Query 008603
Match_columns 560
No_of_seqs 405 out of 3325
Neff 7.0
Searched_HMMs 46136
Date Thu Mar 28 14:14:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008603.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008603hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 4E-27 8.6E-32 254.9 22.7 309 3-320 8-346 (485)
2 KOG0254 Predicted transporter 99.9 2.5E-25 5.4E-30 245.9 20.2 303 3-318 42-368 (513)
3 TIGR00887 2A0109 phosphate:H+ 99.9 7.8E-23 1.7E-27 225.1 24.5 207 3-210 13-250 (502)
4 PRK10077 xylE D-xylose transpo 99.9 1E-22 2.2E-27 221.3 23.2 206 4-212 10-241 (479)
5 TIGR01299 synapt_SV2 synaptic 99.9 1.1E-21 2.3E-26 224.1 27.1 207 3-212 164-381 (742)
6 TIGR02332 HpaX 4-hydroxyphenyl 99.9 8.4E-21 1.8E-25 204.0 28.1 185 4-190 6-194 (412)
7 PF00083 Sugar_tr: Sugar (and 99.9 6.5E-26 1.4E-30 244.7 -12.1 208 10-218 4-224 (451)
8 PRK10642 proline/glycine betai 99.9 1E-20 2.2E-25 207.9 26.1 189 6-195 16-222 (490)
9 COG2814 AraJ Arabinose efflux 99.9 2.8E-20 6.1E-25 196.5 24.5 226 3-238 10-235 (394)
10 PLN00028 nitrate transmembrane 99.9 8.3E-20 1.8E-24 200.1 27.3 183 4-189 34-223 (476)
11 TIGR00891 2A0112 putative sial 99.9 1E-19 2.2E-24 191.6 26.0 188 3-193 9-196 (405)
12 PRK14995 methyl viologen resis 99.8 3E-19 6.5E-24 196.5 27.9 185 1-189 1-186 (495)
13 PRK11551 putative 3-hydroxyphe 99.8 2.3E-19 4.9E-24 190.9 25.9 188 3-194 12-199 (406)
14 PRK10406 alpha-ketoglutarate t 99.8 3.7E-19 8.1E-24 192.0 26.4 188 3-191 19-224 (432)
15 TIGR00879 SP MFS transporter, 99.8 1.9E-19 4.1E-24 192.4 22.7 206 4-210 26-241 (481)
16 PRK03545 putative arabinose tr 99.8 9.3E-19 2E-23 185.9 26.3 182 4-189 7-188 (390)
17 PRK12307 putative sialic acid 99.8 8.2E-19 1.8E-23 187.8 25.1 183 4-191 16-198 (426)
18 TIGR00898 2A0119 cation transp 99.8 3.7E-20 8.1E-25 203.1 13.9 179 27-211 110-289 (505)
19 PRK09952 shikimate transporter 99.8 6.8E-19 1.5E-23 190.7 22.6 187 5-195 21-229 (438)
20 TIGR00711 efflux_EmrB drug res 99.8 2.2E-18 4.7E-23 187.3 23.3 179 7-189 3-181 (485)
21 TIGR00710 efflux_Bcr_CflA drug 99.8 3.4E-18 7.4E-23 179.2 23.8 177 10-190 9-185 (385)
22 PRK10091 MFS transport protein 99.8 5.5E-18 1.2E-22 179.8 24.9 177 9-189 6-182 (382)
23 TIGR00886 2A0108 nitrite extru 99.8 5.9E-18 1.3E-22 176.7 24.3 178 10-190 5-193 (366)
24 TIGR00890 2A0111 Oxalate/Forma 99.8 1.7E-18 3.7E-23 179.7 20.0 163 22-189 19-181 (377)
25 TIGR00903 2A0129 major facilit 99.8 6.7E-18 1.5E-22 179.3 24.4 168 20-192 5-172 (368)
26 TIGR00893 2A0114 d-galactonate 99.8 2.9E-18 6.2E-23 178.2 21.1 172 15-190 3-174 (399)
27 TIGR00895 2A0115 benzoate tran 99.8 5.9E-18 1.3E-22 177.2 21.5 188 4-195 15-202 (398)
28 PRK11663 regulatory protein Uh 99.8 7.4E-18 1.6E-22 182.2 22.4 182 6-191 23-204 (434)
29 PRK09556 uhpT sugar phosphate 99.8 3.3E-18 7.1E-23 186.7 19.8 185 4-190 27-217 (467)
30 PRK15402 multidrug efflux syst 99.8 1.8E-17 4E-22 176.8 25.1 184 3-190 10-193 (406)
31 COG2271 UhpC Sugar phosphate p 99.8 2.3E-18 4.9E-23 180.8 17.0 187 3-191 26-212 (448)
32 PRK03893 putative sialic acid 99.8 3.4E-17 7.3E-22 179.0 26.8 184 4-192 18-201 (496)
33 PRK15075 citrate-proton sympor 99.8 1.8E-17 3.9E-22 179.1 23.0 183 5-190 14-216 (434)
34 PRK10213 nepI ribonucleoside t 99.8 7.8E-17 1.7E-21 172.3 25.8 183 3-189 17-199 (394)
35 KOG1330 Sugar transporter/spin 99.8 2.1E-19 4.5E-24 190.2 5.8 187 1-190 28-214 (493)
36 PRK10133 L-fucose transporter; 99.8 1.4E-16 2.9E-21 173.1 27.0 149 4-154 24-175 (438)
37 PRK10473 multidrug efflux syst 99.8 7.3E-17 1.6E-21 171.2 24.4 166 20-189 17-182 (392)
38 PRK15034 nitrate/nitrite trans 99.8 8.4E-17 1.8E-21 174.9 24.7 219 6-236 34-274 (462)
39 PRK03699 putative transporter; 99.8 9.7E-17 2.1E-21 171.0 24.0 175 3-180 4-178 (394)
40 PRK10504 putative transporter; 99.8 8E-17 1.7E-21 175.2 23.3 180 6-189 10-189 (471)
41 PRK15403 multidrug efflux syst 99.8 2.4E-16 5.1E-21 169.7 26.7 179 8-190 18-196 (413)
42 PRK09705 cynX putative cyanate 99.7 7.5E-17 1.6E-21 172.1 21.4 165 9-179 13-178 (393)
43 PRK11102 bicyclomycin/multidru 99.7 8.5E-17 1.8E-21 169.1 21.3 165 21-189 6-170 (377)
44 TIGR00900 2A0121 H+ Antiporter 99.7 1.4E-16 3.1E-21 164.8 22.6 167 11-181 4-175 (365)
45 KOG0255 Synaptic vesicle trans 99.7 2.5E-17 5.5E-22 182.0 17.8 165 41-211 116-280 (521)
46 PF07690 MFS_1: Major Facilita 99.7 5.6E-17 1.2E-21 167.2 19.2 174 12-189 2-176 (352)
47 PRK11043 putative transporter; 99.7 4.4E-16 9.4E-21 165.7 25.1 175 9-188 9-183 (401)
48 PRK11273 glpT sn-glycerol-3-ph 99.7 4E-16 8.8E-21 169.5 24.4 181 6-191 29-214 (452)
49 KOG0253 Synaptic vesicle trans 99.7 2.2E-17 4.7E-22 169.8 13.5 202 5-213 77-278 (528)
50 COG2223 NarK Nitrate/nitrite t 99.7 9.8E-17 2.1E-21 168.6 18.6 232 3-243 11-247 (417)
51 TIGR00881 2A0104 phosphoglycer 99.7 5E-17 1.1E-21 168.8 16.5 174 13-190 2-176 (379)
52 TIGR00883 2A0106 metabolite-pr 99.7 1.1E-16 2.5E-21 167.0 19.2 177 15-192 2-197 (394)
53 PRK05122 major facilitator sup 99.7 6.6E-16 1.4E-20 164.1 23.1 169 7-179 16-193 (399)
54 PRK12382 putative transporter; 99.7 1.6E-15 3.6E-20 160.8 25.1 167 7-177 16-191 (392)
55 PRK11652 emrD multidrug resist 99.7 2E-15 4.4E-20 160.3 25.8 184 3-190 5-188 (394)
56 PRK09874 drug efflux system pr 99.7 1.3E-15 2.8E-20 161.6 24.2 178 9-189 17-197 (408)
57 PRK03633 putative MFS family t 99.7 1.1E-15 2.3E-20 162.1 23.2 152 1-154 1-152 (381)
58 KOG0252 Inorganic phosphate tr 99.7 1.2E-16 2.5E-21 168.9 14.2 190 2-192 37-252 (538)
59 TIGR00899 2A0120 sugar efflux 99.7 1.3E-15 2.8E-20 159.4 22.0 175 13-191 4-182 (375)
60 TIGR00712 glpT glycerol-3-phos 99.7 1.7E-15 3.7E-20 163.9 23.5 183 5-191 26-212 (438)
61 TIGR00885 fucP L-fucose:H+ sym 99.7 4.8E-15 1E-19 159.6 25.1 179 7-187 4-210 (410)
62 TIGR00894 2A0114euk Na(+)-depe 99.7 3E-16 6.5E-21 170.7 14.6 185 3-191 16-225 (465)
63 cd06174 MFS The Major Facilita 99.7 2.6E-15 5.6E-20 153.8 20.0 168 10-181 3-170 (352)
64 PRK11195 lysophospholipid tran 99.7 2.3E-14 4.9E-19 153.2 27.1 178 1-190 1-178 (393)
65 TIGR00897 2A0118 polyol permea 99.6 3.8E-14 8.2E-19 151.6 26.1 173 12-188 19-196 (402)
66 PRK10054 putative transporter; 99.6 4.2E-14 9E-19 151.3 25.9 180 1-188 5-185 (395)
67 PRK10642 proline/glycine betai 99.6 3.8E-14 8.3E-19 155.8 25.1 193 24-222 268-469 (490)
68 PRK11646 multidrug resistance 99.6 6.4E-14 1.4E-18 150.1 23.8 172 12-188 16-188 (400)
69 TIGR00806 rfc RFC reduced fola 99.6 6.3E-14 1.4E-18 151.2 22.8 177 7-190 28-207 (511)
70 PTZ00207 hypothetical protein; 99.6 1.1E-13 2.3E-18 154.7 25.1 197 3-207 25-229 (591)
71 TIGR00896 CynX cyanate transpo 99.6 2.8E-14 6E-19 149.4 17.8 151 23-177 17-167 (355)
72 TIGR00805 oat sodium-independe 99.6 1.4E-14 3E-19 164.4 15.7 179 6-187 33-282 (633)
73 PRK08633 2-acyl-glycerophospho 99.6 9.5E-14 2.1E-18 166.9 23.6 169 23-191 27-205 (1146)
74 PRK10489 enterobactin exporter 99.6 1.4E-13 3.1E-18 147.5 22.1 173 13-190 24-201 (417)
75 PRK15011 sugar efflux transpor 99.6 1.5E-13 3.3E-18 146.4 21.8 177 8-189 17-198 (393)
76 KOG2533 Permease of the major 99.6 1E-13 2.2E-18 152.2 20.3 184 5-190 44-232 (495)
77 TIGR00892 2A0113 monocarboxyla 99.6 7.7E-14 1.7E-18 152.1 19.3 177 5-186 18-195 (455)
78 TIGR00901 2A0125 AmpG-related 99.6 2.3E-13 5.1E-18 142.3 21.5 161 23-189 5-182 (356)
79 PRK11010 ampG muropeptide tran 99.6 7.5E-13 1.6E-17 145.9 25.1 174 10-190 16-199 (491)
80 PRK11902 ampG muropeptide tran 99.5 2.7E-12 5.9E-17 137.2 24.3 172 12-190 5-186 (402)
81 PF06609 TRI12: Fungal trichot 99.5 7.9E-13 1.7E-17 147.3 19.7 161 18-184 56-216 (599)
82 TIGR00902 2A0127 phenyl propri 99.5 1.8E-12 3.9E-17 137.7 21.4 160 11-176 9-170 (382)
83 TIGR00882 2A0105 oligosacchari 99.5 5.3E-12 1.2E-16 134.4 23.4 173 10-189 6-187 (396)
84 TIGR00880 2_A_01_02 Multidrug 99.5 5.7E-13 1.2E-17 118.1 13.3 137 50-188 5-141 (141)
85 KOG2532 Permease of the major 99.5 1E-12 2.3E-17 143.5 17.9 153 35-191 67-222 (466)
86 PRK10207 dipeptide/tripeptide 99.5 1.3E-12 2.9E-17 144.0 18.9 157 12-172 20-181 (489)
87 TIGR00924 yjdL_sub1_fam amino 99.5 2E-12 4.3E-17 142.1 19.6 164 10-177 14-184 (475)
88 PRK11128 putative 3-phenylprop 99.4 5.7E-12 1.2E-16 133.7 20.0 166 14-188 12-181 (382)
89 PRK06814 acylglycerophosphoeth 99.4 1.4E-11 3.1E-16 148.6 24.0 144 43-189 52-198 (1140)
90 TIGR00792 gph sugar (Glycoside 99.4 2.6E-12 5.7E-17 137.9 15.2 161 27-189 21-198 (437)
91 TIGR01299 synapt_SV2 synaptic 99.4 3.5E-11 7.7E-16 138.2 24.1 139 46-188 598-736 (742)
92 PRK09528 lacY galactoside perm 99.4 6.1E-11 1.3E-15 127.4 23.2 170 13-189 17-195 (420)
93 COG0738 FucP Fucose permease [ 99.4 5.5E-11 1.2E-15 125.0 21.0 233 5-243 12-265 (422)
94 KOG2615 Permease of the major 99.4 5.2E-12 1.1E-16 131.3 13.1 114 41-155 66-179 (451)
95 cd06174 MFS The Major Facilita 99.3 1.4E-10 2.9E-15 118.8 21.8 163 15-181 184-348 (352)
96 PRK09584 tppB putative tripept 99.3 8.3E-11 1.8E-15 130.1 21.5 162 12-177 27-193 (500)
97 TIGR00889 2A0110 nucleoside tr 99.3 8.2E-11 1.8E-15 127.0 21.0 162 27-188 229-405 (418)
98 TIGR00889 2A0110 nucleoside tr 99.3 9.6E-11 2.1E-15 126.5 20.8 168 11-190 7-184 (418)
99 PRK15011 sugar efflux transpor 99.3 2.6E-10 5.7E-15 121.6 23.5 154 28-187 238-392 (393)
100 PRK09528 lacY galactoside perm 99.3 6.5E-11 1.4E-15 127.2 18.8 146 41-188 260-406 (420)
101 KOG3764 Vesicular amine transp 99.3 7.7E-12 1.7E-16 130.7 10.9 153 34-188 97-250 (464)
102 TIGR00890 2A0111 Oxalate/Forma 99.3 1.1E-10 2.4E-15 121.1 19.5 150 25-178 224-375 (377)
103 PRK10077 xylE D-xylose transpo 99.3 2.2E-10 4.8E-15 124.6 22.5 163 24-188 289-460 (479)
104 TIGR01301 GPH_sucrose GPH fami 99.3 6.7E-10 1.5E-14 121.8 25.5 169 19-189 17-222 (477)
105 PRK15462 dipeptide/tripeptide 99.3 2.3E-10 5E-15 125.9 21.7 156 18-177 21-181 (493)
106 PRK09556 uhpT sugar phosphate 99.3 3.8E-10 8.2E-15 123.3 21.5 170 10-181 262-445 (467)
107 PRK05122 major facilitator sup 99.3 5.4E-10 1.2E-14 118.8 22.0 159 23-187 233-391 (399)
108 TIGR00879 SP MFS transporter, 99.3 1.7E-10 3.7E-15 123.4 18.1 172 13-188 291-473 (481)
109 PRK11551 putative 3-hydroxyphe 99.2 6.7E-10 1.5E-14 118.2 21.9 156 24-182 238-393 (406)
110 PRK12382 putative transporter; 99.2 5.5E-10 1.2E-14 118.6 21.0 157 23-185 233-389 (392)
111 TIGR02718 sider_RhtX_FptX side 99.2 9.9E-10 2.1E-14 116.7 22.8 177 8-188 3-187 (390)
112 TIGR00899 2A0120 sugar efflux 99.2 2.1E-09 4.5E-14 112.4 22.9 151 30-186 224-374 (375)
113 PRK10489 enterobactin exporter 99.2 9.9E-10 2.1E-14 117.8 19.6 159 26-188 243-402 (417)
114 PRK09874 drug efflux system pr 99.2 1.2E-09 2.7E-14 115.8 19.8 139 44-184 259-397 (408)
115 PRK09952 shikimate transporter 99.2 4.8E-09 1E-13 113.8 24.6 157 29-188 274-435 (438)
116 PRK03545 putative arabinose tr 99.2 3.2E-09 6.9E-14 112.8 22.6 154 27-186 227-381 (390)
117 TIGR00887 2A0109 phosphate:H+ 99.2 9.4E-10 2E-14 121.4 18.7 163 25-188 307-491 (502)
118 PF05977 MFS_3: Transmembrane 99.2 4.3E-09 9.3E-14 117.0 23.5 156 20-179 24-184 (524)
119 TIGR00892 2A0113 monocarboxyla 99.1 1.5E-09 3.2E-14 118.6 18.4 153 23-179 258-415 (455)
120 TIGR00883 2A0106 metabolite-pr 99.1 4E-09 8.6E-14 110.1 20.0 158 14-175 227-391 (394)
121 TIGR00902 2A0127 phenyl propri 99.1 1E-08 2.2E-13 109.0 22.6 153 22-180 221-374 (382)
122 PRK10429 melibiose:sodium symp 99.1 1.7E-09 3.6E-14 118.7 16.9 179 9-189 9-205 (473)
123 TIGR00893 2A0114 d-galactonate 99.1 5.8E-09 1.3E-13 108.3 20.1 165 12-181 221-395 (399)
124 TIGR00897 2A0118 polyol permea 99.1 1.2E-08 2.7E-13 109.1 23.1 162 15-182 231-398 (402)
125 KOG0569 Permease of the major 99.1 5.6E-09 1.2E-13 114.0 20.4 180 7-200 273-463 (485)
126 PRK03699 putative transporter; 99.1 4.9E-09 1.1E-13 111.8 19.7 164 12-180 211-375 (394)
127 PRK03633 putative MFS family t 99.1 1.1E-08 2.4E-13 108.5 22.2 151 23-180 217-367 (381)
128 PRK09705 cynX putative cyanate 99.1 7.8E-09 1.7E-13 110.5 21.0 164 20-189 219-385 (393)
129 TIGR00891 2A0112 putative sial 99.1 6.2E-09 1.3E-13 109.6 19.1 137 29-169 262-400 (405)
130 PRK11273 glpT sn-glycerol-3-ph 99.0 2.4E-08 5.2E-13 108.7 22.7 157 23-183 270-433 (452)
131 COG2807 CynX Cyanate permease 99.0 2.3E-08 5.1E-13 104.1 20.9 156 20-180 26-181 (395)
132 KOG2504 Monocarboxylate transp 99.0 1E-09 2.3E-14 121.4 11.6 177 5-186 45-222 (509)
133 PF13347 MFS_2: MFS/sugar tran 99.0 1.1E-09 2.3E-14 118.4 11.3 159 27-187 23-200 (428)
134 PRK03893 putative sialic acid 99.0 1.1E-08 2.3E-13 112.0 19.2 144 27-174 296-442 (496)
135 PRK12307 putative sialic acid 99.0 2.6E-08 5.6E-13 106.7 21.0 137 25-165 250-388 (426)
136 TIGR00895 2A0115 benzoate tran 99.0 2.3E-08 5.1E-13 104.6 20.2 135 16-152 260-394 (398)
137 PRK15075 citrate-proton sympor 99.0 4.7E-08 1E-12 105.8 22.9 129 22-152 254-388 (434)
138 PRK08633 2-acyl-glycerophospho 99.0 1.3E-08 2.8E-13 122.8 20.4 148 28-178 255-403 (1146)
139 PRK11663 regulatory protein Uh 99.0 2.6E-08 5.6E-13 107.9 20.2 171 13-187 250-426 (434)
140 TIGR00900 2A0121 H+ Antiporter 99.0 3.7E-08 8E-13 101.9 19.9 124 27-152 232-357 (365)
141 PRK10406 alpha-ketoglutarate t 99.0 8.9E-08 1.9E-12 103.5 23.6 153 26-182 263-421 (432)
142 PF11700 ATG22: Vacuole efflux 99.0 8.6E-08 1.9E-12 105.5 23.1 161 23-187 299-469 (477)
143 PRK10504 putative transporter; 99.0 6.1E-08 1.3E-12 105.6 21.4 135 17-153 272-410 (471)
144 TIGR00882 2A0105 oligosacchari 98.9 6.5E-08 1.4E-12 103.0 20.8 140 41-182 252-392 (396)
145 TIGR00788 fbt folate/biopterin 98.9 6.1E-08 1.3E-12 106.5 20.9 174 8-188 28-211 (468)
146 KOG2325 Predicted transporter/ 98.9 4.5E-09 9.8E-14 114.2 11.4 187 4-191 32-235 (488)
147 PF05977 MFS_3: Transmembrane 98.9 7.3E-08 1.6E-12 107.2 21.1 152 25-180 237-389 (524)
148 TIGR00898 2A0119 cation transp 98.9 3.9E-08 8.4E-13 108.1 18.8 134 50-188 362-497 (505)
149 COG2271 UhpC Sugar phosphate p 98.9 3.7E-08 7.9E-13 104.5 17.2 174 7-184 253-433 (448)
150 TIGR00792 gph sugar (Glycoside 98.9 8.9E-08 1.9E-12 102.8 20.6 115 41-155 255-377 (437)
151 PRK09669 putative symporter Ya 98.9 4.1E-08 8.9E-13 106.5 18.2 161 26-188 30-207 (444)
152 PF03825 Nuc_H_symport: Nucleo 98.9 2.7E-07 5.8E-12 99.5 23.8 174 11-189 7-183 (400)
153 PLN00028 nitrate transmembrane 98.9 4.9E-08 1.1E-12 107.3 18.5 146 30-181 277-429 (476)
154 PRK11128 putative 3-phenylprop 98.9 2E-07 4.4E-12 98.9 22.6 145 28-178 227-372 (382)
155 PRK11010 ampG muropeptide tran 98.9 2.7E-07 5.8E-12 102.0 22.9 153 27-183 244-401 (491)
156 TIGR00712 glpT glycerol-3-phos 98.9 8E-08 1.7E-12 104.1 17.8 160 25-188 270-436 (438)
157 TIGR00901 2A0125 AmpG-related 98.9 1.3E-07 2.8E-12 99.0 18.6 118 23-142 226-355 (356)
158 TIGR02718 sider_RhtX_FptX side 98.8 4.1E-07 8.9E-12 96.7 22.3 149 28-180 230-386 (390)
159 PRK15402 multidrug efflux syst 98.8 5E-07 1.1E-11 96.4 22.7 149 28-181 237-391 (406)
160 COG2270 Permeases of the major 98.8 2.7E-07 5.9E-12 98.0 19.2 179 5-188 253-431 (438)
161 TIGR02332 HpaX 4-hydroxyphenyl 98.8 1.6E-07 3.5E-12 101.1 17.6 162 11-174 247-410 (412)
162 PF06813 Nodulin-like: Nodulin 98.8 4.7E-07 1E-11 91.3 18.9 161 21-188 17-184 (250)
163 PRK10054 putative transporter; 98.8 3.1E-07 6.7E-12 98.4 18.5 146 41-189 242-388 (395)
164 TIGR00711 efflux_EmrB drug res 98.8 5E-07 1.1E-11 98.2 20.3 134 17-152 266-404 (485)
165 TIGR00881 2A0104 phosphoglycer 98.8 2.6E-07 5.7E-12 95.8 17.1 151 13-167 223-379 (379)
166 COG0477 ProP Permeases of the 98.8 1E-06 2.2E-11 86.3 20.1 164 12-177 8-177 (338)
167 PRK06814 acylglycerophosphoeth 98.7 2.8E-07 6E-12 111.6 19.5 147 29-178 249-415 (1140)
168 KOG0253 Synaptic vesicle trans 98.7 7.4E-08 1.6E-12 100.3 12.2 182 2-188 325-522 (528)
169 PRK10213 nepI ribonucleoside t 98.7 1.7E-06 3.7E-11 92.6 23.3 147 28-179 239-385 (394)
170 COG2814 AraJ Arabinose efflux 98.7 6.7E-07 1.4E-11 95.4 19.7 156 22-183 228-384 (394)
171 PF11700 ATG22: Vacuole efflux 98.7 1.2E-06 2.6E-11 96.6 22.0 149 42-190 69-252 (477)
172 TIGR00710 efflux_Bcr_CflA drug 98.7 2E-06 4.3E-11 90.1 22.3 119 29-150 229-354 (385)
173 TIGR00894 2A0114euk Na(+)-depe 98.7 5.9E-07 1.3E-11 97.8 18.8 173 10-185 265-450 (465)
174 PRK14995 methyl viologen resis 98.7 8.7E-07 1.9E-11 97.8 20.3 124 27-152 280-407 (495)
175 PRK09848 glucuronide transport 98.7 8.4E-07 1.8E-11 96.3 19.3 129 13-143 15-157 (448)
176 COG2223 NarK Nitrate/nitrite t 98.7 3.1E-07 6.8E-12 97.4 15.2 170 9-182 221-398 (417)
177 PF05631 DUF791: Protein of un 98.7 3.5E-06 7.6E-11 88.3 22.8 154 32-188 60-219 (354)
178 TIGR00903 2A0129 major facilit 98.7 1.7E-06 3.7E-11 92.1 21.0 159 13-181 199-361 (368)
179 PRK11195 lysophospholipid tran 98.7 1.7E-06 3.6E-11 92.7 20.8 145 30-180 230-375 (393)
180 PF07690 MFS_1: Major Facilita 98.7 5.7E-07 1.2E-11 92.6 16.7 126 22-149 222-352 (352)
181 PRK11462 putative transporter; 98.7 2.3E-06 5E-11 93.8 22.1 175 13-189 16-208 (460)
182 PRK10091 MFS transport protein 98.7 2.6E-06 5.5E-11 90.5 21.7 149 28-182 222-373 (382)
183 PRK09848 glucuronide transport 98.7 2.3E-06 4.9E-11 93.0 21.5 128 24-153 246-383 (448)
184 KOG0254 Predicted transporter 98.7 9.9E-07 2.2E-11 97.9 18.8 182 11-204 300-496 (513)
185 PRK11902 ampG muropeptide tran 98.6 3.7E-06 8E-11 89.9 22.1 144 29-180 233-385 (402)
186 PF01306 LacY_symp: LacY proto 98.6 6E-07 1.3E-11 96.5 15.9 172 11-189 12-192 (412)
187 PF03825 Nuc_H_symport: Nucleo 98.6 6.1E-06 1.3E-10 89.0 22.6 174 13-188 214-398 (400)
188 TIGR01272 gluP glucose/galacto 98.6 5.1E-06 1.1E-10 86.4 21.3 154 13-173 147-303 (310)
189 KOG2504 Monocarboxylate transp 98.6 8.1E-07 1.7E-11 98.6 15.6 167 10-180 302-471 (509)
190 PRK11646 multidrug resistance 98.6 3.4E-06 7.4E-11 90.5 19.7 151 27-179 229-382 (400)
191 TIGR00896 CynX cyanate transpo 98.6 4.1E-06 8.9E-11 87.7 19.8 127 23-152 214-342 (355)
192 COG3104 PTR2 Dipeptide/tripept 98.6 9.3E-07 2E-11 95.8 14.4 152 25-180 41-201 (498)
193 KOG2563 Permease of the major 98.6 2E-06 4.3E-11 92.0 16.6 232 2-238 41-290 (480)
194 PRK10429 melibiose:sodium symp 98.5 8E-06 1.7E-10 89.7 21.8 129 23-153 248-388 (473)
195 PRK11102 bicyclomycin/multidru 98.5 1.3E-05 2.7E-10 84.3 22.4 117 31-150 220-341 (377)
196 PRK10473 multidrug efflux syst 98.5 9E-06 2E-10 86.3 21.1 111 31-148 229-339 (392)
197 PRK15034 nitrate/nitrite trans 98.5 5.6E-06 1.2E-10 90.7 19.7 167 13-184 259-453 (462)
198 PRK09669 putative symporter Ya 98.5 1.3E-05 2.9E-10 86.9 22.0 129 24-154 247-384 (444)
199 COG2211 MelB Na+/melibiose sym 98.5 4.2E-06 9.1E-11 91.1 17.3 177 11-189 17-211 (467)
200 PF01306 LacY_symp: LacY proto 98.5 4.2E-06 9.1E-11 90.0 17.1 145 42-188 258-403 (412)
201 PRK10133 L-fucose transporter; 98.5 1.2E-05 2.5E-10 87.7 20.5 144 29-179 282-427 (438)
202 PF13347 MFS_2: MFS/sugar tran 98.5 4.8E-06 1E-10 89.9 17.2 139 12-153 231-379 (428)
203 PRK11043 putative transporter; 98.4 3.9E-05 8.4E-10 81.7 23.2 123 27-152 224-351 (401)
204 KOG4686 Predicted sugar transp 98.4 6.6E-06 1.4E-10 83.3 15.0 169 3-177 264-435 (459)
205 TIGR01272 gluP glucose/galacto 98.4 2.5E-06 5.5E-11 88.7 11.3 97 92-188 6-117 (310)
206 TIGR00924 yjdL_sub1_fam amino 98.3 3.7E-05 8.1E-10 84.7 20.5 137 45-183 314-466 (475)
207 KOG0252 Inorganic phosphate tr 98.3 4.3E-07 9.3E-12 97.2 4.2 188 6-202 304-508 (538)
208 TIGR00886 2A0108 nitrite extru 98.3 7.7E-06 1.7E-10 85.3 13.5 112 30-144 250-365 (366)
209 PRK09584 tppB putative tripept 98.3 5.9E-05 1.3E-09 83.7 20.5 138 46-183 319-477 (500)
210 COG2270 Permeases of the major 98.3 3E-05 6.6E-10 82.7 17.0 149 41-189 56-224 (438)
211 PRK11462 putative transporter; 98.2 0.00027 5.8E-09 77.5 24.2 128 23-152 245-381 (460)
212 PF05978 UNC-93: Ion channel r 98.2 8.3E-05 1.8E-09 69.8 16.5 107 48-155 42-148 (156)
213 PF03209 PUCC: PUCC protein; 98.2 0.00016 3.5E-09 77.1 20.5 119 31-152 5-145 (403)
214 KOG2816 Predicted transporter 98.2 2.3E-05 5E-10 85.9 14.3 170 12-189 28-203 (463)
215 PRK11652 emrD multidrug resist 98.2 0.00027 5.9E-09 75.0 22.2 119 31-152 233-354 (394)
216 TIGR00885 fucP L-fucose:H+ sym 98.2 0.00018 3.8E-09 77.7 20.8 146 27-177 253-404 (410)
217 PF06779 DUF1228: Protein of u 98.1 2.4E-05 5.1E-10 65.7 10.1 81 18-100 4-84 (85)
218 TIGR00926 2A1704 Peptide:H+ sy 98.1 8.6E-05 1.9E-09 84.9 18.1 156 24-181 6-178 (654)
219 COG2211 MelB Na+/melibiose sym 98.1 0.00027 5.8E-09 77.2 20.4 135 14-149 244-387 (467)
220 PF00083 Sugar_tr: Sugar (and 98.1 1.3E-08 2.7E-13 110.1 -13.4 164 26-202 273-447 (451)
221 KOG2532 Permease of the major 98.1 5.2E-05 1.1E-09 83.3 14.3 174 8-188 260-450 (466)
222 TIGR00788 fbt folate/biopterin 98.0 4.3E-05 9.3E-10 84.1 13.0 151 34-187 281-447 (468)
223 PRK10207 dipeptide/tripeptide 98.0 0.00024 5.1E-09 78.7 18.7 136 47-182 313-473 (489)
224 PF03137 OATP: Organic Anion T 98.0 7E-07 1.5E-11 99.8 -1.6 180 9-190 6-255 (539)
225 COG2807 CynX Cyanate permease 98.0 0.00066 1.4E-08 71.4 20.2 161 22-186 224-386 (395)
226 TIGR01301 GPH_sucrose GPH fami 98.0 0.0011 2.4E-08 73.1 22.6 142 48-189 310-475 (477)
227 KOG0255 Synaptic vesicle trans 98.0 0.00053 1.1E-08 76.1 20.4 132 55-189 362-496 (521)
228 KOG3762 Predicted transporter 98.0 4.2E-05 9.1E-10 83.6 10.7 159 18-180 383-542 (618)
229 PF03092 BT1: BT1 family; Int 97.9 0.00018 4E-09 78.4 15.7 158 25-187 9-177 (433)
230 PF01770 Folate_carrier: Reduc 97.8 0.00061 1.3E-08 73.3 16.7 160 26-189 24-185 (412)
231 KOG4686 Predicted sugar transp 97.8 3.3E-06 7.1E-11 85.4 -1.0 150 4-155 42-195 (459)
232 PF03209 PUCC: PUCC protein; 97.8 0.0038 8.3E-08 66.8 21.2 150 29-180 232-393 (403)
233 PF12832 MFS_1_like: MFS_1 lik 97.8 0.00029 6.4E-09 58.1 10.1 71 11-83 5-75 (77)
234 PRK15403 multidrug efflux syst 97.7 0.0048 1.1E-07 66.5 21.2 147 24-176 236-388 (413)
235 KOG2533 Permease of the major 97.6 0.00045 9.8E-09 76.5 12.7 125 8-134 275-405 (495)
236 COG0738 FucP Fucose permease [ 97.5 0.006 1.3E-07 65.1 18.5 157 13-176 243-400 (422)
237 KOG3764 Vesicular amine transp 97.5 0.00027 5.8E-09 75.0 8.1 155 23-181 287-450 (464)
238 PF06609 TRI12: Fungal trichot 97.5 0.0036 7.8E-08 70.7 17.2 145 10-154 314-463 (599)
239 KOG3626 Organic anion transpor 97.5 0.00048 1E-08 78.6 10.2 182 7-190 98-348 (735)
240 PTZ00207 hypothetical protein; 97.4 0.0032 7E-08 71.2 16.3 165 26-191 373-558 (591)
241 KOG3098 Uncharacterized conser 97.3 0.0047 1E-07 67.6 15.5 106 49-155 56-161 (461)
242 KOG0637 Sucrose transporter an 96.9 0.0016 3.4E-08 70.3 6.8 125 26-152 52-199 (498)
243 PRK15462 dipeptide/tripeptide 96.9 0.094 2E-06 58.3 20.1 137 46-182 311-475 (493)
244 TIGR00769 AAA ADP/ATP carrier 96.8 0.23 5E-06 54.9 22.1 129 28-156 25-189 (472)
245 KOG1237 H+/oligopeptide sympor 96.5 0.046 1E-06 61.8 14.9 153 24-180 56-240 (571)
246 KOG2816 Predicted transporter 96.3 0.044 9.6E-07 60.4 12.4 123 31-156 267-390 (463)
247 PF00854 PTR2: POT family; In 96.2 0.028 6.1E-07 59.7 10.1 105 74-180 2-118 (372)
248 KOG3098 Uncharacterized conser 96.1 0.4 8.6E-06 52.7 18.9 107 41-148 277-404 (461)
249 PF06963 FPN1: Ferroportin1 (F 96.0 0.25 5.4E-06 54.0 16.7 128 25-154 277-414 (432)
250 KOG4332 Predicted sugar transp 95.8 0.018 4E-07 58.4 6.2 92 31-125 62-154 (454)
251 KOG2615 Permease of the major 95.7 0.15 3.3E-06 54.3 12.9 117 34-152 290-408 (451)
252 COG3104 PTR2 Dipeptide/tripept 95.4 0.55 1.2E-05 51.7 16.2 136 47-182 328-484 (498)
253 PRK03612 spermidine synthase; 95.2 3.1 6.6E-05 46.7 21.8 143 32-179 41-191 (521)
254 PF02487 CLN3: CLN3 protein; 95.1 0.3 6.6E-06 52.7 13.0 111 42-154 280-393 (402)
255 KOG3574 Acetyl-CoA transporter 94.9 0.96 2.1E-05 48.4 15.5 202 9-215 34-268 (510)
256 PF02487 CLN3: CLN3 protein; 94.2 0.54 1.2E-05 50.8 12.2 136 46-187 62-197 (402)
257 KOG3762 Predicted transporter 93.6 0.044 9.5E-07 60.6 2.7 83 10-94 15-98 (618)
258 PF03092 BT1: BT1 family; Int 93.6 0.6 1.3E-05 51.0 11.6 147 41-188 253-415 (433)
259 PF06963 FPN1: Ferroportin1 (F 93.5 9.5 0.00021 41.8 20.4 74 9-83 5-78 (432)
260 KOG2563 Permease of the major 92.4 0.43 9.2E-06 52.0 7.9 99 42-140 300-403 (480)
261 TIGR00805 oat sodium-independe 91.9 0.85 1.8E-05 52.4 10.2 74 14-89 338-415 (633)
262 PF13000 Acatn: Acetyl-coenzym 91.0 0.5 1.1E-05 52.2 6.7 176 10-189 4-225 (544)
263 PF03219 TLC: TLC ATP/ADP tran 91.0 30 0.00065 38.6 21.3 145 8-156 26-204 (491)
264 KOG3810 Micronutrient transpor 89.2 0.43 9.4E-06 50.4 4.2 138 52-191 51-188 (433)
265 TIGR00939 2a57 Equilibrative N 87.8 5.4 0.00012 43.8 11.9 109 44-153 308-429 (437)
266 KOG1330 Sugar transporter/spin 87.1 1.7 3.7E-05 47.6 7.2 111 29-141 271-394 (493)
267 KOG3097 Predicted membrane pro 86.9 4 8.8E-05 43.0 9.5 138 9-155 32-184 (390)
268 PF01770 Folate_carrier: Reduc 85.7 25 0.00055 38.2 15.4 97 41-137 283-381 (412)
269 KOG4332 Predicted sugar transp 83.8 14 0.00031 38.1 11.5 130 45-180 284-426 (454)
270 TIGR00806 rfc RFC reduced fola 83.3 16 0.00035 40.7 12.7 94 44-137 299-394 (511)
271 COG3202 ATP/ADP translocase [E 83.2 83 0.0018 35.1 17.9 128 28-155 45-207 (509)
272 TIGR00880 2_A_01_02 Multidrug 82.5 21 0.00046 30.4 11.1 46 42-87 86-131 (141)
273 KOG1479 Nucleoside transporter 82.3 34 0.00074 37.1 14.4 160 22-189 34-207 (406)
274 TIGR00939 2a57 Equilibrative N 80.9 60 0.0013 35.6 16.1 81 48-129 50-138 (437)
275 KOG2325 Predicted transporter/ 79.0 4.8 0.0001 44.6 6.9 71 97-167 388-459 (488)
276 PF01733 Nucleoside_tran: Nucl 74.2 1.2 2.7E-05 46.2 0.7 106 47-152 186-304 (309)
277 COG4262 Predicted spermidine s 71.9 1.5E+02 0.0032 32.0 15.0 82 42-123 42-132 (508)
278 KOG3810 Micronutrient transpor 61.8 86 0.0019 33.7 11.0 97 44-140 272-370 (433)
279 TIGR00769 AAA ADP/ATP carrier 54.9 3.4E+02 0.0074 30.2 19.3 71 104-176 274-345 (472)
280 KOG3880 Predicted small molecu 53.8 42 0.00091 35.4 7.1 105 43-152 288-398 (409)
281 KOG3880 Predicted small molecu 52.9 17 0.00037 38.2 4.1 84 45-129 64-147 (409)
282 KOG1479 Nucleoside transporter 51.2 64 0.0014 35.1 8.3 109 43-152 282-399 (406)
283 KOG0637 Sucrose transporter an 49.7 59 0.0013 36.0 7.7 64 52-115 341-404 (498)
284 KOG3626 Organic anion transpor 49.0 64 0.0014 37.7 8.4 76 12-89 398-477 (735)
285 COG5336 Uncharacterized protei 47.8 77 0.0017 27.9 6.7 33 45-77 44-77 (116)
286 PF10225 DUF2215: Uncharacteri 44.7 3.5E+02 0.0076 27.4 12.2 32 93-126 31-62 (249)
287 COG1230 CzcD Co/Zn/Cd efflux s 43.7 4E+02 0.0087 27.8 13.5 80 2-89 21-103 (296)
288 PF03137 OATP: Organic Anion T 39.6 9.8 0.00021 42.9 0.0 73 14-88 313-389 (539)
289 PF07672 MFS_Mycoplasma: Mycop 39.5 32 0.0007 35.1 3.7 60 128-187 2-64 (267)
290 PF12805 FUSC-like: FUSC-like 37.4 3.3E+02 0.0072 27.8 10.9 36 78-113 4-40 (284)
291 COG4769 Predicted membrane pro 35.6 1.6E+02 0.0035 28.0 7.2 46 55-107 86-131 (181)
292 PF02632 BioY: BioY family; I 35.5 2.2E+02 0.0049 26.4 8.4 25 50-74 60-84 (148)
293 COG4721 ABC-type cobalt transp 35.3 4.1E+02 0.0088 25.4 11.3 54 6-61 11-64 (192)
294 PF04833 COBRA: COBRA-like pro 34.8 20 0.00044 34.0 1.3 12 406-417 20-31 (169)
295 PF07672 MFS_Mycoplasma: Mycop 34.2 4.5E+02 0.0098 27.0 10.9 66 46-111 144-219 (267)
296 PF11947 DUF3464: Protein of u 33.4 1.6E+02 0.0035 27.6 7.0 80 65-148 56-146 (153)
297 TIGR00917 2A060601 Niemann-Pic 31.4 1.1E+03 0.025 29.5 16.2 18 103-120 643-660 (1204)
298 TIGR01667 YCCS_YHJK integral m 31.3 7.5E+02 0.016 29.0 13.6 55 62-116 42-101 (701)
299 PF05631 DUF791: Protein of un 29.9 7.2E+02 0.016 26.6 20.1 138 10-149 123-295 (354)
300 PF13000 Acatn: Acetyl-coenzym 28.9 7.1E+02 0.015 28.2 12.0 51 97-147 406-456 (544)
301 TIGR01666 YCCS hypothetical me 27.2 7.9E+02 0.017 28.9 12.8 54 62-115 42-100 (704)
302 cd02435 CCC1 CCC1. CCC1: This 26.3 6.2E+02 0.013 25.4 10.4 10 62-71 198-207 (241)
303 PRK10263 DNA translocase FtsK; 25.4 6.4E+02 0.014 31.8 11.8 20 52-71 61-80 (1355)
304 COG1268 BioY Uncharacterized c 25.0 3.5E+02 0.0077 26.1 7.9 23 50-72 89-111 (184)
305 PF10183 ESSS: ESSS subunit of 25.0 1E+02 0.0022 26.9 4.0 31 159-189 55-85 (105)
306 TIGR00918 2A060602 The Eukaryo 23.6 7.5E+02 0.016 30.9 12.1 18 103-120 465-482 (1145)
307 PF06570 DUF1129: Protein of u 22.7 7E+02 0.015 24.1 12.0 19 162-180 175-193 (206)
308 KOG1237 H+/oligopeptide sympor 22.5 4.6E+02 0.0099 29.9 9.6 64 95-158 457-520 (571)
309 COG3619 Predicted membrane pro 21.9 8.1E+02 0.017 24.5 16.5 30 43-72 55-84 (226)
310 PRK03612 spermidine synthase; 21.9 9.2E+02 0.02 27.1 11.8 18 74-91 149-166 (521)
311 TIGR00926 2A1704 Peptide:H+ sy 21.6 4.9E+02 0.011 30.2 9.7 52 97-148 566-617 (654)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.95 E-value=4e-27 Score=254.92 Aligned_cols=309 Identities=27% Similarity=0.405 Sum_probs=240.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHcCCCCCh----HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIK--------REFHLETEP----TIEGLIVAMSLIGATCITTCSGAIADWL 70 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~--------~~~gls~s~----~~~gli~s~~~lG~iig~~~~G~LsDr~ 70 (560)
+..+.+++++++.|-.||....+++..+.++ +.++...+. ...+.+++++.+|.++|+++.++++||+
T Consensus 8 ~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~ 87 (485)
T KOG0569|consen 8 RLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRF 87 (485)
T ss_pred HHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455666777788889999888887655443 344532232 3568889999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHH
Q 008603 71 GRRPMLIVSSVLYFIGGLVMLW---SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFL 147 (560)
Q Consensus 71 GRR~~lli~~ll~ai~~il~~~---a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~l 147 (560)
|||..++++.++..++.+++.+ .+++.+++++|++.|+..|......+.|+.|.+|.+.||....+.+.+..+|..+
T Consensus 88 GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 88 GRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 9999999999999888888876 4688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhh-hcchHHHHHHHHHHhcCcChHHHHHHHHHHHH
Q 008603 148 AYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVS-KGRMLEAKKVLQSLRGREDVAGEMALLVEGLG 226 (560)
Q Consensus 148 g~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~-~gr~~ea~~~l~~l~~~~~~~~~i~~l~~~l~ 226 (560)
++....--.+.+...|++.+.+..+++++.+++ ++++|||||||.. +++.+||++.++.+++.++.+.+.........
