (468)
T ss_pred HHHHHH-HHHHHHHHHHHHcCCC-------cccccchHHHHHHHHHHHHHHHHHH
Confidence 788874 6777888899887732 2236666665555554444433333
No 113
>PRK03545 putative arabinose transporter; Provisional
Probab=99.04 E-value=1.8e-09 Score=114.83 Aligned_cols=171 Identities=14% Similarity=0.173 Sum_probs=131.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
.+|.+.+..++...........++++.+++|.++.+.++.++.+.+...++.+.+|.++||+++| ..+.....+
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~ 83 (390)
T PRK03545 10 RVVTLALAAFIFNTTEFVPVGLLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR------KLLIGLFVL 83 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHcchHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH------HHHHHHHHH
Confidence 45555444333322222233457899999999999999999999999999999999999999643 445555666
Q ss_pred HHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 427 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 427 ~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
.+++.++.. .++...+++.-++.|++.|..++....++.|.+..++.+...|+...+..+|. .+++++.+.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~-~ig~~l~~~l~~~~g- 161 (390)
T PRK03545 84 FIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAM-VLGLPLGRVIGQYLG- 161 (390)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHH-HHHhhHHHHHHHHhc-
Confidence 666665544 35556677777889999988888888999999999999999999998888888 478888888888765
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
++..|.+.++++++..++..
T Consensus 162 -----------w~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 162 -----------WRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHH
Confidence 99999999988776654443
No 114
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.04 E-value=9.7e-07 Score=97.36 Aligned_cols=158 Identities=15% Similarity=0.061 Sum_probs=97.8
Q ss_pred ccccccccc-HHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhc-cccccccccccccCCcHHHHHHHHHHHHHH
Q 008597 28 ATYTFGIYS-STLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFA-TLNHHHRTRFSFLRGPWVVHLTGAILCFAG 104 (560)
Q Consensus 28 ~~Y~fs~ys-~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~-g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G 104 (560)
..|.+..+- .-+++++|+++++...+........++ .+++|++.||+ | +|+++++|.++..+|
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilG--------------rrr~iliG~il~~lg 89 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLG--------------NRMAVMLGALLMAIG 89 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--------------cHHHHHHHHHHHHHH
Confidence 456555444 445677999999999776666666665 67899999998 6 899999999999999
Q ss_pred HHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC---CCcceeeehhhhhhhhHHHHHHHHHHhcC
Q 008597 105 YFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD---YGGTIVGIMKGFLGLGGAALIQAYDTIWK 181 (560)
Q Consensus 105 ~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~---~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~ 181 (560)
++++.. .+. +... .+... .+...|.+......-....+.||+ +|+.+.++.-.+..+|+.+-..+...+.+
T Consensus 90 ~lll~~--~~~--~~~~-~~l~l-~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~ 163 (493)
T PRK15462 90 HVVLGA--SEI--HPSF-LYLSL-AIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQE 163 (493)
T ss_pred HHHHHH--hhc--chhH-HHHHH-HHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHh
Confidence 876531 111 1111 12111 222344444443333445788985 59999999998888887776666655543
Q ss_pred CCchhHHHHHHHHhHHHHHhhhee
Q 008597 182 GRPSTYLLILALLPTFASLLFMSL 205 (560)
Q Consensus 182 ~~~~~fll~la~~~~~v~~~~~~~ 205 (560)
.......+.++.....++++...+
T Consensus 164 ~~Gw~~~F~iaaigm~l~li~~~~ 187 (493)
T PRK15462 164 EYSWAMGFGLAAVGMIAGLVIFLC 187 (493)
T ss_pred hhChHHHHHHHHHHHHHHHHHHHH
Confidence 322233333333344444444333
No 115
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.03 E-value=1e-12 Score=141.98 Aligned_cols=379 Identities=16% Similarity=0.138 Sum_probs=206.1
Q ss_pred hhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCC-CcHHHHHH
Q 008597 49 TLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHS-PPVPLMCL 126 (560)
Q Consensus 49 ~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~-~~~~~~~~ 126 (560)
+.+.+.....+|..+ +++.|.+.||+| +|+++.++.++..+|..+ ....+. .+++.++.
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~G--------------Rk~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~ 107 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYG--------------RKPALIISALLMIIGSIL-----IAFAPSYNNFWMLLI 107 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccc--------------cccccccccccccccccc-----ccccccccccccccc
Confidence 345666777788877 567888888876 889999999999999988 344331 13455665
Q ss_pred HHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcC---CCchhHHHHHHHHhHHHHHhh
Q 008597 127 FMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWK---GRPSTYLLILALLPTFASLLF 202 (560)
Q Consensus 127 ~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~---~~~~~fll~la~~~~~v~~~~ 202 (560)
.=++.|.|.|..++.........=| ++||....+...+..+|..+-..+....-. ++....++.+...|.++.++.
T Consensus 108 ~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~ 187 (451)
T PF00083_consen 108 GRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLL 187 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6678899999888888877777765 579999999998888876655433322211 122334444444444332222
Q ss_pred heeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCC
Q 008597 203 MSLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSP 282 (560)
Q Consensus 203 ~~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~ 282 (560)
..++ |+++ + |+ ..+.+.++
T Consensus 188 ~~~~---pESP-----~-------------wL----------------------------------------~~~~~~~~ 206 (451)
T PF00083_consen 188 RFFL---PESP-----R-------------WL----------------------------------------LSKGRDEE 206 (451)
T ss_pred cccc---cccc-----c-------------ee----------------------------------------cccccccc
Confidence 2222 1110 0 00 00000001
Q ss_pred CcccCCCCCCCC--CCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHhcChh----HHHHHHHHH
Q 008597 283 TFATQRSPLVDC--PETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSVCTLN----FWLLFVAML 356 (560)
Q Consensus 283 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~lkt~~----Fwll~~~~~ 356 (560)
+. ..+++ .++..++ +.+++ . ++.+..++++.+++++++++. +........
T Consensus 207 A~-----~~l~~~~~~~~~~~------~~~~~-----~--------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~ 262 (451)
T PF00083_consen 207 AE-----KVLRKLRGKEIEDE------EIEEI-----K--------AEKKESQESKASWRDLFRNKKYRKRLLIALLLQF 262 (451)
T ss_pred cc-----cccccccccccccc------ccccc-----c--------cccccccccceeeeeccccccccccccccccccc
Confidence 00 00000 0000000 00000 0 000000111145566666643 112222222
Q ss_pred Hhhhhhhhhh-hcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh
Q 008597 357 CGMGSGLATV-NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA 435 (560)
Q Consensus 357 ~~~g~gl~~i-~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~ 435 (560)
+....|...+ +..+.+.+..|.++. -....+.++.+.++.++..++.||++||+ .+.....+++++.+.+.
T Consensus 263 ~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~------~~i~~~~~~~~~~~~~~ 334 (451)
T PF00083_consen 263 FQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRK------LLIIGLLLMAICSLILG 334 (451)
T ss_pred cccccccccccccccccccccccccc--ccccccccccccccccccccccccccccc------ccccccccccccccccc
Confidence 2223343333 344666677777665 12223666888889999999999997543 23333333333333221
Q ss_pred ------hcC----cchHHHHHHHHHhhhhccccchh-hHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 436 ------SGF----PGNLYVGSIIVGVCYGCQWSLMP-TITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 436 ------~~~----~~~l~~~~~l~G~~~G~~~~l~p-~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
.+. .........+....++..+...+ .+++|.|..+.+++..|+......+++. +.+.+...+.|..+
T Consensus 335 ~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~-i~~~~~~~~~~~~~ 413 (451)
T PF00083_consen 335 IIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGF-IIPFLFPYLFNNLG 413 (451)
T ss_pred cccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccccccc-cccccccccccccc
Confidence 111 11122223333345554444444 7779999999999999999776667774 55566667676653
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLR 552 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~ 552 (560)
....|.+.+++++++.+........+|++--++++|
T Consensus 414 ------------~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 414 ------------GWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQE 449 (451)
T ss_pred ------------ccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHh
Confidence 235677777777777766666666777766666554
No 116
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.02 E-value=2.9e-09 Score=106.85 Aligned_cols=150 Identities=17% Similarity=0.197 Sum_probs=108.9
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
.|.||++..+.++-.-+-.-.|.--+-..++ .|+++.+++...|.....+++-..+.|.++||.+++. |+...+
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~-----~wv~~a 337 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNL-----WWVASA 337 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhccee-----hhHHHH
Confidence 4789999887766654444444444444454 4999999999999999999999999999999998543 555556
Q ss_pred HHHHHHHHHHHhhcCcchHHHHHHHHHhhhhc----cccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 424 LATMSVGHIVVASGFPGNLYVGSIIVGVCYGC----QWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 424 ~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~----~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
.++..+++..+.++. ..-|++..+.|++|.- .|+..|.++.| ++.|+.||++..-.-+|- .+.|.++|.+
T Consensus 338 ~~~tl~~H~~l~Ft~-lsPy~~m~~lGLsysllAcslWP~va~~vpE----~qLGTaygf~qsIqNLgl-a~i~Iiag~i 411 (459)
T KOG4686|consen 338 CILTLLGHSGLFFTF-LSPYTSMTFLGLSYSLLACSLWPCVASLVPE----EQLGTAYGFIQSIQNLGL-AFIPIIAGFI 411 (459)
T ss_pred HHHHHHHhhhHHhhh-ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCH----HHhcchHHHHHHHHhhhh-hHHhhhhhee
Confidence 666667776555432 2456777888888765 45566666665 899999999976666665 3567789999
Q ss_pred cccccC
Q 008597 500 YDNVAS 505 (560)
Q Consensus 500 yD~~g~ 505 (560)
.|..|+
T Consensus 412 ~d~~g~ 417 (459)
T KOG4686|consen 412 ADGDGS 417 (459)
T ss_pred ecCCCc
Confidence 998875
No 117
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.01 E-value=1.6e-09 Score=112.05 Aligned_cols=172 Identities=12% Similarity=-0.003 Sum_probs=131.3
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
||.++...++......+....++.+.++.+.++.+.+.+.++..+...++.+.+|+++||+++| ..+.+...+.
T Consensus 1 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r------~~~~~~~~~~ 74 (365)
T TIGR00900 1 FRLLFAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK------KVMIGADLIR 74 (365)
T ss_pred CeehHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh------HHHHHHHHHH
Confidence 4556666666555544555666778888899888899999999999999999999999999644 3334444444
Q ss_pred HHHHHHHh-hc-----CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 428 SVGHIVVA-SG-----FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 428 ~~~~lll~-~~-----~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
+++.++.. .. +...+++..++.|++.|...+...++++|.+..++.+..+|+...+..+|. ++++.+.+.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~l~~~l~~ 153 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFY-IVGPGIGGLMYA 153 (365)
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHH
Confidence 44333222 22 445677788889999999999999999999999999999999999888888 488889999998
Q ss_pred cccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 502 NVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 502 ~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
..+ ++..|.+.+..++++.++...+
T Consensus 154 ~~g------------~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 154 TLG------------IKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred Hhh------------HHHHHHHHHHHHHHHHHHHHhc
Confidence 765 8999988887776665444333
No 118
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.01 E-value=9.2e-08 Score=106.36 Aligned_cols=183 Identities=11% Similarity=0.083 Sum_probs=119.4
Q ss_pred HhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHH
Q 008597 342 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFI 420 (560)
Q Consensus 342 ~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l 420 (560)
..++|....+.+..++....+..+...+|-+++ .+|.++..-+.+.+.++++..+|-++.+.+.+++. +...+
T Consensus 214 v~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~------~~~lv 287 (524)
T PF05977_consen 214 VRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLS------SRRLV 287 (524)
T ss_pred HhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccC------cchhh
Confidence 444565554433222222222233445677765 46888787888899999988888888887766553 22333
Q ss_pred HHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 421 AITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 421 ~~~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
..+..+.+++++.+.. ++.+...+..++.|++........-+++-+.--.+..|..+++..+... |+..+|..+.|.+
T Consensus 288 ~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~-g~~~lGsll~G~l 366 (524)
T PF05977_consen 288 LLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFF-GGMPLGSLLWGFL 366 (524)
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 4455555666655554 3334455667888999988888888878788888889998888755333 3334677789999
Q ss_pred cccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008597 500 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 543 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r 543 (560)
.|..| -+.++.++++..+++.++......+++
T Consensus 367 a~~~g------------~~~al~~a~~~lll~~~~~~~~~l~~~ 398 (524)
T PF05977_consen 367 ADHFG------------VRTALLIAGAALLLSALIALRFPLRQG 398 (524)
T ss_pred HHHhC------------HHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 99887 677888877766666665554444433
No 119
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.00 E-value=9.3e-10 Score=114.38 Aligned_cols=156 Identities=17% Similarity=0.238 Sum_probs=123.9
Q ss_pred hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 008597 364 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 442 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l 442 (560)
++....+.+.+++|.++.+.+.+.++..+.+.++.+.+|+++||+++|+ .+.+...+.+++.++.. .++...+
T Consensus 12 ~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK------TLAVFIVIWGVFTGLQAFAGAYVSL 85 (399)
T ss_pred hhhHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce------eeHHHHHHHHHHHHHHHHHcCHHHH
Confidence 3344556677888999999999999999999999999999999997543 23344444455544433 3455677
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHH
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 522 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~ 522 (560)
++..++.|++.|..++..+.++.|.+..|+.+...|+......+|. ++++.+.+.+.|..+ |+..|.
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~~~~~~~~l~~~~~------------~~~~~~ 152 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGG-IIGGPLVGWILIHFS------------WQWAFI 152 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHH-HHHHHHHHHHHHhCC------------chHHHH
Confidence 8888999999999999999999999999999999999988888888 478888998888765 899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 523 IMASVAFVGCLVAFLL 538 (560)
Q Consensus 523 i~~~l~~la~vl~l~l 538 (560)
+.++++++..++....
T Consensus 153 ~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 153 IEGVLGIIWGVLWLKF 168 (399)
T ss_pred HHHHHHHHHHHHhhhe
Confidence 9888877766554443
No 120
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.00 E-value=1.7e-07 Score=104.91 Aligned_cols=418 Identities=12% Similarity=0.008 Sum_probs=211.9
Q ss_pred HHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Q 008597 37 STLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGL 115 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~ 115 (560)
+.+-..+|-+ .+...++++..++... -++.|.+.|.+| +|..+++|.++..+|..+ .+.
T Consensus 68 ~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfG--------------Rr~~~i~g~~l~vvG~Iv-----~at 127 (599)
T PF06609_consen 68 PYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFG--------------RRYFFIIGSLLGVVGSIV-----CAT 127 (599)
T ss_pred HHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhc--------------chHHHHHHHHHHHhHHHH-----hhc
Confidence 4555667654 5566788888888776 556788888876 899999999999999998 344
Q ss_pred CCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcC-CCchhHHHHHHH
Q 008597 116 IHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWK-GRPSTYLLILAL 193 (560)
Q Consensus 116 ~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~-~~~~~fll~la~ 193 (560)
.++ +-.++.=.++.|.|.|......+. ...--| |+|+...++....+-....+-..+.+.+.. ++-+.-+++..+
T Consensus 128 A~~--~~~~iag~~l~GvgaG~~~~~~~~-isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i 204 (599)
T PF06609_consen 128 AQN--MNTFIAGMVLYGVGAGVQELAALA-ISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFII 204 (599)
T ss_pred CCc--HHHHHHHHHHHHHhhHHHHHHHHH-HHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHH
Confidence 333 445666667777777766665544 344456 458765554433322211111223334433 233333333333
Q ss_pred HhHHHHHhhheeeeecCCCC-Cccc----cchhhhhHHHHH-----HHHHHHHHHHHhcccccchhHHHHHHHHHHHHhh
Q 008597 194 LPTFASLLFMSLVRIHGTNS-ADDK----KHLNAFSAVALT-----IAAYLMIIIILENIFTFPLWARIITFLFLLFLLS 263 (560)
Q Consensus 194 ~~~~v~~~~~~~ir~~~~~~-~~~~----~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 263 (560)
...+..++.++|-++++... +.++ +.+.++=.+|.+ ++.||+-.....+....-++.+++..++.-..++
T Consensus 205 ~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~L 284 (599)
T PF06609_consen 205 WSGIALVLIFFFYFPPPRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLL 284 (599)
T ss_pred HHHHHHHHHHHHhCCCchhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHH
Confidence 33333334444554444322 1111 112222223322 2334333222222111112233322111111111
Q ss_pred cccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHHHHh
Q 008597 264 SPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNILQSV 343 (560)
Q Consensus 264 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l 343 (560)
+.. ... |. ... .++.+-+.+++
T Consensus 285 -v~F-~~w------E~------------------------------------------------~~~--~~~Pl~P~~Lf 306 (599)
T PF06609_consen 285 -VAF-VVW------EW------------------------------------------------FGA--PKDPLFPHRLF 306 (599)
T ss_pred -HHH-HHh------hh------------------------------------------------hcc--CCCCcCCHHHh
Confidence 110 010 00 000 00014456788
Q ss_pred cC-hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCC---cchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchH
Q 008597 344 CT-LNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPT---SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 418 (560)
Q Consensus 344 kt-~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~---~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~ 418 (560)
|+ +.|+...+..++....-+...+..|+..... +-+. ...+......+.+.++|-++.|++.-+++| - +|
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~----~-Kw 381 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRH----I-KW 381 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccc----h-hH
Confidence 87 5688766555554333344445667766654 3322 234555667888888888889988766532 2 25
Q ss_pred HHHHHHHHHHHHHHHHh---hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhh
Q 008597 419 FIAITLATMSVGHIVVA---SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 495 (560)
Q Consensus 419 ~l~~~~~l~~~~~lll~---~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l 495 (560)
.+.+...++.+.+-+++ .++....+...++.|++.|..-...-.++.-..-.++.|+.-|++...-.+|+- .+.-+
T Consensus 382 ~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGs-Ig~aI 460 (599)
T PF06609_consen 382 QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGS-IGYAI 460 (599)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhH-HHHHH
Confidence 55444444443322222 233344555677888887764433333333334467888888888544444332 12222
Q ss_pred hhhhcccccCCC----------------------------------------C-----------CcccCccccHHHHHHH
Q 008597 496 IGYIYDNVASGE----------------------------------------G-----------NSCNGTHCFMLSFLIM 524 (560)
Q Consensus 496 ~G~iyD~~g~~~----------------------------------------~-----------~~C~G~~cy~~~f~i~ 524 (560)
+..++...-.++ + ...+ .+.|+.+|+..
T Consensus 461 y~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aY-a~ay~~V~~~s 539 (599)
T PF06609_consen 461 YNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAY-AHAYRYVYYSS 539 (599)
T ss_pred HHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 322222110000 0 0111 34699999999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 008597 525 ASVAFVGCLVAFLLFIRT 542 (560)
Q Consensus 525 ~~l~~la~vl~l~l~~r~ 542 (560)
....+++++.++++...+
T Consensus 540 iaFG~vaiiaa~fl~d~~ 557 (599)
T PF06609_consen 540 IAFGVVAIIAALFLGDID 557 (599)
T ss_pred HHHHHHHHHHHHHcCChH
Confidence 999999999888875433
No 121
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.99 E-value=7.5e-09 Score=111.42 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
.++++++.+++...-...+..-.+.+.+++|.++.+.+...+++.++.+++.+..|+++||+++| ..+.+.+.+
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r------~~~~~~~~~ 82 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR------RWIAGIMVL 82 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH------HHHHHHHHH
Confidence 34444444444333333333334556688999999999999999999999999999999999643 345555566
Q ss_pred HHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 427 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 427 ~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
.+++.++.. .++...+++.-++.|++.|+.++....+++|.|..|+.+...|+...+..+|.. +++++.+++.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~- 160 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMA-LGLILSGYILALDG- 160 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCC-
Confidence 666665544 355667888889999999998888888899999999999999999888888884 78888888875321
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
..+...+|.+|++.++.+++..++.
T Consensus 161 -----~~~~~gwr~~f~~~~~~~l~~~~~~ 185 (412)
T TIGR02332 161 -----LMALKGWQWLFLLEGFPSVILGVMT 185 (412)
T ss_pred -----CCCccchhHHHHHHHHHHHHHHHHH
Confidence 0011249999999887776554443
No 122
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.97 E-value=7e-09 Score=106.22 Aligned_cols=170 Identities=21% Similarity=0.304 Sum_probs=134.0
Q ss_pred HHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHH
Q 008597 349 WLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMS 428 (560)
Q Consensus 349 wll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~ 428 (560)
|.+....++............+.+.++.|.++.+.+...++..+.+.++.+.+|+++||+++|+ .+.+...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~------~~~~~~~~~~ 75 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR------VLLLGLLLFA 75 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch------hhHHHHHHHH
Confidence 4455555555444445556677888889999999999999999999999999999999996433 4445555666
Q ss_pred HHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCC
Q 008597 429 VGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGE 507 (560)
Q Consensus 429 ~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~ 507 (560)
++.++.. .++...+++..++.|++.|..++..+.++.|.+..|++++.+++......+|.. +++.+.+.+.|..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~--- 151 (352)
T cd06174 76 LGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGAL-LGPLLGGLLAESLG--- 151 (352)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHH-HHHHHHHHHHHHhh---
Confidence 6665443 345566777889999999999999999999999999999999999888888884 78888999998764
Q ss_pred CCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 508 GNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 508 ~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
++..|.+.+...+++.++...
T Consensus 152 ---------~~~~~~~~~~~~~~~~~~~~~ 172 (352)
T cd06174 152 ---------WRWLFLILAILGLLLALLLLF 172 (352)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHH
Confidence 888999988887777655443
No 123
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.97 E-value=9.6e-09 Score=108.21 Aligned_cols=168 Identities=13% Similarity=0.143 Sum_probs=126.6
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
+...++.+++......++....+++.+++|.++.+.+.+.++..+...++.+++|+++||+++| ..+.+...+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r------~~~~~~~~~~ 87 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR------LPMVTSIVLF 87 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHH
Confidence 3444444454444444555566788889999999999999999999999999999999999644 3344455555
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCC
Q 008597 428 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 506 (560)
Q Consensus 428 ~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~ 506 (560)
+++.++.. .++...+++..++.|++.|..+......+.|.+..++.+...|+...+..+|.. +++.+.+.+.+..+.
T Consensus 88 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~l~~~l~~~~~~- 165 (405)
T TIGR00891 88 SAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAV-VAAQVYSLVVPVWGD- 165 (405)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCc-
Confidence 55555443 345566777889999999999999999999999999999999999888888884 777788887775431
Q ss_pred CCCcccCccccHHHHHHHHHHHHHHH
Q 008597 507 EGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 507 ~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
.|+..|.+.+...++..
T Consensus 166 ---------~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 166 ---------GWRALFFISILPIIFAL 182 (405)
T ss_pred ---------cHHHHHHHHHHHHHHHH
Confidence 38888887655544443
No 124
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.95 E-value=4.8e-09 Score=113.61 Aligned_cols=177 Identities=16% Similarity=0.101 Sum_probs=123.4
Q ss_pred cChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 344 CTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 344 kt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
+.+.+|.+.+...+.......+.... +..++.|+++++.+...++..+...++.+.+|+++||+++|+ .+...
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~------~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAM-PYLVEQGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV------FLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhh-HHHHHcCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce------ehHHH
Confidence 55566666555444433222223333 444557999999999999999999999999999999997543 33334
Q ss_pred HHHHHHHHHHHhh-----cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhh
Q 008597 424 LATMSVGHIVVAS-----GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 498 (560)
Q Consensus 424 ~~l~~~~~lll~~-----~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~ 498 (560)
..+.+++.++... ++...+++..++.|++.|..++.....+.|.|..|+.++..|+...+..+|.. +++++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~-~~~~l~~~ 176 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGG-IPPLLVLL 176 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhH-HHHHHHHH
Confidence 4454555443321 12233455667889999998888888999999999999999999888777774 56666666
Q ss_pred hcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 499 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 499 iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
..+.+. -||.+|++.++++++..++..++.
T Consensus 177 ~~~~~~-----------~w~~~f~~~~~~~~i~~~~~~~~~ 206 (438)
T TIGR00712 177 GMAWFN-----------DWHAALYFPAICAIIVALFAFAMM 206 (438)
T ss_pred HHHHhh-----------hhHHHHHHHHHHHHHHHHHHHHhc
Confidence 555332 299999999988877665554443
No 125
>PRK03699 putative transporter; Provisional
Probab=98.95 E-value=7.4e-09 Score=110.41 Aligned_cols=172 Identities=11% Similarity=0.120 Sum_probs=130.5
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
+-+|..++.+++..+...+.-..++++.+++|+++++.+...++..+...+|.+++|+++||+++|+ .+.....
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~------~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR------QLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH------HHHHHHH
Confidence 4677777777666555555556788999999999999999999999999999999999999997543 3444555
Q ss_pred HHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 426 TMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 426 l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+.+++.++... +++..+++..++.|++.|..++.....+.|.+..|+.+...++......+|+. ++|.+.+.+.+.+.
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGM-IFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccc
Confidence 55565554443 44455677788999999998988899999999888899988887666667764 56677787766442
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
.||..|.+.++++++..++.
T Consensus 160 -----------gw~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK03699 160 -----------EWYWVYACIGLVYVAIFILT 179 (394)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHH
Confidence 29999998887776655443
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.95 E-value=6.7e-09 Score=111.61 Aligned_cols=177 Identities=12% Similarity=0.105 Sum_probs=114.0
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchH
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 418 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~ 418 (560)
.+.+|+|+||.+++.+++...+--.....++.+.++ +|+++.+.+..+++..+...++++.+|+++||+++|+ .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~-----~ 78 (420)
T PRK09528 4 MYYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKK-----H 78 (420)
T ss_pred chhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-----H
Confidence 346789999999988877776544556667766665 8999999999999999999999999999999997443 3
Q ss_pred HHHHHHHHHHHHH--H-HHhhc-C---c--chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHh
Q 008597 419 FIAITLATMSVGH--I-VVASG-F---P--GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 489 (560)
Q Consensus 419 ~l~~~~~l~~~~~--l-ll~~~-~---~--~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ 489 (560)
. .+.....++.. + ..... . . ....++.+..|.++..........+.+ + .++.+..||.......+|.
T Consensus 79 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~- 154 (420)
T PRK09528 79 L-LWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGW- 154 (420)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHH-
Confidence 2 22222222111 1 11110 0 0 011223344455555444445554433 3 2566778888766666676
Q ss_pred hhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 490 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 490 ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
.+++++.|.++|.. ++..|++.++++++..++.+.+
T Consensus 155 ~i~~~~~g~l~~~~-------------~~~~f~~~~~~~~~~~~~~~~~ 190 (420)
T PRK09528 155 ALCAFIAGILFNIN-------------PQINFWLGSGSALILLVLLFFA 190 (420)
T ss_pred HHHHHHHHHHHhcC-------------chHhHHHHHHHHHHHHHHHhcc
Confidence 46778889998852 6788988887777666554433
No 127
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.94 E-value=1.2e-08 Score=108.20 Aligned_cols=174 Identities=13% Similarity=0.101 Sum_probs=127.8
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcch-----hHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAI-----NSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~a-----a~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
+++++.+++..++......++...++.+.+++|.+..+. +...++..+...++.+++|+++||+++| ..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~ 86 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRK------IM 86 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcH------HH
Confidence 346777777776655444455667888999999886553 5677899999999999999999998643 33
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhh
Q 008597 420 IAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 498 (560)
Q Consensus 420 l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~ 498 (560)
+.....+.+++.+++. .++...+++..++.|++.+ ........+.+.+..++.+...|+...+..+|. ++++.+.|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~ 164 (408)
T PRK09874 87 LLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGA-LLGPLAGGL 164 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 4444555555554443 3445567777788888754 456666778899998999999999988888887 478888999
Q ss_pred hcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 499 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 499 iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
+.|..+ ++.+|.+.+++.+++.++..+.
T Consensus 165 l~~~~~------------~~~~~~~~~~~~~~~~~~~~~~ 192 (408)
T PRK09874 165 LADSYG------------LRPVFFITASVLFLCFLVTLFC 192 (408)
T ss_pred HHHHhC------------HHHHHHHHHHHHHHHHHHHHHH
Confidence 988765 8999999988877776555443
No 128
>TIGR00895 2A0115 benzoate transport.
Probab=98.94 E-value=6.6e-09 Score=108.84 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=119.8
Q ss_pred hhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 008597 365 TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLY 443 (560)
Q Consensus 365 ~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~ 443 (560)
.....+.+.+++|.++.+.+.+.++..+...++.+++|+++||+++| ..+.+...+.+++.++.. .++...++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (398)
T TIGR00895 36 MGFAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK------RVLLWSILLFSVFTLLCALATNVTQLL 109 (398)
T ss_pred HHhhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH------HHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 34456777888999988889999999999999999999999999643 334444455555554443 34445677
Q ss_pred HHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHH
Q 008597 444 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 523 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i 523 (560)
+..++.|++.|..++..++++.|.+..++.+...|+...+..+|.. +++.+.|.+.|..+ |+..|.+
T Consensus 110 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~g------------~~~~~~~ 176 (398)
T TIGR00895 110 ILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAA-VGGFLAGWLIPVFG------------WRSLFYV 176 (398)
T ss_pred HHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHH-HHHHHHHHHhhccc------------ceeehhh
Confidence 7888999999999999999999999999999999999888888884 78888889988765 7888888
Q ss_pred HHHHHHHHHHHHH
Q 008597 524 MASVAFVGCLVAF 536 (560)
Q Consensus 524 ~~~l~~la~vl~l 536 (560)
.++++++..++..
T Consensus 177 ~~~~~~~~~~~~~ 189 (398)
T TIGR00895 177 GGIAPLLLLLLLM 189 (398)
T ss_pred hhhHHHHHHHHHH
Confidence 8766655554433
No 129
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.94 E-value=7.1e-09 Score=112.79 Aligned_cols=167 Identities=16% Similarity=0.206 Sum_probs=130.7
Q ss_pred HHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Q 008597 353 VAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI 432 (560)
Q Consensus 353 ~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l 432 (560)
...++......+....++.+.+++|.++.+.++..+.+.+.+.++.+++|+++||+++| ..+.+...+..++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~ 82 (485)
T TIGR00711 9 LGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR------RLFLISTFAFTLGSL 82 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH------HHHHHHHHHHHHHHH
Confidence 33333333333444567888999999988999999999999999999999999999643 344455556666665
Q ss_pred HHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcc
Q 008597 433 VVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSC 511 (560)
Q Consensus 433 ll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C 511 (560)
+.. .++...+.+.-++.|++.|...+....++.|.+..++.+...++...+..+|+. +++.+.|++.|+.+
T Consensus 83 ~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~-~g~~~~~~l~~~~~------- 154 (485)
T TIGR00711 83 LCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPA-LGPTLGGWIIENYH------- 154 (485)
T ss_pred HHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhh-hhhccHhHhccCcC-------
Confidence 544 345566777889999999999999999999999999999999999888888884 78889999998765
Q ss_pred cCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 512 NGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 512 ~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
|+..|++.+.+++++.++..+.
T Consensus 155 -----w~~~f~~~~~~~~~~~~~~~~~ 176 (485)
T TIGR00711 155 -----WRWIFLINVPIGIIVVVVAFFI 176 (485)
T ss_pred -----ceehhhhhhHHHHHHHHHHHHH
Confidence 8899999888877776655444
No 130
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.93 E-value=1.5e-08 Score=107.64 Aligned_cols=169 Identities=15% Similarity=0.180 Sum_probs=127.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
.|++....++......++...++++.+++|.++.+.+...+.+.+...++.+.+|+++||+++| ..+.+...+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr------~~~~~~~~~~ 83 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR------PVILVGMSIF 83 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh------HHHHHHHHHH
Confidence 3444444455554445556678899999999999999999999999999999999999999643 3444445555
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCC
Q 008597 428 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 506 (560)
Q Consensus 428 ~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~ 506 (560)
+++.++.. .++...+.+..++.|++.|........+..|.+..++.+.+.++..++..++. .++|.+.|.+.|..+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~g-- 160 (394)
T PRK11652 84 ILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSP-LLAPLIGGLLTTLFG-- 160 (394)
T ss_pred HHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccC--
Confidence 55554433 34445677778888998888777777888899988899999999888888887 478888888888665
Q ss_pred CCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 507 EGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 507 ~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
|+.+|.+.+++.++..++.
T Consensus 161 ----------~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 161 ----------WRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred ----------hHHHHHHHHHHHHHHHHHH
Confidence 9999999877665554433
No 131
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.92 E-value=5.6e-09 Score=109.74 Aligned_cols=156 Identities=11% Similarity=0.188 Sum_probs=126.0
Q ss_pred hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 008597 364 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 442 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l 442 (560)
++...++++.+++|.++.+.+.+.++..+...++++.+|+++||+++ +..+.....+.+++.++.. .++...+
T Consensus 9 ~~~p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~------~~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGR------KPVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCC------hHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 55678889999999999999999999999999999999999999863 3344455555555555443 3445567
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHH
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 522 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~ 522 (560)
++..++.|++.+........++.|.+..++.++..++...+..+|.. +++.+.+.+.|..+ |+..|.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~------------~~~~~~ 149 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPL-LAPIIGGWLLVWFS------------WHAIFW 149 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcC------------hHHHHH
Confidence 77788999999999999999999999999999999999888888874 78888899998765 899999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 523 IMASVAFVGCLVAFLL 538 (560)
Q Consensus 523 i~~~l~~la~vl~l~l 538 (560)
+.+.++++..++..+.
T Consensus 150 ~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 150 VLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9888877766554433
No 132
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.91 E-value=4.1e-09 Score=109.49 Aligned_cols=156 Identities=20% Similarity=0.213 Sum_probs=118.7
Q ss_pred hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 008597 364 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 442 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l 442 (560)
.+..-.+.+.+++|.++.+.+.+.++..+...++.+.+|+++||+++| ..+.+...+.+++.++.. .++...+
T Consensus 13 ~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR------VFLPIGLILCAIVNLFFGFSTSLWVM 86 (379)
T ss_pred hhhhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe------ehhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 334455677788899999999999999999999999999999999644 344455555556555443 3445567
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhh-hhhhhcccccCCCCCcccCccccHHHH
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR-IIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~-l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
++..++.|++.|..++...++++|.+..++.+...++...+..+|.. ++++ +.+.+.+..+ ++..|
T Consensus 87 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~------------~~~~~ 153 (379)
T TIGR00881 87 AALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGG-LLPPLVLFGIAELYS------------WHWVF 153 (379)
T ss_pred HHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHH-HHHHHHHHHHHhcCC------------chhHH
Confidence 77888899999999999999999999999999999999888888875 5663 4445545433 88889
Q ss_pred HHHHHHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLVAFLL 538 (560)
Q Consensus 522 ~i~~~l~~la~vl~l~l 538 (560)
.+.++++++..++.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~ 170 (379)
T TIGR00881 154 IVPGIIAIIVSLICFLL 170 (379)
T ss_pred HHHHHHHHHHHHHHhee
Confidence 88887776655544433
No 133
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.90 E-value=1.4e-08 Score=108.00 Aligned_cols=149 Identities=15% Similarity=0.156 Sum_probs=115.9
Q ss_pred cHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHH
Q 008597 368 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGS 446 (560)
Q Consensus 368 ~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~ 446 (560)
-.+++.+++|.++++.+.+.+...+...++.+.+|+++||+++|+ .+.+...+..++.++.. .++...+.+..
