BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008602
(560 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W4E1|RH47_ARATH DEAD-box ATP-dependent RNA helicase 47, mitochondrial
OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2
Length = 551
Score = 719 bits (1855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/556 (63%), Positives = 437/556 (78%), Gaps = 6/556 (1%)
Query: 1 MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFE 60
M A STR L+L+ + K S H RFL V + G LTLASL ++
Sbjct: 1 MAASTSTRFLVLLKDFSAFRKISWTCAATNFHRQSRFLCHVAKEDGSLTLASLDLGNKPR 60
Query: 61 PTNKNKSNKPKKHSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPPL 120
K K+ K + E+ + KV+AV++D +K KK EI S F+A SF ELGLP
Sbjct: 61 KFGKGKAMKLEGSFVTEMGQGKVRAVKNDKMKVVKEKKPAEIVSPLFSAKSFEELGLPDS 120
Query: 121 LLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSS 180
LL+ LEREGF+VPT+VQSAA+P+I+K HD VIQSYTGSGKTLAYLLPILS++GPL +KS
Sbjct: 121 LLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKSR 180
Query: 181 NGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALR 240
+ + E+ K+T+I+A+IVAPSRELGMQIVRE++KLLGP ++ VQQLVGGANR RQEEAL+
Sbjct: 181 SSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEALK 240
Query: 241 KNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSG 300
KNKPAIVVGTPGRIAEIS GKLHTHGCRFLVLDE+DELLSFNFRE +HRI+EHVG+RSG
Sbjct: 241 KNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRSG 300
Query: 301 ANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPG 360
A PK + RA RQTI+VSATVPFSVIRAA+SW H+P+LVQA V PL+++ + P
Sbjct: 301 AG---PKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAP- 356
Query: 361 NLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFM 420
++ ++S ++ Q + QSLPPALKHYYC++K QHKVDTLRRCVHALDAQ+VIAFM
Sbjct: 357 --VMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAFM 414
Query: 421 NNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVA 480
N++RQLKD V+KLEARGM +AE+HGDLGKL RST LKKFKNGE++VLVTNELSARGLDVA
Sbjct: 415 NHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDVA 474
Query: 481 ECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACE 540
ECDLVVNL+LPTD++HYAHRAGRTGRLGR+GTVV++CEE +VF+VKKM+KQL +P CE
Sbjct: 475 ECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFLYCE 534
Query: 541 FTEGRLVIGKEEEKTL 556
F +G LV+ +E++ +
Sbjct: 535 FVDGELVVTEEDKAII 550
>sp|Q6H874|RH47A_ORYSJ DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp.
japonica GN=Os02g0636300 PE=2 SV=1
Length = 573
Score = 712 bits (1839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/561 (65%), Positives = 440/561 (78%), Gaps = 13/561 (2%)
Query: 3 ALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFEPT 62
AL S+R ++G+ LP S + + + V GPLTLASL +++ E
Sbjct: 14 ALASSRSCFVLGDHLPFRMLSLPRVVRFHQTAWHDIQTVEDKSGPLTLASLEVQNKVEYV 73
Query: 63 NKNKSN-----KPKKHSPIEIPKAKV-----KAVRSDGIKAAGVKKSLEIESAPFAANSF 112
K ++ KP + K KV K V+S K+A +KK+L+I+ + F+A SF
Sbjct: 74 KKERATRTGGIKPSSRASALNMKPKVSSFNAKPVKSALPKSAVLKKTLKIDESLFSAKSF 133
Query: 113 LELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKV 172
ELGLPPLL++RL +EG PTEVQSAAIP I + HD VIQSYTGSGKTLAYLLPILS++
Sbjct: 134 EELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEI 193
Query: 173 GPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANR 232
GPLK + + S K++ +EAVIVAPSRELGMQIVRE++K+LGP+DK+ VQQLVGGANR
Sbjct: 194 GPLKRPTEQDS--SDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANR 251
Query: 233 SRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIV 292
SRQEEAL+KNKP IVVGTPGRI+EISAAGKLHTH CRFLVLDE+D+LLSFN+RE MHRI+
Sbjct: 252 SRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDMHRIL 311
Query: 293 EHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLE 352
EHVGR+SG + R+ LA R+ERQTI+VSAT+PFSVIRAARSWGHDP+LV+A +V+PLE
Sbjct: 312 EHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLE 371
Query: 353 SMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALD 412
S+ P LS P + S+S SN + A SLPP+L+HYYC +K QHKVDTLRRC+HAL+
Sbjct: 372 SITVPRP-VLSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCIHALE 430
Query: 413 AQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNEL 472
AQTVIAFMNNT+ LKD VFKLEARGMKA ELHGDLGKLARST LKKFK+GE RVLVTNEL
Sbjct: 431 AQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNEL 490
Query: 473 SARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQL 532
SARGLDV ECDLV+NLDLPTDS HYAHRAGRTGRLGR+GTVV+ICEE E FVV+KM+KQL
Sbjct: 491 SARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQL 550
Query: 533 AVPIQACEFTEGRLVIGKEEE 553
AVPI+ CEFTEG+L++ KEE+
Sbjct: 551 AVPIKPCEFTEGKLLVHKEED 571
>sp|Q10PV9|RH47B_ORYSJ DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp.
japonica GN=Os03g0219700 PE=2 SV=1
Length = 573
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/561 (64%), Positives = 439/561 (78%), Gaps = 13/561 (2%)
Query: 3 ALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFEPT 62
AL S+R ++G++LPL S + + V LTLASL +++ E
Sbjct: 14 ALASSRSCFVLGDNLPLRMLSLPRAVRFHQTAWLGTETVQDKSASLTLASLEGQNKVEYG 73
Query: 63 NKNKSNK---PKKHSPIEIPKAKVKA-------VRSDGIKAAGVKKSLEIESAPFAANSF 112
K K+ + PK S K K K +S K+A VKK+L+I+ + F+A SF
Sbjct: 74 KKEKATRIGGPKPSSRASALKVKPKVSSFNSKPAKSTLPKSAVVKKTLKIDESLFSAKSF 133
Query: 113 LELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKV 172
ELGLPPLL++RL +EG + PTEVQSAAIP I + HD VIQSYTGSGKTLAYLLPILS++
Sbjct: 134 EELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPILSEI 193
Query: 173 GPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANR 232
GPLK + + +G S K++ +EAVIVAPSRELGMQIVRE++K+LGP+DK+ VQQLVGGANR
Sbjct: 194 GPLK-RPTEQDG-SDKRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVGGANR 251
Query: 233 SRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIV 292
SRQEEAL+KNKP IVVGTPGRI+EISA GKLHTHGCRFLVLDE+D+LLSFN+RE MHRI+
Sbjct: 252 SRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRIL 311
Query: 293 EHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLE 352
EHVGR+SG + R+ LA R+ERQTI+VSAT+PFSVIRAARSWGHDP+LV+A +V+PL+
Sbjct: 312 EHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLD 371
Query: 353 SMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALD 412
S+ P LS + +S SN + A SLPP+L+HYYC++K QHKVDTLRRC+HAL+
Sbjct: 372 SITVPRP-VLSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVDTLRRCIHALE 430
Query: 413 AQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNEL 472
AQTVIAFMNNT+ LKD VFKLEARGMKA ELHGDLGKLARST LKKFK+GE RVLVTNEL
Sbjct: 431 AQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNEL 490
Query: 473 SARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQL 532
SARGLDV ECDLV+NLDLPTDS HYAHRAGRTGRLGR+GTVV+ICEE E FVV+KM+KQL
Sbjct: 491 SARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQL 550
Query: 533 AVPIQACEFTEGRLVIGKEEE 553
AVPI+ CEFTEG+L++ EE+
Sbjct: 551 AVPIKPCEFTEGKLLVHNEED 571
>sp|Q5L3G9|CSHA_GEOKA DEAD-box ATP-dependent RNA helicase CshA OS=Geobacillus
kaustophilus (strain HTA426) GN=cshA PE=3 SV=1
Length = 467
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 133/413 (32%), Positives = 204/413 (49%), Gaps = 65/413 (15%)
Query: 110 NSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPIL 169
+F ELGL +++ +ER GF T +Q+ IP L+N DV+ Q+ TG+GKT A+ +PI+
Sbjct: 2 TTFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIV 61
Query: 170 SKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGG 229
KV + K + ++A++VAP+REL +Q+ E+ K +G + V + GG
Sbjct: 62 EKV-------------NVKNSAVQALVVAPTRELAIQVSEELYK-IGAVKRVRVLPIYGG 107
Query: 230 ANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
+ RQ AL+K+ P ++VGTPGRI + G L +VLDE DE+L+ F E +
Sbjct: 108 QDIERQIRALKKH-PHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIE 166
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
I+ HV AERQT++ SAT+P + R A + ++P LV+ K
Sbjct: 167 AILSHVP-----------------AERQTLLFSATMPDPIRRIAERFMNEPELVKVK--- 206
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVH 409
A + P ++ YY + K D L R +
Sbjct: 207 ------------------------------AKEMTVPNIQQYYLEVHEKKKFDILTRLLD 236
Query: 410 ALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVT 469
+ I F R++ + L RG A +HGDL + R + L+KFK G + +LV
Sbjct: 237 IQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEILVA 296
Query: 470 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEV 522
+++ARGLD++ V N D+P D Y HR GRTGR G+ G ++ E+
Sbjct: 297 TDVAARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKTGVAMTFVTPREI 349
>sp|O34750|YFML_BACSU Putative ATP-dependent RNA helicase YfmL OS=Bacillus subtilis
(strain 168) GN=yfmL PE=3 SV=1
Length = 376
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/446 (30%), Positives = 213/446 (47%), Gaps = 77/446 (17%)
Query: 103 ESAPFAAN--SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGK 160
++ PF N SF++ E GF PT VQ A I+ DV+ +S TG+GK
Sbjct: 3 QTWPFLHNAQSFIQ--------ENWNASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGK 54
Query: 161 TLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDK 220
TLAY LP+L ++ P ++ +AVI+APSREL MQI + I+ S+
Sbjct: 55 TLAYALPVLERIKP-------------EQKHPQAVILAPSRELVMQIFQVIQDWKAGSEL 101
Query: 221 KAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELL 280
+A L+GGAN +Q E L+K+ P I+VGTPGR+ E+ A KL H + +VLDE D+L+
Sbjct: 102 RAA-SLIGGANVKKQVEKLKKH-PHIIVGTPGRVFELIKAKKLKMHEVKTIVLDETDQLV 159
Query: 281 SFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDP 340
RE M +I++ R +RQ + SAT+ R +P
Sbjct: 160 LPEHRETMKQIIKTTLR-----------------DRQLLCFSATLKKETEDVLRELAQEP 202
Query: 341 LLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHK 400
+++ Q ++ +KH Y + + K
Sbjct: 203 EVLKV---------------------------------QRSKAEAGKVKHQYLICDQRDK 229
Query: 401 VDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFK 460
V L++ + L+ + F+ + L KL ++ LH + K+ R+ + F+
Sbjct: 230 VKLLQK-LSRLEGMQALVFVRDIGNLSVYAEKLAYHHVELGVLHSEAKKMERAKIIATFE 288
Query: 461 NGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEP 520
+GE +L+ +++ARGLD+ V++ D+P D Y HR+GRTGR G+ G V+S+ +
Sbjct: 289 DGEFPLLLATDIAARGLDIENLPYVIHADIP-DEDGYVHRSGRTGRAGKEGNVLSLVTKL 347
Query: 521 EVFVVKKMQKQLAVPIQACEFTEGRL 546
E +KKM K+L V + + G+L
Sbjct: 348 EESKLKKMAKKLGVELSEAVYAGGKL 373