T Consensus 168 ~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~-l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~ 246 (485)
T KOG0569|consen 168 GQVLGLPSLLGTEDLWPYLLAFPLIPALLQLAL-LPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIE 246 (485)
T ss_pred HHHHccHHhcCCCcchHHHHHHHHHHHHHHHHH-HhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHH
Confidence 977776666666778999999999999986654 7889999999988 89999999999999999887776655444433
Q ss_pred hh-----hhhhHHHHHhcccccchh-------hhhhcccccchhhhchhhhhHHhhhhhcccccccccccccchhhHHHH
Q 008603 227 VG-----GETSLEEYIIGPANDLAA-------DQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGSRHGSMVDPLVT 294 (560)
Q Consensus 227 ~g-----~~~t~~~~i~~~~~~~~~-------~~~~~~g~~~i~ly~~~~gl~~i~q~~~G~~~i~l~s~~~S~~~~vv~ 294 (560)
.. ...++.+.+..+..++.. ..++.+|.+.+..|+...-...- +.... +...+....+++
T Consensus 247 ~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG---~~~~~-----a~~an~~~g~v~ 318 (485)
T KOG0569|consen 247 EEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAG---FTPEE-----AQYANLGIGIVN 318 (485)
T ss_pred HhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcC---CCHHH-----HHHHHHHHHHHH
Confidence 32 444666776666665542 56677777777777655321100 00000 112222267788
Q ss_pred Hhhhccc--ccCCCCCcccccccccccc
Q 008603 295 LFGSVHE--KLPDQGSMRSTLFPHFGSM 320 (560)
Q Consensus 295 l~gsi~~--~idriGRR~ll~~g~~G~m 320 (560)
++.++.+ ++||+|||++++.+..+|.
T Consensus 319 ~~~t~~~~~lid~~gRRpLll~~~~~~~ 346 (485)
T KOG0569|consen 319 LLSTLVSPFLIDRLGRRPLLLISLSLMA 346 (485)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 8888888 8999999999999888854
No 2
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.93 E-value=2.5e-25 Score=245.91 Aligned_cols=303 Identities=34% Similarity=0.563 Sum_probs=220.6
Q ss_pred hhHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHcCCCC---Ch--HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH
Q 008603 3 GAALVAIAAAIGNLLQGWD--NATIAGAVLYIKREFHLET---EP--TIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~--~~~~~~~lp~i~~~~gls~---s~--~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~ 75 (560)
...+..+.+.++.+..+++ .....+..+.+.+...... +. .+.++++++..+|+.++.++.|.++|++|||+.
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~ 121 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRKKT 121 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 3455667778888888886 5566666776666442211 11 355899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 76 LIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 76 lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
++++.+++.++.+++++++|+..++++|++.|+|.|....+++.|++|+.|++.||...++.+....+|..++++.....
T Consensus 122 l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 122 LLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999996666444
Q ss_pred HhccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhc--CcChHHHHHHHHHHHHhhh----
Q 008603 156 SLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRG--REDVAGEMALLVEGLGVGG---- 229 (560)
Q Consensus 156 ~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~--~~~~~~~i~~l~~~l~~g~---- 229 (560)
.... .+||..+++..+++++..+. .+++||||+|+.++++.+++++.+.++++ ..+...++..+........
T Consensus 202 ~~~~-~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (513)
T KOG0254|consen 202 SKVY-AGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAE 279 (513)
T ss_pred ccCC-ccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhccc
Confidence 3221 58999999999999998877 89999999999999999999999999999 4455555544441111000
Q ss_pred -hhhHHHHHhcccccchh------hhhhcccccchhhhchhhhhHHhhhhhcccccccccc--cccchhhHHHHHhhhcc
Q 008603 230 -ETSLEEYIIGPANDLAA------DQDISADKDQIKLYGPEEGLSWIARPVTGQSIVGLGS--RHGSMVDPLVTLFGSVH 300 (560)
Q Consensus 230 -~~t~~~~i~~~~~~~~~------~~~~~~g~~~i~ly~~~~gl~~i~q~~~G~~~i~l~s--~~~S~~~~vv~l~gsi~ 300 (560)
.....+...+...+... ..+|.++.+.+.+|.+..- +.. +..+ ...+....++.+++++.
T Consensus 280 ~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-----~~~------g~~~~~~~~~~~~~~v~~~~t~~ 348 (513)
T KOG0254|consen 280 GKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-----KSA------GLKSDTFLASIILGVVNFLGTLV 348 (513)
T ss_pred ccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHH-----Hhc------CCCCchHHHHHHHHHHHHHHHHH
Confidence 00111111100000000 3344444444444433320 000 1111 11222255666666666
Q ss_pred c--ccCCCCCcccccccccc
Q 008603 301 E--KLPDQGSMRSTLFPHFG 318 (560)
Q Consensus 301 ~--~idriGRR~ll~~g~~G 318 (560)
. ++||+|||++++++..+
T Consensus 349 ~~~lvd~~gRr~lll~s~~~ 368 (513)
T KOG0254|consen 349 ATYLVDRFGRRKLLLFGAAG 368 (513)
T ss_pred HHHHHHHhccHHHHHHhHHH
Confidence 6 88999999999999988
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.91 E-value=7.8e-23 Score=225.11 Aligned_cols=207 Identities=19% Similarity=0.266 Sum_probs=173.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-C--CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREF-H--LETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS 79 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~-g--ls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~ 79 (560)
..+.++++++++.++.+++...++..+|.+..++ + ...+..+.+++.+...++.+++.++.|+++||+|||+++.++
T Consensus 13 ~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~ 92 (502)
T TIGR00887 13 QHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGME 92 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH
Confidence 4566777889999999999999999999887753 1 112556789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 80 SVLYFIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 80 ~ll~ai~~il~~~a~s------~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
+++.+++.++++++++ ++.++++|++.|++.|...+..+.+++|++|+++|++++++.+....+|..+++.+..
T Consensus 93 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 93 LIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998888765 7899999999999999999999999999999999999999999999999988876654
Q ss_pred HHHh---------------------ccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchH-HHHHHHHHHhc
Q 008603 154 GMSL---------------------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRML-EAKKVLQSLRG 210 (560)
Q Consensus 154 ~l~~---------------------~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~-ea~~~l~~l~~ 210 (560)
.... ....+||++|.+.++++++.+++ .+++||||||+..++|.+ ++++.+.++..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~~~~~~~~ 250 (502)
T TIGR00887 173 IVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAASDMSAVLQ 250 (502)
T ss_pred HHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHHHHHHHhc
Confidence 4321 01237999999988888775554 578899999999888774 46666666543
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.90 E-value=1e-22 Score=221.31 Aligned_cols=206 Identities=32% Similarity=0.636 Sum_probs=174.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREF--------HLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~--------gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~ 75 (560)
...++++++++.+..+++...+++..|.+++.| +. ++.+.+++.++++++.++++++.|+++||+|||++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~ 87 (479)
T PRK10077 10 IFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESA--ANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDS 87 (479)
T ss_pred HHHHHHHHHHHHHhcCcccceehHhHHHHHHHhcccccccccC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 355677788899999999999999999999988 55 67899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHH
Q 008603 76 LIVSSVLYFIGGLVMLWS------------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV 143 (560)
Q Consensus 76 lli~~ll~ai~~il~~~a------------~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~l 143 (560)
++++.++++++.++++++ +.+..++++|++.|++.|...+.++.+++|++|+++||+++++.+....+
T Consensus 88 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~ 167 (479)
T PRK10077 88 LKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIF 167 (479)
T ss_pred HHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHH
Confidence 999999999888877763 23567889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH------hccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhcCc
Q 008603 144 GMFLAYCMVFGMS------LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRE 212 (560)
Q Consensus 144 G~~lg~li~~~l~------~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~~~ 212 (560)
|.+++++...... .....+||+.|++.+++.++..+ ..+++||+|+++..+++.+++.+...+.....
T Consensus 168 G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~ 241 (479)
T PRK10077 168 GQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILRKIMGNT 241 (479)
T ss_pred HHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHHHHcCCh
Confidence 9988865543332 12346899999999888887654 46778999999888888777776666665443
No 5
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.89 E-value=1.1e-21 Score=224.14 Aligned_cols=207 Identities=21% Similarity=0.303 Sum_probs=184.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
..+.++++++++.++.+++...++.++|.+.+++++ +..+.+++.+++++|.+++.+++|+++||+|||+++++++++
T Consensus 164 ~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~gl--s~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil 241 (742)
T TIGR01299 164 FQWALFFVLGLALMADGVEVFVVGFVLPSAEKDLCI--PDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSV 241 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 356677788888899999999999999999999999 779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh-----
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----- 157 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~----- 157 (560)
.+++.++++++++++.++++|++.|++.|+..++.+.+++|++|++.|++..++.+.++.+|.++++.+...+..
T Consensus 242 ~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~ 321 (742)
T TIGR01299 242 NGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWS 321 (742)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch
Confidence 999999999999999999999999999999999999999999999999999999999999999888765543321
Q ss_pred ------ccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhcCc
Q 008603 158 ------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRE 212 (560)
Q Consensus 158 ------~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~~~ 212 (560)
....+||+.|++.+++.++.+ +..+++||||+|+..++|.+++.+.+++++..+
T Consensus 322 ~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n 381 (742)
T TIGR01299 322 FQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHDEAWMILKLIHDTN 381 (742)
T ss_pred hccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCC
Confidence 122479999999888877654 456789999999999999999999999988754
No 6
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.88 E-value=8.4e-21 Score=203.98 Aligned_cols=185 Identities=22% Similarity=0.201 Sum_probs=168.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.+...+.+++++++.++|...++...|.+.+++++ +..+.|++.+++++++.+++++.|+++||+|||+++.++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGL--SATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHH
Confidence 56778888889999999999999999999999999 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh----cc
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----MT 159 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~----~~ 159 (560)
+++.+++++++|++.+++.|++.|++.+...+....+++|++|+++|++++++.+....+|..+++.+...+.. .+
T Consensus 84 ~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 84 GIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999998766544332 13
Q ss_pred ccchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
..+||++|++.++++++..++.++++||+|+
T Consensus 164 ~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~ 194 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVILGVMTWFWLDDSPD 194 (412)
T ss_pred ccchhHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 4699999999999988877777788899984
No 7
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.88 E-value=6.5e-26 Score=244.66 Aligned_cols=208 Identities=40% Similarity=0.666 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHcCCCC-------ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIK--REFHLET-------EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~--~~~gls~-------s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ 80 (560)
++.++.+..+|+....+...+... ..+..+. +..+.+++.++..+|.++|.++.|.++||+|||+.++++.
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~ 83 (451)
T PF00083_consen 4 IASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISA 83 (451)
T ss_pred eeHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhcccccccccccccccccccccccc
Confidence 456677999999988877766544 2333321 1246789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh
Q 008603 81 VLYFIGGLVMLWSP---NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (560)
Q Consensus 81 ll~ai~~il~~~a~---s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~ 157 (560)
++.+++.++.++++ |++.++++|++.|++.|...+..+.|+.|..|+++|++..++.+.+..+|.+++..+......
T Consensus 84 ~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~ 163 (451)
T PF00083_consen 84 LLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY 163 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999 999999999999999999999999999999999999999999999999999988666544422
Q ss_pred cc-ccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhcCcChHHHH
Q 008603 158 MT-APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEM 218 (560)
Q Consensus 158 ~~-~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~~~~~~~~i 218 (560)
.. ...||..+.+..+++++.++ ..+++||||+|+.+++|.+||++.++++++.+..+.+.
T Consensus 164 ~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~ 224 (451)
T PF00083_consen 164 YSDNWGWRILLIFGAIPSLLVLL-LRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEI 224 (451)
T ss_pred ccccccccccccccccccccccc-cccccccccceecccccccccccccccccccccccccc
Confidence 11 24699999999999987655 45789999999999999999999999977665444443
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.88 E-value=1e-20 Score=207.86 Aligned_cols=189 Identities=20% Similarity=0.312 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHH--HHH--HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTI--EGL--IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~--~gl--i~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~l 81 (560)
.+.+++++++++.+||...++...|.+.++|+.+.++.. .+. +.++.+++..++.++.|+++||+|||+++.++.+
T Consensus 16 ~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 16 KAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 355677889999999999999999999999975433321 222 2477889999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhHHH--------HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 82 LYFIGGLVMLWSPNVYV--------LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 82 l~ai~~il~~~a~s~~~--------lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
+++++++++++++|+.. ++++|+++|++.|...+....+++|++|+++||+..++.+....+|..++..+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999864 8899999999999999999999999999999999999998888888888765543
Q ss_pred HHHh------ccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhh
Q 008603 154 GMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSK 195 (560)
Q Consensus 154 ~l~~------~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~ 195 (560)
.... ....+||++|++.+++.++.+ +..+.+||+|+|+..+
T Consensus 176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~-~~~~~~~esp~~~~~~ 222 (490)
T PRK10642 176 LISTIVGEANFLDWGWRIPFFIALPLGIIGL-YLRHALEETPAFQQHV 222 (490)
T ss_pred HHHHhcCHHHhcCccHHHHHHHHHHHHHHHH-HHHHcCCCChhHHHHH
Confidence 3221 135699999999877666543 3456789999986543
No 9
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.86 E-value=2.8e-20 Score=196.52 Aligned_cols=226 Identities=21% Similarity=0.253 Sum_probs=190.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+.+..++.+.++.|..+...+...+++|.+.+||+. +....|+..+.+.++..++.++...+.||+.||+.++....+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~v--s~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGV--SEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 456778889999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
++++.+++++++||+.++++|++.|+..|.+++....+.+++.|+++|++++++......++.+++ +..+-++.+..|
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~G--vPLGt~ig~~~G 165 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLG--VPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHh--ccHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999 666777788899
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhcCcChHHHHHHHHHHHHhhhhhhHHHHHh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVEGLGVGGETSLEEYII 238 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~~~~~~~~i~~l~~~l~~g~~~t~~~~i~ 238 (560)
||..|++.+.++++.++..+..+| |+... +.+..+.++.++.+ ++...+...+...+.+++..+...|+.
T Consensus 166 WR~~F~~ia~l~ll~~~~~~~~lP--~~~~~-~~~~~~~~~~~~~l---~~p~v~~~l~~t~l~~~g~F~~ftYi~ 235 (394)
T COG2814 166 WRATFLAIAVLALLALLLLWKLLP--PSEIS-GSLPGPLRTLLRLL---RRPGVLLGLLATFLFMTGHFALYTYIR 235 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC--CccCC-CCCCcchhHHHHHh---cCchHHHHHHHHHHHHcchhhhHHhHH
Confidence 999999999999999998888899 21110 11111112222223 233344455555566666666666543
No 10
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.86 E-value=8.3e-20 Score=200.12 Aligned_cols=183 Identities=15% Similarity=0.080 Sum_probs=151.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.........+..++..++.....+.+|.+.+++|+ +..+.+++.+++.++++++.++.|+++||+|||+++.++.++.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~ 111 (476)
T PLN00028 34 HMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNLNL--TKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLT 111 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 44455556666677777777788889999999999 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh--c---
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL--M--- 158 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~--~--- 158 (560)
+++.++++++++++.++++|++.|++.+.. ..+..+++|++|+++||+++++...+.++|..+++.+...... .
T Consensus 112 ~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~ 190 (476)
T PLN00028 112 APAVFCMSLVSSATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG 190 (476)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999998875 4466789999999999999999988877887776554432211 1
Q ss_pred --cccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 159 --TAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 159 --~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
+..+||+.|++.+++.++..++.+++.++.|
T Consensus 191 ~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p 223 (476)
T PLN00028 191 APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLP 223 (476)
T ss_pred CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCC
Confidence 1248999999999998887766666555655
No 11
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.86 E-value=1e-19 Score=191.56 Aligned_cols=188 Identities=23% Similarity=0.281 Sum_probs=164.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+.+....++.++++..+++....++..|.+++++|+ ++.+.+++.++..++..++.++.|.++||+|||++++++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 9 AQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGL--TTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 456777888999999999999999999999999999 779999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
.+++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+...+......+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999876654443222235
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCChhhhh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRWLV 193 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~ 193 (560)
||+.|.+.+++.++.. +.....||+|++..
T Consensus 167 w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~ 196 (405)
T TIGR00891 167 WRALFFISILPIIFAL-WLRKNIPEAEDWKE 196 (405)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhCCCChhHHH
Confidence 9999988776666543 34566788876543
No 12
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.85 E-value=3e-19 Score=196.52 Aligned_cols=185 Identities=17% Similarity=0.147 Sum_probs=167.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH
Q 008603 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (560)
Q Consensus 1 m~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ 80 (560)
|.+.++++++++++.|+...|.+.++..+|.+.+++|. +..+.+++.+++.++..++.++.|+++||+|||++++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~--s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~ 78 (495)
T PRK14995 1 MFRQWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGA--SGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGG 78 (495)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 66778889999999999999999999999999999999 7799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc
Q 008603 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (560)
Q Consensus 81 ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~-p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~ 159 (560)
++++++.+++++++|++.++++|+++|++.+...+.....+.+.+ |+++|++++++......+|..+++.+. ..+.+
T Consensus 79 ~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lg--g~l~~ 156 (495)
T PRK14995 79 TLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVG--GILLE 156 (495)
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhc
Confidence 999999999999999999999999999999998888877777765 679999999999999999999995544 55566
Q ss_pred ccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
..+||+.|++...+.++..++..+++||.|
T Consensus 157 ~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 157 HFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 789999999988888887777777788865
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.85 E-value=2.3e-19 Score=190.90 Aligned_cols=188 Identities=27% Similarity=0.307 Sum_probs=167.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+.+.+.+++.+..++.+++....+...|.+.+++|. ++.+.+++.++..++.+++.++.|+++||+|||+++.++.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEFGL--DVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHH
Confidence 566777888889999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
..++.+++.++++++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+. ....+..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~ 167 (406)
T PRK11551 90 FGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIG--VLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999886554 34455678
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCChhhhhh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRWLVS 194 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~ 194 (560)
||+.|++.+++.++.+++..+++||+|++..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQA 199 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhc
Confidence 99999998887777666666778999876543
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.84 E-value=3.7e-19 Score=192.04 Aligned_cols=188 Identities=23% Similarity=0.281 Sum_probs=151.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CChHHH---HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE-TEPTIE---GLIVAMSLIGATCITTCSGAIADWLGRRPMLIV 78 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls-~s~~~~---gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli 78 (560)
+.++.++.+++++++.++|...++...|.+.++++.+ .+..+. +.+.+..+++..++++++|+++||+|||+++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~ 98 (432)
T PRK10406 19 RRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLI 98 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHH
Confidence 4455667778899999999999999999999998531 133433 334455556666999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHH
Q 008603 79 SSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYC 150 (560)
Q Consensus 79 ~~ll~ai~~il~~~a~s~~--------~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~l 150 (560)
+.++++++++++++++++. .++++|+++|++.|...+....+++|++|+++||+..++.+.....|.+++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~ 178 (432)
T PRK10406 99 SVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALL 178 (432)
T ss_pred HHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988763 68899999999999999999999999999999999999988888888887765
Q ss_pred HHHHHHh------ccccchhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 151 MVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 151 i~~~l~~------~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
....+.. ....+||++|++.+++.++..+ ....+||+|++
T Consensus 179 ~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~ 224 (432)
T PRK10406 179 VVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ 224 (432)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH
Confidence 4433221 1256999999998888877543 35567898764
No 15
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.84 E-value=1.9e-19 Score=192.45 Aligned_cols=206 Identities=40% Similarity=0.717 Sum_probs=169.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLE------TEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLI 77 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls------~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~ll 77 (560)
.+...+++.++.++..++.....+.+|.+..+++.+ .+..+.+++.+++.++..++.++.|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 444555667777888899999999999888888874 34799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH-H
Q 008603 78 VSSVLYFIGGLVMLWSP---NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV-F 153 (560)
Q Consensus 78 i~~ll~ai~~il~~~a~---s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~-~ 153 (560)
++.++.+++.+++.+.. +++.+++.|++.|++.+...+....+++|++|+++|++++++.+....+|..+++.+. .
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999988886543 4568999999999999999999999999999999999999999999999999997766 2
Q ss_pred HHHhccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhc
Q 008603 154 GMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRG 210 (560)
Q Consensus 154 ~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~ 210 (560)
........+||+.|++.++..++.. +..+++||+|+++..+++.+++.+...+...
T Consensus 186 ~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (481)
T TIGR00879 186 KVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARKSLARLRG 241 (481)
T ss_pred hhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHHHHHHHhC
Confidence 1333356799999999776666544 4467789999887777666665555555443
No 16
>PRK03545 putative arabinose transporter; Provisional
Probab=99.83 E-value=9.3e-19 Score=185.91 Aligned_cols=182 Identities=19% Similarity=0.199 Sum_probs=156.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.+...+.+.++.++.........+.+|.+.+++|. ++.+.+++.+.+.++..++.++.|.++||+|||+++.++.++.
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 84 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSFHM--QTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLF 84 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 44455566666666555555566678999999999 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
+++.+++.+++|++.++++|+++|++.+...+....+++|++|+++|++++++.+...++|..+++.+.. ...+..+|
T Consensus 85 ~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~--~l~~~~gw 162 (390)
T PRK03545 85 IASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGR--VIGQYLGW 162 (390)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHH--HHHHHhcH
Confidence 9999999999999999999999999999988999999999999999999999999999999999865543 33456699
Q ss_pred hHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
|+.|++.+++.++..++..+.+||.|
T Consensus 163 ~~~f~~~~~~~~l~~~~~~~~~~~~~ 188 (390)
T PRK03545 163 RTTFLAIGGGALITLLLLIKLLPLLP 188 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999988887666566677764
No 17
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.83 E-value=8.2e-19 Score=187.80 Aligned_cols=183 Identities=23% Similarity=0.339 Sum_probs=157.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.....+.+.++++..+++.....+.+|.+++++|+ ++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGL--TDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 34456777888889999999999999999999999 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
+++.++++++++++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.+. ....+..+|
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~--~~l~~~~~w 171 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFM--PSFAEAYGW 171 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHH--HHHcccCCH
Confidence 999999999999999999999999999999999999999999999999999999999999998885443 333456799
Q ss_pred hHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
|+.|++..++.++.+ +.....||++++
T Consensus 172 ~~~f~i~~~~~~~~~-~~~~~~p~~~~~ 198 (426)
T PRK12307 172 RAAFFVGLLPVLLVI-YIRARAPESKEW 198 (426)
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCChHH
Confidence 999988665544432 223345776654
No 18
>TIGR00898 2A0119 cation transport protein.
Probab=99.83 E-value=3.7e-20 Score=203.06 Aligned_cols=179 Identities=30% Similarity=0.514 Sum_probs=157.6
Q ss_pred HHHHHHHHHcCCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 008603 27 GAVLYIKREFHLET-EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLL 105 (560)
Q Consensus 27 ~~lp~i~~~~gls~-s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l 105 (560)
+..|.+.++++++. ++.+.+++.+++.+|.+++.++.|+++||+|||++++++.++.+++.++++++++++.++++|++
T Consensus 110 ~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l 189 (505)
T TIGR00898 110 TFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLL 189 (505)
T ss_pred cccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 34677888999931 17899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheec
Q 008603 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYL 185 (560)
Q Consensus 106 ~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~l 185 (560)
.|++.+...+....+++|++|+++|+.+.++.+....+|.++++.+.... .+||+.|++.+++.++..++. +++
T Consensus 190 ~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~-----~~wr~~~~~~~i~~~~~~~~~-~~~ 263 (505)
T TIGR00898 190 VGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI-----PDWRWLQLAVSLPTFLFFLLS-WFV 263 (505)
T ss_pred HHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 99999999999999999999999999999999999999988886554322 249999999999988776654 788
Q ss_pred cCChhhhhhhcchHHHHHHHHHHhcC
Q 008603 186 PESPRWLVSKGRMLEAKKVLQSLRGR 211 (560)
Q Consensus 186 pEsP~~L~~~gr~~ea~~~l~~l~~~ 211 (560)
||+|+|+..+++.+++.+.+++..+.
T Consensus 264 ~esp~~l~~~~~~~~a~~~l~~~~~~ 289 (505)
T TIGR00898 264 PESPRWLISQGRIEEALKILQRIAKI 289 (505)
T ss_pred CCChHHHHHCCCHHHHHHHHHHHHHH
Confidence 99999999999999888887776543
No 19
>PRK09952 shikimate transporter; Provisional
Probab=99.82 E-value=6.8e-19 Score=190.66 Aligned_cols=187 Identities=20% Similarity=0.269 Sum_probs=149.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHc--CCCCChHHHHHHH-----HHHHHHHHHHHHHHHHHHhhhCChHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVL-YIKREF--HLETEPTIEGLIV-----AMSLIGATCITTCSGAIADWLGRRPML 76 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp-~i~~~~--gls~s~~~~gli~-----s~~~lG~iig~~~~G~LsDr~GRR~~l 76 (560)
....+.+.+++++.++|....+...| .+.+++ +. ++. .+++. ++.+++..++.++.|+++||+|||+++
T Consensus 21 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 21 RRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQV--SPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 34566778899999999999888877 456666 56 444 45543 345566788999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHH
Q 008603 77 IVSSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (560)
Q Consensus 77 li~~ll~ai~~il~~~a~s~~--------~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg 148 (560)
+++.++++++++++++++++. .++++|+++|++.|...+....+++|++|+++|++..+..+....+|..++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999986 588999999999999999999999999999999999999999889998887
Q ss_pred HHHHHHHHh------ccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhh
Q 008603 149 YCMVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSK 195 (560)
Q Consensus 149 ~li~~~l~~------~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~ 195 (560)
..+...+.. ....+||++|++.+++.++. ++.....||+|+|..++
T Consensus 178 ~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~ 229 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQ 229 (438)
T ss_pred HHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHH
Confidence 544433221 12469999999988877654 33355689999876544
No 20
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.81 E-value=2.2e-18 Score=187.26 Aligned_cols=179 Identities=20% Similarity=0.324 Sum_probs=162.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~ 86 (560)
+++.++++.++..++....+..+|.+.+++|. ++.+.+++.+.+.++.+++.++.|+++||+|||+.++++.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 80 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDLGS--SLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 45677788899999999999999999999999 7799999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Q 008603 87 GLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (560)
Q Consensus 87 ~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~ 166 (560)
.++++++++++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+. ....+..+||+.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~--~~l~~~~~w~~~ 158 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLG--GWIIENYHWRWI 158 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccH--hHhccCcCceeh
Confidence 999999999999999999999999999999999999999999999999999999999999985544 445567799999
Q ss_pred HHHHHHHHHHHHHhhheeccCCh
Q 008603 167 LGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 167 f~i~ai~~ll~~il~~~~lpEsP 189 (560)
|++.+++.++..++..++.||.+
T Consensus 159 f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 159 FLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhhHHHHHHHHHHHHHcCCcc
Confidence 99998888877776666777754
No 21
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.81 E-value=3.4e-18 Score=179.24 Aligned_cols=177 Identities=18% Similarity=0.263 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il 89 (560)
.+.+..++.........+.+|.+.+++|. ++.+.+++.+++.++..++.++.|+++||+|||+.+.++.++.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~ 86 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAADLST--PASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLG 86 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHH
Confidence 33334455667778888889999999999 7899999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH
Q 008603 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (560)
Q Consensus 90 ~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i 169 (560)
+.++++++.+++.|++.|++.+...+....++.|.+|+++|++.+++.+....+|..+++.+.. ...+..+||..|++
T Consensus 87 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~--~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 87 LALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGG--YILVWLSWHAIFAF 164 (385)
T ss_pred HHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999988865543 34455689999999
Q ss_pred HHHHHHHHHHhhheeccCChh
Q 008603 170 LFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 170 ~ai~~ll~~il~~~~lpEsP~ 190 (560)
.+++.++..++.+++.||+++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 165 LSLAGILLSALIFFILPETLP 185 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 988888877766667787653
No 22
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.81 E-value=5.5e-18 Score=179.80 Aligned_cols=177 Identities=16% Similarity=0.226 Sum_probs=155.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
....++.+..++......+.+|.+.+++|. +..+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 83 (382)
T PRK10091 6 LSLALGTFGLGMAEFGIMGVLTELAHDVGI--SIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNA 83 (382)
T ss_pred HHHHHHHHHHHhhHHHHHhChHHHHHHcCC--CHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 355567777788888888899999999999 779999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
++++++|++.+++.|++.|++.+...+....++.|++|+++|++++++......+|..+++.+. ....+..+||+.|+
T Consensus 84 l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~gwr~~f~ 161 (382)
T PRK10091 84 MFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLG--TYLSQEFSWRYTFL 161 (382)
T ss_pred HHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHH--HHHhhhccHHHHHH
Confidence 9999999999999999999999998888889999999999999999999888889888885443 34445679999999
Q ss_pred HHHHHHHHHHHhhheeccCCh
Q 008603 169 VLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 169 i~ai~~ll~~il~~~~lpEsP 189 (560)
+.+++.++.++..++++||.+
T Consensus 162 ~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 162 LIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred HHHHHHHHHHHHHHHhCCCCC
Confidence 999888877666666788864
No 23
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.80 E-value=5.9e-18 Score=176.68 Aligned_cols=178 Identities=22% Similarity=0.155 Sum_probs=146.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
+.+++++..........+.+| ++++++|+ ++.+.+++.++..++.+++.++.|+++||+|||+.++++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 82 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGL--STAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCL 82 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCC--CHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 456666777777788888999 49999999 889999999999999999999999999999999999999999999999
Q ss_pred HHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc--------c
Q 008603 89 VMLWSP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--------T 159 (560)
Q Consensus 89 l~~~a~-s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~--------~ 159 (560)
++.+++ +++.+++.|++.|++.+.. +....+++|++|+++|++++++...+.++|..+++.+...+... .
T Consensus 83 ~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~ 161 (366)
T TIGR00886 83 WAGLAVQSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPA 161 (366)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 999999 9999999999999996654 66788999999999999999999988888887776655433321 1
Q ss_pred ccchhHHH-HHHHHHHHHHHHhhheeccCChh
Q 008603 160 APSWRLML-GVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 160 ~~~Wr~~f-~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
..+||+.| ++.+++.++..++..++.+|.|+
T Consensus 162 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (366)
T TIGR00886 162 HLAWGWAFVIVPAGILLLPALLIFFVGADTPP 193 (366)
T ss_pred cccccchhHHHHHHHHHHHHHHHHHhcccCCc
Confidence 34899999 44455555555555566677663
No 24
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.80 E-value=1.7e-18 Score=179.67 Aligned_cols=163 Identities=21% Similarity=0.212 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 008603 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (560)
Q Consensus 22 ~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii 101 (560)
....++.+|++.+++|+ +..+.+++.+++.++..++.++.|.++||+|||+++.++.++.+++.++++++++++.+++
T Consensus 19 ~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (377)
T TIGR00890 19 VYTWTLLAPPLGRYFGV--GVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYL 96 (377)
T ss_pred HhhhhhHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55677889999999999 8899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhh
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~ 181 (560)
+|++.|++.+...+....++.+++| ++|++++++......+|..++..+.. ...+..+||+.|++.+++.++..++.
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLIT--SVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHH--HHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888888899887 57999999999988888776533322 22345689999999999888877766
Q ss_pred heeccCCh
Q 008603 182 IFYLPESP 189 (560)
Q Consensus 182 ~~~lpEsP 189 (560)
++++++.|
T Consensus 174 ~~~~~~~~ 181 (377)
T TIGR00890 174 AFLIGYPP 181 (377)
T ss_pred HHheecCc
Confidence 66666654
No 25
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.80 E-value=6.7e-18 Score=179.33 Aligned_cols=168 Identities=18% Similarity=0.126 Sum_probs=141.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 008603 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (560)
Q Consensus 20 ~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~l 99 (560)
.....+++.+|.+++++|+ ++.+.|++.+++.+++.+++++.|+++||+|||++++.+.+..+.+.+.....+++..+
T Consensus 5 ~~~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 5 AIWVTFSPVLSLVAEDIDV--SKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHHHHHhhHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 3446678889999999999 88999999999999999999999999999999998776655555544333344799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
+++|++.|++.+.. ......++|++|+++|++++++.+....+|..+++++... ..+..+||+.|++.++++++..+
T Consensus 83 ~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~--l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 83 LACQLLAALGQPFL-LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLK--IYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHhHhHHH-HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccchHHHHHHHHHHHHHHHH
Confidence 99999999999964 5566677999999999999999999999999999665544 34567999999999999888887
Q ss_pred hhheeccCChhhh
Q 008603 180 LTIFYLPESPRWL 192 (560)
Q Consensus 180 l~~~~lpEsP~~L 192 (560)
+.++++||+|++.
T Consensus 160 ~~~~~lp~~p~~~ 172 (368)
T TIGR00903 160 LVLAALPALPFQA 172 (368)
T ss_pred HHHHHcCCCCCCC
Confidence 7788899998763
No 26
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.80 E-value=2.9e-18 Score=178.22 Aligned_cols=172 Identities=16% Similarity=0.173 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 008603 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP 94 (560)
Q Consensus 15 ~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~ 94 (560)
+++..++...++...|.+.+++|. ++.+.+++.++..++.+++.++.|.++||+|||+++.++.++.+++.+++++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDLGL--SAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhhCC--ChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 456677888888899999999999 779999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Q 008603 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (560)
Q Consensus 95 s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ 174 (560)
+++.++++|++.|++.+...+....+++|++|+++|++.+++.+....+|..+++.+... ..+..+||+.|.+.+++.
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--l~~~~~~~~~~~~~~~~~ 158 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGW--ILIHFSWQWAFIIEGVLG 158 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHH--HHHhCCchHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998655533 345568999999999988
Q ss_pred HHHHHhhheeccCChh
Q 008603 175 LIYFVLTIFYLPESPR 190 (560)
Q Consensus 175 ll~~il~~~~lpEsP~ 190 (560)
++..++..++.||+|+
T Consensus 159 ~~~~~~~~~~~~~~~~ 174 (399)
T TIGR00893 159 IIWGVLWLKFIPDPPQ 174 (399)
T ss_pred HHHHHHhhheecCCCC
Confidence 8877776777777653
No 27
>TIGR00895 2A0115 benzoate transport.
Probab=99.79 E-value=5.9e-18 Score=177.22 Aligned_cols=188 Identities=29% Similarity=0.383 Sum_probs=163.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.+...+.+.+..+..+++........|.+.+++|. ++.+.+++.+...++.+++.++.|+++||+|||+++.++.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGFAAPAISAEWGL--DPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhccCC--CHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHH
Confidence 34455566667778888888888899999999999 7799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
+++.+++.++++++.+++.|++.|++.+...+....+++|.+|+++|++++++.+....+|..+++.+. ....+..+|
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~--~~l~~~~g~ 170 (398)
T TIGR00895 93 SVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA--GWLIPVFGW 170 (398)
T ss_pred HHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH--HHHhhcccc
Confidence 999999999999999999999999999999999999999999999999999999999999999986554 334456789
Q ss_pred hHHHHHHHHHHHHHHHhhheeccCChhhhhhh
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLPESPRWLVSK 195 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~ 195 (560)
+..|++.+++.++..++..+++||+|++..++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPESIDFLVSK 202 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCCChHHHhc
Confidence 99999987777776666677889988765444
No 28
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.79 E-value=7.4e-18 Score=182.17 Aligned_cols=182 Identities=16% Similarity=0.154 Sum_probs=160.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
.+.+...+++++..++....+..+|.+.+++|+ ++.+.+++.+++.++..++.++.|+++||+|||+++.++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLADLGL--SRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 455566777888888888888899999999999 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 86 ~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
+.+++.++++++.+++.|++.|++.|...+....+++|++|+++|++++++.+....+|..+++.+... ..+..+||+
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~--l~~~~gw~~ 178 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGA--IALHYGWRY 178 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHcccHHH
Confidence 999999999999999999999999998889999999999999999999999999999999998655433 345679999
Q ss_pred HHHHHHHHHHHHHHhhheeccCChhh
Q 008603 166 MLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 166 ~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
.|++.+++.++..++..+++||+|++
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~ 204 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQA 204 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhh
Confidence 99999888777666556677888764
No 29
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.79 E-value=3.3e-18 Score=186.66 Aligned_cols=185 Identities=18% Similarity=0.004 Sum_probs=157.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.+.+...+++++++...+....+...|.+.+++|+ +.++.|++.+++.+++.++.++.|+++||+|||+++.++.++.
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~ 104 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGL--STTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILS 104 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHH
Confidence 34456677778888888999999999999999999 7899999999999999999999999999999999998888887
Q ss_pred HHHHHHHHh-----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc
Q 008603 84 FIGGLVMLW-----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (560)
Q Consensus 84 ai~~il~~~-----a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~ 158 (560)
++..+++++ +++++.++++|++.|++.+...+....+++|++|+++||+++++.+...++|..++..+.......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~ 184 (467)
T PRK09556 105 AICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANY 184 (467)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHh
Confidence 777766654 589999999999999999999899999999999999999999999999999999986665433221
Q ss_pred -cccchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 159 -TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 159 -~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
...+||..|.+.+++.++..++.+++.++.|+
T Consensus 185 ~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~ 217 (467)
T PRK09556 185 FFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPE 217 (467)
T ss_pred hccCcchhHHHHHHHHHHHHHHHHHHhCCCChh
Confidence 12369999999888888877766777787774
No 30
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.79 E-value=1.8e-17 Score=176.76 Aligned_cols=184 Identities=17% Similarity=0.233 Sum_probs=160.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+.++..+.+.++.+...++...+.+.+|.+.++++. ++.+.++..+.+.++..++.++.|.++||+|||++++++.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~ 87 (406)
T PRK15402 10 QALLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNA--GAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAF 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHH
Confidence 556677778888888888888888899999999999 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
.+++.+++.++++++.+++.|++.|++.+...+..+.++.|.+|+++|++.+++......+|..+++.+.. ...+..+
T Consensus 88 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~l~~~~~ 165 (406)
T PRK15402 88 FILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGA--ALIHVLP 165 (406)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHccC
Confidence 99999999999999999999999999999888888999999999999999999888777788888755543 3344568
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
||+.|++.+++.++.++..++..||+++
T Consensus 166 w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 166 WRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 9999999998888877766667788754
No 31
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=2.3e-18 Score=180.82 Aligned_cols=187 Identities=16% Similarity=0.144 Sum_probs=173.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
.++-+.+.+.+++...++.+-..+...|.+.++.++ |.++.|++.+.+.+.+.++.+++|.++||.++|+.+.+++++
T Consensus 26 ~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~l--sk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLil 103 (448)
T COG2271 26 WRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGL--SKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLIL 103 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHH
Confidence 456677889999999999999999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
.++..+++.++++++.+.+..+++|+.+|...|.|...+..++|+++||+..++.+.+.++|..+.+.+........+.+
T Consensus 104 sai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~ 183 (448)
T COG2271 104 SAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGG 183 (448)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999988866664344445569
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
||..|+++++++++..++.++.++|+|+.
T Consensus 184 w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 184 WRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999953
No 32
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.78 E-value=3.4e-17 Score=178.98 Aligned_cols=184 Identities=23% Similarity=0.339 Sum_probs=160.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.+.....++++.++..++....++.+|.+.+++|+ ++.+.+++.+.+.++.+++.++.|+++||+|||++++++.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~ 95 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGL--TTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLF 95 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45567788889999999999999999999999999 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
+++.+++.++++++.+++.|++.|++.+...+....++.|.+|+++|++.+++......+|..+++.+.. ...+..+|
T Consensus 96 ~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~--~l~~~~~w 173 (496)
T PRK03893 96 SVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYS--LVVPVWGW 173 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhccCCH
Confidence 9999999999999999999999999999999999999999999999999999999999999999865553 34457799
Q ss_pred hHHHHHHHHHHHHHHHhhheeccCChhhh
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLPESPRWL 192 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lpEsP~~L 192 (560)
|+.|++..++.++ .++.....||++++.