T Consensus 37 ~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (406)
T PRK11551 37 AAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKR------ILIVSVALFGLFSLATAQAWDFPSLLVAR 110 (406)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch------hHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 346788899999999999999999999999999999999996443 33444444445444333 34555677788
Q ss_pred HHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHH
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~ 526 (560)
++.|++.|...+....++.|.+..|+.++..|+...+..+|.. +++.+.+.+.+..+ |+..|++.++
T Consensus 111 ~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------~~~~~~~~~~ 177 (406)
T PRK11551 111 LLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGA-LASVIGVLAAGDAA------------WRHIFYVGGV 177 (406)
T ss_pred HHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHccccC------------HHHHHHHHHH
Confidence 8999999999999999999999999999999999888888885 67777777766554 8999998876
Q ss_pred HHHHHHHHH
Q 008597 527 VAFVGCLVA 535 (560)
Q Consensus 527 l~~la~vl~ 535 (560)
+.++.+++.
T Consensus 178 ~~~~~~~~~ 186 (406)
T PRK11551 178 GPLLLVPLL 186 (406)
T ss_pred HHHHHHHHH
Confidence 655554433
No 134
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.90 E-value=9.4e-09 Score=109.94 Aligned_cols=168 Identities=12% Similarity=0.054 Sum_probs=129.2
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
+++||.++++.++......++...++++.++++.++.+.++.++.+.+...+..+++|+++||++||+ .+....
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~------vl~~~~ 75 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR------VMFIAN 75 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCch------hhHHHH
Confidence 57899999998887765555667777888899988888889999999999999999999999997543 344444
Q ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 425 ATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 425 ~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
.+.+++.++...... .++.-++.|++.|...+..-+++.|+++.|++++..|++.....+|. +++|.+.|.++|..
T Consensus 76 ~~~~~~~~~~~~~~~--~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~-~~Gp~lgG~l~~~~- 151 (393)
T PRK11195 76 GIKLLGCLLMLFGIH--PLLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAI-LLGTVLGGALADPH- 151 (393)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-
Confidence 444444443222111 24555788999999999999999999999999999999988877777 58999999999842
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
++..+.+.+.+.+++.+.
T Consensus 152 ------------~~~~~~i~~~~~~~~~~~ 169 (393)
T PRK11195 152 ------------AEAALAVCALIYLLAALF 169 (393)
T ss_pred ------------HHHHHHHHHHHHHHHHHH
Confidence 777777776665555443
No 135
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.89 E-value=2.2e-08 Score=106.93 Aligned_cols=172 Identities=9% Similarity=0.016 Sum_probs=127.4
Q ss_pred hhHHHHHHHHHHhhh----hhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHH
Q 008597 346 LNFWLLFVAMLCGMG----SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 421 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g----~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~ 421 (560)
+++|++.+...+... ..-++...++++.+++|.++.+.+..++.+.+...++.+..|.++||+++| ..+.
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r------~~l~ 82 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR------PVML 82 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHH
Confidence 566666555544443 334455567888899999998889999999999999999999999999643 3344
Q ss_pred HHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhc
Q 008597 422 ITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY 500 (560)
Q Consensus 422 ~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iy 500 (560)
+...+.+++.++.. .++...+++..++.|++.+......+..+.|.|..++.+...++......++. .++|.+.+.+.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~ 161 (406)
T PRK15402 83 AGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAP-LLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 44445555554433 34455677778888999998888888899999998888887787766556665 47778888888
Q ss_pred ccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 501 DNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 501 D~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
|..+ |+.+|++.+++++++.+...
T Consensus 162 ~~~~------------w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 162 HVLP------------WRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HccC------------ccHHHHHHHHHHHHHHHHHH
Confidence 8654 89999998888877765433
No 136
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.89 E-value=1.8e-08 Score=108.61 Aligned_cols=157 Identities=13% Similarity=0.060 Sum_probs=121.9
Q ss_pred hhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCc
Q 008597 361 SGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFP 439 (560)
Q Consensus 361 ~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~ 439 (560)
+..++...++++.+++|.+..+....++++.+..+++.+.+|+++||++|| ..+.....+.+++.++.. .++.
T Consensus 31 ~~~~~~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr------~~l~~~~~~~~~~~~~~~~a~~~ 104 (413)
T PRK15403 31 TTDLIQPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR------PVLITGALIFTLACAATLFTTSM 104 (413)
T ss_pred HHHhhccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch------HHHHHHHHHHHHHHHHHHHcCCH
Confidence 344566678889999999999999999999999999999999999999643 344445555556655444 3455
Q ss_pred chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHH
Q 008597 440 GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFML 519 (560)
Q Consensus 440 ~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~ 519 (560)
..+++.-++.|++.|.........+.|.|..++.+...++...+..+|+. ++|.+.+.+.|..+ |+.
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~lg~~l~~~~g------------w~~ 171 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPI-IGPLSGAALMHFVH------------WKV 171 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcC------------HHH
Confidence 56777788889887765666677889999999999999998888888874 78777778877654 999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 008597 520 SFLIMASVAFVGCLVAF 536 (560)
Q Consensus 520 ~f~i~~~l~~la~vl~l 536 (560)
.|++.+++.+++.++..
T Consensus 172 ~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 172 LFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999888777765433
No 137
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.89 E-value=1.3e-07 Score=100.95 Aligned_cols=169 Identities=18% Similarity=0.109 Sum_probs=111.0
Q ss_pred hhcHHHHHHHcCCCCcchhH--------HHHHHHHhhhh-hccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh
Q 008597 366 VNNISQIGESLGYPTSAINS--------LVSLWSIWNFL-GRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS 436 (560)
Q Consensus 366 i~~~~~i~~~lG~~~~~aa~--------lvSl~si~n~~-GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~ 436 (560)
.-+.+.|.+++|..+.+... .-.++..++.+ |-.+..+++|+++ |.++....++++.+.++.++.
T Consensus 324 nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG------Rk~iq~~GF~~~~i~~~~~~~ 397 (538)
T KOG0252|consen 324 NLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG------RKYIQLMGFFIMTIFFFVIAG 397 (538)
T ss_pred ccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh------hHHHHHhhHHHHHHHHHHHcC
Confidence 34678888988876554332 22355566665 8889999999985 556777777777777766542
Q ss_pred --cCc---chHHH-HHHHHHh-hhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCC
Q 008597 437 --GFP---GNLYV-GSIIVGV-CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGN 509 (560)
Q Consensus 437 --~~~---~~l~~-~~~l~G~-~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~ 509 (560)
+.+ ..+.+ .++..=+ .+|..-. .-.+-+|.|..+-+|+.||+.....=.|++ .+...+++..|++ +.
T Consensus 398 ~y~~~~~~~Gf~v~y~l~~ff~NFGPn~t-tfivpaE~FParvR~t~hGIsAA~GK~GAi-vg~~~F~~~t~~~--yp-- 471 (538)
T KOG0252|consen 398 PYNQLENTIGFVVLYSLTFFFGNFGPNAT-TFIVPAEIFPARVRSTCHGISAASGKAGAI-VGAFGFLYLTDHN--YP-- 471 (538)
T ss_pred CcccccccCceeehHHHHHHHHhcCCCce-eEEeehhhchHHHhhhhhhHHHHhccchHH-HHHHHhhHhhhcc--CC--
Confidence 211 12222 2222222 3443322 223357999999999999999877777775 5655566666632 00
Q ss_pred cccCccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q 008597 510 SCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVV 550 (560)
Q Consensus 510 ~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~ 550 (560)
-..-++.+|++.++++.++.+.++++- .++++..+++
T Consensus 472 ---~~~g~~~v~~i~~~~~~~gi~~T~l~p-Etk~~~leei 508 (538)
T KOG0252|consen 472 ---PNIGVRNVFIILAGCMLLGILFTLLIP-ETKGKSLEEI 508 (538)
T ss_pred ---ccccchHHHHHHHHHHHHhHheeEEee-cccccCHHHh
Confidence 012389999999999999999888777 7777777665
No 138
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.89 E-value=1.8e-08 Score=111.11 Aligned_cols=167 Identities=10% Similarity=0.043 Sum_probs=128.0
Q ss_pred HHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH
Q 008597 353 VAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI 432 (560)
Q Consensus 353 ~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l 432 (560)
+..++...-...+..-+|++.+++|.+.++.++.++.+.+..+.+-+.+|+++||+++| ..+.+...+..++.+
T Consensus 13 ~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk------~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 13 LVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK------RLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHHH
Confidence 33333333333344457899999999988999999999999999999999999999643 445555666666665
Q ss_pred HHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhc-cCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCc
Q 008597 433 VVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNS 510 (560)
Q Consensus 433 ll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~F-G~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~ 510 (560)
+.. .++...++++-++.|++.|...+....++.+.| ..|+.+...|+......+|+ .++|.+.|.+.|..+
T Consensus 87 ~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~-~~gp~lgg~l~~~~g------ 159 (495)
T PRK14995 87 AAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGA-AFGPLVGGILLEHFY------ 159 (495)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC------
Confidence 554 355566777888999999887766666666776 67899999999988888888 589999999999765
Q ss_pred ccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 511 CNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 511 C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
||+.|++...++++.+++..+.
T Consensus 160 ------wr~~f~i~~~~~~~~~~l~~~~ 181 (495)
T PRK14995 160 ------WGSVFLINVPIVLVVMGLTARY 181 (495)
T ss_pred ------hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988877776655444
No 139
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.89 E-value=8.5e-07 Score=98.39 Aligned_cols=390 Identities=15% Similarity=0.091 Sum_probs=230.4
Q ss_pred hhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHH
Q 008597 48 STLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCL 126 (560)
Q Consensus 48 ~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~ 126 (560)
++.+++....++|+.+ .+++|.+.|++| +|.+++++.+++.+|+++...+. .++.+..
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~G--------------Rk~~l~~~~~~~~iG~ii~~~a~-------~~~~l~~ 147 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIG--------------RKKTLLLAVVLFLIGAIIIALAP-------SWYQLIV 147 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------------hHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHH
Confidence 3457899999999987 778999999987 89999999999999999964442 3545555
Q ss_pred HHHHhhcccchhhhhhHHHHhhhccC-CCcceeeehhhhhhhhHHHHHHHHHHhcCCC--chhHHHHHHHHhHHHHHhhh
Q 008597 127 FMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKGR--PSTYLLILALLPTFASLLFM 203 (560)
Q Consensus 127 ~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~--~~~fll~la~~~~~v~~~~~ 203 (560)
==++.|.|.|.....+-.-...-=|+ .||..+.+...... .+..+..+.+.+.+.+ ..++.+.++..|.++-.+++
T Consensus 148 GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~-~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~ 226 (513)
T KOG0254|consen 148 GRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFIT-IGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGM 226 (513)
T ss_pred HHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHH-HHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHH
Confidence 55888899888876655555555465 79999999888888 5555556666666554 57788888888888877775
Q ss_pred eeeeecCCCCCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHhhcccccccccccccccCCCCC
Q 008597 204 SLVRIHGTNSADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLLFLLSSPLGIAIKAQREDTTRLSPT 283 (560)
Q Consensus 204 ~~ir~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~p~~~~~~~~~~~~~~~~~~ 283 (560)
+++. .. ++ +++ ..-......+.+ . .. +..+ +
T Consensus 227 ~~~p---es-----p~-------------~L~------~~g~~~~a~~~l-----~--~l-----------~g~~--~-- 257 (513)
T KOG0254|consen 227 LFLP---ES-----PR-------------WLI------EKGRLEEAKRSL-----K--RL-----------RGLS--P-- 257 (513)
T ss_pred HhCC---CC-----hH-------------HHH------HcCChHHHHHHH-----H--HH-----------hCCC--C--
Confidence 5542 11 11 111 000000000000 0 00 0000 0
Q ss_pred cccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcHH----HHhcChhHHHHHHHHHHhh
Q 008597 284 FATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNIL----QSVCTLNFWLLFVAMLCGM 359 (560)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~----~~lkt~~Fwll~~~~~~~~ 359 (560)
++.+. +..+.. .+. ..+ .+.. ..+.... ...+++.++.+.+..+...
T Consensus 258 ---------~~~~~----~~~~~~--~~~---~~~-------~~~~----~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~ 308 (513)
T KOG0254|consen 258 ---------EDVEV----ELELLK--IKL---LVE-------AEVA----EGKASWGELFSPKVRKRLIIGLLLQLFQQL 308 (513)
T ss_pred ---------cchHH----HHHHHH--HHH---HHh-------hhcc----cccccHHHhcCcchHHHHHHHHHHHHHHHH
Confidence 00000 000000 000 000 0000 0000112 2234445555555555555
Q ss_pred hhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---
Q 008597 360 GSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS--- 436 (560)
Q Consensus 360 g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~--- 436 (560)
..-..+++..+++.+..|.+... .....+.++.|.++-++..++-||++ |+..+......+.++++++..
T Consensus 309 tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~g------Rr~lll~s~~~m~~~~~~~~~~~~ 381 (513)
T KOG0254|consen 309 TGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFG------RRKLLLFGAAGMSICLVILAVVGV 381 (513)
T ss_pred hCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhc------cHHHHHHhHHHHHHHHHHHHHHHH
Confidence 33345667888999998887554 45556888899999999999999994 445566666666666654331
Q ss_pred --cC----c---chHH-HHHHHHHhhhhccccchhh-HHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC
Q 008597 437 --GF----P---GNLY-VGSIIVGVCYGCQWSLMPT-ITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS 505 (560)
Q Consensus 437 --~~----~---~~l~-~~~~l~G~~~G~~~~l~p~-i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~ 505 (560)
.. . ..+. +...+.-.++...++-.|- +.+|.|-.+-.++..++......+..++. ...+.....
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-----~~~~~~~~~ 456 (513)
T KOG0254|consen 382 FALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-----SFFFPFITE 456 (513)
T ss_pred HhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-----HHHHHHHHH
Confidence 11 1 1122 2233333355556666665 67999999999999999877676666543 222221110
Q ss_pred CCCCcccCccccHHHHHHHHHHHHHHHH-HHHHHHhhhhhhhHHHHHHhhcCC
Q 008597 506 GEGNSCNGTHCFMLSFLIMASVAFVGCL-VAFLLFIRTRRFYKQVVLRRLGHS 557 (560)
Q Consensus 506 ~~~~~C~G~~cy~~~f~i~~~l~~la~v-l~l~l~~r~r~~~~~~~~~~~~~~ 557 (560)
... ....|...++.+.++.+ ........+|.+..++++++.++.
T Consensus 457 ------~~~--~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~~~ 501 (513)
T KOG0254|consen 457 ------ALG--IGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFEEG 501 (513)
T ss_pred ------hcc--ccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHHcC
Confidence 000 23456666666666665 455556678888888887766554
No 140
>PRK11043 putative transporter; Provisional
Probab=98.87 E-value=2.3e-08 Score=106.50 Aligned_cols=157 Identities=13% Similarity=0.142 Sum_probs=120.0
Q ss_pred hhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcc
Q 008597 362 GLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPG 440 (560)
Q Consensus 362 gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~ 440 (560)
.-++...++++.+++|.++.+.+...++..+...++.+.+|+++||+++| ..+.....+.+++.++... ++..
T Consensus 22 ~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~~~~~~~~~~~~~~~~~ 95 (401)
T PRK11043 22 TDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK------PVLLAGLSLFALGSLGMLWVESAA 95 (401)
T ss_pred HHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc------HHHHHHHHHHHHHHHHHHHhcCHH
Confidence 33445566778889999999999999999999999999999999999643 3344444555555554432 3445
Q ss_pred hHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHH
Q 008597 441 NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLS 520 (560)
Q Consensus 441 ~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~ 520 (560)
.+.+..++.|++.+........++.|.+..++.+..++.......++. .+++.+.|.+.|..+ |+..
T Consensus 96 ~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~i~~~l~~~~g------------~~~~ 162 (401)
T PRK11043 96 QLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSP-ALAPLLGAWLLNHFG------------WQAI 162 (401)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCC------------hHHH
Confidence 566677888888888777788889999998888888888876666666 367788899988765 9999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 008597 521 FLIMASVAFVGCLVAFL 537 (560)
Q Consensus 521 f~i~~~l~~la~vl~l~ 537 (560)
|.+.+++.++..++...
T Consensus 163 ~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 163 FATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988887776655443
No 141
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.87 E-value=1.6e-08 Score=107.43 Aligned_cols=158 Identities=11% Similarity=0.142 Sum_probs=123.5
Q ss_pred hhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcch
Q 008597 363 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGN 441 (560)
Q Consensus 363 l~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~ 441 (560)
.++..-+|++.+++|.++.+.+...+++.+...++.+..|+++||+++| ..+.....+..++.++.. .++...
T Consensus 20 ~~~~~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r------~~l~~~~~~~~i~~~~~~~~~~~~~ 93 (392)
T PRK10473 20 DMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK------PVAIPGAALFIIASLLCSLAETSSL 93 (392)
T ss_pred HHHhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh------HHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 3555678899999999998899999999999999999999999999643 344445555555555443 334455
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHH
Q 008597 442 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 442 l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
+++..++.|++.|..+.....++.|.+..|+.++..++......+++ .++|.+.+.+.|..+ |+..|
T Consensus 94 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~-~~~~~i~~~l~~~~g------------~~~~~ 160 (392)
T PRK10473 94 FLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIP-VLAPVLGHLIMLKFP------------WQSLF 160 (392)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCcC------------hHHHH
Confidence 66677888999998888899999999999999999999887777777 467778888777654 99999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 522 ~i~~~l~~la~vl~l~l~ 539 (560)
++.++++++..++..+..
T Consensus 161 ~~~~~~~~i~~~~~~~~~ 178 (392)
T PRK10473 161 YTMAAMGILVLLLSLFIL 178 (392)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999888777766654443
No 142
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.86 E-value=2.1e-08 Score=109.46 Aligned_cols=153 Identities=15% Similarity=0.133 Sum_probs=117.0
Q ss_pred hhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHH
Q 008597 366 VNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPGNLYV 444 (560)
Q Consensus 366 i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~~l~~ 444 (560)
....+++.+++|.+..+.+...+++.+...++.+++|+++||+++| ..+.+...+.+++.++... ++...+++
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCR------PVVIAGGLLASLGMILASFSSNVIELYL 112 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCch------HHHHhhHHHHHHHHHHHHHhhhHHHHHH
Confidence 3456788889999999999999999999999999999999999643 3444455555555554433 33444544
Q ss_pred H-HHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHH
Q 008597 445 G-SIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 523 (560)
Q Consensus 445 ~-~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i 523 (560)
. .++.|++.|..+.....++.+.|. |+.+.+.|+...+..+|.. +++++.|.+.|..+ ||.+|++
T Consensus 113 ~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~-~~~~l~~~l~~~~g------------wr~~f~~ 178 (455)
T TIGR00892 113 TAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLS-TLAPLNQYLFESFG------------WRGSFLI 178 (455)
T ss_pred HHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHH-HHHHHHHHHHHHhC------------hHHHHHH
Confidence 3 367799888776666778889995 8899999999998888884 77889999999775 9999999
Q ss_pred HHHHHHHHHHHHHHH
Q 008597 524 MASVAFVGCLVAFLL 538 (560)
Q Consensus 524 ~~~l~~la~vl~l~l 538 (560)
.+++++++.+..+++
T Consensus 179 ~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 179 LGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999887766544433
No 143
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.85 E-value=1.8e-08 Score=104.63 Aligned_cols=155 Identities=15% Similarity=0.144 Sum_probs=118.9
Q ss_pred hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchH
Q 008597 364 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNL 442 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l 442 (560)
......+++.+++|.++.+.+...+++.+...++.+.+|.++||+++|+ .+.+...+.+++.++.. .++...+
T Consensus 21 ~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~------~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (377)
T TIGR00890 21 TWTLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRA------VAMLGGILYGLGFTFYAIADSLAAL 94 (377)
T ss_pred hhhhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccc------hhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3344567888899999999999999999999999999999999997543 33444555556655443 3445567
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHH
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFL 522 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~ 522 (560)
++...+.|++.|..+......+.+.+. |+.+...++...+..+|.. +.+++.+.+.|..+ |+..|+
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------~~~~f~ 160 (377)
T TIGR00890 95 YLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSF-ILSPLITSVINLEG------------VPAAFI 160 (377)
T ss_pred HHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHh-HHHHHHHHHHhccc------------HHHHHH
Confidence 777778999999877777777888886 7899999999888888885 44567777777554 999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 523 IMASVAFVGCLVAFLL 538 (560)
Q Consensus 523 i~~~l~~la~vl~l~l 538 (560)
+.++++++.+++.+..
T Consensus 161 ~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 161 YMGIIFLLVIVLGAFL 176 (377)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9998887776655444
No 144
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.85 E-value=6.4e-07 Score=98.36 Aligned_cols=182 Identities=13% Similarity=0.077 Sum_probs=116.0
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHH-HHHc-CCCCc-c-----h----hHHHHHHHHhhhhhccccccchhhhhhhcC
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQI-GESL-GYPTS-A-----I----NSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 413 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~l-G~~~~-~-----a----a~lvSl~si~n~~GRl~~G~lsD~~~~~~~ 413 (560)
+.+|.+.+..++.+.+-+.+.....+. +++. +.++. + + .....++++.+. +++.+-+++.|+.+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~----i~s~~l~~l~~~~g 333 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLG----ITSIGMEKLCRGWG 333 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhc
Confidence 589999999988887766665555444 4443 32221 1 1 222334444444 55566666666554
Q ss_pred CCchHHHHHHHHHHHHHHHHHh-hcC---------------------cchHHHHHHHHHhhhhccccchhhHHHHhcc--
Q 008597 414 WERPSFIAITLATMSVGHIVVA-SGF---------------------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFG-- 469 (560)
Q Consensus 414 ~~R~~~l~~~~~l~~~~~lll~-~~~---------------------~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG-- 469 (560)
.|+....+..++.++++.... .+. .....+...++|+++....++.=+++++.-.
T Consensus 334 -~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 334 -AGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 223333445455555544322 111 1445667888999999999999999999888
Q ss_pred CCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008597 470 VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 543 (560)
Q Consensus 470 ~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r 543 (560)
.++.|..-|+.+++-.+.-+ +.....|.+.+..|+ .-..++.+.++..+++.++++++.-|.+
T Consensus 413 ~~~~G~~mgilN~~I~lpQi-i~sl~~g~~~~~~g~----------~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQI-IVSLGSGPWDQLFGG----------GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred CCCCcchhhHHHHHHHHHHH-HHHHHHHHHHHHcCC----------CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 46779999999886666654 444566776666553 1456888888888999988887766554
No 145
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.85 E-value=3.5e-08 Score=107.98 Aligned_cols=163 Identities=14% Similarity=0.143 Sum_probs=128.4
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
..++.+++.+++......+.....+++.+++|.++.+.+.+++.+.+...++.+..|+++||+++| ..+.+...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 93 (496)
T PRK03893 20 KAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR------LAMVISIV 93 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHH
Confidence 366677777766655555555567888889999999999999999999999999999999999643 34445555
Q ss_pred HHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 426 TMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 426 l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
+.+++.++.. .++...+++..++.|++.|..++....++.|.+..|+.+...++...+..+|.. +++.+.+.+.+..+
T Consensus 94 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~ 172 (496)
T PRK03893 94 LFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAV-VAAQVYSLVVPVWG 172 (496)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhccCC
Confidence 5555555443 334556777889999999999999999999999999999999999888888884 78888999988665
Q ss_pred CCCCCcccCccccHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASV 527 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l 527 (560)
|+..|.+....
T Consensus 173 ------------w~~~f~~~~~~ 183 (496)
T PRK03893 173 ------------WRALFFIGILP 183 (496)
T ss_pred ------------HHHHHHHHHHH
Confidence 88888875433
No 146
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.84 E-value=3.1e-08 Score=103.47 Aligned_cols=172 Identities=16% Similarity=0.192 Sum_probs=120.1
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHH-HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQ-IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~-i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
.||..++.+++......++....++ +.+++|.++.+.+.+.++..+...++.+.+|+++||+++| ..+.+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r------~~~~~~~~ 75 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR------YTTTLSLL 75 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch------HHHHHHHH
Confidence 5888888888877777776777775 7788999999999999999999999999999999999643 34455566
Q ss_pred HHHHHHHHHh-hc-CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHH----hhhhhHHhhhhhhhhhhh
Q 008597 426 TMSVGHIVVA-SG-FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA----IASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 426 l~~~~~lll~-~~-~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~----~a~~~g~~ll~~~l~G~i 499 (560)
+.+++.++.. .+ +...+++..++.|++.+ .+.....+++|.+..|+.+...++.. ++..+|+. +++++.+.+
T Consensus 76 ~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~-i~~~l~~~~ 153 (366)
T TIGR00886 76 LLAIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF-VMPPIIGSL 153 (366)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH-HHHHHHHHH
Confidence 6666665544 34 45567777888898855 45566778999999999999988875 44555553 444445544
Q ss_pred cccccCCCCCcccCccccHHHH-HHHHHHHHHHH
Q 008597 500 YDNVASGEGNSCNGTHCFMLSF-LIMASVAFVGC 532 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f-~i~~~l~~la~ 532 (560)
.+..++. +...++..| ++.+++..+..
T Consensus 154 ~~~~~~~------~~~~w~~~~~~~~~~~~~~~~ 181 (366)
T TIGR00886 154 IFGAGLP------AHLAWGWAFVIVPAGILLLPA 181 (366)
T ss_pred Hhccccc------ccccccchhHHHHHHHHHHHH
Confidence 3332110 112388888 44344443333
No 147
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.84 E-value=2.8e-07 Score=97.69 Aligned_cols=180 Identities=15% Similarity=0.206 Sum_probs=131.4
Q ss_pred CcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCC
Q 008597 337 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWE 415 (560)
Q Consensus 337 ~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~ 415 (560)
.|++|..+.++.-+..++.++..=.-.+++.-.+-++. ++|.+..+.-...-..++..++|-+++|++.||++.|
T Consensus 243 ~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k---- 318 (438)
T COG2270 243 STFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK---- 318 (438)
T ss_pred HHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc----
Confidence 46777776666555444443332112233444445555 6799988877777788999999999999999999744
Q ss_pred chHHHHHHHHHHHHHH-HHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhh
Q 008597 416 RPSFIAITLATMSVGH-IVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 494 (560)
Q Consensus 416 R~~~l~~~~~l~~~~~-lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~ 494 (560)
+..+ +.+++..+.. .......+..+++...++|...|+..+..-+..++..-.++-+.-||+-.+..-.+++ ++|.
T Consensus 319 -~vl~-~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~-~gp~ 395 (438)
T COG2270 319 -PVLM-IGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASF-LGPF 395 (438)
T ss_pred -eeeh-HHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHH-HHHH
Confidence 2333 2333333333 2332334556888899999999999999999999999999999999999998888885 8999
Q ss_pred hhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 495 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 495 l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
+.|.+-|.+|+ -|..+.....+.+++.++
T Consensus 396 lv~v~t~iTg~-----------~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 396 LVAVITQITGS-----------SRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred HHHHHHHHhcc-----------hhhHHHHHHHHHHhhHhh
Confidence 99999999886 777888877777777654
No 148
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.84 E-value=5.3e-08 Score=104.34 Aligned_cols=160 Identities=12% Similarity=0.058 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHH
Q 008597 348 FWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATM 427 (560)
Q Consensus 348 Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~ 427 (560)
+...++.+++....-.......+.+.+++|.++.+.+...++..+...++.+.+|+++||+++ +..+.+...+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~------r~~l~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGR------KPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC------hHHHHHHHHHH
Confidence 344444444433333344455677778899999999999999999999999999999999853 34555566666
Q ss_pred HHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCC
Q 008597 428 SVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 506 (560)
Q Consensus 428 ~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~ 506 (560)
+++.++.. .++...+++.-++.|++.|..+.....++.|.+..|+.+...|+...+..+|+. +++.+.+.+.|..+
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~-~~~~l~~~l~~~~~-- 170 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI-IAAYFMPSFAEAYG-- 170 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH-HHHHHHHHHcccCC--
Confidence 66665443 344566778889999999999999999999999999999999999888888885 67777788877654
Q ss_pred CCCcccCccccHHHHHHHHH
Q 008597 507 EGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 507 ~~~~C~G~~cy~~~f~i~~~ 526 (560)
|+..|.+...
T Consensus 171 ----------w~~~f~i~~~ 180 (426)
T PRK12307 171 ----------WRAAFFVGLL 180 (426)
T ss_pred ----------HHHHHHHHHH
Confidence 8999987543
No 149
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.84 E-value=1.6e-08 Score=108.50 Aligned_cols=177 Identities=15% Similarity=0.070 Sum_probs=129.4
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
+...|+++|+.+++..++......+....++.+.++++.++.+.+.+.+...+...++.++.|+++||+++|+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~------ 84 (417)
T PRK10489 11 SLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL------ 84 (417)
T ss_pred HHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE------
Confidence 44557999999888766665544444556677778888888888999999999999999999999999976542
Q ss_pred HHHHHHHHHHHHHHH-----h-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhh
Q 008597 420 IAITLATMSVGHIVV-----A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 493 (560)
Q Consensus 420 l~~~~~l~~~~~lll-----~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~ 493 (560)
+.....+.+++.++. . .++...+++..++.|++.|...+....++.|.+..++.++..++...+..+|. .+++
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~ 163 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGS-VISP 163 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHH-HhHH
Confidence 122222222222211 1 22334566677788888887777777788999998999999999887788887 4788
Q ss_pred hhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 494 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 494 ~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
.+.|.++|..+ ++..|.+.+++++++.++.
T Consensus 164 ~l~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~ 193 (417)
T PRK10489 164 ALGGLLIAAGG------------VAWNYGLAAAGTFITLLPL 193 (417)
T ss_pred HHHHHHHHHHh------------hHHHHHHHHHHHHHHHHHH
Confidence 89999998764 8889988877776665443
No 150
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.82 E-value=8.6e-08 Score=105.33 Aligned_cols=177 Identities=14% Similarity=0.113 Sum_probs=113.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
.+++.|+.+++..........-.+++.+++|.+..+.+...+.+.+...+|.+++|+++||+++| ..+....++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r------~~~~~~~~~ 110 (476)
T PLN00028 37 AFHLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR------YGSAFLLML 110 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh------HHHHHHHHH
Confidence 33344444444443333333445678889999988888888899999999999999999999643 344444555
Q ss_pred HHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHh----hhhhHHhhhhhhhhhhhcc
Q 008597 427 MSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI----ASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 427 ~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~----a~~~g~~ll~~~l~G~iyD 501 (560)
.+++.++.. .+++..+++.-++.|++.+... .....++|.|..|+.|...|+... +..+++.+ .+.+...+.+
T Consensus 111 ~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~-~~~i~~~~~~ 188 (476)
T PLN00028 111 TAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLL-MPLVFPLIKD 188 (476)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh
Confidence 555555443 3445556666778898887643 345568899999999999998753 44444432 2333333322
Q ss_pred cccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 502 NVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 502 ~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
.. |.+...||.+|++.++++++..++...+
T Consensus 189 ~~-------~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 189 AG-------APSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred cC-------CcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 20 0011239999999998887766555443
No 151
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.82 E-value=5.3e-08 Score=103.73 Aligned_cols=170 Identities=14% Similarity=0.131 Sum_probs=114.2
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
||+||.+....++...+--.+...++.+.+ ++|+++.+.+.++++..+...++++.+|+++||++||+ .. ...
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~-----~~-~~~ 74 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKK-----HL-LWI 74 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-----HH-HHH
Confidence 689999987776666554445556777665 57999999999999999999999999999999997543 22 222
Q ss_pred HHHHHHHH---HHHhhc------CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhh
Q 008597 424 LATMSVGH---IVVASG------FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 494 (560)
Q Consensus 424 ~~l~~~~~---lll~~~------~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~ 494 (560)
....+++. +.+... ....+.+..++.|++++...+.....+.|. .++.+.+||.......+|. .+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~g~-~~g~~ 151 (396)
T TIGR00882 75 ISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKV--SRNSNFEYGKARMFGCVGW-ALCAS 151 (396)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHh--hhhcccccchhhhhcccHH-HHHHH
Confidence 12111111 111111 111234446777888888887777777664 2444567777666566666 46777
Q ss_pred hhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 495 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 495 l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
+.|.++|. + ++..|.+.+.+.++.+++.+
T Consensus 152 ~~g~l~~~-~------------~~~~f~~~~~~~~~~~~~~~ 180 (396)
T TIGR00882 152 IAGILFSI-D------------PQIVFWLGSGFALILMLLLM 180 (396)
T ss_pred HHhhhhcc-C------------chHHHHHHHHHHHHHHHHHH
Confidence 88888774 2 88899998888777665443
No 152
>PRK12382 putative transporter; Provisional
Probab=98.81 E-value=4.8e-08 Score=103.68 Aligned_cols=166 Identities=13% Similarity=0.073 Sum_probs=119.0
Q ss_pred hcChhHHHHHHHHHHhhhhhhhhhhcHHHH-HHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHH
Q 008597 343 VCTLNFWLLFVAMLCGMGSGLATVNNISQI-GESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 421 (560)
Q Consensus 343 lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~ 421 (560)
..+..+|.++...++.....-+...-++.+ .+++|.++.+.+.+++...+...++.+.+|+++||+++|+ .+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~------~l~ 85 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR------SAL 85 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH------HHH
Confidence 456788888777666654433444555654 5688999999999999999999999999999999997443 333
Q ss_pred HHHHHHHHHHH---HHh------hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhh
Q 008597 422 ITLATMSVGHI---VVA------SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 492 (560)
Q Consensus 422 ~~~~l~~~~~l---ll~------~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~ 492 (560)
+......++.+ +.. ..+...+++..++.|++.+...+.....+.|.+..|++++..|+...+...|. .++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~-~~g 164 (392)
T PRK12382 86 QGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGAL-AAG 164 (392)
T ss_pred HHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHH-HHH
Confidence 33333333221 111 11234566778899999998777777888999999999999999988777776 478
Q ss_pred hhhhhhhcccccCCCCCcccCccccHHHHHHHHHH
Q 008597 493 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASV 527 (560)
Q Consensus 493 ~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l 527 (560)
+++.+.+++..+ |+..+.+...+
T Consensus 165 ~~~~~~l~~~~g------------~~~~~~~~~~~ 187 (392)
T PRK12382 165 APLGLLLHSHFG------------FAALALTTMVL 187 (392)
T ss_pred HHHHHHHHhccC------------hHHHHHHHHHH
Confidence 888888888654 77665554433
No 153
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.80 E-value=8.5e-08 Score=102.85 Aligned_cols=171 Identities=13% Similarity=0.131 Sum_probs=128.1
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHH-HHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQI-GESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
-++ |+++...++......++..-++.. .+++|.++.+.+...++..+...+.++++|.++||+++ +..+...
T Consensus 10 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~------k~~l~~~ 82 (400)
T PRK11646 10 LGK-YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGA------KPMIVTG 82 (400)
T ss_pred ccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCc------hHHHHHH
Confidence 344 555555555544445555566655 46789999999999999999999999999999999964 3445556
Q ss_pred HHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccc
Q 008597 424 LATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 502 (560)
Q Consensus 424 ~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~ 502 (560)
..+.+++.+... .+++..+++..++.|++.|...+...+++.|.+..++.++.+|+......+|. .++|.+.|.+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~-~ig~~l~g~l~~- 160 (400)
T PRK11646 83 MLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGA-VIGALLGSWLLQ- 160 (400)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-
Confidence 666666665544 34455677778888998887777778889999999999999999988888887 478888998883
Q ss_pred ccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 503 VASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 503 ~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
.+ |+..|.+.+..++++.++..