>sp|Q5A9Z6|FAL1_CANAL ATP-dependent RNA helicase FAL1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=FAL1 PE=3 SV=1
Length = 399
Score = 172 bits (437), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 196/428 (45%), Gaps = 66/428 (15%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
+F + L P LL+ + GF P+ +QS AI I+ D + Q+ +G+GKT + + +L
Sbjct: 27 TFESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLE 86
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
+ K + +A+I++P+REL +QI + + K LG +GG
Sbjct: 87 VIDT-------------KSKECQALILSPTRELAIQI-QNVVKHLGDYMNIHTHACIGGK 132
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHR 290
N + L++ + IV GTPGR+ ++ L T + L+LDE DEL + F+E ++
Sbjct: 133 NVGEDVKKLQQGQ-QIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYE 191
Query: 291 IVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIP 350
I +H+ P S + SAT+P V+ + DP+ + K
Sbjct: 192 IYKHL----------PPSVQVVVV-------SATLPREVLEMTSKFTTDPVKILVKR--- 231
Query: 351 LESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYC-VTKLQHKVDTLRRCVH 409
D+ +K YY + K DTL
Sbjct: 232 ------------------------------DEISLSGIKQYYVQCEREDWKFDTLCDLYD 261
Query: 410 ALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVT 469
L + F N ++ +++ + +HGD+ + R + + F+ G RVL++
Sbjct: 262 NLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Query: 470 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQ 529
++ ARG+DV + LV+N DLPTD +Y HR GR+GR GR+GT +++ + +V +K+ +
Sbjct: 322 TDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFE 381
Query: 530 KQLAVPIQ 537
K + I+
Sbjct: 382 KYYSTKIK 389
>sp|Q6FLF3|DBP2_CANGA ATP-dependent RNA helicase DBP2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP2 PE=3 SV=1
Length = 544
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 148/498 (29%), Positives = 224/498 (44%), Gaps = 81/498 (16%)
Query: 30 WCHNGVRFLSQVGRHH-GPLTLASLGYKSEFEPTNKNKSNKPKKHSPIEIPKAKVKAVRS 88
+ H G+R GRH GP L ++SE + N +H +V RS
Sbjct: 39 YSHGGLR-----GRHDDGPRELIKPDWESELPNLPPFEKNFYVEH--------EVVRNRS 85
Query: 89 DGIKAAGVKKSLEI----ESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSI 144
D + A +K E+ P +F E G P +L+ ++ EGF+ PT +Q P
Sbjct: 86 DQ-EVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQGWPMA 144
Query: 145 LKNHDVVIQSYTGSGKTLAYLLPILSKVG--PLKDKSSNGNGESGKKTDIEAVIVAPSRE 202
L D+V + TGSGKTL+Y LP + + PL S G+G +++AP+RE
Sbjct: 145 LSGRDMVGIAATGSGKTLSYCLPGIVHINAQPL---LSPGDGPI-------VLVLAPTRE 194
Query: 203 LGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGK 262
L +QI +E K G S + + GG R +Q L + IV+ TPGR+ ++ AGK
Sbjct: 195 LAVQIQKECSKF-GKSSRIRNTCVYGGVPRGQQIRELIRGA-EIVIATPGRLIDMLEAGK 252
Query: 263 LHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVS 322
+ +LVLDE D +L F + +IV+ + R +RQT+M S
Sbjct: 253 TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI-----------------RPDRQTLMWS 295
Query: 323 ATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQ 382
AT P V + AR + +DP+ VQ G+L L A
Sbjct: 296 ATWPKEVQQLARDYLNDPIQVQI--------------GSLE-----------LAASHNIT 330
Query: 383 SLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFK-LEARGMKAA 441
L + + +L +DT + D ++ I +T++ D + L G A
Sbjct: 331 QLVEVVSEFEKRDRLVKHLDTA-----SQDKESKILIFASTKRTCDEITSYLRQDGWPAL 385
Query: 442 ELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRA 501
+HGD + R L +F+ G ++V +++ARG+DV + VVN D+P + Y HR
Sbjct: 386 AIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRI 445
Query: 502 GRTGRLGRRGTVVSICEE 519
GRTGR G GT +S E
Sbjct: 446 GRTGRAGATGTAISFFTE 463
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 210/468 (44%), Gaps = 71/468 (15%)
Query: 58 EFEPTNKN-KSNKPKKHSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELG 116
E+EP NK+ KP E A ++S I+ +G P SF + G
Sbjct: 175 EYEPFNKDFYEEKPSVSGMSEQEVADY--MKSLAIRVSGF-------DVPRPIKSFADCG 225
Query: 117 LPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLK 176
P L+ + ++G+ PT +Q A+P +L D++ + TGSGKT A++LP++ +
Sbjct: 226 FPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHI---- 281
Query: 177 DKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQE 236
E K+ V+ AP+REL QI E KK P + + V + GG ++ Q
Sbjct: 282 ----MDQPELEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPYNLR-VAAVYGGVSKFDQF 336
Query: 237 EALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVG 296
+ L K IV+ TPGR+ ++ L +LVLDE D + F + IV +
Sbjct: 337 KEL-KAGCEIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQI- 394
Query: 297 RRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPA 356
R +RQT++ SAT+P+ V R AR DP+ V
Sbjct: 395 ----------------RPDRQTLLFSATMPYKVERLAREILTDPIRVTV----------- 427
Query: 357 TGPGNLSGPMSGSSSNSNLQAKQADQSLP-PALKHYYCVTKLQHKVDTLRRCVHALDAQT 415
G ++N KQ LP A K + + KL +D
Sbjct: 428 -----------GQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPGMIDD----------GD 466
Query: 416 VIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSAR 475
V+ F ++ + +L RG + A LHGD + +R TL+KFK+G VLV +++AR
Sbjct: 467 VLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGVYHVLVATDVAAR 526
Query: 476 GLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLG-RRGTVVSICEEPEV 522
GLD+ VVN D+ + + HR GRTGR G + GT ++ + EV
Sbjct: 527 GLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKDGTAYTLITQKEV 574
>sp|Q0CNX1|DBP8_ASPTN ATP-dependent RNA helicase dbp8 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp8 PE=3 SV=1
Length = 527
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 142/516 (27%), Positives = 225/516 (43%), Gaps = 79/516 (15%)
Query: 46 GPLTLASLGYKSEFEPTNKNKSNKPKKHSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESA 105
P L +L + EP ++NK +P+ I K +LE+
Sbjct: 40 APTPLPTLSRIKKKEPKDENKDTSTGTDNPVLI------------------KDALEMGLQ 81
Query: 106 PFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYL 165
+SF L + P L+ L PT +Q A IP ILK D + S TGSGKT+A+
Sbjct: 82 DAGESSFKALNVAPWLIGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFA 141
Query: 166 LPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQ 225
+PIL K + I AV++ P+REL +QI + K + P K V
Sbjct: 142 VPILQKW-------------AEDPFGIFAVVLTPTRELALQIYEQFKAISAPQSMKPV-- 186
Query: 226 LVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHG---CRFLVLDEIDELLS 281
L+ G R + +P +V+ TPGR+A+ I +G+ G R +VLDE D LL+
Sbjct: 187 LITGGTDMRPQALALSQRPHVVIATPGRLADHIQTSGEDTVRGLKRVRMVVLDEADRLLA 246
Query: 282 FNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPL 341
+ + + SAL +ERQT++ +ATV
Sbjct: 247 PGPGSMLPDVETCL------------SALPPSSERQTLLFTATV---------------- 278
Query: 342 LVQAKNVIPLESMPATG---PGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQ 398
V L+SMP P ++ +G ++++ +LPP LK Y +
Sbjct: 279 ---TPEVRALKSMPRASTKPPVFVTEIEAGGTTSAGADGAAPKSTLPPTLKQTYLKVPMT 335
Query: 399 HKVDTLRRCVHALDAQT---VIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTT 455
H+ + + + D I F N+T+ L + LH L + RS+
Sbjct: 336 HR-EAFLHVLLSTDGNAGKPAIIFCNHTKTADLLERLLRRLAHRVTSLHSLLPQSERSSN 394
Query: 456 LKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVS 515
L +F+ R+LV ++++RGLD+ LVVN D+P + Y HR GRT R GRRG V+
Sbjct: 395 LARFRASAARILVATDVASRGLDIPSVALVVNYDVPRNPDDYVHRVGRTARAGRRGEAVT 454
Query: 516 ICEEPEVFVVKKMQKQLAVPIQACE----FTEGRLV 547
+ + +V +V +++++ ++ EGR+V
Sbjct: 455 LVGQRDVQLVLAIEERVGRQMEEWSEEGVSVEGRVV 490
>sp|Q9C718|RH20_ARATH DEAD-box ATP-dependent RNA helicase 20 OS=Arabidopsis thaliana
GN=RH20 PE=1 SV=1
Length = 501
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 197/418 (47%), Gaps = 58/418 (13%)
Query: 99 SLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGS 158
++E + P SF ++G P +LE +++ GF PT +QS P +K D++ + TGS
Sbjct: 88 TVEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGS 147
Query: 159 GKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPS 218
GKTL+YLLP + V + ++G+G +++AP+REL +QI +E K G S
Sbjct: 148 GKTLSYLLPAIVHVN-AQPMLAHGDGPI-------VLVLAPTRELAVQIQQEASKF-GSS 198
Query: 219 DKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDE 278
K + GG + Q L+K IV+ TPGR+ ++ + + +LVLDE D
Sbjct: 199 SKIKTTCIYGGVPKGPQVRDLQKGV-EIVIATPGRLIDMMESNNTNLRRVTYLVLDEADR 257
Query: 279 LLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGH 338
+L F + +IV H+ R +RQT+ SAT P V + ++ + +
Sbjct: 258 MLDMGFDPQIRKIVSHI-----------------RPDRQTLYWSATWPKEVEQLSKKFLY 300
Query: 339 DPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQ 398
+P V + GSS +L+A +A + + + KL
Sbjct: 301 NPYKV----------------------IIGSS---DLKANRAIRQIVDVISESQKYNKLV 335
Query: 399 HKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKK 458
++ + +D ++ F++ + +L G A +HGD + R L +
Sbjct: 336 KLLEDI------MDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSE 389
Query: 459 FKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSI 516
F++G+ ++ +++ARGLDV + V+N D P Y HR GRTGR G +GT +
Sbjct: 390 FRSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 447
>sp|Q55BR9|DDX49_DICDI Probable ATP-dependent RNA helicase ddx49 OS=Dictyostelium
discoideum GN=ddx49 PE=3 SV=1
Length = 508
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 201/421 (47%), Gaps = 64/421 (15%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
+F ELGL L+ ++ GF P+ +Q+ IP ILK D++ + TGSGKT ++ +PIL+
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
++ S + G + AVI+ P+REL +QI + + P + ++GG
Sbjct: 65 QL------SEDPYG-------VFAVILTPTRELAVQIGEQFNAIGAPMNVNC-SVVIGGI 110
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
+ Q L K +P I+V TPGR+A ++ K+ C+FLVLDE D LL +F +
Sbjct: 111 DNVTQALILDK-RPHIIVATPGRLASHLNNGLKIALKFCKFLVLDEADRLLGEDFELEIA 169
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
I+EH+ P E +RQT++ SAT+ KN+
Sbjct: 170 SILEHLP------PPE---------KRQTLLFSATM-------------------TKNLT 195
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVH 409
L+S+ P S ++ KQ +P K Y V L+
Sbjct: 196 KLDSIALNKPFIFE---DNSKYDTVDTLKQEYIYMPAPTKDCYLVYILKKH--------- 243
Query: 410 ALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVT 469
+ + I F+NN ++ L + + LH L + +R LK FK+G+V+VLV
Sbjct: 244 --EGSSAIVFVNNCYAVEAVKGMLNKLDIPSVSLHSFLDQKSRLAALKTFKSGKVKVLVA 301
Query: 470 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQ 529
++++RGLD+ + +V+N L S Y HR GRT R GR G +S +V ++K ++