T Consensus 174 ~~~f~~~~~~~~~-~~~~~~~~p~~~~~~ 201 (496)
T PRK03893 174 RALFFIGILPIIF-ALWLRKNLPEAEDWK 201 (496)
T ss_pred HHHHHHHHHHHHH-HHHHHHhCCCchhhh
Confidence 9999876554444 333345668876553
No 33
>PRK15075 citrate-proton symporter; Provisional
Probab=99.78 E-value=1.8e-17 Score=179.08 Aligned_cols=183 Identities=23% Similarity=0.321 Sum_probs=142.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHH-HHHHHH-----HHHHHHHHHHHHHHHhhhCChHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEG-LIVAMS-----LIGATCITTCSGAIADWLGRRPMLIV 78 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~g-li~s~~-----~lG~iig~~~~G~LsDr~GRR~~lli 78 (560)
+.....++++.++.++|...++...|.+.++++. ++.+.+ +..+.. .++..++.++.|+++||+|||+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTFFP--AGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHH
Confidence 3467788899999999999999999999999998 444433 322222 23335788999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHH
Q 008603 79 SSVLYFIGGLVMLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYC 150 (560)
Q Consensus 79 ~~ll~ai~~il~~~a~s~~--------~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~l 150 (560)
+.++..++.+++++++++. .++++|++.|++.+...+....+++|++|+++|++.+++.+...++|..+++.
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999876 46899999999999998888999999999999999999998888888777655
Q ss_pred HHHHHHh------ccccchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 151 MVFGMSL------MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 151 i~~~l~~------~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
+...... .+..+||+.|++..++.++ .++.....||+++
T Consensus 172 ~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~-~~~~~~~~~e~~~ 216 (434)
T PRK15075 172 LGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPF-IFLIRRSLEETEE 216 (434)
T ss_pred HHHHHHHhCCHHHHhccchHHHHHHHHHHHHH-HHHHHHhcCCCHH
Confidence 5443321 2456999999876554332 2222334566543
No 34
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.77 E-value=7.8e-17 Score=172.26 Aligned_cols=183 Identities=14% Similarity=0.109 Sum_probs=158.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+.+...+++.++.+..........+.+|.+.+++|. ++++.++..+++.++..+++++.|.++||+|||++++++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~ 94 (394)
T PRK10213 17 PNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDLGI--SEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVL 94 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHH
Confidence 455556666666666666666666788999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
.+++.+++.++++++.++++|++.|++.+...+....+++|++|+++|++++++.....++|..+++.+.. ...+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~--~l~~~~g 172 (394)
T PRK10213 95 LTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGS--FLGELIG 172 (394)
T ss_pred HHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999865553 4445679
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
||+.|++.+++.++..++.....||+|
T Consensus 173 w~~~f~~~~~l~~~~~l~~~~~~p~~~ 199 (394)
T PRK10213 173 WRNVFNAAAVMGVLCIFWIIKSLPSLP 199 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCC
Confidence 999999988877776555455578765
No 35
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.77 E-value=2.1e-19 Score=190.15 Aligned_cols=187 Identities=21% Similarity=0.282 Sum_probs=172.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH
Q 008603 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (560)
Q Consensus 1 m~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ 80 (560)
|++..+.++++++.+++...|..++....+.+++.||+ +++..|++...+.+..++..|++|+++||+.||+++.++.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni--~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNI--SDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCC--CchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHH
Confidence 45677888999999999999999999999999999999 7799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 008603 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (560)
Q Consensus 81 ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~ 160 (560)
.++.++++..+++..||.++++|.+.|+|.+.+.++++.+++|++|..+|+++.+++++...+|..+|++....+.....
T Consensus 106 ~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 106 FIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998665533332222
Q ss_pred cchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
.||+.|...+++++++.+++.++.+|.+|
T Consensus 186 -~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 186 -WWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred -ceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 39999999999999999999999988754
No 36
>PRK10133 L-fucose transporter; Provisional
Probab=99.76 E-value=1.4e-16 Score=173.08 Aligned_cols=149 Identities=17% Similarity=0.133 Sum_probs=134.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
.++.++.+++.+++.+++.....+.+|.+++++++ ++.+.+++.+.+.+++.++.++.|+++||+|||+++.++.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~--s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~ 101 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTL--TNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLY 101 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 45556677788889999999999999999999999 7899999999999999999999999999999999999999999
Q ss_pred HHHHHHH---HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 84 FIGGLVM---LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 84 ai~~il~---~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
+++.+++ .++++++.++++|+++|++.|...+.++.++.|..|.++|...+++.+..+.+|..+++++...
T Consensus 102 ~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 102 ALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999775 4688999999999999999999999999999998888877778999999999999998766543
No 37
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.76 E-value=7.3e-17 Score=171.18 Aligned_cols=166 Identities=19% Similarity=0.285 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 008603 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (560)
Q Consensus 20 ~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~l 99 (560)
.......+.+|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||+.++++.++.+++.+++.++++++.+
T Consensus 17 ~~~~~~~~~lp~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~ 94 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNA--SEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLF 94 (392)
T ss_pred HHHHHHhhhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 3334455779999999999 77999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
++.|++.|++.+...+....++.|.+|+++|++.+++.+....+|..+++.+.. ...+..+||+.|++.+++.++..+
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~--~l~~~~g~~~~~~~~~~~~~i~~~ 172 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGH--LIMLKFPWQSLFYTMAAMGILVLL 172 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCcChHHHHHHHHHHHHHHHH
Confidence 999999999999988999999999999999999999999998888888865543 333456899999999988888777
Q ss_pred hhheeccCCh
Q 008603 180 LTIFYLPESP 189 (560)
Q Consensus 180 l~~~~lpEsP 189 (560)
+..+++||++
T Consensus 173 ~~~~~~~~~~ 182 (392)
T PRK10473 173 LSLFILKETR 182 (392)
T ss_pred HHHHHcCCCC
Confidence 7667778864
No 38
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.76 E-value=8.4e-17 Score=174.92 Aligned_cols=219 Identities=12% Similarity=0.018 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~-~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
..+....+++++.+......+++.+.+.+ ++++ ++++.+++.++..+++.+.+++.|.++||+|+|+++.++.++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~l--s~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNF--TTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 34556677778888888999998888776 8999 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh--
Q 008603 85 IGGLVMLWS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-- 157 (560)
Q Consensus 85 i~~il~~~a-----~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~-- 157 (560)
+.++.++++ ++++.+++.|++.|++ +..++.....+++++|+++||+++++....+++|..+++.+.+....
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~ 190 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP 190 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 999999887 8999999999999998 66778899999999999999999999988888888776665543221
Q ss_pred -c-------------cccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhcCcChHHHHHHHHH
Q 008603 158 -M-------------TAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVE 223 (560)
Q Consensus 158 -~-------------~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~~~~~~~~i~~l~~ 223 (560)
. +..+||.++++..++.++..++.+++.++.|. ++.+ .++.+. -.++.+.|+..+.+
T Consensus 191 l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~---~~~~---~~~~~~---vlk~~~~Wllslly 261 (462)
T PRK15034 191 VFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS---SRAS---IADQLP---VLQRLHLWLLSLLY 261 (462)
T ss_pred HHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc---cccC---HHHHHH---HhCCCchhHHHHHH
Confidence 0 13358888888888888777776777666542 0111 111222 23344568888888
Q ss_pred HHHhhhhhhHHHH
Q 008603 224 GLGVGGETSLEEY 236 (560)
Q Consensus 224 ~l~~g~~~t~~~~ 236 (560)
...++....+..+
T Consensus 262 ~~tFG~fvg~s~~ 274 (462)
T PRK15034 262 LATFGSFIGFSAG 274 (462)
T ss_pred HHHHHHHHHHHHH
Confidence 8888777766543
No 39
>PRK03699 putative transporter; Provisional
Probab=99.76 E-value=9.7e-17 Score=170.96 Aligned_cols=175 Identities=11% Similarity=0.084 Sum_probs=152.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+++.+.+.++++.++.+.+....+..+|.+.+++|+ +.++.+++.+...++..++.++.|+++||+|||+++.++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~--s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYFNL--PVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 345566677888889989888889999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
.+++.++++++++++.+++.|++.|++.+...+....++.|.+|+++|++.+++.+....+|..+++.+.... .....+
T Consensus 82 ~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-~~~~~g 160 (394)
T PRK03699 82 MILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL-LARSIE 160 (394)
T ss_pred HHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccc
Confidence 9999999999999999999999999999998888899999999999999999988888888877775544222 234569
Q ss_pred hhHHHHHHHHHHHHHHHh
Q 008603 163 WRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il 180 (560)
||+.|.+.+++.++..++
T Consensus 161 w~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 161 WYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988887776554
No 40
>PRK10504 putative transporter; Provisional
Probab=99.76 E-value=8e-17 Score=175.20 Aligned_cols=180 Identities=22% Similarity=0.315 Sum_probs=158.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
...+.++++.++..++....++.+|.+.+++|. ++.+.+++.+.+.++..++.++.|+++||+|||++++.+.++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGE--SPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 345667788888999999999999999999999 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 86 ~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
+.+++.++++++.++++|++.|++.+...+....++.|.+|+++|+++.++.....++|..+++.+. ....+..+||+
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~--g~l~~~~gw~~ 165 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALG--GLLVEYASWHW 165 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHH--HHHHhhccHHH
Confidence 9988889999999999999999999999999999999999999999999999999999999986554 34445679999
Q ss_pred HHHHHHHHHHHHHHhhheeccCCh
Q 008603 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 166 ~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
.|.+.....++..++.....|+.+
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999988877776666666666543
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.76 E-value=2.4e-16 Score=169.67 Aligned_cols=179 Identities=19% Similarity=0.326 Sum_probs=155.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~ 87 (560)
...+.+..++...+.....+.+|.+.++++. +..+.++..+++.++..++.++.|+++||+|||++++++.++.+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~~~~~--~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~ 95 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVRDFNA--DVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLAC 95 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHH
Confidence 3344555566667778888889999999999 77999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHH
Q 008603 88 LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (560)
Q Consensus 88 il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f 167 (560)
+++.++++++.++++|+++|++.+...+....++.|.+|+++|++.+++......+|..+++.+... ..+..+||+.|
T Consensus 96 ~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~--l~~~~gw~~~f 173 (413)
T PRK15403 96 AATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAA--LMHFVHWKVLF 173 (413)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCHHHHH
Confidence 9999999999999999999999987777778889999999999999999999999999998665533 34557999999
Q ss_pred HHHHHHHHHHHHhhheeccCChh
Q 008603 168 GVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 168 ~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
++.+++.++..++.++.+||+++
T Consensus 174 ~~~~~~~~i~~~~~~~~lp~~~~ 196 (413)
T PRK15403 174 AIIAVMGLIAFVGLLLAMPETVK 196 (413)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcc
Confidence 99999888877666667898753
No 42
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.75 E-value=7.5e-17 Score=172.12 Aligned_cols=165 Identities=16% Similarity=0.240 Sum_probs=138.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
..++++.+..-. ....++.+|.+++++|. +..+.+++.+.+.++..++.++.|+++||+|||+++..+.++++++.+
T Consensus 13 ~~~~~~~~~~~~-~~~~~~~lp~i~~~~~~--s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~ 89 (393)
T PRK09705 13 VLVLIGLNMRPL-LTSVGPLLPQLRQASGM--SFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGAL 89 (393)
T ss_pred HHHHHHHHcchh-hhccchhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 344444443322 25667889999999999 789999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc-cchhHHH
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLML 167 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~-~~Wr~~f 167 (560)
+++++++++.+++.|++.|++.+...+..+.++.+++| ++|++++++......+|..++..+...+ .+. .+||..+
T Consensus 90 ~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l--~~~~~~w~~~~ 166 (393)
T PRK09705 90 MRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWL--VQHSETWYQTL 166 (393)
T ss_pred HHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCHHHHH
Confidence 99999999999999999999999999999999999997 7899999999988888888886655332 233 4899988
Q ss_pred HHHHHHHHHHHH
Q 008603 168 GVLFIPSLIYFV 179 (560)
Q Consensus 168 ~i~ai~~ll~~i 179 (560)
.+.+++.++..+
T Consensus 167 ~~~~~~~~~~~~ 178 (393)
T PRK09705 167 AWWALPAVVALF 178 (393)
T ss_pred HHHHHHHHHHHH
Confidence 777666554433
No 43
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.75 E-value=8.5e-17 Score=169.07 Aligned_cols=165 Identities=17% Similarity=0.292 Sum_probs=147.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 008603 21 DNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLL 100 (560)
Q Consensus 21 ~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~li 100 (560)
......|.+|.+.+++|+ ++.+.+++.+++.++..++.++.|.++||+|||+.+.++.++.+++.+++.++++++.++
T Consensus 6 ~~~~~~p~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 6 AIDMYLPALPVIAADFGV--SAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 345667889999999999 889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
+.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+.. ...+..+||+.|++.+++.++..++
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGG--WLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHcChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999865543 3345568999999988888887766
Q ss_pred hheeccCCh
Q 008603 181 TIFYLPESP 189 (560)
Q Consensus 181 ~~~~lpEsP 189 (560)
..++.||++
T Consensus 162 ~~~~~~~~~ 170 (377)
T PRK11102 162 VFFFIPETL 170 (377)
T ss_pred HHHhCCccC
Confidence 667778764
No 44
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.75 E-value=1.4e-16 Score=164.78 Aligned_cols=167 Identities=12% Similarity=0.066 Sum_probs=145.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~ 90 (560)
+.++.++..+........+|.+..+++. ++.+.+++.++..++.+++.++.|+++||+|||++++++.++.+++.++.
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLAGTG--SASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 3456667777777788888988899988 88999999999999999999999999999999999999999998888888
Q ss_pred Hhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 91 LWSP-----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 91 ~~a~-----s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
.+++ +++.+++.|++.|++.+...+....+++|++|+++|++.+++.+....+|..+++.+.. ...+..+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~--~l~~~~g~~~ 159 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGG--LMYATLGIKW 159 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHH--HHHHHhhHHH
Confidence 8877 99999999999999999999999999999999999999999999999999999965543 3345568999
Q ss_pred HHHHHHHHHHHHHHhh
Q 008603 166 MLGVLFIPSLIYFVLT 181 (560)
Q Consensus 166 ~f~i~ai~~ll~~il~ 181 (560)
.|++.++..++..++.
T Consensus 160 ~~~~~~~~~~~~~~~~ 175 (365)
T TIGR00900 160 AIWVDAVGFAISALLI 175 (365)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988887776655443
No 45
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.75 E-value=2.5e-17 Score=182.03 Aligned_cols=165 Identities=32% Similarity=0.508 Sum_probs=144.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~ 120 (560)
+.....+..+++++|.++|+++.|+++|++|||+++++++++.+++.++.++++|++.+++.|++.|++.+...+++..+
T Consensus 116 ~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~ 195 (521)
T KOG0255|consen 116 SSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGL 195 (521)
T ss_pred cHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhh
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHH
Q 008603 121 ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLE 200 (560)
Q Consensus 121 isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~e 200 (560)
++|+++++.|+.+.++ ......+..+.+...... . .+||+.+++..+++++.+++ +++.||||||+..++|.++
T Consensus 196 ~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~--~--~~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~ 269 (521)
T KOG0255|consen 196 VAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYI--T--RDWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDE 269 (521)
T ss_pred heeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHH--H--hhHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHH
Confidence 9999999999999999 544444444443222222 1 28999999999999987766 6777799999999999999
Q ss_pred HHHHHHHHhcC
Q 008603 201 AKKVLQSLRGR 211 (560)
Q Consensus 201 a~~~l~~l~~~ 211 (560)
+.+.+++..+.
T Consensus 270 a~~~l~~~a~~ 280 (521)
T KOG0255|consen 270 AIKILKKIAKL 280 (521)
T ss_pred HHHHHHHHHhh
Confidence 99999887654
No 46
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.75 E-value=5.6e-17 Score=167.22 Aligned_cols=174 Identities=29% Similarity=0.495 Sum_probs=151.1
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~ 90 (560)
+++.++..++.....+.+| ++.+++|. ++.+.+++.+++.++..++.++.|.++||+|||++++++.++.+++.++.
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGL--SPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTT--TSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHh
Confidence 5667778888888888999 89999999 77999999999999999999999999999999999999999999996666
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHH
Q 008603 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (560)
Q Consensus 91 ~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ 170 (560)
.++++.+.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+. ....+..+||+.|++.
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~--~~l~~~~~~~~~~~~~ 157 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLG--GFLISYFGWRWAFLIS 157 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHH--HHCCCHCHHCCHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchh--hhhhhccccccccccc
Confidence 67688889999999999999999999999999999999999999999999999999995544 4455677899999999
Q ss_pred HHHHHHHHHhhheeccCCh
Q 008603 171 FIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 171 ai~~ll~~il~~~~lpEsP 189 (560)
+++.++.+++..++.++.|
T Consensus 158 ~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 158 AILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHCCC---S
T ss_pred cchhhhhhhhHhhhhhhcc
Confidence 9999998776555665544
No 47
>PRK11043 putative transporter; Provisional
Probab=99.74 E-value=4.4e-16 Score=165.74 Aligned_cols=175 Identities=19% Similarity=0.246 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
+.+.+..++..+......|.+|.+.+++|. ++++.+++.+++.++..++.++.|+++||+|||+.+.++.++.+++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 86 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQT--SASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSL 86 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHH
Confidence 333333445556677778888999999999 889999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
++.++++++.+++.|++.|++.+...+....++.|.+|++++++..+.......+|..+++.+.. ...+..+||+.|+
T Consensus 87 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~l~~~~g~~~~~~ 164 (401)
T PRK11043 87 GMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGA--WLLNHFGWQAIFA 164 (401)
T ss_pred HHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcCChHHHHH
Confidence 99999999999999999999988887888889999999999999888888778888888855543 3445679999999
Q ss_pred HHHHHHHHHHHhhheeccCC
Q 008603 169 VLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 169 i~ai~~ll~~il~~~~lpEs 188 (560)
+.+++.++..++..+ ++|+
T Consensus 165 ~~~~~~~~~~~~~~~-~~~~ 183 (401)
T PRK11043 165 TLFAITLLLILPTLR-LKPS 183 (401)
T ss_pred HHHHHHHHHHHHHHH-cCCC
Confidence 998888876655443 4444
No 48
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.73 E-value=4e-16 Score=169.52 Aligned_cols=181 Identities=15% Similarity=0.131 Sum_probs=148.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
.+...+++.......+.......+|++.++ |+ ++.+.+++.+++.++.+++.++.|+++||+|||++++++.++.++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~--s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i 105 (452)
T PRK11273 29 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GF--SRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAA 105 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CC--CHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHH
Confidence 334445555556666666677788998888 99 789999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHH-HHHHHHHHHHhccc
Q 008603 86 GGLVMLWSP----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMF-LAYCMVFGMSLMTA 160 (560)
Q Consensus 86 ~~il~~~a~----s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~-lg~li~~~l~~~~~ 160 (560)
+.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++|++++++.+....+|.. .+++...... ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~--~~ 183 (452)
T PRK11273 106 VMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA--WF 183 (452)
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--Hh
Confidence 988887753 7888899999999999988888888899999999999999999888888864 4443322222 23
Q ss_pred cchhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
.+||+.|++.+++.++..++..+++||+|+.
T Consensus 184 ~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~ 214 (452)
T PRK11273 184 NDWHAALYMPAFAAILVALFAFAMMRDTPQS 214 (452)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCHhh
Confidence 4899999999988888777777888998764
No 49
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=2.2e-17 Score=169.80 Aligned_cols=202 Identities=21% Similarity=0.271 Sum_probs=172.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
+-..+.+.+++....+-......+.|.....+|+ +.-+..+++...++|..+++...|.++|++|||+.+.+......
T Consensus 77 ~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w~~--s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~ 154 (528)
T KOG0253|consen 77 WYLFFVAGMGWMADAMEMMLLSLILPALDEVWGP--SEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTG 154 (528)
T ss_pred hhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhch--hhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHH
Confidence 3344556666666655555566677888888998 77999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchh
Q 008603 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWR 164 (560)
Q Consensus 85 i~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr 164 (560)
+..++...++|+..+++.|.+.|+|.|+ .+...++-.|..|...|...+-+. .++.+|.++..++..+. ..+.+||
T Consensus 155 v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~v--m~~~gwr 230 (528)
T KOG0253|consen 155 VFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGV--MSNFGWR 230 (528)
T ss_pred HHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHH--HHhhhHH
Confidence 9999999999999999999999999999 677888889999999999998888 88899999886666444 3466999
Q ss_pred HHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhcCcC
Q 008603 165 LMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRGRED 213 (560)
Q Consensus 165 ~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~~~~ 213 (560)
|..+....|..+.+. ..+++|||||+++.+|+++||.+.++++.+.|.
T Consensus 231 ~~l~~~~~pl~~~a~-f~~w~~ESpRf~~~~G~~~kAletL~kiArmNg 278 (528)
T KOG0253|consen 231 YLLFTSSTPLMFAAR-FLVWVYESPRFYLAKGDDYKALETLHKIARMNG 278 (528)
T ss_pred HHHHHHHhHHHHHHH-HHhhcccCcchhhhcCChHHHHHHHHHHHHhcC
Confidence 998888877766544 478899999999999999999999999887664
No 50
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.73 E-value=9.8e-17 Score=168.65 Aligned_cols=232 Identities=19% Similarity=0.182 Sum_probs=186.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+....+....++..+.++.....+++.+.+++++++ |+.|.++++++..+...+.+++.|.+.||+|.|++..++.++
T Consensus 11 ~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~L--S~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGL--SEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLL 88 (417)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--CHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHH
Confidence 344555666677777888888999999999999999 889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc
Q 008603 83 YFIGGLVMLWSP---NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (560)
Q Consensus 83 ~ai~~il~~~a~---s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~ 159 (560)
.++-++..+++. +++.+++++++.|++.+-+ ++...+++.++|++++|.+++++. ++|+|..+.+++.+.....-
T Consensus 89 ~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~ 166 (417)
T COG2223 89 LLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF 166 (417)
T ss_pred HHHHHHHHHHHccCCchHHHHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH
Confidence 999999988865 4569999999999987766 777889999999999999999999 99999998877776554322
Q ss_pred cc-chhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHHHHHHHHhc-CcChHHHHHHHHHHHHhhhhhhHHHHH
Q 008603 160 AP-SWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAKKVLQSLRG-REDVAGEMALLVEGLGVGGETSLEEYI 237 (560)
Q Consensus 160 ~~-~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~~~l~~l~~-~~~~~~~i~~l~~~l~~g~~~t~~~~i 237 (560)
.. .|+....+..++.++.+++.+++..|.|....+.++.. . .+++. .++.+.|...+.+..++|.+..+..++
T Consensus 167 g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~-~----~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l 241 (417)
T COG2223 167 GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL-P----AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYL 241 (417)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc-h----hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 11 39999999999999988888899999886421111111 1 12222 235667889999999999999987776
Q ss_pred hccccc
Q 008603 238 IGPAND 243 (560)
Q Consensus 238 ~~~~~~ 243 (560)
..+.++
T Consensus 242 ~~~~~~ 247 (417)
T COG2223 242 PMYLVT 247 (417)
T ss_pred HHHHHH
Confidence 554443
No 51
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.73 E-value=5e-17 Score=168.80 Aligned_cols=174 Identities=21% Similarity=0.209 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 008603 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~ 92 (560)
+++++..++....+...|++.+++|+ +..+.+++.++..++.+++.++.|+++||+|||++++++.++.+++.+++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 79 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEIGL--SKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGF 79 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHhCC--CHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHH
Confidence 35677778888889999999999999 7799999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHH-HHHHHHhccccchhHHHHHHH
Q 008603 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYC-MVFGMSLMTAPSWRLMLGVLF 171 (560)
Q Consensus 93 a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~l-i~~~l~~~~~~~Wr~~f~i~a 171 (560)
+++++.+++.|++.|++.+...+....+++|++|+++|++.+++.+....+|..+++. ... ......+||+.|++.+
T Consensus 80 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~ 157 (379)
T TIGR00881 80 STSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF--GIAELYSWHWVFIVPG 157 (379)
T ss_pred hhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHH--HHHhcCCchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998863 322 2334568999999999
Q ss_pred HHHHHHHHhhheeccCChh
Q 008603 172 IPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 172 i~~ll~~il~~~~lpEsP~ 190 (560)
++.++..++.+++.||+|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~ 176 (379)
T TIGR00881 158 IIAIIVSLICFLLLRDSPQ 176 (379)
T ss_pred HHHHHHHHHHheeeCCCcc
Confidence 8888877777778888764
No 52
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.73 E-value=1.1e-16 Score=167.00 Aligned_cols=177 Identities=25% Similarity=0.375 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHH-----HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 008603 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAM-----SLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 15 ~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~-----~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il 89 (560)
++...++...++...+++.+++..+.+..+.+.+.+. .+++..++.++.|+++||+|||++++++.++..++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~ 81 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLL 81 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3567788888888888888886532234555554433 33444578899999999999999999999999999999
Q ss_pred HHhhhhHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh----
Q 008603 90 MLWSPNVY--------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL---- 157 (560)
Q Consensus 90 ~~~a~s~~--------~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~---- 157 (560)
+++++++. .+++.|+++|++.+...+..+.+++|.+|+++|++.+++.+....+|..+++.+......
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~ 161 (394)
T TIGR00883 82 IGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGD 161 (394)
T ss_pred HhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 99988864 588899999999999999999999999999999999999999999999988765543321
Q ss_pred --ccccchhHHHHHHHHHHHHHHHhhheeccCChhhh
Q 008603 158 --MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWL 192 (560)
Q Consensus 158 --~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L 192 (560)
....+||+.|.+.+++.++..+ .....||+|++.
T Consensus 162 ~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 197 (394)
T TIGR00883 162 DALLEWGWRIPFLVSAVLVLIGLY-LRRNLEETPVFE 197 (394)
T ss_pred HHhhccchHHHHHHHHHHHHHHHH-HHHhcCCChhHH
Confidence 1356899999888777665443 345567876543
No 53
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.72 E-value=6.6e-16 Score=164.10 Aligned_cols=169 Identities=14% Similarity=0.153 Sum_probs=141.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
....+.+..++...+.....+.+|. +++++|. ++.+.|++.+++.++.++++++.|.++||+|||++++++.++.++
T Consensus 16 ~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (399)
T PRK05122 16 RIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGF--SAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCAL 93 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHH
Confidence 4445667777777778888888885 6889999 789999999999999999999999999999999999999998888
Q ss_pred HHHHHHhh--------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh
Q 008603 86 GGLVMLWS--------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (560)
Q Consensus 86 ~~il~~~a--------~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~ 157 (560)
+.+++.++ .+++.+++.|++.|++.+...+....++.|.+|+++|++++++.+....+|..+++.+. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~--~~l 171 (399)
T PRK05122 94 SGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG--VLL 171 (399)
T ss_pred HHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH--HHH
Confidence 76665543 25678999999999999999999999999999999999999999888888888885544 344
Q ss_pred ccccchhHHHHHHHHHHHHHHH
Q 008603 158 MTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 158 ~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
.+..+||..+++..+..++..+
T Consensus 172 ~~~~g~~~~~~~~~~~~~~~~~ 193 (399)
T PRK05122 172 YHWGGLAGLGLLIMLLALLGLL 193 (399)
T ss_pred HHcccHHHHHHHHHHHHHHHHH
Confidence 4567899998887776655443
No 54
>PRK12382 putative transporter; Provisional
Probab=99.71 E-value=1.6e-15 Score=160.82 Aligned_cols=167 Identities=14% Similarity=0.154 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
.++.+.++.++.........+.+|. +.+++|+ ++.+.|++.+++.++..+++++.|+++||+|||+.++++.++.++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~--s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~ 93 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGF--GNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGL 93 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHH
Confidence 3444555666666667777788874 6789999 789999999999999999999999999999999999998887776
Q ss_pred HHHHHHh--------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh
Q 008603 86 GGLVMLW--------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (560)
Q Consensus 86 ~~il~~~--------a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~ 157 (560)
+.+.+.+ .++++.++++|++.|++.+...+....++.|.+|+++|++++++.+....+|..+++.+. ...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~--~~l 171 (392)
T PRK12382 94 AGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLG--LLL 171 (392)
T ss_pred HHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHH--HHH
Confidence 6543321 357889999999999999998888889999999999999999999998889988886554 333
Q ss_pred ccccchhHHHHHHHHHHHHH
Q 008603 158 MTAPSWRLMLGVLFIPSLIY 177 (560)
Q Consensus 158 ~~~~~Wr~~f~i~ai~~ll~ 177 (560)
....+||..+.+..+..++.
T Consensus 172 ~~~~g~~~~~~~~~~~~~~~ 191 (392)
T PRK12382 172 HSHFGFAALALTTMVLPLLA 191 (392)
T ss_pred HhccChHHHHHHHHHHHHHH
Confidence 45568998877665554443
No 55
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.71 E-value=2e-15 Score=160.27 Aligned_cols=184 Identities=18% Similarity=0.221 Sum_probs=154.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
+......++.+..++..+......+.+|.+.+++|. ++.+.+++.+++.++.+++.++.|+++||+|||+.++++.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADMARDLNV--REGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHH
Confidence 344444445555555556667777889999999999 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
.+++.+++.++++++.+++.|++.|++.+...+....+..|.++.++|++++++.+....++..+++.+.. ...+..+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~--~l~~~~g 160 (394)
T PRK11652 83 FILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGG--LLTTLFG 160 (394)
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhccC
Confidence 99999999999999999999999999999888888889999999999999999988888888888855543 3345568
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
||+.|++.+++.++..++..++.||+|.
T Consensus 161 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (394)
T PRK11652 161 WRACYLFLLLLGAGVTFSMARWMPETRP 188 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccCc
Confidence 9999999888877766666667888754
No 56
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.71 E-value=1.3e-15 Score=161.59 Aligned_cols=178 Identities=20% Similarity=0.215 Sum_probs=148.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCh---HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEP---TIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~---~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
..+.++.++.++......+.+|.+.+++|.+... ...|++.++..++..++.++.|+++||+|||+.++++.++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 96 (408)
T PRK09874 17 TVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGI 96 (408)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHH
Confidence 3445677777888888888999999999984322 2358899999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 86 ~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
+.+++.++++++.+++.|++.|++.+. .+....++.+.+|+++|++++++......+|..+++.+.. ...+..+||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~l~~~~~~~~ 173 (408)
T PRK09874 97 VMVLMGLAQNIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG--LLADSYGLRP 173 (408)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHH--HHHHHhCHHH
Confidence 999888899999999999999998654 5777788999999999999999999999999988865553 3344568999
Q ss_pred HHHHHHHHHHHHHHhhheeccCCh
Q 008603 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 166 ~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
.|++.+++.++..++..+++||.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~ 197 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENF 197 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc
Confidence 999999888877776667777764
No 57
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.71 E-value=1.1e-15 Score=162.08 Aligned_cols=152 Identities=17% Similarity=0.141 Sum_probs=137.4
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH
Q 008603 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (560)
Q Consensus 1 m~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ 80 (560)
|++.....+.+.++.++...+.....+.+|.+.+++|. +..+.|++.+.+.++..+++++.|+++||+|||+.+.++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~--s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~ 78 (381)
T PRK03633 1 MSTYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHL--PTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLAS 78 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 55544556666788888889899999999999999999 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 81 ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
++.+++.++++++++++.++++|++.|++.+...+.....+.+..++++|++++++.+...++|..+++.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999888888888899999999999999999999999998665533
No 58
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.70 E-value=1.2e-16 Score=168.93 Aligned_cols=190 Identities=21% Similarity=0.277 Sum_probs=156.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-----CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH
Q 008603 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREF-HLE-----TEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM 75 (560)
Q Consensus 2 ~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~-gls-----~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~ 75 (560)
|+.....+++.+++|+..||.+.++.+.|.+...+ +-+ ..+...+.+..+.++|.++|++++|++.|++|||++
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~v 116 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKV 116 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhh
Confidence 45667788899999999999999999999877765 222 356788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHH
Q 008603 76 LIVSSVLYFIGGLVMLWSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (560)
Q Consensus 76 lli~~ll~ai~~il~~~a~-------s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg 148 (560)
+...++++++++++++++. -.++++..|++.|+|.|+-+|...+.++|.+..+.||...+..-.+..+|...+
T Consensus 117 YG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG 196 (538)
T KOG0252|consen 117 YGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAG 196 (538)
T ss_pred hhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhc
Confidence 9999999999999777642 257888999999999999999999999999999999999988777666666665
Q ss_pred HHHHHHHHhc-----c--------ccchhHHHHHHHHHHHHHHHhhheeccCChhhh
Q 008603 149 YCMVFGMSLM-----T--------APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWL 192 (560)
Q Consensus 149 ~li~~~l~~~-----~--------~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L 192 (560)
..+...+... + ..-||..|.+.++|+++.+.. ...+|||+++-
T Consensus 197 ~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~ 252 (538)
T KOG0252|consen 197 GIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYT 252 (538)
T ss_pred cHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHH
Confidence 4444333210 1 125999999999999886654 67789999875
No 59
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.70 E-value=1.3e-15 Score=159.36 Aligned_cols=175 Identities=19% Similarity=0.219 Sum_probs=142.2
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLI-VSSVLYFIGGLVM 90 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~ll-i~~ll~ai~~il~ 90 (560)
+.+++.++......+.+|. +++++|. ++.+.|++.+++.++.++..++.|.++||+|||+.++ .+.++.+++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRA--RPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHH
Confidence 4567777878888887774 6788999 7899999999999999999999999999999887655 4556666777888
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhH--hhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLL--NTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 91 ~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~--~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
+++++++.+++.|++.|.+.+...+....++.|..|++.|+.. ++......++|..+++.+. ....+..+||+.|+
T Consensus 82 ~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~--~~l~~~~~~~~~f~ 159 (375)
T TIGR00899 82 AWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLA--FWLALGFGFTVMFL 159 (375)
T ss_pred HhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHH--HHHHHhcccHHHHH
Confidence 8899999999999999888887778888889999888777654 5777777888888885544 33445668999999
Q ss_pred HHHHHHHHHHHhhheeccCChhh
Q 008603 169 VLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 169 i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
+.+++.++..++.++++||.|+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 160 TAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred HHHHHHHHHHHHHHHhCCCcccC
Confidence 99998888777767778988754
No 60
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.70 E-value=1.7e-15 Score=163.86 Aligned_cols=183 Identities=14% Similarity=0.103 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
+...+...+++.....+........|++++ +|+ ++++.+++.+++.++..++.++.|+++||+|||++++++.++.+
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~g~--s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~ 102 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYLVE-QGF--SKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHHHH-cCC--CHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHH
Confidence 334455555666666666666777888776 588 78999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 008603 85 IGGLVMLWS----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (560)
Q Consensus 85 i~~il~~~a----~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~ 160 (560)
++.+++.+. +++..+++.|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+.... ....
T Consensus 103 ~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~-~~~~ 181 (438)
T TIGR00712 103 AVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLG-MAWF 181 (438)
T ss_pred HHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHH-HHHh
Confidence 888877654 46778889999999999998888889999999999999999999999999888875444322 2223
Q ss_pred cchhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
.+||..|++.+++.++..++.++++||+|+.
T Consensus 182 ~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~ 212 (438)
T TIGR00712 182 NDWHAALYFPAICAIIVALFAFAMMRDTPQS 212 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhccCCHHh
Confidence 5899999999999888777777788988754
No 61
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.69 E-value=4.8e-15 Score=159.64 Aligned_cols=179 Identities=16% Similarity=0.122 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~ 86 (560)
..+.+++.+++.++.+....+.+|.+++++|+ +..+.|++.+.+.+++++++++.|+++||+|||+.++++.++++++
T Consensus 4 ~~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~--s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g 81 (410)
T TIGR00885 4 PFALITSLFALWGFANDITNPMVPQFQQAFTL--TAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALG 81 (410)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 34567788888999999999999999999999 8899999999999999999999999999999999999999999999
Q ss_pred HHHHHh---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc----
Q 008603 87 GLVMLW---SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT---- 159 (560)
Q Consensus 87 ~il~~~---a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~---- 159 (560)
.+++.. .++++.+++.|++.|++.|...+....++.+..|+++|++..++.+...++|..+++.+...+....
T Consensus 82 ~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~ 161 (410)
T TIGR00885 82 AFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQ 161 (410)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 888654 4589999999999999999999999999999999999999999999999999999977765553221
Q ss_pred --------------------ccchhHHHHHHHHHHHHHHHhhh-eeccC
Q 008603 160 --------------------APSWRLMLGVLFIPSLIYFVLTI-FYLPE 187 (560)
Q Consensus 160 --------------------~~~Wr~~f~i~ai~~ll~~il~~-~~lpE 187 (560)
..+||+.|.+.+++.++..++.. ...||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~ 210 (410)
T TIGR00885 162 SQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPA 210 (410)
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 23699999988887777554432 22454
No 62
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.68 E-value=3e-16 Score=170.70 Aligned_cols=185 Identities=16% Similarity=0.224 Sum_probs=159.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HcCCCCChHHHHHHHHHHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKR----------------------EFHLETEPTIEGLIVAMSLIGATCIT 60 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~----------------------~~gls~s~~~~gli~s~~~lG~iig~ 60 (560)
.++.+.+.++++..+...+....+...+.+.+ ++++ ++.+.|++.+++.++++++.
T Consensus 16 ~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~~~~~~~~ 93 (465)
T TIGR00894 16 FRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKW--SGALQGLILSSHFYGQIIIQ 93 (465)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCC--CHHHhhHHHHHHHHHHHHHH
Confidence 45677778888888888888888887777766 6777 78999999999999999999
Q ss_pred HHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHH
Q 008603 61 TCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ 138 (560)
Q Consensus 61 ~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a--~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~ 138 (560)
++.|+++||+|||+++.++.++.+++.+++.++ .+++.+++.|++.|++.+...+....+++|++|+++|++++++..
T Consensus 94 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 173 (465)
T TIGR00894 94 IPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMST 173 (465)
T ss_pred cchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 999999999999999999999998888877543 568889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccc-cchhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 139 FTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 139 ~~~~lG~~lg~li~~~l~~~~~-~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
....+|..+++.+... ..+. .+||+.|++.+++.++..++.+++.+|+|+.
T Consensus 174 ~~~~~g~~i~~~l~~~--l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~ 225 (465)
T TIGR00894 174 SGFQLGTFIFLPISGW--LCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSI 225 (465)
T ss_pred HHHHHHHHHHHHHHHH--HHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCccc
Confidence 9999999998666543 3345 4999999999999888777766777888753
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.67 E-value=2.6e-15 Score=153.80 Aligned_cols=168 Identities=26% Similarity=0.398 Sum_probs=150.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il 89 (560)
.+.++.+...++.....+..|.+.++++. ++.+.+++.+...++..++.++.|+++||+|||+.+.++.++..++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~ 80 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDLGL--SASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLL 80 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHH
Confidence 44566777788888888899999999998 7899999999999999999999999999999999999999999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH
Q 008603 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (560)
Q Consensus 90 ~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i 169 (560)
+.++++++.+++.|++.|++.+...+....++.|++|+++|++.+++.+....+|..+++.+... ..+..+||+.|++
T Consensus 81 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~ 158 (352)
T cd06174 81 LAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGL--LAESLGWRWLFLI 158 (352)
T ss_pred HHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHH--HHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999665543 3445579999999
Q ss_pred HHHHHHHHHHhh
Q 008603 170 LFIPSLIYFVLT 181 (560)
Q Consensus 170 ~ai~~ll~~il~ 181 (560)
.+++.++..++.
T Consensus 159 ~~~~~~~~~~~~ 170 (352)
T cd06174 159 LAILGLLLALLL 170 (352)
T ss_pred HHHHHHHHHHHH
Confidence 988888766553
No 64
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.67 E-value=2.3e-14 Score=153.21 Aligned_cols=178 Identities=17% Similarity=0.182 Sum_probs=140.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH
Q 008603 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS 80 (560)
Q Consensus 1 m~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ 80 (560)
|+|... ...++.++..+.........+.+.++++. ++...+++.+.+.+++.+..++.|+++||+|||++++++.
T Consensus 1 ~~~~f~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~ 75 (393)
T PRK11195 1 MSKGFY---AIMAAQFFSALADNALLFAAIALLKELHY--PDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIAN 75 (393)
T ss_pred CCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHH
Confidence 455443 34455666555444445555566788888 7789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 008603 81 VLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (560)
Q Consensus 81 ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~ 160 (560)
++.+++.+++.++.+. ++.|+++|++.+...+....++.|++|+++|++++++.+....+|..+++.+...+. +.
T Consensus 76 ~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~--~~ 150 (393)
T PRK11195 76 GIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA--DP 150 (393)
T ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH
Confidence 9999888887776664 788999999999999999999999999999999999999999999999966654433 22
Q ss_pred cchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
.|+..+++.+...++. ++..+++||+|.
T Consensus 151 -~~~~~~~i~~~~~~~~-~~~~~~l~~~~~ 178 (393)
T PRK11195 151 -HAEAALAVCALIYLLA-ALFNLFIPRLGA 178 (393)
T ss_pred -HHHHHHHHHHHHHHHH-HHHHhcCCCCcc
Confidence 3777777776655443 334567888753
No 65
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.65 E-value=3.8e-14 Score=151.57 Aligned_cols=173 Identities=14% Similarity=0.103 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~ 91 (560)
.++.++.........+.++.+.+++|. ++.+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.+++.
T Consensus 19 ~l~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~ 96 (402)
T TIGR00897 19 YIGVVVFMTGDGLEQGWLSPFLKALGL--SPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFI 96 (402)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHhCC--CHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444455556688999 889999999999999999999999999999999999999999888876543
Q ss_pred ---h-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHH-HHHHHHHHHHHhccccchhHH
Q 008603 92 ---W-SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGM-FLAYCMVFGMSLMTAPSWRLM 166 (560)
Q Consensus 92 ---~-a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~-~lg~li~~~l~~~~~~~Wr~~ 166 (560)
. .++++.+++.|++.|++.+...+....++.+.+|+++|++++++.+...++|. .+++.+. ....+..+|+..