T Consensus 161 ~g------------~~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 161 YD------------FRLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred hh------------HHHHHHHHHHHHHHHHHHHH
Confidence 33 89999998877776655443
No 154
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.79 E-value=9.5e-08 Score=105.28 Aligned_cols=170 Identities=19% Similarity=0.251 Sum_probs=123.8
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhh-hhhcCCCchHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIV-LHRMGWERPSFIAIT 423 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~-~~~~~~~R~~~l~~~ 423 (560)
+.+|.++..-+....+-.++...++.+.+ .+|+++.+++...+.+.+...++.++.|+++||+ ++| ..+.+.
T Consensus 9 ~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr------r~iliG 82 (493)
T PRK15462 9 RAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR------MAVMLG 82 (493)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH------HHHHHH
Confidence 45677666666555555555667777754 5799999999999999999999999999999998 543 344556
Q ss_pred HHHHHHHHHHHhhc--CcchHHHHHHHHHhhhhccccchhhHHHHhccCC--chhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 424 LATMSVGHIVVASG--FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG--HMGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 424 ~~l~~~~~lll~~~--~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k--~~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
..++.++++++... .+..+++...+++++.|...+..+++++|.|..+ ...+.+++...+..+|+. ++|.+.|++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~-iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSI-IAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHH-HHHHHHHHH
Confidence 66667776555432 2233555556667788888888889999999875 467777777766667774 788889999
Q ss_pred cccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 500 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
.+..| |+..|.++++..+++.+.
T Consensus 162 ~~~~G------------w~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 162 QEEYS------------WAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred HhhhC------------hHHHHHHHHHHHHHHHHH
Confidence 88765 999999977665555543
No 155
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.78 E-value=1.2e-07 Score=104.84 Aligned_cols=168 Identities=13% Similarity=0.192 Sum_probs=126.2
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhh-hhhhcCCCchHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDI-VLHRMGWERPSFIAIT 423 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~-~~~~~~~~R~~~l~~~ 423 (560)
+.+|+++..-++--++...+...+..+. +++|.+++++.+.++.+.....+.-+++|+++|| +++| ..+.+.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r------~~~~~g 87 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK------RTIVLG 87 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH------HHHHHH
Confidence 4677777766666555555555666554 5689998888889999998888888999999999 7543 455566
Q ss_pred HHHHHHHHHHHhhc-C-cchHHHHHHHHHhhhhccccchhhHHHHhccCCc--hhhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 424 LATMSVGHIVVASG-F-PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH--MGTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 424 ~~l~~~~~lll~~~-~-~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~--~g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
..+..++.+++... + +..++++-++.|++.|...+..+++++|.|..++ .+..|++..++..+|+. +++.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~-~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSL-ISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHH-HHHHHHHHH
Confidence 66667776654432 2 2335567788899999999999999999998663 47788888888888884 788889999
Q ss_pred cccccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 500 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
.|..| |+..|++.++..+++.
T Consensus 167 ~~~~g------------w~~~F~i~~i~~~~~~ 187 (489)
T PRK10207 167 ADKFG------------YSVTYNLCGAGLIIAL 187 (489)
T ss_pred HHhhC------------hHHHHHHHHHHHHHHH
Confidence 88764 9999999765444433
No 156
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.78 E-value=1.1e-08 Score=109.22 Aligned_cols=104 Identities=14% Similarity=0.061 Sum_probs=87.2
Q ss_pred cHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 008597 36 SSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVG 114 (560)
Q Consensus 36 s~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~ 114 (560)
-+.+++.+|++.++.-.+++..++.-.+ +++.|.+.||+- ++.++.+|..+..+..++ .+
T Consensus 56 ~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryN--------------R~~v~~vG~~iW~~Av~~-----~~ 116 (493)
T KOG1330|consen 56 LKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYN--------------RKRVIAVGIFIWTLAVFA-----SG 116 (493)
T ss_pred hHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcC--------------cceEEeeHHHHHHHHHHH-----HH
Confidence 3678889999999999999888888765 899999999985 677888888888887777 55
Q ss_pred cCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC-CCcceeee
Q 008597 115 LIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD-YGGTIVGI 160 (560)
Q Consensus 115 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~-~RG~a~Gi 160 (560)
.+. .+|++.+.=.+.|.|-....+.+-.-...+||+ +|+.+.|+
T Consensus 117 fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~i 161 (493)
T KOG1330|consen 117 FSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGI 161 (493)
T ss_pred HHH--HHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHH
Confidence 543 378888888999999999999999999999995 79876665
No 157
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.78 E-value=5.2e-08 Score=104.29 Aligned_cols=150 Identities=17% Similarity=0.228 Sum_probs=109.9
Q ss_pred hhcHHHHHHHcCCC--------CcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-h
Q 008597 366 VNNISQIGESLGYP--------TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-S 436 (560)
Q Consensus 366 i~~~~~i~~~lG~~--------~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~ 436 (560)
....+.+..+.+.+ ..+.+.+.+++.+...++.+.+|+++||+++| ..+.+...+..++.++.. .
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr------~~~~~~~~~~~~~~~~~~~~ 121 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRK------KSLLIIALLFVIGAILMGLA 121 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhH------HHHHHHHHHHHHHHHHHHHh
Confidence 33455566665555 67788999999999999999999999999643 334445555555554432 1
Q ss_pred cCc---chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhh---hhhcccccCCCCCc
Q 008597 437 GFP---GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII---GYIYDNVASGEGNS 510 (560)
Q Consensus 437 ~~~---~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~---G~iyD~~g~~~~~~ 510 (560)
... ..+++.-++.|++.|..+.....+++|.+..|+.+...++...+..+|.. +++.+. +...+..
T Consensus 122 ~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~------- 193 (481)
T TIGR00879 122 AFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGIL-VAYGFGSGKVSLNNTL------- 193 (481)
T ss_pred ccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHH-HHHHHHHHhhcCCCCc-------
Confidence 222 25777889999999999999999999999999999999999888888884 666655 3433333
Q ss_pred ccCccccHHHHHHHHHHHHHHHHH
Q 008597 511 CNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 511 C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
.||..|.+.+...++..+.
T Consensus 194 -----~w~~~f~~~~~~~~~~~~~ 212 (481)
T TIGR00879 194 -----GWRIPLGLQLIPAGLLFLG 212 (481)
T ss_pred -----cHHHHHHHHHHHHHHHHHH
Confidence 3999999966655555433
No 158
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.78 E-value=5.5e-08 Score=104.09 Aligned_cols=151 Identities=15% Similarity=0.096 Sum_probs=107.7
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
..|.....+.+..+.+ +..+.++++.+++|.++.+.+..++.+.+...++.+++|.++||+++| ..+.....+
T Consensus 15 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k------~~l~~~~~~ 87 (402)
T TIGR00897 15 LLWGYIGVVVFMTGDG-LEQGWLSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL------KTMMIGLLL 87 (402)
T ss_pred hhHHHHHHHHHHHhhh-hHHHhHHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH------HHHHHHHHH
Confidence 3333333333333333 445667888899999999999999999999999999999999999643 334444444
Q ss_pred HHHHHHHH---hh--cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 427 MSVGHIVV---AS--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 427 ~~~~~lll---~~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
.+++.++. .. .+...+++..++.|++.+.........+.+.+..|+.++..|+...+..+|..++++.+.|.+.|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~ 167 (402)
T TIGR00897 88 WCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP 167 (402)
T ss_pred HHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45544322 11 23344556667778888876666666778889999999999999888777754477888889888
Q ss_pred ccc
Q 008597 502 NVA 504 (560)
Q Consensus 502 ~~g 504 (560)
..|
T Consensus 168 ~~g 170 (402)
T TIGR00897 168 AFG 170 (402)
T ss_pred ccc
Confidence 765
No 159
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.76 E-value=4.3e-08 Score=103.78 Aligned_cols=178 Identities=16% Similarity=0.136 Sum_probs=141.8
Q ss_pred HhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHH
Q 008597 342 SVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 421 (560)
Q Consensus 342 ~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~ 421 (560)
-.|-..|+.+|+.+..-....--...-.|++.++.|++.++.+.+.|.++|.=.+++.++|.+|||.+. | .++.
T Consensus 25 ~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~np-----r-~fm~ 98 (448)
T COG2271 25 RWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNP-----R-YFMA 98 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC-----c-eeeh
Confidence 345556666777776666666555556688889999999999999999999999999999999999863 3 3566
Q ss_pred HHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhh--hh
Q 008597 422 ITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRII--GY 498 (560)
Q Consensus 422 ~~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~--G~ 498 (560)
+.+++.++..+++.. ++...+.+.-++.|+.-|..|+-.-..+...|..|.+|+.+++-+++.-+|+- +.+++. |.
T Consensus 99 ~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGa-l~~~~~~la~ 177 (448)
T COG2271 99 FGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGA-LAPLVALLAF 177 (448)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccc-hHHHHHHHHH
Confidence 677777777776654 33345666678899999999999999999999999999999999999999996 556677 88
Q ss_pred hcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 499 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 499 iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
+.++.+ ++.+|++-++++++-.++.+++
T Consensus 178 ~~~~~~------------w~~~f~~pgiiaiival~~~~~ 205 (448)
T COG2271 178 FAFHGG------------WRAAFYFPGIIAIIVALILLFL 205 (448)
T ss_pred HHhccc------------hhHHHHHHHHHHHHHHHHHHHH
Confidence 888764 9999999999887666544443
No 160
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.74 E-value=1.6e-07 Score=100.29 Aligned_cols=168 Identities=17% Similarity=0.164 Sum_probs=126.2
Q ss_pred hhHHHHHHHHHHhhhhhhh---hhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLA---TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI 422 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~---~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~ 422 (560)
|.-|++....+++...... ...-+|++.+++|.++.+.+..+|++.++..++-+..|+++||+++ +..+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~------r~~l~~ 79 (393)
T PRK09705 6 PLNFMLLVLVLIGLNMRPLLTSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSE------RRSVAI 79 (393)
T ss_pred chHHHHHHHHHHHHHcchhhhccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCc------hHHHHH
Confidence 3446666666555544322 2234577888999999999999999999999999999999999964 345666
Q ss_pred HHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 423 TLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 423 ~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
...+.+++.++.. .+++..+++.-++.|++.|......+.++.+.|. ++.+...|+...+...|+. +++.+.+.+.+
T Consensus 80 ~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~-~g~~~~~~l~~ 157 (393)
T PRK09705 80 SLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGG-LGAAITPWLVQ 157 (393)
T ss_pred HHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 7777777777655 4556678888999999999999999999999996 8889999998776666663 56667777777
Q ss_pred cccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 502 NVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 502 ~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
+..+ |+..+.+.+...++..
T Consensus 158 ~~~~-----------w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 158 HSET-----------WYQTLAWWALPAVVAL 177 (393)
T ss_pred hcCC-----------HHHHHHHHHHHHHHHH
Confidence 6432 7888777665554443
No 161
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.73 E-value=1.1e-07 Score=103.88 Aligned_cols=154 Identities=12% Similarity=0.047 Sum_probs=112.7
Q ss_pred cHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh------hcCcch
Q 008597 368 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA------SGFPGN 441 (560)
Q Consensus 368 ~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~------~~~~~~ 441 (560)
-.+++.+++|.++.+.+.+.+.+.+..+++.+.+|+++||+++|+ .+.+..++.+++.++.. .++...
T Consensus 51 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (467)
T PRK09556 51 AQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ------FLPFLLILSAICMLGFGASLGSGSVSLGL 124 (467)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc------hHHHHHHHHHHHHHHHHHHHhcccchHHH
Confidence 367888999999999999999999999999999999999996443 33333334333333221 234456
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHH
Q 008597 442 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 442 l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
+.+.-++.|++.|..++....+++|.|..++.|...|+...+..+|+. +++.+...+.+..-. +.++..|
T Consensus 125 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~-l~~~i~~~~~~~~~~---------~~~~~~f 194 (467)
T PRK09556 125 MIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGA-GAGGVALWGANYFFD---------GHVIGMF 194 (467)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhh-HHHHHHHHHHHhhcc---------CcchhHH
Confidence 677778899999999999999999999999999999999888888884 566666555543210 1367788
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLVAFL 537 (560)
Q Consensus 522 ~i~~~l~~la~vl~l~ 537 (560)
.+.+.+.++..++.+.
T Consensus 195 ~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 195 IFPSIIALIIGFIGLR 210 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8877766655444433
No 162
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.73 E-value=2.7e-07 Score=100.82 Aligned_cols=186 Identities=12% Similarity=0.114 Sum_probs=122.4
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
.+.+|+-++.++++...=.+.---.+++.+ ++|+++++.+.++++..+..+++|+..|++.||++ +|++.. +.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G-----~R~v~~-~~ 106 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFG-----GRRWTV-FS 106 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----ChHHHH-HH
Confidence 357888888776665433332233445555 78999999999999999999999999999999997 444443 34
Q ss_pred HHHHHHHHHHHhh------cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH----HhhhhhHHhhhhh
Q 008597 424 LATMSVGHIVVAS------GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI----AIASPVGSYVCSV 493 (560)
Q Consensus 424 ~~l~~~~~lll~~------~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~----~~a~~~g~~ll~~ 493 (560)
..+.++..++... +++..+++..++.|++ |+.++.....+++.|..|+.|...|+. .++..++.+ +.|
T Consensus 107 ~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~-l~p 184 (462)
T PRK15034 107 TAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQL-VAP 184 (462)
T ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHH-HHH
Confidence 4444555444332 3556788888999998 888888999999999999999999998 344444443 334
Q ss_pred hhhh-hhcccccCCCCCccc-CccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 494 RIIG-YIYDNVASGEGNSCN-GTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 494 ~l~G-~iyD~~g~~~~~~C~-G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
++.+ .+++..|......=. +..-.+.++++...+.+++.++..+.
T Consensus 185 ~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 185 LVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3332 233333221100000 12346777777777777666555544
No 163
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.72 E-value=1.3e-06 Score=90.97 Aligned_cols=403 Identities=14% Similarity=0.110 Sum_probs=218.9
Q ss_pred CcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHH-HHHHH
Q 008597 27 GATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAI-LCFAG 104 (560)
Q Consensus 27 G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~-~~~~G 104 (560)
+-.-.=|..++.+.+.-|.+..|.+.++..-+.|..+ ....|...|++| .|+...+-.. .+..|
T Consensus 92 m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~g--------------rr~~f~~T~l~t~v~~ 157 (528)
T KOG0253|consen 92 MEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIG--------------RRKGFNLTFLVTGVFG 157 (528)
T ss_pred HHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhh--------------cchhhhhhHHHHHHHH
Confidence 3333446778999999999999999999999999988 567899999987 4443322111 11222
Q ss_pred HHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhc-cC-CCcceeeehhhhhhhhHHHHHHHHHHhcCC
Q 008597 105 YFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNF-GD-YGGTIVGIMKGFLGLGGAALIQAYDTIWKG 182 (560)
Q Consensus 105 ~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~F-p~-~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~ 182 (560)
++ ++. ++.+..+|++-.+.|.|.|- .....+.---| |. +|++-+=+. +....|..+-..+.-..-..
T Consensus 158 ~i------s~~--spnf~~L~~f~~l~~~g~gg--~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~ 226 (528)
T KOG0253|consen 158 VI------SGA--SPNFASLCVFRALWGFGVGG--LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN 226 (528)
T ss_pred Hh------hcC--CCCeehhhHHHHHHhccCCC--ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh
Confidence 22 343 34455677777777888776 33333333333 64 677665544 88888888887776655555
Q ss_pred CchhHHHHHHHHhHHHHHhhheeeeecCCC---CCccccchhhhhHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH
Q 008597 183 RPSTYLLILALLPTFASLLFMSLVRIHGTN---SADDKKHLNAFSAVALTIAAYLMIIIILENIFTFPLWARIITFLFLL 259 (560)
Q Consensus 183 ~~~~fll~la~~~~~v~~~~~~~ir~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (560)
-...+++|+..+|........+-+-.-|-. .+++++.+... -+++
T Consensus 227 ~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL--------------------------~kiA------ 274 (528)
T KOG0253|consen 227 FGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETL--------------------------HKIA------ 274 (528)
T ss_pred hhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHH--------------------------HHHH------
Confidence 578899999988876644433222111100 02222111000 0000
Q ss_pred HHhhcccccccccccccccCCCCCcccCCCCCCCCCCCCcCCccCCCCCcccccCCCCCccccccccccccccccccCcH
Q 008597 260 FLLSSPLGIAIKAQREDTTRLSPTFATQRSPLVDCPETTTSTKFSASQDSVAYHELPGEESQVKAEFDDKKLKDEEDMNI 339 (560)
Q Consensus 260 ~ll~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~ 339 (560)
+.++...... .......++.|+ ||. +.+ +..+...++ +..+ ...-.++
T Consensus 275 --------------rmNg~qlplg--vl~~s~~~~~e~---e~~--~~~--~~~~~a~ke-------~rg~--~~nLlsp 322 (528)
T KOG0253|consen 275 --------------RMNGKQLPLG--VLESSAIDRQEQ---EES--DLD--DSKSSAAKE-------VRGG--TTNLLSP 322 (528)
T ss_pred --------------HhcCCCCCcc--eeeeehhhhhhh---hhh--chh--hhhhccccc-------cccc--hHhhcCh
Confidence 0000000000 000000000000 000 000 000000000 0000 0001344
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCC---------------CcchhHH--HHHHHHhhhhhccccc
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYP---------------TSAINSL--VSLWSIWNFLGRFGGG 402 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~---------------~~~aa~l--vSl~si~n~~GRl~~G 402 (560)
+=.-+|...|.+|++..+........+..+-+...+.+.. ......+ +=+.+.+.+.|-++.|
T Consensus 323 ~lrkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~ 402 (528)
T KOG0253|consen 323 KLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITG 402 (528)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHH
Confidence 5566777888888887766554444444444443322211 1111111 2367788999999999
Q ss_pred cchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc----chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhh
Q 008597 403 YVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFP----GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIF 477 (560)
Q Consensus 403 ~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~----~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~y 477 (560)
++-||++|| -+++..+++.++..+++.. ..+ ..++.+.+.+-.+|+..+.- +.|+|..+-.++.-
T Consensus 403 ~iverlGRK------kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvY----tPEVyPTavRatgv 472 (528)
T KOG0253|consen 403 VIVERLGRK------KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVY----TPEVYPTAVRATGV 472 (528)
T ss_pred HHHHHhcch------hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEe----cCcccchhhhhcch
Confidence 999999655 4566666666666554432 111 23444555555566665544 45889999999999
Q ss_pred hHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008597 478 NTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFIRTR 543 (560)
Q Consensus 478 G~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~r~r 543 (560)
|......=+|++ +.|.++ ...+.+ -..+..+-+++++++.++...+-+.+|
T Consensus 473 GtcSsmaRIggI-~~p~iA-~~~e~s-------------~sl~i~vy~~~~ilagIavcffPiEtk 523 (528)
T KOG0253|consen 473 GTCSSMARIGGI-FSPVIA-MRAELS-------------TSLPIFVYGALFILAGIAVCFFPIETK 523 (528)
T ss_pred hhhhhHHhhhhh-hhhHHH-HHhccc-------------eeehHHHHHHHHHHHHHHheeeeeccC
Confidence 999877888884 777666 333322 224455567777777777666655444
No 164
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.72 E-value=2.5e-07 Score=100.73 Aligned_cols=152 Identities=18% Similarity=0.153 Sum_probs=107.4
Q ss_pred HHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-----cCcchHH
Q 008597 369 ISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-----GFPGNLY 443 (560)
Q Consensus 369 ~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-----~~~~~l~ 443 (560)
++.+.++ |.++.+.+..++...+..+++.+++|+++||+++| ..+.+...+.+++.++... ++...++
T Consensus 52 ~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k------~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 124 (452)
T PRK11273 52 MPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR------VFLPAGLILAAAVMLFMGFVPWATSSIAVMF 124 (452)
T ss_pred hHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc------hhHHHHHHHHHHHHHHHHhhhcccccHHHHH
Confidence 4555555 99999999999999999999999999999999644 3444454555555544332 1233455
Q ss_pred HHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHH
Q 008597 444 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 523 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i 523 (560)
+..++.|++.|..++.....+.|.|..|+.+...|+...+..+|..+.++.+...+....+ |+..|++
T Consensus 125 ~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g------------w~~~f~i 192 (452)
T PRK11273 125 VLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFND------------WHAALYM 192 (452)
T ss_pred HHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcc------------HHHHHHH
Confidence 5667889999888877778889999999999999998887777764344432222222222 8999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 524 MASVAFVGCLVAFLLF 539 (560)
Q Consensus 524 ~~~l~~la~vl~l~l~ 539 (560)
.++++++..++.++..
T Consensus 193 ~~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 193 PAFAAILVALFAFAMM 208 (452)
T ss_pred HHHHHHHHHHHHHHHc
Confidence 8887777655554443
No 165
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.67 E-value=1.5e-07 Score=100.09 Aligned_cols=153 Identities=13% Similarity=0.085 Sum_probs=115.0
Q ss_pred hhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHH
Q 008597 365 TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPGNLY 443 (560)
Q Consensus 365 ~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~~l~ 443 (560)
+..-++++.+++|.++.+.+.+.+.+.+...++.+..|+++||++|| ..+...+.....+.+.... ++...+.
T Consensus 10 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr------~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (368)
T TIGR00903 10 FSPVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR------WFLFGSLATFAAAAGRLLDPFNYEWLL 83 (368)
T ss_pred HHhhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch------HHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 34567888899999999999999999999999999999999999643 2333333333233222222 3455677
Q ss_pred HHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHH
Q 008597 444 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 523 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i 523 (560)
+.-++.|++.|...... ...+|.|..|+.+...++...+..+|.. +++.+.+.+.+..| +|..|++
T Consensus 84 ~~R~l~G~g~~~~~~~~-~~~~~~~~~~~r~~a~~~~~~~~~lG~~-l~~~~~~~l~~~~g------------Wr~~f~~ 149 (368)
T TIGR00903 84 ACQLLAALGQPFLLNAF-APAASQIREERRDLVISLLSFAMYLGII-FALAAGLKIYTAGG------------LQLLIIP 149 (368)
T ss_pred HHHHHHHhHhHHHHHHH-HHHHHHcCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHccc------------hHHHHHH
Confidence 78888899988654334 4458999999999999999999999995 77888888877665 9999999
Q ss_pred HHHHHHHHHHHHHH
Q 008597 524 MASVAFVGCLVAFL 537 (560)
Q Consensus 524 ~~~l~~la~vl~l~ 537 (560)
.++++++..++..+
T Consensus 150 ~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 150 IAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHHHHHH
Confidence 88887777655443
No 166
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.67 E-value=3.7e-06 Score=93.24 Aligned_cols=141 Identities=16% Similarity=0.077 Sum_probs=100.0
Q ss_pred cccccHHHH-hhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHH
Q 008597 32 FGIYSSTLK-SSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMW 109 (560)
Q Consensus 32 fs~ys~~l~-~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~ 109 (560)
-+.|+...+ +.+..+....+.......+|..+ +++.|.+.|++| +|.+++++.++..++-++
T Consensus 101 ~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~G--------------Rk~~~~~~~~~~~i~~~~-- 164 (521)
T KOG0255|consen 101 SSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFG--------------RKPVLLVSLLLFIIFGIL-- 164 (521)
T ss_pred CCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcc--------------cHHHHHHHHHHHHHHHHH--
Confidence 344555544 55666666666677777788877 567889999876 899999998888877766
Q ss_pred HHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhc-cCCCcceeeehhhhhhhhHHHHHHHHHHhcCCCchhHH
Q 008597 110 ASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNF-GDYGGTIVGIMKGFLGLGGAALIQAYDTIWKGRPSTYL 188 (560)
Q Consensus 110 l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~F-p~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~~~~fl 188 (560)
.... ++++.++.+=++.|.+.+..++.+....+.++ |++|+.+..+ ...+-.++.+...+...+.+ |-+.+.
T Consensus 165 ---~a~a--~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-~Wr~~~ 237 (521)
T KOG0255|consen 165 ---TAFA--PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-DWRWLF 237 (521)
T ss_pred ---HHHh--CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-hHHHHH
Confidence 4443 34888999999999999999999999999999 5789998888 55555555555444444433 444444
Q ss_pred HHHHHHh
Q 008597 189 LILALLP 195 (560)
Q Consensus 189 l~la~~~ 195 (560)
+..++..
T Consensus 238 ~~~~~~~ 244 (521)
T KOG0255|consen 238 WIISIPS 244 (521)
T ss_pred HHHHHHH
Confidence 4444333
No 167
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.64 E-value=3.8e-07 Score=96.99 Aligned_cols=167 Identities=13% Similarity=0.097 Sum_probs=117.2
Q ss_pred hhHHHHHHHHHHhhhhhhhhhhcHHH-HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 346 LNFWLLFVAMLCGMGSGLATVNNISQ-IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 346 ~~Fwll~~~~~~~~g~gl~~i~~~~~-i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
++|..+.+..+......-+...-++. +.+++|.++.+.+...++..+...++.+.+|+++||+++|+ .+....
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~------~l~~~~ 88 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKK------AVVFGL 88 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcc------hHHHHH
Confidence 45555555554444333344455665 45678999999999999999999999999999999997543 333444
Q ss_pred HHHHHHHHHH---h-hc-----CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhh
Q 008597 425 ATMSVGHIVV---A-SG-----FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRI 495 (560)
Q Consensus 425 ~l~~~~~lll---~-~~-----~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l 495 (560)
.+.+++.+.. . .+ +...+++..++.|++.|.........+.|.+..|++++..++...+..+|. ++++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~-~~g~~l 167 (399)
T PRK05122 89 CGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGAL-AIGAPL 167 (399)
T ss_pred HHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHH-HHHHHH
Confidence 4433332221 1 11 122456677899999999888888888999999999999998877666666 478888
Q ss_pred hhhhcccccCCCCCcccCccccHHHHHHHHHHHHHH
Q 008597 496 IGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVG 531 (560)
Q Consensus 496 ~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la 531 (560)
.+.+.+..+ ++..+.+...++++.
T Consensus 168 ~~~l~~~~g------------~~~~~~~~~~~~~~~ 191 (399)
T PRK05122 168 GVLLYHWGG------------LAGLGLLIMLLALLG 191 (399)
T ss_pred HHHHHHccc------------HHHHHHHHHHHHHHH
Confidence 888888654 787777766554433
No 168
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.64 E-value=2.8e-07 Score=97.76 Aligned_cols=152 Identities=12% Similarity=0.063 Sum_probs=117.2
Q ss_pred cChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHH
Q 008597 344 CTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAIT 423 (560)
Q Consensus 344 kt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~ 423 (560)
.++++|+++...++.......+...+|++.+++|.++.+++..++...+.+.++.+.+|+++||+++|+ .+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~------~~~~~ 77 (381)
T PRK03633 4 YTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR------SYYLA 77 (381)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH------HHHHH
Confidence 356789988888776555444556788999999999999999999999999999999999999997543 33444
Q ss_pred HHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccc
Q 008597 424 LATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN 502 (560)
Q Consensus 424 ~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~ 502 (560)
..+.+++.+... .++...+.+..++.|++.|..++.....+.+..-.++.+...|....+..+|. .+++.+.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~l~~~ 156 (381)
T PRK03633 78 SLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGT-VLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhccccc
Confidence 455555554433 34556677788899999998877766677788888899999999877777777 4777778887764
No 169
>PTZ00207 hypothetical protein; Provisional
Probab=98.63 E-value=4.3e-07 Score=101.93 Aligned_cols=170 Identities=12% Similarity=0.156 Sum_probs=120.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcH--HHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNI--SQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~--~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
+++++..+.++...+|.++..++ +++.+++|++..+.+++.++.. .-....+..|+++||++ |+..+.+..
T Consensus 26 Rw~~lva~~~~~~~~g~~y~fsv~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G------~R~vllig~ 98 (591)
T PTZ00207 26 RFALLVLGAFCSICTSFMYAFNLISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLG------PRPIFVLSM 98 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC------cHHHHHHHH
Confidence 45566666655555566555444 7788889999888877766533 33456667899999995 345566677
Q ss_pred HHHHHHHHHHhhc-------CcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhh
Q 008597 425 ATMSVGHIVVASG-------FPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 497 (560)
Q Consensus 425 ~l~~~~~lll~~~-------~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G 497 (560)
++.+++.++.+.. +...+++.-++.|++-|..+......+.+.|. ++.|...|+...+..+|+.++++...+
T Consensus 99 ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~ 177 (591)
T PTZ00207 99 TVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLA 177 (591)
T ss_pred HHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777665432 34456777788898888887788888999995 888999999999999999766665555
Q ss_pred hhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 498 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 498 ~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
.+.|. ++..|++.+++.++..++++.+
T Consensus 178 l~~~~--------------~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 178 FFSDN--------------TSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHh--------------HHHHHHHHHHHHHHHHHHHHhh
Confidence 54331 6677888887777766555554
No 170
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.60 E-value=1.1e-07 Score=103.66 Aligned_cols=145 Identities=14% Similarity=0.190 Sum_probs=113.9
Q ss_pred HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--h-cCcchHHHHHHHHHh
Q 008597 375 SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA--S-GFPGNLYVGSIIVGV 451 (560)
Q Consensus 375 ~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~--~-~~~~~l~~~~~l~G~ 451 (560)
+++.++.+.+.+.+.+.+...++.+..|+++||+++|+ .+.+...+.+++.++.. . .....+++.-++.|+
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~ 143 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKW------SIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGL 143 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcch------hhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHH
Confidence 45677777888999999999999999999999996443 34444444455544332 1 233456777889999
Q ss_pred hhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc-cCCCCCcccCccccHHHHHHHHHHHHH
Q 008597 452 CYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV-ASGEGNSCNGTHCFMLSFLIMASVAFV 530 (560)
Q Consensus 452 ~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~-g~~~~~~C~G~~cy~~~f~i~~~l~~l 530 (560)
+.|..++..+.+++|.|..|+.+...|+...+..+|.. +++++.+.+.|.. + |+.+|++.+++.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~-i~~~l~~~l~~~~~g------------w~~~f~i~~~~~~~ 210 (465)
T TIGR00894 144 AQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTF-IFLPISGWLCESWGG------------WPMIFYVFGIVGCA 210 (465)
T ss_pred hcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCC------------CCeehhhhhHHHHH
Confidence 99999999999999999999999999999998888885 7888999999874 4 89999999887766
Q ss_pred HHHHHHHH
Q 008597 531 GCLVAFLL 538 (560)
Q Consensus 531 a~vl~l~l 538 (560)
..++...+
T Consensus 211 ~~~~~~~~ 218 (465)
T TIGR00894 211 WSLLWFVF 218 (465)
T ss_pred HHHHHHHH
Confidence 65554443
No 171
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.57 E-value=5e-07 Score=101.16 Aligned_cols=175 Identities=18% Similarity=0.171 Sum_probs=126.4
Q ss_pred cChhHHHHHHHHHHhhhhh---hhh-hhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 344 CTLNFWLLFVAMLCGMGSG---LAT-VNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 344 kt~~Fwll~~~~~~~~g~g---l~~-i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
++++|+..+..+.+...+. +.. -+-+++|.+++|-+ +..+++.+...+.++++-.+.|.+||.+ +|++.
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf------GRr~~ 110 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF------GRRYF 110 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh------cchHH
Confidence 6678887776554443222 111 23357888999876 4557788889999999999999999999 56678
Q ss_pred HHHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhh
Q 008597 420 IAITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGY 498 (560)
Q Consensus 420 l~~~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~ 498 (560)
+.+..++..+|..+.+. ++...+..+.++.|++.|.... ....++|+.-.|++...+.+......+.. ..++.++..
T Consensus 111 ~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~-~~~~~ia~~ 188 (599)
T PF06609_consen 111 FIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITT-WISPLIAQL 188 (599)
T ss_pred HHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhh-cccHHHHHH
Confidence 88888888888887663 4456788889999999988774 56668999999999877776655443333 245555545
Q ss_pred hcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 499 IYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 499 iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
+..+ + .||+.|++.++...+++++..+..
T Consensus 189 ~~~~-~-----------~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 189 FAAH-S-----------GWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred hccC-C-----------CcchHHHHHHHHHHHHHHHHHHHh
Confidence 5433 2 399999999999888887655443
No 172
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.56 E-value=5.7e-07 Score=94.16 Aligned_cols=147 Identities=15% Similarity=0.128 Sum_probs=111.4
Q ss_pred hcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Q 008597 367 NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGS 446 (560)
Q Consensus 367 ~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~ 446 (560)
.-++++.+++|.++.+.+...++..+...++.+..|+++||+++|+ .+.+...+.+++.+....+++..+++..
T Consensus 21 ~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 94 (355)
T TIGR00896 21 PLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEER------SVAAGLLLIAAGILIRSAPGTALLFAGT 94 (355)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH------HHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3567888999999999999999999999999999999999997543 3334444444444433334455677778
Q ss_pred HHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHH
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~ 526 (560)
++.|++.|......+.++.|.+. ++.+...|+...+..+|.. +++.+.+.+.|..+. -|+..|.+.++
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-i~~~~~~~l~~~~~~----------~w~~~f~~~~~ 162 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAA-LAAAATVPLAQHSGG----------HWQQALAWWAL 162 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHH-HHHHHHHHHHHhhhh----------hHHHHHHHHHH
Confidence 88999999888889999999985 7899999998887777774 676777777765421 28888887776
Q ss_pred HHHHH
Q 008597 527 VAFVG 531 (560)
Q Consensus 527 l~~la 531 (560)
+++++
T Consensus 163 ~~~~~ 167 (355)
T TIGR00896 163 PALLA 167 (355)
T ss_pred HHHHH
Confidence 55444
No 173
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.56 E-value=1.7e-07 Score=82.81 Aligned_cols=131 Identities=11% Similarity=0.168 Sum_probs=100.4
Q ss_pred HHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHH
Q 008597 387 VSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITY 465 (560)
Q Consensus 387 vSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~ 465 (560)
.+..++.+.++.+..|++.||+++| ..+.....+..++.++.. .++...+.+..++.|++.+...+.....+.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRK------PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchh------HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 3456788889999999999998643 334444444455544433 234455667788999999999999999999
Q ss_pred HhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 466 EIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 466 e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
|.+..++.++.+++......+|.. +++.+.|.+.|..+ |+..|.+.+..++++.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 135 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPL-LGPPLGGVLAQFLG------------WRAPFLFLAILALAAFILLA 135 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHH-HhHHhHHHHhcccc------------hHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999888888884 78888999988654 88899988887777665544
No 174
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.53 E-value=9.2e-07 Score=92.49 Aligned_cols=154 Identities=12% Similarity=0.001 Sum_probs=104.6
Q ss_pred hhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHH
Q 008597 366 VNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLY 443 (560)
Q Consensus 366 i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~ 443 (560)
...++.+. +++|.++.+.+.+.++..+...+..+.+|.++||+++|+ ..+.....+..++.++.. .+++..++
T Consensus 17 ~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~ 91 (375)
T TIGR00899 17 FPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRK-----GLILFCCLLAALACLLFAWNRNYFLLL 91 (375)
T ss_pred hhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch-----HHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 34455544 578999999999999999999999999999999997432 333333333344433333 33444555
Q ss_pred HHHHHHHhhhhccccchhhHHHHhccCCchhh--hhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHH
Q 008597 444 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT--IFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~--~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
+..++.|...+...+....+..|....+..+. .++....+..+|. .+++++.|.+.|..+ |+..|
T Consensus 92 ~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~ig~~~~~~l~~~~~------------~~~~f 158 (375)
T TIGR00899 92 VLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAW-VIGPPLAFWLALGFG------------FTVMF 158 (375)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHH-HHhhhHHHHHHHhcc------------cHHHH
Confidence 55666677666666555566677776554442 2577666666776 477888899988765 99999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLVAFL 537 (560)
Q Consensus 522 ~i~~~l~~la~vl~l~ 537 (560)
++.+.++++..++...
