Citrus Sinensis ID: 008602

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFEPTNKNKSNKPKKHSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACEFTEGRLVIGKEEEKTLEAVR
cccccccHHHHHcccccccccccccccccccccccEEEEEccccccccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHcccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHHHccccccEEEEEEccccHHHHHHHHHcccccEEEEcccHHHHHHHccccccccccEEEEEccccccccccHHHHHHHHHHHccccccccccccccccccccccEEEEEccccHHHHHHHHHHccccEEEEEECccccccccccccccccccccccccccccHHHccccccccccEEEEEEcccccHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHHcccccEEEEEcccccccccccccEEEEccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHc
****VSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVG*********************************************************LEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGP******************EAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRR************AMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGN*************LQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACEFTEGRLVIG***********
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MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFEPTNKNKSNKPKKHSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPPLLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKSSNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEALRKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRSGANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGPGNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAFMNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQACEFTEGRLVIGKEEEKTLEAVR

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
DEAD-box ATP-dependent RNA helicase 47A probableQ6H874
DEAD-box ATP-dependent RNA helicase 47, mitochondrial Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation.probableQ8W4E1

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.6.-.-Acting on acid anhydrides.probable
3.6.4.-Acting on acid anhydrides; involved in cellular and subcellular movement.probable
3.6.4.13RNA helicase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2I4I, chain A
Confidence level:very confident
Coverage over the Query: 101-298,312-346,384-534
View the alignment between query and template
View the model in PyMOL
Template: 1WP9, chain A
Confidence level:very confident
Coverage over the Query: 132-173,189-295,313-521
View the alignment between query and template
View the model in PyMOL
Template: 3OIY, chain A
Confidence level:very confident
Coverage over the Query: 121-172,189-352,380-546
View the alignment between query and template
View the model in PyMOL
Template: 2EYQ, chain A
Confidence level:confident
Coverage over the Query: 17-27,40-103,114-172,189-295,313-350,386-521
View the alignment between query and template
View the model in PyMOL