Sbjct: 302 TDVASRGLDIPDVQIVINYKLSNSSKDYIHRVGRTARFGRSGRAISFITPHDVSLIKGIE 361
Query: 530 K 530
+
Sbjct: 362 E 362
>sp|Q4I662|DBP8_GIBZE ATP-dependent RNA helicase DBP8 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP8 PE=3
SV=1
Length = 547
Score = 168 bits (425), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/444 (31%), Positives = 203/444 (45%), Gaps = 63/444 (14%)
Query: 105 APFAANS-FLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLA 163
AP N+ F L + P L++ LE PT +Q IP ILK D + S TGSGKT+A
Sbjct: 110 APTDPNTTFSALDVRPWLVQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMA 169
Query: 164 YLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAV 223
+ +PIL K S T I AV++ P+REL +QI + K + P KA+
Sbjct: 170 FAVPILQKW-------------SEDPTAIFAVVLTPTRELALQIFEQFKAISSPQSLKAI 216
Query: 224 QQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHG---CRFLVLDEIDEL 279
LV G + R + +P +++ TPGR+A+ I +G+ G R++VLDE D L
Sbjct: 217 --LVTGGSDMRTQAIEIGKRPHVIIATPGRLADHIRTSGEDTICGLRRVRYVVLDEADRL 274
Query: 280 LSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHD 339
L+ +M VE E S L ERQT++ +AT+
Sbjct: 275 LNATGPGSMLPDVE-----------ECLSVLPPATERQTLLFTATI-------------- 309
Query: 340 PLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYC---VTK 396
V L+ MP PG P+ ++ A +P LK Y VT
Sbjct: 310 -----TPEVRALKDMP-IKPGK--QPVFVCEVDTQTLA------IPATLKQMYIKVPVTH 355
Query: 397 LQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTL 456
+H + T +D +TVI F N T L + LH L + R L
Sbjct: 356 KEHYLHTFLLTEANVD-KTVILFCNRTSTADYLHHLLRMLEHRVTSLHSKLPQRQRIDNL 414
Query: 457 KKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSI 516
+F+ R+LV +++ARGLD+ E LV+N DLP D Y HR GRT R GR+G VS
Sbjct: 415 ARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGRKGEAVSF 474
Query: 517 CEEPEVFVVKKMQKQLAVPIQACE 540
+ +V + ++K++ ++A E
Sbjct: 475 VGQRDVELALTIEKRVGRDMEAWE 498
>sp|A6QXC1|DBP3_AJECN ATP-dependent RNA helicase DBP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=DBP3 PE=3 SV=1
Length = 487
Score = 167 bits (423), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/392 (31%), Positives = 196/392 (50%), Gaps = 51/392 (13%)
Query: 128 EGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESG 187
E F+ PT +QS P + DV+ + TGSGKTLA+ +P + KV + N + S
Sbjct: 88 EHFSKPTPIQSVTWPYLFAGRDVIGVAETGSGKTLAFGVPCIRKVLEI-----NASHSSF 142
Query: 188 KKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIV 247
+ I AVI+ P+REL MQI ++ K + + + GGA++ Q AL+K +++
Sbjct: 143 R---ISAVIITPTRELAMQIHDQLVKFT--PNGVGLACIYGGASKDDQRRALKK--ASVI 195
Query: 248 VGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPK 307
V TPGR+ + + L+ ++LVLDE D +L F + + IV
Sbjct: 196 VATPGRLKDFHSDESLNLKKVKYLVLDEADRMLDKGFEQDIKDIV--------------- 240
Query: 308 SALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMS 367
SA+ +RQT+M +AT P SV + A ++ +P+ V T G+LS
Sbjct: 241 SAMPSSRKRQTVMFTATWPISVRKLATTFMKEPVTV-------------TIGGDLS---- 283
Query: 368 GSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLK 427
S +N + KQ + + P K ++L ++ +R +A+D V+ F ++
Sbjct: 284 -SDIRANTRIKQIVEVVKPENKE----SRLLSLLNQYQRGRNAMDK--VLVFCLYKKEAT 336
Query: 428 DAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVN 487
+ ++G K A +HGD+ + R +L FK+G V VLV +++ARGLD+ LV+N
Sbjct: 337 RIERFIRSKGFKVAGIHGDMNQTERFNSLDAFKSGSVPVLVATDVAARGLDIPAVKLVLN 396
Query: 488 LDLPTDSIHYAHRAGRTGRLGRRGTVVSICEE 519
+ P Y HR GRTGR G G +++ E
Sbjct: 397 VTFPLTVEDYVHRIGRTGRAGSDGLAITMFTE 428
>sp|Q1E0Z3|DBP8_COCIM ATP-dependent RNA helicase DBP8 OS=Coccidioides immitis (strain RS)
GN=DBP8 PE=3 SV=1
Length = 536
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 211/456 (46%), Gaps = 76/456 (16%)
Query: 110 NSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPIL 169
+SF LGL P L+ L PT +Q A IP ILK D + S TGSGKT+A+ PIL
Sbjct: 106 SSFSSLGLAPWLVGSLSAMAIRRPTAIQRACIPEILKGRDCIGGSRTGSGKTVAFAAPIL 165
Query: 170 SKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGG 229
+ S I AV++ P+REL +QI + K + P K V L+ G
Sbjct: 166 HRW-------------SEDPFGIFAVVLTPTRELALQIFEQFKAISAPQSLKPV--LITG 210
Query: 230 ANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHG---CRFLVLDEIDELLSFNFR 285
+ R + +P +V+ TPGR+A+ I +G+ +G R +VLDE D LL+
Sbjct: 211 GSEMRPQAIALSTRPHVVIATPGRLADHIKTSGQDTIYGLNRVRMVVLDEADRLLA---- 266
Query: 286 EAMHRIVEHVGRRSGANPREPK-----SALAMRAERQTIMVSATVPFSVIRAARSWGHDP 340
SG P SAL RQT++ +ATV V RA +S
Sbjct: 267 -------------SGPGSMLPDVETCLSALPPSTSRQTLLFTATVTQEV-RALKS----- 307
Query: 341 LLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHK 400
+ + K+ +P+ ++ S+ +N ++PP LK Y + H+
Sbjct: 308 -MPRPKDRLPIF-------------VTEISTENN-------TTIPPTLKQCYLQVPMTHR 346
Query: 401 VDTLRRCVHALDAQT---VIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLK 457
+ + + DA + I F N T+ L G + LH L + R++ L
Sbjct: 347 -EAFLHVLLSTDANSSKPAIIFCNRTKTADLLDRLLRRLGHRVTSLHSLLPQSERTSNLA 405
Query: 458 KFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSIC 517
+F+ R+LV +++ARGLD+ LVVN D+P + Y HR GRT R GR G +++
Sbjct: 406 RFRASAARLLVATDVAARGLDIPSVGLVVNFDVPRNPDDYIHRVGRTARAGREGEAITLV 465
Query: 518 EEPEVFVVKKMQKQLAVPIQACE----FTEGRLVIG 549
+ +V +V +++++ + A E EGR+V G
Sbjct: 466 GQRDVQLVLAIEERVGRQMVAWEEEGVSIEGRIVRG 501
>sp|A1D405|RRP3_NEOFI ATP-dependent rRNA helicase rrp3 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=rrp3
PE=3 SV=1
Length = 472
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 129/442 (29%), Positives = 202/442 (45%), Gaps = 65/442 (14%)
Query: 108 AANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLP 167
A SF +LG+ L E E G+ PT +Q+ +IP L+ D++ + TGSGKT A+ LP
Sbjct: 50 APKSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALP 109
Query: 168 ILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLV 227
IL L +K + G +I+AP+REL QI + + L G + +V
Sbjct: 110 ILQ---ALMEKPQSFFG----------LILAPTRELAFQISKSFESL-GSTINVRCAVIV 155
Query: 228 GGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFRE 286
GG + Q AL K KP I+V TPGR+ + + ++LV+DE D LL +F
Sbjct: 156 GGMDMVSQSIALGK-KPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLDMDFGP 214
Query: 287 AMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAK 346
+ +I++ + R ER+T + SAT+ V R+
Sbjct: 215 LLDKILKVLPR-----------------ERRTFLFSATMSSKVESLQRA----------- 246
Query: 347 NVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRR 406
+LS P+ S S++ Q L Y +HK L
Sbjct: 247 --------------SLSNPLRVSVSSNKYQTVST-------LLQSYLFLPHKHKDIYLVY 285
Query: 407 CVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRV 466
++ Q+ I F + + F L + G A LHG L + AR L KF++ +
Sbjct: 286 LLNEFVGQSAIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 467 LVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVK 526
LV +++ARGLD+ D+V+N DLPTDS Y HR GRT R G+ G +S + +V +
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYDVEIWL 405
Query: 527 KMQKQLAVPIQACEFTEGRLVI 548
+++ L ++ E + +++
Sbjct: 406 RIEGALGKKLKEYELEKDEVMV 427
>sp|Q5B5E7|RRP3_EMENI ATP-dependent rRNA helicase rrp3 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rrp3 PE=3 SV=1
Length = 465
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 130/429 (30%), Positives = 193/429 (44%), Gaps = 66/429 (15%)
Query: 106 PFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYL 165
P A SF ELG+ L E E G+ PT +QS AIP L+ DV+ + TGSGKT A+
Sbjct: 42 PAPAKSFKELGIIDQLCEACENMGYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFA 101
Query: 166 LPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQ 225
LP+L L + G +++AP+REL QI + + L G +
Sbjct: 102 LPMLQ---ALMEAPQTLFG----------LVLAPTRELAYQISQAFETL-GSTIGVRCAV 147
Query: 226 LVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNF 284
+VGG + Q AL K KP I+V TPGR+ + + ++L +DE D LL +F
Sbjct: 148 IVGGMDMVAQSIALGK-KPHIIVATPGRLLDHLENTKGFSLRNLKYLAIDEADRLLDMDF 206
Query: 285 REAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQ 344
E++ +I+ + R R T + SAT+ V R+
Sbjct: 207 GESLDKIIRILPR-----------------TRHTYLFSATMSTKVESLQRA--------- 240
Query: 345 AKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTL 404
+LS P+ S S+ Q++ Y C+ +HK L
Sbjct: 241 ----------------SLSNPVRVSVSSKY-------QTVSTLQSSYICIPH-KHKNLYL 276
Query: 405 RRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEV 464
++ Q+ I F + + F L A G A LHG L + AR L KF++
Sbjct: 277 VYLLNEFAGQSAIIFTTTVHETQRVAFMLRALGFGAIPLHGQLSQSARLGALGKFRSRSR 336
Query: 465 RVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFV 524
+LV +++ARGLD+ D+V N DLP DS Y HR GRT R G+ G +S + +V V
Sbjct: 337 DILVATDVAARGLDIPSVDVVFNFDLPMDSKTYIHRVGRTARAGKSGVAISFVTQYDVEV 396
Query: 525 VKKMQKQLA 533
+++ L+
Sbjct: 397 WLRIEHALS 405
>sp|A1CR32|RRP3_ASPCL ATP-dependent rRNA helicase rrp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=rrp3 PE=3 SV=1
Length = 473
Score = 166 bits (420), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 215/465 (46%), Gaps = 68/465 (14%)
Query: 88 SDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKN 147
SD +A +S E + AP SF +LG+ L E G+ PT +Q+ +IP L++
Sbjct: 34 SDNAEAQDGPESSETKPAP---KSFKDLGIIDQLCEACATMGYKAPTPIQAESIPLALQD 90
Query: 148 HDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQI 207
D++ + TGSGKT A+ LPIL L DK + G +++AP+REL QI
Sbjct: 91 RDLIGLAETGSGKTAAFALPILQ---ALMDKPQSFFG----------LVLAPTRELAFQI 137
Query: 208 VREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTH 266
+ + L G + +VGG + Q AL K KP I+V TPGR+ + +
Sbjct: 138 SQSFEAL-GSTINVRCAVIVGGMDMVSQSIALGK-KPHIIVATPGRLLDHLENTKGFSLR 195
Query: 267 GCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVP 326
++LV+DE D LL +F + +I++ + R ER+T + SAT+
Sbjct: 196 TLKYLVMDEADRLLDMDFGPLLDKILKILPR-----------------ERRTFLFSATMS 238
Query: 327 FSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPP 386
V R+ +LS P+ S S++ Q ++
Sbjct: 239 SKVESLQRA-------------------------SLSNPLRVSVSSNKYQ------TVST 267
Query: 387 ALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGD 446
L+ Y + +HK L ++ Q+ I F + + F L A G A LHG
Sbjct: 268 LLQSYRFIPH-KHKDIYLVYLLNEFVGQSAIIFTRTVHETQRISFLLRALGFGAIPLHGQ 326
Query: 447 LGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGR 506
L + +R L KF++ +LV +++ARGLD+ D+V+N DLPTDS Y HR GRT R
Sbjct: 327 LSQSSRLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTAR 386