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 159 LTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9998877766655444
No 175
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.52 E-value=6.9e-07 Score=97.27 Aligned_cols=148 Identities=18% Similarity=0.094 Sum_probs=102.8
Q ss_pred CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh----------cC---cchHH
Q 008597 377 GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS----------GF---PGNLY 443 (560)
Q Consensus 377 G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~----------~~---~~~l~ 443 (560)
+.++.+.+..++++.++..+|-+++|+++||++|| ..+.+...+.+++.++... .+ ...++
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr------~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRR------DSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFV 124 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHH
Confidence 67777888999999999999999999999999644 3444444555555443221 11 12456
Q ss_pred HHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHH
Q 008597 444 VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLI 523 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i 523 (560)
++-++.|++.|+.++..+++++|.+..|+.+...|+...+..+|.. +++.+.+.+.+..... .. +...||..|++
T Consensus 125 ~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~---~~-~~~gWr~~f~~ 199 (479)
T PRK10077 125 IYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQL-VVYFVNYFIARSGDAS---WL-NTDGWRYMFAS 199 (479)
T ss_pred HHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHH-HHHHHHHHHhccCccc---cc-ccCChHHHHHH
Confidence 6778999999999999999999999999999999999887777774 4443333222111000 00 11249999998
Q ss_pred HHHHHHHHHHHH
Q 008597 524 MASVAFVGCLVA 535 (560)
Q Consensus 524 ~~~l~~la~vl~ 535 (560)
.++..++..+..
T Consensus 200 ~~~~~~~~~~~~ 211 (479)
T PRK10077 200 EAIPALLFLMLL 211 (479)
T ss_pred HHHHHHHHHHHH
Confidence 877766655443
No 176
>TIGR00898 2A0119 cation transport protein.
Probab=98.49 E-value=2.3e-07 Score=101.92 Aligned_cols=146 Identities=18% Similarity=0.179 Sum_probs=113.3
Q ss_pred HHHHHHHcCCC---CcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHH
Q 008597 369 ISQIGESLGYP---TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYV 444 (560)
Q Consensus 369 ~~~i~~~lG~~---~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~ 444 (560)
.+.+.++.+.+ +.+.+...+++.++..+|.+++|+++||++|| ..+.+...+.+++.++.. .++...+++
T Consensus 112 ~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr------~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 185 (505)
T TIGR00898 112 SSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRK------KVLLLSTLVTAVSGVLTAFSPNYTVFLV 185 (505)
T ss_pred cccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccch------HHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 45666777887 67788899999999999999999999998643 344455555555555443 345566777
Q ss_pred HHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHH
Q 008597 445 GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIM 524 (560)
Q Consensus 445 ~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~ 524 (560)
.-++.|++.|+.+.....+++|.++.|+.+...++...+..+|.. +++.+++.+.| ||..|++.
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~-~~~~~~~~~~~---------------wr~~~~~~ 249 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLV-LLPLVAYFIPD---------------WRWLQLAV 249 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHH-HHHHHHHHhhH---------------HHHHHHHH
Confidence 889999999999999999999999999999999998888888874 66655544432 89999999
Q ss_pred HHHHHHHHHHHH
Q 008597 525 ASVAFVGCLVAF 536 (560)
Q Consensus 525 ~~l~~la~vl~l 536 (560)
++.+++..+...
T Consensus 250 ~i~~~~~~~~~~ 261 (505)
T TIGR00898 250 SLPTFLFFLLSW 261 (505)
T ss_pred HHHHHHHHHHHH
Confidence 888777766553
No 177
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.49 E-value=1.2e-06 Score=92.97 Aligned_cols=163 Identities=9% Similarity=0.045 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
++|.+...+++...+.-++...++.+.+++|.+..+.+..+++..+...++-+++|.++||.+|+.. .++. +.+...+
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~-~~~~-~~~~~~l 82 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII-ALRL-LALASAI 82 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH-HHHH-HHHHHHH
Confidence 3344555554444433345667889999999999999999999999999999999999999864321 1111 1111111
Q ss_pred HHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCC
Q 008597 427 MSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 506 (560)
Q Consensus 427 ~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~ 506 (560)
..+. +....++.+.+++..++.|..++...+..-.++.+. .|+.+.+||.+.....+|. +++|++.|.+.|..|
T Consensus 83 ~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~-~~g~~l~g~l~~~~g-- 156 (382)
T TIGR00902 83 FAAA-FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAF-IIGSALFGGLIGMFD-- 156 (382)
T ss_pred HHHH-HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHH-HHHHHHHHHHHHHcC--
Confidence 1111 111234455566666777888887777777776553 5788999999988888887 478889999999876
Q ss_pred CCCcccCccccHHHHHHHHHH
Q 008597 507 EGNSCNGTHCFMLSFLIMASV 527 (560)
Q Consensus 507 ~~~~C~G~~cy~~~f~i~~~l 527 (560)
++..|.+.+.+
T Consensus 157 ----------~~~~f~~~~~~ 167 (382)
T TIGR00902 157 ----------EQNILAILTAG 167 (382)
T ss_pred ----------hhHHHHHHHHH
Confidence 88888887655
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.47 E-value=1.2e-06 Score=106.02 Aligned_cols=183 Identities=10% Similarity=0.030 Sum_probs=122.0
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHH-HHcC----CCC-cchhHHHHHHHHhhhhhccccccchhhhhhhcC
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLG----YPT-SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 413 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG----~~~-~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~ 413 (560)
++++|+++|+.+++..++....-.+.-..+..+. ..+. .+. ...+...+++.+...+.-+++|+++||+++|+-
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 4578999999998888776644222222222222 1221 111 223445567888888999999999999976541
Q ss_pred CCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhh
Q 008597 414 WERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 493 (560)
Q Consensus 414 ~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~ 493 (560)
. + ....+......++.+....++...+++..++.|++.+..++..-+++.+++..++.+...|++.++..+|. +++|
T Consensus 85 ~-~-~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~-~igp 161 (1140)
T PRK06814 85 A-K-ILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAI-LLGT 161 (1140)
T ss_pred H-H-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHH-HHHH
Confidence 0 0 01111112222222222234566788889999999999999999999999999999999999999999988 5899
Q ss_pred hhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 494 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 494 ~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
.+.|.+.+..+ ++..|.+.+...+++.+++..
T Consensus 162 ~l~g~l~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 193 (1140)
T PRK06814 162 IIGGLATISGN------------FVILVALLMGIAVLGWLASLF 193 (1140)
T ss_pred HHHHHHHhccc------------cHHHHHHHHHHHHHHHHHHhh
Confidence 99999998765 788885554444444444433
No 179
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.47 E-value=8.3e-07 Score=94.23 Aligned_cols=168 Identities=11% Similarity=0.021 Sum_probs=114.0
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
.|..|.-...+....+.| ++...++.+.+++|.++.+.+.++++..+...++.+++|.++||++|+....| ... +..
T Consensus 4 ~~~~~~~~~~~~~~~~~g-~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~-~~~-~~~ 80 (382)
T PRK11128 4 QPTRWLALSYFGYFFAYG-VFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALR-LLA-LLT 80 (382)
T ss_pred cccHHHHHHHHHHHHHHH-HHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHH-HHH-HHH
Confidence 345565433222222222 34567788999999999999999999999999999999999999976432112 221 111
Q ss_pred HHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 425 ATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 425 ~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
.+. +..... .++.+.+++...+.|++.+...+...+++.+. .|+.+..+|.......+|. .++|++.|.++|..
T Consensus 81 ~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~-~igp~lgg~l~~~~ 155 (382)
T PRK11128 81 LLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAF-VIGSALTGKLVSWF 155 (382)
T ss_pred HHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHH-HHHHHHHHHHHHHc
Confidence 111 112222 23445566667778888888888777776665 4677888888877777776 58889999999987
Q ss_pred cCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 504 ASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 504 g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
| |+..|++.++..++.+
T Consensus 156 g------------~~~~f~~~~~~~~~~~ 172 (382)
T PRK11128 156 G------------EQAILWILTAGVASML 172 (382)
T ss_pred C------------hhHHHHHHHHHHHHHH
Confidence 6 8999988776544443
No 180
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.41 E-value=2.3e-06 Score=103.45 Aligned_cols=156 Identities=10% Similarity=0.082 Sum_probs=111.9
Q ss_pred HHHhcChhHHHHHHHHHHhhhhhhhhhhcHHH-HHHHcCCCCcc--hhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 340 LQSVCTLNFWLLFVAMLCGMGSGLATVNNISQ-IGESLGYPTSA--INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 340 ~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~-i~~~lG~~~~~--aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
.+.+++.+|+.++++.++......++..-+.. +..+.+.+... .+...+++.+...++.+.+|+++||+++|+
T Consensus 3 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~---- 78 (1146)
T PRK08633 3 KNLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNR---- 78 (1146)
T ss_pred cchhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHH----
Confidence 35678899999988887765544433333333 33344444332 466778899999999999999999997543
Q ss_pred hHHHHHHHHHHHHHHH---HH-hhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhh
Q 008597 417 PSFIAITLATMSVGHI---VV-ASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 492 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~l---ll-~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~ 492 (560)
.+.....+.++..+ +. ..++...+++..++.|++.|...+...++++|++..++.+...|+...+..+|. +++
T Consensus 79 --~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~-~lg 155 (1146)
T PRK08633 79 --VIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAI-LAG 155 (1146)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHH-HHH
Confidence 33333332222221 11 123455677788899999999999999999999999999999999988888887 588
Q ss_pred hhhhhhhccc
Q 008597 493 VRIIGYIYDN 502 (560)
Q Consensus 493 ~~l~G~iyD~ 502 (560)
+.+.|.+.+.
T Consensus 156 ~~l~~~l~~~ 165 (1146)
T PRK08633 156 TALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHh
Confidence 8888888875
No 181
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.41 E-value=6.3e-07 Score=102.09 Aligned_cols=160 Identities=14% Similarity=0.123 Sum_probs=117.5
Q ss_pred cHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc----------
Q 008597 368 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG---------- 437 (560)
Q Consensus 368 ~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~---------- 437 (560)
-++++-+..++++.+.+.++|.+.+++.++.++.|++.||.+|++ ++.+..++++++.++++.+
T Consensus 55 ~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~------~i~~g~ll~~lg~ll~alphf~~~~y~~~ 128 (633)
T TIGR00805 55 SLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI------VIGIGCAIMGLGSFLLSLPHFLSGRYSYS 128 (633)
T ss_pred hchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcce------EEEecHHHHHHHHHHHhChHHhcCCcccc
Confidence 445666778999999999999999999999999999999986433 3445556666666544321
Q ss_pred ----------------------------------------C--cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhh
Q 008597 438 ----------------------------------------F--PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT 475 (560)
Q Consensus 438 ----------------------------------------~--~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~ 475 (560)
+ ...++++-++.|++.|..+++.++++.|.+..|+.+.
T Consensus 129 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~ 208 (633)
T TIGR00805 129 TTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPL 208 (633)
T ss_pred ccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHH
Confidence 0 1235567899999999999999999999999999999
Q ss_pred hhhHHHhhhhhHHhhhhhhhhhhhcccccCC-----C-----CCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 476 IFNTIAIASPVGSYVCSVRIIGYIYDNVASG-----E-----GNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 476 ~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~-----~-----~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
..|+...+..+|+ .+++.+.|.+.+...+- + ...=.-.+.|+..|++.+++.++..+.
T Consensus 209 ~~~i~~~~~~iG~-~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~ 276 (633)
T TIGR00805 209 YIGILESIAVFGP-AFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIP 276 (633)
T ss_pred HHHHHHHHHHhhh-HHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888 47888888776543210 0 000000124778899988887776644
No 182
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.39 E-value=4.1e-06 Score=92.56 Aligned_cols=159 Identities=12% Similarity=0.078 Sum_probs=112.0
Q ss_pred hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhc-CCCchHHHHHHHHHHHHHHHHHhh----cC
Q 008597 364 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRM-GWERPSFIAITLATMSVGHIVVAS----GF 438 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~-~~~R~~~l~~~~~l~~~~~lll~~----~~ 438 (560)
+....++.+.++.|.+.++.+.+ +.++.. .+++++||.++||+.+.+ + .|+..+.+..++.+++...... ++
T Consensus 30 ~~~~~l~~~l~~~g~~~~~ig~~-~~~~~~-~~~~~l~gpl~Dr~~~~~~G-rrr~~ll~~~i~~~~~~~~~a~~~~~~~ 106 (491)
T PRK11010 30 LTSGTLQAWMTVENIDLKTIGFF-SLVGQA-YVFKFLWSPLMDRYTPPFLG-RRRGWLLATQLLLLVAIAAMGFLEPGTQ 106 (491)
T ss_pred HHHHHHHHHHHhCCCCHHHHHHH-HHHHHH-HHHHHHHHHHHHcccccCCC-CchHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 34455677778888887766664 333333 268999999999983221 2 2333344445555555433322 22
Q ss_pred cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccH
Q 008597 439 PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFM 518 (560)
Q Consensus 439 ~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~ 518 (560)
...+.+..++.|++.+.......+++.|.+..|+++...++...+..+|.. +++.+.+.+.|+.. .||
T Consensus 107 l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~l-lg~~l~~~l~~~~~-----------GWr 174 (491)
T PRK11010 107 LRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAML-VSGGLALWLADRYL-----------GWQ 174 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH-HHHHHHHHHHhccc-----------CHH
Confidence 334666778889999999999999999999999999999999988888884 77778888888431 299
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 008597 519 LSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 519 ~~f~i~~~l~~la~vl~l~ 537 (560)
.+|++.+++.++..+..+.
T Consensus 175 ~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 175 GMYWLMAALLIPCIIATLL 193 (491)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999888777655443
No 183
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.39 E-value=4.7e-05 Score=82.90 Aligned_cols=138 Identities=17% Similarity=0.104 Sum_probs=88.1
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc--CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL--GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l--G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
+...+||+.|-++.+++.+. +++.-+.+..-.++... |.++................+-+++..+++|++||+
T Consensus 229 ~~~~~~Nrp~~~~l~~~l~~-~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~---- 303 (467)
T COG2211 229 FLLIFKNRPLLLLLLMNLLL-FIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK---- 303 (467)
T ss_pred HHHHHccchHHHHHHHHHHH-HHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH----
Confidence 45688999988887755444 33333333332333333 444333444445555556666999999999997653
Q ss_pred hHHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhhhhccccchhhHHHHhc-------cCCchhhhhhHHHhh
Q 008597 417 PSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIF-------GVGHMGTIFNTIAIA 483 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~F-------G~k~~g~~yG~~~~a 483 (560)
...+...+.+++.+++.. ++...+++..++.+++.+....+..++++|.- |.+.-|..|+.+...
T Consensus 304 --~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~ 378 (467)
T COG2211 304 --LFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFF 378 (467)
T ss_pred --HHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHH
Confidence 334445555666554332 23344556668889999999999999888764 678889999998553
No 184
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.38 E-value=8.3e-06 Score=89.88 Aligned_cols=155 Identities=15% Similarity=0.098 Sum_probs=98.1
Q ss_pred hcHHHHHHHcCCCCcch-hH-----HHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc
Q 008597 367 NNISQIGESLGYPTSAI-NS-----LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFP 439 (560)
Q Consensus 367 ~~~~~i~~~lG~~~~~a-a~-----lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~ 439 (560)
.-.+.+.++...+.++. +. ..++..++-.+|-+++|+++||+++ +..+.+...+++++.++... ++.
T Consensus 37 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr------r~~l~~~~~l~~i~~~~~a~~~~~ 110 (490)
T PRK10642 37 FVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGR------QKILAITIVIMSISTFCIGLIPSY 110 (490)
T ss_pred HHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------HHHHHHHHHHHHHHHHHHHhcccH
Confidence 34455566664333221 11 1355667788999999999999964 44566677777777766543 333
Q ss_pred c--------hHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcc
Q 008597 440 G--------NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSC 511 (560)
Q Consensus 440 ~--------~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C 511 (560)
. .+.+.-++.|++.|+.++....+++|.|..|+.|..-++...+..+|.. +++.+...+....++. .
T Consensus 111 ~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~-lg~~~~~~~~~~~~~~----~ 185 (490)
T PRK10642 111 ATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFV-LGAGVVVLISTIVGEA----N 185 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHH----H
Confidence 2 2566678899999999999999999999999999988888766666653 4443322221100000 0
Q ss_pred cCccccHHHHHHHHHHHHHHH
Q 008597 512 NGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 512 ~G~~cy~~~f~i~~~l~~la~ 532 (560)
...-.+|..|++.+.+.+++.
T Consensus 186 ~~~~gWR~~f~i~~~~~l~~~ 206 (490)
T PRK10642 186 FLDWGWRIPFFIALPLGIIGL 206 (490)
T ss_pred hcCccHHHHHHHHHHHHHHHH
Confidence 000139999998765544433
No 185
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.33 E-value=7.4e-06 Score=87.39 Aligned_cols=173 Identities=11% Similarity=0.004 Sum_probs=104.6
Q ss_pred ChhHHHHHHHHHHhhhhhhhhhhcHHHH-HHHcCCCCcchhHHHHHHHH-hhhhhccccccchhhhhhhcCCCchHHHHH
Q 008597 345 TLNFWLLFVAMLCGMGSGLATVNNISQI-GESLGYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLHRMGWERPSFIAI 422 (560)
Q Consensus 345 t~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~lG~~~~~aa~lvSl~si-~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~ 422 (560)
|..-|.+++..++.....-+....++.+ .+++|.++++.+..++...+ ...++.+..|+ +||+++|+ ..+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~-----~~~~~ 87 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRK-----SLIVF 87 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccchh-----HHHHH
Confidence 4455666555555444333444555554 46789998888888776655 55566777777 89997443 33333
Q ss_pred HHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCch--hhhhhHHHhhhhhHHhhhhhhhhhhh
Q 008597 423 TLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM--GTIFNTIAIASPVGSYVCSVRIIGYI 499 (560)
Q Consensus 423 ~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~--g~~yG~~~~a~~~g~~ll~~~l~G~i 499 (560)
...+.+++..+... ++...+.+...+.|...+...+....++.|....++. +...++...+..+|. +++|++.|.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~-~~g~~i~~~l 166 (393)
T PRK15011 88 CCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAW-VIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHH-HHhhHHHHHH
Confidence 33333344433332 3333344333444444445555566666665554433 222356666777777 4788999999
Q ss_pred cccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 500 YDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 500 yD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
.|..| +|.+|++.++++++..++..
T Consensus 167 ~~~~g------------w~~~f~~~~~~~~~~~~~~~ 191 (393)
T PRK15011 167 AMGFS------------FTVMYLSAAVAFIVCGVMVW 191 (393)
T ss_pred HHhcC------------hHHHHHHHHHHHHHHHHHHH
Confidence 99776 99999999887777665433
No 186
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.31 E-value=7.4e-06 Score=88.40 Aligned_cols=179 Identities=11% Similarity=0.033 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHhhhhhhhhh-hcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATV-NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA 425 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i-~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~ 425 (560)
.|+++...+++- |....+. .-.+++.++.|.++.+.+.+.+...+...++.+..|++.||+++ +..+.+.+.
T Consensus 4 ~~~~~~~~f~~~-G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~------r~~~~~g~~ 76 (410)
T TIGR00885 4 PFALITSLFALW-GFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY------KAGILLGLF 76 (410)
T ss_pred HHHHHHHHHHHH-HHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc------hHHHHHHHH
Confidence 455555444333 2222222 34467777889999999999999999999999999999999964 345566667
Q ss_pred HHHHHHHHHh----hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 426 TMSVGHIVVA----SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 426 l~~~~~lll~----~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
+++++.+++. .++...+.+..++.|++.|...+...+.+.+....++.+..-++......+|.. +++.+.+.+..
T Consensus 77 l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~-~g~~i~~~l~~ 155 (410)
T TIGR00885 77 LYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSI-IGMVVAQQLIL 155 (410)
T ss_pred HHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHh
Confidence 7777776542 123455667788999999999988888888888777788777777665666663 55555555532
Q ss_pred cccCCCC-Ccc-------------cCccccHHHHHHHHHHHHHHHH
Q 008597 502 NVASGEG-NSC-------------NGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 502 ~~g~~~~-~~C-------------~G~~cy~~~f~i~~~l~~la~v 533 (560)
.....+. ... .....++.+|++.+++.++..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~ 201 (410)
T TIGR00885 156 SNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVAL 201 (410)
T ss_pred cCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2100000 000 0012388899888887665543
No 187
>PRK09952 shikimate transporter; Provisional
Probab=98.29 E-value=2.8e-05 Score=84.40 Aligned_cols=129 Identities=14% Similarity=0.140 Sum_probs=87.8
Q ss_pred HHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcc--------hHHHHHHHHHhhhhccccchh
Q 008597 391 SIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPG--------NLYVGSIIVGVCYGCQWSLMP 461 (560)
Q Consensus 391 si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~--------~l~~~~~l~G~~~G~~~~l~p 461 (560)
-++..+|.++.|+++||++| +..+.+...+.+++.++... ++.. .+.+.-++.|++.|+.++...
T Consensus 74 ~~~~~~g~~~~G~l~Dr~Gr------r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~ 147 (438)
T PRK09952 74 FLFRPLGGVVFGHFGDRLGR------KRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAA 147 (438)
T ss_pred HHHHhhHHHHHHHHHHhhcc------HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHH
Confidence 34466778889999999964 34555666676776665543 3322 355667889999999999999
Q ss_pred hHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHH
Q 008597 462 TITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFV 530 (560)
Q Consensus 462 ~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~l 530 (560)
..++|.+..|+.+...+....+..+|.. ++..+.+.+....++.+ .....+|..|++.+...++
T Consensus 148 ~~~~e~~p~~~rg~~~~~~~~g~~~G~~-l~~~~~~~l~~~~~~~~----~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 148 LLAVESAPKNKKAFYSSGVQVGYGVGLL-LSTGLVSLISMMTTDEQ----FLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHH----hhccChHHHHHHHHHHHHH
Confidence 9999999999999888888888888874 55545444432111000 0012499999987765443
No 188
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.28 E-value=8.5e-06 Score=89.58 Aligned_cols=174 Identities=17% Similarity=0.134 Sum_probs=112.5
Q ss_pred hhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc---
Q 008597 364 ATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFP--- 439 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~--- 439 (560)
....+++++.+.+|.++..++....+..+...+.-++.|++|||...|.+..|++ +.......+++++++.. .+.
T Consensus 22 l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~-il~g~~~~~~~l~ll~~~~~~~~~ 100 (477)
T TIGR01301 22 LQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPF-IAAGAALVAFAVILIGFAADIGHL 100 (477)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHH-HHHHHHHHHHHHHHHHhCchhhhh
Confidence 3456778899999999988888999999999999999999999754444322333 33333444445444332 111
Q ss_pred --------------chHHHHHHHHHhhhhccccchhhHHHHhccCCch--hhhhhHHHhhhhhHHhhhhhhhhhhh--cc
Q 008597 440 --------------GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHM--GTIFNTIAIASPVGSYVCSVRIIGYI--YD 501 (560)
Q Consensus 440 --------------~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~--g~~yG~~~~a~~~g~~ll~~~l~G~i--yD 501 (560)
..+.++..+..++.....+-..++++|.+..++. +..+++......+|+. ++..+.|.. ++
T Consensus 101 ~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~i-lg~~~g~~~~~~~ 179 (477)
T TIGR01301 101 FGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNV-LGYAAGAYSGLYK 179 (477)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhHHH
Confidence 0122233344557777777888999999998754 5788887777777774 565445443 33
Q ss_pred cccCCCCCccc-CccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 502 NVASGEGNSCN-GTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 502 ~~g~~~~~~C~-G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
..+-..+..|. -...++.+|++.+++.+++.+++++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v 218 (477)
T TIGR01301 180 IFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAV 218 (477)
T ss_pred hcccccccccccccchHHHHHHHHHHHHHHHHHHHeeee
Confidence 22211112222 334689999998888888776665544
No 189
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.25 E-value=1.3e-05 Score=88.45 Aligned_cols=148 Identities=16% Similarity=0.174 Sum_probs=99.9
Q ss_pred CcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cC------cchHHHHHHHHHhh
Q 008597 380 TSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GF------PGNLYVGSIIVGVC 452 (560)
Q Consensus 380 ~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~------~~~l~~~~~l~G~~ 452 (560)
+.+.+.+.+...++..+|.+++|+++||++|| ..+.+...+..++.++... .+ ...+++.-++.|++
T Consensus 55 ~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~ 128 (502)
T TIGR00887 55 SSVSAAVNGSASIGTLAGQLFFGWLADKLGRK------RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVG 128 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccH------HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHH
Confidence 34556788999999999999999999999644 4444454555555443332 11 23567788899999
Q ss_pred hhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc-----CCCCCcccC------ccccHHHH
Q 008597 453 YGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA-----SGEGNSCNG------THCFMLSF 521 (560)
Q Consensus 453 ~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g-----~~~~~~C~G------~~cy~~~f 521 (560)
.|..++..|.+++|.+..|+++...++......+|.. +++.+...+..... ......|.+ ..-||..|
T Consensus 129 ~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~ 207 (502)
T TIGR00887 129 IGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGIL-AGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILI 207 (502)
T ss_pred HhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccccccccccccccccccchhcccHHHHH
Confidence 9999999999999999999999999999887777773 55555443322110 000001111 12489899
Q ss_pred HHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLV 534 (560)
Q Consensus 522 ~i~~~l~~la~vl 534 (560)
.+.+..+++..+.
T Consensus 208 ~~~~ip~~i~~~~ 220 (502)
T TIGR00887 208 GFGAVPALLALYF 220 (502)
T ss_pred HHHHHHHHHHHHH
Confidence 7776666555443
No 190
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.23 E-value=2.4e-05 Score=84.68 Aligned_cols=147 Identities=15% Similarity=0.143 Sum_probs=92.9
Q ss_pred HHHHHHcC---CCCcchh---HHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc---
Q 008597 370 SQIGESLG---YPTSAIN---SLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFP--- 439 (560)
Q Consensus 370 ~~i~~~lG---~~~~~aa---~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~--- 439 (560)
+.+.++.+ .++.+.. ...+...++..+|-+++|+++||++|| ..+.+...+++++.++... ++.
T Consensus 46 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr------~~l~~~~~~~~~~~~~~~~~~~~~~~ 119 (432)
T PRK10406 46 LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRK------KSMLISVCMMCFGSLVIACLPGYETI 119 (432)
T ss_pred HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcH------HHHHHHHHHHHHHHHHHhhcCCchhH
Confidence 45556664 3333222 233444455558888999999999644 4555666666666655432 222
Q ss_pred -----chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhc----ccccCCCCCc
Q 008597 440 -----GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY----DNVASGEGNS 510 (560)
Q Consensus 440 -----~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iy----D~~g~~~~~~ 510 (560)
..+.+.-++.|++.|+.++....+++|.+..|+.|...++...+...|.. +++.+...+. |.+.
T Consensus 120 ~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~-~~~~~~~~~~~~~~~~~~------ 192 (432)
T PRK10406 120 GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQL-LALLVVVVLQQTLEDAEL------ 192 (432)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCHHHH------
Confidence 24666778999999999999999999999999999888877655555543 3333222221 1100
Q ss_pred ccCccccHHHHHHHHHHHHHH
Q 008597 511 CNGTHCFMLSFLIMASVAFVG 531 (560)
Q Consensus 511 C~G~~cy~~~f~i~~~l~~la 531 (560)
....||..|.+.++++++.
T Consensus 193 --~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 193 --REWGWRIPFALGAVLAVVA 211 (432)
T ss_pred --hccchHHHHHHHHHHHHHH
Confidence 0013999999877665543
No 191
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.23 E-value=1.2e-05 Score=87.69 Aligned_cols=161 Identities=8% Similarity=0.078 Sum_probs=128.5
Q ss_pred HHHHHHHcCCCCcc-hhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHH
Q 008597 369 ISQIGESLGYPTSA-INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGS 446 (560)
Q Consensus 369 ~~~i~~~lG~~~~~-aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~ 446 (560)
.+++.+++|+++++ .+.+.+.+...-++..+..|+++||++ .|+. +.+..+..++..+++. .++...+.+.=
T Consensus 49 ~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG-----~K~v-L~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 49 TPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLR-----YKPV-LVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhC-----chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999998 899999999999999999999999997 4434 3444445555544443 33455677788
Q ss_pred HHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHH
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~ 526 (560)
++.|++-|+.+ ..-..+...|..|+++...++...+..+|.. +++++.+.+ ... |...|+.-.++..+
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~-Ia~~L~qll-~s~---------gWr~y~~Ln~Isl~ 190 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVF-LSSVLGQLL-VTL---------GWISYSTLNIISLV 190 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-Hhc---------CchhHHHHHHHHHH
Confidence 99999999999 8888899999999999999999999999995 677777773 332 45679999999999
Q ss_pred HHHHHHHHHHHHHhhhhhhhH
Q 008597 527 VAFVGCLVAFLLFIRTRRFYK 547 (560)
Q Consensus 527 l~~la~vl~l~l~~r~r~~~~ 547 (560)
...+++++++++-..+|..|-
T Consensus 191 s~~~a~~~a~~LP~~~~sl~f 211 (511)
T TIGR00806 191 FMTFSVFLALFLKRPKRSLFF 211 (511)
T ss_pred HHHHHHHHHHhCCCCchhhhh
Confidence 999999999988766666553
No 192
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.23 E-value=3.9e-06 Score=88.36 Aligned_cols=149 Identities=17% Similarity=0.132 Sum_probs=125.8
Q ss_pred cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhh
Q 008597 376 LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYG 454 (560)
Q Consensus 376 lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G 454 (560)
+.-++++.+++.+..++.+.+--.+.|.+.||++ ++..+.+.+.++..+..++++ +++..++++=.+=|++..
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iG------y~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA 174 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIG------YKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSA 174 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhc------cccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHH
Confidence 3455667889999999999999999999999985 445677788888888887775 455678888899999999
Q ss_pred ccccchhhHHHHhccCCch-hhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 455 CQWSLMPTITYEIFGVGHM-GTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 455 ~~~~l~p~i~~e~FG~k~~-g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
..+..--++++|.|+.++- |+.-|+......+|- +.+|+..|.+||.-| |+.+|+++++++++...
T Consensus 175 ~~~tsglamlAd~f~~d~er~~vmGialgfislG~-lvgPpfGGilYe~~G------------k~aPFlVL~~v~Lld~~ 241 (464)
T KOG3764|consen 175 FADTSGLAMLADVFPEDNERGSVMGIALGFISLGV-LVGPPFGGILYEFAG------------KSAPFLVLAIVLLLDGA 241 (464)
T ss_pred HHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccc-eecCCcccchHhhcC------------CcCcHHHHHHHHHHHHH
Confidence 9999999999999997774 888888876677777 588899999999988 89999999999999998
Q ss_pred HHHHHHhhhh
Q 008597 534 VAFLLFIRTR 543 (560)
Q Consensus 534 l~l~l~~r~r 543 (560)
+-+.+...+|
T Consensus 242 L~l~vi~p~~ 251 (464)
T KOG3764|consen 242 LQLLVIEPTE 251 (464)
T ss_pred HHHheeCccc
Confidence 8887765544
No 193
>PRK10133 L-fucose transporter; Provisional
Probab=98.20 E-value=2.2e-05 Score=85.42 Aligned_cols=136 Identities=13% Similarity=0.046 Sum_probs=99.0
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLAT 426 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l 426 (560)
.|+++++.++.....-......+|++.+++|.++.+.+..++.+.+...++-+..|.++||+++| ..+.+.+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r------~~l~~g~~~ 100 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK------AGIITGLFL 100 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH------HHHHHHHHH
Confidence 56667666666555555555667888888999999999999999999999999999999999643 455566667
Q ss_pred HHHHHHHH---h-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHH
Q 008597 427 MSVGHIVV---A-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 427 ~~~~~lll---~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~ 488 (560)
.+++.++. . .++...+.++-++.|++.|........++.|....++....-++......+|+
T Consensus 101 ~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~ 166 (438)
T PRK10133 101 YALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGA 166 (438)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHH
Confidence 77776543 2 23445677788999999999999999998886544433334555544444444
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.19 E-value=1.5e-05 Score=85.13 Aligned_cols=153 Identities=13% Similarity=0.112 Sum_probs=109.2
Q ss_pred hcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhc-CCCchHHHHHHHHHHHHHHHHHhhc----Ccch
Q 008597 367 NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRM-GWERPSFIAITLATMSVGHIVVASG----FPGN 441 (560)
Q Consensus 367 ~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~-~~~R~~~l~~~~~l~~~~~lll~~~----~~~~ 441 (560)
.-+|.+.++.|++.++.+.+.++... .+.+++||.++||+..+. + .|+.++.+...+++++...+... +...
T Consensus 20 ~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g-~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~ 96 (402)
T PRK11902 20 GTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLG-RRRGWLLLTQVGLAASIAAMAFCPPHAALWP 96 (402)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCC-cchhHHHHHHHHHHHHHHHHHhcCccchHHH
Confidence 45677788999999998887665555 588999999999993211 1 22233444455555544433321 1233
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHH
Q 008597 442 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 442 l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
+++..++.+++.........+++.|.+..|+.+...++...+..+|.. +++.+.+.+.+... .++..|
T Consensus 97 l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i-~g~~l~~~l~~~~~-----------gw~~~f 164 (402)
T PRK11902 97 LAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAML-VSGGLALWLADRVL-----------GWGNTY 164 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHH-HHhHHHHHHHhccc-----------CHHHHH
Confidence 455556678888888888999999999999999999999888888874 67778888888542 289999
Q ss_pred HHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLV 534 (560)
Q Consensus 522 ~i~~~l~~la~vl 534 (560)
.+.+++.++..+.
T Consensus 165 ~i~a~~~l~~~l~ 177 (402)
T PRK11902 165 LLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHH
Confidence 9988877665543
No 195
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.17 E-value=1.3e-05 Score=83.94 Aligned_cols=163 Identities=14% Similarity=0.058 Sum_probs=110.1
Q ss_pred hcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHhhc----Ccch
Q 008597 367 NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHR-MGWERPSFIAITLATMSVGHIVVASG----FPGN 441 (560)
Q Consensus 367 ~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~-~~~~R~~~l~~~~~l~~~~~lll~~~----~~~~ 441 (560)
.-++.+.++.|.+.++.+....+ .+...+ ++++|.++||+..| .+ .|+.++.....+.+++.+.+... ....