T Consensus 97 ~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~--~~l~~~~g~~~~ 174 (402)
T TIGR00897 97 VFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYS--SYAIPAFGEMNT 174 (402)
T ss_pred HHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccccchHHH
Confidence 3 35788889999999999988877788889999999999999999999999886 4564433 233344565444
Q ss_pred HHHHHHHHHHHHHhhheeccCC
Q 008603 167 LGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 167 f~i~ai~~ll~~il~~~~lpEs 188 (560)
++......++..++..++.++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~ 196 (402)
T TIGR00897 175 LWSALAFVLTGGVIALFSNKDI 196 (402)
T ss_pred HHHHHHHHHHHHHHHHhccCCC
Confidence 4333333223233333444543
No 66
>PRK10054 putative transporter; Provisional
Probab=99.64 E-value=4.2e-14 Score=151.29 Aligned_cols=180 Identities=13% Similarity=0.146 Sum_probs=148.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH
Q 008603 1 MGGAALVAIAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS 79 (560)
Q Consensus 1 m~~~~li~i~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~ 79 (560)
|||..+.+ .++.++.........+.+| ++.+++|. ++.+.|++.+...++.+++.++.|+++||+|||++++++
T Consensus 5 ~~~~~~~l---~~~~~~~~~g~~~~~~~l~~~l~~~~g~--s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~ 79 (395)
T PRK10054 5 LRRSTSAL---LASSLLLTIGRGATLPFMTIYLSRQYSL--SVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLA 79 (395)
T ss_pred CCchHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHH
Confidence 34554433 3445555566666666554 67788999 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc
Q 008603 80 SVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (560)
Q Consensus 80 ~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~ 159 (560)
.++.+++.+++.++++++.++++|++.|.+.+...+....+.+|.+|+++|++..++.....++|..+++.+...+. .
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~--~ 157 (395)
T PRK10054 80 ITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV--M 157 (395)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H
Confidence 99999999999999999999999999998888888889999999999999999999999999999999976655443 2
Q ss_pred ccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
.+|+..|++.++..++..++..+++|+.
T Consensus 158 -~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 158 -QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred -hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4899999988888777665555556654
No 67
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.64 E-value=3.8e-14 Score=155.82 Aligned_cols=193 Identities=15% Similarity=0.167 Sum_probs=136.5
Q ss_pred HHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhhhhHHHH
Q 008603 24 TIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV---MLWSPNVYVL 99 (560)
Q Consensus 24 ~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il---~~~a~s~~~l 99 (560)
.....+|. +.+.+|. +....+++.+...++.+++.++.|+++||+|||+.++++.++..+..+. ...+++...+
T Consensus 268 ~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (490)
T PRK10642 268 MLLTYMPSYLSHNLHY--SEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLI 345 (490)
T ss_pred HHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 33444554 5567888 6677778888888999999999999999999999988877654433322 2234567778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
++++++.|++.+........++.|++|++.|+++.++......++..+++.+...+. ....+|+..+++..+++++.++
T Consensus 346 ~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~-~~~~~~~~~~~~~~~~~~i~~~ 424 (490)
T PRK10642 346 FAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLV-ESTQNLMMPAYYLMVVAVIGLI 424 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCchHHHHHHHHHHHHHHH
Confidence 889999999888877788889999999999999988743334444444433332221 1223578777777777766555
Q ss_pred hhheeccCChhhhhhh-----cchHHHHHHHHHHhcCcChHHHHHHHH
Q 008603 180 LTIFYLPESPRWLVSK-----GRMLEAKKVLQSLRGREDVAGEMALLV 222 (560)
Q Consensus 180 l~~~~lpEsP~~L~~~-----gr~~ea~~~l~~l~~~~~~~~~i~~l~ 222 (560)
. .+++||+|+|+.++ +|.+|+++.+.+++. +++.++.++.
T Consensus 425 ~-~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~~--~~~~~~~~i~ 469 (490)
T PRK10642 425 T-GVTMKETANRPLKGATPAASDIQEAKEILVEHYD--NIEQKIDDID 469 (490)
T ss_pred H-HHHhccccCCCCCCccccccchhhHHHHhhcccc--cccchhhhcc
Confidence 4 45679999998765 899999999999874 3344444333
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.62 E-value=6.4e-14 Score=150.11 Aligned_cols=172 Identities=17% Similarity=0.216 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~ 90 (560)
.+..++.....+...+.++ ++.+++|. ++.+.|++.+...+...+..++.|+++||+|||+++.++.++.+++.+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 16 LIDNMLVVLGFFVVFPLISIRFVDQLGW--AAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 3455555555555566555 67889999 88999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHH
Q 008603 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (560)
Q Consensus 91 ~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ 170 (560)
.++++++.+++.|++.|++.+...+...+++.|.+|+++|++++++.+...++|..+++.+...+. ..+||+.|++.
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~---~~g~~~~f~~~ 170 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL---QYDFRLVCATG 170 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHH
Confidence 999999999999999999999888888999999999999999999999999999999966554443 45899999998
Q ss_pred HHHHHHHHHhhheeccCC
Q 008603 171 FIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 171 ai~~ll~~il~~~~lpEs 188 (560)
++..++..++..++.||.
T Consensus 171 ~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 171 AVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred HHHHHHHHHHHHHhCCcc
Confidence 888777665555566653
No 69
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.61 E-value=6.3e-14 Score=151.17 Aligned_cols=177 Identities=12% Similarity=0.206 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTI-EGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~-~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
+.+.+|+-.|+.-+ ....+.+.|++.+++|+ ++++ .|.+.++++.++.+..+++|+++||+|.|+++.++.+...+
T Consensus 28 ~~~~lC~fGF~~e~-R~n~s~a~p~L~~elgl--T~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl 104 (511)
T TIGR00806 28 LVLYLCFYGFMAQF-RPGESFITPYLLTVLNF--TEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVC 104 (511)
T ss_pred HHHHHHHHHHHHHh-hchHHHHHHHHHHHcCC--CHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHH
Confidence 34434444444333 56667788999999999 7788 99999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 86 ~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
..+++++++++..+.+.|++.|++.|... ++..+++.++|+++|++++++......+|.++++.+...+ ...+||.
T Consensus 105 ~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll---~s~gWr~ 180 (511)
T TIGR00806 105 VWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL---VTLGWIS 180 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCchh
Confidence 99999999999999999999999999998 9999999999999999999999999999999987666552 2457876
Q ss_pred HHHH--HHHHHHHHHHhhheeccCChh
Q 008603 166 MLGV--LFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 166 ~f~i--~ai~~ll~~il~~~~lpEsP~ 190 (560)
.+.+ ..+.+.+..++..+++|-.++
T Consensus 181 y~~Ln~Isl~s~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 181 YSTLNIISLVFMTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 4422 233333334445667774443
No 70
>PTZ00207 hypothetical protein; Provisional
Probab=99.61 E-value=1.1e-13 Score=154.72 Aligned_cols=197 Identities=14% Similarity=0.112 Sum_probs=146.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
++|+++++..+.....+. ....+...|.+++++|+ +..+.+++.++.. ...+..+++|+++||+|||++++++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g~-~y~fsv~s~~L~~~lgl--s~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTSF-MYAFNLISGAMQARYNL--TQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCc--CHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 344444443333333332 34555677889999999 7789888887633 3445677899999999999999999999
Q ss_pred HHHHHHHHHhh------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 008603 83 YFIGGLVMLWS------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (560)
Q Consensus 83 ~ai~~il~~~a------~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~ 156 (560)
++++.++++++ ++++.+++.|++.|++.+...+.+...+.+++| ++||++.++......+|..+...+.....
T Consensus 101 ~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 101 FCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 689999999999999999998999999999997 78999999999999999875433333322
Q ss_pred hccccchhHHHHHHHHHHHHHHHhhheeccC--ChhhhhhhcchHHHHHHHHH
Q 008603 157 LMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE--SPRWLVSKGRMLEAKKVLQS 207 (560)
Q Consensus 157 ~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpE--sP~~L~~~gr~~ea~~~l~~ 207 (560)
. .+|+..|++.+++.++..++.++++++ .|++..++++.+++.+.+++
T Consensus 180 ~---~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~ 229 (591)
T PTZ00207 180 S---DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRL 229 (591)
T ss_pred H---HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHh
Confidence 2 368888888888888877766666654 44555444444444443333
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.59 E-value=2.8e-14 Score=149.40 Aligned_cols=151 Identities=19% Similarity=0.305 Sum_probs=127.9
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~ 102 (560)
....+.+|.+++++|. +.++.+++.+...++..++.++.|+++||+|||+++.++.++.+++.+++ .+++++.+++.
T Consensus 17 ~~~~~~lp~l~~~~~~--s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~ 93 (355)
T TIGR00896 17 TSVGPLLPQIRSALGM--SFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAG 93 (355)
T ss_pred ccCcccHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHH
Confidence 4557789999999999 88999999999999999999999999999999999999998888888777 77889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIY 177 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~ 177 (560)
|++.|++.+...+..+.++.|.+| ++|++++++.+...++|..+++.+...+......+||+.|.+.+++.++.
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 999999999988888888999886 68999999999999999988866554333222234999988777655443
No 72
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.59 E-value=1.4e-14 Score=164.36 Aligned_cols=179 Identities=17% Similarity=0.207 Sum_probs=150.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
+.++..++..+......+..+..++.+.++|++ +..+.|++.+.+.++++++.++.+++.||+|||+++.++++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~l--ss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~l 110 (633)
T TIGR00805 33 VFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKL--STSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGL 110 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCC--CCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHH
Confidence 344555667777777788888899999999999 779999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhh---------------------------------------------------hHHHHHHHHHHHHHHHHHHH
Q 008603 86 GGLVMLWSP---------------------------------------------------NVYVLLLARLLDGFGIGLAV 114 (560)
Q Consensus 86 ~~il~~~a~---------------------------------------------------s~~~lii~R~l~G~g~G~~~ 114 (560)
+.+++++.+ .+..++++|+++|++.+...
T Consensus 111 g~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~ 190 (633)
T TIGR00805 111 GSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIF 190 (633)
T ss_pred HHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcch
Confidence 999988753 25677899999999999999
Q ss_pred HHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc--cc------------------cchhHHHHHHHHHH
Q 008603 115 TLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--TA------------------PSWRLMLGVLFIPS 174 (560)
Q Consensus 115 ~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~--~~------------------~~Wr~~f~i~ai~~ 174 (560)
+....|+.|++|+++|++..++.+....+|..+++++...+... +. .+|+..|++.+++.
T Consensus 191 ~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~ 270 (633)
T TIGR00805 191 PLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVA 270 (633)
T ss_pred hcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999997766544321 10 13788898888888
Q ss_pred HHHHHhhheeccC
Q 008603 175 LIYFVLTIFYLPE 187 (560)
Q Consensus 175 ll~~il~~~~lpE 187 (560)
++..+.. +++|+
T Consensus 271 ~l~~v~l-~~~p~ 282 (633)
T TIGR00805 271 LLTSIPF-FFFPK 282 (633)
T ss_pred HHHHHHH-HhCcc
Confidence 8866554 44444
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.58 E-value=9.5e-14 Score=166.90 Aligned_cols=169 Identities=11% Similarity=0.070 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---hhhhHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML---WSPNVYVL 99 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~---~a~s~~~l 99 (560)
.....+.+.+..+++.+.+....+++.+++.++.+++++++|+++||+|||++++++.++.+++.+++. ++++++.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 106 (1146)
T PRK08633 27 GHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLA 106 (1146)
T ss_pred HHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 344445666777788755567789999999999999999999999999999999998877666555444 35789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc-------ccchhHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-------APSWRLMLGVLFI 172 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~-------~~~Wr~~f~i~ai 172 (560)
+++|++.|++.+...++...+++|++|+++|++++++.+....+|.++++.+...+.... ..+|++.+.+..+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 186 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLL 186 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977665443320 1245555544444
Q ss_pred HHHHHHHhhheeccCChhh
Q 008603 173 PSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 173 ~~ll~~il~~~~lpEsP~~ 191 (560)
..++..++..+++||+|..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~ 205 (1146)
T PRK08633 187 AVAVLGLIFAYRLPKVPAA 205 (1146)
T ss_pred HHHHHHHHHHhcCcCCCCC
Confidence 4444444445667887654
No 74
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.58 E-value=1.4e-13 Score=147.49 Aligned_cols=173 Identities=17% Similarity=0.145 Sum_probs=140.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 008603 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~ 92 (560)
++.++..+........+|.+.++++. ++.+.|++.+...++.++++++.|+++||+|||+++.++.++.+++.+.+++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~--s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~ 101 (417)
T PRK10489 24 IARFISIFGLGLLGVAVPVQIQMMTG--STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLAL 101 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHH
Confidence 34555556666777788988889988 7899999999999999999999999999999999998888777766655432
Q ss_pred -----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHH
Q 008603 93 -----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (560)
Q Consensus 93 -----a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f 167 (560)
.++++.+++.|++.|++.+...+....++.|++|+++|++++++.+....+|..+++.+... ..+..+|++.|
T Consensus 102 ~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~--l~~~~~~~~~~ 179 (417)
T PRK10489 102 NAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGL--LIAAGGVAWNY 179 (417)
T ss_pred HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHH--HHHHHhhHHHH
Confidence 56788999999999999998888889999999999999999999999999999998665533 33445799999
Q ss_pred HHHHHHHHHHHHhhheeccCChh
Q 008603 168 GVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 168 ~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
++.++..++..++ .+.+|++|+
T Consensus 180 ~~~~~~~~~~~~~-~~~l~~~~~ 201 (417)
T PRK10489 180 GLAAAGTFITLLP-LLRLPALPP 201 (417)
T ss_pred HHHHHHHHHHHHH-HHhCCCCCC
Confidence 8877776665443 456677643
No 75
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.58 E-value=1.5e-13 Score=146.43 Aligned_cols=177 Identities=19% Similarity=0.232 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHH-HHHHHHHHHHHHHHHhhhCChHHH-HHHHHHHH
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMS-LIGATCITTCSGAIADWLGRRPML-IVSSVLYF 84 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~-~lG~iig~~~~G~LsDr~GRR~~l-li~~ll~a 84 (560)
.....+..++.+.......+.+| ++++++|+ ++++.|++.++. .++.+++.+++++ +||+|||+.+ +.+.++.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~--s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHA--RPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHH
Confidence 33445556777777776777666 57889999 779999997665 4566666766666 9999998865 45566666
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcch--hhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIR--GLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 85 i~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~R--G~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
++.++++++++++.+++.+.+.+...+...+....++.+..+++.| +..+++.+...++|..+++.+. ....+..+
T Consensus 94 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~--~~l~~~~g 171 (393)
T PRK15011 94 LACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLA--YALAMGFS 171 (393)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHH--HHHHHhcC
Confidence 7777788889998877666555555556667788888888776655 4456788888899999995544 44445679
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
||..|++.++..++..++.++++||.|
T Consensus 172 w~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 172 FTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 999999999888887777777788875
No 76
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.57 E-value=1e-13 Score=152.20 Aligned_cols=184 Identities=17% Similarity=0.173 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGA-VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~-lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
+.++..+++.++....+...++.. +.-+.+|.++ ...+.+.+.++++++++++.++++.+.||+.-.+.+....+..
T Consensus 44 l~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~--~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w 121 (495)
T KOG2533|consen 44 LFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKL--VGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILW 121 (495)
T ss_pred HHHHHHHHHHHHHHhcchhcchhHHHcCCccccch--hhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHH
Confidence 344445666667777777665543 3346688888 7799999999999999999999999999999899999999998
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh----cc
Q 008603 84 FIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----MT 159 (560)
Q Consensus 84 ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~----~~ 159 (560)
.+..++..+..|++.+++.|++.|+..+..+|.+..++..++.+++|++.++++.....+|.+++.++..++.. ..
T Consensus 122 ~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~ 201 (495)
T KOG2533|consen 122 GLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGG 201 (495)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCC
Confidence 88888888899999999999999999999999999999999999999999999999999999999998888653 34
Q ss_pred ccchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
..+||++|.+.++++++..+++++++|+.|.
T Consensus 202 ~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 202 LAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred cCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 5699999999999999999999999999996
No 77
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.57 E-value=7.7e-14 Score=152.14 Aligned_cols=177 Identities=18% Similarity=0.116 Sum_probs=142.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
+.++..+.++...........+..+|.+.+++|. +..+.+++.+.+.++..++.++.|+++||+|||++++++.++.+
T Consensus 18 w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~g~--s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~ 95 (455)
T TIGR00892 18 WVVLGATFVSIGFSYAFPKAVTVFFKELQQIFQA--TYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLAS 95 (455)
T ss_pred hHHHHHHHHHHHHHHhhhcchhhhHHHHHHHhCc--chhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHH
Confidence 4444455555444444445567778999999999 77999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 85 IGGLVMLWSPNVYVLLL-ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 85 i~~il~~~a~s~~~lii-~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
++.++++++++++.+++ .|++.|++.+...+....++.+++| ++|++++++.+....+|..+++.+. ....+..+|
T Consensus 96 ~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~--~~l~~~~gw 172 (455)
T TIGR00892 96 LGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLN--QYLFESFGW 172 (455)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHH--HHHHHHhCh
Confidence 99999999999988765 5799999999876777788889996 7899999999999999988885544 333455689
Q ss_pred hHHHHHHHHHHHHHHHhhheecc
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLP 186 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lp 186 (560)
|+.|++.+++.++..+..+++.+
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~~~ 195 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALMRP 195 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999888766554444443
No 78
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.57 E-value=2.3e-13 Score=142.32 Aligned_cols=161 Identities=16% Similarity=0.154 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChHH-HHHHHHHHHHHHHHHHhh---
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRPM-LIVSSVLYFIGGLVMLWS--- 93 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-----GRR~~-lli~~ll~ai~~il~~~a--- 93 (560)
...++.+|.+.+++|+ +.++.|++... .+...+ .++.|+++||+ |||+. ++.+.++.++..+++++.
T Consensus 5 ~~~~~~~~~~~~~~g~--s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 5 GLVGNTLPYWLRSKNV--SLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred hhHHhHHHHHHHHcCC--CHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 4456788999999999 77999999655 444444 89999999998 89886 566777777776677776
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc--------hhH
Q 008603 94 PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS--------WRL 165 (560)
Q Consensus 94 ~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~--------Wr~ 165 (560)
.+.+.+.+..++.+++.+...+....++.|++|+++|++++++.....++|..+++.+...+ ....+ ||.
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l--~~~~g~~~~~~~~wr~ 158 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL--ASPEFANTGLITLWGY 158 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH--hhhcccccccccccHH
Confidence 45666777778888888888899999999999999999999999999999999886555333 33334 999
Q ss_pred HHHHHHHHHHHHHHhhheeccCCh
Q 008603 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 166 ~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
.|++.+++.++..++.++..||++
T Consensus 159 ~f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 159 IFFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCC
Confidence 999999888776655555567753
No 79
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.55 E-value=7.5e-13 Score=145.92 Aligned_cols=174 Identities=14% Similarity=0.147 Sum_probs=137.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChHH-HHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRPM-LIVSSVLY 83 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-----GRR~~-lli~~ll~ 83 (560)
.+.+..+.++......++.+|.+.++.|. +..+.+.. +...... +..++.|+++||+ |||+. ++++.++.
T Consensus 16 ~~~~l~~~~gl~~~~~~~~l~~~l~~~g~--~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~ 91 (491)
T PRK11010 16 ILLILGFASGLPLALTSGTLQAWMTVENI--DLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLL 91 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHH
Confidence 44455567777778888899999999998 77888886 3333333 6889999999999 99875 66777777
Q ss_pred HHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc-
Q 008603 84 FIGGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT- 159 (560)
Q Consensus 84 ai~~il~~~a---~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~- 159 (560)
+++.+++++. .+++.+.+.+++.+++.+...+....++.|++|+++|++++++......+|..+++.+.. ...+
T Consensus 92 ~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~--~l~~~ 169 (491)
T PRK11010 92 LVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLAL--WLADR 169 (491)
T ss_pred HHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHhc
Confidence 7777777664 468889999999999999999999999999999999999999999999999999855443 3334
Q ss_pred ccchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
..+||..|++.+++.++..+.. ++.||+|+
T Consensus 170 ~~GWr~~f~i~a~l~ll~~l~~-~~~~e~~~ 199 (491)
T PRK11010 170 YLGWQGMYWLMAALLIPCIIAT-LLAPEPTD 199 (491)
T ss_pred ccCHHHHHHHHHHHHHHHHHHH-HhcCCCcc
Confidence 4699999999998877765543 34788753
No 80
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.51 E-value=2.7e-12 Score=137.16 Aligned_cols=172 Identities=15% Similarity=0.117 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----CChH-HHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-----GRRP-MLIVSSVLYFI 85 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-----GRR~-~lli~~ll~ai 85 (560)
..-++.+++........+|.+.++.|. +.++.|++..+... .+..+++|+++||+ |||+ .++++.++.++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~g~--~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l 80 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVEGL--DIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAA 80 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHH
Confidence 345667788788888889988888999 88999999777765 68899999999999 8775 78888888888
Q ss_pred HHHHHHhh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 008603 86 GGLVMLWS---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-AP 161 (560)
Q Consensus 86 ~~il~~~a---~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~-~~ 161 (560)
+..++.+. .+++.+++..++.++..+...+....++.|++|+++|++++++......+|..++..+.. ...+ ..
T Consensus 81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~--~l~~~~~ 158 (402)
T PRK11902 81 SIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLAL--WLADRVL 158 (402)
T ss_pred HHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHH--HHHhccc
Confidence 88777776 357777888888888888888999999999999999999999999988999988855443 3333 35
Q ss_pred chhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 162 SWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 162 ~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
+||..|++.++..++..+. .++.||+++
T Consensus 159 gw~~~f~i~a~~~l~~~l~-~~~~~e~~~ 186 (402)
T PRK11902 159 GWGNTYLLMAGLMLAGALT-TLWAPEPEV 186 (402)
T ss_pred CHHHHHHHHHHHHHHHHHH-HHhcCCCcc
Confidence 9999999988887765543 456777654
No 81
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.50 E-value=7.9e-13 Score=147.27 Aligned_cols=161 Identities=21% Similarity=0.312 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHH
Q 008603 18 QGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVY 97 (560)
Q Consensus 18 ~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~ 97 (560)
..+.....+..++++..++|- .....|+.++..++..++.++.|.++|.||||++++++.++..++.++++.++|..
T Consensus 56 ~~~~~~~~a~~l~~I~~diG~---~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~ 132 (599)
T PF06609_consen 56 AYFVLVLPASILPYINADIGG---SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMN 132 (599)
T ss_pred HHHHHhccHHHHHHHHHhcCC---CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHH
Confidence 334444456678899999985 35677888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 008603 98 VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIY 177 (560)
Q Consensus 98 ~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~ 177 (560)
.++.+-.+.|++.|... .....++|+.|.|.|+....+..........+++... -......+|||.|++..+...+.
T Consensus 133 ~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia--~~~~~~~~WRw~~~~~~i~~~i~ 209 (599)
T PF06609_consen 133 TFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIA--QLFAAHSGWRWIFYIFIIWSGIA 209 (599)
T ss_pred HHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHH--HHhccCCCcchHHHHHHHHHHHH
Confidence 99999999999988775 4566799999999998777665544433333332222 22334569999999999988877
Q ss_pred HHhhhee
Q 008603 178 FVLTIFY 184 (560)
Q Consensus 178 ~il~~~~ 184 (560)
+++.+++
T Consensus 210 ~vl~~~f 216 (599)
T PF06609_consen 210 LVLIFFF 216 (599)
T ss_pred HHHHHHH
Confidence 6654433
No 82
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.50 E-value=1.8e-12 Score=137.66 Aligned_cols=160 Identities=11% Similarity=0.003 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHH-HHHHHHH-H
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSS-VLYFIGG-L 88 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~-ll~ai~~-i 88 (560)
+.+.++...+......|.+|.+.+++|. +..+.|++.+++.+...+++++.|+++||+|||....... +..++.. .
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~g~--s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~ 86 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGIGL--GEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA 86 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 5566777777778889999999999999 8899999999999999999999999999999864332221 1111222 2
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
...++++++.+++.|++.|.+.+...+....+..+. .++|++..+....+.++|..+++.+. ....+..+||..|+
T Consensus 87 ~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~--g~l~~~~g~~~~f~ 162 (382)
T TIGR00902 87 FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALF--GGLIGMFDEQNILA 162 (382)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHH--HHHHHHcChhHHHH
Confidence 334678899999999999998888878888887664 57789999999999999999995544 44456679999998
Q ss_pred HHHHHHHH
Q 008603 169 VLFIPSLI 176 (560)
Q Consensus 169 i~ai~~ll 176 (560)
+.++..++
T Consensus 163 ~~~~~~~~ 170 (382)
T TIGR00902 163 ILTAGLAF 170 (382)
T ss_pred HHHHHHHH
Confidence 87665333
No 83
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.48 E-value=5.3e-12 Score=134.40 Aligned_cols=173 Identities=16% Similarity=0.129 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
.+...+++.........+.+| ++.+++|+ ++.+.|++.++..++..+++++.|+++||+|||+.++.+.+..+++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~ 83 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVNGL--SKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFA 83 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 344455566666666777766 45677999 889999999999999999999999999999999999887666654433
Q ss_pred HH---Hhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 008603 89 VM---LWS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (560)
Q Consensus 89 l~---~~a-----~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~ 160 (560)
.. .+. ..+..+++.|++.|++.+...+....+..+..+. ++...+....+.++|..+++.+... .. .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~g~~~g~~~~g~--l~-~ 158 (396)
T TIGR00882 84 PFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSRN--SNFEYGKARMFGCVGWALCASIAGI--LF-S 158 (396)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhhh--cccccchhhhhcccHHHHHHHHHhh--hh-c
Confidence 22 122 1234556778888888888878887787776433 3455667777778888888665432 22 3
Q ss_pred cchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
.+||..|++.+++.++..++.++..||.|
T Consensus 159 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (396)
T TIGR00882 159 IDPQIVFWLGSGFALILMLLLMFAKPKAP 187 (396)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 48999999998888887666555556654
No 84
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.48 E-value=5.7e-13 Score=118.14 Aligned_cols=137 Identities=31% Similarity=0.468 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q 008603 50 AMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI 129 (560)
Q Consensus 50 s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~ 129 (560)
+...++.+++.++.|++.||+|||+.+.++.++.+++.+++.++++++.+++.+++.|++.+...+....++.|.+|+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 45567889999999999999999999999999999998888888999999999999999999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 130 RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 130 RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
|++.+++.+....+|..+++.+.. ...+..+|++.|++.+++.++..++..++.||+
T Consensus 85 ~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 85 RGVALGLMSAGIALGPLLGPPLGG--VLAQFLGWRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred hhHHHHHHHHhHHHHHHHhHHhHH--HHhcccchHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999865553 334567899999998888888777766666663
No 85
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.47 E-value=1e-12 Score=143.54 Aligned_cols=153 Identities=24% Similarity=0.397 Sum_probs=136.1
Q ss_pred HcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHH
Q 008603 35 EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLARLLDGFGIGL 112 (560)
Q Consensus 35 ~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~--s~~~lii~R~l~G~g~G~ 112 (560)
+++. ++.+.+++.++++.|++++.++.|+++||+|-|+++.++.++.+++++++.++- +++.+++.|+++|++.|.
T Consensus 67 ~~~w--s~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 67 EYDW--SSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred eecC--CHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 4556 779999999999999999999999999999999999999999999999998765 456789999999999999
Q ss_pred HHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc-cchhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 113 AVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-PSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 113 ~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~-~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
..++...+.+.++|+++|++..++......+|.+++ +.....+.+. .||+..|++.++.+++.+++.+++..|+|..
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~--mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~ 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIIT--MPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHH--HHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 999999999999999999999999999999999888 3333344444 8999999999999999988877888888853
No 86
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.47 E-value=1.3e-12 Score=143.98 Aligned_cols=157 Identities=11% Similarity=0.104 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIA-GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~-~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr-~GRR~~lli~~ll~ai~~il 89 (560)
++..+...+...... .+..++++++|+ +.++.+++.+.+.+...+..+++|+++|| +|||++++++.++++++.++
T Consensus 20 ~~~~~~er~~~y~~~~~l~~yl~~~lg~--~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~ 97 (489)
T PRK10207 20 FFVELWERFGYYGVQGILAVFFVKQLGF--SQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFM 97 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHH
Confidence 333344444444333 455678889999 77888999999988888888999999999 99999999999999999999
Q ss_pred HHhhhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc--chhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Q 008603 90 MLWSPNVY-VLLLARLLDGFGIGLAVTLVPIYISETAPPE--IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (560)
Q Consensus 90 ~~~a~s~~-~lii~R~l~G~g~G~~~~~~~~~isE~~p~~--~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~ 166 (560)
++++++.. .++++|+++|++.|...+....+++|.+|++ +|+...+++....++|..+++.+. ..+.+..+||+.
T Consensus 98 ~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~--g~l~~~~gw~~~ 175 (489)
T PRK10207 98 TGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA--PVIADKFGYSVT 175 (489)
T ss_pred HHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH--HHHHHhhChHHH
Confidence 99887644 4558999999999999889999999999987 457789999999999999985554 444556699999
Q ss_pred HHHHHH
Q 008603 167 LGVLFI 172 (560)
Q Consensus 167 f~i~ai 172 (560)
|++.++
T Consensus 176 F~i~~i 181 (489)
T PRK10207 176 YNLCGA 181 (489)
T ss_pred HHHHHH
Confidence 998755
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.47 E-value=2e-12 Score=142.08 Aligned_cols=164 Identities=10% Similarity=0.076 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHH--cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLY-IKRE--FHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFI 85 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~-i~~~--~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr-~GRR~~lli~~ll~ai 85 (560)
.+.+..+...+......+.+|. +.++ +|+ +..+.+++.+.+.++..++.+++|+++|| +|||++++++.++.++
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~--s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~ 91 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGLGF--SQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLML 91 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHH
Confidence 3444555555655656666664 4555 888 78999999999999999999999999999 8999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc---hhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 86 GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI---RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 86 ~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~---RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
+.++++++++++.++++|++.|++.|...+....++++.+|++. |+.+.++.+...++|..+++.+.. ...+..+
T Consensus 92 g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g--~l~~~~g 169 (475)
T TIGR00924 92 GHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAG--VIAENYG 169 (475)
T ss_pred HHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHH--HHHHhcC
Confidence 99999998888899999999999999988999999999998764 888999999999999999966553 4445568
Q ss_pred hhHHHHHHHHHHHHH
Q 008603 163 WRLMLGVLFIPSLIY 177 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~ 177 (560)
|++.|++.++..++.
T Consensus 170 ~~~~f~~~~~~~~~~ 184 (475)
T TIGR00924 170 YHVGFNLAAVGMVIG 184 (475)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999999888655543
No 88
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.44 E-value=5.7e-12 Score=133.73 Aligned_cols=166 Identities=11% Similarity=0.023 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh----HHHHHHHHHHHHHHHH
Q 008603 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR----PMLIVSSVLYFIGGLV 89 (560)
Q Consensus 14 ~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR----~~lli~~ll~ai~~il 89 (560)
.++..........|.+|.+.+++|. +..+.|++.+++.++.+++.++.|+++||+||| +.+.+..++. ....
T Consensus 12 ~~~~~~~~~g~~~p~l~~~l~~~g~--s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 12 SYFGYFFAYGVFLPFWSVWLKGQGY--TPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCC--CHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 3555566678888889988899999 889999999999999999999999999999994 3332222221 2223
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH
Q 008603 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (560)
Q Consensus 90 ~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i 169 (560)
...+++++.+++.|++.|++.+...+....++.++ .++|++..+....+.++|..+++.+. ..+.+..+||..|++
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lg--g~l~~~~g~~~~f~~ 163 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALT--GKLVSWFGEQAILWI 163 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHH--HHHHHHcChhHHHHH
Confidence 33467899999999999999888888887777776 45688888889999999999995544 445566799999988
Q ss_pred HHHHHHHHHHhhheeccCC
Q 008603 170 LFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 170 ~ai~~ll~~il~~~~lpEs 188 (560)
.++..++..++ .++.||.
T Consensus 164 ~~~~~~~~~~~-~~~~~~~ 181 (382)
T PRK11128 164 LTAGVASMLLG-QLLRPTI 181 (382)
T ss_pred HHHHHHHHHHH-HHccCCC
Confidence 77665554433 3445654
No 89
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.42 E-value=1.4e-11 Score=148.55 Aligned_cols=144 Identities=12% Similarity=0.096 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 43 TIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIV---SSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPI 119 (560)
Q Consensus 43 ~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli---~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~ 119 (560)
...+++.+++.+.+++.++++|.++||+|||+++.. +.++.++..+...+.++++.++++|+++|++.+.+.++...
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 567888899999999999999999999999997543 22222222222334589999999999999999999999999
Q ss_pred HHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 120 YISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 120 ~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
++.+++|+++|++++++.++..++|.++++.+.. .+....+|++.|.+..+..++ .++..+++|+++
T Consensus 132 ~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g--~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (1140)
T PRK06814 132 ILPDHLNKDELLGANALVEAGTFIAILLGTIIGG--LATISGNFVILVALLMGIAVL-GWLASLFIPKTG 198 (1140)
T ss_pred hhHhhcCccccchhhHHHHHHHHHHHHHHHHHHH--HHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCC
Confidence 9999999999999999999999999999966554 444566899998555454444 344455666653
No 90
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.41 E-value=2.6e-12 Score=137.88 Aligned_cols=161 Identities=17% Similarity=0.263 Sum_probs=128.8
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCC-hHHHHHHHHHHHHHHHHHHhhhh------
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLYFIGGLVMLWSPN------ 95 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr----~GR-R~~lli~~ll~ai~~il~~~a~s------ 95 (560)
.+.+++.+++|+ ++.+.|++.++..+...+..|+.|.++|| +|| |+.++++.++.+++.+++.+.++
T Consensus 21 ~l~~~~~~~~g~--s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~ 98 (437)
T TIGR00792 21 YLLFFYTDVLGL--SAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGK 98 (437)
T ss_pred HHHHHHHHccCC--CHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchH
Confidence 356678888999 88999999999999999999999999997 687 46788888888888887776653
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHHHH
Q 008603 96 VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-----MTAPSWRLMLGV 169 (560)
Q Consensus 96 ~~~lii~R~l~G~g~G~~~~~~~~~isE~~-p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~-----~~~~~Wr~~f~i 169 (560)
+..+++.+++.+++.+...+...++.+|+. ++++|++.+++.+.+..+|..++..+...+.. .+..+||+++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i 178 (437)
T TIGR00792 99 LVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALV 178 (437)
T ss_pred HHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHH
Confidence 456677788888888887777788889987 46889999999998888887766544332221 134589999999
Q ss_pred HHHHHHHHHHhhheeccCCh
Q 008603 170 LFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 170 ~ai~~ll~~il~~~~lpEsP 189 (560)
.+++.++..++.+++.||.+
T Consensus 179 ~~~l~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 179 LALIGVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHHHHHcCCEecC
Confidence 99998888777777888875
No 91
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.40 E-value=3.5e-11 Score=138.20 Aligned_cols=139 Identities=14% Similarity=0.023 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008603 46 GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA 125 (560)
Q Consensus 46 gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~ 125 (560)
.+...+..++.+++.++.|+++||+|||++++++.++.+++.++++++++...+++++++.|++.+...+....+++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44456667889999999999999999999999999999999999999888888888899999988888899999999999
Q ss_pred CCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 126 PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 126 p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
|++.|++++++.+.+..+|.++++.+...+... .....|++.+++.++..++. +++||+
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~---~~~~pf~i~a~~lll~~ll~-~~LPET 736 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI---TKAAPILFASAALACGGLLA-LKLPDT 736 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 999999999999999999999997665433321 34567777777777655554 456987
No 92
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.38 E-value=6.1e-11 Score=127.39 Aligned_cols=170 Identities=16% Similarity=0.133 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~ 91 (560)
+.+++.........+.+| ++.+++|+ ++.+.|++.+++.++.++++++.|+++||+|||+.++++..+.++......
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~l~~~~g~--s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 94 (420)
T PRK09528 17 LFFFFFFFIWSSWFSFFPIWLHDINGL--SGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFF 94 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 445555555555566655 56667999 889999999999999999999999999999999998886665554432211
Q ss_pred ---hhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 92 ---WSP-----NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 92 ---~a~-----s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
.++ .+...++++++.|.+.....+....+..+. .+.+++..+....+.++|..+++.+...+. + .+|
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~--~-~~~ 169 (420)
T PRK09528 95 IYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERV--SRRSGFEYGRARMWGSLGWALCAFIAGILF--N-INP 169 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHH--HhhccccchhhHHhhhHHHHHHHHHHHHHH--h-cCc
Confidence 111 111122233333333333333333333222 245677788888888899988866654332 2 389
Q ss_pred hHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
+..|++.+++.++..++.++..+|.|
T Consensus 170 ~~~f~~~~~~~~~~~~~~~~~~~~~~ 195 (420)
T PRK09528 170 QINFWLGSGSALILLVLLFFAKPDAP 195 (420)
T ss_pred hHhHHHHHHHHHHHHHHHhccccccc
Confidence 99999988888777666555555543
No 93
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.36 E-value=5.5e-11 Score=124.97 Aligned_cols=233 Identities=20% Similarity=0.166 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
.+..+.++..+|+.++.+.....++|.+++.|++ +..+.+++..+++.|+.++.++.|.+.+|+|+|+.++.++.+++
T Consensus 12 ~~~~v~~t~lFfl~G~~~~l~diLip~l~~~f~l--s~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~a 89 (422)
T COG0738 12 KLAFVLLTSLFFLWGFITCLNDILIPHLKEVFDL--TYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYA 89 (422)
T ss_pred eeHHHHHHHHHHHHHHHhhcchhhHHHHHHHhCc--cHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHH
Confidence 3445566667788889888889999999999999 88999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc---
Q 008603 85 IGGLVML---WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--- 158 (560)
Q Consensus 85 i~~il~~---~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~--- 158 (560)
+++++.. -..++..++.+-|+.|.|.+...+...+|++.+.+++.-...+++.|..+.+|..+++++.-.+...
T Consensus 90 vg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~ 169 (422)
T COG0738 90 VGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA 169 (422)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 9999885 4568899999999999999999999999999999999889999999999999999997776655441
Q ss_pred --------------cccchhHHHHHHHHHHHHHHHhhhe-eccCChhhhhhhcchHHHHHHHHHHhcCcChHHHHHHHHH
Q 008603 159 --------------TAPSWRLMLGVLFIPSLIYFVLTIF-YLPESPRWLVSKGRMLEAKKVLQSLRGREDVAGEMALLVE 223 (560)
Q Consensus 159 --------------~~~~Wr~~f~i~ai~~ll~~il~~~-~lpEsP~~L~~~gr~~ea~~~l~~l~~~~~~~~~i~~l~~ 223 (560)
....|+..|...+...++..+.... -.|+.+.-..++.+...+ .. .+..++....+..+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~--~~--~~l~~~~~~~~gvl~~ 245 (422)
T COG0738 170 LTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSA--GL--SSLFQNKHLRLGVLAI 245 (422)
T ss_pred hccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccc--hH--HHHHhChHHHHHHHHH
Confidence 1224777777777666665544322 235443211111111111 11 1112233344556666
Q ss_pred HHHhhhhhhHHHHHhccccc
Q 008603 224 GLGVGGETSLEEYIIGPAND 243 (560)
Q Consensus 224 ~l~~g~~~t~~~~i~~~~~~ 243 (560)
.+..|.|.++.+++..+..+
T Consensus 246 FlYVG~Eva~gsfl~~y~~~ 265 (422)
T COG0738 246 FLYVGAEVAIGSFLVSYLEE 265 (422)
T ss_pred HHHHhHHHHHHHHHHHHHHh
Confidence 66778888888776554444
No 94
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.36 E-value=5.2e-12 Score=131.34 Aligned_cols=114 Identities=21% Similarity=0.201 Sum_probs=104.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~ 120 (560)
+....|.+.+++.++.++.++..|.++||+|||++++++++..+++..+.+.+.|+..+++.|++.|+..|.. .++.++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl-~v~rAi 144 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL-SVIRAI 144 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch-HHHHHH
Confidence 5577899999999999999999999999999999999999999999999999999988888899999999977 778899
Q ss_pred HHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 121 ISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 121 isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
++|++++|.|++.++..+..+.+|.++||.++..+
T Consensus 145 isdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl 179 (451)
T KOG2615|consen 145 ISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL 179 (451)
T ss_pred HHhhcChhhccceeeeeehhhhcchhhcchhhhHH
Confidence 99999999999999999999999999995555443
No 95
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.34 E-value=1.4e-10 Score=118.83 Aligned_cols=163 Identities=26% Similarity=0.367 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH-HHHHHHHHHHHHHHHHHh
Q 008603 15 NLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRP-MLIVSSVLYFIGGLVMLW 92 (560)
Q Consensus 15 ~fl~g~~~~~~~~~lp~i~~~-~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~-~lli~~ll~ai~~il~~~ 92 (560)
.+.............|.+.++ ++. +..+.+++.+...++.+++.++.+++.||+|||+ .+.++.++..++.+++.+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 261 (352)
T cd06174 184 FFLLSFGYYGLLTYLPLYLQEVLGL--SAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLAL 261 (352)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 334444445555556655555 488 7799999999999999999999999999999999 999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Q 008603 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (560)
Q Consensus 93 a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai 172 (560)
.++.+.+++..++.|++.+...+....++.|..|+++|++.+++.+...++|..+++.+. ....+..+|+..|.+.++
T Consensus 262 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~--g~l~~~~~~~~~~~~~~~ 339 (352)
T cd06174 262 APSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLA--GLLLDTGGYGGVFLILAA 339 (352)
T ss_pred hccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhcccCcchHHHHHHH
Confidence 888999999999999999999999999999999999999999999999999999985554 444456789999999999
Q ss_pred HHHHHHHhh
Q 008603 173 PSLIYFVLT 181 (560)
Q Consensus 173 ~~ll~~il~ 181 (560)
+.++..++.