Query: 507 LGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACEFTEGRLVIGKE 551
G+ G +S + +V + +++ L + + + +++ E
Sbjct: 387 AGKSGVAISFVTQYDVEIWLRIEGALGKKLDEYDLEKDEVMVLAE 431
>sp|P21693|DBPA_ECOLI ATP-independent RNA helicase DbpA OS=Escherichia coli (strain K12)
GN=dbpA PE=1 SV=2
Length = 457
Score = 166 bits (419), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 179/405 (44%), Gaps = 65/405 (16%)
Query: 117 LPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLK 176
LPP L L G+ T VQ+AA+P+IL DV +Q+ TGSGKT A+ L +L ++
Sbjct: 10 LPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQI---- 65
Query: 177 DKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQE 236
+A+++ P+REL Q+ E+++L + L GG Q
Sbjct: 66 ---------DASLFQTQALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQR 116
Query: 237 EALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVG 296
++L ++ P I+V TPGR+ + G + LV+DE D +L F +A+ ++
Sbjct: 117 DSL-QHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFA- 174
Query: 297 RRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPA 356
A RQT++ SAT P ++ + DPL ++ +
Sbjct: 175 ----------------PASRQTLLFSATWPEAIAAISGRVQRDPLAIEIDST-------- 210
Query: 357 TGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTV 416
+LPP + +Y T + K+ L+R + +
Sbjct: 211 -------------------------DALPPIEQQFY-ETSSKGKIPLLQRLLSLHQPSSC 244
Query: 417 IAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARG 476
+ F N + + L G A LHGDL + R TL +F NG RVLV +++ARG
Sbjct: 245 VVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARG 304
Query: 477 LDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPE 521
LD+ +LVVN +L D + HR GRT R G G +S C E
Sbjct: 305 LDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEE 349
>sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rrp3
PE=3 SV=1
Length = 472
Score = 166 bits (419), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 132/450 (29%), Positives = 205/450 (45%), Gaps = 66/450 (14%)
Query: 103 ESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTL 162
ES P A SF +LG+ L E E G+ PT +Q+ +IP L+ D++ + TGSGKT
Sbjct: 46 ESRP-APKSFKDLGIIDQLCEACETMGYKAPTPIQAESIPLALQGRDLIGLAETGSGKTA 104
Query: 163 AYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKA 222
A+ LPIL + N +S +I+AP+REL QI + + L G +
Sbjct: 105 AFALPILQALME--------NPQS-----FFGLILAPTRELAFQISKSFESL-GSTINVR 150
Query: 223 VQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLS 281
+VGG + Q AL K KP I+V TPGR+ + + ++LV+DE D LL
Sbjct: 151 CAVIVGGMDMVSQSIALGK-KPHIIVATPGRLLDHLENTKGFSLRTLKYLVMDEADRLLD 209
Query: 282 FNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPL 341
+F + +I++ + R ER+T + SAT+ V R+
Sbjct: 210 MDFGPLLDKILKVLPR-----------------ERRTFLFSATMSSKVESLQRA------ 246
Query: 342 LVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKV 401
+LS P+ S S++ Q L Y +HK
Sbjct: 247 -------------------SLSNPLRVSVSSNKYQTVST-------LLQSYLFLPHKHKD 280
Query: 402 DTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKN 461
L ++ Q+ I F + + F L + G A LHG L + AR L KF++
Sbjct: 281 IYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRS 340
Query: 462 GEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPE 521
+LV +++ARGLD+ D+V+N DLPTDS Y HR GRT R G+ G +S + +
Sbjct: 341 RSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYD 400
Query: 522 VFVVKKMQKQLAVPIQACEFTEGRLVIGKE 551
V + +++ L ++ E + +++ E
Sbjct: 401 VEIWLRIEGALGKKLKEYELEKDEVMVLAE 430
>sp|A4R8G3|DBP8_MAGO7 ATP-dependent RNA helicase DBP8 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=DBP8 PE=3 SV=3
Length = 579
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 143/456 (31%), Positives = 219/456 (48%), Gaps = 65/456 (14%)
Query: 92 KAAGVKKSLEIESAPFAANSFLE-LGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDV 150
+AAG K+ L AP N+ E LG+ P L++ L PT +Q I ILK D
Sbjct: 133 QAAGKKRIL----APTDQNTTFESLGVEPWLVQSLANLAVKRPTGIQKGCIGEILKGRDC 188
Query: 151 VIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVRE 210
+ S TGSGKT+A+ +PIL K +D S+ I AV++ +REL +QI +
Sbjct: 189 IGGSRTGSGKTIAFAVPILQKYA--QDPSA-----------IFAVVLTATRELALQIYEQ 235
Query: 211 IKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCR 269
K + P KA ++GG++ Q AL +P+IV+ TPGR+A+ I ++G+ G R
Sbjct: 236 FKAVSSPHVLKAAL-IIGGSDMRSQAIAL-AQRPSIVIATPGRLADHIRSSGEDTICGLR 293
Query: 270 ---FLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVP 326
FLVLDE D LLS +M + H+ E + L +RQT++ +ATV
Sbjct: 294 RVKFLVLDEADRLLSSKGPGSM---LPHID--------ECMAVLPPPEDRQTLLFTATV- 341
Query: 327 FSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPP 386
V L+ MP T PG P+ ++ + A +P
Sbjct: 342 ------------------TPEVRALKEMP-TRPGK--EPVHVCEVDTQVLA------IPD 374
Query: 387 ALKHYYCVTKLQHKVDTLRRCV--HALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELH 444
+LK Y + H+ L + A +++I F+N T + L + LH
Sbjct: 375 SLKQSYIQLTVTHREHFLHEFLLTAANTERSIIIFVNRTSTAQFLHHLLRLLDHRVTSLH 434
Query: 445 GDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRT 504
L + R L +F+ R+LV ++++RGLD+ E +VVN DLP D Y HR GRT
Sbjct: 435 SKLRQQQRIDNLGRFRASAARILVATDVASRGLDIPEVSVVVNYDLPRDPDDYIHRVGRT 494
Query: 505 GRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACE 540
R GR+G V+ + +V +V ++K++ P++ E
Sbjct: 495 ARAGRKGEAVNFVGQRDVELVLAIEKRVGRPMEKWE 530
>sp|Q2H1Q8|RRP3_CHAGB ATP-dependent rRNA helicase RRP3 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=RRP3 PE=3 SV=1
Length = 493
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 131/433 (30%), Positives = 193/433 (44%), Gaps = 65/433 (15%)
Query: 103 ESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTL 162
ES A +F +LG+ L + + G+ PT +Q +IP L++ D++ + TGSGKT
Sbjct: 58 ESEEPAPKTFQDLGIVDSLCDACKELGWKKPTPIQQESIPLALQDRDIIGLAETGSGKTG 117
Query: 163 AYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKA 222
A+ LPIL L DK + A+++AP+REL QI + + L G
Sbjct: 118 AFALPILQA---LLDKPQP----------LFALVLAPTRELAAQIAQSFEAL-GSLISLR 163
Query: 223 VQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLS 281
++GG + +Q AL K KP +VV TPGR+ + + R+LV+DE D LL
Sbjct: 164 CALILGGLDMVQQAIALGK-KPHVVVATPGRLLDHLEKTKGFSLRNLRYLVMDEADRLLD 222
Query: 282 FNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPL 341
+F + +I++ + R ER+T + SAT+ V R+ DPL
Sbjct: 223 MDFGPILDKILKFLPR-----------------ERRTFLFSATMSSKVESLQRACLRDPL 265
Query: 342 LVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKV 401
V S S+S Q L Y HK
Sbjct: 266 KV-------------------------SISSSKYQTVST-------LVQNYVFIPHTHKD 293
Query: 402 DTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKN 461
L + QT+I F + + L GM A LHG L + AR L KF+
Sbjct: 294 TYLIYLCNEFAGQTIIIFTRTVIETQRIAILLRTLGMGAIPLHGGLSQSARLGALNKFRA 353
Query: 462 GEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPE 521
G +LV +++ARGLD+ D V+NLDLP DS Y HR GRT R GR G +S + +
Sbjct: 354 GSRDILVATDVAARGLDIPNVDCVLNLDLPGDSKTYVHRVGRTARAGRSGHAISFVTQYD 413
Query: 522 VFVVKKMQKQLAV 534
+ + +++ L
Sbjct: 414 LELWLRIEAALGT 426
>sp|Q1EB31|DBP4_COCIM ATP-dependent RNA helicase DBP4 OS=Coccidioides immitis (strain RS)
GN=DBP4 PE=3 SV=1
Length = 806
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 200/432 (46%), Gaps = 63/432 (14%)
Query: 109 ANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPI 168
A SF EL L L+ L F T++QS A+P +K D++ + TGSGKTLA+L+P+
Sbjct: 47 AESFSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPV 106
Query: 169 LSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVG 228
L + + +G G A+I++P+REL +QI ++K+ G + ++G
Sbjct: 107 LENLYRKQWTEYDGLG---------ALILSPTRELAIQIFEVLRKI-GRYHTFSAGLVIG 156
Query: 229 GANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREA 287
G +S QEE R + I+V TPGR+ + + T + LVLDE D ++ F+
Sbjct: 157 G--KSLQEEQERLGRMNILVCTPGRMLQHMDQTAAFDTAHIQMLVLDEADRIMDMGFQST 214
Query: 288 MHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKN 347
+ IVEH+ PK ERQT++ SAT Q K
Sbjct: 215 VDAIVEHL----------PK-------ERQTMLFSAT-------------------QTKK 238
Query: 348 VIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRC 407
V L + P +S + SS+ P +L+ +Y VT L K+DTL
Sbjct: 239 VSDLARLSLRDPEYISVHEAASSAT------------PASLQQHYVVTPLPEKLDTLWSF 286
Query: 408 VHALDAQTVIAFMNNTRQLK--DAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVR 465
+ ++ F ++++Q++ F+ G+ LHG + AR KF +
Sbjct: 287 IRNTLKSKILVFFSSSKQVRFVYEAFRHMQPGIPLLHLHGRQKQSARIDITSKFSRAKYS 346
Query: 466 VLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVV 525
L + +++ARGLD D V+ LD P D+ Y HR GRT R R G V + E +
Sbjct: 347 CLFSTDVAARGLDFPAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEEGM 406
Query: 526 KKMQKQLAVPIQ 537
K +Q +PI+
Sbjct: 407 LKRLEQKKIPIE 418
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 189/416 (45%), Gaps = 65/416 (15%)
Query: 108 AANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLP 167
A SF ELGL L E + G+ PT +Q+ AIP L+ D++ + TGSGKT A+ LP
Sbjct: 50 APKSFKELGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALP 109
Query: 168 ILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLV 227
IL L DK S+ G +++AP+REL QI + + L G + LV
Sbjct: 110 ILQ---ALMDKPSSFFG----------LVLAPTRELAYQISQAFEGL-GSTISVRSTVLV 155
Query: 228 GGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFRE 286
GG + Q AL K KP I+V TPGR+ + + ++LV+DE D LL +F
Sbjct: 156 GGMDMVSQSIALGK-KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGP 214
Query: 287 AMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAK 346
+ +I++ + R ER+T + SAT+ V R+ +PL V
Sbjct: 215 ILDKILKVLPR-----------------ERRTYLFSATMSSKVESLQRASLQNPLRV--- 254
Query: 347 NVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRR 406
+ S+S Q L+ Y +HK L
Sbjct: 255 ----------------------AVSSSKFQTVST-------LQQSYIFIPHKHKDLYLVY 285
Query: 407 CVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRV 466
++ Q+ I F + + F L G A LHG L + AR L KF++ +
Sbjct: 286 LLNEFVGQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFRSRSRDI 345
Query: 467 LVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEV 522
LV +++ARGLD+ D+V+N DLP DS + HR GRT R G+ G +S + +V
Sbjct: 346 LVATDVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQYDV 401
>sp|Q5N7W4|RH30_ORYSJ DEAD-box ATP-dependent RNA helicase 30 OS=Oryza sativa subsp.