T Consensus 9 ~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~G-rr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 9 NTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFG-RRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred hHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCC-ccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 35577888999998887776433 444444 99999999998533 23 22233334444444444333221 1223
Q ss_pred HHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHH
Q 008597 442 LYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSF 521 (560)
Q Consensus 442 l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f 521 (560)
++...++.+++.+......-+++.|.+..|+.+...|+...+..+|. ++++.+.+.+.+..+..+ .....|+..|
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~-~~~~~l~~~l~~~~g~~~----~~~~~wr~~f 160 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGM-LLSGSLALVLASPEFANT----GLITLWGYIF 160 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHH-HHHHHHHHHHhhhccccc----ccccccHHHH
Confidence 44455667778887777888899999999999999999988888887 477788888887765211 1244699999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 522 LIMASVAFVGCLVAFL 537 (560)
Q Consensus 522 ~i~~~l~~la~vl~l~ 537 (560)
++.+++.+++.+..++
T Consensus 161 ~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 161 FWTALLILPGLLVTLF 176 (356)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988877776654443
No 196
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.10 E-value=1.7e-05 Score=87.54 Aligned_cols=153 Identities=16% Similarity=0.197 Sum_probs=113.7
Q ss_pred HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhh
Q 008597 374 ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCY 453 (560)
Q Consensus 374 ~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~ 453 (560)
+++++...+-+.+.+++.+.-++|.+.+|++.||+. .+.........-..++.+-...++...+.+.=++.|+.-
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~-----ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~e 148 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFP-----LSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFE 148 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCC-----hHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 455566667788999999999999999999999984 122222222222122222223456667777789999999
Q ss_pred hccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 454 GCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 454 G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
++.|+..-.+++.+|+.++++...|+.+.+..+|+. ++..++..++..++. .+...||+.|++.++++++..+
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i-~ggliA~g~~~~~~~------~~~~gW~~~FiI~G~i~~~~gi 221 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNI-FGGLIAYGVFKLNGS------GGLAGWRWLFIIEGVITLVLGI 221 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhH-HHHHHHHHhhhhcCC------CCcCCceeehhHHHHHHHHHHh
Confidence 999999999999999999999999999988888884 777777776654443 2345799999999998877765
Q ss_pred HHHHH
Q 008597 534 VAFLL 538 (560)
Q Consensus 534 l~l~l 538 (560)
+..+.
T Consensus 222 ~~f~~ 226 (495)
T KOG2533|consen 222 VVFFF 226 (495)
T ss_pred eEEEE
Confidence 55443
No 197
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.10 E-value=1.4e-05 Score=85.78 Aligned_cols=164 Identities=15% Similarity=0.150 Sum_probs=100.6
Q ss_pred hhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc----
Q 008597 366 VNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFP---- 439 (560)
Q Consensus 366 i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~---- 439 (560)
...+.++.+ .+|+++.+++.+.++..+++++..++.|+++||..+|++..|++.+ ....+.+++.+++.. +..
T Consensus 19 ~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~-~~~~~~~i~~~~~~~~~~~~~~~ 97 (437)
T TIGR00792 19 STYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLL-IGAIPFSIVLVLLFTTPDFSATG 97 (437)
T ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHH-HhHHHHHHHHHHHHhCCCCCcch
Confidence 334445544 6799999999999999999999999999999999877764455554 344444544443332 111
Q ss_pred --chHHHHHHHHHhhhhccccchhhHHHHhcc-CCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccc
Q 008597 440 --GNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 516 (560)
Q Consensus 440 --~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG-~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~c 516 (560)
..+.+..++.+.+++.....+-++..|... .++.+...++...+..+|.. +...+.+.+....++.+ ....
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~-l~~~~~~~l~~~~~~~~-----~~~g 171 (437)
T TIGR00792 98 KLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGL-LVAVIVLPLVSYFGGGD-----DKFG 171 (437)
T ss_pred HHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCc-----cccc
Confidence 123334566677777655555566667663 56788877776655555553 22223333332111000 0124
Q ss_pred cHHHHHHHHHHHHHHHHHHH
Q 008597 517 FMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 517 y~~~f~i~~~l~~la~vl~l 536 (560)
|+..+.+.++++++..++..
T Consensus 172 ~~~~~~i~~~l~~~~~~~~~ 191 (437)
T TIGR00792 172 WFMFALVLALIGVVSLIICF 191 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88888888887776665443
No 198
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.06 E-value=2.1e-05 Score=85.31 Aligned_cols=147 Identities=23% Similarity=0.376 Sum_probs=119.3
Q ss_pred HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc---CcchHHHHHHH
Q 008597 372 IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG---FPGNLYVGSII 448 (560)
Q Consensus 372 i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~---~~~~l~~~~~l 448 (560)
..+.+|++++++..+++.++-.--.--++.||++||+. +++.++.+.-+++.++++++..+ .+..++++.++
T Consensus 52 ~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~L-----G~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~ 126 (498)
T COG3104 52 LGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVL-----GTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLAL 126 (498)
T ss_pred ccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhc-----chhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHH
Confidence 33346799998888888888888889999999999995 66667777888999999988754 46789999999
Q ss_pred HHhhhhccccchhhHHHHhccCCchh--hhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHH
Q 008597 449 VGVCYGCQWSLMPTITYEIFGVGHMG--TIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 449 ~G~~~G~~~~l~p~i~~e~FG~k~~g--~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~ 526 (560)
+++++|.+=+-...+++|.++.++.- ..+++..++--+|++ ++|.+.+++-+..| |...|-+++.
T Consensus 127 I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl-~~p~i~~~~~~~~g------------~~~gF~~aav 193 (498)
T COG3104 127 IIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL-IAPIITGLLAINYG------------WHVGFGLAAV 193 (498)
T ss_pred HHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH-HHHHHHHHHHHhhC------------HHHHHHHHHH
Confidence 99999999999999999999977543 345555667778884 88889999998764 9999998887
Q ss_pred HHHHHHHHHH
Q 008597 527 VAFVGCLVAF 536 (560)
Q Consensus 527 l~~la~vl~l 536 (560)
-..++++.-+
T Consensus 194 Gm~~gl~~f~ 203 (498)
T COG3104 194 GMIIGLVIFL 203 (498)
T ss_pred HHHHHHHHHH
Confidence 7777765433
No 199
>PRK15075 citrate-proton symporter; Provisional
Probab=98.05 E-value=0.00013 Score=78.97 Aligned_cols=119 Identities=18% Similarity=0.136 Sum_probs=80.7
Q ss_pred hhhhcHHHHHHHcCCCCcchhHH-HHHH-----HHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-
Q 008597 364 ATVNNISQIGESLGYPTSAINSL-VSLW-----SIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS- 436 (560)
Q Consensus 364 ~~i~~~~~i~~~lG~~~~~aa~l-vSl~-----si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~- 436 (560)
.+....+++.++++.++.+...+ .+.. .+...+|-+++|+++||++|| ..+.....+.+++..+...
T Consensus 33 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr------~~l~~~~~~~~~~~~l~~~~ 106 (434)
T PRK15075 33 LFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR------KGLIVTLSIMASGTLLIAFV 106 (434)
T ss_pred HHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH------HHHHHHHHHHHHHHHHHHhC
Confidence 34445577788888877664433 2222 222346778899999999644 3455555566666655443
Q ss_pred cCcc--------hHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHH
Q 008597 437 GFPG--------NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 437 ~~~~--------~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~ 488 (560)
++.. .+.+.-++.|++.|..++..+.+++|.+..|+.+...++...+..+|.
T Consensus 107 ~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~ 166 (434)
T PRK15075 107 PGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAV 166 (434)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHH
Confidence 2322 245667889999999999889999999999999999998755444443
No 200
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.04 E-value=3.3e-05 Score=86.07 Aligned_cols=175 Identities=13% Similarity=0.072 Sum_probs=119.1
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchH
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPS 418 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~ 418 (560)
.+.-+|+++|..+|.+-.+......+...-++-+..++.-++...+.+.....+-..+--+..|.+.||+.|| .
T Consensus 3 ~~aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr------r 76 (524)
T PF05977_consen 3 AFAPLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR------R 76 (524)
T ss_pred CcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch------H
Confidence 3566899999999998877654444333333334444444444444444555555666678899999999543 3
Q ss_pred HHHHHHHHHHHHHHH---Hh-h--cCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhh
Q 008597 419 FIAITLATMSVGHIV---VA-S--GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 492 (560)
Q Consensus 419 ~l~~~~~l~~~~~ll---l~-~--~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~ 492 (560)
.+..+..+.++..++ +. . .+++.+++.+++.|++.....+..-+++.|+...++...+.++..+...+.- ++|
T Consensus 77 ili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar-~iG 155 (524)
T PF05977_consen 77 ILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIAR-IIG 155 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHH-hcc
Confidence 444444444332221 11 1 2445678889999999999999999999999999999999998887777666 478
Q ss_pred hhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHH
Q 008597 493 VRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGC 532 (560)
Q Consensus 493 ~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~ 532 (560)
|.++|.++...| ...+|.+.+...++++
T Consensus 156 PalgG~Lva~~G------------~~~~f~inalsfl~~i 183 (524)
T PF05977_consen 156 PALGGILVAFFG------------AAAAFLINALSFLISI 183 (524)
T ss_pred chHHHHHHHHHH------------HHHHHHHHHHHHHHHH
Confidence 888999888766 5677877766555443
No 201
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.03 E-value=2.8e-06 Score=91.08 Aligned_cols=155 Identities=14% Similarity=0.154 Sum_probs=122.7
Q ss_pred cHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHH
Q 008597 368 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPGNLYVGS 446 (560)
Q Consensus 368 ~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~~l~~~~ 446 (560)
-.+.+.+..+.++...+.+-+.+.+.-.+.-.+.|++.||+ +|++.+++...+..++.+.-.+ ...+.+.++=
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry------NR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R 128 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY------NRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCR 128 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc------CcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556788888888999999999999999999999998 5556666666666666655443 3335677788
Q ss_pred HHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHH
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMAS 526 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~ 526 (560)
.++|++-.....+.|++++|.|-..+.+..+++.+++..+|+. +|-...+++-+.++. ||.+|.+.++
T Consensus 129 ~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg-lG~vvgs~va~~~~~-----------Wr~af~~~av 196 (493)
T KOG1330|consen 129 GFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG-LGYVVGSVVASLTFW-----------WRWAFRGSAV 196 (493)
T ss_pred HHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc-eeEEeeeeeccCccc-----------eEEEEEeehH
Confidence 9999999999999999999999999999999999999999984 665555566666553 9999999999
Q ss_pred HHHHHHHHHHHHHh
Q 008597 527 VAFVGCLVAFLLFI 540 (560)
Q Consensus 527 l~~la~vl~l~l~~ 540 (560)
+.++..++..+...
T Consensus 197 l~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 197 LGVIVGLLVFLFVR 210 (493)
T ss_pred HHHHHHHHHHhhcc
Confidence 98887766655543
No 202
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.99 E-value=1.3e-06 Score=97.54 Aligned_cols=74 Identities=20% Similarity=0.124 Sum_probs=0.0
Q ss_pred CcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHH-hhhhhccccccchhhhhh
Q 008597 337 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSI-WNFLGRFGGGYVSDIVLH 410 (560)
Q Consensus 337 ~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si-~n~~GRl~~G~lsD~~~~ 410 (560)
.++++++|||.|-.+.++..+-......+...+|.+.|.+ +.++.+++.+..+..+ +.++|-+++|++..|+.-
T Consensus 296 ~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl 371 (539)
T PF03137_consen 296 KALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKL 371 (539)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecC
Confidence 4678999999999988888777766667788899998865 9999999888877777 677999999999888743
No 203
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.97 E-value=8.2e-05 Score=77.61 Aligned_cols=130 Identities=18% Similarity=0.221 Sum_probs=87.3
Q ss_pred hhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcc--------hHHHHHHHHHhhhhccccchhhH
Q 008597 393 WNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPG--------NLYVGSIIVGVCYGCQWSLMPTI 463 (560)
Q Consensus 393 ~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~--------~l~~~~~l~G~~~G~~~~l~p~i 463 (560)
...+|.++.|+++||+++| ..+.+...+..++.++... ++.. .+.+.-++.|++.|..++..+.+
T Consensus 47 ~~~i~~~~~G~l~dr~g~r------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~ 120 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRK------KTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALY 120 (394)
T ss_pred HhhhHHHHhhhhhhhhhhH------HHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHH
Confidence 3456889999999999643 3444555666666655442 2221 35566788999999999999999
Q ss_pred HHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHH
Q 008597 464 TYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCL 533 (560)
Q Consensus 464 ~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~v 533 (560)
++|.+..|+.+...++...+..+|.. +++.+.+.+.+..+... .....|+..|++.+.+++++.+
T Consensus 121 ~~~~~~~~~r~~~~~~~~~~~~~G~~-i~~~~~~~~~~~~~~~~----~~~~~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 121 LAEYAPPGKRGFYGSFQQVGAPVGLL-LAALTVLLLSYLLGDDA----LLEWGWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred hhhcCCcccchHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCHHH----hhccchHHHHHHHHHHHHHHHH
Confidence 99999999999999998887777774 56555544432111000 0012388999887766655543
No 204
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.95 E-value=5e-05 Score=84.21 Aligned_cols=139 Identities=17% Similarity=0.069 Sum_probs=110.1
Q ss_pred CCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhcc
Q 008597 378 YPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQ 456 (560)
Q Consensus 378 ~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~ 456 (560)
.+........+++-++..+|-+++|.+||++| |+..+..++.+..++.+..+ ..+...+.+.-++.|++.++.
T Consensus 115 ~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~G------Rk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~ 188 (521)
T KOG0255|consen 115 DSSTLVALGQSLFFLGVLVGSLIFGPLSDRFG------RKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGP 188 (521)
T ss_pred CcHhHHHHHHHHHHHHHHHHHhhheehHhhcc------cHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccch
Confidence 44445566778999999999999999999974 55666667676666665554 355667888899999999999
Q ss_pred ccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 457 WSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 457 ~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
+.+...+.+|+++.|+++..-.+ ......+++ +.+++.+++... ||..+++.....++.+++.+
T Consensus 189 ~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~-~~~~~~a~~~~~--------------Wr~~~~~~~~~~~~~~~~~~ 252 (521)
T KOG0255|consen 189 LTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGL-MLPAGAAYITRD--------------WRWLFWIISIPSGLFLLLWF 252 (521)
T ss_pred hHHhHhhheeecCcchhhHHHHH-HHHHHHHHH-HHHHHHHHHHhh--------------HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998888 566677774 566777777761 99999999988888776643
Q ss_pred HH
Q 008597 537 LL 538 (560)
Q Consensus 537 ~l 538 (560)
+.
T Consensus 253 l~ 254 (521)
T KOG0255|consen 253 LP 254 (521)
T ss_pred cc
Confidence 33
No 205
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.93 E-value=0.0018 Score=69.09 Aligned_cols=191 Identities=17% Similarity=0.223 Sum_probs=121.4
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCc
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWER 416 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R 416 (560)
.+.+...+|+--.++...++...+-.|==--+-|++ +-+|++..+...+-++.+..-.+|-++.|++..+- .+..|
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~---~~~~~ 276 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRR---LGKKR 276 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCchH
Confidence 346667777766666555554322221111122333 44689988888888999999999999999886642 22233
Q ss_pred hHHHHHHHHHHHHHHHHHh--hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhh
Q 008597 417 PSFIAITLATMSVGHIVVA--SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVR 494 (560)
Q Consensus 417 ~~~l~~~~~l~~~~~lll~--~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~ 494 (560)
...+-+.....++..+.+. ..++..+..+.+++|++.|.+..-.-....|.-..++-|..-|.-..+..++- -++..
T Consensus 277 ~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~-Glg~~ 355 (403)
T PF03209_consen 277 TAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIAR-GLGTF 355 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHH-HHHHH
Confidence 3323333333333333332 34566788899999999999888888889999999999988887766666655 35566
Q ss_pred hhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 495 IIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 495 l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
+.|.+.|.-..-.++ .-..-|...|.+=+.+.++++++
T Consensus 356 ~GG~~~D~~~~~~~~--~~~~aY~~VF~lEa~ll~~a~~l 393 (403)
T PF03209_consen 356 LGGALRDLVRALFGN--SPALAYGVVFALEAVLLLAALVL 393 (403)
T ss_pred HHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHH
Confidence 788888853210000 01235888888877776666544
No 206
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.87 E-value=6.6e-05 Score=82.49 Aligned_cols=146 Identities=15% Similarity=0.212 Sum_probs=118.8
Q ss_pred cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh---cCcchHHHHHHHHHhh
Q 008597 376 LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS---GFPGNLYVGSIIVGVC 452 (560)
Q Consensus 376 lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~---~~~~~l~~~~~l~G~~ 452 (560)
...++++.+.+.|.+.++..++-+-.|++.||++.| +. +..+..+.+++.++.+. .....+.+.=++-|++
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v-~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RV-FFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HH-HHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 356677788999999999999999999999999743 23 34445555666555442 1223566678999999
Q ss_pred hhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccc-ccCCCCCcccCccccHHHHHHHHHHHHHH
Q 008597 453 YGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDN-VASGEGNSCNGTHCFMLSFLIMASVAFVG 531 (560)
Q Consensus 453 ~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~-~g~~~~~~C~G~~cy~~~f~i~~~l~~la 531 (560)
+|..++.+..++++...+++.+...+++..+..+|+. ++-+++|++-+. .| ++..|++.+++.++-
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v-~~mp~sg~lc~s~~G------------W~sifY~~g~~g~i~ 208 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTI-ITMPVSGLLCESSLG------------WPSIFYVFGIVGLIW 208 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHhccCCC------------CchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999995 777899999998 44 999999999999888
Q ss_pred HHHHHHHHh
Q 008597 532 CLVAFLLFI 540 (560)
Q Consensus 532 ~vl~l~l~~ 540 (560)
.+++.++..
T Consensus 209 ~~~w~~~~~ 217 (466)
T KOG2532|consen 209 FILWFLFYS 217 (466)
T ss_pred HHHHHHHhc
Confidence 877776654
No 207
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.80 E-value=0.0003 Score=74.95 Aligned_cols=122 Identities=14% Similarity=0.121 Sum_probs=88.1
Q ss_pred HHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--hc--CcchHHHHH
Q 008597 371 QIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA--SG--FPGNLYVGS 446 (560)
Q Consensus 371 ~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~--~~--~~~~l~~~~ 446 (560)
+|.++.|+++.|.+.++++-.+..++-|+.-|.+.||++ +|.|.. +.+.+..+-++.+. .. +++.+++..
T Consensus 39 ~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfG-----gR~~~~-~s~~l~~IP~~~~~~a~~~~~~~~ll~~g 112 (417)
T COG2223 39 FIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFG-----GRKWTI-LSMLLLLIPCLGLAFAVTYPSTWQLLVIG 112 (417)
T ss_pred hhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccC-----chHHHH-HHHHHHHHHHHHHHHHccCCchHHHHHHH
Confidence 444778999999999999999999999999999999998 665654 34444455444333 22 224677888
Q ss_pred HHHHhhhhccccchhhHHHHhccCCchhhhhhHHH---hhhhhHHhhhhhhhhhhhc
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIA---IASPVGSYVCSVRIIGYIY 500 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~---~a~~~g~~ll~~~l~G~iy 500 (560)
.+.|++-|. |++.-+.+++.|.+|+.|.+-|+-. ++..+.. +++|+++..+-
T Consensus 113 ll~G~~Gas-Fav~m~~~s~~fP~~~qG~AlGI~g~GN~G~av~q-~~~P~v~~~~g 167 (417)
T COG2223 113 LLLGLAGAS-FAVGMPNASFFFPKEKQGLALGIAGAGNLGVAVAQ-LVAPLVAVAFG 167 (417)
T ss_pred HHHhcccce-ehcccccccccCChhhhhHHHHHhccccccHHHHH-HHHHHHHHHHh
Confidence 888988666 4555555999999999999998874 3344444 25555555444
No 208
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.79 E-value=0.0014 Score=71.36 Aligned_cols=112 Identities=14% Similarity=0.125 Sum_probs=79.3
Q ss_pred ccHHHHhhcCCChhhhhHHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhc
Q 008597 35 YSSTLKSSQNYDQSTLDTVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVG 114 (560)
Q Consensus 35 ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~ 114 (560)
-.+-+|+++|++.+|++.+....++.-.+-++.|++.|.++-.-.| .|+=+++|+++..+++..+.+ ...
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~Kp~~g~lsD~~pi~G~r---------r~~Y~~i~~~~~~~~~~~~~~-~~~ 81 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSIKPLYGLLSDSFPIFGYR---------RKPYMIIGWLLGAVSALVLAL-LPA 81 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHHhhhHHhhcccccccCCc---------chHHHHHHHHHHHHHHHHHHh-ccc
Confidence 3478999999999999999988888888899999999998632212 466678888888776665422 233
Q ss_pred cCCCCcHHHHHHHHHHhhcccchhhhhhH---HHHhhhccCCCccee
Q 008597 115 LIHSPPVPLMCLFMFLAAHSQTFFNTGNV---VTGVMNFGDYGGTIV 158 (560)
Q Consensus 115 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~---~t~~~~Fp~~RG~a~ 158 (560)
... +......+.+++..|..+.|.++= +-.++.-|.+||...
T Consensus 82 ~~~--s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lq 126 (433)
T PF03092_consen 82 SES--SAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQ 126 (433)
T ss_pred ccc--hhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHH
Confidence 222 234455666777888888888764 444566677766543
No 209
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.78 E-value=0.024 Score=62.02 Aligned_cols=147 Identities=14% Similarity=0.086 Sum_probs=94.4
Q ss_pred cCCChhhhh-HHHHHHhhhhhhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcH
Q 008597 43 QNYDQSTLD-TVSVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPV 121 (560)
Q Consensus 43 ~~~s~~~~~-~i~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~ 121 (560)
+|+|+++-. ..+....+.-...+++|++.||+ .|.|.++.+|+++..+|++++... +. .+ +.
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~-------------LG~~~tI~lGail~~iGh~~L~~~--~~-~~-~~ 118 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRV-------------LGTRRTIVLGAILMAIGHLVLAIS--SV-SG-PG 118 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHh-------------cchhHHHHHHHHHHHHHHHHHhcc--cc-cc-cc
Confidence 669998887 44444444444588999999998 589999999999999999995333 21 11 22
Q ss_pred HHHHHHHHHhhcccchhhhhhHHHHhhhccC---CCcceeeehhhhhhhhHHHHHHHHHHhcCCC-chhHHHHHHHHhHH
Q 008597 122 PLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD---YGGTIVGIMKGFLGLGGAALIQAYDTIWKGR-PSTYLLILALLPTF 197 (560)
Q Consensus 122 ~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~---~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~~~-~~~fll~la~~~~~ 197 (560)
.++....+|. .|.|.+=..+.+-.-+-||+ +|=...++.-.+.-+|+. ++++......++ ....-+-++.+-..
T Consensus 119 gl~i~L~~I~-iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl-~~p~i~~~~~~~~g~~~gF~~aavGm~ 196 (498)
T COG3104 119 GLYIGLALII-VGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSL-IAPIITGLLAINYGWHVGFGLAAVGMI 196 (498)
T ss_pred HHHHHHHHHH-hccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHH-HHHHHHHHHHHhhCHHHHHHHHHHHHH
Confidence 3455455554 88888877777777778863 244455555555666744 444444444333 33444445666666
Q ss_pred HHHhhheeeee
Q 008597 198 ASLLFMSLVRI 208 (560)
Q Consensus 198 v~~~~~~~ir~ 208 (560)
.+++..++.|.
T Consensus 197 ~gl~~f~~~~r 207 (498)
T COG3104 197 IGLVIFLLGRR 207 (498)
T ss_pred HHHHHHHHccc
Confidence 77776666654
No 210
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.77 E-value=0.00021 Score=79.30 Aligned_cols=133 Identities=20% Similarity=0.231 Sum_probs=102.3
Q ss_pred hHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhh
Q 008597 384 NSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPT 462 (560)
Q Consensus 384 a~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~ 462 (560)
+++.|...+.+.+|.+.+|.++|+++|| ..+.++.++..++.++.. ..+...+.++-++.|++.|....+.|.
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk------~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~pi 165 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK------KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchh
Confidence 7899999999999999999999999644 455566666666666554 346678999999999999999999999
Q ss_pred HHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 463 ITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 463 i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
.++|+=..+.+|..-.+..+...+|-. ++ .+.|+..+.. . ..||..+.+..+.+++-.+.
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~-~~-~~~~~~~~~~-~---------~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGIL-LG-YCINYGTSKV-Y---------AGWRIPLGLALIPAVILALG 225 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHH-HH-HHHhhhhccC-C---------ccHHHHHHHHHHHHHHHHHH
Confidence 999999988999888777776665553 44 4555555432 0 13888888877777666655
No 211
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.72 E-value=0.00016 Score=78.17 Aligned_cols=175 Identities=13% Similarity=0.013 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhh--------hhHHHHHHhhhhhh-hhhHHHHHhhcccccccccc
Q 008597 13 WIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQST--------LDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTR 83 (560)
Q Consensus 13 w~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~--------~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~ 83 (560)
|..++..++++......| .|.+...++.++++++ ...+.....++..+ .++.|.+.||+|
T Consensus 211 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g-------- 279 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITN---IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFG-------- 279 (418)
T ss_pred eeHHHHHHHHHhHHHHHH---HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 344555555444433333 4445555566666532 23222222223322 456777777765
Q ss_pred ccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehh
Q 008597 84 FSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMK 162 (560)
Q Consensus 84 ~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~ 162 (560)
+|.++.++.++..+++.++... ... ...++.+....++.|.+.+..+.+...-..+++| ++||++.|+..
T Consensus 280 ------~r~~l~~~~~~~~v~~~l~~~~-~~~--~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~ 350 (418)
T TIGR00889 280 ------IKKVMLLSLVAWALRFGFFAYG-DPE--YFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFT 350 (418)
T ss_pred ------cHHHHHHHHHHHHHHHHHHHHc-Ccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
Confidence 8999999999988887664221 111 0113445555677777777777777777889998 57999999996
Q ss_pred -hhhhhhHHHHHHHHHHhcCC---C----chhHHHHHHHHhHHHHHhhheeee
Q 008597 163 -GFLGLGGAALIQAYDTIWKG---R----PSTYLLILALLPTFASLLFMSLVR 207 (560)
Q Consensus 163 -~~~GLsa~i~s~i~~~~f~~---~----~~~fll~la~~~~~v~~~~~~~ir 207 (560)
...++|+++-+.+.-.+++- + .+.-+++.++.....+++..++++
T Consensus 351 ~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 351 LMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 56777777766665554421 1 122233444455555555555554
No 212
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.70 E-value=0.00015 Score=80.67 Aligned_cols=150 Identities=15% Similarity=0.113 Sum_probs=118.3
Q ss_pred HHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHH-HHH
Q 008597 370 SQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPGNLYV-GSI 447 (560)
Q Consensus 370 ~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~~l~~-~~~ 447 (560)
..+.++.+.+..+.++..|+..-...+.-++.+.+.||++ .|.. .++.-++..+++++..+ ++.+.+++ ..+
T Consensus 70 ~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg-----~R~v-~i~G~~v~~~g~~lssF~~~i~~l~lt~gv 143 (509)
T KOG2504|consen 70 EELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG-----CRTV-MIAGGLVAALGLLLSSFATSLWQLYLTFGV 143 (509)
T ss_pred HHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC-----chHH-HHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3455667888788889999888888888888899999996 3433 44555677777776553 34455666 478
Q ss_pred HHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHH
Q 008597 448 IVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASV 527 (560)
Q Consensus 448 l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l 527 (560)
+.|+|.|..+.-..+++..+|- |+++.+-|+...+.++|.+++. ++--++.|..| +|.++++.+.+
T Consensus 144 i~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G~~~~~-~l~~~l~~~~G------------~r~~~l~~~~~ 209 (509)
T KOG2504|consen 144 IGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVGTVVFP-PLLKYLLSKYG------------WRGALLIFGGI 209 (509)
T ss_pred HhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcceeeHH-HHHHHHHHHhC------------cHHHHHHHHHH
Confidence 8999999999999999998888 9999999999999999998775 57889999988 89999999999
Q ss_pred HHHHHHHHHHHH
Q 008597 528 AFVGCLVAFLLF 539 (560)
Q Consensus 528 ~~la~vl~l~l~ 539 (560)
++-.++..+.++
T Consensus 210 ~l~~~~~~~~~r 221 (509)
T KOG2504|consen 210 SLNVLVAGALLR 221 (509)
T ss_pred HHHHHHHHHHcC
Confidence 866665555443
No 213
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.64 E-value=0.00072 Score=70.96 Aligned_cols=172 Identities=15% Similarity=0.114 Sum_probs=117.1
Q ss_pred HHHHHHHHHhhhhhhhhhhcHHH----HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHH
Q 008597 349 WLLFVAMLCGMGSGLATVNNISQ----IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITL 424 (560)
Q Consensus 349 wll~~~~~~~~g~gl~~i~~~~~----i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~ 424 (560)
|++.....+....-=..+..++| |-+++|++.+.++.+.++--++=...-++..++.-|++ .+|.. ...+
T Consensus 11 ~~li~gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g----~er~l--~~~L 84 (395)
T COG2807 11 LLLLAGIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFG----EERSL--FLAL 84 (395)
T ss_pred hHHHHHHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh----hHHHH--HHHH
Confidence 55555454444433334444444 44577999999998888888877777777777766664 44533 4556
Q ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhccccc
Q 008597 425 ATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVA 504 (560)
Q Consensus 425 ~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g 504 (560)
++.+++.++=.......++.++.++|.+-+..-.+.|.++.+.|+ |+.+..-|+-.++-.+|+- +++.+.=.+.++.+
T Consensus 85 lli~~G~~iR~~~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aa-Laa~lavpla~~~~ 162 (395)
T COG2807 85 LLIAAGILIRSLGGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAA-LAAALAVPLAQHSG 162 (395)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHH-HHhhhhhHHHHhhc
Confidence 666777765433344578899999999999999999999999999 7777777766554444432 33223333333332
Q ss_pred CCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 505 SGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 505 ~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
.++.++...+.++++++++++.-.
T Consensus 163 -----------gW~~aL~~WAl~allAl~~WlPq~ 186 (395)
T COG2807 163 -----------GWRGALGFWALLALLALLIWLPQA 186 (395)
T ss_pred -----------cHHHHHHHHHHHHHHHHHHHhhhc
Confidence 399999999999999998776554
No 214
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.64 E-value=0.00048 Score=60.41 Aligned_cols=97 Identities=18% Similarity=0.144 Sum_probs=75.9
Q ss_pred hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhH
Q 008597 64 GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNV 143 (560)
Q Consensus 64 ~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~ 143 (560)
+++.|.+.||+| +|....++.....++....... + +.+.+....++.|.+.+..+....
T Consensus 15 ~~~~g~~~d~~g--------------~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~ 73 (141)
T TIGR00880 15 SPLSGLLTDRFG--------------RKPVLLVGLFIFVLSTAMFALS-----S--NITVLIIARFLQGFGAAFALVAGA 73 (141)
T ss_pred HhhHHHHHhhcc--------------hhHHHHHHHHHHHHHHHHHHHh-----c--cHHHHHHHHHHHHHHHHHHHHhHH
Confidence 667888888876 8888999988888887764322 2 355666677888888888888877
Q ss_pred HHHhhhcc-CCCcceeeehhhhhhhhHHHHHHHHHHhcC
Q 008597 144 VTGVMNFG-DYGGTIVGIMKGFLGLGGAALIQAYDTIWK 181 (560)
Q Consensus 144 ~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f~ 181 (560)
....+.+| ++||.+.|+......++..+...+...+.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 74 ALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred HHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 88889998 469999999999999999888777666654
No 215
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.60 E-value=0.00064 Score=77.73 Aligned_cols=151 Identities=21% Similarity=0.286 Sum_probs=114.4
Q ss_pred HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-Cc--------chHHH
Q 008597 374 ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG-FP--------GNLYV 444 (560)
Q Consensus 374 ~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~-~~--------~~l~~ 444 (560)
..+|.++.++..++..+.-...+--++.|+++|++. +|..++.+..++..+++.++..+ .+ ..+++
T Consensus 16 ~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~l-----G~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~ 90 (654)
T TIGR00926 16 NFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWL-----GKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLL 90 (654)
T ss_pred HHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHH
Confidence 347888888888888888888899999999999986 55566666777777777665432 11 12556
Q ss_pred HHHHHHhhhhccccchhhHHHHhccCCc---hhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccC-ccccHHH
Q 008597 445 GSIIVGVCYGCQWSLMPTITYEIFGVGH---MGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG-THCFMLS 520 (560)
Q Consensus 445 ~~~l~G~~~G~~~~l~p~i~~e~FG~k~---~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G-~~cy~~~ 520 (560)
+..++..|.|+.-+...+...|.|..++ +-..|.+-..+.-+|++ +++++.+++.+.. .|.| ..||..+
T Consensus 91 gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSl-is~~i~~~l~~~~------~~fg~~~~~~~a 163 (654)
T TIGR00926 91 GLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSL-ISTIITPILRGDV------GCFGCQDCYPLA 163 (654)
T ss_pred HHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhh------cccccCcchHHH
Confidence 7788888999999999999999998543 66677777777888884 6777788876543 2444 4589999
Q ss_pred HHHHHHHHHHHHHHHH
Q 008597 521 FLIMASVAFVGCLVAF 536 (560)
Q Consensus 521 f~i~~~l~~la~vl~l 536 (560)
|.+.+++.++++++-+
T Consensus 164 F~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 164 FGVPAILMILALIVFM 179 (654)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998888876544
No 216
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.59 E-value=0.00036 Score=74.12 Aligned_cols=156 Identities=14% Similarity=0.039 Sum_probs=91.4
Q ss_pred hhhcHHHHHHHcCCCCcchhHH--HHHHHHhhhhhcccc-ccchhhhhhhcCCCchHHHHHHHHHHHHHHH--H-Hhhc-
Q 008597 365 TVNNISQIGESLGYPTSAINSL--VSLWSIWNFLGRFGG-GYVSDIVLHRMGWERPSFIAITLATMSVGHI--V-VASG- 437 (560)
Q Consensus 365 ~i~~~~~i~~~lG~~~~~aa~l--vSl~si~n~~GRl~~-G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l--l-l~~~- 437 (560)
...-+|.+.++.|.+.++.+.+ +++..+...+.-.++ ++.+||.++ .|.|.+.+ ..+.+.... . +...
T Consensus 20 ~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~----r~~~i~~~-~~~~~~~~~~~~~~~~~~ 94 (390)
T TIGR02718 20 AMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGR----RRSWVLPM-QCLVSACLASLALVGPDV 94 (390)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCc----chhHHHHH-HHHHHHHHHHHHcCCcch
Confidence 3456778889999998877765 355566654444444 445666543 33343332 222121111 1 1111
Q ss_pred Cc-chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccc
Q 008597 438 FP-GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 516 (560)
Q Consensus 438 ~~-~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~c 516 (560)
.. ..+.....+.+++....-...-.++.|....|+++..-+....+..+|. ++++...+.+.|..+
T Consensus 95 ~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~-~~g~~~~~~l~~~~g------------ 161 (390)
T TIGR02718 95 AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGF-FGGGAGTLVLFGKFG------------ 161 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHhC------------
Confidence 11 1222233334455555555555567787777777765555555556666 467777888998876
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH
Q 008597 517 FMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 517 y~~~f~i~~~l~~la~vl~l~l 538 (560)
++.+|++.+++.++..+..+++
T Consensus 162 w~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 162 QRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 8999999999887776665443
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=97.59 E-value=0.00077 Score=73.17 Aligned_cols=159 Identities=11% Similarity=0.094 Sum_probs=95.8
Q ss_pred cHHHHH-HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH-HhhcC---c---
Q 008597 368 NISQIG-ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV-VASGF---P--- 439 (560)
Q Consensus 368 ~~~~i~-~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~ll-l~~~~---~--- 439 (560)
.+..++ +.+|+++..++.++++..+++++.-++.|+++||...|++..|+|.+.. ....+++..+ +..+. .