T Consensus 340 ~~~i~~i~~ 348 (352)
T cd06174 340 LALLAALLL 348 (352)
T ss_pred HHHHHHHHh
Confidence 988876653
No 96
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.33 E-value=8.3e-11 Score=130.11 Aligned_cols=162 Identities=14% Similarity=0.173 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~-~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr-~GRR~~lli~~ll~ai~~il 89 (560)
++..+...+....... ..+++.+++|+ +.++.+++.+.+........+++|+++|| +|||++++++.++.+++.++
T Consensus 27 ~~~~~~~~~~~y~~~~~l~~yl~~~lg~--s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l 104 (500)
T PRK09584 27 FSIELWERFGYYGLQGIMAVYLVKQLGM--SEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYAL 104 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 3333444444434444 44567789999 67888888877766666666799999999 59999999999999999888
Q ss_pred HHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc--hhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Q 008603 90 MLWSP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI--RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (560)
Q Consensus 90 ~~~a~-s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~--RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~ 166 (560)
+++++ +...+.++|+++|++.|...+....+++|.+|++. |..+.++.+...++|..+++.+.. ...+..+||+.
T Consensus 105 ~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g--~l~~~~g~~~~ 182 (500)
T PRK09584 105 VAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATP--WLAAKYGWSVA 182 (500)
T ss_pred HHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHH--HHHHhhCHHHH
Confidence 88864 56677788999999999988888899999998654 445788888999999999966553 44456799999
Q ss_pred HHHHHHHHHHH
Q 008603 167 LGVLFIPSLIY 177 (560)
Q Consensus 167 f~i~ai~~ll~ 177 (560)
|++.++..++.
T Consensus 183 F~i~~i~~~i~ 193 (500)
T PRK09584 183 FALSVVGMLIT 193 (500)
T ss_pred HHHHHHHHHHH
Confidence 99987654443
No 97
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.33 E-value=8.2e-11 Score=127.04 Aligned_cols=162 Identities=15% Similarity=0.132 Sum_probs=129.6
Q ss_pred HHHHHHHHHcCCCC------ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh----hH
Q 008603 27 GAVLYIKREFHLET------EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP----NV 96 (560)
Q Consensus 27 ~~lp~i~~~~gls~------s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~----s~ 96 (560)
...+.+.++.+.+. .....+.+.++..++.+++.++.|+++||+|||+++.++.++.+++.+++.... ++
T Consensus 229 ~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~ 308 (418)
T TIGR00889 229 IFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGY 308 (418)
T ss_pred HhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhH
Confidence 33444455555421 236678999999999999999999999999999999999999888876666532 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHH-HHHHHHHHHHHHHHHHHHhcc-c---cchhHHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMT-A---PSWRLMLGVLF 171 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~-~~~~lG~~lg~li~~~l~~~~-~---~~Wr~~f~i~a 171 (560)
+.+++.+++.|++.+...+....+++|.+|++.|++..++.+ ....+|..+++.+...+.... . .+|+.+|.+.+
T Consensus 309 ~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 309 ALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHH
Confidence 667788999999999888888999999999999999999997 567889988876664443221 1 47999999999
Q ss_pred HHHHHHHHhhheeccCC
Q 008603 172 IPSLIYFVLTIFYLPES 188 (560)
Q Consensus 172 i~~ll~~il~~~~lpEs 188 (560)
++.++..++.++++||+
T Consensus 389 ~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHHHhCCc
Confidence 99999888888888887
No 98
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.32 E-value=9.6e-11 Score=126.51 Aligned_cols=168 Identities=14% Similarity=0.027 Sum_probs=116.8
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIA-GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR-RPMLIVSSVLYFIGGL 88 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~-~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GR-R~~lli~~ll~ai~~i 88 (560)
+++.+|+.+....... ++.+++.+++|+ +..+.|++.+++.++.++++++.|.++||+|| |+++.++.++..++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~--s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHF--SGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 4555666666666664 455678888999 88999999999999999999999999999965 7788888888888888
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----H----hhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYI----S----ETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~i----s----E~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~ 160 (560)
+..+.++++.+.+.|++.|++.+...+....+. . |......|.+..+ .+|..+++++.... ...
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l--~~~ 156 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLL--DIE 156 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHh--ccc
Confidence 888888999999999999998766655544432 2 2222233444333 35666664444322 223
Q ss_pred cchhHHHHHHHHHHHHHHHhhheeccCChh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
..|+ .|++.++..++.+++ .+++||+|+
T Consensus 157 ~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~ 184 (418)
T TIGR00889 157 LSNI-QLYITAGSSALLGVF-ALTLPDIPV 184 (418)
T ss_pred chhH-HHHHHHHHHHHHHHH-HhcCCCCCC
Confidence 3454 455666666665544 567888763
No 99
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.32 E-value=2.6e-10 Score=121.56 Aligned_cols=154 Identities=19% Similarity=0.204 Sum_probs=122.3
Q ss_pred HHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 008603 28 AVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLD 106 (560)
Q Consensus 28 ~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~ 106 (560)
..| ++++++++ ++.+.+++.+...++.+++.++.|+++||+|||+.+..+.+..++....+.+.++.+.+++.+++.
T Consensus 238 ~~p~~l~~~~~~--~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~ 315 (393)
T PRK15011 238 NMPLFIINELHL--PEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLN 315 (393)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 344 56778898 778889888887788888999999999999999988877766666555555677788888899999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheecc
Q 008603 107 GFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLP 186 (560)
Q Consensus 107 G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lp 186 (560)
+++.|...+..+.+..|.+|. +|++++++.+...++|..+++.+.. ...+..+|+..|++.+++.++.+++ .++.|
T Consensus 316 ~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G--~i~~~~g~~~~~~~~~~~~~~~~~~-~~~~~ 391 (393)
T PRK15011 316 AIYIGILGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAG--IVAEIWNYHAVFWFALVMIIATLFC-LLRIK 391 (393)
T ss_pred HHHHHHHHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHH--HHHHHhhhHHHHHHHHHHHHHHHHH-HHhhc
Confidence 988888877888889999986 5999999998888999999966553 3445568999999888888776554 44445
Q ss_pred C
Q 008603 187 E 187 (560)
Q Consensus 187 E 187 (560)
|
T Consensus 392 ~ 392 (393)
T PRK15011 392 D 392 (393)
T ss_pred C
Confidence 4
No 100
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.32 E-value=6.5e-11 Score=127.15 Aligned_cols=146 Identities=13% Similarity=0.177 Sum_probs=122.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~ 120 (560)
+..+.|.+.++..++.+++.++.|+++||+|||+.+.++.++.+++.+++.++++.+.+++.+++.|++.+...+....+
T Consensus 260 ~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 339 (420)
T PRK09528 260 GTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKY 339 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55788999999999999999999999999999999999999999988888888999999999999999998888888899
Q ss_pred HHhhcCCcchhhHhhH-HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 121 ISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 121 isE~~p~~~RG~~~~l-~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
+.|.+|++.|++..+. ++....+|..+++.+. ....+..+|+..|.+.+++.++..++.++.+++.
T Consensus 340 ~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~--G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 340 ITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLA--GNLYDSIGFQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHcCccceeeeeeehHHHHHHHHHHHHHHHH--HHHHHhhCchHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999887655 5667788888885554 4445566899999998888877766656665554
No 101
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.31 E-value=7.7e-12 Score=130.72 Aligned_cols=153 Identities=20% Similarity=0.255 Sum_probs=139.5
Q ss_pred HHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 008603 34 REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLA 113 (560)
Q Consensus 34 ~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~ 113 (560)
++...+.+.++.|++.++..+..++.+++.|.+.||+|+|..++++++++..+++++++.+++++++++|.++|+|.+..
T Consensus 97 ~~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~ 176 (464)
T KOG3764|consen 97 EAISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFA 176 (464)
T ss_pred hccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHH
Confidence 33444446689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcCCcc-hhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 114 VTLVPIYISETAPPEI-RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 114 ~~~~~~~isE~~p~~~-RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
.++...++++.+|.+. |++++|+.-...++|..++ +.++..+++..|.+..|.+++++.++-..+.++.++.+
T Consensus 177 ~tsglamlAd~f~~d~er~~vmGialgfislG~lvg--PpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~ 250 (464)
T KOG3764|consen 177 DTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVG--PPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPT 250 (464)
T ss_pred HhhhHHHHHHHcccchhhhHHHHHHHHHHhccceec--CCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcc
Confidence 9999999999999866 7999999999999999999 66777788889999999999999999888877777654
No 102
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.31 E-value=1.1e-10 Score=121.14 Aligned_cols=150 Identities=18% Similarity=0.126 Sum_probs=122.5
Q ss_pred HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhh--HHHHHHH
Q 008603 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPN--VYVLLLA 102 (560)
Q Consensus 25 ~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s--~~~lii~ 102 (560)
.....+.+.++++. +..+.+.+.+...++.++++++.|+++||+|||+.+.++.++.+++.+++.+.++ ...+++.
T Consensus 224 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T TIGR00890 224 LIGLYKPYGQSLGL--SDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLAT 301 (377)
T ss_pred HHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHH
Confidence 33445555677887 6788899999999999999999999999999999999999888888887776653 2334566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~ 178 (560)
.++.|++.+...+..+.+++|.+|+++|++..++.+....+|..+++.+. ....+..+|+..|.+.+++.++.+
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~--g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIA--SHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHH--HHHHhhhchhhHHHHHHHHHHHhc
Confidence 78888888888778888999999999999999999999999999986554 334456789999988888776643
No 103
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.30 E-value=2.2e-10 Score=124.56 Aligned_cols=163 Identities=15% Similarity=0.103 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hH--HHH
Q 008603 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NV--YVL 99 (560)
Q Consensus 24 ~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~--s~--~~l 99 (560)
......|++.+++|. +.....+......+..+++.++.++++||+|||+.++++.++.+++.+++.... +. ...
T Consensus 289 ~~~~~~p~i~~~~g~--~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 289 VVLYYAPEIFKTLGA--STDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred HHHHHHHHHHHHcCC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 344456888888888 445556666677788889999999999999999999999999888877765431 11 122
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHH----hccccchhHHHHHHHHHH
Q 008603 100 LLARLLDGFGIGL-AVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS----LMTAPSWRLMLGVLFIPS 174 (560)
Q Consensus 100 ii~R~l~G~g~G~-~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~----~~~~~~Wr~~f~i~ai~~ 174 (560)
+++-++.+++.+. ..+..+.+++|.+|+++|++++++.+....+|.++++....... ..+..+|+..|++.+++.
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (479)
T PRK10077 367 LLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHH
Confidence 2333444444443 23667899999999999999999999999999888755443222 234568888898888888
Q ss_pred HHHHHhhheeccCC
Q 008603 175 LIYFVLTIFYLPES 188 (560)
Q Consensus 175 ll~~il~~~~lpEs 188 (560)
++.+++.+++.||+
T Consensus 447 ~~~~~~~~~~~~e~ 460 (479)
T PRK10077 447 VLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHhccccC
Confidence 88777777788887
No 104
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.30 E-value=6.7e-10 Score=121.80 Aligned_cols=169 Identities=13% Similarity=0.161 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCChHHHHHH-HHHHHHHHHHHHhh
Q 008603 19 GWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRRPMLIVS-SVLYFIGGLVMLWS 93 (560)
Q Consensus 19 g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD----r~GRR~~lli~-~ll~ai~~il~~~a 93 (560)
-+......+.++.+.+++|. ++...+++..+..+..++.+++.|.++| |+|||+.++++ .+..+++.+++.++
T Consensus 17 q~~~~l~~~~l~~yl~~lg~--~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~ 94 (477)
T TIGR01301 17 QFGWALQLSLLTPYVQELGI--PHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFA 94 (477)
T ss_pred HHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence 34445556666667788999 8899999999999999999999999999 59999887764 66666666777776
Q ss_pred hhHH-----------------HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcch--hhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 94 PNVY-----------------VLLLARLLDGFGIGLAVTLVPIYISETAPPEIR--GLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 94 ~s~~-----------------~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~R--G~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
++.. .++++-.+..++.+...+...++++|++|+++| +.++++.+.+.++|..+++.....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~ 174 (477)
T TIGR01301 95 ADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAY 174 (477)
T ss_pred chhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6542 233333445568888888889999999999865 679999999999999999876654
Q ss_pred HHhccc-------------cchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 155 MSLMTA-------------PSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 155 l~~~~~-------------~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
...... .+.|..|++.++..++..+++.++.+|.|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 175 SGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 311110 16789999999999998888899999976
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.29 E-value=2.3e-10 Score=125.94 Aligned_cols=156 Identities=18% Similarity=0.167 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhh-
Q 008603 18 QGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSP- 94 (560)
Q Consensus 18 ~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-GRR~~lli~~ll~ai~~il~~~a~- 94 (560)
..+........+| ++.+++|+ ++.+.+.+.+.+.+...++.+++|+++||+ |||++++++.++.+++.++++...
T Consensus 21 e~fs~Yg~~~~L~~yL~~~lgl--s~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~ 98 (493)
T PRK15462 21 EYFSFYGMRALLILYLTNQLKY--DDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEI 98 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3333444444444 56777899 789999999999999999999999999999 999999999999999887776543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc--chhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Q 008603 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE--IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (560)
Q Consensus 95 s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~--~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai 172 (560)
+...+.++..+..++.|...+...++++|.+|++ +|..+.++.....++|.++++.+.. ...+..+|++.|.+.++
T Consensus 99 ~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g--~L~~~~Gw~~~F~iaai 176 (493)
T PRK15462 99 HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACG--YAQEEYSWAMGFGLAAV 176 (493)
T ss_pred chhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHH--HHHhhhChHHHHHHHHH
Confidence 2233344444555666776677788999999986 7999999999999999999966654 44456689999998776
Q ss_pred HHHHH
Q 008603 173 PSLIY 177 (560)
Q Consensus 173 ~~ll~ 177 (560)
..++.
T Consensus 177 gm~l~ 181 (493)
T PRK15462 177 GMIAG 181 (493)
T ss_pred HHHHH
Confidence 44443
No 106
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.26 E-value=3.8e-10 Score=123.33 Aligned_cols=170 Identities=16% Similarity=0.086 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
.+++..++...........+| ++++++|+ +..+.++..+...++.+++.++.|+++||+|||+.+.+...+.+++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~ 339 (467)
T PRK09556 262 LLCFANIFLYIVRIGIDNWSPVYAFQELGF--SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFT 339 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHH
Confidence 344444444444444455566 66778999 778999999999999999999999999999999877665444443332
Q ss_pred H--HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHH-HHHHHHHHHHHHHh--------
Q 008603 89 V--MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYCMVFGMSL-------- 157 (560)
Q Consensus 89 l--~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~l-G~~lg~li~~~l~~-------- 157 (560)
+ ....++...+.+.+++.|++..........+..|.+|++.||++.++.+...++ |..+++.+...+..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~ 419 (467)
T PRK09556 340 LGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPI 419 (467)
T ss_pred HHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccc
Confidence 2 223456666777888888655444344456778999999999999999988886 65676544433322
Q ss_pred --ccccchhHHHHHHHHHHHHHHHhh
Q 008603 158 --MTAPSWRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 158 --~~~~~Wr~~f~i~ai~~ll~~il~ 181 (560)
....+|+..|++..+..++.+++.
T Consensus 420 ~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 420 FGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred ccccccChHHHHHHHHHHHHHHHHHH
Confidence 004579999988877777765543
No 107
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.26 E-value=5.4e-10 Score=118.77 Aligned_cols=159 Identities=16% Similarity=0.170 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~ 102 (560)
......+|.+..+.+. ...++..+.+.++.+++.++.|++.||+|||+.+..+.++.+++.+++.+.++.+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T PRK05122 233 GTIATFITLYYAARGW----DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIG 308 (399)
T ss_pred HHHHHHHHHHHHHccc----ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3333444544455565 234556677788889999999999999999999999988888888888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhh
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
.++.|++.+...+.....+.|.+|++.|++..++.+....+|..+++.+. ....+..+|+..|.+.+++.++..++..
T Consensus 309 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 309 AALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLA--GLVASWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888889999999999999999999999988775443 3444556899999998888888766554
Q ss_pred eeccC
Q 008603 183 FYLPE 187 (560)
Q Consensus 183 ~~lpE 187 (560)
++.++
T Consensus 387 ~~~~~ 391 (399)
T PRK05122 387 LLYRR 391 (399)
T ss_pred Hhccc
Confidence 44333
No 108
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.26 E-value=1.7e-10 Score=123.36 Aligned_cols=172 Identities=14% Similarity=0.058 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh
Q 008603 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW 92 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~ 92 (560)
+..+.............|++.+++|. +....++......++.+++.++.|+++||+|||+.+.++.++.+++.+++.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 368 (481)
T TIGR00879 291 LQWFQQFTGINAIMYYSPTIFENAGV--STDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGI 368 (481)
T ss_pred HHHHHHHhCCeehHHHHHHHHHHcCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 33333333334445567888888998 5577888888999999999999999999999999999988887777666652
Q ss_pred -----hh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 008603 93 -----SP------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (560)
Q Consensus 93 -----a~------s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~ 161 (560)
.+ +...+....++.+.......+....+++|.+|++.|++.+++.+...++|.++++.+.. ...+..
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~--~~~~~~ 446 (481)
T TIGR00879 369 LGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFP--TMLESI 446 (481)
T ss_pred HhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHhc
Confidence 11 22222223332222222233556678899999999999999999999999998865543 333456
Q ss_pred chhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 162 SWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 162 ~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
+|++.|++.++++++.+++.+++.||+
T Consensus 447 ~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 447 GVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred CccceehhHHHHHHHHHHHHheecccC
Confidence 899999999999888888777888886
No 109
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.25 E-value=6.7e-10 Score=118.18 Aligned_cols=156 Identities=15% Similarity=0.077 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 008603 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLAR 103 (560)
Q Consensus 24 ~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R 103 (560)
.....+|.+.++.|. ++...+.+.+...++.+++.++.|+++||+|||+.+..+.+..+++.++..+.++.+.+.+.-
T Consensus 238 ~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (406)
T PRK11551 238 FLLNWLPSLLVGQGL--SRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAG 315 (406)
T ss_pred HHHHHHHHHHHhCCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 334456777777888 778899999999999999999999999999999999887777777777777777887788888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhh
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
++.|++.+...+..+.++.|.+|++.|++..++.+....+|..+++.+...+.. ...+|...+++.....++..++.+
T Consensus 316 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 393 (406)
T PRK11551 316 FAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLA-LGRSTVGVIGASIPVILVAALAAL 393 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhc-cCCchHHHHHHHHHHHHHHHHHHH
Confidence 889998888888889999999999999999999999999999998665543322 233566666666666555444433
No 110
>PRK12382 putative transporter; Provisional
Probab=99.25 E-value=5.5e-10 Score=118.56 Aligned_cols=157 Identities=17% Similarity=0.154 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~ 102 (560)
.......|.+.++.+. + ..++....+.++.++++++.|++.||+|||+.+.++..+.+++.+++.+.++.+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (392)
T PRK12382 233 AVIGTFVSLYFASKGW--A--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAG 308 (392)
T ss_pred hHHHHHHHHHHHhcCC--c--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 3344445545555666 2 34556667778888999999999999999999999998888888888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhh
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
.++.|++.+...+.....+.|.+|+++||+.+++.+....+|..+++.+. ....+..+|+..|.+.+++.++..++.+
T Consensus 309 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~--g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 309 AALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLA--GMLATSFGYPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCchHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888999999999999999999999999999885544 3445567899999999988888776655
Q ss_pred eec
Q 008603 183 FYL 185 (560)
Q Consensus 183 ~~l 185 (560)
++.
T Consensus 387 ~~~ 389 (392)
T PRK12382 387 LSF 389 (392)
T ss_pred hhc
Confidence 443
No 111
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.24 E-value=9.9e-10 Score=116.73 Aligned_cols=177 Identities=11% Similarity=-0.055 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHH--HHHHHHHHHHHHHH-HHHHhhhCChHHHHHHHHHH-
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIV--AMSLIGATCITTCS-GAIADWLGRRPMLIVSSVLY- 83 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~--s~~~lG~iig~~~~-G~LsDr~GRR~~lli~~ll~- 83 (560)
.+.++..++.++.......+.+|.+.++.|. +.++.|+.. +...+..++..++. ++.+||+|||+..++.+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~g~--~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLREDGA--PLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHH
Confidence 4456677899999999999999999999999 889999973 55577777777777 45789999998865554332
Q ss_pred HHHHHHHH-h--hhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc
Q 008603 84 FIGGLVML-W--SPN-VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT 159 (560)
Q Consensus 84 ai~~il~~-~--a~s-~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~ 159 (560)
++.....+ + ..+ ...++..-++.++..+...+....+..|..+++.++..++.......+|..++.... ....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~--~~l~~ 158 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGT--LVLFG 158 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHH--HHHHH
Confidence 22222222 1 222 333344445555666666677777888888888888888888777788888885333 34445
Q ss_pred ccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
..+||..|++.+++.++..+..++..|+.
T Consensus 159 ~~gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 159 KFGQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 67999999999998887666655554544
No 112
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.21 E-value=2.1e-09 Score=112.43 Aligned_cols=151 Identities=18% Similarity=0.226 Sum_probs=120.8
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 008603 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFG 109 (560)
Q Consensus 30 p~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g 109 (560)
+++.+++|. ++.+.+++.+...+..+++.++.|+++||+|||+.+.++.++..+..+...+.++.+.+++.+++.|++
T Consensus 224 ~~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 301 (375)
T TIGR00899 224 LLIIHELGL--PDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIF 301 (375)
T ss_pred HHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355678898 778888888777777788889999999999999998888777666666666677888888889999999
Q ss_pred HHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheecc
Q 008603 110 IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLP 186 (560)
Q Consensus 110 ~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lp 186 (560)
.+...+....++.|..|.+ +++.+++.+...++|..+++.+.. ...+..+|+..|++.+++.++..++. ++++
T Consensus 302 ~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g--~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~ 374 (375)
T TIGR00899 302 IGILAGIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGG--ILAERWSYHAVYWFAIVMLIVALFCL-LLIK 374 (375)
T ss_pred HHHHHHHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHH--HHHHhccchhHHHHHHHHHHHHHHHH-heec
Confidence 9988888888999998864 669999999998999999865543 33455689999999888887766553 4444
No 113
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.19 E-value=9.9e-10 Score=117.81 Aligned_cols=159 Identities=18% Similarity=0.120 Sum_probs=131.5
Q ss_pred HHHHHHHHHH-cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q 008603 26 AGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARL 104 (560)
Q Consensus 26 ~~~lp~i~~~-~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~ 104 (560)
....|.+.++ +|. ++...+++.+...++.+++.++.+++.||.++++.+.++.++.+++.++..+.++.+.++++.+
T Consensus 243 ~~~~p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (417)
T PRK10489 243 RVLYPALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLA 320 (417)
T ss_pred HHhhHHHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 3345555444 888 6789999999999999999999999999988888888888888888888888888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhee
Q 008603 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (560)
Q Consensus 105 l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~ 184 (560)
+.|++.+...+....++.|.+|++.||+.+++......+|..+++.+. ....+..+++..+.+.+++.++..++....
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~--G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 321 LFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL--GGLGAMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH--HHHHHHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 999999888778888999999999999999999999999999995554 444556678888888887777766666667
Q ss_pred ccCC
Q 008603 185 LPES 188 (560)
Q Consensus 185 lpEs 188 (560)
+|+.
T Consensus 399 ~~~~ 402 (417)
T PRK10489 399 LGEL 402 (417)
T ss_pred cccc
Confidence 7776
No 114
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.18 E-value=1.2e-09 Score=115.78 Aligned_cols=139 Identities=18% Similarity=0.159 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008603 44 IEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISE 123 (560)
Q Consensus 44 ~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE 123 (560)
..+.+.++..++.+++.++.|+++||+|||+.+.++.++.+++.+...+.++.+.+++.+++.|++.+...+....++.+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 35666677788889999999999999999999999988888887777777888888899999999999999999999999
Q ss_pred hcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhee
Q 008603 124 TAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (560)
Q Consensus 124 ~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~ 184 (560)
..|++.||+.+++.+....+|..+++.+. ....+..+|+..|++.+++.++..++.++.
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~--G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMG--AAISANYGFRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHH--HHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999996554 444566789999999999888877665443
No 115
>PRK09952 shikimate transporter; Provisional
Probab=99.18 E-value=4.8e-09 Score=113.81 Aligned_cols=157 Identities=13% Similarity=0.140 Sum_probs=110.5
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---h-hhHHHHHHHHH
Q 008603 29 VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW---S-PNVYVLLLARL 104 (560)
Q Consensus 29 lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~---a-~s~~~lii~R~ 104 (560)
.+++.+++|. +......+.....+..+++.++.|+++||+|||++++++.++.+++.+.+.. . ++...+++..+
T Consensus 274 ~~y~~~~~g~--s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (438)
T PRK09952 274 LNYSTQNLGL--PRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIM 351 (438)
T ss_pred HHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 3456778888 5565555555666677888999999999999999988887766555433322 1 23445555667
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHH-HHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhe
Q 008603 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFT-GCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (560)
Q Consensus 105 l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~-~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~ 183 (560)
+.+++.+...+..+.+++|.+|++.|+...++.... ..+|..+++.+...+......+|+..+.+.+++.++..+.. +
T Consensus 352 l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~-~ 430 (438)
T PRK09952 352 LANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTA-L 430 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHH-H
Confidence 778888888888899999999999999888886544 34677777655544433223358888888888777766554 3
Q ss_pred eccCC
Q 008603 184 YLPES 188 (560)
Q Consensus 184 ~lpEs 188 (560)
.++|+
T Consensus 431 ~~~~~ 435 (438)
T PRK09952 431 LMKDN 435 (438)
T ss_pred Hcccc
Confidence 45654
No 116
>PRK03545 putative arabinose transporter; Provisional
Probab=99.18 E-value=3.2e-09 Score=112.85 Aligned_cols=154 Identities=12% Similarity=0.029 Sum_probs=119.6
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHH
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG-LVMLWSPNVYVLLLARLL 105 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~-il~~~a~s~~~lii~R~l 105 (560)
...|++.+.+|. +....+++.+...++.++++++.|+++||+|||..+.. ..+..++. ++..+.++.+.++++.++
T Consensus 227 ~~~~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l 303 (390)
T PRK03545 227 YIEPFVQQVAGL--SENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVCLLLLLPAANSEWHLSVLSIF 303 (390)
T ss_pred HHHHHHHHhcCC--CccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHH
Confidence 345566777888 66888999999999999999999999999998875444 44443433 333456778888888999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheec
Q 008603 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYL 185 (560)
Q Consensus 106 ~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~l 185 (560)
.|++.+...+....++.+..| +.|++++++.+....+|..+++.+ +....+..+++..|++.+++.++..++.++..
T Consensus 304 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~--~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 304 WGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALL--GNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999887776777788888876 688999999999899999998554 45556778999999999988888776655554
Q ss_pred c
Q 008603 186 P 186 (560)
Q Consensus 186 p 186 (560)
+
T Consensus 381 ~ 381 (390)
T PRK03545 381 R 381 (390)
T ss_pred c
Confidence 4
No 117
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.17 E-value=9.4e-10 Score=121.39 Aligned_cols=163 Identities=13% Similarity=0.105 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHcCCCCChHH---------HHH-HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh
Q 008603 25 IAGAVLYIKREFHLETEPTI---------EGL-IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP 94 (560)
Q Consensus 25 ~~~~lp~i~~~~gls~s~~~---------~gl-i~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~ 94 (560)
.....|.+.++.|.+.+... ... ......++.+++.++.++++||+|||+.++++.++.+++.+++.+..
T Consensus 307 ~~~~~p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~ 386 (502)
T TIGR00887 307 VNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAY 386 (502)
T ss_pred cccccHHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 33346777778887432110 011 23344556777889999999999999999888877777666555432
Q ss_pred h----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc--------ccc
Q 008603 95 N----VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT--------APS 162 (560)
Q Consensus 95 s----~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~--------~~~ 162 (560)
+ ...+.+.-+...++.....+..+.+.+|.+|++.|+++.++.+....+|.++++.+...+...+ ..+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 466 (502)
T TIGR00887 387 NHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIW 466 (502)
T ss_pred HhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccccccccc
Confidence 1 1111111111222222233566788899999999999999999999999999866554443221 134
Q ss_pred hhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 163 WRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 163 Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
+...|++.+++.++..++ .+++||+
T Consensus 467 ~~~~~~i~~~~~~~~~i~-~~~lpEt 491 (502)
T TIGR00887 467 MGHVLEIFALFMFLGILF-TLLIPET 491 (502)
T ss_pred chHHHHHHHHHHHHHHHH-heEeccC
Confidence 456777777777776554 5788998
No 118
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.16 E-value=4.3e-09 Score=116.98 Aligned_cols=156 Identities=19% Similarity=0.191 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----hh
Q 008603 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-----SP 94 (560)
Q Consensus 20 ~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~-----a~ 94 (560)
+...+....++.+..++.- ++...+++..+..+..++.++++|.++||+.||++++.+-++.++..++.++ ..
T Consensus 24 lG~~~~~va~~wlv~~lt~--S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~ 101 (524)
T PF05977_consen 24 LGDWMQTVALAWLVTQLTG--SPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLL 101 (524)
T ss_pred HHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 3333333344544445544 8899999999999999999999999999999999999998877665544433 23
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Q 008603 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (560)
Q Consensus 95 s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ 174 (560)
+.+.+++.-++.|++.+...|+.++++.|+.|+++...++++.+...++...+|+.++. .+....|-.+.|.+.++..
T Consensus 102 ~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG--~Lva~~G~~~~f~inalsf 179 (524)
T PF05977_consen 102 SPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGG--ILVAFFGAAAAFLINALSF 179 (524)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999999999999999999999999999888855543 3333445667777776665
Q ss_pred HHHHH
Q 008603 175 LIYFV 179 (560)
Q Consensus 175 ll~~i 179 (560)
++..+
T Consensus 180 l~~i~ 184 (524)
T PF05977_consen 180 LISIL 184 (524)
T ss_pred HHHHH
Confidence 55433
No 119
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.14 E-value=1.5e-09 Score=118.59 Aligned_cols=153 Identities=8% Similarity=0.021 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHHHH--HHHHHHHHHHHHHhhhhHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRRPMLIV--SSVLYFIGGLVMLWSPNVYV 98 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~--GRR~~lli--~~ll~ai~~il~~~a~s~~~ 98 (560)
......+|.+.++++. +..+.+++.++..++.++++++.|+++||. ++|+...+ +.++.+++.+++.+.++++.
T Consensus 258 ~~~~~~l~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~ 335 (455)
T TIGR00892 258 FAPIIFLVPYAKDKGV--DEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTG 335 (455)
T ss_pred cchHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 3333445555667888 779999999999999999999999999974 33433333 33333444555566788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHHH
Q 008603 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLGVLFIPSLIY 177 (560)
Q Consensus 99 lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~-~Wr~~f~i~ai~~ll~ 177 (560)
+++.+++.|++.+...+..+.++.|.+|++++++.+++.+....+|..+++.+. ....+.. +|+..|++.+++.++.
T Consensus 336 ~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~--G~l~~~~g~~~~~f~~~~~~~li~ 413 (455)
T TIGR00892 336 LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLA--GRLVDATKNYKYIFYASGSIVVSA 413 (455)
T ss_pred HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccce--eeeehhcCCcchHHHHhhHHHHHH
Confidence 999999999999999899999999999999999999999999999999995444 3344444 5999999988877765
Q ss_pred HH
Q 008603 178 FV 179 (560)
Q Consensus 178 ~i 179 (560)
.+
T Consensus 414 ~~ 415 (455)
T TIGR00892 414 GL 415 (455)
T ss_pred HH
Confidence 44
No 120
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.12 E-value=4e-09 Score=110.09 Aligned_cols=158 Identities=22% Similarity=0.206 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH--HHH
Q 008603 14 GNLLQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG--LVM 90 (560)
Q Consensus 14 ~~fl~g~~~~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~--il~ 90 (560)
..++...........+|. ++++++. ++.+.+.+.....++.+++.++.|+++||+|||+.+.+..++..+.. ++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 304 (394)
T TIGR00883 227 LVIATTTTFYLITTYLPTYLTQTLGL--SANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLM 304 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455554 4577888 67889999999999999999999999999999998775554443332 222
Q ss_pred Hh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHH-HHHHHHHHHHHHHHHHHHHhccccc-hhHH
Q 008603 91 LW--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP-QFTGCVGMFLAYCMVFGMSLMTAPS-WRLM 166 (560)
Q Consensus 91 ~~--a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~-~~~~~lG~~lg~li~~~l~~~~~~~-Wr~~ 166 (560)
.+ .++.+.+++..++.|++.+...+..+.+++|.+|++.|++++++. +....+|..+++.+. ....+..+ |+..
T Consensus 305 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~--g~l~~~~g~~~~~ 382 (394)
T TIGR00883 305 ALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIA--AALVAMTGDWYAI 382 (394)
T ss_pred HHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHH--HHHHHHcCcchhH
Confidence 22 246677777888999999888899999999999999999999874 455567777775544 33334445 8777
Q ss_pred HHHHHHHHH
Q 008603 167 LGVLFIPSL 175 (560)
Q Consensus 167 f~i~ai~~l 175 (560)
++...+..+
T Consensus 383 ~~~~~~~~l 391 (394)
T TIGR00883 383 GYYLAALAL 391 (394)
T ss_pred HHHHHHHHH
Confidence 666655443
No 121
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.11 E-value=1e-08 Score=109.00 Aligned_cols=153 Identities=12% Similarity=0.067 Sum_probs=126.4
Q ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 008603 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (560)
Q Consensus 22 ~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii 101 (560)
........|.+.+++|. ++...|++.+...++.+++.++.+++.||+|+|+.+.++.++.++..++++++++.+.+++
T Consensus 221 ~~~~~~~~~~~l~~~g~--s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (382)
T TIGR00902 221 HAAYYGFSAIYWQAAGI--SASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFL 298 (382)
T ss_pred HHHHHHHHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHH
Confidence 33344445555567898 7799999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHH-HHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~-~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
..++.|+..+...+....|+.+. |++.|++..++++ ....+|..+++.+. ....+..++ ..|++.++++++.+++
T Consensus 299 ~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~--G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 299 LQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFA--GFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 9999999999876 45678888885554 444455575 5677777777765443
No 122
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.10 E-value=1.7e-09 Score=118.66 Aligned_cols=179 Identities=11% Similarity=0.139 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCC-hHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGR-RPMLIVSSVL 82 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~-~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD----r~GR-R~~lli~~ll 82 (560)
+.-.++.+...+......+ +..++.+.+|+ ++...|.+..+.-+.-.+..|+.|.++| |+|| |+.++++.+.
T Consensus 9 ~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gl--s~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~ 86 (473)
T PRK10429 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGL--SVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLA 86 (473)
T ss_pred HhhccchhHHhHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHH
Confidence 3444555555555555555 45567777899 8899999999999999999999999999 5698 6788888888
Q ss_pred HHHHHHHHHhhhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 83 YFIGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 83 ~ai~~il~~~a~s------~~~lii~R~l~G~g~G~~~~~~~~~isE~~-p~~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
.+++.+++...++ +..+++..++.+++.....+...++++|+. ++++|.+.+++-..+.++|..+........
T Consensus 87 ~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~ 166 (473)
T PRK10429 87 NSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPF 166 (473)
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887666644331 334555666777788888788889999999 589999999987777777755543322211
Q ss_pred H--h---ccccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 156 S--L---MTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 156 ~--~---~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
. . .+..+|+....+.+++.++..++.++..+|.+
T Consensus 167 ~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~ 205 (473)
T PRK10429 167 VNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY 205 (473)
T ss_pred HHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecC
Confidence 1 1 11236788877777777776666666677753
No 123
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.10 E-value=5.8e-09 Score=108.31 Aligned_cols=165 Identities=21% Similarity=0.196 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH--HHHH------HHHH
Q 008603 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRP--MLIV------SSVL 82 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~--~lli------~~ll 82 (560)
.+..++............| ++.+.++. ++.+.+++.+...++.+++.++.|+++||+|||+ .... +.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQERGL--SILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLV 298 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHhcc--cHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHH
Confidence 3344444444445555555 45667888 7789999999999999999999999999999996 1111 1111
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc
Q 008603 83 YFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS 162 (560)
Q Consensus 83 ~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~ 162 (560)
..+..+.....++.+..+...++.+++.+ ..+....+++|.+|++.|++.+++.+....+|..+++.+. ....+..+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~--g~l~~~~g 375 (399)
T TIGR00893 299 LSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVI--GAIAATTG 375 (399)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHh--hhhccCCC
Confidence 11111111112344444444444444444 6688899999999999999999999999999999985444 44455666
Q ss_pred -hhHHHHHHHHHHHHHHHhh
Q 008603 163 -WRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 163 -Wr~~f~i~ai~~ll~~il~ 181 (560)
|+..|.+.+++.++..++.
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 376 SFAGALMVVAALALIGALSY 395 (399)
T ss_pred chhHHHHHHHHHHHHHHHHH
Confidence 9999988888877765543
No 124
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.10 E-value=1.2e-08 Score=109.08 Aligned_cols=162 Identities=14% Similarity=0.070 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHH-HHHHHHHHHHHHHHh-
Q 008603 15 NLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLI-VSSVLYFIGGLVMLW- 92 (560)
Q Consensus 15 ~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~ll-i~~ll~ai~~il~~~- 92 (560)
.++............|.+.+++|. ++.+.+.+.+...++.+++.++.|+++||+|||+.+. .+.+..+++.++..+
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~ 308 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAELGF--STSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYI 308 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHH
Confidence 333333344445567777788998 6688888888999999999999999999999887664 333333333333322
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 93 ----SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 93 ----a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
.++.+.+++..++.|++.+...+ ....++|..| ++||++.++.+....+|..+++.+. ....+..+|+..|+
T Consensus 309 ~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~--g~l~~~~g~~~~~~ 384 (402)
T TIGR00897 309 PQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIA--VLFIGFFGAIGVVW 384 (402)
T ss_pred HHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHH--HHHHhhcchHHHHH
Confidence 24567777888899998887644 4556677655 6899999999999999999986555 34455678999999
Q ss_pred HHHHHHHHHHHhhh
Q 008603 169 VLFIPSLIYFVLTI 182 (560)
Q Consensus 169 i~ai~~ll~~il~~ 182 (560)
+.+++.++..++..
T Consensus 385 ~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 385 IFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 99888877666543
No 125
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.10 E-value=5.6e-09 Score=114.03 Aligned_cols=180 Identities=22% Similarity=0.220 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~ 86 (560)
+.+++.++..+.+ ...+......+-++-|+ +..+.-+++....+..++.++++..+.||+|||+.++++..++.+.
T Consensus 273 i~~~v~~~qq~sG--i~ai~~Yst~i~~~aG~--~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 273 IGIVVSFAQQFSG--INAIFFYSTSIFKTAGF--TPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHhcC--cceeHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 3334444443333 35555566778888899 7788889999999999999999999999999999999999999888
Q ss_pred HHHHHhhh---hHH------HHHHHHHHHH--HHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 87 GLVMLWSP---NVY------VLLLARLLDG--FGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 87 ~il~~~a~---s~~------~lii~R~l~G--~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
.+++...- +.. ..+++.++.. ++.|.. |..+.+.+|.+|++.|..+.++......+..++.....+.+
T Consensus 349 ~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~g-pi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l 427 (485)
T KOG0569|consen 349 LLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPG-PIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPL 427 (485)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCC-chhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87776521 111 2233444433 444433 77788999999999999999999888888877764333332
Q ss_pred HhccccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHH
Q 008603 156 SLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLE 200 (560)
Q Consensus 156 ~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~e 200 (560)
.+..|- ..|.+..+++++.+++.++++||| |||..+
T Consensus 428 --~~~~g~-~~filF~i~~~~~~i~~~~~lPET------kgr~~~ 463 (485)
T KOG0569|consen 428 --QNVIGP-YVFILFVIPLAIFLIYLYRYLPET------KGRTPY 463 (485)
T ss_pred --HHHhcc-hhhHHHHHHHHHHHHHHHHhCccc------CCCCHH
Confidence 223333 788888899999899999999999 666543
No 126
>PRK03699 putative transporter; Provisional
Probab=99.10 E-value=4.9e-09 Score=111.80 Aligned_cols=164 Identities=18% Similarity=0.105 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~ 90 (560)
.++.++...........+| ++++.+|+ ++.+.+.+.+.+.++.++++++.|+++||++||+.+.....+.++..++.
T Consensus 211 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 288 (394)
T PRK03699 211 AIAALLYILAQLTFISWVPEYAQKKFGM--SLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLF 288 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 3333443343444445555 45577899 77899999999999999999999999999999999988887777777777
Q ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHH
Q 008603 91 LWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVL 170 (560)
Q Consensus 91 ~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ 170 (560)
...++...+.+..++.|++.+...+....+..|..|. .+++..+.......+|..+++.+. ....+..+|+..|++.
T Consensus 289 ~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~--G~l~~~~g~~~~~~~~ 365 (394)
T PRK03699 289 VNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVT--SPIVAHFGLQAALLTA 365 (394)
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHH--HHHHHHhCchhhhhhh
Confidence 6777777777778889998888878878888887764 467777888888889998885554 3444567899999888
Q ss_pred HHHHHHHHHh
Q 008603 171 FIPSLIYFVL 180 (560)
Q Consensus 171 ai~~ll~~il 180 (560)
+++.++.+++
T Consensus 366 ~~~~~~~~~~ 375 (394)
T PRK03699 366 NGLYAVVFVM 375 (394)
T ss_pred HHHHHHHHHH
Confidence 8887776554
No 127
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.10 E-value=1.1e-08 Score=108.52 Aligned_cols=151 Identities=18% Similarity=0.162 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~ 102 (560)
......+|.+.++.+. ++...+.+.+...++.++++++.|+++||+|||+++..+..+.+++.+... + ...+...
T Consensus 217 ~~~~~~lp~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~ 291 (381)
T PRK03633 217 GSLYGLMPLYLNHQGM--SDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPA 291 (381)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHH
Confidence 3334456766677788 778899999999999999999999999999999999888877777655443 2 2334456
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
.++.|++.....+.+..++.|..|+++++...+..+...++|..+++.+. ....+..+|++.|.+.+.+.++..++
T Consensus 292 ~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~--G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 292 LFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFT--AMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 77788877777788899999999998888888888888899999995544 44556678999999988888776554
No 128
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.09 E-value=7.8e-09 Score=110.46 Aligned_cols=164 Identities=20% Similarity=0.228 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh-hHHH
Q 008603 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP-NVYV 98 (560)
Q Consensus 20 ~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~-s~~~ 98 (560)
.........+|.+.+++|. +....+...+.+.++.++++++.|++.||+|||+.+.++..+.+++.+++.+.+ +...