japonica GN=Os01g0911100 PE=2 SV=2
Length = 666
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/418 (28%), Positives = 184/418 (44%), Gaps = 58/418 (13%)
Query: 99 SLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGS 158
++E P F E P ++ + + GF PT +QS P LK D++ + TGS
Sbjct: 240 TVEGHDVPKPVRYFQEANFPDYCMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGS 299
Query: 159 GKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPS 218
GKTL+YLLP L VG + + G+G +I+AP+REL +QI +E K G
Sbjct: 300 GKTLSYLLPGLVHVG-AQPRLEQGDGPI-------VLILAPTRELAVQIQQESGKF-GSY 350
Query: 219 DKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDE 278
+ + GGA + Q LR+ IV+ TPGR+ ++ G + +LVLDE D
Sbjct: 351 SRTRSTCIYGGAPKGPQIRDLRRGV-EIVIATPGRLIDMLEGGHTNLRRVTYLVLDEADR 409
Query: 279 LLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGH 338
+L F + +IV + R +RQT+ SAT P V AR +
Sbjct: 410 MLDMGFEPQIRKIVAQI-----------------RPDRQTLYWSATWPREVESLARQFLQ 452
Query: 339 DPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQ 398
+P V + GS +L+A + Q + + + +L
Sbjct: 453 NPYKV----------------------IIGSP---DLKANHSIQQIIEVISEHEKYPRLS 487
Query: 399 HKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKK 458
+ L +D ++ F + +L G A +HGD + R L +
Sbjct: 488 KLLSDL------MDGSRILIFFQTKKDCDKVTRQLRMDGWPALSIHGDKAQAERDYVLAE 541
Query: 459 FKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSI 516
FK+G+ ++ +++ARGLDV + V+N D PT Y HR GRTGR G GT +
Sbjct: 542 FKSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTF 599
>sp|Q5AWA6|DBP3_EMENI ATP-dependent RNA helicase dbp3 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp3
PE=3 SV=2
Length = 488
Score = 163 bits (412), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 127/395 (32%), Positives = 187/395 (47%), Gaps = 55/395 (13%)
Query: 128 EGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESG 187
+GF PT +QSA P + DV+ + TGSGKTLA+ LP L KV LK K
Sbjct: 91 DGFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQ-------- 142
Query: 188 KKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIV 247
K AV+++P+REL MQI ++ K D + V + GG + Q EAL+ A+V
Sbjct: 143 KSCRPLAVVISPTRELAMQIYDQLVKFAEKVDIQ-VACIFGGVKKDEQREALKSA--AVV 199
Query: 248 VGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPK 307
V TPGR+ ++ G L ++LVLDE D +L F + + I+ + P
Sbjct: 200 VATPGRLKDLQNDGSLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPM----------PV 249
Query: 308 SALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMS 367
S +RQT+M +AT P V A ++ P+ V + P+ P
Sbjct: 250 S------KRQTVMFTATWPPIVRNLASTFMTSPVTVT------IGGDPSADP-------- 289
Query: 368 GSSSNSNLQAKQADQSLPPALKHYYCVTKL-QHKVDTLRRCVHALDAQTVIAFMNNTRQL 426
+N + KQ + + P K V L +H+ T + V+AF ++
Sbjct: 290 ----RANSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDK---------VLAFCLYKKEA 336
Query: 427 KDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVV 486
L +G K A +HGDL + R +L+ FK+G VLV +++ARGLD+ LVV
Sbjct: 337 MRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLDIPHVKLVV 396
Query: 487 NLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPE 521
N+ P Y HR GRTGR G G +++ E +
Sbjct: 397 NVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETD 431
>sp|Q0CL13|DBP3_ASPTN ATP-dependent RNA helicase dbp3 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=dbp3 PE=3 SV=1
Length = 493
Score = 162 bits (411), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 127/401 (31%), Positives = 187/401 (46%), Gaps = 55/401 (13%)
Query: 121 LLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSS 180
L E+L F PT +QSA P + DV+ + TGSGKTLA+ LP L K
Sbjct: 91 LYEQLN--SFKSPTSIQSATWPLLFGGRDVIGIAETGSGKTLAFGLPCLKK-------IE 141
Query: 181 NGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALR 240
+ + K AVI++P+REL MQI +++K GP K V + GG + Q E L+
Sbjct: 142 DSKKKKSKPYQPMAVIISPTRELAMQIHDQLQKFAGPVGAK-VACIFGGVRKDEQREVLK 200
Query: 241 KNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSG 300
IVV TPGR+ ++ G + R+LVLDE D +L F + + I++ +
Sbjct: 201 TAN--IVVATPGRLKDLQNDGSVDLGKVRYLVLDEADRMLDKGFEQDIKDIIQPM----- 253
Query: 301 ANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPG 360
P S +RQT+M +AT P V A ++ P+ V + P+ P
Sbjct: 254 -----PVS------KRQTVMFTATWPPVVRELASTFMSSPVTVT------IGGDPSADP- 295
Query: 361 NLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFM 420
+N + KQ + + P K V L+ H A+ V+AF
Sbjct: 296 -----------RANTRIKQVVEVVKPHEKEGRLVQLLKQ---------HQRGAEKVLAFC 335
Query: 421 NNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVA 480
++ L++RG K A +HGDL + R +L FK G VLV +++ARGLD+
Sbjct: 336 LYKKEATRIERFLQSRGFKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARGLDIP 395
Query: 481 ECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPE 521
LV+N+ P Y HR GRTGR G G +++ E +
Sbjct: 396 AVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTETD 436
>sp|A2RB17|RRP3_ASPNC ATP-dependent rRNA helicase rrp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=rrp3 PE=3 SV=1
Length = 467
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 195/426 (45%), Gaps = 65/426 (15%)
Query: 109 ANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPI 168
+ +F ELG+ L E E G+ PT +Q +IP LK D++ + TGSGKT A+ LPI
Sbjct: 47 SKTFKELGIIEQLCEACETMGYKAPTPIQRESIPLALKGRDLIGLAETGSGKTAAFALPI 106
Query: 169 LSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVG 228
L L +K G +++AP+REL QI + + L G S +VG
Sbjct: 107 LQ---ALMEKPQPFFG----------LVLAPTRELAYQISKSFESL-GASMGVRSCVIVG 152
Query: 229 GANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREA 287
G + Q +L K KP I+V TPGR+ + + ++LV+DE D LL +F
Sbjct: 153 GMDMVSQSISLGK-KPHIIVATPGRLLDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPL 211
Query: 288 MHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKN 347
+ +I++ + R ER+T + SAT+ V R+
Sbjct: 212 LDKILKVLPR-----------------ERRTFLFSATMSSKVESLQRA------------ 242
Query: 348 VIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRC 407
+LS P+ S S S Q ++ L+ Y + + +HK L
Sbjct: 243 -------------SLSNPLRVSVSTSKYQ------TVSTLLQSYLFIPQ-KHKDLYLVYL 282
Query: 408 VHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVL 467
++ Q+ I F + + F L A G A LHG L + AR L KF+ +L
Sbjct: 283 LNEFAGQSTIIFTRTVNETQRLAFLLRALGFGAIPLHGQLSQSARLGALGKFRARSRNIL 342
Query: 468 VTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKK 527
V +++ARGLD+ D+V+N DLP DS Y HR GRT R G+ G +S + +V V +
Sbjct: 343 VATDVAARGLDIPSVDVVLNFDLPGDSPSYVHRVGRTARAGKSGLAISFVAQYDVEVWLR 402
Query: 528 MQKQLA 533
++ L
Sbjct: 403 IEGALG 408
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 121/418 (28%), Positives = 189/418 (45%), Gaps = 58/418 (13%)
Query: 99 SLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGS 158
++E P F ++G P +L+ + + GF PT +QS P L+ D++ + TGS
Sbjct: 80 TVEGRDVPKPVREFRDVGFPEYVLQEITKAGFVEPTPIQSQGWPMALRGRDLIGIAETGS 139
Query: 159 GKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPS 218
GKTLAYLLP + V + + G+G +++AP+REL +QI +E K G S
Sbjct: 140 GKTLAYLLPAIVHVN-AQPILAPGDGPI-------VLVLAPTRELAVQIQQEATK-FGAS 190
Query: 219 DKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDE 278
K + GG + Q L+K IV+ TPGR+ ++ + + +LVLDE D
Sbjct: 191 SKIKSTCIYGGVPKGPQVRDLQKGV-EIVIATPGRLIDMIESHHTNLRRVTYLVLDEADR 249
Query: 279 LLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGH 338
+L F + +IV + R +RQT+ SAT P V + AR++
Sbjct: 250 MLDMGFEPQIKKIVSQI-----------------RPDRQTLYWSATWPKEVEQLARNFLF 292
Query: 339 DPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQ 398
DP K +I E + A N Q + L + K+ V L+
Sbjct: 293 DPY----KVIIGSEELKA-----------------NHAISQHVEILSESQKYNKLVNLLE 331
Query: 399 HKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKK 458
+D ++ FM+ + +L G A +HGD + R L +
Sbjct: 332 ----------DIMDGSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSE 381
Query: 459 FKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSI 516
FK+G+ ++ +++ARGLDV + V+N D P Y HR GRTGR G +GT +
Sbjct: 382 FKSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 439
>sp|A1C5V3|DBP3_ASPCL ATP-dependent RNA helicase dbp3 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=dbp3 PE=3 SV=1
Length = 503
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 184/395 (46%), Gaps = 56/395 (14%)
Query: 130 FNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKV---GPLKDKSSNGNGES 186
F PT +QSA P + DV+ + TGSGKTLA+ LP L K+ G +K K++
Sbjct: 105 FASPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKILDSGKIKFKNARP---- 160
Query: 187 GKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAI 246
AVI++P+REL MQI +I K G KA + GG + Q EAL+ AI
Sbjct: 161 ------AAVIISPTRELAMQIYDQISKYAGSIGIKATC-IFGGVKKDEQREALKS--AAI 211
Query: 247 VVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREP 306
VV TPGR+ ++ G + ++LVLDE D +L F + + I+ P
Sbjct: 212 VVATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIISST----------P 261
Query: 307 KSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPM 366
S +RQT+M +AT P SV A ++ + + + + P+ P
Sbjct: 262 DS------KRQTVMFTATWPPSVRDLAATF------MTSAVTVTIGGDPSADP------- 302
Query: 367 SGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQL 426
+N + KQ + + K Y V L +R ALD V+ F ++
Sbjct: 303 -----RANTRIKQTVEVVQSHDKEYRLVQLLSEN----QRGAAALD--KVLVFCLYKKEA 351
Query: 427 KDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVV 486
L + K A +HGDL + R +L FK+G VLV +++ARGLD+ LV+
Sbjct: 352 MRVERLLRNKNFKVAGIHGDLNQHERFKSLDAFKSGAATVLVATDVAARGLDIPSVKLVI 411
Query: 487 NLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPE 521
N+ P Y HR GRTGR G G +++ E +
Sbjct: 412 NVTFPLTVEDYVHRIGRTGRAGAEGRAITLFTETD 446
>sp|A3LX02|SPB4_PICST ATP-dependent rRNA helicase SPB4 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=SPB4 PE=3 SV=2
Length = 617
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 206/426 (48%), Gaps = 65/426 (15%)
Query: 113 LELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKV 172
L+ L P + E + GF T VQ+A IP + N DVV+++ TGSGKTLA+ +P+L KV
Sbjct: 13 LQYDLQPWIKEAIASLGFPTMTPVQAATIPLLSGNKDVVVEAVTGSGKTLAFAIPVLQKV 72
Query: 173 GP-LKDKSSNGNG-ESGKKTDIEAVIVAPSRELGMQIVREIKKLLG--PSDKKAV--QQL 226
L D G E K+ + A++++P+REL QI ++ P DK + Q L
Sbjct: 73 SNRLYDSQEEGEAPEKVKQGHMLAIVLSPTRELASQIQSVFNNVIEYLPEDKIPIKTQLL 132
Query: 227 VGGANRSRQE-EALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFR 285
VG + R + + K+KP I++ TPGR+ + ++ + + +LDE D+LL F+F
Sbjct: 133 VGSLSTVRDDLDRFLKDKPHILIATPGRMLDFMSSQYVKMNSVEIAILDEADKLLDFSFE 192
Query: 286 EAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQA 345
+ + I++ R PK +R+T + SAT+ + R+ ++P+ V
Sbjct: 193 KDVVNILK----------RLPK-------QRRTGLFSATISAAGNTIFRAGMNNPVKVAV 235
Query: 346 KNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLR 405
K+ S+ +N S P AL Y + + + K+ TL
Sbjct: 236 KS---------------------KSTTAN--------SAPSALHISYLMIEPEKKITTLI 266
Query: 406 RCVHALDAQTVIAFMNNTRQLKD--AVFKLEARG------MKAAELHGDLGKLARSTTLK 457
+ +H + I + +K ++F+ G K LHG L R TL+
Sbjct: 267 KLLHDYRYKKCIVYFPTCTSVKHFYSIFQKIVNGNDNTESFKFYSLHGQLATKPRLRTLQ 326
Query: 458 KFKNGEV----RVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTV 513
F +G+V +L+T +++ARG+D+ + DLV+ LD PTD + HR GRTGR + G
Sbjct: 327 SFTDGDVALNKHILMTTDVAARGIDIPDVDLVIQLDPPTDPDVFLHRCGRTGRANKVGRA 386
Query: 514 VSICEE 519