T Consensus 31 ~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~-~~~~~i~~~l~f~~p~~~~~~~~ 109 (444)
T PRK09669 31 FLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWF-AIPFGVVCLLTFYTPDFGATGKI 109 (444)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHH-HHHHHHHHHHHHhCCCCCcchHH
Confidence 344444 4579999999999999999999999999999999987777566766533 2333333322 22211 1
Q ss_pred chHHHHHHHHHhhhhccccchhhHHHHhc-cCCchhhhhhHH----HhhhhhHHhhhhhhhhhhhcccccCCCCCcccCc
Q 008597 440 GNLYVGSIIVGVCYGCQWSLMPTITYEIF-GVGHMGTIFNTI----AIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGT 514 (560)
Q Consensus 440 ~~l~~~~~l~G~~~G~~~~l~p~i~~e~F-G~k~~g~~yG~~----~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~ 514 (560)
..+++..++.+.+|.....-+-++.+|+. ..+++....++- .++..+++. +..++...+-+.. ..
T Consensus 110 ~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~-~~~pl~~~~~~~~---------~~ 179 (444)
T PRK09669 110 IYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSV-IALPLVDILGKGD---------EQ 179 (444)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhCCCc---------hh
Confidence 12333445667777766666667777776 335566554444 333444443 2223443332110 01
Q ss_pred cccHHHHHHHHHHHHHHHHHHHH
Q 008597 515 HCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 515 ~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
..|+..+.+.++++++..+++.+
T Consensus 180 ~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 180 KGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhC
Confidence 35888888888777666655443
No 218
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.56 E-value=0.00048 Score=74.31 Aligned_cols=129 Identities=16% Similarity=0.189 Sum_probs=87.8
Q ss_pred HHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHH
Q 008597 351 LFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVG 430 (560)
Q Consensus 351 l~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~ 430 (560)
+.+..+...|+ +...++.+.++.|++..+.+.+.++..+...++-++||+++||..+++ ..+.+..++.++.
T Consensus 10 ~~f~~f~~~G~---~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~-----~~l~~~~l~~~~~ 81 (400)
T PF03825_consen 10 MYFLYFFAYGA---FLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAK-----RILALLSLLSALA 81 (400)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH-----HHHHHHHHHHHHH
Confidence 33334444443 334577889999999999999999999999999999999999985332 2333333333443
Q ss_pred HHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH----HhhhhhHHh
Q 008597 431 HIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI----AIASPVGSY 489 (560)
Q Consensus 431 ~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~----~~a~~~g~~ 489 (560)
.++.. .++...+.+..++..+.+.+..++.-+++.+.-+ +.+.+||-+ +++..+++.
T Consensus 82 ~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~ 143 (400)
T PF03825_consen 82 LLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAAL 143 (400)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHH
Confidence 33322 3445556666777888888888888888887765 456666665 555555553
No 219
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.55 E-value=6e-05 Score=81.11 Aligned_cols=70 Identities=16% Similarity=0.100 Sum_probs=50.3
Q ss_pred hcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhc
Q 008597 343 VCTLNFWLLFVAMLCGMGSGLATVNNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRM 412 (560)
Q Consensus 343 lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~ 412 (560)
.|+++||.+-..+++-.++--......+-..++ .|++.++.+.+.|+.+++..+..++.|.++||++.|+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK 74 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKK 74 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCS
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhH
Confidence 478899977666555444322334445555554 7999999999999999999999999999999998654
No 220
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.52 E-value=0.0042 Score=65.67 Aligned_cols=123 Identities=11% Similarity=0.136 Sum_probs=82.1
Q ss_pred HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhh
Q 008597 374 ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVC 452 (560)
Q Consensus 374 ~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~ 452 (560)
+-+|+++.+.+.+.+..++.-++-.+.-.-..|+... +-...+...+.++.=..+++. ...+..+++++.+.-++
T Consensus 290 ~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~----~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~ 365 (451)
T KOG2615|consen 290 GRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKG----NIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFS 365 (451)
T ss_pred CccCCChhhheeeeehhhHHHHHHHHhcccccccccc----chhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHH
Confidence 4568999999998888888887766666666565531 111112222222222222222 23456688888888888
Q ss_pred hhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 453 YGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 453 ~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
-...-+-.-.++...-+....|+.-|+......++= .+||.+.|.+..
T Consensus 366 ~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaR-aiGPlv~g~i~~ 413 (451)
T KOG2615|consen 366 TASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALAR-AIGPLVSGVIFS 413 (451)
T ss_pred HHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHH-HhhhhhhheeEE
Confidence 777777777888899999999999999866666666 377777776654
No 221
>PRK09848 glucuronide transporter; Provisional
Probab=97.50 E-value=0.00076 Score=73.26 Aligned_cols=108 Identities=17% Similarity=0.152 Sum_probs=67.8
Q ss_pred HHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc--C-c--c--hH
Q 008597 371 QIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG--F-P--G--NL 442 (560)
Q Consensus 371 ~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~--~-~--~--~l 442 (560)
.+.+ .+|+++.+++.++++..+++++.-+++|+++||.++|++..|++.+.....+...+.+++... . . . .+
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 3444 459999999999999999999999999999999988777666675544433333333332211 1 1 1 12
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccC-Cchhhhhh
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFN 478 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~-k~~g~~yG 478 (560)
++..++.+++++.....+-++..++--. ++.....+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~ 149 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGA 149 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHH
Confidence 3345667777877665444444444333 34444433
No 222
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.43 E-value=0.0012 Score=72.63 Aligned_cols=179 Identities=15% Similarity=0.085 Sum_probs=108.4
Q ss_pred cChhHHHHHHHHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHH
Q 008597 344 CTLNFWLLFVAMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAI 422 (560)
Q Consensus 344 kt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~ 422 (560)
.++...++...++.-...+ ....-+.++.+ ++|+++++.+.+.++.++--.+ +.+||.++|++. ..+..|++.+.+
T Consensus 24 ~~~~~~~~~~~y~~qGl~~-l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~-i~G~rRr~~l~~ 100 (468)
T TIGR00788 24 PRVVLAIGLQVLFVKGIAG-LMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFP-LFGYTKRWYLVL 100 (468)
T ss_pred cchHHHHHHHHHHHhhHHH-HhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcC-CCCccchHHHHH
Confidence 3444455554444333333 33445555655 6799999988888998888877 555999999994 233345666555
Q ss_pred HHHHH-HHHHHHHhh-cCcchHH-HHHHHHHhhhhccccchhhHHHHhccCCchhh---hhhHHHhhhhhHHhhhhhhhh
Q 008597 423 TLATM-SVGHIVVAS-GFPGNLY-VGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT---IFNTIAIASPVGSYVCSVRII 496 (560)
Q Consensus 423 ~~~l~-~~~~lll~~-~~~~~l~-~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~---~yG~~~~a~~~g~~ll~~~l~ 496 (560)
...+. +++...+.. ++...+. +...+.+++.+..-...=.++.|... ++.+. +..+......+|. ++++.+.
T Consensus 101 ~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~-~vg~~l~ 178 (468)
T TIGR00788 101 SGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGG-LISSLLG 178 (468)
T ss_pred HHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHH-HHHHHHH
Confidence 54444 233322322 1212233 35677888888888888889999887 43332 2222221122343 3455568
Q ss_pred hhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHH
Q 008597 497 GYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 497 G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~ 539 (560)
|.+.|..+ ++..|.+++++.++..+...+++
T Consensus 179 G~l~~~~~------------~~~~f~~~a~l~ll~~~~~~~~~ 209 (468)
T TIGR00788 179 GPLLDKTL------------TRILFLITAALLLLQLFVSNLSK 209 (468)
T ss_pred HHHHHhcC------------cchHHHHHHHHHHHHHHHHHhcc
Confidence 88888765 78899999888777754444443
No 223
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.32 E-value=0.00056 Score=72.08 Aligned_cols=124 Identities=17% Similarity=0.177 Sum_probs=91.9
Q ss_pred HHHHHHcCCCCc----chhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCc-chHHH
Q 008597 370 SQIGESLGYPTS----AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFP-GNLYV 444 (560)
Q Consensus 370 ~~i~~~lG~~~~----~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~-~~l~~ 444 (560)
.++.++.|.++. -++.+=|.+++..++.-..||-+||+.+| +..+.+..+..++..++.+.+.. ..+.+
T Consensus 53 ~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGR------kpvll~c~~~va~s~ll~~~S~~F~afv~ 126 (451)
T KOG2615|consen 53 RDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGR------KPVLLACLIGVALSYLLWALSRNFAAFVL 126 (451)
T ss_pred HHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455565542 35667789999999999999999999964 34444444555566655554332 23444
Q ss_pred HHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 445 GSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 445 ~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
+=++.|+..|- .++.-++++|++-.|+.+...+.+.++..+|- ++||++.|++-.
T Consensus 127 aR~l~Gi~kgn-l~v~rAiisdV~sek~r~l~ms~v~~a~~lGf-ilGPmIGgyla~ 181 (451)
T KOG2615|consen 127 ARFLGGIFKGN-LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGF-ILGPMIGGYLAQ 181 (451)
T ss_pred HHHhhhhccCc-hHHHHHHHHhhcChhhccceeeeeehhhhcch-hhcchhhhHHHh
Confidence 46777877774 77888999999999999999999999999998 589999998877
No 224
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.31 E-value=0.00066 Score=73.34 Aligned_cols=165 Identities=19% Similarity=0.223 Sum_probs=108.8
Q ss_pred cHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCc-------
Q 008597 368 NISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFP------- 439 (560)
Q Consensus 368 ~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~------- 439 (560)
.+.+++++ +|+++..++.+..+..++|++--++.|++|||...|++..|++.+ +...+.+++..++....|
T Consensus 23 ~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l-~g~i~~~~~~~llf~~~p~~~~~~~ 101 (428)
T PF13347_consen 23 YLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWIL-IGAILLALSFFLLFSPPPAGLSFTA 101 (428)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEee-hhhHHHHHHHHHhhccccchhhhhh
Confidence 44455544 599999899999999999999999999999987777665555554 444555555544332211
Q ss_pred --chHHHHHHHHHhhhhccccchhhHHHHhcc-CCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccc
Q 008597 440 --GNLYVGSIIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHC 516 (560)
Q Consensus 440 --~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG-~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~c 516 (560)
..+.+..+++.+++-....-+-++.+|+.. .+++....+.-.....+|.. +...+.+.+.+..++.+. ...
T Consensus 102 ~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~-l~~~~~~~l~~~~g~~~~-----~~~ 175 (428)
T PF13347_consen 102 KLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSL-LASFLAPILVSWFGGGDT-----SNG 175 (428)
T ss_pred HHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHH-HHHHHhhhhhhhhccCcc-----chH
Confidence 113445566677777777766777777776 45778888887777777774 333456666665553211 024
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH
Q 008597 517 FMLSFLIMASVAFVGCLVAFLLF 539 (560)
Q Consensus 517 y~~~f~i~~~l~~la~vl~l~l~ 539 (560)
|+....+.+++++++.+++....
T Consensus 176 ~~~~~~v~~iv~~v~~~i~~~~~ 198 (428)
T PF13347_consen 176 YRWMALVLAIVGLVFFLITFFFV 198 (428)
T ss_pred HHHHHHHHHHHHHHHhhhhhhee
Confidence 88888888877777665554443
No 225
>PRK10429 melibiose:sodium symporter; Provisional
Probab=97.28 E-value=0.003 Score=69.38 Aligned_cols=120 Identities=13% Similarity=0.078 Sum_probs=77.1
Q ss_pred hcHHHHHHH-cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-c--Ccc--
Q 008597 367 NNISQIGES-LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-G--FPG-- 440 (560)
Q Consensus 367 ~~~~~i~~~-lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~--~~~-- 440 (560)
..+..++++ +|+++..++.+.++..+++++.-+++|+++||...|++..|+|.+. .....++++.++.. + ...
T Consensus 27 ~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~-g~i~~~i~~~llf~~p~~~~~~~ 105 (473)
T PRK10429 27 MYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILI-GTLANSVVLFLLFSAHLFEGTAQ 105 (473)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhh-hhHHHHHHHHHHHcCCCCCccHH
Confidence 344555544 5999999999999999999999999999999887676655677654 33444555433322 1 111
Q ss_pred --hHHHHHHHHHhhhhccccchhhHHHHhc-cCCchhhhhhHHHhhhhhH
Q 008597 441 --NLYVGSIIVGVCYGCQWSLMPTITYEIF-GVGHMGTIFNTIAIASPVG 487 (560)
Q Consensus 441 --~l~~~~~l~G~~~G~~~~l~p~i~~e~F-G~k~~g~~yG~~~~a~~~g 487 (560)
.+.+..++.+++|.....-+-++.+|+- ..++.....++......+|
T Consensus 106 ~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig 155 (473)
T PRK10429 106 YVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLA 155 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 1233345566677666655666667766 4677777777743333333
No 226
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.07 E-value=0.012 Score=67.36 Aligned_cols=73 Identities=18% Similarity=0.136 Sum_probs=60.2
Q ss_pred CcHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHHhh-hhhccccccchhhhh
Q 008597 337 MNILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWN-FLGRFGGGYVSDIVL 409 (560)
Q Consensus 337 ~t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n-~~GRl~~G~lsD~~~ 409 (560)
.+.++.++||.|-+..++-.+-...-..++..+|.+.|.+ |.++..|..+...+++.. ++|-+++|++.-|+.
T Consensus 383 ~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 383 KSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 4689999999999888887777776667788999999865 999999999887777764 589999999877663
No 227
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=96.97 E-value=0.0073 Score=62.72 Aligned_cols=121 Identities=12% Similarity=0.057 Sum_probs=82.3
Q ss_pred HHHHh--hcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHh
Q 008597 37 STLKS--SQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVV 113 (560)
Q Consensus 37 ~~l~~--~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~ 113 (560)
..+++ .+|++.++....-.....+..+ .+..+.+.||++ +|+.+.++.++..++..+.+.. .
T Consensus 165 ~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g--------------~~~~l~~~~~l~~~~~~l~~~~-~ 229 (310)
T TIGR01272 165 NFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMIS--------------QGRYLAFNAFLAVLLSIGAALT-H 229 (310)
T ss_pred HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------HHHHHHHHHHHHHHHHHHHHHc-C
Confidence 44543 3688887777554444444444 456777777775 8888888888888877654321 1
Q ss_pred ccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHHHHHHHHHhc
Q 008597 114 GLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTIW 180 (560)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i~s~i~~~~f 180 (560)
+ .+... -.++.|.+.+..|........+.+|++.|.++++. +...+|+++...+.-.+.
T Consensus 230 ~------~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 230 G------YVAMW-FVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred C------HHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 1 11111 22356789999999999999999999999999986 556688888876655443
No 228
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.93 E-value=3.9e-05 Score=82.96 Aligned_cols=136 Identities=20% Similarity=0.245 Sum_probs=97.4
Q ss_pred hhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-c---CcchHHHHHHHHHhhhhcccc
Q 008597 383 INSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-G---FPGNLYVGSIIVGVCYGCQWS 458 (560)
Q Consensus 383 aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~---~~~~l~~~~~l~G~~~G~~~~ 458 (560)
.+...+...++..+|-++.|+++||++|| ..+.+...+..++.++... + ++..+.++-++.|++.|+...
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~ 121 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRK------PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYV 121 (451)
T ss_pred HHHHHHHHHhhhccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccc
Confidence 45678999999999999999999999754 3445555566666655443 3 456778888999999999999
Q ss_pred chhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhc-ccccCCCCCcccCccccHHHHHHHHHHHHHHHHHH
Q 008597 459 LMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIY-DNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVA 535 (560)
Q Consensus 459 l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iy-D~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~ 535 (560)
+.|..+.|.-..|+.+..-.+..++..+|.. ++. +.+... +... ..-||..+.+.+..+++..+..
T Consensus 122 ~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~-~~~-~~~~~~~~~~~---------~~~Wr~~~~~~~~~~l~~~~~~ 188 (451)
T PF00083_consen 122 VSPIYISEIAPPKHRGFLSSLFQLFWALGIL-LAS-LIGYIVSYYSD---------NWGWRILLIFGAIPSLLVLLLR 188 (451)
T ss_pred ccccccccccccccccccccccccccccccc-ccc-ccccccccccc---------cccccccccccccccccccccc
Confidence 9999999999999999888888777777763 332 222222 1110 1237777777777765554443
No 229
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.92 E-value=0.064 Score=59.05 Aligned_cols=86 Identities=13% Similarity=0.206 Sum_probs=63.6
Q ss_pred HHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHH
Q 008597 446 SIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMA 525 (560)
Q Consensus 446 ~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~ 525 (560)
.+.+|.++=..-....++-+++.|+++.++.-|++..+.-.+.+ .+|.+.-.+|...| |+..+.+..
T Consensus 395 i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~-~~~~~~t~~~~~~g------------~~~v~~~~~ 461 (488)
T KOG2325|consen 395 IVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARV-VGPIFSTAIFTLSG------------PRPVWIILL 461 (488)
T ss_pred hheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhh-hhHHHHhhhHHhcC------------ccHHHHHHH
Confidence 34455555555556778899999999999999999776666663 66666777888776 888888888
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 008597 526 SVAFVGCLVAFLLFIRTRR 544 (560)
Q Consensus 526 ~l~~la~vl~l~l~~r~r~ 544 (560)
+..+....++.+..+|-+.
T Consensus 462 ~~~l~~~~l~~~~~~r~~~ 480 (488)
T KOG2325|consen 462 CLLLVVAALWIVFLKRLVP 480 (488)
T ss_pred HHHHHHHHHHHHHHHhccc
Confidence 8777777666666555444
No 230
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.81 E-value=0.11 Score=56.01 Aligned_cols=155 Identities=10% Similarity=0.037 Sum_probs=85.6
Q ss_pred HHHHhcCh--hHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCC---cchhHHHHHHHHhhhhhccccccchhhhhhhcC
Q 008597 339 ILQSVCTL--NFWLLFVAMLCGMGSGLATVNNISQIGESLGYPT---SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMG 413 (560)
Q Consensus 339 ~~~~lkt~--~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~---~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~ 413 (560)
++++.++| ..|-+|+++..+.. ..++|..-...++..-++ .--+..-++..+.++++-+..|++..++.+
T Consensus 240 ~~~~y~~~~ll~WSlWWa~atcgy--~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~--- 314 (412)
T PF01770_consen 240 FKSCYSNPRLLLWSLWWAFATCGY--YQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDR--- 314 (412)
T ss_pred HHHHhcCchHHHHHHHHHHHHhHH--HHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHH---
Confidence 45666666 46778887755432 123333333444441111 112344466777777888888888444421
Q ss_pred CCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhh
Q 008597 414 WERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCS 492 (560)
Q Consensus 414 ~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~ 492 (560)
-....+.+...+.+..+++.. .++.+.-+++-++++..|-....+.-.=++...-.+.+|-.+|+-.+ -+.++-
T Consensus 315 -~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf----~Al~LQ 389 (412)
T PF01770_consen 315 -WGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTF----VALVLQ 389 (412)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHH----HHHHHH
Confidence 112333333344444444443 34446677788888888887776666666766667777777777533 222333
Q ss_pred hhhhhhhcccc
Q 008597 493 VRIIGYIYDNV 503 (560)
Q Consensus 493 ~~l~G~iyD~~ 503 (560)
..+---+.|..
T Consensus 390 tilT~iV~d~~ 400 (412)
T PF01770_consen 390 TILTLIVVDKR 400 (412)
T ss_pred HheEEEEEcCc
Confidence 34444555643
No 231
>PRK11462 putative transporter; Provisional
Probab=96.81 E-value=0.018 Score=63.10 Aligned_cols=114 Identities=10% Similarity=0.030 Sum_probs=72.8
Q ss_pred HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hc--Cc----chHHHHH
Q 008597 374 ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SG--FP----GNLYVGS 446 (560)
Q Consensus 374 ~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~--~~----~~l~~~~ 446 (560)
+.+|+++..++++..+.-+++++-=++.|+++||...|++..|+|.+..+ ..++++..++. .+ +. ..+.+..
T Consensus 38 ~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~-i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 38 DIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGA-LPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred HhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHH-HHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 44699999999999999999999999999999999888887778876543 33344443332 21 11 1133344
Q ss_pred HHHHhhhhccccchhhHHHHhcc-CCchhhhhhHHHhhhhhHH
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFG-VGHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG-~k~~g~~yG~~~~a~~~g~ 488 (560)
++...+|-..-.-+-++.+|+-- .++.++..++-..+..+|.
T Consensus 117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~ 159 (460)
T PRK11462 117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGG 159 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 55566665544444444444433 5677777776655555444
No 232
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=96.66 E-value=0.013 Score=59.16 Aligned_cols=123 Identities=16% Similarity=0.096 Sum_probs=76.1
Q ss_pred hhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--h-cC-
Q 008597 363 LATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA--S-GF- 438 (560)
Q Consensus 363 l~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~--~-~~- 438 (560)
..+-...+++-+.+|++.++.+.+-..-.++..+| +..|.+.|+.+ || ..+.+......++..+.. . +.
T Consensus 19 Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~g-----p~-~~l~iG~~~~~~GY~~~~l~~~~~i 91 (250)
T PF06813_consen 19 YTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFG-----PW-VVLLIGAVLGFVGYGLLWLAVSGRI 91 (250)
T ss_pred cchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcc-----hH-HHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 33444557788889999999888888888888887 88999999985 33 334455566666665432 1 11
Q ss_pred ---c-chHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhh
Q 008597 439 ---P-GNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSV 493 (560)
Q Consensus 439 ---~-~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~ 493 (560)
+ +.+.+...+.|.+-+......-....+.|. +|+|+.-|++-...++++.++..
T Consensus 92 ~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~ 149 (250)
T PF06813_consen 92 PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQ 149 (250)
T ss_pred CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHH
Confidence 1 122222333333322222222333457785 79999999996666666655543
No 233
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.62 E-value=0.037 Score=60.64 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=78.9
Q ss_pred cHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcC----c--c
Q 008597 368 NISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGF----P--G 440 (560)
Q Consensus 368 ~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~----~--~ 440 (560)
.+..++. ..|+++..++++..+--+++++.=++.|+++||...|++.-|||.+..+..+..+..+++..+. . .
T Consensus 34 yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ 113 (467)
T COG2211 34 YLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLI 113 (467)
T ss_pred HHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchH
Confidence 3334444 4599999999999999999999999999999999988988888887665555444444433221 1 1
Q ss_pred hHHHHHHHHHhhhhcc----ccchhhHHHHhccCCchhhhhhHHHhhhhhHH
Q 008597 441 NLYVGSIIVGVCYGCQ----WSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 441 ~l~~~~~l~G~~~G~~----~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~ 488 (560)
..++.-++.+++|-.. .++.|.++.| .+++.+..++=.....+|.
T Consensus 114 ya~vtY~l~~l~YT~vniPy~al~~~iT~d---~~ER~~l~s~R~~~~~~g~ 162 (467)
T COG2211 114 YALVTYMLLGLGYTLVNIPYGALGPEITQD---PQERASLTSWRMVFASLGG 162 (467)
T ss_pred HHHHHHHHHHHHHHheeCchhhcchhhcCC---HHHHHHHHHHHHHHHHHHH
Confidence 2344567777777654 4556666655 3455556665544444443
No 234
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.57 E-value=0.091 Score=57.87 Aligned_cols=123 Identities=15% Similarity=0.209 Sum_probs=85.4
Q ss_pred cCCCCcchhHHHHHHHHhhhhhccccc-cchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc-CcchHHHHHHHHHhhh
Q 008597 376 LGYPTSAINSLVSLWSIWNFLGRFGGG-YVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG-FPGNLYVGSIIVGVCY 453 (560)
Q Consensus 376 lG~~~~~aa~lvSl~si~n~~GRl~~G-~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~-~~~~l~~~~~l~G~~~ 453 (560)
.|.++++.+.+.++.++.+..+-++.. .++-.++. . +.+.+.+....+..+++++. .++..+...+. ....
T Consensus 272 f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~----~--~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~-~~~~ 344 (463)
T KOG2816|consen 272 FGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGE----K--RLISLGLLSEFLQLLLFAFATETWMMFAAGVV-VALA 344 (463)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----h--hHhhHHHHHHHHHHHHHHHhccchhhhHHHHH-HHhh
Confidence 467777888888888888888888877 55444432 2 24455556666666666543 34444544444 4444
Q ss_pred hccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCC
Q 008597 454 GCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASG 506 (560)
Q Consensus 454 G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~ 506 (560)
+.....+-++++.+-+.++.|++++++.....+.+. +++.+++.+|-.+.+.
T Consensus 345 ~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~-~~~~~~~~i~~~t~~~ 396 (463)
T KOG2816|consen 345 GIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGV-VSPALYGNIFALTLDD 396 (463)
T ss_pred cchhHHHHhHHHhhcccccccchhhHHHHHHHHhhh-hhHHHHHHHHHHHHHh
Confidence 556777788889999999999999999887777774 6777888887665543
No 235
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.41 E-value=0.023 Score=60.84 Aligned_cols=162 Identities=16% Similarity=0.137 Sum_probs=100.0
Q ss_pred HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHH-------HHhh---c--Cc
Q 008597 372 IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHI-------VVAS---G--FP 439 (560)
Q Consensus 372 i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~l-------ll~~---~--~~ 439 (560)
+..+++.++.-.+.++++--...- -|..+|..||+...-.+..|.-.+.....+.+.+.. .+.. . .+
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 345788887777778887776665 599999999997533444454444333333333322 2222 0 01
Q ss_pred c-----hHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCc
Q 008597 440 G-----NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGT 514 (560)
Q Consensus 440 ~-----~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~ 514 (560)
. ...+...++|++.+..-...-++.+|.-.+|+.++.-+++..--.+|- +.+..++|.+.|...
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~-iv~ai~~g~lL~~~s---------- 153 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGI-IVSAIVFGRLLDPFS---------- 153 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHH-HHHHHHHHHHccccC----------
Confidence 1 233456777888888888888999999999999998888855444444 355567888777653
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 008597 515 HCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYK 547 (560)
Q Consensus 515 ~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~ 547 (560)
...-.-+.....+++.++.++-.++..+.++
T Consensus 154 --~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~ 184 (403)
T PF03209_consen 154 --PERLIQVIQGVALIALLLNLIALWGQEPRRS 184 (403)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 2333344444555555555555555443333
No 236
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.29 E-value=0.02 Score=63.16 Aligned_cols=137 Identities=16% Similarity=0.194 Sum_probs=90.9
Q ss_pred hHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHH--H--hhcCcchHHHHHHHHHhhhhccccc
Q 008597 384 NSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIV--V--ASGFPGNLYVGSIIVGVCYGCQWSL 459 (560)
Q Consensus 384 a~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~ll--l--~~~~~~~l~~~~~l~G~~~G~~~~l 459 (560)
+..||++.+++++|-+..|+++|++||| ..+.+..++..++.++ + ..+.+..+.++-++.|++.|...+.
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK------~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~ 136 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRK------NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGL 136 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcch------HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHH
Confidence 5689999999999999999999999755 3333333333333222 1 1355567888999999999999999
Q ss_pred hhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhh-hhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHH
Q 008597 460 MPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG-YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 460 ~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G-~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
.|..+.|.=..+.+|..=-+..++..+|-. ++..+.- .+.+.+ +-|...+....+.+++..++..++
T Consensus 137 ~pmyl~E~sP~~~RG~~g~~~~~~~~~g~l-l~~~~~l~~ilGt~-----------~~W~~l~~~~~i~~~~~l~~l~~~ 204 (485)
T KOG0569|consen 137 VPMYLTEISPKNLRGALGTLLQIGVVIGIL-LGQVLGLPSLLGTE-----------DLWPYLLAFPLIPALLQLALLPFL 204 (485)
T ss_pred HHHHHhhcChhhhccHHHHHHHHHHHHHHH-HHHHHccHHhcCCC-----------cchHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999988888665555555555553 3321111 222222 126666666666666666554443
No 237
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=96.24 E-value=0.023 Score=61.62 Aligned_cols=95 Identities=15% Similarity=0.160 Sum_probs=67.2
Q ss_pred chhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh----hcCc----chHHHHHHHHHhhh
Q 008597 382 AINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA----SGFP----GNLYVGSIIVGVCY 453 (560)
Q Consensus 382 ~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~----~~~~----~~l~~~~~l~G~~~ 453 (560)
..+..-..-.+.|.+|.++.||+.|+++||+. +...+++++++..+.. .+.+ ..+...=.+.|++-
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v------YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGI 158 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDKFGRKKV------YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGI 158 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh------hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccc
Confidence 33444457788999999999999999987764 3333344444433222 1223 23444568899999
Q ss_pred hccccchhhHHHHhccCCchhhhhhHHHh
Q 008597 454 GCQWSLMPTITYEIFGVGHMGTIFNTIAI 482 (560)
Q Consensus 454 G~~~~l~p~i~~e~FG~k~~g~~yG~~~~ 482 (560)
|+=+++..++++|.=-.|..|+--+.++.
T Consensus 159 GGDYPlSAtI~SE~an~~~RGa~iaavFa 187 (538)
T KOG0252|consen 159 GGDYPLSATIMSESANKKTRGAFIAAVFA 187 (538)
T ss_pred cCCCcchHHHhhhhhhhccccceeEEEEE
Confidence 99999999999999988888877776643
No 238
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.94 E-value=1.8 Score=47.61 Aligned_cols=92 Identities=11% Similarity=-0.068 Sum_probs=61.5
Q ss_pred HHHhhhhhhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcc
Q 008597 55 VFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHS 134 (560)
Q Consensus 55 ~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g 134 (560)
+.........++++.++|+.+ ||+.+.+|+..+..=...+ -. .+ + +.+.+-+++.|.|
T Consensus 58 iiY~~ftv~~l~~psiv~~i~--------------~K~~lv~ga~~y~~f~~gf----l~--~N-~-y~~yfssallG~G 115 (461)
T KOG3098|consen 58 IIYAFFTVSCLFAPSIVNFLG--------------PKWALVIGATCYAAFPLGF----LF--PN-S-YYLYFSSALLGFG 115 (461)
T ss_pred HHHHHHHHHHHhhHHHHHHhh--------------HHHHHHHHhHHHHHHHHHH----Hh--cc-h-HHHHHHHHHhhhh
Confidence 333344445788899999987 9999999987755433321 11 11 2 3455567888999
Q ss_pred cchhhhhhHHHHhhhccC-CCcceeeehhhhhhhh
Q 008597 135 QTFFNTGNVVTGVMNFGD-YGGTIVGIMKGFLGLG 168 (560)
Q Consensus 135 ~~~~~~~~~~t~~~~Fp~-~RG~a~Gi~~~~~GLs 168 (560)
-++.+++-=.-...|.++ ++..-+++.-+.+-.|
T Consensus 116 aallw~GqG~ylt~~st~~tie~Nisi~Wai~~~~ 150 (461)
T KOG3098|consen 116 AALLWTGQGGYLTSNSTRETIERNISIFWAIGQSS 150 (461)
T ss_pred HHheecccceehhhcCChhhHHHHHHHHHHHHHHH
Confidence 998888888888888864 5777777755544433
No 239
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.91 E-value=0.43 Score=52.24 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHHHHHH
Q 008597 121 VPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQA 175 (560)
Q Consensus 121 ~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i~s~i 175 (560)
++..++..++.|.+++... .++...+..||++ -++-..+|-|++|.+-+.+
T Consensus 106 f~~~~~~v~~~g~~~~~~q-~s~~gla~~fp~~---~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQ-GSLFGLAGVFPST---YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHhhhhhhc-ccchhhcccCCHH---HHHHHHhcchhHHHHHHHH
Confidence 5566666677777765544 4555666688954 3556677777777776543
No 240
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=95.72 E-value=0.87 Score=48.19 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=61.4
Q ss_pred cccccccccHHHHhhcCCChhhhhHHHHHHhhhhh-hhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHH
Q 008597 28 ATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGAN-VGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYF 106 (560)
Q Consensus 28 ~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~-~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~ 106 (560)
..|.|.+| +++|++..|+..+=.++..... +|.+.|.+.||+| +|...++-+++..++-+
T Consensus 54 GpY~Y~LY-----~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~G--------------rk~~cl~~cily~~scl 114 (354)
T PF05631_consen 54 GPYLYALY-----ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYG--------------RKKACLLFCILYSLSCL 114 (354)
T ss_pred cchhHHHH-----HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------chHHHHHHHHHHHHHHH
Confidence 45777666 4699999999966666655554 5999999999987 77788887777777766
Q ss_pred HHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhh
Q 008597 107 LMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTG 141 (560)
Q Consensus 107 ~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~ 141 (560)
. ...+ .++.+.+=-+++|++++..+++
T Consensus 115 ~------k~~~--~~~~L~~GRvlgGiaTSLLfS~ 141 (354)
T PF05631_consen 115 T------KHSS--NYPVLLLGRVLGGIATSLLFSA 141 (354)
T ss_pred H------Hhcc--ccHHHHHHHHHHHHHHHHHHHH
Confidence 4 3333 2444554458888888766664
No 241
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.63 E-value=0.24 Score=48.02 Aligned_cols=145 Identities=16% Similarity=0.210 Sum_probs=92.8
Q ss_pred cHHHHHHHcCCCC--cchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcC--cchH
Q 008597 368 NISQIGESLGYPT--SAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGF--PGNL 442 (560)
Q Consensus 368 ~~~~i~~~lG~~~--~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~--~~~l 442 (560)
..+.+..+.+.+. ...+...+...+...++.+.+|.++||.++| ..+........++.++.. ... ...+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR------KVLIIGLLLFLLGTLLLALAPNVGLALL 97 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch------HHHHHHHHHHHHHHHHHHhCccchHHHH
Confidence 4444555555544 3567788899999999999999999998543 222222222223322222 222 3445
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccC-CchhhhhhHHHh-hhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHH
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAI-ASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLS 520 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~-k~~g~~yG~~~~-a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~ 520 (560)
.+.....|++.|........++.|.+.. ++.+...+.... ...+|. ++++.+.+.+.+. . ...|+..
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~---------~~~~~~~ 166 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGL-ALGPLLAGLLLGA-L---------LWGWRAA 166 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-H---------hcchHHH
Confidence 5566668999999999999999999887 678888888766 344555 4666666777665 1 2347776
Q ss_pred HHHHHHHHH
Q 008597 521 FLIMASVAF 529 (560)
Q Consensus 521 f~i~~~l~~ 529 (560)
|.+......
T Consensus 167 ~~~~~~~~~ 175 (338)
T COG0477 167 FLLAALLGL 175 (338)
T ss_pred HHHHHHHHH
Confidence 666555443
No 242
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.33 E-value=0.11 Score=56.55 Aligned_cols=154 Identities=20% Similarity=0.224 Sum_probs=89.0
Q ss_pred HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh---h--cCcchHHHHH
Q 008597 372 IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA---S--GFPGNLYVGS 446 (560)
Q Consensus 372 i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~---~--~~~~~l~~~~ 446 (560)
+-+++|+++.+...+.++.++ -..-+.++|.+||-+ +-.|..|++.+.+...+..++.+.+. . .+.....+..