T Consensus 219 ~~~~~~~~~lp~~l~~~g~--s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 296 (393)
T PRK09705 219 GGYASLIAWLPAFYIEIGA--SAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV 296 (393)
T ss_pred HHHHHHHHHHHHHHHHcCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHH
Confidence 3334444456655566888 778999999999999999999999999999999999988888777776655433 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcccc-chhHHHHHHHHHHHH
Q 008603 99 LLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLGVLFIPSLI 176 (560)
Q Consensus 99 lii~R~l~G~g~G~~~~~~~~~isE~~p-~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~-~Wr~~f~i~ai~~ll 176 (560)
+ .-++.|++.+...+.+.....+.++ ++.|++.+++.+....++..+++.....+ .+.. +|...|.+.++..++
T Consensus 297 ~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l--~~~~g~~~~~~~~~~~~~~~ 372 (393)
T PRK09705 297 L--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVL--RSISGNYLMDWAFHALCVVG 372 (393)
T ss_pred H--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhCCchHHHHHHHHHHHH
Confidence 2 2346788888877777777777775 67899999999999999888886555333 3333 588888888888887
Q ss_pred HHHhhheeccCCh
Q 008603 177 YFVLTIFYLPESP 189 (560)
Q Consensus 177 ~~il~~~~lpEsP 189 (560)
..+..+.+.||++
T Consensus 373 ~~~~~~~~~~~~~ 385 (393)
T PRK09705 373 LMIITLRFAPARF 385 (393)
T ss_pred HHHHHHHhccccc
Confidence 7777777888874
No 129
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.07 E-value=6.2e-09 Score=109.57 Aligned_cols=137 Identities=25% Similarity=0.243 Sum_probs=107.7
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHH
Q 008603 29 VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL-VMLWSPNVYVLLLARLLDG 107 (560)
Q Consensus 29 lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i-l~~~a~s~~~lii~R~l~G 107 (560)
.+++.+++|. +..+.+++.+...++.+++.++.|++.||+|||+.+.++.++..+..+ +....++.+.+.+..++.+
T Consensus 262 ~~~~~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (405)
T TIGR00891 262 PTYLKADLGL--SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQ 339 (405)
T ss_pred HHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHH
Confidence 4466778898 779999999999999999999999999999999998888776543333 3334456667777778888
Q ss_pred HHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc-hhHHHHH
Q 008603 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS-WRLMLGV 169 (560)
Q Consensus 108 ~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~-Wr~~f~i 169 (560)
+..+...+..+.+++|.+|++.|++++++.+....+|..+++.+.. ...+..+ |+..+..
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g--~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGA--LLAQRLDEYGTALAS 400 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHH--HHHHhccccchhHHh
Confidence 7777777888899999999999999999999999999999866553 3344445 6665544
No 130
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.04 E-value=2.4e-08 Score=108.71 Aligned_cols=157 Identities=20% Similarity=0.130 Sum_probs=103.8
Q ss_pred HHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CChHHH-HHHHHHHHHHHHHHHh--hhhH
Q 008603 23 ATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRRPML-IVSSVLYFIGGLVMLW--SPNV 96 (560)
Q Consensus 23 ~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~--GRR~~l-li~~ll~ai~~il~~~--a~s~ 96 (560)
......+|. +++++|+ +..+.+++...+.++.+++.++.|+++||+ +||... +....+..++.++..+ ..+.
T Consensus 270 ~~~~~~~P~~l~~~~g~--s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~ 347 (452)
T PRK11273 270 YGILDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNP 347 (452)
T ss_pred HHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccCh
Confidence 334445564 5556788 668888888888899999999999999999 555433 2222333333332222 2344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHH-HHHHHHHHHhccccchhHHHHHHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFL-AYCMVFGMSLMTAPSWRLMLGVLFIPSL 175 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~l-g~li~~~l~~~~~~~Wr~~f~i~ai~~l 175 (560)
..++++.++.|++..........++.|.+|++.||+++++.+....+|..+ ++.+. ....+..+|+..|++.++.++
T Consensus 348 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~--g~l~~~~g~~~~f~~~~~~~~ 425 (452)
T PRK11273 348 TVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV--GYTVDFFGWDGGFMVMIGGSI 425 (452)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhH--HHHHHHhcchHHHHHHHHHHH
Confidence 445555566666543333344557789999999999999998887777544 54333 334456689999998888877
Q ss_pred HHHHhhhe
Q 008603 176 IYFVLTIF 183 (560)
Q Consensus 176 l~~il~~~ 183 (560)
+.+++...
T Consensus 426 ~~~~~~~~ 433 (452)
T PRK11273 426 LAVILLIV 433 (452)
T ss_pred HHHHHHHH
Confidence 76655443
No 131
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.04 E-value=2.3e-08 Score=104.06 Aligned_cols=156 Identities=21% Similarity=0.332 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 008603 20 WDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (560)
Q Consensus 20 ~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~l 99 (560)
-..+...|+++.+++++|+ +.+..|++++...+...+.+++..++..|+|.++.+.+++++.+++.++=... +...+
T Consensus 26 ~~itsvgPLL~~Ir~~~gl--s~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L 102 (395)
T COG2807 26 PAITSVGPLLDEIRQDLGL--SFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLL 102 (395)
T ss_pred hhhhhhhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHH
Confidence 4457778899999999999 77999999999999999999999999999999999999999999999988876 78889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
+.+-++.|.+.+...+..|.++-+.||.+ -+..++++.....+|..++......+.... .+||..+.+-++++++.++
T Consensus 103 ~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~-~gW~~aL~~WAl~allAl~ 180 (395)
T COG2807 103 FLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHS-GGWRGALGFWALLALLALL 180 (395)
T ss_pred HHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-ccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999865 588999999998888888855554443322 5899999999999998766
Q ss_pred h
Q 008603 180 L 180 (560)
Q Consensus 180 l 180 (560)
+
T Consensus 181 ~ 181 (395)
T COG2807 181 I 181 (395)
T ss_pred H
Confidence 5
No 132
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=1e-09 Score=121.39 Aligned_cols=177 Identities=18% Similarity=0.159 Sum_probs=142.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
|.+++..++.++...-.......+.+.++++|+. +..+.+|+.++......+..++.+.++||+|.|++.+++.++.+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~--s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGS--SSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCC--CccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 4444555555554433344455678899999998 66789999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccch
Q 008603 85 IGGLVMLWSPNVYVLLLAR-LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSW 163 (560)
Q Consensus 85 i~~il~~~a~s~~~lii~R-~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~W 163 (560)
++.++.+|+++++.+++.. ++.|+|.|..+....+.+..+| .++|+.++++......+|.++-+.+. -.+.+..||
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~--~~l~~~~G~ 199 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLL--KYLLSKYGW 199 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHH--HHHHHHhCc
Confidence 9999999999998777764 8899999999888888877554 57899999998888888777653322 344567799
Q ss_pred hHHHHHHHHHHHHHHHhhheecc
Q 008603 164 RLMLGVLFIPSLIYFVLTIFYLP 186 (560)
Q Consensus 164 r~~f~i~ai~~ll~~il~~~~lp 186 (560)
|..+++.+.+.+-.++....+-|
T Consensus 200 r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 200 RGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999888777776666666
No 133
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.03 E-value=1.1e-09 Score=118.35 Aligned_cols=159 Identities=22% Similarity=0.377 Sum_probs=126.4
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCCh-HHHHHHHHHHHHHHHHHHhh-h------
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRR-PMLIVSSVLYFIGGLVMLWS-P------ 94 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD----r~GRR-~~lli~~ll~ai~~il~~~a-~------ 94 (560)
...+++.+.+++ ++...|++..+.-+-.++..|+.|.++| |+||| +.++++.++.+++.+++... +
T Consensus 23 ~~~~f~~~~~gl--~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~ 100 (428)
T PF13347_consen 23 YLLYFYTDVLGL--SPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFT 100 (428)
T ss_pred HHHHHHHHHcCC--CHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhh
Confidence 456778888899 8899999999999999999999999999 89965 67778888888888877765 4
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcchhhHhhHHHHHHHHHHHHHHHHHHHHH-hcc---c-cchhHHH
Q 008603 95 -NVYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-LMT---A-PSWRLML 167 (560)
Q Consensus 95 -s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p-~~~RG~~~~l~~~~~~lG~~lg~li~~~l~-~~~---~-~~Wr~~f 167 (560)
....+.+..++..++.........++++|+.+ +++|.+..+..+.+..+|.++.......+. ... . .+|+++.
T Consensus 101 ~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~ 180 (428)
T PF13347_consen 101 AKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMA 180 (428)
T ss_pred hHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHH
Confidence 22345666667788888888888899999998 578999999999988888865433333322 111 1 2799999
Q ss_pred HHHHHHHHHHHHhhheeccC
Q 008603 168 GVLFIPSLIYFVLTIFYLPE 187 (560)
Q Consensus 168 ~i~ai~~ll~~il~~~~lpE 187 (560)
.+.+++.++..++..+..+|
T Consensus 181 ~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 181 LVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred HHHHHHHHHHhhhhhheeee
Confidence 99999999988888888899
No 134
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.03 E-value=1.1e-08 Score=112.05 Aligned_cols=144 Identities=19% Similarity=0.160 Sum_probs=107.9
Q ss_pred HHHHHH-HHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHH
Q 008603 27 GAVLYI-KREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--PNVYVLLLAR 103 (560)
Q Consensus 27 ~~lp~i-~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a--~s~~~lii~R 103 (560)
..+|.+ ++++|. +..+.+++.+...++.+++.++.|+++||+|||+.++++.++..+..++.... .+.+.+.+..
T Consensus 296 ~~lp~~l~~~~g~--~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 296 ALLPTYLKTDLGY--DPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 445544 468898 77999999999999999999999999999999999888877766655544332 3344444555
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ 174 (560)
++.++......+..+.+++|.+|++.|++.+++.+....+|..+++.+. ....+..+|+..+.+.++..
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~--g~l~~~~g~~~~~~~~~~~~ 442 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILG--ALIAQRLDLGTALASLSFSL 442 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHH--HHHhccCChHHHHHHHHHHH
Confidence 5544443344567788999999999999999999999999999986544 45556678888776555443
No 135
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.01 E-value=2.6e-08 Score=106.71 Aligned_cols=137 Identities=15% Similarity=0.063 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHHHH
Q 008603 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLLLA 102 (560)
Q Consensus 25 ~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~--s~~~lii~ 102 (560)
+...+|.+.++.|. ++...+.+.+...++.++++++.|+++||+|||+.+..+.++.++..+.....+ +...+.+.
T Consensus 250 ~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (426)
T PRK12307 250 IFGLLPTYLAGEGF--DTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGAC 327 (426)
T ss_pred HHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHH
Confidence 34456666667788 778889999999999999999999999999999999888877766655444332 22222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
.+..+++.....+..+.++.|.+|++.||+++++......+|..+++.+.. ...+..++..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g--~l~~~~g~~~ 388 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAAT--WLGITMGLGA 388 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHH--HHHHcccHHH
Confidence 222222222334566788899999999999999999888999888865543 3334445443
No 136
>TIGR00895 2A0115 benzoate transport.
Probab=99.01 E-value=2.3e-08 Score=104.61 Aligned_cols=135 Identities=16% Similarity=0.044 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhh
Q 008603 16 LLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPN 95 (560)
Q Consensus 16 fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s 95 (560)
++...........+|++.++++. ++.+.+++.+...++.+++.++.|+++||+|||+.+....+..+...++....++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (398)
T TIGR00895 260 FMLLVGVYFLTNWLPKLMVELGF--SLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFS 337 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhC
Confidence 33334444455567788889998 7788999999999999999999999999999995555444443333333333567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 96 VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 96 ~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
...+++..++.|++.+...+....+++|.+|++.|++..++......+|..+++.+.
T Consensus 338 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~ 394 (398)
T TIGR00895 338 PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILA 394 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 777788889999999999999999999999999999999999999999998886544
No 137
>PRK15075 citrate-proton symporter; Provisional
Probab=99.01 E-value=4.7e-08 Score=105.76 Aligned_cols=129 Identities=20% Similarity=0.155 Sum_probs=89.6
Q ss_pred HHHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH-HH---hhhhH
Q 008603 22 NATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV-ML---WSPNV 96 (560)
Q Consensus 22 ~~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il-~~---~a~s~ 96 (560)
........|. +++.+|. +..+.++......++.+++.++.|+++||+|||+.++++.++.++..+. .. ..+++
T Consensus 254 ~~~~~~~~p~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (434)
T PRK15075 254 FYLITVYTPTFGKTVLHL--SAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSF 331 (434)
T ss_pred HHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCch
Confidence 3444455565 4555898 6688888888888999999999999999999999887765544332221 11 12344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHH-HHHHHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGC-VGMFLAYCMV 152 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~-lG~~lg~li~ 152 (560)
..+.+..++.+++.+...+....+++|.+|++.|+...++...... ++..+++.+.
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~ 388 (434)
T PRK15075 332 ARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAIS 388 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHH
Confidence 4444556667777777777777899999999999999998644443 3345554433
No 138
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.01 E-value=1.3e-08 Score=122.80 Aligned_cols=148 Identities=20% Similarity=0.167 Sum_probs=120.4
Q ss_pred HHHHHHHHcCCCCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 008603 28 AVLYIKREFHLETEPT-IEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLD 106 (560)
Q Consensus 28 ~lp~i~~~~gls~s~~-~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~ 106 (560)
..+++.+.+|+ +.. ..+++.+...++.+++.++.|+++||+++|+++.++.++.+++.+++.+..+.+.++++.++.
T Consensus 255 ~~~~~~~~~g~--s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 255 FPAYAKEVLGL--DNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred hHHHHHHHhCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 34466778898 667 889999999999999999999999999999999888888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 008603 107 GFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (560)
Q Consensus 107 G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~ 178 (560)
|++.+...+...+++.+.+|++.||+++++.++...+|.+++..+...+.. ...++...|++.+++.++..
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~ 403 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGT 403 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHH
Confidence 999999988899999999999999999999999998888776554433322 22345556666555544433
No 139
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.99 E-value=2.6e-08 Score=107.86 Aligned_cols=171 Identities=16% Similarity=0.107 Sum_probs=110.9
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh--C-ChHHHHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--G-RRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~--G-RR~~lli~~ll~ai~~i 88 (560)
++.++...........+| ++.+++|+ +..+.+...+.+.++.++++++.|+++||+ + ||+......+...+...
T Consensus 250 ~~~~~~~~~~~~~~~~~p~~l~~~~g~--s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~ 327 (434)
T PRK11663 250 FSYVLVYVVRAAINDWGNLYMSETLGV--DLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG 327 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCC--CHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHH
Confidence 333333333344444555 44577898 778899999999999999999999999999 3 33332222111111111
Q ss_pred HHH--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Q 008603 89 VML--WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (560)
Q Consensus 89 l~~--~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~ 166 (560)
+.. ...+...+.+..+..|++..........+++|.+|++.|++.+++.+....+|..+++.+.. ...+..+|+..
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g--~l~~~~g~~~~ 405 (434)
T PRK11663 328 SLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLA--KVLEIWHWTGF 405 (434)
T ss_pred HHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHH--HHHHhcccHHH
Confidence 111 12233333344445555433333334567789999999999999999999999999865553 44456789999
Q ss_pred HHHHHHHHHHHHHhhheeccC
Q 008603 167 LGVLFIPSLIYFVLTIFYLPE 187 (560)
Q Consensus 167 f~i~ai~~ll~~il~~~~lpE 187 (560)
|.+.+++.++..+..+++.++
T Consensus 406 f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 406 FVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 999999888876665554443
No 140
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.98 E-value=3.7e-08 Score=101.86 Aligned_cols=124 Identities=15% Similarity=0.151 Sum_probs=109.3
Q ss_pred HHHHHHHHH-cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHH
Q 008603 27 GAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPN-VYVLLLARL 104 (560)
Q Consensus 27 ~~lp~i~~~-~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s-~~~lii~R~ 104 (560)
...|++.++ ++. ++.+.+++.....++.+++.++.+++.||+|||+.+..+.++.+++.++..+.++ .+.+++..+
T Consensus 232 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (365)
T TIGR00900 232 ALFPYVQSKYLGR--GSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWF 309 (365)
T ss_pred HHhHHHHHHHhCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHH
Confidence 456766554 788 7789999999999999999999999999999999999888888888777777774 888889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 105 l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
+.|++.+...+....++.|.+|++.|++..++.+....+|..+++.+.
T Consensus 310 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~ 357 (365)
T TIGR00900 310 AIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILA 357 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998886554
No 141
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.98 E-value=8.9e-08 Score=103.53 Aligned_cols=153 Identities=15% Similarity=0.141 Sum_probs=94.0
Q ss_pred HHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH--h--hhhHHHHH
Q 008603 26 AGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML--W--SPNVYVLL 100 (560)
Q Consensus 26 ~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~--~--a~s~~~li 100 (560)
...+| ++.+.+|. +..+.+...++..++.+++.++.|+++||+|||+.++++.++.++..+... . .++....+
T Consensus 263 ~~~lp~~l~~~~g~--s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (432)
T PRK10406 263 TTYMQKYLVNTAGM--HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAF 340 (432)
T ss_pred HHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH
Confidence 33445 45667888 668888888888888889999999999999999988776665443332221 1 22333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHH-HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVG-MFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG-~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
..-++.++..+...+..+.+++|++|++.|+++.++.+...++. ....+.+.. .......|...+++.++..++.++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~--~l~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 341 GLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL--SLKSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH--HHHHhCCCcHHHHHHHHHHHHHHH
Confidence 22233334444444566788999999999999999987665542 223433222 222222355556655555555544
Q ss_pred hhh
Q 008603 180 LTI 182 (560)
Q Consensus 180 l~~ 182 (560)
..+
T Consensus 419 ~~~ 421 (432)
T PRK10406 419 VSL 421 (432)
T ss_pred HHH
Confidence 433
No 142
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.96 E-value=8.6e-08 Score=105.51 Aligned_cols=161 Identities=20% Similarity=0.171 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHh--------
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLW-------- 92 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR--~~lli~~ll~ai~~il~~~-------- 92 (560)
+++.....+.++++|+ +..+...+..+..+.+++|++++|++.||+|.| ++++++.++..+..+.-.+
T Consensus 299 ti~~~~~i~a~~~lg~--s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g 376 (477)
T PF11700_consen 299 TIISFAGIYATEVLGM--STTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFG 376 (477)
T ss_pred HHHHHHHHHHHHhcCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccC
Confidence 3334455677789999 779999999999999999999999999999999 8888888777554444333
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHH
Q 008603 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFI 172 (560)
Q Consensus 93 a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai 172 (560)
..+.+.+.+.-++.|+..|...+..-++.+|+.|+.+.+..++++.+..-...++++++........ .+-|..+....+
T Consensus 377 ~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t-g~~r~g~~~l~~ 455 (477)
T PF11700_consen 377 LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT-GSQRYGFLFLLV 455 (477)
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 5677888889999999999999999999999999999999999999999999999977664443322 257888887777
Q ss_pred HHHHHHHhhheeccC
Q 008603 173 PSLIYFVLTIFYLPE 187 (560)
Q Consensus 173 ~~ll~~il~~~~lpE 187 (560)
+.++.+++. +.++.
T Consensus 456 lf~~gl~ll-~~v~~ 469 (477)
T PF11700_consen 456 LFLIGLILL-FFVDV 469 (477)
T ss_pred HHHHHHHHH-hhccc
Confidence 777766553 44443
No 143
>PRK10504 putative transporter; Provisional
Probab=98.95 E-value=6.1e-08 Score=105.57 Aligned_cols=135 Identities=12% Similarity=0.150 Sum_probs=107.6
Q ss_pred HHHHHHHHHHHHHHHHHH-HcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--
Q 008603 17 LQGWDNATIAGAVLYIKR-EFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-- 93 (560)
Q Consensus 17 l~g~~~~~~~~~lp~i~~-~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a-- 93 (560)
+............|++.+ .+|. ++...+++.....++.+++.++.+++.||+|||+++.++.++.++..+++.+.
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 272 AGRIGSGMLPFMTPVFLQIGLGF--SPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc
Confidence 333334445556776555 5788 78999999999999999999999999999999999999988888777666553
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 94 -PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 94 -~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
++.+.+.+..++.|++.+...+..+.++.+.+|++.|+..+++.++...+|..+++.+..
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g 410 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAG 410 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 334445556778888888888888999999999999999999999999999888865543
No 144
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.94 E-value=6.5e-08 Score=103.01 Aligned_cols=140 Identities=12% Similarity=0.223 Sum_probs=116.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIY 120 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~ 120 (560)
+....|.+.++..+..+++.++.|++.||+|||+.+.++.++.++..++..++++.+.+++.+++.|++.......+..+
T Consensus 252 ~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~ 331 (396)
T TIGR00882 252 GTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKY 331 (396)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44677888888888899999999999999999999999999888888887888899988999999999988777777778
Q ss_pred HHhhcCCcchhhHhhH-HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhh
Q 008603 121 ISETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 121 isE~~p~~~RG~~~~l-~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
+.+..|++.+++..+. .+....+|..+++.+. ....+..||+.+|.+.+++.++..++..
T Consensus 332 ~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~--G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 332 ITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLA--GNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHhCCcceEEEeehHHHHHHHHHHHHHHHHhH--HHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 8888999999887766 5677888888885444 4445566899999999888887766543
No 145
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.94 E-value=6.1e-08 Score=106.48 Aligned_cols=174 Identities=15% Similarity=0.053 Sum_probs=125.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----ChHHHHHHHHH
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RRPMLIVSSVL 82 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G-----RR~~lli~~ll 82 (560)
..++...++.+|..........|.+++++|+ ++++.+...+...+...+ .++.|+++||++ ||+.++++.++
T Consensus 28 ~~~~~~~y~~qGl~~l~~~~~~~~l~~~lg~--s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l 104 (468)
T TIGR00788 28 LAIGLQVLFVKGIAGLMRLPLSPMLTDDLGL--DGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLL 104 (468)
T ss_pred HHHHHHHHHHhhHHHHhhhhhhHHHHHhcCC--CHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHH
Confidence 3455556788888744445566788889999 889999999999998877 455999999998 77777877766
Q ss_pred HH-HHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHH---HHHHHHHHHHHHHHHHHHHh
Q 008603 83 YF-IGGLVMLWSPNV-YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP---QFTGCVGMFLAYCMVFGMSL 157 (560)
Q Consensus 83 ~a-i~~il~~~a~s~-~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~---~~~~~lG~~lg~li~~~l~~ 157 (560)
.. +....++..++. ....+..++.+++.+...+++-.+..|..+ +.+....+.. ....++|..++..+. ...
T Consensus 105 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~--G~l 181 (468)
T TIGR00788 105 GSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLG--GPL 181 (468)
T ss_pred HHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHH--HHH
Confidence 63 443334444453 344458899999999999999999999999 5555443333 223347777774444 344
Q ss_pred ccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 158 MTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 158 ~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
.+..+|+..|++.+++.++. ++..+++||.
T Consensus 182 ~~~~~~~~~f~~~a~l~ll~-~~~~~~~~E~ 211 (468)
T TIGR00788 182 LDKTLTRILFLITAALLLLQ-LFVSNLSKER 211 (468)
T ss_pred HHhcCcchHHHHHHHHHHHH-HHHHHhcccc
Confidence 45668999999998888876 3445667885
No 146
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.93 E-value=4.5e-09 Score=114.24 Aligned_cols=187 Identities=20% Similarity=0.276 Sum_probs=146.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR-RPMLIVSSVL 82 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GR-R~~lli~~ll 82 (560)
.|..+.++.+..|+.+...+++.+..-.+.++++.+.+.+..|++.++..+|..++++++|+.+.|.+. |+-++.++++
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii 111 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLI 111 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHH
Confidence 455666677777888887777666443344555554478999999999999999999999999999985 7777888999
Q ss_pred HHHHHHHH-Hh---hh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh
Q 008603 83 YFIGGLVM-LW---SP-NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (560)
Q Consensus 83 ~ai~~il~-~~---a~-s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~ 157 (560)
.+++.++. ++ .+ ..+.++++|++.|+|.|.. +..-.|+++-...+.|.++++.......+|..+|+.+......
T Consensus 112 ~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~ 190 (488)
T KOG2325|consen 112 AIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNF-AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTP 190 (488)
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhh
Confidence 99999888 33 23 5789999999999998877 7788999999999999999999988888888888777665543
Q ss_pred ccccc-----------hhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 158 MTAPS-----------WRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 158 ~~~~~-----------Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
....| +-..-|+.++..++.+++..++++|.++-
T Consensus 191 Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 191 LGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred hcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccC
Confidence 32222 23455788888888888888889998654
No 147
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.93 E-value=7.3e-08 Score=107.23 Aligned_cols=152 Identities=18% Similarity=0.167 Sum_probs=130.2
Q ss_pred HHHHHHHH-HHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 008603 25 IAGAVLYI-KREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLAR 103 (560)
Q Consensus 25 ~~~~lp~i-~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R 103 (560)
+..++|.+ ++.+|. ++...|++.+++.+|++++.++.+.+.+++++++.+..+.++++++.+.++++++.+..++.-
T Consensus 237 ~~aLlPl~a~~~l~~--~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l 314 (524)
T PF05977_consen 237 VWALLPLFARDVLGG--GASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIAL 314 (524)
T ss_pred HHHhhhHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 33456754 567888 789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
++.|++.....+...+.+.+..|++.||+.++++++....++.+|.++ ...+.+..+.+..+.+.++..++..++
T Consensus 315 ~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll--~G~la~~~g~~~al~~a~~~lll~~~~ 389 (524)
T PF05977_consen 315 FLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLL--WGFLADHFGVRTALLIAGAALLLSALI 389 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998888888543 345556678888887777655554443
No 148
>TIGR00898 2A0119 cation transport protein.
Probab=98.93 E-value=3.9e-08 Score=108.08 Aligned_cols=134 Identities=24% Similarity=0.264 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhH--HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 008603 50 AMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNV--YVLLLARLLDGFGIGLAVTLVPIYISETAPP 127 (560)
Q Consensus 50 s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~--~~lii~R~l~G~g~G~~~~~~~~~isE~~p~ 127 (560)
....+..+++.++.++++||+|||+.+.++.++.+++.+++.+.++. +..++.-++.+++.+...+..+.+.+|.+|+
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456677888999999999999999999999988888877776543 4555566777777777788889999999999
Q ss_pred cchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 128 ~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
+.|++++++.+....+|.++++.+.. . ...++...+++.++..++..++ .+++||+
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~-~---~~~~~~~~~~~~~~~~~~~~~~-~~~lpet 497 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVY-L---GEKWLFLPLVLFGGLALLAGIL-TLFLPET 497 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHH-H---HHHHHhhHHHHHHHHHHHHHHH-HHcCcCC
Confidence 99999999999999999999876654 2 2335666777777777776554 4567887
No 149
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.92 E-value=3.7e-08 Score=104.48 Aligned_cols=174 Identities=18% Similarity=0.147 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh--CCh-HHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL--GRR-PMLIVSSVL 82 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~--GRR-~~lli~~ll 82 (560)
.++.+++++++....+..+.--.| |+.+..|. +....++..+.+=++.+.|+++.|+++||+ ||| ++-++.+++
T Consensus 253 ~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~--s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 253 LIWLLALANVFVYVVRYGINDWGPLYLSEVKGF--SLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCC--CHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 345678888888888888877666 56777788 779999999999999999999999999996 777 555555555
Q ss_pred HHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHH-HHHHHHHHHHHHHhcc
Q 008603 83 YFIGGLVMLWSP--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYCMVFGMSLMT 159 (560)
Q Consensus 83 ~ai~~il~~~a~--s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~l-G~~lg~li~~~l~~~~ 159 (560)
..++.+.+-+++ |+++..++-+++|+..-+..-.+-....|..|++--|++.|+.+.+..+ |..++..+. ....+
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~--g~i~d 408 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPL--GYIAD 408 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcc--eeeEe
Confidence 555555555555 4588888889999988777777777889999999999999999999888 776663333 33445
Q ss_pred ccchhHHHHHHHHHHHHHHHhhhee
Q 008603 160 APSWRLMLGVLFIPSLIYFVLTIFY 184 (560)
Q Consensus 160 ~~~Wr~~f~i~ai~~ll~~il~~~~ 184 (560)
..+|...|.+..+.+++..++...+
T Consensus 409 ~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 409 TWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred cCCCcchHHHHHHHHHHHHHHHHHH
Confidence 5799999988888877766554433
No 150
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.91 E-value=8.9e-08 Score=102.82 Aligned_cols=115 Identities=19% Similarity=0.325 Sum_probs=95.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-PNVYVLLLARLLDGFGIGLAVTLVPI 119 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a-~s~~~lii~R~l~G~g~G~~~~~~~~ 119 (560)
++...+++.....++.+++.++.++++||+|||+.+.++.++.+++.+++.+. ++.+.+++..++.|++.+...+..++
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567777888889999999999999999999999999988888887777665 45667777888999999999888999
Q ss_pred HHHhhcC-------CcchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 120 YISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 120 ~isE~~p-------~~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
+++|..+ ++.+|...++.+....+|..+++.+...+
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998865 56679999999999999988886655443
No 151
>PRK09669 putative symporter YagG; Provisional
Probab=98.91 E-value=4.1e-08 Score=106.53 Aligned_cols=161 Identities=14% Similarity=0.186 Sum_probs=120.7
Q ss_pred HHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCC-hHHHHHHHHHHHHHHHHHHhhhh-----
Q 008603 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLYFIGGLVMLWSPN----- 95 (560)
Q Consensus 26 ~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr----~GR-R~~lli~~ll~ai~~il~~~a~s----- 95 (560)
..+.+++.+++|+ ++...|.+..+..+...+..|+.|.++|| +|| |+.++++.+..+++.+++.+.++
T Consensus 30 ~~l~~~~t~~~gl--s~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~ 107 (444)
T PRK09669 30 LFLAYFYTDVFGL--SAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATG 107 (444)
T ss_pred HHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcch
Confidence 3356678889999 88999999999999999999999999998 786 57777787777777766555543
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcchhhHhhHHHHHHHHHHHHHHHHHHHHH--hc---cccchhHHHH
Q 008603 96 -VYVLLLARLLDGFGIGLAVTLVPIYISETA-PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS--LM---TAPSWRLMLG 168 (560)
Q Consensus 96 -~~~lii~R~l~G~g~G~~~~~~~~~isE~~-p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~--~~---~~~~Wr~~f~ 168 (560)
+..+++..++.+.+......+..++.+|+. ++++|.+.+++......+|..++..+...+. .. ...+|+..+.
T Consensus 108 ~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~ 187 (444)
T PRK09669 108 KIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMM 187 (444)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHH
Confidence 455556666667766667677778999998 5588999999988888888777754432221 11 1347998888
Q ss_pred HHHHHHHHHHHhhheeccCC
Q 008603 169 VLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 169 i~ai~~ll~~il~~~~lpEs 188 (560)
+.+++.++..++.++..+|.
T Consensus 188 i~~ii~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 188 VMGLLGVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHHHHHHhCCeEEe
Confidence 88888877766666666664
No 152
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.91 E-value=2.7e-07 Score=99.51 Aligned_cols=174 Identities=19% Similarity=0.216 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHHHHHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G-RR~~lli~~ll~ai~~il 89 (560)
++.-+|+++...++..|.++.+-++.|+ ++.++|++.++..+..+++.++.|.++||.+ +|+.+.++.++.++..+.
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~--s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~ 84 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGF--SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL 84 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 4555667777778888888888899999 8899999999999999999999999999986 567887877777777777
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHH--HhccccchhHHH
Q 008603 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM--SLMTAPSWRLML 167 (560)
Q Consensus 90 ~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l--~~~~~~~Wr~~f 167 (560)
..+.++++.+++.-++..+......+...++..+... .++.-.+-.-.++++|-.++.+..... ...+.......+
T Consensus 85 ~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~ 162 (400)
T PF03825_consen 85 LAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIF 162 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHH
Confidence 7778888888888888887777666777777776665 345566677788888887764431111 111122233455
Q ss_pred HHHHHHHHHHHHhhheeccCCh
Q 008603 168 GVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 168 ~i~ai~~ll~~il~~~~lpEsP 189 (560)
++.++.+++.... .+.+|+.|
T Consensus 163 ~i~~~~~~ll~~~-~l~lp~~~ 183 (400)
T PF03825_consen 163 YIAAILSLLLAGF-ALFLPKTP 183 (400)
T ss_pred HHHHHHHHHHHHH-HHhCCCCc
Confidence 6666555544332 34567776
No 153
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.91 E-value=4.9e-08 Score=107.27 Aligned_cols=146 Identities=14% Similarity=0.048 Sum_probs=103.6
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh-------HHHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q 008603 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR-------PMLIVSSVLYFIGGLVMLWSPNVYVLLLA 102 (560)
Q Consensus 30 p~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR-------~~lli~~ll~ai~~il~~~a~s~~~lii~ 102 (560)
+++.+++|+ +....+.+.+...++.++++++.|+++||+||| ..+.+..++.++..++..+.++.+..++.
T Consensus 277 ~~l~~~~g~--s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 354 (476)
T PLN00028 277 EYFYDRFGL--SLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVV 354 (476)
T ss_pred HHHHHhcCC--CHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 456777899 778999999999999999999999999999865 23333333333334444455566655556
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhh
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~ 181 (560)
-++.+++.+........++.++. ++.||...++.+....+|..+++.+. ......+|+..|++.+++.++..++.
T Consensus 355 ~~l~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~g~lg~~i~~~l~---~~~~~~~y~~~f~~~~~~~~i~~~~~ 429 (476)
T PLN00028 355 MILFSIFVQAACGATFGIVPFVS-RRSLGVISGLTGAGGNVGAVLTQLLF---FTGSSYSTETGISLMGVMIIACTLPV 429 (476)
T ss_pred HHHHHHHHHHhhhhhcccCcccC-hhhchhhhhhhhccccHHHHHHHHHH---HhcCCccHhhHHHHHHHHHHHHHHHH
Confidence 66677776666566666777765 47899999998888888887775432 12234579999999888887765543
No 154
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.90 E-value=2e-07 Score=98.92 Aligned_cols=145 Identities=12% Similarity=0.035 Sum_probs=113.4
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 008603 28 AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDG 107 (560)
Q Consensus 28 ~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G 107 (560)
..|.+.++.|. +....|.+.+...++.++..++.|++.||+|+|+.+.++.++.+++.+++.++++.+.+++..++.|
T Consensus 227 ~~~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 304 (382)
T PRK11128 227 FSAIYWQAAGY--SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHC 304 (382)
T ss_pred HHHHHHHHCCC--CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 34444467888 7788899999888999999999999999999999999999998888888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCcchhhHhhHHH-HHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHH
Q 008603 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQ-FTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYF 178 (560)
Q Consensus 108 ~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~-~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~ 178 (560)
++.+...+....++.+. +++++++..++.+ ....+|..+++.+. ....+..++ ..|++.++++++..
T Consensus 305 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~--G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 305 GTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLS--GFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhccH-HHHHHHHHHHHHHH
Confidence 99999888888888887 5566788888775 44566667775444 444455566 45666666665543
No 155
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.87 E-value=2.7e-07 Score=102.01 Aligned_cols=153 Identities=12% Similarity=0.122 Sum_probs=114.0
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHH-HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHH
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVA-MSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM---LWS-PNVYVLLL 101 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s-~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~---~~a-~s~~~lii 101 (560)
...|++.+++|+ ++.+.+++.. ...++.+++.++.|+++||+|||+.+.++.++.+++.+++ +.. ++.+.+.+
T Consensus 244 ~~~~~l~~~~G~--s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~ 321 (491)
T PRK11010 244 LTTTFLIRGVGF--DAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGA 321 (491)
T ss_pred HHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH
Confidence 345666778899 7899999874 5568999999999999999999988877666555544332 232 35555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhh
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~ 181 (560)
.-++..++.|...+...+++.+..+++.+++..++.+...++|..+++.+ .....+..+|+..|.+.++++++..++.
T Consensus 322 ~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~--~G~l~~~~G~~~~f~~~~~~~l~~l~~~ 399 (491)
T PRK11010 322 AVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPV--AGWFVEAHGWPTFYLFSVAAAVPGLLLL 399 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 66676666676667778889999999999999999998888887766443 3344456689999998888888876554
Q ss_pred he
Q 008603 182 IF 183 (560)
Q Consensus 182 ~~ 183 (560)
.+
T Consensus 400 ~~ 401 (491)
T PRK11010 400 LV 401 (491)
T ss_pred HH
Confidence 43
No 156
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.85 E-value=8e-08 Score=104.08 Aligned_cols=160 Identities=18% Similarity=0.120 Sum_probs=104.2
Q ss_pred HHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH---HHHHHHHHh--hhhHHH
Q 008603 25 IAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY---FIGGLVMLW--SPNVYV 98 (560)
Q Consensus 25 ~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~---ai~~il~~~--a~s~~~ 98 (560)
....+| ++++..|. ++...+++.....++.++++++.|+++||+++++....+..+. .++.+++.. ..+.+.
T Consensus 270 ~~~~~p~~l~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (438)
T TIGR00712 270 VLDWSPTYLKEVKHF--ALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLV 347 (438)
T ss_pred HHHhHHHHHHHccCC--ChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHH
Confidence 334455 45555788 7788899999999999999999999999996543222222221 122222222 123344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHH-HHHHHHHHHHHHhccccchhHHHHHHHHHHHHH
Q 008603 99 LLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVG-MFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIY 177 (560)
Q Consensus 99 lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG-~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~ 177 (560)
..+..++.|++...........+.|.+|++.|++++++.+....+| ..+++.+. ....+..+|...|++..+..++.
T Consensus 348 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~--G~l~~~~g~~~~~~~~~~~~~~~ 425 (438)
T TIGR00712 348 DMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIV--GYTVDFFGWDGGFMVMIGGSILA 425 (438)
T ss_pred HHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhH--HHHHHhccchHHHHHHHHHHHHH
Confidence 4444455555433322333356789999999999999998887766 45664433 34445568999998888888887
Q ss_pred HHhhheeccCC
Q 008603 178 FVLTIFYLPES 188 (560)
Q Consensus 178 ~il~~~~lpEs 188 (560)
.++.++++||.
T Consensus 426 ~~~~~~~~~~~ 436 (438)
T TIGR00712 426 VILLIVVMIGE 436 (438)
T ss_pred HHHHHHHHhhc
Confidence 77777777775
No 157
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.85 E-value=1.3e-07 Score=98.99 Aligned_cols=118 Identities=14% Similarity=0.180 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHH-HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--------
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSL-IGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-------- 93 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~-lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a-------- 93 (560)
.......|.+.+++|. ++.+.+.+..+.. ++.+++.+++|+++||+|||+.+.++.++.+++..+..+.
T Consensus 226 ~~~~~~~~~~l~~~g~--~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (356)
T TIGR00901 226 SAATVLTTLFLLDMGF--SKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDG 303 (356)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 3344445555555888 7788888877655 6788999999999999999999988888887776655543
Q ss_pred ---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHH
Q 008603 94 ---PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGC 142 (560)
Q Consensus 94 ---~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~ 142 (560)
++.+.++++.++.+++.+...+...+++.|.+|+++||+..++.+...+
T Consensus 304 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 304 ITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4557778888999999999999999999999999999999998776543
No 158
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.84 E-value=4.1e-07 Score=96.66 Aligned_cols=149 Identities=11% Similarity=-0.040 Sum_probs=107.9
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHH-HHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh------hhhHHHHH
Q 008603 28 AVLYIKREFHLETEPTIEGLIVAMSL-IGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW------SPNVYVLL 100 (560)
Q Consensus 28 ~lp~i~~~~gls~s~~~~gli~s~~~-lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~------a~s~~~li 100 (560)
..+.+.+|.|. ++++.|++..... +..+++.++.|++.||+|+|+.+.++.++.++..+.... .++...+.
T Consensus 230 ~~~~~l~~~G~--s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (390)
T TIGR02718 230 LSKLYLVDAGW--PLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAW 307 (390)
T ss_pred HhhHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHH
Confidence 34444456899 7899999888775 466778999999999999999988877665333322221 12333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC-cchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p~-~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
...++.+++.+...+....++.+..++ +.+++..++.+...++|..+++.+. ....+..+++..|.+.+++.++..+
T Consensus 308 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~--G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 308 SCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIA--GYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHccHHHHHHHHHHHHHHHH
Confidence 555566777777777778887777776 8899999999999999999996554 4444566888899888877776544
Q ss_pred h
Q 008603 180 L 180 (560)
Q Consensus 180 l 180 (560)
+
T Consensus 386 ~ 386 (390)
T TIGR02718 386 L 386 (390)
T ss_pred H
Confidence 3
No 159
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.83 E-value=5e-07 Score=96.44 Aligned_cols=149 Identities=12% Similarity=0.020 Sum_probs=108.9
Q ss_pred HHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-----hhHHHHHH
Q 008603 28 AVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-----PNVYVLLL 101 (560)
Q Consensus 28 ~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a-----~s~~~lii 101 (560)
..| ++.++++. ++.+.++......++.+++.++.|+++||++||+.+.++.++.+++.++..+. .+.+.+++
T Consensus 237 ~~p~~~~~~~g~--~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 314 (406)
T PRK15402 237 LSPVILISGEQL--SSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTA 314 (406)
T ss_pred HhHHHHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHH
Confidence 344 45677888 77888888888888899999999999999999999998888877777766553 35666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhh
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~ 181 (560)
.-++.|++.+...+....... ..++++||+..+..+....+|..+++.+. ....+..++....+...+..++..++.
T Consensus 315 ~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~g~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK15402 315 GLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGMLSMLIFTVGIELS--KHAYLGGGNGLFNLFNLANGLLWLLLV 391 (406)
T ss_pred HHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHHHHHHHHHHHHHH--HhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 888999999887666555543 34558999999999999989988884443 334455555555445444444443433
No 160
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.81 E-value=2.7e-07 Score=98.03 Aligned_cols=179 Identities=21% Similarity=0.214 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH
Q 008603 5 ALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF 84 (560)
Q Consensus 5 ~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a 84 (560)
.+..+.++-..+..+. ++.++....+-+.++|+ +..+..++.....+.+++++++.|+|.||+|.|+++.++.++..