+ + +
Sbjct: 387 IVMLND 392
>sp|Q5B3H7|DBP8_EMENI ATP-dependent RNA helicase dbp8 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=dbp8
PE=3 SV=1
Length = 525
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 214/473 (45%), Gaps = 72/473 (15%)
Query: 87 RSDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILK 146
R D +K +LEI NSF L + P L+ L PT +Q A IP ILK
Sbjct: 73 RKDDENPVLIKDALEI-GLNAEENSFKALNVAPWLVGSLTTMAVRKPTAIQRACIPEILK 131
Query: 147 NHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQ 206
D + S TGSGKT+A+ +PIL K + I AVI+ P+REL +Q
Sbjct: 132 GRDCIGGSRTGSGKTIAFSVPILQKW-------------AEDPFGIFAVILTPTRELALQ 178
Query: 207 IVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHT 265
I +IK + P K V L+ G R + +P +VV TPGR+A+ I+ +G
Sbjct: 179 IFEQIKAISAPQSMKPV--LITGGTDMRSQAIELAGRPHVVVATPGRLADHINTSGTDTV 236
Query: 266 HG---CRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVS 322
G R +VLDE D LLS + + + S L ++RQT++ +
Sbjct: 237 AGLKRVRMVVLDEADRLLSPGPGSMLPDVETCL------------SFLPGPSQRQTLLFT 284
Query: 323 ATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQ 382
AT+ V L+SMP T PG P+ + ++ +A
Sbjct: 285 ATL-------------------TPEVRALKSMPQT-PGK--PPIFVTEIST-----EAKD 317
Query: 383 SLPPALKHYYCVTKLQHKVDTLRRCVHALD--AQTVIAFMNNTRQLKDAVFKLEARGMKA 440
++PP L+ Y L H+ L + ++ I F N T+ L + G +
Sbjct: 318 TVPPTLRTTYVQVPLTHREAFLHVLLSTESNITKSAIVFTNTTKSADLLERLLRSLGHRV 377
Query: 441 AELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHR 500
LH L + R++ L +F+ RVLV ++++RGLD+ LVVN ++P + Y HR
Sbjct: 378 TSLHSLLPQSERNSNLARFRASAARVLVATDVASRGLDIPSVSLVVNFEVPRNPDDYVHR 437
Query: 501 AGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACEFTEGRLVIGKEEE 553
GRT R GR G V++ + +V +V +++++ GR ++ EEE
Sbjct: 438 VGRTARAGRTGEAVTLVGQRDVQLVLAIEERI-----------GRKMVEYEEE 479
>sp|Q0U8V9|DBP8_PHANO ATP-dependent RNA helicase DBP8 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP8 PE=3 SV=1
Length = 508
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 137/452 (30%), Positives = 208/452 (46%), Gaps = 75/452 (16%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF + + P L+ L PT +Q A IP ILK D + S TG+GKT+A+ +PIL
Sbjct: 78 SFASIDVAPWLVASLASMEIKRPTGIQKACIPEILKGRDCIGGSRTGTGKTVAFSVPILQ 137
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
K +D S I +I+ P+REL +QI ++K + P K + LV G
Sbjct: 138 KWA--EDPSG-----------IFGLIITPTRELAIQIYEQVKAISAPQSMKPI--LVTGG 182
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHG---CRFLVLDEIDELLSFNFRE 286
+ R++ ++P +V+ TPGR+AE I +G+ G RF+V DE D LL+ R
Sbjct: 183 SDQREQAIALASRPHVVIATPGRLAEHIKTSGEDTICGLRRVRFVVFDEADRLLAPG-RG 241
Query: 287 AMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAK 346
+M +E S L + +RQT++ +ATV
Sbjct: 242 SMIPDIETC-----------LSVLPPKEQRQTLLFTATV-------------------TP 271
Query: 347 NVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRR 406
V+ L+S P PG L P+ ++ A P +L Y T + HK
Sbjct: 272 EVLALKSQP-RAPGRL--PIFVCEVDTETLAT------PASLSQLYLQTPVTHK-----E 317
Query: 407 C-VHALD------AQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKF 459
C +H L ++VI F N T+ + L + LH L + R + L +F
Sbjct: 318 CYLHVLLLTPLNLTKSVIIFCNRTKTATLLEYMLRMLDHRVTALHSGLKQQDRISNLARF 377
Query: 460 KNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEE 519
+ R+LV +++ARGLD+ E LVVN D+P D Y HR GRT R GR G V+ +
Sbjct: 378 RAQAARILVATDVAARGLDIPEVGLVVNFDVPRDPDDYIHRVGRTARAGRPGNSVTFIGQ 437
Query: 520 PEVFVVKKMQKQLAVPIQACE----FTEGRLV 547
+V +V +++++ + E EGR+V
Sbjct: 438 RDVELVLAIEERVGGKMSEFEEEGVSVEGRVV 469
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain
RS) GN=RRP3 PE=3 SV=1
Length = 474
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 127/424 (29%), Positives = 197/424 (46%), Gaps = 65/424 (15%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF +LG+ L E + G+ PT++Q+ +IP L+ D++ + TGSGKT A+ LPIL
Sbjct: 49 SFKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQGRDLIGLAETGSGKTAAFALPILQ 108
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
L DK + G +++AP+REL QI ++ + L G +VGG
Sbjct: 109 ---ALMDKPQSMFG----------LVLAPTRELAYQISQQFEAL-GSLISVRCAVIVGGM 154
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
+ Q AL K KP I+V TPGR+ + + ++LV+DE D LL +F +
Sbjct: 155 DMVSQAIALGK-KPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILD 213
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
+I++ + PK ER+T + SAT+ V R+
Sbjct: 214 KILKVL----------PK-------ERRTYLFSATMSSKVESLQRA-------------- 242
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVH 409
+LS P+ S S++ Q L + +HK L ++
Sbjct: 243 -----------SLSNPLRVSVSSNKYQT-------VSTLLQNCLIIPHKHKDIYLIYLLN 284
Query: 410 ALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVT 469
Q+VI F + + L A G A LHG L + AR L KF++ +LV
Sbjct: 285 EFPGQSVIIFTRTVNETQRLAILLRALGFGAIPLHGQLSQSARLGALGKFRSRSRNILVA 344
Query: 470 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQ 529
+++ARGLD+ DLV+N DLP+DS Y HR GRT R G+ G S+ + +V + ++++
Sbjct: 345 TDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLVTQYDVEIWQRIE 404
Query: 530 KQLA 533
L
Sbjct: 405 AALG 408
>sp|Q2GUI4|DBP3_CHAGB ATP-dependent RNA helicase DBP3 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=DBP3 PE=3 SV=1
Length = 566
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 127/399 (31%), Positives = 187/399 (46%), Gaps = 50/399 (12%)
Query: 130 FNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKK 189
F PT +Q+A+ P L DV+ + TGSGKT+A+ +P + + S N G +
Sbjct: 201 FTAPTPIQAASWPFALSGRDVIGIAETGSGKTMAFAVPCIESLA----SSPKPNHAKGDR 256
Query: 190 TDI-EAVIVAPSRELGMQI---VREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPA 245
T AV+V+P+REL MQ + + L+G S V L GGA + Q LRKN A
Sbjct: 257 TAYARAVVVSPTRELAMQTHAAMSSLASLVGLS----VVCLYGGAPKDDQRALLRKNSGA 312
Query: 246 -IVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPR 304
I+V TPGR+ + + G + F VLDE D +L F E + I+ PR
Sbjct: 313 DIIVATPGRLKDFLSEGCVSLSDVMFAVLDEADRMLDKGFEEDIKLIL------GSCRPR 366
Query: 305 EPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSG 364
E +RQT+M +AT P SV A + DP+ N G GN S
Sbjct: 367 E---------KRQTLMFTATWPTSVRGLAEGFMIDPVKATIGNRT---RAGEEGEGNGST 414
Query: 365 PMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQH----KVDTLRRCVHALDAQTVIAFM 420
+ +N++ +Q + + P K + L+ R V L + +
Sbjct: 415 EL-----QANIRIEQKVEVVDPRGKEQRLLELLKEAQKGSAKNDRILVFCLYKKEAVRVE 469
Query: 421 NNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVA 480
N LE RG++ +HGDL + R+ +L+ FK G VLV +++ARGLD+
Sbjct: 470 QN----------LERRGIRVCSIHGDLRQDQRTRSLESFKAGTTSVLVATDVAARGLDIP 519
Query: 481 ECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEE 519
E LV+N+ P Y HR GRTGR G++G +++ E
Sbjct: 520 EVKLVINVTFPLTIEDYVHRIGRTGRAGKKGKAITLFTE 558
>sp|Q9LYJ9|RH46_ARATH DEAD-box ATP-dependent RNA helicase 46 OS=Arabidopsis thaliana
GN=RH46 PE=2 SV=2
Length = 645
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/406 (29%), Positives = 182/406 (44%), Gaps = 59/406 (14%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF GLP LL + GF+ P+ +Q+ + P ++N D+V + TGSGKTL YL+P
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
+ + + S G ++++P+REL QI E K G S K + L GGA
Sbjct: 222 HLQRIHNDSRMGP---------TILVLSPTRELATQIQVEALKF-GKSSKISCACLYGGA 271
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHR 290
+ Q + + + IVV TPGR+ +I ++ H +LVLDE D +L F + +
Sbjct: 272 PKGPQLKEIERGV-DIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRK 330
Query: 291 IVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIP 350
IV V +RQT+M +AT P V + A +P V NV
Sbjct: 331 IVNEV-----------------PTKRQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDE 373
Query: 351 LESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHA 410
L + N Q + L P KH L + + +
Sbjct: 374 LVA--------------------NKSITQTIEVLAPMEKH-----------SRLEQILRS 402
Query: 411 LDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTN 470
+ + I +T+++ D + + R AA +HGD + R L +F++G VLV
Sbjct: 403 QEPGSKIIIFCSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVAT 462
Query: 471 ELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSI 516
+++ARGLDV + +VVN D P Y HR GRTGR G G +
Sbjct: 463 DVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 508
>sp|Q59NP8|SPB42_CANAL ATP-dependent rRNA helicase SPB42 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=SPB42 PE=3 SV=1
Length = 631
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/434 (28%), Positives = 212/434 (48%), Gaps = 69/434 (15%)
Query: 113 LELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKV 172
L L P + E + G+ T VQ++ IP + N DVV+++ TGSGKTL++++P+L K+
Sbjct: 13 LRYDLHPWIKEAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKI 72
Query: 173 GP-LKDKSSNGN-GESGKKTDIEAVIVAPSRELGMQIVREIKKLLG--PSDKKA---VQQ 225
L S+G+ E K+ + +++++P+REL QI ++L P DK Q
Sbjct: 73 SDRLYKPDSDGDLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQL 132
Query: 226 LVGGANRSRQE-EALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFN 283
LVG R++ N+P I++GTPGRI E + ++ + T ++LDE D+LL F+
Sbjct: 133 LVGSIGNVREDLNQFLTNQPQILIGTPGRILEFLGSSQSIKTSSLEIVILDEADKLLDFS 192
Query: 284 FREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLV 343
F + + I++ + PK +R+T + SAT+ + R+ ++P+ V
Sbjct: 193 FEKDVINILKKL----------PK-------QRRTGLFSATISSAGNTIFRTGMNNPVKV 235
Query: 344 QAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDT 403
Q K S G SNS P +L+ Y + + K+ T
Sbjct: 236 QVK----------------SKNYFGEQSNS-----------PKSLQLSYMMINPELKITT 268
Query: 404 LRRCVHALDAQTVIAFM------NNTRQLKDAVFKLEARG--MKAAELHGDLGKLARSTT 455
L + + I + + Q+ + V++ E+ +K LHG L +R T
Sbjct: 269 LLTILSKYQYKKAIVYFPTCTSVKHFYQIFNKVYQQESSDEPLKFFSLHGQLNTKSRLKT 328
Query: 456 LKKFKNGEVR----VLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRG 511
L F G++ +L+T +++ARG+D+ + DLV+ +D PTD + HR GRTGR + G
Sbjct: 329 LDNFTQGDINLYKHILMTTDVAARGIDIPDVDLVIQIDPPTDPNVFLHRCGRTGRANKVG 388
Query: 512 TVVSI----CEEPE 521
+ + C+E +
Sbjct: 389 RAIVMLNDNCQEED 402
>sp|Q4IJH1|DBP3_GIBZE ATP-dependent RNA helicase DBP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=DBP3 PE=3
SV=1
Length = 581
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 187/394 (47%), Gaps = 61/394 (15%)
Query: 130 FNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKK 189
+ PT +QSA+ P L DV+ + TGSGKT+A+ LP + + LK K +
Sbjct: 181 YKAPTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAISALKHKHT--------- 231
Query: 190 TDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVG 249
+AV+V+P+REL MQ ++ + + K V L GGA++ Q L + I+V
Sbjct: 232 ---KAVVVSPTRELAMQTYEQMASVAALNRMKCVC-LYGGASKDDQRNLLNRGAD-IIVA 286
Query: 250 TPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSA 309
TPGR+ + + G + F VLDE D +L F E + I+ S PRE
Sbjct: 287 TPGRLKDFMSDGTVDLSHSAFAVLDEADRMLDKGFEEDIKMIL------SSCPPRE---- 336
Query: 310 LAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGS 369
+RQT+M +AT P SV A ++ P+ + A G G
Sbjct: 337 -----KRQTLMFTATWPQSVQTLAATFMVSPVKI------------AIGSGGKETAGGAV 379
Query: 370 SSNSNLQAKQADQSLPPALKHYYCVTKL-QHKVDT------LRRCVHALDAQTVIAFMNN 422
+N + Q+ + L P K + + L +H+ + L C++ +A + F++
Sbjct: 380 ELQANARISQSVEVLEPRGKEFRLLEVLKEHQQGSKKNDRILVFCLYKKEATRIENFLSR 439
Query: 423 TRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAEC 482