T Consensus 16 l~~~l~ls~~~~~~~~~~~~l-Pw~~Kp~~g~lsD~~-pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 93 (433)
T PF03092_consen 16 LKDDLGLSPAQLQRLSSLASL-PWSIKPLYGLLSDSF-PIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLL 93 (433)
T ss_pred HHHHcCCCHHHHHHHHHHHhC-chHHhhhHHhhcccc-cccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHH
Confidence 345689987776665554444 225689999999986 33344566665555555444333322 1 1223334445
Q ss_pred HHHHhhhhccccchhhHHHHhccCC--chhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHH
Q 008597 447 IIVGVCYGCQWSLMPTITYEIFGVG--HMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIM 524 (560)
Q Consensus 447 ~l~G~~~G~~~~l~p~i~~e~FG~k--~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~ 524 (560)
.+..+++...-.+.=+++.|.--.+ ..|..-..+...-.+|++ ++..+.|.+.|..+ ++..|.+.
T Consensus 94 ~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~l-v~~~l~G~l~~~~~------------~~~~f~i~ 160 (433)
T PF03092_consen 94 FLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSL-VGSLLSGPLLDSFG------------PQGVFLIS 160 (433)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHH-HHHHhhhhhhhcCC------------CeEEehHH
Confidence 5556666666666666777765322 222333333333344442 34456788888765 67778888
Q ss_pred HHHHHHHHHHHHHHHh
Q 008597 525 ASVAFVGCLVAFLLFI 540 (560)
Q Consensus 525 ~~l~~la~vl~l~l~~ 540 (560)
+.+..+..+.++.+..
T Consensus 161 ~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 161 AALPLLMLIVALFLLE 176 (433)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 8877777666665554
No 243
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.10 E-value=0.31 Score=52.54 Aligned_cols=143 Identities=10% Similarity=0.046 Sum_probs=98.4
Q ss_pred HHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcHH
Q 008597 14 IATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPWV 92 (560)
Q Consensus 14 ~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~ 92 (560)
+-|++-++.+-...+.-+++ ..--++.+|+++.|+-.++...++.+.. +++.|++-||+| +|.
T Consensus 256 ~FLiA~~~~~DGv~til~~~--~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg--------------~k~ 319 (438)
T COG2270 256 LFLIARFFYIDGVNTILAMG--GVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFG--------------SKP 319 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHH--HHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------Cce
Confidence 34555555554444444443 1223458999999999999999988876 788999988886 888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCC-CcceeeehhhhhhhhHHH
Q 008597 93 VHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDY-GGTIVGIMKGFLGLGGAA 171 (560)
Q Consensus 93 ~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~-RG~a~Gi~~~~~GLsa~i 171 (560)
++.+|.+....--+. +.+.. .+. -+..++.+.|..+|-....+=.--.|+.|+. -|.--|+ -+..|=.+++
T Consensus 320 vl~~~lvi~~~~~~~--~~~~~----~~~-~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFgl-yaltgra~S~ 391 (438)
T COG2270 320 VLMIGLVILSIAALY--LIFLE----GEL-DFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGL-YALTGRAASF 391 (438)
T ss_pred eehHHHHHHHHHHHH--HHHcc----ccH-HHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeeh-hhhhhhHHHH
Confidence 888877665443322 22222 123 5667888888889988888889999999864 5555665 4556666777
Q ss_pred HHHHHHHhc
Q 008597 172 LIQAYDTIW 180 (560)
Q Consensus 172 ~s~i~~~~f 180 (560)
+.+..-+.+
T Consensus 392 ~gp~lv~v~ 400 (438)
T COG2270 392 LGPFLVAVI 400 (438)
T ss_pred HHHHHHHHH
Confidence 777766665
No 244
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=94.93 E-value=0.31 Score=52.21 Aligned_cols=160 Identities=11% Similarity=0.028 Sum_probs=110.6
Q ss_pred HHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh--h--cCcchHHHH
Q 008597 370 SQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA--S--GFPGNLYVG 445 (560)
Q Consensus 370 ~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~--~--~~~~~l~~~ 445 (560)
|+.-+....+..+++..-..+-.+=+.+-+-.|++.+|++.|+ -+.+.+.++++++.++. . .+...+..+
T Consensus 37 p~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~------gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~ 110 (422)
T COG0738 37 PHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA------GIVLGLLLYAVGAALFWPAASSKSYGFFLVA 110 (422)
T ss_pred HHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH------HHHHHHHHHHHHHHHHhhhhhhhhHHHHHHH
Confidence 4444556777777777767777777788888999999987554 35667788888887653 1 233455566
Q ss_pred HHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc----cCC-CCCccc--CccccH
Q 008597 446 SIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV----ASG-EGNSCN--GTHCFM 518 (560)
Q Consensus 446 ~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~----g~~-~~~~C~--G~~cy~ 518 (560)
..+.|.+-|..=+..-+.+..+.-.++-+..-+++.....+|+. .+|.+.+++.++. .+. +.+.=. -....+
T Consensus 111 lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~-~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~ 189 (422)
T COG0738 111 LFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAI-LGPLLGSSLILSGVALTMSAAQILAIKGADASSVQ 189 (422)
T ss_pred HHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHH-HHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhh
Confidence 78889999988888888888888887788888888887888884 7888888887741 000 000000 122478
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008597 519 LSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 519 ~~f~i~~~l~~la~vl~l 536 (560)
.+|.+++..+++-.+...
T Consensus 190 ~pYl~~~~~lvll~v~~~ 207 (422)
T COG0738 190 FPYLILAGLLVLLAVLIL 207 (422)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 888888887766554433
No 245
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.90 E-value=6.9 Score=42.36 Aligned_cols=97 Identities=10% Similarity=0.011 Sum_probs=65.2
Q ss_pred HHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH----hhcCcchHHHHHHHHHhhhhccccch
Q 008597 385 SLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV----ASGFPGNLYVGSIIVGVCYGCQWSLM 460 (560)
Q Consensus 385 ~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll----~~~~~~~l~~~~~l~G~~~G~~~~l~ 460 (560)
++--++-++.+++|--.-++ |+ +|.|.+.+.+.+..+-+++- ..++.+.+++..+..|+.-|+.+.-.
T Consensus 285 ~Y~~~YQ~GVFISRSS~~~~--ri------r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 285 WYQLLYQLGVFISRSSLPFF--RI------RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHhhhhcceeee--eh------hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 45567888889999876554 32 55676665444333322211 12334455566788899999988888
Q ss_pred hhHHHHhccCCchhhhhhHHHhhhhhHHh
Q 008597 461 PTITYEIFGVGHMGTIFNTIAIASPVGSY 489 (560)
Q Consensus 461 p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ 489 (560)
-..+.|..-.++.--.-|...++-.+|-.
T Consensus 357 F~~I~~~~~~~~REFslg~vsvsds~GI~ 385 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVSVSDSLGIL 385 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHhhHHHH
Confidence 88888888888888888888777776663
No 246
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=94.38 E-value=1.2 Score=49.46 Aligned_cols=124 Identities=15% Similarity=0.082 Sum_probs=82.5
Q ss_pred cCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhccccccccccccccCCcH--HHHHHHHHHH-
Q 008597 26 SGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFLRGPW--VVHLTGAILC- 101 (560)
Q Consensus 26 ~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~~Gp~--~~~~~g~~~~- 101 (560)
.|..-..+...--.++.+|++++|+..+.+..++.+.. .+..|++.||+| || .++++..+..
T Consensus 295 dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g--------------~k~~~~l~~~l~~~~ 360 (477)
T PF11700_consen 295 DGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFG--------------PKTKRTLLISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------------CchhHHHHHHHHHHH
Confidence 44444445555566779999999999888888888877 677899999987 55 5555544332
Q ss_pred ---HHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhH
Q 008597 102 ---FAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGG 169 (560)
Q Consensus 102 ---~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa 169 (560)
..|+++++.. .+...+-|.+..++++.|..+|..+..+=+.-.+-=|+.|= +-..+.+++.+
T Consensus 361 ~i~~~g~~G~~~~---~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e---~efFgly~i~g 425 (477)
T PF11700_consen 361 IIPLYGLFGFWPS---FFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE---AEFFGLYAITG 425 (477)
T ss_pred HHHHHHHHHhhhc---ccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh---hHHHHHHHHHH
Confidence 2333332222 21112346788899999999999999988888888886442 44444444443
No 247
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.86 E-value=0.4 Score=52.66 Aligned_cols=156 Identities=18% Similarity=0.249 Sum_probs=107.2
Q ss_pred hchhHHHHHHHHHHHHhcCcccccccccHHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcccccccccccccc
Q 008597 9 LKSKWIATVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFATLNHHHRTRFSFL 87 (560)
Q Consensus 9 ~~~rw~~l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g~~~~~~~~~~~~ 87 (560)
.+++++.+..=+..-...-+.+=.++|-..+.-....+......++ ...++... .+.+|.....++ |.+++
T Consensus 237 ~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~a-i~~~~~g~g~v~~g~~~~~l~-------~rir~ 308 (461)
T KOG3098|consen 237 LKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIA-IYSIGIGLGEVIGGLDFSILS-------KRIRG 308 (461)
T ss_pred hcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHH-HHHHHHhHHHHHHHHHHHHHh-------hhhhh
Confidence 3455554444444433344667778888888766444433333222 22333333 334455544443 44667
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhccCC-----------CCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccCCCcc
Q 008597 88 RGPWVVHLTGAILCFAGYFLMWASVVGLIH-----------SPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGT 156 (560)
Q Consensus 88 ~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~-----------~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~ 156 (560)
+|.++++.+|.+++..++.+..+.+....+ .+.+.+....+++.|.|.++.++...+.+..-+|++|-.
T Consensus 309 fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~ 388 (461)
T KOG3098|consen 309 FGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQ 388 (461)
T ss_pred cccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHH
Confidence 899999999999999999998777665442 012345666778889999999999999999999999999
Q ss_pred eeeehhhhhhhhHHHH
Q 008597 157 IVGIMKGFLGLGGAAL 172 (560)
Q Consensus 157 a~Gi~~~~~GLsa~i~ 172 (560)
+-.+.|-+.++++.+.
T Consensus 389 ~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 389 AFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988888774
No 248
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.77 E-value=0.24 Score=52.51 Aligned_cols=103 Identities=20% Similarity=0.304 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHHHHHHh--h-c-C------cchHHHHHHHHHhhhhccccchhhHHHHhccCCc---hhhhhhHHHhhhh
Q 008597 419 FIAITLATMSVGHIVVA--S-G-F------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGH---MGTIFNTIAIASP 485 (560)
Q Consensus 419 ~l~~~~~l~~~~~lll~--~-~-~------~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~---~g~~yG~~~~a~~ 485 (560)
++.+..++..+|++++. . . . ...++++..++++|.|+.=+..+++.+|.|..++ ....|++-..+.-
T Consensus 3 tI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in 82 (372)
T PF00854_consen 3 TILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHh
Confidence 34455666777776632 1 1 1 1468889999999999999999999999999663 4445556666777
Q ss_pred hHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 486 VGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 486 ~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
+|++ ++..+.+++.|+.| |...|.++++..+++.++
T Consensus 83 ~G~~-~~~~~~~~i~~~~~------------~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 83 IGSL-FSPTLVPYIQQNYG------------WFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHH-HHHHCCCHHHHCS-------------HHHHHHHHHHHHHHHHHH
T ss_pred hhhH-hhcccchhhccccc------------hhhhhhHHHHHHHHHHHH
Confidence 7774 66667888888765 999999999888777653
No 249
>PF12832 MFS_1_like: MFS_1 like family
Probab=93.70 E-value=0.16 Score=41.67 Aligned_cols=47 Identities=21% Similarity=0.220 Sum_probs=41.3
Q ss_pred hhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhh
Q 008597 365 TVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHR 411 (560)
Q Consensus 365 ~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~ 411 (560)
..-.++-+.+++|+++.+.+.+.++.-+...++..+||+++||.+++
T Consensus 19 ~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 19 LYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34566677788999999999999999999999999999999999754
No 250
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=93.69 E-value=0.94 Score=48.33 Aligned_cols=148 Identities=13% Similarity=0.094 Sum_probs=87.4
Q ss_pred HHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHH
Q 008597 370 SQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSI 447 (560)
Q Consensus 370 ~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~ 447 (560)
.+-.+.. |.+..+++.+.......-.+|-..||.++|++++|++ ..+.+...++....-. ..+...+.+.-.
T Consensus 101 ~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~------f~~T~l~t~v~~~is~~spnf~~L~~f~~ 174 (528)
T KOG0253|consen 101 LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKG------FNLTFLVTGVFGVISGASPNFASLCVFRA 174 (528)
T ss_pred HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchh------hhhhHHHHHHHHHhhcCCCCeehhhHHHH
Confidence 3333433 6666677777777777778899999999999987664 2233333333333322 233455777778
Q ss_pred HHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHH
Q 008597 448 IVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASV 527 (560)
Q Consensus 448 l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l 527 (560)
+.|++.|+ .+...++-.| |++..-..-+..+..-..+|.. +...++=......| +|+-+...+..
T Consensus 175 l~~~g~gg-~pv~~~~yle-~lp~~~r~~~~V~~~~waig~v-~ea~law~vm~~~g------------wr~~l~~~~~p 239 (528)
T KOG0253|consen 175 LWGFGVGG-LPVDSAIYLE-FLPSSHRWLLTVMSFFWAIGQV-FEALLAWGVMSNFG------------WRYLLFTSSTP 239 (528)
T ss_pred HHhccCCC-ccHhHHHHHH-hccCcCCCcchhHHHHHHHHHH-HHHHHHHHHHHhhh------------HHHHHHHHHhH
Confidence 99999998 5555555555 4444444445555545556653 33322222222223 77777777766
Q ss_pred HHHHHHHHHHH
Q 008597 528 AFVGCLVAFLL 538 (560)
Q Consensus 528 ~~la~vl~l~l 538 (560)
..+.++...|+
T Consensus 240 l~~~a~f~~w~ 250 (528)
T KOG0253|consen 240 LMFAARFLVWV 250 (528)
T ss_pred HHHHHHHHhhc
Confidence 66666666655
No 251
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=93.66 E-value=0.54 Score=49.71 Aligned_cols=146 Identities=12% Similarity=0.050 Sum_probs=92.4
Q ss_pred HHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHh
Q 008597 372 IGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGV 451 (560)
Q Consensus 372 i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~ 451 (560)
.+++.|++..+.+.+...--..+.+-..+.|.++||++||+ .++ +..++-+++++.-..++...++++-++-|+
T Consensus 60 LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-----~cl-~~cily~~scl~k~~~~~~~L~~GRvlgGi 133 (354)
T PF05631_consen 60 LYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK-----ACL-LFCILYSLSCLTKHSSNYPVLLLGRVLGGI 133 (354)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH-----HHH-HHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 45678999888888777777777777788899999998654 333 233444556655445667789999999999
Q ss_pred hhhccccchhhHHHHhcc-----CCchhhhhhHHH-hhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHH
Q 008597 452 CYGCQWSLMPTITYEIFG-----VGHMGTIFNTIA-IASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMA 525 (560)
Q Consensus 452 ~~G~~~~l~p~i~~e~FG-----~k~~g~~yG~~~-~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~ 525 (560)
+.-..++.+=+....... .+..+..++.+. +...+-++ .+..++-...|..+. --..+|....
T Consensus 134 aTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI-~aGv~a~~l~~~~~~----------g~vaPF~~a~ 202 (354)
T PF05631_consen 134 ATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAI-GAGVVANVLADWFGF----------GPVAPFDAAI 202 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHH-HHhHHHHHHHHHhCC----------CCcchHHHHH
Confidence 988887766654433233 333455555554 33333332 333333344554431 0256788888
Q ss_pred HHHHHHHHH
Q 008597 526 SVAFVGCLV 534 (560)
Q Consensus 526 ~l~~la~vl 534 (560)
.+++++.++
T Consensus 203 ~~l~~~~~~ 211 (354)
T PF05631_consen 203 VLLAVAAVL 211 (354)
T ss_pred HHHHHHHHH
Confidence 887777654
No 252
>PRK03612 spermidine synthase; Provisional
Probab=92.45 E-value=2 Score=48.22 Aligned_cols=53 Identities=15% Similarity=0.193 Sum_probs=29.5
Q ss_pred HHHHhhhhhhhhhhcHHHHHH-HcCCCCcchhHHHHHHHHhhhhhccccccchh
Q 008597 354 AMLCGMGSGLATVNNISQIGE-SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSD 406 (560)
Q Consensus 354 ~~~~~~g~gl~~i~~~~~i~~-~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD 406 (560)
..++..++++++=--+..+.. -+|.+..+.+.+++++-.+-++|-.+.|.+.+
T Consensus 22 ~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~ 75 (521)
T PRK03612 22 AVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLR 75 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 333444455543333333333 35766666677777777777777666666643
No 253
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=91.79 E-value=2 Score=47.51 Aligned_cols=162 Identities=9% Similarity=0.031 Sum_probs=97.9
Q ss_pred hcHHHHHHH--cCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHH-hh----c-C
Q 008597 367 NNISQIGES--LGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVV-AS----G-F 438 (560)
Q Consensus 367 ~~~~~i~~~--lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll-~~----~-~ 438 (560)
...-++.++ .+-+++.-+..++..+++.+++-+..|+-+-|.++- ++.+.+..+++++++++. .. + .
T Consensus 55 ~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~-----k~Pli~s~ii~~~g~llY~~l~~~~~~~ 129 (488)
T KOG2325|consen 55 TSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSV-----KKPLIVSFLIAIIGNLLYLALAYVPNGV 129 (488)
T ss_pred eecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCc-----ccCHHHHHHHHHHHHHHHHHHHhcccch
Confidence 344566666 556666678899999999999999999988776532 245667778888888765 21 2 2
Q ss_pred cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHh----hhhhHHhhhhhhhhhhhcccccCCCCCcccCc
Q 008597 439 PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI----ASPVGSYVCSVRIIGYIYDNVASGEGNSCNGT 514 (560)
Q Consensus 439 ~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~----a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~ 514 (560)
.+...++=++.|++.|. .+..-..+++.==.++....+..... +..+|+- +++.+.+..++..-- ... .--
T Consensus 130 ~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~-~q~~f~~Lg~~G~~i--~~~-~~~ 204 (488)
T KOG2325|consen 130 KYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPT-IQLAFTPLGEKGFMI--LPG-LIF 204 (488)
T ss_pred HHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHH-HHHHHhhhcCCceEE--cCc-ceE
Confidence 34455677888998886 34444445552223455555544433 3344442 333333333222100 000 123
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHH
Q 008597 515 HCFMLSFLIMASVAFVGCLVAFLL 538 (560)
Q Consensus 515 ~cy~~~f~i~~~l~~la~vl~l~l 538 (560)
+-|..+=++++.++++.+++-...
T Consensus 205 n~YTap~w~m~i~~i~~~v~i~~~ 228 (488)
T KOG2325|consen 205 NMYTAPAWLMAILWIIYIVIILFF 228 (488)
T ss_pred EecchHHHHHHHHHHHHHHHHHhh
Confidence 458899999999998888654444
No 254
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.92 E-value=2.7 Score=39.33 Aligned_cols=89 Identities=8% Similarity=-0.054 Sum_probs=57.7
Q ss_pred HHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhhccccchhhHHH
Q 008597 386 LVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYGCQWSLMPTITY 465 (560)
Q Consensus 386 lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~ 465 (560)
-.++.....++.-++.+.+.++++.| |.+.+......+=.......+.+.+++++++.|++.+..|......+.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K------~sm~lg~~~y~~y~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt 115 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPK------WSMILGSLGYAIYIASFFYPNSYTLYPASALLGFGAALLWTAQGTYLT 115 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhH------HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHH
Confidence 44455555555556677888888633 455443332222111122334567888999999999999999988888
Q ss_pred HhccCCchhhhhhHH
Q 008597 466 EIFGVGHMGTIFNTI 480 (560)
Q Consensus 466 e~FG~k~~g~~yG~~ 480 (560)
+.--.++.+.|.|+-
T Consensus 116 ~~s~~~~~~~~~~if 130 (156)
T PF05978_consen 116 SYSTEETIGRNTGIF 130 (156)
T ss_pred HcCCHHHHhhHHHHH
Confidence 877777777766654
No 255
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=89.75 E-value=1.7 Score=47.93 Aligned_cols=124 Identities=15% Similarity=0.171 Sum_probs=77.1
Q ss_pred HHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHh--hhhccccchhhHHHHhc
Q 008597 391 SIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGV--CYGCQWSLMPTITYEIF 468 (560)
Q Consensus 391 si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~--~~G~~~~l~p~i~~e~F 468 (560)
++...+--...|.+||++++|. .+.+.+....+.-+....... .+++ +.|+ ++++.++..-+.++|.=
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~------~L~~~~~~~~l~~~~~~~~~~-~~~~---~~~l~g~~~~~~s~~~a~vadis 141 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKV------VLLLPLFGTILPALCLLFQGY-WFFL---LLGLSGGFSAIFSVGFAYVADIS 141 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhh------hHHHHHHHHHHhHHHHHHHHH-HHhh---hcccccchhhhhhhhhhheeecc
Confidence 5566677889999999997553 333333332232222222111 1111 3333 45555666666677777
Q ss_pred cCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 469 GVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 469 G~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
-.+++...||++......+. ..+|.+.+++....+ |-..|.+..+..+++.+-.+.
T Consensus 142 ~~~~R~~~~gll~~~~~~~~-~~~p~~~~~~~~~~~------------~a~~f~ia~~~~~~~~~y~~~ 197 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGL-VIGPALGGYLVKFLG------------IALVFLIAAASGILSLLYMLL 197 (463)
T ss_pred chhHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHhcC------------chHHHHHHHHHHHHHHHHHhh
Confidence 77899999999976555555 366677777777654 778888888887777755443
No 256
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=86.56 E-value=0.16 Score=57.03 Aligned_cols=160 Identities=16% Similarity=0.177 Sum_probs=2.8
Q ss_pred cHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-----c-----
Q 008597 368 NISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-----G----- 437 (560)
Q Consensus 368 ~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-----~----- 437 (560)
.+.+|-+..++++.+.+.+++.+.|++.+.-++..+..+|. +|+.++.+..++++++.++++. +
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~------hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~ 98 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG------HRPRWIGIGALLMGLGSLLFALPHFLSGPYSYE 98 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcceeeecHHHHHHHHHHHhccHhhcCCCccc
Confidence 34455556799999999999999999999998888877664 4455666777777777654210 0
Q ss_pred --C---------------------------------------cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhh
Q 008597 438 --F---------------------------------------PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTI 476 (560)
Q Consensus 438 --~---------------------------------------~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~ 476 (560)
. ...++++-++.|++-...+.+-.+.+=|....|+.+..
T Consensus 99 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splY 178 (539)
T PF03137_consen 99 EASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLY 178 (539)
T ss_dssp -----------------------------------------------------SSS------------------------
T ss_pred cccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccc
Confidence 0 01244566888999999999999999999999998888
Q ss_pred hhHHHhhhhhHHhhhhhhhhh----hhcccccCCC------CCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 477 FNTIAIASPVGSYVCSVRIIG----YIYDNVASGE------GNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 477 yG~~~~a~~~g~~ll~~~l~G----~iyD~~g~~~------~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
.|++.....+|+. +|=.+.| ...|..-... .+.=.=.+.|-..|++.+.+.++..+.
T Consensus 179 iGi~~~~~~lGPa-~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aip 245 (539)
T PF03137_consen 179 IGILYAMSILGPA-LGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIP 245 (539)
T ss_dssp --------------------------------------------------------------------
T ss_pred hhhhhHHhhccHH-HHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888666666662 3322333 2224332210 000001135777888888777666543
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=86.02 E-value=2 Score=47.87 Aligned_cols=180 Identities=16% Similarity=0.165 Sum_probs=106.6
Q ss_pred HHhcChhHHHH-HHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHH
Q 008597 341 QSVCTLNFWLL-FVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSF 419 (560)
Q Consensus 341 ~~lkt~~Fwll-~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~ 419 (560)
+++.+++.-++ +++.+.+.+.+++ .+.+==-.|++|..+ ++..+.++-|-.|-+..=++|-|+.+|. ++...
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv-~tFLfWHled~~~~~----~LfGv~~a~~~~gEI~~~ffs~klI~ki--GHv~v 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLV-FTFLFWHLEDLGGIK----TLFGVVSALCHAGEILFYFFSFKLIEKI--GHVNV 438 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHH-HHHHHHHHhhcCCcc----eeeeehhhhhccchHHHHHHHHHHHHHh--cccce
Confidence 56666655443 2333444444443 333322235665322 2333555566666666655555665554 33333
Q ss_pred HHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHh-hhhhHHhhhhhhhhh
Q 008597 420 IAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAI-ASPVGSYVCSVRIIG 497 (560)
Q Consensus 420 l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~-a~~~g~~ll~~~l~G 497 (560)
+.+.+....+=++.+. ..+++.....=++-|++++..|...-+.++..--++-..+.-|++.. -.++|- -+|..+.|
T Consensus 439 ~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~-g~GslIGG 517 (618)
T KOG3762|consen 439 MYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGK-GLGSLIGG 517 (618)
T ss_pred eeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCc-chhhhhhh
Confidence 3333333333333332 35677666677899999999999999999999999989999888822 223332 24445677
Q ss_pred hhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHHHHHh
Q 008597 498 YIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAFLLFI 540 (560)
Q Consensus 498 ~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l~l~~ 540 (560)
.+..+.+. +.+|.+.++.|++.+++-+.+.+
T Consensus 518 ~~v~~fg~------------~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 518 FVVERFGA------------RTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hhheeehh------------HHHHHHHHHHHHHHHHHHHHhhh
Confidence 77777763 67788888777776665554443
No 258
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=85.90 E-value=3.4 Score=39.82 Aligned_cols=109 Identities=17% Similarity=0.102 Sum_probs=67.0
Q ss_pred HHHHhhcCCCh--hhhhHHHHHHhhhhhhh-hhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHh
Q 008597 37 STLKSSQNYDQ--STLDTVSVFKDIGANVG-VLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVV 113 (560)
Q Consensus 37 ~~l~~~~~~s~--~~~~~i~~~~~~g~~~~-~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~ 113 (560)
+.+.+.++.+. .+...+.....++...+ ++.|.+.|++| +|....++......+..+....
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g--------------~~~~~~~~~~~~~~~~~~~~~~-- 89 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYG--------------RRKVLIIGLLLFLLGTLLLALA-- 89 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhcccccc--------------chHHHHHHHHHHHHHHHHHHhC--
Confidence 44445554443 24454555555555553 67888888764 6666666665545553332111
Q ss_pred ccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhccC--CCcceeeehhhh
Q 008597 114 GLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFGD--YGGTIVGIMKGF 164 (560)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~--~RG~a~Gi~~~~ 164 (560)
.....+.+...-.+.|.+.+..+........+++|+ +|+...++....
T Consensus 90 ---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (338)
T COG0477 90 ---PNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLG 139 (338)
T ss_pred ---ccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 112345555555557888888888888888999996 788877777664
No 259
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=85.82 E-value=3.1 Score=39.01 Aligned_cols=92 Identities=12% Similarity=-0.064 Sum_probs=64.2
Q ss_pred hhhhhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchh
Q 008597 59 IGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFF 138 (560)
Q Consensus 59 ~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~ 138 (560)
......++++.+.+++| ||+.+++|++.+.+ |.. . -.. +..+.+..-+++.|.|.+..
T Consensus 49 ~~~~s~l~~P~iv~~lg--------------~K~sm~lg~~~y~~-y~~---~--~~~--~~~~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 49 SFAISCLFAPSIVNKLG--------------PKWSMILGSLGYAI-YIA---S--FFY--PNSYTLYPASALLGFGAALL 106 (156)
T ss_pred HHHHHHHhHHHHHHHHh--------------hHHHHHHHHHHHHH-HHH---H--HHh--hhHHHHHHHHHHHhhhhHHh
Confidence 33334677788888886 99999998877553 222 1 111 22456777888999999999
Q ss_pred hhhhHHHHhhhcc-CCCcceeeehhhhhhhhHHHH
Q 008597 139 NTGNVVTGVMNFG-DYGGTIVGIMKGFLGLGGAAL 172 (560)
Q Consensus 139 ~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GLsa~i~ 172 (560)
.++--....++-. ++|+.-.|+-.+.+-.|..+=
T Consensus 107 W~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G 141 (156)
T PF05978_consen 107 WTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFG 141 (156)
T ss_pred hHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHH
Confidence 9998777777764 468888888777777654433
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=84.78 E-value=5.5 Score=46.00 Aligned_cols=61 Identities=13% Similarity=0.080 Sum_probs=46.9
Q ss_pred HHHHhhcCCChhhhhHH-HHHHhhhhhhhhhHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHHHH
Q 008597 37 STLKSSQNYDQSTLDTV-SVFKDIGANVGVLSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLMWA 110 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i-~~~~~~g~~~~~~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~~l 110 (560)
-.+.+.+|+++++...+ +....+...+++++|.+.|++ +|.++++++++++..+|+.++..
T Consensus 12 lYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~-------------lG~~~tIl~~~ii~~lG~~llai 73 (654)
T TIGR00926 12 LYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGW-------------LGKFKTILYLSIVYVVGHALLSF 73 (654)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hhhHHHHHHHHHHHHHHHHHHHh
Confidence 44566789998887743 333333334588999999996 68999999999999999988654
No 261
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=82.07 E-value=0.4 Score=49.84 Aligned_cols=19 Identities=32% Similarity=0.674 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhhccccccc
Q 008597 386 LVSLWSIWNFLGRFGGGYV 404 (560)
Q Consensus 386 lvSl~si~n~~GRl~~G~l 404 (560)
+..++++++.+||.+.++.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~ 205 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWP 205 (309)
T ss_dssp -------------------
T ss_pred HHHHHHHHHHhcchhccee
Confidence 5568999999999999985
No 262
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=81.46 E-value=28 Score=38.21 Aligned_cols=104 Identities=14% Similarity=0.116 Sum_probs=70.7
Q ss_pred CCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCc---ch-----HHHHHHHH
Q 008597 379 PTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFP---GN-----LYVGSIIV 449 (560)
Q Consensus 379 ~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~---~~-----l~~~~~l~ 449 (560)
+...+.++--++.+....=-+..=|+-|+++ -| ..+.+...+.+++..+=.. ..+ .. ...+-.+.
T Consensus 77 s~~~~~wlsmIym~v~vp~gf~~mw~ldk~G-----LR-~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~ia 150 (480)
T KOG2563|consen 77 SSSAADWLSMIYMVVSVPFGFAAMWILDKFG-----LR-TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIA 150 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhHHHHhhcccc-----hH-HHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHH
Confidence 3334445555677777766677778889986 23 4445566677777664221 111 22 33677888
Q ss_pred HhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHH
Q 008597 450 GVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGS 488 (560)
Q Consensus 450 G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~ 488 (560)
+.++=..+.+.+-+.+-+|+.++.+.+--+-.++..+|.
T Consensus 151 a~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGv 189 (480)
T KOG2563|consen 151 AAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGV 189 (480)
T ss_pred HHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHH
Confidence 899999999999999999999999988777766655554
No 263
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=80.55 E-value=2 Score=44.37 Aligned_cols=150 Identities=17% Similarity=0.195 Sum_probs=97.3
Q ss_pred hHHHHHHHHHHhhhhhhhhhhcHHHHHH-----HcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHH
Q 008597 347 NFWLLFVAMLCGMGSGLATVNNISQIGE-----SLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIA 421 (560)
Q Consensus 347 ~Fwll~~~~~~~~g~gl~~i~~~~~i~~-----~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~ 421 (560)
+|-.+.++.+.+.|+.+.+ ..|.-.| +.....++-..+-|++|.=|.+--++.||+-||.. +-++-..
T Consensus 42 r~m~lv~mc~lgfgsyfcy--d~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~f-----gir~gti 114 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCY--DAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRF-----GIRLGTI 114 (459)
T ss_pred HHHHHHHHHHhcccceeec--CCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhh-----hhhHHHH
Confidence 5666666666666665543 3332222 22333334445678999999999999999999863 2223333
Q ss_pred HHHHHHHHHHHHHhhcC----cchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhh
Q 008597 422 ITLATMSVGHIVVASGF----PGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIG 497 (560)
Q Consensus 422 ~~~~l~~~~~lll~~~~----~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G 497 (560)
+...+..++++.++.+. -+....+-+++|++-=.....--......|--|..+..+|+-..-.-+|+ ..|-.+.+
T Consensus 115 i~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gs-tvNf~lm~ 193 (459)
T KOG4686|consen 115 ILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGS-TVNFLLMP 193 (459)
T ss_pred HHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhc-eeeeeecH
Confidence 44455677888776432 23334456777776666666666667778888999999999866566666 35666778
Q ss_pred hhccccc
Q 008597 498 YIYDNVA 504 (560)
Q Consensus 498 ~iyD~~g 504 (560)
++||.-+
T Consensus 194 ~ly~~~~ 200 (459)
T KOG4686|consen 194 FLYDTMG 200 (459)
T ss_pred HHHHHHH
Confidence 8888654
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=75.22 E-value=9.9 Score=43.16 Aligned_cols=152 Identities=18% Similarity=0.198 Sum_probs=102.5
Q ss_pred hcHHHH-HHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh-----h----
Q 008597 367 NNISQI-GESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA-----S---- 436 (560)
Q Consensus 367 ~~~~~i-~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~-----~---- 436 (560)
.|+-.+ ...++.+...++..|+.++-.....-+..++++|.+. +|-+++.+..++..++..++. .
T Consensus 58 ~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~-----gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p 132 (571)
T KOG1237|consen 58 SNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFL-----GRYFTINIGSLISLLGLFGLTLSAMIPALLP 132 (571)
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 444444 4567877788889999999999999999999999995 666777665555444433211 0
Q ss_pred ------------cCc-----chHHHHHHHHHhhhhccccchhhHHHHhccC------CchhhhhhHHHhhhhhHHhhhhh
Q 008597 437 ------------GFP-----GNLYVGSIIVGVCYGCQWSLMPTITYEIFGV------GHMGTIFNTIAIASPVGSYVCSV 493 (560)
Q Consensus 437 ------------~~~-----~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~------k~~g~~yG~~~~a~~~g~~ll~~ 493 (560)
..+ ..++.+--++.++.|+.-+...+.-+|-|.. ++...-+++-.....+|.+ ++.
T Consensus 133 ~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l-~a~ 211 (571)
T KOG1237|consen 133 FMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGAL-LAQ 211 (571)
T ss_pred ccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHH-HHH
Confidence 001 1456666777889999999999999999982 2333455666566666764 443
Q ss_pred hhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHHHH
Q 008597 494 RIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLVAF 536 (560)
Q Consensus 494 ~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl~l 536 (560)
-+.-++-|. .+|...|-+..++.++++++-+
T Consensus 212 t~~vyiq~~------------~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 212 TVLVYIQDN------------VGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred HHHHhhhhc------------ccceeeccHHHHHHHHHHHHHH
Confidence 333344343 3588899999888888776543
No 265
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=73.14 E-value=8.7 Score=44.61 Aligned_cols=158 Identities=16% Similarity=0.185 Sum_probs=101.1
Q ss_pred HHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhc----------------
Q 008597 374 ESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASG---------------- 437 (560)
Q Consensus 374 ~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~---------------- 437 (560)
+-.++++++.+.+.+.+.|.|.+.=+...+..-|. .|+.++.+..++++++.++.+.+
T Consensus 125 rRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~------HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 125 RRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG------HRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhcCCCCCcceeEeeecccchhhhhHhHHHhcccc------CccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 34588888888888999999988877776654443 34445556666666665542110
Q ss_pred ---C---------------------------------cc-hHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHH
Q 008597 438 ---F---------------------------------PG-NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTI 480 (560)
Q Consensus 438 ---~---------------------------------~~-~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~ 480 (560)
. +. .++++=++.|++--..+++-.+.+=|.-..||-+...|++
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~ 278 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGIL 278 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHH
Confidence 0 01 2344567889999999999999999999999999998988
Q ss_pred HhhhhhHHh---hhhhhhhhhhccc-ccCCC--CCcccCccccHHHHHHHHHHHHHHHHHHHH
Q 008597 481 AIASPVGSY---VCSVRIIGYIYDN-VASGE--GNSCNGTHCFMLSFLIMASVAFVGCLVAFL 537 (560)
Q Consensus 481 ~~a~~~g~~---ll~~~l~G~iyD~-~g~~~--~~~C~G~~cy~~~f~i~~~l~~la~vl~l~ 537 (560)
.....+||. +++..+...-+|. ..... ...=.=.++|...|++++++.+++.+.-..