T Consensus 253 ~i~~FLiA~~~~~DGv-~til~~~~~fg~~~~gl--s~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~ 329 (438)
T COG2270 253 NLVLFLIARFFYIDGV-NTILAMGGVFGAADLGL--SSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILS 329 (438)
T ss_pred chHHHHHHHHHHHhhH-HHHHHHHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHH
Confidence 3444455555555655 33334444566779999 77999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchh
Q 008603 85 IGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWR 164 (560)
Q Consensus 85 i~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr 164 (560)
+.++...+...-..+.++-++.|++.|...+.+-.|.++++|+++-++.+++++..+..+.+++++......... .+-|
T Consensus 330 ~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iT-g~~r 408 (438)
T COG2270 330 IAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQIT-GSSR 408 (438)
T ss_pred HHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHh-cchh
Confidence 888877777777777788899999999999999999999999999999999999999999999977664443322 2467
Q ss_pred HHHHHHHHHHHHHHHhhheeccCC
Q 008603 165 LMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 165 ~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
..+....++-++.++ .++.+|+.
T Consensus 409 ~g~~~i~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 409 AGVLSIIVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred hHHHHHHHHHHhhHh-hEEeecCC
Confidence 766666666555444 35566653
No 161
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.80 E-value=1.6e-07 Score=101.10 Aligned_cols=162 Identities=15% Similarity=0.074 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH-HHHHHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM-LIVSSVLYFIGGLV 89 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~-lli~~ll~ai~~il 89 (560)
..+.+++.......+...+|.+.++++...+..+.+...+...++.+++.++.|+++||++||+. +.+..++.+++.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~ 326 (412)
T TIGR02332 247 YTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL 326 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH
Confidence 34444444454555666777777765322266788999999999999999999999999997764 44444444443332
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcccc-chhHHHH
Q 008603 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP-SWRLMLG 168 (560)
Q Consensus 90 ~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~-~Wr~~f~ 168 (560)
.....+....+++-++.+++.....+.......|.+|++.|++++++.+...++|..+++.+. ....+.. +|+..|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~--g~i~~~~g~~~~~~~ 404 (412)
T TIGR02332 327 ASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLI--GILKDATGSFNSGLW 404 (412)
T ss_pred HHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhc--ccccccCCCCchhHH
Confidence 222222222222222223333223333445557889999999999999999999999986544 2333434 5998887
Q ss_pred HHHHHH
Q 008603 169 VLFIPS 174 (560)
Q Consensus 169 i~ai~~ 174 (560)
+.++..
T Consensus 405 ~~~~~~ 410 (412)
T TIGR02332 405 FVAALL 410 (412)
T ss_pred HHHHHH
Confidence 766643
No 162
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.78 E-value=4.7e-07 Score=91.32 Aligned_cols=161 Identities=15% Similarity=0.151 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-------
Q 008603 21 DNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS------- 93 (560)
Q Consensus 21 ~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a------- 93 (560)
.....+...|.+++.+|+ +.++...+..+..+|..++ ++.|.+.|++|++.+++++.+...++..++..+
T Consensus 17 t~Y~Fs~yS~~Lk~~l~~--sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLKSRLGY--SQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cccchhhhhHHHHHHhCC--CHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 355666778999999999 8899999999999998775 889999999999999999999999998877552
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Q 008603 94 PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIP 173 (560)
Q Consensus 94 ~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~ 173 (560)
++++.+++..++.|.+.+.+.+.+.......|| +.||++.++.-....++..+-..+....+. ...-...+++...+
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~--~~~~~fll~la~~~ 170 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG--DDPSSFLLFLAVLP 170 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC--CChHHHHHHHHHHH
Confidence 467888888888888888777887777888998 579999999988877777664333333322 22233444444444
Q ss_pred HHHHHHhhheeccCC
Q 008603 174 SLIYFVLTIFYLPES 188 (560)
Q Consensus 174 ~ll~~il~~~~lpEs 188 (560)
.++.++. .++++..
T Consensus 171 ~~v~l~~-~~~vr~~ 184 (250)
T PF06813_consen 171 AVVCLVA-MFFVRPV 184 (250)
T ss_pred HHHHHHH-hhheecc
Confidence 4444333 3444433
No 163
>PRK10054 putative transporter; Provisional
Probab=98.77 E-value=3.1e-07 Score=98.35 Aligned_cols=146 Identities=12% Similarity=0.177 Sum_probs=113.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-PNVYVLLLARLLDGFGIGLAVTLVPI 119 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a-~s~~~lii~R~l~G~g~G~~~~~~~~ 119 (560)
+....+++.+...+..+...++.|.+.||+++|+.+.+++++.+++.++..++ ++.+.+++..++.|++.+...+....
T Consensus 242 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 242 AEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 55677777777777777778899999999999999999988888887777664 57777778889999999888888888
Q ss_pred HHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 120 YISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 120 ~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
++.+..|++.|++..+..+ ...+|..+++... ....+..+....|.+.++..++..++...-.+|.|
T Consensus 322 ~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~--G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQS-LGWLGAAINPLVS--GVILTTLPPWSLFVILALAIVAAWLLMLKGMRARP 388 (395)
T ss_pred HHHHhCCcccceehHhHHH-HHHHHHHHHHHHH--HHHHHHcChhhHHHHHHHHHHHHHHHHHhccccCc
Confidence 9999999999999887654 4557888885544 44455667778888877777776666555555544
No 164
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.76 E-value=5e-07 Score=98.24 Aligned_cols=134 Identities=16% Similarity=0.233 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh---
Q 008603 17 LQGWDNATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW--- 92 (560)
Q Consensus 17 l~g~~~~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~--- 92 (560)
+.++........+|. +++.+|. ++.+.+++.....++.+++.++.|++.||+|||+.+.++.++.+++.+++.+
T Consensus 266 ~~~~~~~~~~~~~p~~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (485)
T TIGR00711 266 LLGLGLYGSFYLLPLYLQQVLGY--TALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT 343 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC
Confidence 333333334445564 5556788 7899999999999999999999999999999999999999888888877763
Q ss_pred -hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 93 -SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 93 -a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
..+.+.+++..++.|++.+...+.....+.+..|+++|+.++++.+....+|..+++.+.
T Consensus 344 ~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 344 PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 234566777788999999988877788888999999999999999999999999885544
No 165
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.76 E-value=2.6e-07 Score=95.84 Aligned_cols=151 Identities=20% Similarity=0.151 Sum_probs=101.6
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHH-HHH-HHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLI-VSS-VLYFIGGL 88 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G-RR~~ll-i~~-ll~ai~~i 88 (560)
+..++............| ++.+.++. ++.+.+++.+...++.+++.++.|+++||+. ||+..+ ... .+..++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~ 300 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGF--SKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLL 300 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHH
Confidence 333333333333444444 55677888 7789999999999999999999999999864 333222 222 22222222
Q ss_pred HHHh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHH
Q 008603 89 VMLW--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLM 166 (560)
Q Consensus 89 l~~~--a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~ 166 (560)
+... ..+...+++..++.|+......+....+++|.+|++.|+++.++.+....+|..+++.+. ....+..+|+..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~--g~l~~~~g~~~~ 378 (379)
T TIGR00881 301 VYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPL--GYLADGFGWAGA 378 (379)
T ss_pred HHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhH--HHHHHhhccccc
Confidence 2222 235556666777788766666666778899999999999999999999999999885544 344456677764
Q ss_pred H
Q 008603 167 L 167 (560)
Q Consensus 167 f 167 (560)
|
T Consensus 379 f 379 (379)
T TIGR00881 379 F 379 (379)
T ss_pred C
Confidence 3
No 166
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.75 E-value=1e-06 Score=86.34 Aligned_cols=164 Identities=26% Similarity=0.420 Sum_probs=126.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEP--TIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~--~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il 89 (560)
....+...++........+.+..+++. +. ...+++.+...++..++.++.|.++||+|||+.+..+.....++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~ 85 (338)
T COG0477 8 ALAALLLGLDLGLLSPALPLLLSTLSL--SSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLL 85 (338)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHcCC--CchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHH
Confidence 344445556666667778888888876 44 47899999999999999999999999999998888887766666666
Q ss_pred HHhhhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cchhhHhhHHHH-HHHHHHHHHHHHHHHHHhccccchhH
Q 008603 90 MLWSPN--VYVLLLARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 90 ~~~a~s--~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~-~~RG~~~~l~~~-~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
..+..+ .+.+++.|++.|++.+...+....+++|.+|. +.|+...+.... ...+|..+++............+||.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T COG0477 86 LALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRA 165 (338)
T ss_pred HHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH
Confidence 666665 89999999999999999999999999999998 678888888777 57777777764433322224568999
Q ss_pred HHHHHHHHHHHH
Q 008603 166 MLGVLFIPSLIY 177 (560)
Q Consensus 166 ~f~i~ai~~ll~ 177 (560)
.|.+........
T Consensus 166 ~~~~~~~~~~~~ 177 (338)
T COG0477 166 AFLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHHH
Confidence 777766666443
No 167
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.75 E-value=2.8e-07 Score=111.60 Aligned_cols=147 Identities=12% Similarity=0.066 Sum_probs=113.3
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh---------------
Q 008603 29 VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--------------- 93 (560)
Q Consensus 29 lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a--------------- 93 (560)
.+++.+.+|. ++...|++.+.+.+|.+++.++.|+++++.++++.+.++.++.+++.+.+.+.
T Consensus 249 p~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 326 (1140)
T PRK06814 249 PLLAKETLGG--DENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSIL 326 (1140)
T ss_pred HHHHHHHcCC--chHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchh
Confidence 3456667898 77999999999999999999999999998887776666655555555444432
Q ss_pred -----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 94 -----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 94 -----~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
++.+.+++..++.|++.+...+..++++.+.+|++.||+++++.++...+|+.+++++...+.. ...++...|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~-~~~~~~~~~~ 405 (1140)
T PRK06814 327 VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA-LGFSIPWIIL 405 (1140)
T ss_pred hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHH
Confidence 6777788889999999999999999999999999999999999999999999988766544331 2335566665
Q ss_pred HHHHHHHHHH
Q 008603 169 VLFIPSLIYF 178 (560)
Q Consensus 169 i~ai~~ll~~ 178 (560)
+.+++.++..
T Consensus 406 ~~~~~~~~~~ 415 (1140)
T PRK06814 406 FIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHH
Confidence 5555444433
No 168
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=7.4e-08 Score=100.27 Aligned_cols=182 Identities=14% Similarity=0.067 Sum_probs=119.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC----------------ChHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLET----------------EPTIEGLIVAMSLIGATCITTCSGA 65 (560)
Q Consensus 2 ~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~----------------s~~~~gli~s~~~lG~iig~~~~G~ 65 (560)
+|..+..+.+++++-...|.......-+-...+..++.+ +..+.-- .-+..+.-+-|.++.+.
T Consensus 325 rkttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrd-llitslaefPGlLIt~~ 403 (528)
T KOG0253|consen 325 RKTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRD-LLITSLAEFPGLLITGV 403 (528)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHH-HHHHHHhhCCchhHHHH
Confidence 466677788888887777765554443333333222210 0111111 12233455678899999
Q ss_pred HHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHH
Q 008603 66 IADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGM 145 (560)
Q Consensus 66 LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~ 145 (560)
+.||+|||+.+..+.+++.++.++...+.+-..+.+.-|..-++..+.+.+.++|..|++|+..|++..|....+..+|.
T Consensus 404 iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIgg 483 (528)
T KOG0253|consen 404 IVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGG 483 (528)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhh
Confidence 99999999999999999999888877654332222222333333444556778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 146 FLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 146 ~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
++++++. +.. ...-....++.+.+.++..+.+.|+--|+
T Consensus 484 I~~p~iA--~~~--e~s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 484 IFSPVIA--MRA--ELSTSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred hhhhHHH--HHh--ccceeehHHHHHHHHHHHHHHheeeeecc
Confidence 9997776 222 22233455667777777666655554466
No 169
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.75 E-value=1.7e-06 Score=92.62 Aligned_cols=147 Identities=10% Similarity=-0.065 Sum_probs=110.2
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 008603 28 AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDG 107 (560)
Q Consensus 28 ~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G 107 (560)
..|.+.+++|+ ++...+++.....++.+++.++.+++.||.+|+..+....+..+...++..+.++.+.+.+..++.|
T Consensus 239 ~~p~~~~~~g~--s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G 316 (394)
T PRK10213 239 IRPVYMNLAGF--GVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWG 316 (394)
T ss_pred HHHHHHHhcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 35777788898 7788999999999999999999999999965444344333334444455456667778888889999
Q ss_pred HHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 108 ~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
++.+...+..+.++.+..| +++++..++.....++|..+++.+. ....+..+++..+...++..++..+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~--G~l~~~~g~~~~~~~~~~~~~~~~~ 385 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIG--GYALDNIGLTSPLMLSGTLMLLTAL 385 (394)
T ss_pred HHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHH--HHHHhccChhhHHHHHHHHHHHHHH
Confidence 9999998989989999887 5566777777778888888885554 4445667888888887766555443
No 170
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.74 E-value=6.7e-07 Score=95.36 Aligned_cols=156 Identities=17% Similarity=0.135 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-hhhHHHHH
Q 008603 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-SPNVYVLL 100 (560)
Q Consensus 22 ~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~-a~s~~~li 100 (560)
+..++.+-|++.+..|+ +.+..+++...+.++.++|+.+.|+++|| +.|+.+.....+.++..+...+ .++.+..+
T Consensus 228 F~~ftYi~P~L~~v~g~--s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~ 304 (394)
T COG2814 228 FALYTYIRPFLESVAGF--SVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALAL 304 (394)
T ss_pred hhhHHhHHHHHHHccCC--CHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHH
Confidence 45566678899999999 78999999999999999999999999999 9999988887777777766655 45566666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
+.-++.|+............+++ .-++.+..+.++....+++|..+|..++ ....+..++....++.+++.++.+++
T Consensus 305 ~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lG--G~v~~~~g~~~~~~~~a~l~~~a~~~ 381 (394)
T COG2814 305 ALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALG--GLVLDALGYAATGWVGAALLLLALLL 381 (394)
T ss_pred HHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHH--HHHHHhhchHHHHHHHHHHHHHHHHH
Confidence 67777888777776666666677 5578899999999999999999995544 55556689999999999998887766
Q ss_pred hhe
Q 008603 181 TIF 183 (560)
Q Consensus 181 ~~~ 183 (560)
.++
T Consensus 382 ~~~ 384 (394)
T COG2814 382 ALL 384 (394)
T ss_pred HHH
Confidence 543
No 171
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=98.73 E-value=1.2e-06 Score=96.57 Aligned_cols=149 Identities=19% Similarity=0.310 Sum_probs=117.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh-HHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 42 PTIEGLIVAMSLIGATCITTCSGAIADWLGRR-PMLIVSSVLYFIGGLVMLWS--PNVYVLLLARLLDGFGIGLAVTLVP 118 (560)
Q Consensus 42 ~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR-~~lli~~ll~ai~~il~~~a--~s~~~lii~R~l~G~g~G~~~~~~~ 118 (560)
.+..++..++..+-..+..|+.|.++|+-|+| +.+.+..++.+++++++.+. .+++...+.-++.-++.+...+...
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567888899999999999999999999855 56666666677777777774 3455555556666678888888899
Q ss_pred HHHHhhcCCcch--------------------------hhHhhHHHHHHHHHHHHHHHHHHHHHhccc------cchhHH
Q 008603 119 IYISETAPPEIR--------------------------GLLNTLPQFTGCVGMFLAYCMVFGMSLMTA------PSWRLM 166 (560)
Q Consensus 119 ~~isE~~p~~~R--------------------------G~~~~l~~~~~~lG~~lg~li~~~l~~~~~------~~Wr~~ 166 (560)
+++.|+.+++.+ ++.++.-...+++|.++..++...+..... .+-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 999999999998 999999999999999988777666543322 246889
Q ss_pred HHHHHHHHHHHHHhhheeccCChh
Q 008603 167 LGVLFIPSLIYFVLTIFYLPESPR 190 (560)
Q Consensus 167 f~i~ai~~ll~~il~~~~lpEsP~ 190 (560)
+.+.++.-++..+...+++||.|+
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~ 252 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPG 252 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCC
Confidence 999999988888887888898865
No 172
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.71 E-value=2e-06 Score=90.13 Aligned_cols=119 Identities=16% Similarity=0.274 Sum_probs=94.0
Q ss_pred HH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHH
Q 008603 29 VL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS-----PNVYVLLLA 102 (560)
Q Consensus 29 lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a-----~s~~~lii~ 102 (560)
.| ++.++++. ++.+.+++.+...++.+++.++.|++.||+|||+.+..+.++..++.+++.+. ++...+++.
T Consensus 229 ~~~~~~~~~g~--~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (385)
T TIGR00710 229 APFVYIDIMGV--SPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGP 306 (385)
T ss_pred ChHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 44 45567888 77999999999999999999999999999999999988887777776666543 234555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHH-HHHHHHH
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCV-GMFLAYC 150 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~l-G~~lg~l 150 (560)
.++.|++.+...+....+..|..| ++|++.+++.+..... |.+.++.
T Consensus 307 ~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~ 354 (385)
T TIGR00710 307 MMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL 354 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 778899999888888889899887 6789999988776544 5555543
No 173
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.71 E-value=5.9e-07 Score=97.85 Aligned_cols=173 Identities=13% Similarity=0.185 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHH--------HHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPM--------LIVSS 80 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~--------lli~~ 80 (560)
...+..+...+........+| ++.+.+|. +..+.++..+...++.+++.++.|+++||+++|+. +..+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~--s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 342 (465)
T TIGR00894 265 AIWFAIFGHFWLYTILPTYLPTFISWVLRV--SGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGI 342 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--ChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 344445555554555555566 55677898 77899999999999999999999999999864421 11111
Q ss_pred HHH--HHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh
Q 008603 81 VLY--FIGGLVMLW-SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL 157 (560)
Q Consensus 81 ll~--ai~~il~~~-a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~ 157 (560)
.+. ++..++... ..+....+++-++.+.+.+...+.......|..|. .+|.++++.+..+.+|.++++.+......
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~ 421 (465)
T TIGR00894 343 GGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILS 421 (465)
T ss_pred HHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeC
Confidence 111 111111122 23444444444555555554444444455566665 89999999999999999888655432221
Q ss_pred cc-ccchhHHHHHHHHHHHHHHHhhheec
Q 008603 158 MT-APSWRLMLGVLFIPSLIYFVLTIFYL 185 (560)
Q Consensus 158 ~~-~~~Wr~~f~i~ai~~ll~~il~~~~l 185 (560)
.+ ...|+..|.+.++..++..++..++.
T Consensus 422 ~~~~~~~~~~f~~~~~~~~i~~i~~~~~~ 450 (465)
T TIGR00894 422 QDSKNVWLIVFLIMAFVNILCVIFYLIFG 450 (465)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHeeeee
Confidence 11 13599999999888888766544443
No 174
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.71 E-value=8.7e-07 Score=97.80 Aligned_cols=124 Identities=15% Similarity=0.126 Sum_probs=105.2
Q ss_pred HHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh---hhHHHHHHH
Q 008603 27 GAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS---PNVYVLLLA 102 (560)
Q Consensus 27 ~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a---~s~~~lii~ 102 (560)
..+| +++..+|. ++.+.|+......++..++.++.|+++||+|||+.+..+.++.+++.+++.+. ++.+...+.
T Consensus 280 ~~~~~~lq~v~g~--s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~ 357 (495)
T PRK14995 280 LLMAQELQFVHGL--SPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGL 357 (495)
T ss_pred HHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHH
Confidence 3444 56667898 88999999999999999999999999999999999998888887777665432 355666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 103 RLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
.++.|++.|...+.....+.+..|+++++.+.++.+....+|..++..+.
T Consensus 358 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~ 407 (495)
T PRK14995 358 MALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIF 407 (495)
T ss_pred HHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999888889999999999999999999999999999885444
No 175
>PRK09848 glucuronide transporter; Provisional
Probab=98.70 E-value=8.4e-07 Score=96.35 Aligned_cols=129 Identities=14% Similarity=0.201 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh----CChH-HHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL----GRRP-MLIVSSVLYFIG 86 (560)
Q Consensus 13 l~~fl~g~~~~~~~~-~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~----GRR~-~lli~~ll~ai~ 86 (560)
++.+..........+ +.+++.+.+|+ ++.+.|++..+..+..++..++.|.++||. |||+ .++++.+...+.
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl--~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~ 92 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGV--GAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIF 92 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHH
Confidence 344343333333333 44578888899 889999999999999999999999999986 7665 446666555544
Q ss_pred HHHHHhhh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cchhhHhhHHHHHHHH
Q 008603 87 GLVMLWSP-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQFTGCV 143 (560)
Q Consensus 87 ~il~~~a~-------s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~-~~RG~~~~l~~~~~~l 143 (560)
.+++...+ ....+++..++.+++.+...+...++..|+.+. ++|.+.+++-....++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~ 157 (448)
T PRK09848 93 SVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASL 157 (448)
T ss_pred HHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHH
Confidence 44432211 123344455677888888877777777887755 6788877766554343
No 176
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.69 E-value=3.1e-07 Score=97.42 Aligned_cols=170 Identities=18% Similarity=0.101 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~ 87 (560)
+.+++-++..+=..-.++..+| +++++|++ ++.+.|.+...+.+...+.++++|+++||+|.++++.+...+++++.
T Consensus 221 W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~--~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~ 298 (417)
T COG2223 221 WLLSLLYFATFGGFVGFSAYLPMYLVTQFGL--SPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAA 298 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--ChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHH
Confidence 3444455544444444455555 78899999 77999999999999999999999999999999999999999998888
Q ss_pred HHHHhh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc
Q 008603 88 LVMLWS-------PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA 160 (560)
Q Consensus 88 il~~~a-------~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~ 160 (560)
++..+. .+...++..-+..++..|.....++-++..++|. +-|.+.++....+.+|.++-+...... ....
T Consensus 299 ~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~-~~~t 376 (417)
T COG2223 299 ALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVS-LDLT 376 (417)
T ss_pred HHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHH-HHhc
Confidence 877764 3444444444444444444444555566666665 568889999999999876654333222 2223
Q ss_pred cchhHHHHHHHHHHHHHHHhhh
Q 008603 161 PSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 161 ~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
..+...|++...+.++++++.+
T Consensus 377 g~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 377 GSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred ccHHHHHHHHHHHHHHHHHHHH
Confidence 3589999999888888776544
No 177
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.69 E-value=3.5e-06 Score=88.29 Aligned_cols=154 Identities=19% Similarity=0.212 Sum_probs=105.8
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 008603 32 IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIG 111 (560)
Q Consensus 32 i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G 111 (560)
+.+++|+ +..+++.+...-+..+.+..++.|.++||+|||+.+++.+++++++++. -..+++..++++|++-|++..
T Consensus 60 LY~~yg~--~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 60 LYESYGF--SEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSSNYPVLLLGRVLGGIATS 136 (354)
T ss_pred HHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-HhccccHHHHHHHHHHHHHHH
Confidence 3467899 7799999999999999999999999999999999999999999998864 446899999999999999999
Q ss_pred HHHHHHHHHH-Hhhc----CCcchhhHhhHHHH-HHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheec
Q 008603 112 LAVTLVPIYI-SETA----PPEIRGLLNTLPQF-TGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYL 185 (560)
Q Consensus 112 ~~~~~~~~~i-sE~~----p~~~RG~~~~l~~~-~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~l 185 (560)
...++--.|+ .|.- |.+..+...+...+ .+.+-.+++.++.-........+-..+|....++.++..+++...-
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W 216 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTW 216 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence 9888777764 5552 33333332222221 1111112221111111111122346788887777777776666556
Q ss_pred cCC
Q 008603 186 PES 188 (560)
Q Consensus 186 pEs 188 (560)
+|.
T Consensus 217 ~EN 219 (354)
T PF05631_consen 217 PEN 219 (354)
T ss_pred ccc
Confidence 665
No 178
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.69 E-value=1.7e-06 Score=92.14 Aligned_cols=159 Identities=18% Similarity=0.058 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---hHHHH-HHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR---RPMLI-VSSVLYFIGGL 88 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GR---R~~ll-i~~ll~ai~~i 88 (560)
+.+++...........+|.+.++.+. +.. .+.......+..+++ .++++||+.| |+... ...++.++...
T Consensus 199 ~~~~~~~~~~~~~~~wlp~~L~~~g~--s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~ 272 (368)
T TIGR00903 199 AILGFGVALFDNLAIWLEAALRPAGL--EDI-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAALLIAAFFL 272 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC--ChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 33444444444555567766677777 433 455555555544444 4677777654 33323 23444444444
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHH
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLG 168 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~ 168 (560)
+..+..+....++.-++.+++.....+..+.+.+|.+|++.|++++++.+..+++|.++++....... .+-+..|.
T Consensus 273 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~----~~~~~~f~ 348 (368)
T TIGR00903 273 ALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI----SSAEAYFT 348 (368)
T ss_pred HHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh----cCHHHHHH
Confidence 44444444444555566777777777778889999999999999999999999999988865554333 15667787
Q ss_pred HHHHHHHHHHHhh
Q 008603 169 VLFIPSLIYFVLT 181 (560)
Q Consensus 169 i~ai~~ll~~il~ 181 (560)
+.+++.++.++.+
T Consensus 349 ~~~~~~~i~~~~~ 361 (368)
T TIGR00903 349 FLAILITIAFAIA 361 (368)
T ss_pred HHHHHHHHHHHHH
Confidence 7788777766654
No 179
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.68 E-value=1.7e-06 Score=92.68 Aligned_cols=145 Identities=11% Similarity=0.051 Sum_probs=110.1
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 008603 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFG 109 (560)
Q Consensus 30 p~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g 109 (560)
+++++.+|. ++.+.|++.+...+|.++++++.+++.||.++|+++..+. +.++..++..+.++++.+++.-++.|++
T Consensus 230 ~~~~~~lg~--s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 306 (393)
T PRK11195 230 AWAPVALGI--TLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGAL 306 (393)
T ss_pred HHHHHHcCC--ChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHh
Confidence 456777888 7799999999999999999999999999999998887775 3444444556667777777788899999
Q ss_pred HHHHHHHHHHHHHhhcCCcc-hhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 110 IGLAVTLVPIYISETAPPEI-RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 110 ~G~~~~~~~~~isE~~p~~~-RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
.+...+...+.+.+..|++. +|++.++.+...++|..++..+.... ...+-|..+.+..+..++.+.+
T Consensus 307 ~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 307 GGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL---VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred hhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH---HHcCCCHHHHHHHHHHHHHHHH
Confidence 99988888888888877665 79999999999999998886555433 2345555555544444444433
No 180
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.68 E-value=5.7e-07 Score=92.63 Aligned_cols=126 Identities=25% Similarity=0.394 Sum_probs=106.4
Q ss_pred HHHHHHHHHHH-HHHcCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh---hH
Q 008603 22 NATIAGAVLYI-KREFHLETE-PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP---NV 96 (560)
Q Consensus 22 ~~~~~~~lp~i-~~~~gls~s-~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~---s~ 96 (560)
.......+|.+ .++++. + ..+.+.+.+...++.+++.++.|+++||+|+|+.+.+......+..+.+.+.. +.
T Consensus 222 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T PF07690_consen 222 FSGFSFFLPLYLQEVLGF--SGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSP 299 (352)
T ss_dssp HHHHHHHHHHHCCHHHHC--CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHH
T ss_pred HHHhhcccchhhhhccCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 33455566665 888998 6 68999999999999999999999999999998888887777777766665533 45
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAY 149 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~ 149 (560)
...++.-++.|++.+...+....++.|.+|+++||++.++.+...++|..++|
T Consensus 300 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 300 VWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 67777888999999999999999999999999999999999999999998874
No 181
>PRK11462 putative transporter; Provisional
Probab=98.67 E-value=2.3e-06 Score=93.80 Aligned_cols=175 Identities=12% Similarity=0.140 Sum_probs=126.6
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCCh-HHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAG-AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRR-PMLIVSSVLYFIG 86 (560)
Q Consensus 13 l~~fl~g~~~~~~~~-~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr----~GRR-~~lli~~ll~ai~ 86 (560)
++.+........... ++.++.+.+|+ ++...|.+..+.-+--.+.-|+.|.++|| +||| +.++++.+..+++
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl--~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~ 93 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGI--PAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIV 93 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCC--CHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHH
Confidence 343333333333443 45567788899 88999999999999999999999999995 7975 6777887888887
Q ss_pred HHHHHhhhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcchhhHhhHHHHHHHHHHHHHHHHHHHHHh-c
Q 008603 87 GLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-M 158 (560)
Q Consensus 87 ~il~~~a~s------~~~lii~R~l~G~g~G~~~~~~~~~isE~~p-~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~-~ 158 (560)
.+++...|+ +..+.+.-++..++.........++.+|+.+ +++|.+.+++.....++|..+++.+...+.. .
T Consensus 94 ~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 94 CVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 776655442 3445556666777888887888889999998 7899999999999999888776555433221 1
Q ss_pred c----ccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 159 T----APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 159 ~----~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
. ..+|+....+.+++.++..++.++..+|.+
T Consensus 174 g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~ 208 (460)
T PRK11462 174 GGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERV 208 (460)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHhcceecc
Confidence 1 136888888888877776666555667753
No 182
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.67 E-value=2.6e-06 Score=90.51 Aligned_cols=149 Identities=11% Similarity=0.067 Sum_probs=105.2
Q ss_pred HHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHH
Q 008603 28 AVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-SPNVYVLLLARLLD 106 (560)
Q Consensus 28 ~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~-a~s~~~lii~R~l~ 106 (560)
..|++.+.+|. ++...+++.+...++.++++++.|+++||+|+|+.+.++..+.+++.++... .++.+..++..++.
T Consensus 222 ~~~~~~~~~g~--s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 299 (382)
T PRK10091 222 IKPYMMFISGF--SETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFIC 299 (382)
T ss_pred HHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45677777898 7789999999999999999999999999999999999888888777765543 45555666666677
Q ss_pred HHHHHHHHHHHHH-HHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHhhh
Q 008603 107 GFGIGLAVTLVPI-YISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-APSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 107 G~g~G~~~~~~~~-~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~-~~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
+++.....+.... ...+..|.+.++... .+....+|..+++... ....+ ..+|+..+.+.++..++......
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~--G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 300 CAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCG--GMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHh--HHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 7766554444343 444444555555543 3566778888885554 33333 35788888888777666544433
No 183
>PRK09848 glucuronide transporter; Provisional
Probab=98.66 E-value=2.3e-06 Score=92.99 Aligned_cols=128 Identities=18% Similarity=0.312 Sum_probs=98.2
Q ss_pred HHHHHHHHH-HHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHH
Q 008603 24 TIAGAVLYI-KREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLL 100 (560)
Q Consensus 24 ~~~~~lp~i-~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~--s~~~li 100 (560)
......|++ ++.+|. ++...++......++.+++.++.++++||+|+|+.+.++.++.+++.+++.+.+ +++.++
T Consensus 246 ~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~ 323 (448)
T PRK09848 246 AVSASSLFYVRYVLND--TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVAL 323 (448)
T ss_pred HHhhhheeeEeeecCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHH
Confidence 333345543 445665 455555555555677888999999999999999999999988888887776643 567777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCc-------chhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAPPE-------IRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p~~-------~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
+..++.|++.+...+...++.+|..+.+ .+|..+++.++...+|..++..+..
T Consensus 324 ~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 324 VALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999988753 4588899999988888888765543
No 184
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.66 E-value=9.9e-07 Score=97.89 Aligned_cols=182 Identities=18% Similarity=0.133 Sum_probs=118.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~ 90 (560)
+.+..|.+...........+.+.+..+.+.+. .+...+..+..++++.++..+.||+|||+.++.+...++++.+++
T Consensus 300 ~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~---~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~ 376 (513)
T KOG0254|consen 300 LLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT---FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVIL 376 (513)
T ss_pred HHHHHHHHHhCCceEEeehHHHHHhcCCCCch---HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHH
Confidence 34444444444455555677777888875332 444555555666777788999999999999999999999998877
Q ss_pred HhhhhH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 008603 91 LWSPNV--------------YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (560)
Q Consensus 91 ~~a~s~--------------~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~ 156 (560)
+..... ....++-++..+..+.. +..+.+++|.+|.+.|+++.++......+..++-..... .
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g-~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~--~ 453 (513)
T KOG0254|consen 377 AVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWG-PVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFP--F 453 (513)
T ss_pred HHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccc-cchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHH--H
Confidence 753211 12222233333333333 666778999999999999999987776666554422211 1
Q ss_pred hccccchhHHHHHHHHHHHHHHH-hhheeccCChhhhhhhcchHHHHHH
Q 008603 157 LMTAPSWRLMLGVLFIPSLIYFV-LTIFYLPESPRWLVSKGRMLEAKKV 204 (560)
Q Consensus 157 ~~~~~~Wr~~f~i~ai~~ll~~i-l~~~~lpEsP~~L~~~gr~~ea~~~ 204 (560)
.....++...|++.+....+..+ .+++++||+ |++..|..+.
T Consensus 454 ~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pET------kg~sleei~~ 496 (513)
T KOG0254|consen 454 ITEALGIGGTFGYFGGICLLSLIIFVFFFVPET------KGLTLEEINE 496 (513)
T ss_pred HHHhccccchHHHHHHHHHHHHHHHheEEcccC------CCCcHHHHHH
Confidence 11121245677777777777666 788999999 7776655443
No 185
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.64 E-value=3.7e-06 Score=89.91 Aligned_cols=144 Identities=17% Similarity=0.159 Sum_probs=98.3
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHH-HHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHH
Q 008603 29 VLYIKREFHLETEPTIEGLIVAMS-LIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM---LWS-PNVYVLLLAR 103 (560)
Q Consensus 29 lp~i~~~~gls~s~~~~gli~s~~-~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~---~~a-~s~~~lii~R 103 (560)
.+++.+++|+ ++.+.+++.... .++.+++.++.|++.||+|||+.+.++.++.++..+.+ ++. ++.+.++++-
T Consensus 233 ~~~l~~~~G~--~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 310 (402)
T PRK11902 233 TTFLIRGAGF--SAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAI 310 (402)
T ss_pred HHHHHHhcCC--CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 4567778898 778999988655 45688999999999999999998877776665554433 333 3555555544
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 104 ----LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 104 ----~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
+..|++.+...+....++.+.+|.+.++ +.+...++|..++.. .+....+..||+..|.+.++++++.++
T Consensus 311 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~--~~G~l~~~~G~~~~f~~~~~~~~~~~~ 384 (402)
T PRK11902 311 GIENLCGGMGTAAFVALLMALCNRSFSATQYA----LLSALASVGRVYVGP--TSGYLVEAYGWPGFYLMTVVIALPGLA 384 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH----HHHHHHHHHHHHHHH--HHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 3455566666667777777777766554 334444555554422 344556778999999999888877655
Q ss_pred h
Q 008603 180 L 180 (560)
Q Consensus 180 l 180 (560)
+
T Consensus 385 ~ 385 (402)
T PRK11902 385 L 385 (402)
T ss_pred H
Confidence 4
No 186
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.64 E-value=6e-07 Score=96.46 Aligned_cols=172 Identities=15% Similarity=0.174 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHH-HHHH-HHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIK-REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVS-SVLY-FIGG 87 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~-~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~-~ll~-ai~~ 87 (560)
.+..+|+.++..++..+..|... +..|+ ++++.|.+.++..+..++.+|+.|.++||+|.|+-+++. .++. ..+.
T Consensus 12 ~s~~~f~~Ff~~gi~~pF~~iWL~~~~GL--s~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~p 89 (412)
T PF01306_consen 12 LSLFYFFYFFIWGIFLPFFPIWLTQVAGL--SGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGP 89 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCC--CHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHH
Confidence 34455555666677777777555 45899 889999999999999999999999999999955544332 2222 2233
Q ss_pred HHH-Hhh----hhH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcccc
Q 008603 88 LVM-LWS----PNV-YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAP 161 (560)
Q Consensus 88 il~-~~a----~s~-~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~ 161 (560)
+.. .+. .|+ ...+++-+..|+......++.-+|+.... ++.+.-.|-.-+|+++|..++..+...+.. .
T Consensus 90 ff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~---i 164 (412)
T PF01306_consen 90 FFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFN---I 164 (412)
T ss_dssp HHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeee---e
Confidence 222 222 232 23333334445545555555555544442 333455566778888888887555543332 2
Q ss_pred chhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 162 SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 162 ~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
+-...|++..+.+++..++..+..|+.+
T Consensus 165 ~p~~~fwi~s~~~~il~lll~~~~~~~~ 192 (412)
T PF01306_consen 165 NPNIIFWIASAAAIILLLLLLLLKPDVP 192 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSS---SS
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCcCc
Confidence 4567888877777666665555555543
No 187
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.61 E-value=6.1e-06 Score=89.01 Aligned_cols=174 Identities=19% Similarity=0.232 Sum_probs=131.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVLYIKREFH-LETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i~~~~g-ls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~ 91 (560)
+..++.+..........+.+-++.| . +....+.+.+...+.-++.-.+.+++..|+|.|++++++++..++=..+++
T Consensus 214 l~~~l~~~~~~~~~~f~~~yl~~~gg~--~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 214 LAAFLIGISHAAYYTFFSIYLQELGGY--SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666666666677777 5 456777777788888888999999999999999999999999999888888
Q ss_pred hh-hhHHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHH-HHHHHHHHHHHHHHHHhcc----cc
Q 008603 92 WS-PNVYVLL----LARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFT-GCVGMFLAYCMVFGMSLMT----AP 161 (560)
Q Consensus 92 ~a-~s~~~li----i~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~-~~lG~~lg~li~~~l~~~~----~~ 161 (560)
+. ++.+... +.-.+.|+..+.+..++..|+.+.+|++.|+++.++++.. ..+|..++..+...++... ..
T Consensus 292 ~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~ 371 (400)
T PF03825_consen 292 YFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMF 371 (400)
T ss_pred HhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhh
Confidence 76 4544333 3345799999999999999999999999999999998765 5688888865554433211 22
Q ss_pred chhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 162 SWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 162 ~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
.|...+.+++++.++..++.+++.+|+
T Consensus 372 ~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 372 DWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 466777788887777777666666664
No 188
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.61 E-value=5.1e-06 Score=86.39 Aligned_cols=154 Identities=10% Similarity=0.019 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHH--cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVL-YIKRE--FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp-~i~~~--~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il 89 (560)
++.|+..-.........+ ++.+. +|+ ++.+.+...+.+..+.++++++.+++.||+|+|+++.++.++.+++.++
T Consensus 147 ~~~f~yvg~e~~~~~w~~~yl~~~~~~g~--s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l 224 (310)
T TIGR01272 147 LGIFVYVGAEVSAGSFLVNFLSDPHALGL--PEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIG 224 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 444443323333344444 55432 577 7899999999999999999999999999999999998888888877766
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH
Q 008603 90 MLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGV 169 (560)
Q Consensus 90 ~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i 169 (560)
....++...+ ..-++.|++.+..+|.......+..|++ .+++.++. ....+|..+.+.+. ....+..+.+..|++
T Consensus 225 ~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~--G~lad~~g~~~a~~v 299 (310)
T TIGR01272 225 AALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQ--GSLADCLGIQLAFAL 299 (310)
T ss_pred HHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHH--HHHHHhccchHHHHH
Confidence 6555543332 3556889999999999998888888764 45566664 45667777775433 344455677778775
Q ss_pred HHHH
Q 008603 170 LFIP 173 (560)
Q Consensus 170 ~ai~ 173 (560)
..+.
T Consensus 300 ~~~~ 303 (310)
T TIGR01272 300 PVPC 303 (310)
T ss_pred HHHH
Confidence 5444
No 189
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.59 E-value=8.1e-07 Score=98.58 Aligned_cols=167 Identities=14% Similarity=0.109 Sum_probs=140.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG--RRPMLIVSSVLYFIGG 87 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G--RR~~lli~~ll~ai~~ 87 (560)
..+++..+......+....+|.+.++.+. +..+.+.+.++..+..++++++.|+++|+.. ++.+..++.++.+++.
T Consensus 302 ~~~~~~~~~~~g~~~p~~~l~~~~~~~g~--~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~ 379 (509)
T KOG2504|consen 302 LLALSNLFAYLGFNVPFVYLPSYAKSLGL--SSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLAR 379 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCC--ChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHH
Confidence 34445555555556666678888889999 7799999999999999999999999999988 5567778888888888
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc-hhHH
Q 008603 88 LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS-WRLM 166 (560)
Q Consensus 88 il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~-Wr~~ 166 (560)
+.+.++++++.++..-.+.|++.|.+....+..+.|+.+.++-..+.++..++..++..+++-+. ....+..+ |...
T Consensus 380 ~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPia--g~~~d~tg~Y~~~ 457 (509)
T KOG2504|consen 380 LFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIA--GLLYDITGNYDHA 457 (509)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccc--eeeeeccCCeeee
Confidence 88899999999999999999999999888889999999999999999999999999999884433 35555544 9999
Q ss_pred HHHHHHHHHHHHHh
Q 008603 167 LGVLFIPSLIYFVL 180 (560)
Q Consensus 167 f~i~ai~~ll~~il 180 (560)
|+++++..++..++
T Consensus 458 f~~~g~~~~~s~~~ 471 (509)
T KOG2504|consen 458 FYFCGLCFLLSAVL 471 (509)
T ss_pred hhhcChHHHHHHHH
Confidence 99999988887654
No 190
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.58 E-value=3.4e-06 Score=90.48 Aligned_cols=151 Identities=13% Similarity=-0.006 Sum_probs=108.0
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-WLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLL 105 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD-r~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l 105 (560)
..+|.+.++.+. ++...+++.+...++..+...+.+.+.| |++.++.+..++++.+++.+++.++++++.+++..++
T Consensus 229 ~~~p~~~~~~~~--~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 306 (400)
T PRK11646 229 LMLPIMVNDIAG--SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICL 306 (400)
T ss_pred HhhhhhHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 346665556554 4577788877777766655555566655 5666677778888888888888888888877778888
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc-ccc-hhHHHHHHHHHHHHHHH
Q 008603 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT-APS-WRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 106 ~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~-~~~-Wr~~f~i~ai~~ll~~i 179 (560)
.+++.+...+...+++.+.+|+++||+..++.+....+|..+++.+...+.... ..+ -...+.+.++..++..+
T Consensus 307 ~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (400)
T PRK11646 307 FYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLL 382 (400)
T ss_pred HHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHH
Confidence 899888888888999999999999999999999999999999866554443221 112 24455555555555443
No 191
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.58 E-value=4.1e-06 Score=87.66 Aligned_cols=127 Identities=20% Similarity=0.194 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPNVYVLLL 101 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-GRR~~lli~~ll~ai~~il~~~a~s~~~lii 101 (560)
......+|.+.++.|. +..+.+.+.+...++.++++++.|+++||+ +||+.+.++.++.+++.+++.+.++.....