+G++ +HGDL + R+ +L+ FK+G+ VLV +++ARGLD+ E
Sbjct: 440 -------------KGIRVGGIHGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGLDIPEV 486
Query: 483 DLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSI 516
LV+N+ P Y HR GRTGR G+ G ++
Sbjct: 487 KLVINVTFPLTIEDYVHRIGRTGRAGKTGQAITF 520
>sp|A6RW56|RRP3_BOTFB ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain
B05.10) GN=rrp3 PE=3 SV=1
Length = 486
Score = 159 bits (402), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/424 (29%), Positives = 194/424 (45%), Gaps = 65/424 (15%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF +LG+ L E + G+ PT +Q +IP L+ D++ + TGSGKT A+ LPIL
Sbjct: 61 SFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 120
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
L DK G +++AP+REL QI ++ + L G + +VGG
Sbjct: 121 A---LLDKPQPLFG----------LVLAPTRELAYQISQQFEAL-GSVIRVKCAVIVGGM 166
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
+ Q AL K KP I+V TPGR+ + + ++LV+DE D LL +F +
Sbjct: 167 DMVPQSIALGK-KPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILD 225
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
+I++ + R ER+T + SAT+ V R+ DPL V
Sbjct: 226 KILKVLPR-----------------ERRTYLFSATISSKVESLQRASLKDPLRVSI---- 264
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVH 409
SSN Q++ +++Y + L HK L ++
Sbjct: 265 --------------------SSNKY-------QTVSTLIQNYIFIP-LIHKDTYLIYLLN 296
Query: 410 ALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVT 469
Q+ I F + + L G A LHG L + +R L KF+ G +LV
Sbjct: 297 EFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREILVA 356
Query: 470 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQ 529
+++ARGLD+ D+V+N D+P DS Y HR GRT R G+ G +S+ + ++ + +++
Sbjct: 357 TDVAARGLDIPSVDVVLNYDVPQDSKTYIHRVGRTARAGKSGHAISVVTQYDLEIFMRIE 416
Query: 530 KQLA 533
L
Sbjct: 417 AALG 420
>sp|Q7XJN0|RH17_ARATH DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana
GN=RH17 PE=2 SV=1
Length = 609
Score = 159 bits (401), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 225/467 (48%), Gaps = 47/467 (10%)
Query: 97 KKSLEIESAPFAANSFLELGLPPLLLERL-EREGFNVPTEVQSAAIPSILKNHDVVIQSY 155
K + + +S FA+ SF LGL L ++L ER GF PT VQ+ AIP IL DV++ +
Sbjct: 16 KDASKAKSGLFASCSFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAP 75
Query: 156 TGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLL 215
TG+GKT+AYL P++ + K +G A+++ P+REL +Q+ ++KLL
Sbjct: 76 TGTGKTIAYLAPLIHHLQGHSPKVDRSHGTF-------ALVIVPTRELCLQVYETLEKLL 128
Query: 216 GPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE--ISAAGKLHTHGCRFLVL 273
++GG +++++ LRK +I++ TPGR+ + + A +H + R+++
Sbjct: 129 HRFHWIVPGYVMGGEKKAKEKARLRKG-ISILIATPGRLLDHLKNTASFVHKN-LRWVIF 186
Query: 274 DEIDELLSFNFREAMHRIVEHVGRRSGANPR-EPKSALAMRAERQTIMVSATVPFSVIRA 332
DE D +L + + + +I++ +G SG N + E + ++Q +++SAT+ V
Sbjct: 187 DEADSILELGYGKEIEQIIKLLG--SGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDL 244
Query: 333 ARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSS-----NSNLQAKQADQSLPPA 387
A+ DP+++ N +++ P + P S + N + D +P
Sbjct: 245 AKLSLDDPVMIGLDNTKLQQNLSIESP---AAPDSDAEDMVIHVNKSANPLSEDYGIPSQ 301
Query: 388 LKHYY----CVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKL---------- 433
L Y C +L + L+ +Q V+ F + TR D + L
Sbjct: 302 LVQRYLRVPCGARLVALLSVLKNLFEREASQKVVVFFS-TRDAVDFHYSLLSEFQWPPNS 360
Query: 434 --EARGMK-------AAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDL 484
E G K LHG + + R + FK + VL++ +++ARGLD +
Sbjct: 361 ETEEEGTKELFLKCKTFRLHGSMEQEDRRSAFGTFKTEKQAVLLSTDVAARGLDFPKVRC 420
Query: 485 VVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQ 531
++ D P ++ Y HR GRT R+G +G + + E+ +K+++K
Sbjct: 421 IIQYDCPGEATEYVHRVGRTARIGEKGEALLFLQPIEIDYLKELKKH 467
>sp|A7EML8|RRP3_SCLS1 ATP-dependent rRNA helicase rrp3 OS=Sclerotinia sclerotiorum
(strain ATCC 18683 / 1980 / Ss-1) GN=rrp3 PE=3 SV=1
Length = 482
Score = 158 bits (400), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/423 (29%), Positives = 192/423 (45%), Gaps = 65/423 (15%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF +LG+ L E + G+ PT +Q +IP L+ D++ + TGSGKT A+ LPIL
Sbjct: 57 SFKDLGIVDSLCEACDTLGYKAPTPIQRESIPLALQGRDLIGLAETGSGKTAAFALPILQ 116
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
L DK G +++AP+REL QI + + L G + +VGG
Sbjct: 117 S---LLDKPQPLFG----------LVLAPTRELAYQISQSFEAL-GSIIRVKCAVIVGGM 162
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
+ Q AL K KP I+V TPGR+ + + ++LV+DE D LL +F +
Sbjct: 163 DMVPQAIALGK-KPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLDLDFGPILD 221
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
+I++ + R ER+T + SAT+ V R+ DPL V
Sbjct: 222 KILKVLPR-----------------ERRTYLFSATISSKVESLQRASLKDPLRVSI---- 260
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVH 409
SSN Q++ +++Y + L HK L ++
Sbjct: 261 --------------------SSNKY-------QTVSTLIQNYIFIP-LVHKDTYLIYLLN 292
Query: 410 ALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVT 469
Q+ I F + + L G A LHG L + +R L KF+ G +LV
Sbjct: 293 EFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREILVA 352
Query: 470 NELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQ 529
+++ARGLD+ D+V+N D+P DS Y HR GRT R G+ G +S + +V + +++
Sbjct: 353 TDVAARGLDIPSVDVVLNYDMPQDSKTYIHRVGRTARAGKSGHAISFVTQYDVEIWMRIE 412
Query: 530 KQL 532
L
Sbjct: 413 AAL 415
>sp|A2QFL3|DBP3_ASPNC ATP-dependent RNA helicase dbp3 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp3 PE=3 SV=1
Length = 495
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 181/399 (45%), Gaps = 65/399 (16%)
Query: 128 EGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESG 187
E F PT +QSA P + DV+ + TGSGKTL + LP L K+ + + G
Sbjct: 96 ESFTSPTAIQSATWPFLFSGRDVIGIAETGSGKTLGFGLPCL--------KNLQDSAKKG 147
Query: 188 KKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIV 247
K AV+++P+REL MQI +I K D K V + GG + Q EAL+ AIV
Sbjct: 148 KPYKPTAVMISPTRELAMQIHDQISKFAELVDIK-VACIFGGVKKEEQREALKT--AAIV 204
Query: 248 VGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPK 307
V TPGR+ ++ G + ++LVLDE D +L F + + I+ + P
Sbjct: 205 VATPGRLKDLQNDGSVDLGKVKYLVLDEADRMLDKGFEQDIKDIIRPM----------PV 254
Query: 308 SALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMS 367
S +RQT+M +AT P V A ++ P+ V + P+ P
Sbjct: 255 S------KRQTVMFTATWPPVVRDLAATFMTSPVTVT------IGGEPSADP-------- 294
Query: 368 GSSSNSNLQAKQADQSLPPALKHYYCVTKLQH-------KVDTLRRCVHALDAQTVIAFM 420
+N + KQ + + P K V L L C++ +A V +
Sbjct: 295 ----RANTRIKQVVEVVKPHEKEQRLVQLLNKYQKGPSSSDKILVFCLYKKEAVRVERLL 350
Query: 421 NNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVA 480
N +G K A +HGDLG+ R +L+ FK G VLV +++ARGLD+
Sbjct: 351 WN-------------KGFKVAGIHGDLGQQERFKSLESFKKGVSTVLVATDVAARGLDIP 397
Query: 481 ECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEE 519
LV+N+ P Y HR GRTGR G G +++ E
Sbjct: 398 SVKLVINVTFPLTVEDYVHRIGRTGRAGAEGHAITLFTE 436
>sp|Q0INC5|RH28_ORYSJ DEAD-box ATP-dependent RNA helicase 28 OS=Oryza sativa subsp.
japonica GN=Os12g0481100 PE=2 SV=2
Length = 802
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 132/431 (30%), Positives = 201/431 (46%), Gaps = 62/431 (14%)
Query: 103 ESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTL 162
E A F ANSFLEL L LL E G+ PT +Q+A IP L D+ + TGSGKT
Sbjct: 187 EGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAITGSGKTA 246
Query: 163 AYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKA 222
A+ LP+L ++ + K I +I+ P+REL Q+ I+KL +D +
Sbjct: 247 AFSLPVLERL-LFRPKRVPA---------IRVLILTPTRELAAQVHSMIEKLAQFTDIRC 296
Query: 223 VQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLS 281
+VGG + QE ALR + P IVV TPGRI + + + + L+LDE D LL
Sbjct: 297 CL-IVGGLSTKVQEVALR-SMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLE 354
Query: 282 FNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPL 341
F + ++ RR RQT++ SAT+ + ++ +
Sbjct: 355 LGFSAEIQELIRMCPRR-----------------RQTMLFSATMTEEI--------NELV 389
Query: 342 LVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQ-AKQADQSLPPALKHYYCVTKLQHK 400
+ + LE+ P+ L P + + ++ A++A+Q A+ C+ + K
Sbjct: 390 TLSLNKPVRLEADPS-----LKRPATLTEEVVRIRRAREANQE---AVLLALCLKTFKDK 441
Query: 401 VDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFK 460
V H+ +I F L GMKAAELHG+L + R L+ FK
Sbjct: 442 VIIFSGTKHSAHRLKII-------------FGLS--GMKAAELHGNLTQAQRLEALELFK 486
Query: 461 NGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEP 520
EV L+ +++ARG+D+ V+N P D+ Y HR GRT R GR G V+ +
Sbjct: 487 KQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAVTFVTDD 546
Query: 521 EVFVVKKMQKQ 531
+ ++K + K+
Sbjct: 547 DRSLLKAIAKK 557
>sp|Q7RZ35|DBP4_NEUCR ATP-dependent RNA helicase dbp-4 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=dbp-4 PE=3 SV=1
Length = 823
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 207/443 (46%), Gaps = 65/443 (14%)
Query: 97 KKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYT 156
K+ E++ N F +L L L F V T+VQ AAIP LK D++ + T
Sbjct: 44 KRIDELDPKSTELNKFSDLPLCEPTASGLRASHFEVLTDVQRAAIPLALKGQDILGAART 103
Query: 157 GSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLG 216
GSGKTLA+L+P+L K+ + +G G A+I++P+REL +QI ++K+ G
Sbjct: 104 GSGKTLAFLVPVLEKLYRARWTEYDGLG---------ALIISPTRELAVQIFEVLRKI-G 153
Query: 217 PSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDE 275
+ + ++GG +S +EEA R + I+V TPGR+ + + + LVLDE
Sbjct: 154 RNHSFSAGLVIGG--KSLKEEAERLGRMNILVCTPGRMLQHLDQTAGFDVDNLQMLVLDE 211
Query: 276 IDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARS 335
D ++ F++A+ +VEH+ PKS RQT++ SAT
Sbjct: 212 ADRIMDMGFQQAVDALVEHL----------PKS-------RQTLLFSAT----------- 243
Query: 336 WGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVT 395
Q+K V L + P +S + +S+ P L+ +Y VT
Sbjct: 244 --------QSKRVSDLARLSLKDPEYVSVHEAAASAT------------PVGLQQHYIVT 283
Query: 396 KLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAV--FKLEARGMKAAELHGDLGKLARS 453
L K+DTL + +I FM++ +Q++ FK G+ LHG ++AR
Sbjct: 284 PLPEKLDTLWGFLRTNLKSKIIVFMSSGKQVRFVYESFKRMQPGIPLLHLHGRQKQIARL 343
Query: 454 TTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTV 513
+F + + L ++ ARG+D D V+ +D P D+ Y HR GRT R +G
Sbjct: 344 EITNRFTSAKYSCLFATDVVARGVDFPAVDWVIQVDCPEDADTYIHRVGRTARYESKGRA 403
Query: 514 VSICE--EPEVFVVKKMQKQLAV 534
V + E E F+ + K++ V
Sbjct: 404 VLFLDPSEEEGFLKRLEHKKVTV 426
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 198/430 (46%), Gaps = 77/430 (17%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF EL L P L++ + ++ PT +QS AIP L+ HD++ + TGSGKT A+ +PIL+
Sbjct: 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
++ ++ A I+AP+REL QI +E LG +VGG
Sbjct: 142 RLWHDQEPYY-------------ACILAPTRELAQQI-KETFDSLGSLMGVRSTCIVGGM 187
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
N Q L + KP I++ TPGR+ + + +FLV+DE D LL F +
Sbjct: 188 NMMDQARDLMR-KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLD 246
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
RI++ + P + ER T + SAT+ + + R+
Sbjct: 247 RILKII-------PTQ---------ERTTYLFSATMTSKIDKLQRA-------------- 276
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSL---PPALKHYYCVTKLQHKVDTLRR 406
+L+ P+ + SN Q+L P LK+ Y + L +
Sbjct: 277 -----------SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFI----- 320