T Consensus 279 ~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~ 341 (735)
T KOG3626|consen 279 YSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFF 341 (735)
T ss_pred HHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 655555552 3444333333343 11110 001112247899999999998888754433
No 266
>PF12832 MFS_1_like: MFS_1 like family
Probab=70.95 E-value=9 Score=31.30 Aligned_cols=39 Identities=13% Similarity=0.053 Sum_probs=30.4
Q ss_pred HHHHhhcCCChhhhhHHHHHHhhhhhh-hhhHHHHHhhcc
Q 008597 37 STLKSSQNYDQSTLDTVSVFKDIGANV-GVLSGLLYSFAT 75 (560)
Q Consensus 37 ~~l~~~~~~s~~~~~~i~~~~~~g~~~-~~~~G~~~d~~g 75 (560)
+-..++.|+|.+|+..+..+..+-..+ .++.|.+.||++
T Consensus 24 ~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~ 63 (77)
T PF12832_consen 24 PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFG 63 (77)
T ss_pred hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 444456999999999777766666665 678999999987
No 267
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=68.34 E-value=80 Score=35.06 Aligned_cols=41 Identities=15% Similarity=0.187 Sum_probs=31.9
Q ss_pred hhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcc
Q 008597 460 MPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYD 501 (560)
Q Consensus 460 ~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD 501 (560)
+=....|++-.++...-|+++.++..+|.+ +++.+..++.+
T Consensus 150 FW~fandi~t~~qakRfy~l~~~ganlg~i-~sg~~~~~~~~ 190 (472)
T TIGR00769 150 FWGFANQITTIDEAKRFYALFGLGANVALI-FSGRTIKYFSK 190 (472)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 334577888889999999999999999985 66666666553
No 268
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=66.96 E-value=6.4 Score=44.07 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=41.2
Q ss_pred hcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhc
Q 008597 367 NNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRM 412 (560)
Q Consensus 367 ~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~ 412 (560)
-.++-+.+.+|+++.+.++++.+--+..+++.++||++.||+.++|
T Consensus 32 pll~vy~kQLGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r 77 (618)
T KOG3762|consen 32 PLLAVYFKQLGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRR 77 (618)
T ss_pred hHHHHHHHHcCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcC
Confidence 4667788899999999999999999999999999999999996543
No 269
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=65.58 E-value=2e+02 Score=30.98 Aligned_cols=111 Identities=20% Similarity=0.220 Sum_probs=69.6
Q ss_pred HHHHHHHHHhhhhhhhhhhcHHHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHH--
Q 008597 349 WLLFVAMLCGMGSGLATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLA-- 425 (560)
Q Consensus 349 wll~~~~~~~~g~gl~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~-- 425 (560)
|++.+..+++..+|+++=..+...+..+ |-.-.+.+..++.+-.+-.+|..++=++.|.-..- | ++..=++
T Consensus 10 alL~laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~----~--Fv~vElllg 83 (508)
T COG4262 10 ALLLLAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALA----R--FVDVELLLG 83 (508)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHH----H--HHHHHHHHH
Confidence 6677778888889999888888998887 65556667777777777777777777776664311 1 1111111
Q ss_pred ----HHHHHH-HHHhhc---CcchHHHHHHHHHhhhhccccchhhHHH
Q 008597 426 ----TMSVGH-IVVASG---FPGNLYVGSIIVGVCYGCQWSLMPTITY 465 (560)
Q Consensus 426 ----l~~~~~-lll~~~---~~~~l~~~~~l~G~~~G~~~~l~p~i~~ 465 (560)
+.+... +.++.. +...++..+..+|.--|.-.++.-.+.-
T Consensus 84 ligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~ 131 (508)
T COG4262 84 LIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQ 131 (508)
T ss_pred HhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 111111 123321 2245777888899988887766655543
No 270
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=65.55 E-value=22 Score=29.81 Aligned_cols=65 Identities=15% Similarity=0.176 Sum_probs=48.2
Q ss_pred cccccccHHHHhhcCCChhhhhHHHHHHhhhhhhhh-hHHHHHhhccccccccccccccCCcHHHHHHHHHHHHHHHHHH
Q 008597 30 YTFGIYSSTLKSSQNYDQSTLDTVSVFKDIGANVGV-LSGLLYSFATLNHHHRTRFSFLRGPWVVHLTGAILCFAGYFLM 108 (560)
Q Consensus 30 Y~fs~ys~~l~~~~~~s~~~~~~i~~~~~~g~~~~~-~~G~~~d~~g~~~~~~~~~~~~~Gp~~~~~~g~~~~~~G~~~~ 108 (560)
++|.-.-|.++++.++|.+|...++.+..+|-.+|- ...++.++. .++..+.+|.+...+....+
T Consensus 9 FayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~--------------~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 9 FAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS--------------RPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------------cHHHHHHHHHHHHHHHHHHH
Confidence 456666799999999999999999999988877754 445444432 26677788877777777664
No 271
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=63.27 E-value=18 Score=39.80 Aligned_cols=123 Identities=15% Similarity=0.107 Sum_probs=78.6
Q ss_pred hhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHh---------h
Q 008597 366 VNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVA---------S 436 (560)
Q Consensus 366 i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~---------~ 436 (560)
...++|+.+++|++..-.+..--+-=+...+-..+-|..|||...|++-.|+... +...++.+++++.. .
T Consensus 52 lsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~-~~s~~i~~~l~Lig~aaDig~~lg 130 (498)
T KOG0637|consen 52 LSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFIL-AGSLLIAVSLFLIGYAADIGLLLG 130 (498)
T ss_pred hccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHH-HhhHHHHHHHhhhhhHhhhhHHhc
Confidence 4567899999999876544433344455667788899999999999875555443 44444455554321 1
Q ss_pred cCcc---------hHHHHHHHHHhhhhccccchhhHHHHhccCCchhh-hhhHHHhhhhhHHh
Q 008597 437 GFPG---------NLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGT-IFNTIAIASPVGSY 489 (560)
Q Consensus 437 ~~~~---------~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~-~yG~~~~a~~~g~~ 489 (560)
+.+. .+.++.-+.=++.=...+-.-+..+|.....+.-+ ++.+-.+..++|+.
T Consensus 131 d~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnv 193 (498)
T KOG0637|consen 131 DNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNV 193 (498)
T ss_pred CCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcce
Confidence 1111 12223333333555666778889999999888888 77776666677774
No 272
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=58.73 E-value=29 Score=29.07 Aligned_cols=47 Identities=13% Similarity=0.024 Sum_probs=37.5
Q ss_pred hhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhh
Q 008597 362 GLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIV 408 (560)
Q Consensus 362 gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~ 408 (560)
.+.+.-.+|.+.++.+++.++++.+-|...+.=.+|-+....+.++.
T Consensus 8 RFayTplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~ 54 (85)
T PF06779_consen 8 RFAYTPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS 54 (85)
T ss_pred HHHHHhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34566678899999999999988888888888888888887776653
No 273
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=52.50 E-value=1.5e+02 Score=31.81 Aligned_cols=183 Identities=13% Similarity=0.167 Sum_probs=96.7
Q ss_pred cHHHHhcChh--HHHHHHHHHHhhhhhhhhhhcHHHHH-HHcCCCCcchh----HHHHHHHHhhhhhccccccchhhhhh
Q 008597 338 NILQSVCTLN--FWLLFVAMLCGMGSGLATVNNISQIG-ESLGYPTSAIN----SLVSLWSIWNFLGRFGGGYVSDIVLH 410 (560)
Q Consensus 338 t~~~~lkt~~--Fwll~~~~~~~~g~gl~~i~~~~~i~-~~lG~~~~~aa----~lvSl~si~n~~GRl~~G~lsD~~~~ 410 (560)
.+.+..+||. -|-+|+.+..+. .--+.|-.|+. +..- +..++ ..=++...-.+++-+..|.+.-.+.+
T Consensus 226 ~l~~~y~np~ll~WSlWwAl~scg---~~QV~nY~Q~LW~~~~--~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r 300 (433)
T KOG3810|consen 226 DLQECYSNPRLLKWSLWWALASCG---YYQVTNYTQILWKEVA--PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR 300 (433)
T ss_pred HHHHHhcCchhhhhHHHHHHhhch---hHHHHHHHHHHHHhhC--CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch
Confidence 3566777775 477888775543 21122222222 2321 11111 11123333344555666776433321
Q ss_pred hcCCCchHHHHHHHHHHHHHHHHHh-hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHh
Q 008597 411 RMGWERPSFIAITLATMSVGHIVVA-SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSY 489 (560)
Q Consensus 411 ~~~~~R~~~l~~~~~l~~~~~lll~-~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ 489 (560)
.+...+.+.....+...+.+. ....+..|++-+++...|.-...+.-.-+++---.+.+|-.+|+-.+ ++-
T Consensus 301 ----~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTF---vAl- 372 (433)
T KOG3810|consen 301 ----WGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTF---VAL- 372 (433)
T ss_pred ----hhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHH---HHH-
Confidence 223444444333333323332 34446788889999999998888877777888888888888888643 222
Q ss_pred hhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 490 VCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 490 ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
++-..+--.+.|..|-+-+..- .-.-|..=|++.+++.+++..+
T Consensus 373 ~lQsilT~iVvd~~g~~L~ir~-Q~~~Y~~Yf~v~~~i~~~~~~~ 416 (433)
T KOG3810|consen 373 ILQSILTLIVVDDRGLGLDIRT-QFVVYSSYFIVLGVIFLIGFGI 416 (433)
T ss_pred HHHHhheEEEEcccccCCCcce-eEEEEeehHHHHHHHHHHHHHH
Confidence 2333445566776654321100 0112333377888877777654
No 274
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=50.46 E-value=1.1e+02 Score=30.79 Aligned_cols=56 Identities=7% Similarity=-0.072 Sum_probs=40.8
Q ss_pred HHHHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhhHHHHHHHHHHh
Q 008597 123 LMCLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLGGAALIQAYDTI 179 (560)
Q Consensus 123 ~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLsa~i~s~i~~~~ 179 (560)
..+.|..-+.+|.-..-.-.+--..|-.| +|...-+++.++.++|..++-++...+
T Consensus 34 ~~FyY~sg~~lGv~~s~li~~~~~~k~lP-rk~~~~~~l~gg~~~~~y~l~~~~~nl 89 (249)
T PF10225_consen 34 VLFYYSSGISLGVLASLLILLFQLSKLLP-RKSMFYAVLYGGWSFGLYFLQQLWENL 89 (249)
T ss_pred hhHHHhhhHHHHHHHHHHHHHHHHHHHcc-CcchhHHHHhhhhHHHHHHHHHHHHHH
Confidence 45566665566666666666677789999 777778888888888888887776543
No 275
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=48.75 E-value=57 Score=34.57 Aligned_cols=23 Identities=13% Similarity=0.254 Sum_probs=17.7
Q ss_pred cHHHHhcChhHHHHHHHHHHhhh
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMG 360 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g 360 (560)
..++.+++|..|...+++.++..
T Consensus 237 ~~~~~~~nP~~~a~~lgli~~~~ 259 (385)
T PF03547_consen 237 SILKLFKNPPLIAIILGLIIGLI 259 (385)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHH
Confidence 34678999999988887777653
No 276
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=41.59 E-value=5.1e+02 Score=28.40 Aligned_cols=71 Identities=15% Similarity=0.067 Sum_probs=49.0
Q ss_pred HHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHHHHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhh
Q 008597 339 ILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQIGESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLH 410 (560)
Q Consensus 339 ~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~ 410 (560)
+++=++.|.|..- +++.+....-+.+-+.+-.+.++.|+++...+.+=++-+++...|.++..++.+|++.
T Consensus 252 w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl 322 (432)
T PF06963_consen 252 WRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL 322 (432)
T ss_pred HHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3445556655543 2233333333334445567778889999988888899999999999999999888864
No 277
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=39.15 E-value=6.1e+02 Score=28.62 Aligned_cols=69 Identities=10% Similarity=0.065 Sum_probs=37.7
Q ss_pred cHHHHhcChhHHHHHHHHHHhhhhhhhhhhcHHHH-HHHcCCCCcchhHHHHHHHHhhhhhccccccchhhhhhh
Q 008597 338 NILQSVCTLNFWLLFVAMLCGMGSGLATVNNISQI-GESLGYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHR 411 (560)
Q Consensus 338 t~~~~lkt~~Fwll~~~~~~~~g~gl~~i~~~~~i-~~~lG~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~ 411 (560)
.+++.+|-|....+.+....+= .|+......... ..+.|++.++.+. +++..+.--++.|++.-|+.+.
T Consensus 270 ~l~~ilkLp~V~~li~ilL~~K-igF~a~da~T~LKLlEkG~~KE~LAl----~~li~~P~qii~~~~~~Kws~g 339 (544)
T PF13000_consen 270 SLWKILKLPNVQTLIIILLTAK-IGFQANDAVTSLKLLEKGLSKEDLAL----LVLIDFPFQIILPYYIGKWSAG 339 (544)
T ss_pred HHHHHHcCchHHHHHHHHHHHH-hccccchhhhHHHHHHcCCCHHHhHH----HHHHhhhHHHHHHHHhhhhhcC
Confidence 4677888887777766554432 122111111111 2356888876544 4455555566666666666553
No 278
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=38.12 E-value=28 Score=32.50 Aligned_cols=37 Identities=14% Similarity=0.235 Sum_probs=22.9
Q ss_pred HHHHHHHhhhhccccchhhH-HHHhccCCchhhhhhHH
Q 008597 444 VGSIIVGVCYGCQWSLMPTI-TYEIFGVGHMGTIFNTI 480 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i-~~e~FG~k~~g~~yG~~ 480 (560)
.+..++|+.||.+-+.-=.- ...++|-+++-.|++-+
T Consensus 107 Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 107 FGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred HHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHHHH
Confidence 34566788888754443222 45566777777777665
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=36.34 E-value=5.2e+02 Score=28.17 Aligned_cols=46 Identities=9% Similarity=0.059 Sum_probs=21.1
Q ss_pred hhhhcHHHHHHHc-CCCCcchhHHHHHHHHhhhhhccccccchhhhhhh
Q 008597 364 ATVNNISQIGESL-GYPTSAINSLVSLWSIWNFLGRFGGGYVSDIVLHR 411 (560)
Q Consensus 364 ~~i~~~~~i~~~l-G~~~~~aa~lvSl~si~n~~GRl~~G~lsD~~~~~ 411 (560)
+.++....+.+.. +.++ +..+-+...+++.+--++.-++--+...|
T Consensus 36 ~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~ 82 (406)
T KOG1479|consen 36 MFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTR 82 (406)
T ss_pred hhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444444 3433 33444444444444444444554454443
No 280
>COG4603 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=33.26 E-value=2.3e+02 Score=30.23 Aligned_cols=101 Identities=16% Similarity=0.256 Sum_probs=58.9
Q ss_pred HHHHHHHHhhhhccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccC--CCC-----CcccCcc
Q 008597 443 YVGSIIVGVCYGCQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVAS--GEG-----NSCNGTH 515 (560)
Q Consensus 443 ~~~~~l~G~~~G~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~--~~~-----~~C~G~~ 515 (560)
...+++.|...|+.|+..|.+....||..+.=+ .+| + ..+.-++.+-.+-|.++|.++. .++ .-=..+.
T Consensus 115 ~p~a~l~g~~~G~~wa~ipg~Lka~f~~nEVIt--tiM-l-NyIa~~l~~~lV~~~~~~p~~~~~~~T~~i~~~a~lp~~ 190 (356)
T COG4603 115 LPLALLAGAAGGGLWALIPGLLKARFGVNEVIT--TIM-L-NYIAVYLLNYLVEGPLRDPAGTNFPQTRPIPDAARLPSL 190 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHH--HHH-H-HHHHHHHHHHHHcCcccCCCcCCCccCccCchhhcCCcc
Confidence 446788899999999999999999999776532 333 2 2223333444566778887773 221 0001111
Q ss_pred ccHH-HHHHHHHHHHHHHHHHHHHHhhhhhhhH
Q 008597 516 CFML-SFLIMASVAFVGCLVAFLLFIRTRRFYK 547 (560)
Q Consensus 516 cy~~-~f~i~~~l~~la~vl~l~l~~r~r~~~~ 547 (560)
-.+. .+.....+.++++++..++.+||+.=||
T Consensus 191 ~~~~~~~~~g~lial~~av~~~~ll~kT~~G~~ 223 (356)
T COG4603 191 FLASGRLHWGFLLALAAAVLVWFLLKKTVFGYE 223 (356)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHccCCeE
Confidence 1111 3444444555556666667777765443
No 281
>PLN02922 prenyltransferase
Probab=32.99 E-value=3.7e+02 Score=28.10 Aligned_cols=112 Identities=15% Similarity=0.033 Sum_probs=57.3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhhcccchhhhhhHHHHhhhcc-CCCcceeeehhhhhhh
Q 008597 89 GPWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLMCLFMFLAAHSQTFFNTGNVVTGVMNFG-DYGGTIVGIMKGFLGL 167 (560)
Q Consensus 89 Gp~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~t~~~~Fp-~~RG~a~Gi~~~~~GL 167 (560)
-||-+..++-++..++..+.++..... . .+ .+...++ .|...+++|++. -|| ++||+ |=+..+.+.
T Consensus 94 s~~~v~~~~~~~~~la~~g~~ll~~~~-~--~~-~~l~iG~-~g~~~~~~Yt~g------P~pl~y~gL--GE~~v~i~f 160 (315)
T PLN02922 94 SRRGVLAAAIGCLALGAAGLVWASLVA-G--NI-RVILLLA-AAILCGYVYQCP------PFRLSYKGL--GEPLCFAAF 160 (315)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHc-c--Ch-HHHHHHH-HHHHHHHHHhcC------CcccccCcc--hHHHHHHHH
Confidence 366666666666666666555542210 1 12 2222333 456678888863 455 57877 434444444
Q ss_pred hHHHHHHHHHHhcCC--C------chhHHHHHHHHhHHHHHhhheeeeecCCCC
Q 008597 168 GGAALIQAYDTIWKG--R------PSTYLLILALLPTFASLLFMSLVRIHGTNS 213 (560)
Q Consensus 168 sa~i~s~i~~~~f~~--~------~~~fll~la~~~~~v~~~~~~~ir~~~~~~ 213 (560)
|..+..-.|...-+. + +-.--.+++..|.........+++..++.+
T Consensus 161 G~l~v~g~y~~~~~~~~~~~~~~~~~~~~~~l~slp~gll~~~iL~~Nn~rD~e 214 (315)
T PLN02922 161 GPLATTAFYLALASGAGGSEMAILPLTPTVLSASVLVGLTTTLILFCSHFHQID 214 (315)
T ss_pred HHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHccCcchh
Confidence 444433222221110 0 112223455666666677777888877664
No 282
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=31.87 E-value=3.4e+02 Score=29.61 Aligned_cols=152 Identities=13% Similarity=0.163 Sum_probs=80.3
Q ss_pred cCCCCcchhHHH-HHHHHhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHhhhh
Q 008597 376 LGYPTSAINSLV-SLWSIWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVASGFPGNLYVGSIIVGVCYG 454 (560)
Q Consensus 376 lG~~~~~aa~lv-Sl~si~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~~~~~~l~~~~~l~G~~~G 454 (560)
.|+++++...-+ -+..-...+.-+....++|.++-| +..+.-++...+.-.+++...+....-+.=+..|++..
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a 109 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATA 109 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHH
Confidence 677766654322 344444555566778899998533 23322222222222222223333334444455565555
Q ss_pred ccccchhhHHHHhccCCchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHHHHHH
Q 008597 455 CQWSLMPTITYEIFGVGHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFVGCLV 534 (560)
Q Consensus 455 ~~~~l~p~i~~e~FG~k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~la~vl 534 (560)
+-.+-+.-+-+ ....+|+-+.=+..-.+..+|-. .+. +.|.+.-..+ ...|..-.++..+...+++++
T Consensus 110 ~evay~sYiys-~v~~~~yq~vts~~raa~l~g~~-~s~-~lgQllvs~~---------~~sy~~L~~isl~~~~~a~~~ 177 (412)
T PF01770_consen 110 AEVAYYSYIYS-VVDKEHYQKVTSYTRAATLVGRF-ISS-LLGQLLVSFG---------GVSYFQLNYISLASVSLALLI 177 (412)
T ss_pred HHHHHHHHhee-ecCHHHHHHHHHHHHHHHHHHHH-HHH-HHHHHHHHhc---------CCCHHHHHHHHHHHHHHHHHH
Confidence 43333222222 23456777666666555555543 232 3443333222 245999999999888899988
Q ss_pred HHHHHhhhhh
Q 008597 535 AFLLFIRTRR 544 (560)
Q Consensus 535 ~l~l~~r~r~ 544 (560)
++.+-..+|+
T Consensus 178 ~~fLP~~~~S 187 (412)
T PF01770_consen 178 ALFLPMPKRS 187 (412)
T ss_pred HHHcCCCCcc
Confidence 8888665554
No 283
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=30.78 E-value=4.1e+02 Score=24.11 Aligned_cols=97 Identities=19% Similarity=0.040 Sum_probs=47.6
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhccCCCCcHHHH-HHHHHHhhcccchhhhhhHHHHhhhccCCCcceeeehhhhhhhh
Q 008597 90 PWVVHLTGAILCFAGYFLMWASVVGLIHSPPVPLM-CLFMFLAAHSQTFFNTGNVVTGVMNFGDYGGTIVGIMKGFLGLG 168 (560)
Q Consensus 90 p~~~~~~g~~~~~~G~~~~~l~~~~~~~~~~~~~~-~~~~~l~g~g~~~~~~~~~~t~~~~Fp~~RG~a~Gi~~~~~GLs 168 (560)
.+....+|+++.++|.+.+-..-...++. ...+ .....+.+.. +.....+.++++...-+....+..+=
T Consensus 33 ~~~l~~lGall~~~gii~fvA~nW~~i~~--~~k~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~l~~~l~ 102 (145)
T PF09925_consen 33 ARILLYLGALLLGLGIILFVAANWDDIPR--LAKLGLLLALLLLSY--------VGGFWLWRRRSPRLAEALLLLGAVLF 102 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccH--HHHHHHHHHHHHHHH--------HHHHHHHhccCcHHHHHHHHHHHHHH
Confidence 67788999999999998875555554442 2111 1122221111 11111122555544444444444443
Q ss_pred HHHHHHHHHHhc-CCCchhHHHHHHHHhH
Q 008597 169 GAALIQAYDTIW-KGRPSTYLLILALLPT 196 (560)
Q Consensus 169 a~i~s~i~~~~f-~~~~~~fll~la~~~~ 196 (560)
++.+..+.+.|- ++|+..+++..++...
T Consensus 103 ga~ialigQ~y~~~~~~~~~~~~W~~~~l 131 (145)
T PF09925_consen 103 GALIALIGQIYQTGADPWQLFLLWALLAL 131 (145)
T ss_pred HHHHHHHHhHhcCCCchHHHHHHHHHHHH
Confidence 444444455444 3455555555554433
No 284
>PRK01610 putative voltage-gated ClC-type chloride channel ClcB; Provisional
Probab=27.19 E-value=3.7e+02 Score=29.23 Aligned_cols=103 Identities=13% Similarity=0.223 Sum_probs=60.7
Q ss_pred hhcCcchHHHHHHHHHhhhhccccchhhHHHHhccC-CchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccC
Q 008597 435 ASGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNG 513 (560)
Q Consensus 435 ~~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~-k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G 513 (560)
....+...+..++.+|-+.|..++..- ...|.. +....+|.++.++..+++ ..+.|+.+.+.-.|-.
T Consensus 314 gsG~~GG~f~P~l~iGa~~G~~~g~~~---~~~~~~~~~~~~~~a~vGmaA~laa-~~~aPltaivl~~Elt-------- 381 (418)
T PRK01610 314 GSGAPGGVFTPTLFVGLAIGMLYGRSL---GLWLPDGEEITLLLGLTGMATLLAA-TTHAPIMSTLMICEMT-------- 381 (418)
T ss_pred hcCCCchhhHHHHHHHHHHHHHHHHHH---HHhCCCcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHh--------
Confidence 345667788888888888887665432 222332 223468888888888888 4788888865544321
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHh
Q 008597 514 THCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRR 553 (560)
Q Consensus 514 ~~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~~ 553 (560)
+.|+. +.-....|+++.+++- ..+.+..|++.+.||
T Consensus 382 -g~~~~-~~p~~ia~~ia~~vs~--~~~~~siy~~~~~~~ 417 (418)
T PRK01610 382 -GEYQL-LPGLLIACVIASVISR--TLRRDSIYRQHTAEH 417 (418)
T ss_pred -CCHhH-HHHHHHHHHHHHHHHH--HhCCCCchHHHHhcc
Confidence 12544 2222333334443332 223667898887766
No 285
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=24.39 E-value=7.8e+02 Score=25.23 Aligned_cols=23 Identities=4% Similarity=-0.087 Sum_probs=18.0
Q ss_pred cCcHHHHhcChhHHHHHHHHHHh
Q 008597 336 DMNILQSVCTLNFWLLFVAMLCG 358 (560)
Q Consensus 336 ~~t~~~~lkt~~Fwll~~~~~~~ 358 (560)
+.+.++.+|+++=|.+...+.+.
T Consensus 84 ~~s~~~~LK~K~tw~w~~~Yg~w 106 (267)
T PF07672_consen 84 KPSYKSILKEKETWKWILIYGIW 106 (267)
T ss_pred cchHHHHHccchHHHHHHHHHHH
Confidence 36789999999999887766443
No 286
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=24.10 E-value=6.4e+02 Score=27.42 Aligned_cols=116 Identities=12% Similarity=0.107 Sum_probs=64.1
Q ss_pred HhhhhhccccccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHhh-cCcchHHHHHHHHHhhhhccccchhhHHHHhccC
Q 008597 392 IWNFLGRFGGGYVSDIVLHRMGWERPSFIAITLATMSVGHIVVAS-GFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV 470 (560)
Q Consensus 392 i~n~~GRl~~G~lsD~~~~~~~~~R~~~l~~~~~l~~~~~lll~~-~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~ 470 (560)
+-..+-++.+.++-+|+. ...+.+. ...++.+++++.+. .+...=.++.++.+++.|..=..+-.+++ .|+.
T Consensus 70 ~P~l~~Kl~aP~fi~~v~----y~~Ri~~--~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~ 142 (402)
T PF02487_consen 70 LPSLLVKLIAPFFIHRVP----YWIRILI--CVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK 142 (402)
T ss_pred HHHHHHHHHhHhhhhhcc----chHHHHH--HHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc
Confidence 345566888888877663 2233332 23456667766554 33334456788888888877777777654 6774
Q ss_pred CchhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCccccHHHHHHHHHHHHH
Q 008597 471 GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGTHCFMLSFLIMASVAFV 530 (560)
Q Consensus 471 k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~~cy~~~f~i~~~l~~l 530 (560)
.-. ..| ..+.+.++ ++|+..+-.+-+ .| -..+.+++++..+.++
T Consensus 143 ~~l-~~w---ssGTG~aG-l~Ga~~y~~lT~-~g----------~s~~~tll~~~~lp~~ 186 (402)
T PF02487_consen 143 SSL-SAW---SSGTGGAG-LVGALYYLGLTT-LG----------LSPRTTLLIMLVLPAI 186 (402)
T ss_pred ccc-ccc---cCCcChhh-HHHHHHHHHHHH-hC----------cCHHHHHHHHHHHHHH
Confidence 322 222 23444444 244333333333 22 2367788888766543
No 287
>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional
Probab=23.38 E-value=5e+02 Score=29.34 Aligned_cols=103 Identities=12% Similarity=0.215 Sum_probs=58.0
Q ss_pred hcCcchHHHHHHHHHhhhhccccchhhHHHHhccCC-chhhhhhHHHhhhhhHHhhhhhhhhhhhcccccCCCCCcccCc
Q 008597 436 SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGVG-HMGTIFNTIAIASPVGSYVCSVRIIGYIYDNVASGEGNSCNGT 514 (560)
Q Consensus 436 ~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~k-~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~g~~~~~~C~G~ 514 (560)
...+...+..++.+|-+.|..++..- ..+++.. ....+|-++.++..+++ ..+.|+.+.+.-.|-.
T Consensus 333 ~G~~GG~f~P~l~iGa~~G~~~g~~~---~~~~~~~~~~~~~~a~vGmaa~~aa-~~~aPlt~i~l~~Elt--------- 399 (574)
T PRK01862 333 SGAVGGVFTPTLFVGAVVGSLFGLAM---HALWPGHTSAPFAYAMVGMGAFLAG-ATQAPLMAILMIFEMT--------- 399 (574)
T ss_pred cCCCccchhhHHHHHHHHHHHHHHHH---HHhCCCcccchHHHHHHHHHHHHHH-HHccHHHHHHHHHHHh---------
Confidence 45567788888888888887665422 2223321 12345888888888888 4788888865544411
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhh
Q 008597 515 HCFMLSFLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRL 554 (560)
Q Consensus 515 ~cy~~~f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~~~ 554 (560)
..|+...-+ ...|+++..++-. ...+..|...++++.
T Consensus 400 ~~~~~~~P~-~ia~~~a~~v~~~--~~~~~iy~~~~~~~~ 436 (574)
T PRK01862 400 LSYQVVLPL-MVSCVVAYFTARA--LGTTSMYEITLRRHQ 436 (574)
T ss_pred CCHhHHHHH-HHHHHHHHHHHHH--hCCCChHHHHHHhcc
Confidence 124432222 2233344433322 234667886665544
No 288
>PF14012 DUF4229: Protein of unknown function (DUF4229)
Probab=22.92 E-value=2.2e+02 Score=22.80 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHhhcC
Q 008597 521 FLIMASVAFVGCLVAFLLFIRTRRFYKQVVLRRLGH 556 (560)
Q Consensus 521 f~i~~~l~~la~vl~l~l~~r~r~~~~~~~~~~~~~ 556 (560)
+.......+++..+++++..+.|+.-.+.+++|.++
T Consensus 33 ~~~~l~A~vis~~lS~~ll~~~R~~~~~~ia~~~~r 68 (69)
T PF14012_consen 33 LVAALLALVISMPLSYVLLRRLRDRASADIAARDER 68 (69)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344444567788899999999998888787777553
No 289
>PF04995 CcmD: Heme exporter protein D (CcmD); InterPro: IPR007078 The CcmD protein is part of a C-type cytochrome biogenesis operon []. The exact function of this protein is uncertain. It has been proposed that CcmC, CcmD and CcmE interact directly with each other, establishing a cytoplasm to periplasm haem delivery pathway for cytochrome c maturation []. This protein is found fused to CcmE in P52224 from SWISSPROT. These proteins contain a predicted transmembrane helix.; GO: 0006810 transport, 0016021 integral to membrane
Probab=22.55 E-value=1.5e+02 Score=21.70 Aligned_cols=6 Identities=50% Similarity=0.700 Sum_probs=2.3
Q ss_pred hhhhhH
Q 008597 542 TRRFYK 547 (560)
Q Consensus 542 ~r~~~~ 547 (560)
.|+..+
T Consensus 29 ~r~~~~ 34 (46)
T PF04995_consen 29 RRRLRK 34 (46)
T ss_pred HHHHHH
Confidence 333333
No 290
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=22.25 E-value=1.1e+03 Score=26.17 Aligned_cols=57 Identities=12% Similarity=0.109 Sum_probs=35.9
Q ss_pred HHHHHHHHHhcCcccccccccHHHHhhcCCChhhh--hHHHHHHh---hhhhh--hhhHHHHHhhcc
Q 008597 16 TVASIWIQCCSGATYTFGIYSSTLKSSQNYDQSTL--DTVSVFKD---IGANV--GVLSGLLYSFAT 75 (560)
Q Consensus 16 l~~~~~i~~~~G~~Y~fs~ys~~l~~~~~~s~~~~--~~i~~~~~---~g~~~--~~~~G~~~d~~g 75 (560)
++...+...|...+|..- -++||.+..+..+. +.+.+.+. +-+.+ .+..+.+.+|++
T Consensus 9 ~~~~~l~fF~il~~Y~iL---R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~ 72 (472)
T TIGR00769 9 FLPLFLMFFCILFNYTIL---RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILS 72 (472)
T ss_pred HHHHHHHHHHHHHHHHHH---HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 445555566666777665 89999998865422 44555444 33332 466788888875
No 291
>PRK05277 chloride channel protein; Provisional
Probab=21.27 E-value=7.8e+02 Score=26.79 Aligned_cols=64 Identities=14% Similarity=0.294 Sum_probs=39.8
Q ss_pred hcCcchHHHHHHHHHhhhhccccchhhHHHHhccC-CchhhhhhHHHhhhhhHHhhhhhhhhhhhcccc
Q 008597 436 SGFPGNLYVGSIIVGVCYGCQWSLMPTITYEIFGV-GHMGTIFNTIAIASPVGSYVCSVRIIGYIYDNV 503 (560)
Q Consensus 436 ~~~~~~l~~~~~l~G~~~G~~~~l~p~i~~e~FG~-k~~g~~yG~~~~a~~~g~~ll~~~l~G~iyD~~ 503 (560)
...+......++.+|-+.|..++.. ....|.. ......|-.+.++..+++ .++.|+.+.+.--|
T Consensus 315 sG~~GG~f~Psl~iGa~~G~~~g~~---~~~~~p~~~~~~~~~a~~G~aA~la~-~~~aPlt~~v~~~E 379 (438)
T PRK05277 315 SGAPGGIFAPMLALGTLLGLAFGMV---AAALFPQYHIEPGTFAIAGMGALFAA-TVRAPLTGIVLVLE 379 (438)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHH---HHHHcCcccccHHHHHHHHHHHHHHH-HHHhHHHHHHHHHH
Confidence 4566778888888888888755432 2233432 223356777777777777 47777777554433
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=20.98 E-value=9.5e+02 Score=26.22 Aligned_cols=27 Identities=7% Similarity=0.047 Sum_probs=14.6
Q ss_pred HHHHHHHhhhhccccchhhHHHHhccCC
Q 008597 444 VGSIIVGVCYGCQWSLMPTITYEIFGVG 471 (560)
Q Consensus 444 ~~~~l~G~~~G~~~~l~p~i~~e~FG~k 471 (560)
+..++.|++.|..-+..-.+.+ .|+.+
T Consensus 111 ~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 111 ASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 3455666666655555555443 56644
Done!