Query: 407 CVHALDAQTVIAFMN---NTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGE 463
+T+I F N +L LE A LHGDL + R +L FK G+
Sbjct: 321 ------GKTMIIFTRTKANAERLSGLCNLLE---FSATALHGDLNQNQRMGSLDLFKAGK 371
Query: 464 VRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVF 523
+LV +++ARGLD+ D+VVN D+P DS Y HR GRT R GR G +S+ + ++
Sbjct: 372 RSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLE 431
Query: 524 VVKKMQKQLA 533
++ ++++ L
Sbjct: 432 LILRIEEVLG 441
>sp|Q887N8|RHLB_PSESM ATP-dependent RNA helicase RhlB OS=Pseudomonas syringae pv. tomato
(strain DC3000) GN=rhlB PE=3 SV=1
Length = 397
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 199/433 (45%), Gaps = 64/433 (14%)
Query: 112 FLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSK 171
F + L P L+ ++ GF T +Q+ + LK D + ++ TG+GKT A+L+ I+ +
Sbjct: 10 FHDFNLAPELMHAIQDLGFPYCTPIQAGVLGFTLKGKDAIGRAQTGTGKTAAFLISIIEQ 69
Query: 172 VGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGAN 231
+ + GE A+I+AP+REL +QI ++ L ++ V VGG +
Sbjct: 70 LTQTPPPAERYMGEP------RALIIAPTRELVVQIAKDAADLTKYTNLN-VMTFVGGMD 122
Query: 232 RSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRI 291
+Q + L I+V TPGR+ + + G++H +VLDE D +L F + +I
Sbjct: 123 FDKQLKQLEARHCDILVATPGRLLDFNQRGEVHLDMVEVMVLDEADRMLDMGFIPQVRQI 182
Query: 292 VEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPL 351
+ + ERQT++ SAT V+ A+ W DP +++ +
Sbjct: 183 IRQT---------------PHKGERQTLLFSATFTEDVMNLAKQWTTDP------SIVEI 221
Query: 352 ESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHAL 411
ES+ N+ + +Q H Y V K L V
Sbjct: 222 ESL-------------------NVASDNVEQ-------HIYAVAGAD-KYKLLYNLVTDN 254
Query: 412 DAQTVIAFMNNTRQLKDAVFKLEAR----GMKAAELHGDLGKLARSTTLKKFKNGEVRVL 467
+ V+ F N KD V ++E R G+ AA+L GD+ + R TL+ F+ G++RVL
Sbjct: 255 GWERVMVFANR----KDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVL 310
Query: 468 VTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKK 527
V +++ RG+ + V+N LP Y HR GRTGR G G +S E + + +
Sbjct: 311 VATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPA 370
Query: 528 MQKQLAVPIQACE 540
++++L I +CE
Sbjct: 371 IEEKLGRKI-SCE 382
>sp|Q59LU0|DBP2_CANAL ATP-dependent RNA helicase DBP2 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=DBP2 PE=3 SV=2
Length = 562
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 187/414 (45%), Gaps = 56/414 (13%)
Query: 106 PFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYL 165
P +F E G P +L+ ++ +GF PT +Q P L D++ + TGSGKTL+Y
Sbjct: 123 PHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYC 182
Query: 166 LPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQ 225
LP + + + + G+G +++AP+REL +QI E K G S +
Sbjct: 183 LPSIVHIN-AQPQLQYGDGPI-------VLVLAPTRELAVQIQTECSKF-GKSSRIRNTC 233
Query: 226 LVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFR 285
+ GGA + Q L + I + TPGR+ ++ AGK + +LVLDE D +L F
Sbjct: 234 VYGGAPKGPQIRDLARGV-EICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFE 292
Query: 286 EAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQA 345
+ +IV+ + R +RQT+M SAT P V + R + +DP+ V
Sbjct: 293 PQIRKIVDQI-----------------RPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTI 335
Query: 346 KNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLR 405
G+L L A L + + +K V L
Sbjct: 336 --------------GSLE-----------LAASHTITQLVEVIDEF---SKRDRLVKHLE 367
Query: 406 RCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVR 465
++ D + ++ F + R + L + G A +HGD + R L +F+ G+
Sbjct: 368 SALNEKDNK-ILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTS 426
Query: 466 VLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEE 519
++V +++ARG+DV V+N D+P + Y HR GRTGR G GT +S E
Sbjct: 427 IMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTE 480
>sp|A5AA68|DBP8_ASPNC ATP-dependent RNA helicase dbp8 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=dbp8 PE=3 SV=1
Length = 522
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/474 (28%), Positives = 214/474 (45%), Gaps = 65/474 (13%)
Query: 84 KAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPS 143
K SD + +K +LEI A NSF L + P L+ L PT +Q A IP
Sbjct: 67 KPATSDKDEPVLIKDALEI-GLNDAQNSFASLNVAPWLIGSLTTMAVRKPTAIQKACIPE 125
Query: 144 ILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSREL 203
IL D + S TGSGKT+A+ +P+L K + I +++ P+REL
Sbjct: 126 ILNGRDCIGGSRTGSGKTIAFSVPMLQKW-------------AEDPFGIFGLVLTPTREL 172
Query: 204 GMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGK 262
+QI +IK + P K + L+ G R + +P +V+ TPGR+A+ I+ +G
Sbjct: 173 ALQIYEQIKAISAPQSMKPL--LITGGTDMRPQAVALAQRPHVVIATPGRLADHINTSGS 230
Query: 263 LHTHG---CRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTI 319
G R +VLDE D LL+ + + + SAL +ERQT+
Sbjct: 231 DTIRGLKRVRMVVLDEADRLLAPGHGSMLPDVETCL------------SALPPSSERQTL 278
Query: 320 MVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQ 379
+ +AT+ V RA +S P+T P +S +
Sbjct: 279 LFTATLTPEV-RALKSMPR----------------PSTKPPIFVTEIS----------TE 311
Query: 380 ADQSLPPALKHYYCVTKLQHKVDTLRRCV--HALDAQTVIAFMNNTRQLKDAVFKLEARG 437
+ S+PP LK Y + H+ L + A ++ I F N+T+ L
Sbjct: 312 NNASIPPTLKQTYLKVPMTHREAFLHVLLSTEANASKPAIIFCNHTKTADLLERMLRRLS 371
Query: 438 MKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHY 497
+ LH L + R+ L +F+ R+LV ++++RGLD+ +LVVN D+P + Y
Sbjct: 372 HRVTSLHSLLPQSERNANLARFRASAARLLVATDVASRGLDIPSVELVVNFDVPRNPDDY 431
Query: 498 AHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACE----FTEGRLV 547
HR GRT R GR+G V++ + +V +V +++++ ++ EGR+V
Sbjct: 432 VHRVGRTARAGRKGESVTLVGQRDVSLVLAIEERVGRQMEEWSEEGVSVEGRVV 485
>sp|A4RGD1|RRP3_MAGO7 ATP-dependent rRNA helicase RRP3 OS=Magnaporthe oryzae (strain
70-15 / ATCC MYA-4617 / FGSC 8958) GN=RRP3 PE=3 SV=1
Length = 538
Score = 157 bits (398), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 184/422 (43%), Gaps = 65/422 (15%)
Query: 110 NSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPIL 169
SF +LG+ L E E F PT +Q AIP L+ DV+ + TGSGKT A+ LPIL
Sbjct: 110 KSFRDLGIVEPLCEACEALKFKKPTPIQEQAIPLALQGRDVIGIAETGSGKTAAFALPIL 169
Query: 170 SKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGG 229
+ K + +++AP+REL QI + + L G S +VGG
Sbjct: 170 QSL-------------LEKPQPLFGLVLAPTRELAAQIGQTFEAL-GASISLRCAVVVGG 215
Query: 230 ANRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAM 288
+ Q AL K KP IVV TPGR+ + + +FLV+DE D LL +F +
Sbjct: 216 LDMVSQSTALGK-KPHIVVATPGRLLDHLEKTKGFSLRSLKFLVMDEADRLLDLDFGPIL 274
Query: 289 HRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNV 348
+I++ + R ER+T + SAT+ V R+ DPL V
Sbjct: 275 DKILKFLPR-----------------ERRTFLFSATMSSKVESLQRASLRDPLKVS---- 313
Query: 349 IPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCV 408
+S S + Q +P K Y +
Sbjct: 314 -----------------VSSSQEKTVSTLIQNPLFIPHKHKDVYLIY-----------LA 345
Query: 409 HALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLV 468
+ +T I F + + L A LHG L + R L KFK +LV
Sbjct: 346 NEFAGKTTIVFTRTVNEAQRVSILLRTLSFGAIPLHGQLSQSMRLGALNKFKARSRDILV 405
Query: 469 TNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKM 528
+++ARGLD+ E DLV+N D+P DS+ Y HR GRT R GR G +SI + ++ + ++
Sbjct: 406 ATDVAARGLDIPEVDLVINFDMPQDSMTYIHRVGRTARAGRSGRAISIITQYDLELWLRI 465
Query: 529 QK 530
+K
Sbjct: 466 EK 467
>sp|Q0UY62|DBP3_PHANO ATP-dependent RNA helicase DBP3 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=DBP3 PE=3 SV=1
Length = 592
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 122/405 (30%), Positives = 190/405 (46%), Gaps = 69/405 (17%)
Query: 123 ERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPL-KDKSSN 181
+R GF PT +Q+A P +L D+V + TGSGKTLA+ +P + + L KDK
Sbjct: 191 QRAPFAGFTAPTPIQAATWPFLLSGRDMVGVAETGSGKTLAFGVPCVRAILSLPKDK--- 247
Query: 182 GNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRK 241
+ I+AVIV+P+REL +QI ++ L P+ V + GG + Q A RK
Sbjct: 248 -------RKGIKAVIVSPTRELAVQIYDQLVALAHPAGLSVVC-VYGGVPKDPQVAACRK 299
Query: 242 NKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGA 301
IVV TPGR+ ++ G ++VLDE D +L F E + +I+ ++
Sbjct: 300 AH--IVVATPGRLNDLIGDGSADLSNADYVVLDEADRMLDKGFEEPIRQIISQTPKK--- 354
Query: 302 NPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGN 361
RQT+M +AT P SV A ++ P+ + + N
Sbjct: 355 --------------RQTLMFTATWPPSVRDLASTFMVSPVRITIGD-------------N 387
Query: 362 LSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQ------HKVD-TLRRCVHALDAQ 414
SG + +N++ KQ + L P K + L+ +K D L C++ +A
Sbjct: 388 QSGEL-----RANVRIKQLVEVLDPHAKEQRLLQLLKQYQSGKNKDDRILVFCLYKKEAM 442
Query: 415 TVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSA 474
+ F + +G + +HGDL + RS +L FK G+V +LV +++A
Sbjct: 443 RIENF-------------IRMKGFRVGGIHGDLSQEKRSASLAAFKEGQVPLLVATDVAA 489
Query: 475 RGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEE 519
RGLD+ LV+N+ P + Y HR GRTGR G+ G ++ E
Sbjct: 490 RGLDIPAVKLVINVTFPLTAEDYVHRIGRTGRAGKEGLAITFFTE 534
>sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae
(strain YJM789) GN=RRP3 PE=3 SV=1
Length = 501
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 197/430 (45%), Gaps = 77/430 (17%)
Query: 111 SFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILS 170
SF EL L P L++ + ++ PT +QS AIP L+ HD++ + TGSGKT A+ +PIL+
Sbjct: 82 SFSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILN 141
Query: 171 KVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGA 230
++ ++ A I+AP+REL QI +E LG +VGG
Sbjct: 142 RLWHDQEPYY-------------ACILAPTRELAQQI-KETFDSLGSLMGVRSTCIVGGM 187
Query: 231 NRSRQEEALRKNKPAIVVGTPGRIAE-ISAAGKLHTHGCRFLVLDEIDELLSFNFREAMH 289
N Q L + KP I++ TPGR+ + + +FLV+DE D LL F +
Sbjct: 188 NMMDQARDLMR-KPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLD 246
Query: 290 RIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVI 349
RI++ + P + ER T + SAT+ + + R+
Sbjct: 247 RILKII-------PTQ---------ERTTYLFSATMTSKIDKLQRA-------------- 276
Query: 350 PLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSL---PPALKHYYCVTKLQHKVDTLRR 406
+L+ P+ + SN Q+L P LK+ Y + L +
Sbjct: 277 -----------SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFI----- 320
Query: 407 CVHALDAQTVIAFMN---NTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGE 463
+T+I F N +L LE A LHGDL + R L FK G+
Sbjct: 321 ------GKTMIIFTRTKANAERLSGLCNLLE---FSATALHGDLNQNQRMGALDLFKAGK 371
Query: 464 VRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVF 523
+LV +++ARGLD+ D+VVN D+P DS Y HR GRT R GR G +S+ + ++
Sbjct: 372 RSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLE 431
Query: 524 VVKKMQKQLA 533
++ ++++ L
Sbjct: 432 LILRIEEVLG 441
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.377
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,647,421
Number of Sequences: 539616
Number of extensions: 8279751
Number of successful extensions: 31355
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1660
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 25225
Number of HSP's gapped (non-prelim): 3113
length of query: 560
length of database: 191,569,459
effective HSP length: 123
effective length of query: 437
effective length of database: 125,196,691
effective search space: 54710953967
effective search space used: 54710953967
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)