T Consensus 214 ~~~~~~lp~~~~~~g~--~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 290 (355)
T TIGR00896 214 YSLIGWLPAILISHGA--SAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA- 290 (355)
T ss_pred HHHHHHHHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-
Confidence 3344456766667888 778999999999999999999999999999 567777777777777777776655433322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC-CcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p-~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
.-++.|++.|...+.....+.+..+ ++.++...++.+....+|..+++.+.
T Consensus 291 ~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~ 342 (355)
T TIGR00896 291 WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFV 342 (355)
T ss_pred HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467899998888877777765554 56778888888888888877775444
No 192
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.56 E-value=9.3e-07 Score=95.82 Aligned_cols=152 Identities=21% Similarity=0.198 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHcC----CCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhh--hHH
Q 008603 25 IAGAVLYIKREFH----LETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSP--NVY 97 (560)
Q Consensus 25 ~~~~lp~i~~~~g----ls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-GRR~~lli~~ll~ai~~il~~~a~--s~~ 97 (560)
-+.+..|+..+++ + ++++..-+.+++..-.=+..+++|+++||+ |+|+.+..+.++++++.++.+.++ +..
T Consensus 41 raiL~~Yl~~~~~~gLg~--~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~ 118 (498)
T COG3104 41 RAILILYLYYQLGDGLGF--DETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPG 118 (498)
T ss_pred HHHHHHHHHHhccccCCc--ChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccccc
Confidence 3445567777776 7 667766666666665567888999999996 999999999999999999999874 788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc--hhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHH
Q 008603 98 VLLLARLLDGFGIGLAVTLVPIYISETAPPEI--RGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSL 175 (560)
Q Consensus 98 ~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~--RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~l 175 (560)
.+.++-.++++|.|.+=+....++.|.+|++. |-..++++.+..++|.++++++. .......+|...|.+.++-..
T Consensus 119 gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~--~~~~~~~g~~~gF~~aavGm~ 196 (498)
T COG3104 119 GLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIIT--GLLAINYGWHVGFGLAAVGMI 196 (498)
T ss_pred HHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHH--HHHHHhhCHHHHHHHHHHHHH
Confidence 89999999999999999999999999998743 56678888899999999996655 444567789999988888777
Q ss_pred HHHHh
Q 008603 176 IYFVL 180 (560)
Q Consensus 176 l~~il 180 (560)
+.++.
T Consensus 197 ~gl~~ 201 (498)
T COG3104 197 IGLVI 201 (498)
T ss_pred HHHHH
Confidence 66544
No 193
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.55 E-value=2e-06 Score=92.05 Aligned_cols=232 Identities=15% Similarity=0.145 Sum_probs=160.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHH
Q 008603 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSV 81 (560)
Q Consensus 2 ~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~l 81 (560)
+|+|+++++.++-++..++.+-.++++..+...-|+ +....-|...++.+.++...+.+-|+.|++|-|..++++..
T Consensus 41 ~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg---s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ 117 (480)
T KOG2563|consen 41 PRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG---SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTV 117 (480)
T ss_pred hhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc---chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHH
Confidence 478888888888888888888777888888888888 44667788889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhh------hHH--HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 82 LYFIGGLVMLWSP------NVY--VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 82 l~ai~~il~~~a~------s~~--~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
+.+++..+-..+. .++ ....+..+.+.+.-.......-..+-++|+++|..++.+..+...+|..++.++..
T Consensus 118 ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llpp 197 (480)
T KOG2563|consen 118 LNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPP 197 (480)
T ss_pred HHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccc
Confidence 9999998766542 334 55566677766666555544556678899999999999988888888888866654
Q ss_pred HHHhcc----ccchhH--HHHHHHHHHHHHHHhhheeccCChhhh----hhhcchHHHHHHHHHHhcCcChHHHHHHHHH
Q 008603 154 GMSLMT----APSWRL--MLGVLFIPSLIYFVLTIFYLPESPRWL----VSKGRMLEAKKVLQSLRGREDVAGEMALLVE 223 (560)
Q Consensus 154 ~l~~~~----~~~Wr~--~f~i~ai~~ll~~il~~~~lpEsP~~L----~~~gr~~ea~~~l~~l~~~~~~~~~i~~l~~ 223 (560)
.+.-.. ...|-. +|+...++..+.++++.+..++.|+.- ..+.+...-.+.+.+. ..+....+..+++
T Consensus 198 ilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~--~~n~~F~il~~~y 275 (480)
T KOG2563|consen 198 ILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAALQDASFPKSIKSC--FKNRQFIILAICY 275 (480)
T ss_pred eecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHH--HcCccHHHHHHHH
Confidence 443222 334544 455555555555566666666644221 1111100111222222 2344556777888
Q ss_pred HHHhhhhhhHHHHHh
Q 008603 224 GLGVGGETSLEEYII 238 (560)
Q Consensus 224 ~l~~g~~~t~~~~i~ 238 (560)
+...+....+...+.
T Consensus 276 gi~~g~F~~l~~~l~ 290 (480)
T KOG2563|consen 276 GIGLGLFNSLSTLLN 290 (480)
T ss_pred hhhHHHHHHHHHHhh
Confidence 888877777665544
No 194
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.55 E-value=8e-06 Score=89.67 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=94.9
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh-----hhhHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW-----SPNVY 97 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~-----a~s~~ 97 (560)
.......+++.+.... ++...+++.+...++.+++.++.++++||+|||+.+.++.++.+++.+.+.+ .++.+
T Consensus 248 ~~~~~~~~y~~~y~~~--~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (473)
T PRK10429 248 NIINGFAIYYFTYVIG--DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNAL 325 (473)
T ss_pred HHHhhheeeEEEEECC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHH
Confidence 3334444555554433 4566777777777888999999999999999999999888776666655432 34566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcC-------CcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 98 VLLLARLLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 98 ~lii~R~l~G~g~G~~~~~~~~~isE~~p-------~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
.+++.-++.|++.+...+..+++++|..+ .+..|...++..+..-+|..+++.+..
T Consensus 326 ~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 326 LIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777788999999999999999999966 333466788888887788877755443
No 195
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.54 E-value=1.3e-05 Score=84.30 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=82.8
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh----hhhHHHHHHHHHHH
Q 008603 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW----SPNVYVLLLARLLD 106 (560)
Q Consensus 31 ~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~----a~s~~~lii~R~l~ 106 (560)
++.+.+|. ++.+.+++.+...++.+++.++.|++.||+|||+.+.++..+..+..+.... ..+++.+.++-.+.
T Consensus 220 ~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (377)
T PRK11102 220 VYIELNGV--SPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAF 297 (377)
T ss_pred HHHHHhCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 45677888 7899999999999999999999999999999999988887765444333222 22444444444455
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHH-HHHHHHHHHH
Q 008603 107 GFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFT-GCVGMFLAYC 150 (560)
Q Consensus 107 G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~-~~lG~~lg~l 150 (560)
+.+.+........++.|..| +.++..+++.+.. ..+|..++..
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~ 341 (377)
T PRK11102 298 VGCVSMISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGAL 341 (377)
T ss_pred HHHHHHhhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 55555555566667778776 7889988886554 3455555543
No 196
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.53 E-value=9e-06 Score=86.28 Aligned_cols=111 Identities=14% Similarity=0.194 Sum_probs=77.0
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 008603 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (560)
Q Consensus 31 ~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~ 110 (560)
++.+++|. ++.+.+.+.+...++.+++.++.+++.||+|||+.+.++.++..++.+++.+.++....++.-++.+++.
T Consensus 229 ~~~~~~g~--~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~ 306 (392)
T PRK10473 229 LLMEQMGF--SRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGF 306 (392)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677898 7788999999999999999999999999999999999999988888887777665554444444545444
Q ss_pred HHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHH
Q 008603 111 GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (560)
Q Consensus 111 G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg 148 (560)
+...+. .+..+..|.++|+ +.......+++.++
T Consensus 307 ~~~~~~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g 339 (392)
T PRK10473 307 SVGFGV--AMSQALGPFSLRA---GVASSTLGIAQVCG 339 (392)
T ss_pred HHHhHH--HHHHHhccCcccc---cHHHHHHHHHHHHH
Confidence 444332 3445566655553 22233334444444
No 197
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.53 E-value=5.6e-06 Score=90.67 Aligned_cols=167 Identities=14% Similarity=0.012 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVLYI-KREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i-~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~ 91 (560)
+.++..+-.....+..+|++ ++.+. ............+...+.++++|+++||+|+|+++.++.++.+++.....
T Consensus 259 lly~~tFG~fvg~s~~lp~~~~~~~~----~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~ 334 (462)
T PRK15034 259 LLYLATFGSFIGFSAGFAMLAKTQFP----DVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLF 334 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC----hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 33333333333344455544 44442 22222233344567788899999999999999999998887777664322
Q ss_pred -hh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---------------------cchhhHhhHHHHHHHHH
Q 008603 92 -WS-----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP---------------------EIRGLLNTLPQFTGCVG 144 (560)
Q Consensus 92 -~a-----~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~---------------------~~RG~~~~l~~~~~~lG 144 (560)
.. .+++.+.+.-+...++.|.....++-++..++|. ++-|.+.|+....+.+|
T Consensus 335 l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~G 414 (462)
T PRK15034 335 LTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVG 414 (462)
T ss_pred HHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcc
Confidence 22 2466666666665566666666667777777774 14567778888888887
Q ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhee
Q 008603 145 MFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFY 184 (560)
Q Consensus 145 ~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~ 184 (560)
.++-+...-.. .....++...|++..+..+++.++.+.+
T Consensus 415 gf~~p~~~g~~-~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 415 GFFIPQAFGMS-LNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred cchhhHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 77765333222 2223457777888888877777665544
No 198
>PRK09669 putative symporter YagG; Provisional
Probab=98.50 E-value=1.3e-05 Score=86.90 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh--hhhHHHHHH
Q 008603 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW--SPNVYVLLL 101 (560)
Q Consensus 24 ~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~--a~s~~~lii 101 (560)
..+...+++.+.. +. .+...+.+.....+..+++.++.++++||+|+|+.+.++.++.++..+...+ .++.+.+++
T Consensus 247 ~~~~~~~y~~~~~-~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (444)
T PRK09669 247 TRGGATLYYVNYV-LL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFA 324 (444)
T ss_pred HHhhhhheeeeee-cC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 3334445544433 21 3344555666667888899999999999999999998887766654443333 346777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC-------CcchhhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p-------~~~RG~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
..++.|++.+...+..+.+++|..+ .+..|...+...+...+|..+++.+...
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ 384 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGW 384 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999886 2334667788877888888887655543
No 199
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.49 E-value=4.2e-06 Score=91.08 Aligned_cols=177 Identities=20% Similarity=0.293 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCC-hHHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGR-RPMLIVSSVLYF 84 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr----~GR-R~~lli~~ll~a 84 (560)
-.++.+............+. ++.+.+|+ ++...|.+..+.=+--++.-|+.|.++|| +|| ||.++++.+..+
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gi--s~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~ 94 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGL--SAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFA 94 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCC--cHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHH
Confidence 34445555444444444444 56777899 88999999999999999999999999994 785 478888888888
Q ss_pred HHHHHHHhhhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CcchhhHhhHHHHHHHHHHHHHHHHHHHH-H
Q 008603 85 IGGLVMLWSPN------VYVLLLARLLDGFGIGLAVTLVPIYISETAP-PEIRGLLNTLPQFTGCVGMFLAYCMVFGM-S 156 (560)
Q Consensus 85 i~~il~~~a~s------~~~lii~R~l~G~g~G~~~~~~~~~isE~~p-~~~RG~~~~l~~~~~~lG~~lg~li~~~l-~ 156 (560)
+.++++..+++ ....++...+.+++......+..++.+|+.+ +++|.+..++-+...++|.++.......+ .
T Consensus 95 i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~ 174 (467)
T COG2211 95 IVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVK 174 (467)
T ss_pred HHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877663 4455666778888888888888889999986 58899999999999999976654443222 2
Q ss_pred hcc----ccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 157 LMT----APSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 157 ~~~----~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
... ..+|+..-.+.+++.++.+++.++-.+|-+
T Consensus 175 ~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~ 211 (467)
T COG2211 175 LFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERV 211 (467)
T ss_pred HhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 221 348998888888888888888777788764
No 200
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.49 E-value=4.2e-06 Score=90.04 Aligned_cols=145 Identities=15% Similarity=0.224 Sum_probs=119.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 42 PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYI 121 (560)
Q Consensus 42 ~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~i 121 (560)
....|.+.+...+.-++...++.++.+|+|.|+.++++.+++++=.++++++++.+.+.+.+.+.|+-.+.......-|+
T Consensus 258 ~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI 337 (412)
T PF01306_consen 258 NQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYI 337 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcchhhHhhH-HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 122 SETAPPEIRGLLNTL-PQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 122 sE~~p~~~RG~~~~l-~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
++.+|++..++...+ ++....+|..+.+ .+.....+..|.+..|++.+.+.++..++..+.++..
T Consensus 338 ~~~fd~rlsAt~y~v~~~~~~~~~~~i~s--~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 338 TAHFDKRLSATLYLVGFQFAKQIGIIILS--PLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHS-GGGHHHHHHHHHTTTHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHhCCHhHHHHHHHHHHHHHHHHHHHHHh--hhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCC
Confidence 999999988777766 3666677777653 3445566778999999999998888777777766643
No 201
>PRK10133 L-fucose transporter; Provisional
Probab=98.47 E-value=1.2e-05 Score=87.68 Aligned_cols=144 Identities=7% Similarity=-0.054 Sum_probs=104.4
Q ss_pred HHHH-HHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 008603 29 VLYI-KREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDG 107 (560)
Q Consensus 29 lp~i-~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G 107 (560)
.+++ ++.+|+ ++...++....+.++.++++++.+++.||+|||+++..+.++.++..++..+.++.. .+..-++.|
T Consensus 282 ~~~l~~~~~g~--s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~g 358 (438)
T PRK10133 282 IRYAVEEIPGM--TAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCS 358 (438)
T ss_pred HHHHhhhcCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHH
Confidence 3453 456798 889999999999999999999999999999999999888888777666666655543 245567899
Q ss_pred HHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccc-hhHHHHHHHHHHHHHHH
Q 008603 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPS-WRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 108 ~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~-Wr~~f~i~ai~~ll~~i 179 (560)
++.+..+|..+....+.+|.+ .+.+.++..+.. +|..+++.+. ....+..+ -|..|+++.+..+...+
T Consensus 359 lg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~~~-~g~~~~~~i~--G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 359 AFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVMTI-IGGGIVTPVM--GFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HHHHHHHHHHHHHHHcccchh-hccchhHHhHHh-ccchHHHHHH--HHHHHhccchHHHHHHHHHHHHHHHH
Confidence 999999999999999987764 566777765433 4444443222 23334444 67788766665554433
No 202
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.46 E-value=4.8e-06 Score=89.93 Aligned_cols=139 Identities=15% Similarity=0.206 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVM 90 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp~i~~~-~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~ 90 (560)
.+..++............+++.++ ++. +...+.+..+..++.+++.++.++++||+|+|+++..+.++.+++.+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~y~~~~vl~~---~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~ 307 (428)
T PF13347_consen 231 LLAFFLQWLAFALMNTFLPYYFTYVLGN---EGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLL 307 (428)
T ss_pred HHHHHHHHhhhhhhhhHHHHHHHHHhcC---chhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHH
Confidence 334444445555555556655554 554 3577888888999999999999999999999999999999999999988
Q ss_pred Hhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-------cchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 91 LWSP--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPP-------EIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 91 ~~a~--s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~-------~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
.+.+ |.+.+++.-++.|++.+...+..+.+++|..+. +..|..+++..+...+|..++..+..
T Consensus 308 ~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 308 FFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred HHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 8876 999999999999999999999999999998873 34588888888888888877755443
No 203
>PRK11043 putative transporter; Provisional
Probab=98.44 E-value=3.9e-05 Score=81.70 Aligned_cols=123 Identities=18% Similarity=0.121 Sum_probs=91.1
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---h--hhhHHHHHH
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML---W--SPNVYVLLL 101 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~---~--a~s~~~lii 101 (560)
...|.+.+++|. ++.+.++......++.+++.++.+++.||+|+|+.+....++.+++.+.+. + .++.+.+++
T Consensus 224 ~~~p~~~~~~g~--s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (401)
T PRK11043 224 TGSPFILEQMGY--SPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLI 301 (401)
T ss_pred HHhHHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 346666677888 778899888888888999999999999999999877665555444433221 2 345555666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 102 ARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 102 ~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
.-.+.|++.+...+.......+..| ++||++.++.+.....+..+++.+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~ 351 (401)
T PRK11043 302 PFCVMAAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLV 351 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHH
Confidence 6778888888888888888777776 5799999999887766666664443
No 204
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.41 E-value=6.6e-06 Score=83.32 Aligned_cols=169 Identities=12% Similarity=0.090 Sum_probs=116.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH
Q 008603 3 GAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL 82 (560)
Q Consensus 3 ~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll 82 (560)
...+++.++|+++....+-..... -..+++.||+ ++...+.+.+.....+.+.+++.|.++|++||+...+.+.++
T Consensus 264 ppfw~~~iicv~yyva~fPFi~lg--~~fF~~rfGl--S~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 264 PPFWVLVIICVLYYVAWFPFITLG--PMFFQKRFGL--SAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhh--HHHHHHhhCC--ChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 345556666666655444333332 2367899999 789999999999998999999999999999999776666554
Q ss_pred HHH-HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc-
Q 008603 83 YFI-GGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA- 160 (560)
Q Consensus 83 ~ai-~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~- 160 (560)
..+ +-....| +++.=.+...+.|++........+..++.+.|.++-|++.++.+...++|..+.+++...+...+.
T Consensus 340 ~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 340 LTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred HHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 443 3333333 223333455678888888877788899999999999999999999999999888655533322221
Q ss_pred cchhH-HHHHHHHHHHHH
Q 008603 161 PSWRL-MLGVLFIPSLIY 177 (560)
Q Consensus 161 ~~Wr~-~f~i~ai~~ll~ 177 (560)
..|-- .|.++..++++.
T Consensus 418 y~~le~ffl~~~~~aL~s 435 (459)
T KOG4686|consen 418 YDNLEAFFLIIGLMALTS 435 (459)
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 23433 344444555443
No 205
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.36 E-value=2.5e-06 Score=88.65 Aligned_cols=97 Identities=18% Similarity=0.055 Sum_probs=78.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc------------
Q 008603 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT------------ 159 (560)
Q Consensus 92 ~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~------------ 159 (560)
...++..+++.-|+.|.|.+...+.++.|++++.|++++.+.+++.+..+.+|.+++|++...+....
T Consensus 6 ~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~ 85 (310)
T TIGR01272 6 SQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATAN 85 (310)
T ss_pred HhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhh
Confidence 45789999999999999999999999999999999999999999999999999999988877655321
Q ss_pred --ccchhHHHHHHHHHHHHHHHhh-heeccCC
Q 008603 160 --APSWRLMLGVLFIPSLIYFVLT-IFYLPES 188 (560)
Q Consensus 160 --~~~Wr~~f~i~ai~~ll~~il~-~~~lpEs 188 (560)
...|++.|++.+++.++..++. ..-.||.
T Consensus 86 ~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~ 117 (310)
T TIGR01272 86 AEAAKVHTPYLLLAGALAVLAIIFAFLPLPEL 117 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 1479999986666655544432 3334554
No 206
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.34 E-value=3.7e-05 Score=84.68 Aligned_cols=137 Identities=13% Similarity=0.083 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCC-----hHHH--HHHHHHHHHHHHHHHh---------hhhHHHHHHHHHHHHH
Q 008603 45 EGLIVAMSLIGATCITTCSGAIADWLGR-----RPML--IVSSVLYFIGGLVMLW---------SPNVYVLLLARLLDGF 108 (560)
Q Consensus 45 ~gli~s~~~lG~iig~~~~G~LsDr~GR-----R~~l--li~~ll~ai~~il~~~---------a~s~~~lii~R~l~G~ 108 (560)
.+++.+...+..++.+++...+..++.| +... .+++++.+++.+.+++ ..|++.+++..++.++
T Consensus 314 ~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ 393 (475)
T TIGR00924 314 VIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTL 393 (475)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHH
Confidence 4566666666666776665554444433 3433 6778888777777664 4589999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhe
Q 008603 109 GIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (560)
Q Consensus 109 g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~ 183 (560)
|-....+..+.++++.+|++.||+.+++......+|..++..+.... ....+|...|...++..++..++.++
T Consensus 394 ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (475)
T TIGR00924 394 GELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFG--AVPQGVTGVFGKIGLVTLLVGVVMAL 466 (475)
T ss_pred HHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcccchhhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999885555333 23446888888888777776665443
No 207
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.31 E-value=4.3e-07 Score=97.18 Aligned_cols=188 Identities=14% Similarity=0.011 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHH------HHH-HHHHHHHHHHHHHHHHHHHhhhCChHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIE------GLI-VAMSLIGATCITTCSGAIADWLGRRPMLIV 78 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~------gli-~s~~~lG~iig~~~~G~LsDr~GRR~~lli 78 (560)
..++..+..+|+.-..+...+.....+.++++...+.... ... ..+..++.+.+..+...++|++|||++.+.
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~ 383 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLM 383 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHh
Confidence 5667788888888888887777788888887763322211 111 122223344466677888999999999999
Q ss_pred HHHHHHHHHHHHHhhhh----HHHHHHHHHHHHHHH-HHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 79 SSVLYFIGGLVMLWSPN----VYVLLLARLLDGFGI-GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 79 ~~ll~ai~~il~~~a~s----~~~lii~R~l~G~g~-G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
+.+++.+..+.++...| ...+++...+..+.. -+..+.+..+-+|.+|.+.|++..++....+-.|.+++....
T Consensus 384 GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F- 462 (538)
T KOG0252|consen 384 GFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGF- 462 (538)
T ss_pred hHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHh-
Confidence 99999999988887655 222333333332222 222344556779999999999999999999999999984433
Q ss_pred HHHhcc-----ccchhHHHHHHHHHHHHHHHhhheeccCChhhhhhhcchHHHH
Q 008603 154 GMSLMT-----APSWRLMLGVLFIPSLIYFVLTIFYLPESPRWLVSKGRMLEAK 202 (560)
Q Consensus 154 ~l~~~~-----~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~L~~~gr~~ea~ 202 (560)
....+ ..+.|..|++.+.+.++..+ ..+++||| ++|..|..
T Consensus 463 -~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~-~T~l~pEt------k~~~leei 508 (538)
T KOG0252|consen 463 -LYLTDHNYPPNIGVRNVFIILAGCMLLGIL-FTLLIPET------KGKSLEEI 508 (538)
T ss_pred -hHhhhccCCccccchHHHHHHHHHHHHhHh-eeEEeecc------cccCHHHh
Confidence 44444 55789999999998888554 46778898 66655443
No 208
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.30 E-value=7.7e-06 Score=85.30 Aligned_cols=112 Identities=18% Similarity=0.229 Sum_probs=85.6
Q ss_pred HHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh--hh--hHHHHHHHHHH
Q 008603 30 LYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW--SP--NVYVLLLARLL 105 (560)
Q Consensus 30 p~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~--a~--s~~~lii~R~l 105 (560)
.++++.+|. ++.+.+++.+...+..++++++.|+++||+|||+.+..+..+.+.+.++..+ .+ +...+.+.-++
T Consensus 250 ~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (366)
T TIGR00886 250 MFFKDQFGL--SKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVA 327 (366)
T ss_pred HHHHHHcCC--cHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHH
Confidence 356677898 7788999999999999999999999999999998887777666666555543 22 55555555666
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHH
Q 008603 106 DGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVG 144 (560)
Q Consensus 106 ~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG 144 (560)
.++..|...+....++++.+| +++|..+++.+...++|
T Consensus 328 ~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 328 LFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 666666666677778888887 68999999887776654
No 209
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.28 E-value=5.9e-05 Score=83.67 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHHHHHHHH----HHHHhhhCChHHHHHHHHHHHHHHHHHHhhhh---------HHHHHHHHHHHHHHHHH
Q 008603 46 GLIVAMSLIGATCITTCS----GAIADWLGRRPMLIVSSVLYFIGGLVMLWSPN---------VYVLLLARLLDGFGIGL 112 (560)
Q Consensus 46 gli~s~~~lG~iig~~~~----G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s---------~~~lii~R~l~G~g~G~ 112 (560)
+++.+...+..++..++. +++.+|++..+.+.+++++.+++.++++++.+ .+.+++.+++.|++...
T Consensus 319 ~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~ 398 (500)
T PRK09584 319 EQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELM 398 (500)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHH
Confidence 444444554455555555 55555566667888899999999888777654 46788999999999999
Q ss_pred HHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh----c----cccchhHHHHHHHHHHHHHHHhhhe
Q 008603 113 AVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----M----TAPSWRLMLGVLFIPSLIYFVLTIF 183 (560)
Q Consensus 113 ~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~----~----~~~~Wr~~f~i~ai~~ll~~il~~~ 183 (560)
..+....++.+..|++.||+.+++......+|..++..+.-.... . ...+....|...++.+++..++.+.
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887777777665333311110 0 0113567777777776655444333
No 210
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.27 E-value=3e-05 Score=82.69 Aligned_cols=149 Identities=15% Similarity=0.195 Sum_probs=115.4
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHHHHHHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVLYFIGGLVMLWSPN---VYVLLLARLLDGFGIGLAVTL 116 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~G-RR~~lli~~ll~ai~~il~~~a~s---~~~lii~R~l~G~g~G~~~~~ 116 (560)
+.+..+...++..+-..+-.|+.|.++|+.| ||+.+-+...+..++.+++.++++ ++..++...+..++.....+.
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 4467788888888888899999999999999 556777777777888888888765 445555567788888888888
Q ss_pred HHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh-c---------------cccchhHHHHHHHHHHHHHHHh
Q 008603 117 VPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-M---------------TAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 117 ~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~-~---------------~~~~Wr~~f~i~ai~~ll~~il 180 (560)
..+++.+..+++..++..++-...+.+|..+..+....... . +...-|..+.+.++..++..+-
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iP 215 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALP 215 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhH
Confidence 89999999999999999998888888888776544433321 1 3446788898888888887777
Q ss_pred hheeccCCh
Q 008603 181 TIFYLPESP 189 (560)
Q Consensus 181 ~~~~lpEsP 189 (560)
.++..++.+
T Consensus 216 m~~~v~~~~ 224 (438)
T COG2270 216 MILNVHDAE 224 (438)
T ss_pred HHhcccccc
Confidence 677777765
No 211
>PRK11462 putative transporter; Provisional
Probab=98.23 E-value=0.00027 Score=77.54 Aligned_cols=128 Identities=14% Similarity=0.215 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhh--hHHHHH
Q 008603 23 ATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSP--NVYVLL 100 (560)
Q Consensus 23 ~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~--s~~~li 100 (560)
...+....++.+...- ++...+.+...+.++.+++.+++++++||+|+|+.+..+..+.++..++..+.+ +...++
T Consensus 245 ~~~~~~~~y~~~y~~g--~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (460)
T PRK11462 245 CVRGGAMMYYVTWILG--TPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMF 322 (460)
T ss_pred HHHHhHhhhhhhhhcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHH
Confidence 3333444444444322 334456677788888999999999999999999887765554444333333322 233344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC-------CcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAP-------PEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p-------~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
+.-++.|++.+...+..+.+++|... .+.-|...+...+...+|..++..+.
T Consensus 323 ~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 323 VFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 55567788887777777778887766 23335545555566777776665444
No 212
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.20 E-value=8.3e-05 Score=69.79 Aligned_cols=107 Identities=21% Similarity=0.186 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 008603 48 IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP 127 (560)
Q Consensus 48 i~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~ 127 (560)
-.++.+....++.++.+.+.+++|.|+.++++.+.+++-.... +-++.+.++.+-.+.|++.+..++..-.|+.+...+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3455556677788888999999999999999999988766554 456788899999999999999999999999999999
Q ss_pred cchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 128 ~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
+.|++..+++-.....+.++|.+..+..
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988888788888876655443
No 213
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.20 E-value=0.00016 Score=77.13 Aligned_cols=119 Identities=21% Similarity=0.219 Sum_probs=94.3
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-----Ch-HHHHHHHHHHHHHHHHHHhh-----h-----
Q 008603 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG-----RR-PMLIVSSVLYFIGGLVMLWS-----P----- 94 (560)
Q Consensus 31 ~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G-----RR-~~lli~~ll~ai~~il~~~a-----~----- 94 (560)
.+..|+++ .....+...+...+.+. .++..|..||+.+ || +.+..+.++.+.+..++.++ .
T Consensus 5 VMIvEL~v--pA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~ 81 (403)
T PF03209_consen 5 VMIVELGV--PAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQS 81 (403)
T ss_pred hHHHHhcc--HHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 45678998 77899999988888765 6999999999988 77 55666666666665555441 2
Q ss_pred ---h---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 95 ---N---VYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 95 ---s---~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
. .....+..++.|++.+...++..++++|..|+++|+++.++...+--+|++++....
T Consensus 82 ~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 82 SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 1 134455677899999999999999999999999999999999999999999885443
No 214
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.18 E-value=2.3e-05 Score=85.95 Aligned_cols=170 Identities=18% Similarity=0.269 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHH----HHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVA----MSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s----~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~ 87 (560)
.+-.|..+.......+..++....++.+.+ ...+.... ...+..++.+++.|.++||+|||..+.+..+...+..
T Consensus 28 fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~-~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~ 106 (463)
T KOG2816|consen 28 FLYMFSWGLSSTVMTNVILYLACTFGDDYQ-LENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPA 106 (463)
T ss_pred HHHHHHHHhcCcchhhhhhhhhcccccCcc-chhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhH
Confidence 333444444444445555665555554221 22233333 3367788999999999999999999999999988888
Q ss_pred HHHHhhhhHHHHHHHHHHHHHH--HHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhH
Q 008603 88 LVMLWSPNVYVLLLARLLDGFG--IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRL 165 (560)
Q Consensus 88 il~~~a~s~~~lii~R~l~G~g--~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~ 165 (560)
+++.+.. +|.++ +.++. .+.....+.+|++++...+.|....++.......+..+++.. +.......+.-.
T Consensus 107 ~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~--~~~~~~~~~~a~ 179 (463)
T KOG2816|consen 107 LCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPAL--GGYLVKFLGIAL 179 (463)
T ss_pred HHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHH--HHHHHHhcCchH
Confidence 8887765 33332 33332 333457778899999999999999999999888888888444 444455577888
Q ss_pred HHHHHHHHHHHHHHhhheeccCCh
Q 008603 166 MLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 166 ~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
.|.+..+..++..+...+++||+-
T Consensus 180 ~f~ia~~~~~~~~~y~~~~l~Esl 203 (463)
T KOG2816|consen 180 VFLIAAASGILSLLYMLLFLPESL 203 (463)
T ss_pred HHHHHHHHHHHHHHHHhhcccccc
Confidence 999999999999999999999983
No 215
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.18 E-value=0.00027 Score=75.00 Aligned_cols=119 Identities=18% Similarity=0.132 Sum_probs=87.9
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHH-HHHHHHHh--hhhHHHHHHHHHHHH
Q 008603 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYF-IGGLVMLW--SPNVYVLLLARLLDG 107 (560)
Q Consensus 31 ~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~a-i~~il~~~--a~s~~~lii~R~l~G 107 (560)
++.+.+|. ++.+.+++.....++.+++.++.+++.||++|+.......++.. +......+ ..+.+.+++..++.|
T Consensus 233 ~~~~~~g~--~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (394)
T PRK11652 233 LMGAVLGL--SSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFF 310 (394)
T ss_pred HHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 45556888 77889999888889999999999999999984433322222222 11111122 235667778889999
Q ss_pred HHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 108 FGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 108 ~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
++.+...+....++.|.+| +.+|+..++.+....+|..+++.+.
T Consensus 311 ~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~ 354 (394)
T PRK11652 311 FGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLS 354 (394)
T ss_pred HHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999987 5789999999988899998885544
No 216
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.17 E-value=0.00018 Score=77.74 Aligned_cols=146 Identities=5% Similarity=-0.093 Sum_probs=97.9
Q ss_pred HHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q 008603 27 GAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLD 106 (560)
Q Consensus 27 ~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~ 106 (560)
..++.+.++.+...+....+...+.+..+..++++++++++||+++|+++.++.++.++..++..+.++... ..+-++.
T Consensus 253 s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~ 331 (410)
T TIGR00885 253 TFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLC 331 (410)
T ss_pred HHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHH
Confidence 334433344332224455555666666788999999999999999999999999988888888888776544 4566778
Q ss_pred HHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccc-----c-chhHHHHHHHHHHHHH
Q 008603 107 GFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTA-----P-SWRLMLGVLFIPSLIY 177 (560)
Q Consensus 107 G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~-----~-~Wr~~f~i~ai~~ll~ 177 (560)
|++.+..+|+...+..+..+++.+.....+ .+. .+|..+.+.+... ..+. . +.+..|.++.++-+..
T Consensus 332 glf~s~~fp~i~sl~~~~~g~~~~~~s~~l-~~~-~~Gga~~p~l~G~--~~d~~~~~~~~~~~~~~~~~~~~~~~~ 404 (410)
T TIGR00885 332 SAFMSLMFPTIYGIALKGLGQDTKYGAAGL-VMA-IIGGGIVPPLQGF--IIDMKEIAAAPAVNTSFILPLLCFAVI 404 (410)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHH-HhccchHHHHHHH--HHHHhcccccCccchHHHHHHHHHHHH
Confidence 888888889999999999987664333333 233 2666666544433 3332 1 4677777765554443
No 217
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.13 E-value=2.4e-05 Score=65.69 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHH
Q 008603 18 QGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVY 97 (560)
Q Consensus 18 ~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~ 97 (560)
.|+.++.++|++|.++++.++ +.++.|++.+..++|+.+|.+....+.++..+++.+..+.++.+++.+.|++.++++
T Consensus 4 mGigRFayTplLP~M~~~~~l--s~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADGGL--SLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred hhhHHHHHHhHhHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 577888999999999999999 889999999999999999999999999998889999999999999999999988876
Q ss_pred HHH
Q 008603 98 VLL 100 (560)
Q Consensus 98 ~li 100 (560)
.+.
T Consensus 82 ~w~ 84 (85)
T PF06779_consen 82 LWS 84 (85)
T ss_pred HHh
Confidence 543
No 218
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.13 E-value=8.6e-05 Score=84.87 Aligned_cols=156 Identities=15% Similarity=0.152 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHHHHHHHHHHHhhh--------
Q 008603 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVLYFIGGLVMLWSP-------- 94 (560)
Q Consensus 24 ~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr-~GRR~~lli~~ll~ai~~il~~~a~-------- 94 (560)
+.+.++.++.+.++. +.+....+...+....-+..+++|.++|+ +||++.++++.++..++.++++++.
T Consensus 6 m~aiLvlYl~~~lg~--~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~ 83 (654)
T TIGR00926 6 MRTILVLYFLNFLGF--SESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPL 83 (654)
T ss_pred cHHHHHHHHHHHcCC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccch
Confidence 344566777888898 66777778887777778888999999996 6999999999999999998887642
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc---hhhHhhHHHHHHHHHHHHHHHHHHHHHhc-----cccchhHH
Q 008603 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEI---RGLLNTLPQFTGCVGMFLAYCMVFGMSLM-----TAPSWRLM 166 (560)
Q Consensus 95 s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~---RG~~~~l~~~~~~lG~~lg~li~~~l~~~-----~~~~Wr~~ 166 (560)
....++++-.+..+|.|.+-+...+...|.++++. |-....++....++|.+++..+....... ...+|...
T Consensus 84 ~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~a 163 (654)
T TIGR00926 84 HDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLA 163 (654)
T ss_pred HHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHH
Confidence 12345667778888999998999999999998643 55667777778888888875555433211 23479999
Q ss_pred HHHHHHHHHHHHHhh
Q 008603 167 LGVLFIPSLIYFVLT 181 (560)
Q Consensus 167 f~i~ai~~ll~~il~ 181 (560)
|.++++..++.+++.
T Consensus 164 F~i~~i~m~ia~lvf 178 (654)
T TIGR00926 164 FGVPAILMILALIVF 178 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999998888876543
No 219
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.10 E-value=0.00027 Score=77.17 Aligned_cols=135 Identities=19% Similarity=0.262 Sum_probs=102.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh
Q 008603 14 GNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS 93 (560)
Q Consensus 14 ~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a 93 (560)
.+++........+....|+. +++++.+.....+.......+.+++.++...+++|+|+|+++.++.++.+++.+++.+.
T Consensus 244 ~~l~~~~~~~i~~s~~~yy~-~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~ 322 (467)
T COG2211 244 MNLLLFIAFNIRGSIMVYYV-TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFT 322 (467)
T ss_pred HHHHHHHHHHHHhhhhheeE-EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhh
Confidence 34444444444444555433 23444467777888888888888889999999999999999999999999999998886
Q ss_pred h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-------cchhhHhhHHHHHHHHHHHHHH
Q 008603 94 P--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPP-------EIRGLLNTLPQFTGCVGMFLAY 149 (560)
Q Consensus 94 ~--s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~-------~~RG~~~~l~~~~~~lG~~lg~ 149 (560)
+ +...+++..++.+++.+...+..+++++|...- +.-|...+...+..=+|..++.
T Consensus 323 ~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~ 387 (467)
T COG2211 323 PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAG 387 (467)
T ss_pred cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHH
Confidence 6 788888899999999999999999999887542 3336677777776666666654
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.09 E-value=1.3e-08 Score=110.06 Aligned_cols=164 Identities=21% Similarity=0.225 Sum_probs=103.9
Q ss_pred HHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH--h---hhh-----
Q 008603 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML--W---SPN----- 95 (560)
Q Consensus 26 ~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~--~---a~s----- 95 (560)
....+.+.++.+.+. . -+......+..+++.+++..+.||+|||+.++++.++.+++.+.++ . .++
T Consensus 273 ~~~~~~i~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 273 FYYSPSIFENAGISN--S--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred ccccccccccccccc--c--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 334566677777633 3 2222333344556677777999999999999999888887777664 1 111
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHH
Q 008603 96 VYVLLLAR-LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPS 174 (560)
Q Consensus 96 ~~~lii~R-~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ 174 (560)
...+.... +...++.+ ..+..+.+.+|.+|.+.|.+..++......++.++++.... ...+..+-...|.+.+++.
T Consensus 349 ~~~i~~~~l~~~~~~~g-~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~--~~~~~~~~~~~~~i~~~~~ 425 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLG-WGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFP--YLFNNLGGWGVFLIFAGVC 425 (451)
T ss_pred cccceeeeecccccccc-ccccccccccccccccccccccccccccccccccccccccc--cccccccccccchhhHHHH
Confidence 22222122 11222222 23556688899999999999999998888888777643322 2222222234566666777
Q ss_pred HHHHHhhheeccCChhhhhhhcchHHHH
Q 008603 175 LIYFVLTIFYLPESPRWLVSKGRMLEAK 202 (560)
Q Consensus 175 ll~~il~~~~lpEsP~~L~~~gr~~ea~ 202 (560)
++..++.++++||| +++..++.
T Consensus 426 ~i~~i~~~~~lpET------~g~~l~ei 447 (451)
T PF00083_consen 426 LIAIIFVYFFLPET------KGKTLEEI 447 (451)
T ss_pred HHHHhheeEEEeeC------CCCCHHHH
Confidence 77777788999999 67665543
No 221
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.07 E-value=5.2e-05 Score=83.33 Aligned_cols=174 Identities=17% Similarity=0.223 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---------hHHHH
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR---------RPMLI 77 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GR---------R~~ll 77 (560)
++++.++.+...+....+...+| |+++-+|+ +-.+.|+..+...+...+..+++|.++||+=+ |..-.
T Consensus 260 vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f--~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 260 VWAIWISAFGGNWGFYLLLTYLPTYLKEVLGF--DVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCC--ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 45566666666676667766676 67788999 66999999999999999999999999998744 33334
Q ss_pred HHHHHHHHHHHHHHhhhh--H----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHH
Q 008603 78 VSSVLYFIGGLVMLWSPN--V----YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (560)
Q Consensus 78 i~~ll~ai~~il~~~a~s--~----~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li 151 (560)
++....+++.+++++.+. . ..+.+.-.+.|+..+++... .-...++.-+.++++.+....+..++++.+
T Consensus 338 i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~-----~~~~apq~a~~l~g~~~~~~~~~~~~~P~~ 412 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN-----HQDIAPQHAGFVMGIINFVGALAGFIAPLL 412 (466)
T ss_pred HHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh-----hhhccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455555555555555542 1 22222223333333333221 112156778999999999999999998665
Q ss_pred HHHHHhc-cccchhHHHHHHHHHHHHHHHhhheeccCC
Q 008603 152 VFGMSLM-TAPSWRLMLGVLFIPSLIYFVLTIFYLPES 188 (560)
Q Consensus 152 ~~~l~~~-~~~~Wr~~f~i~ai~~ll~~il~~~~lpEs 188 (560)
....... +...||.+|++.+++.++..++..++....
T Consensus 413 vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e 450 (466)
T KOG2532|consen 413 VGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGE 450 (466)
T ss_pred eeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCc
Confidence 5333321 234899999999999998876655554433
No 222
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.04 E-value=4.3e-05 Score=84.07 Aligned_cols=151 Identities=13% Similarity=0.115 Sum_probs=113.0
Q ss_pred HHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHH
Q 008603 34 REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW----------SPNVYVLLLAR 103 (560)
Q Consensus 34 ~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~----------a~s~~~lii~R 103 (560)
+.+|. ++...|++.....++.+++..+.+.+.+|++.|+++.++.++.+++.+...+ .++.+.++..-
T Consensus 281 ~~lG~--s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~ 358 (468)
T TIGR00788 281 QCLPG--GPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDS 358 (468)
T ss_pred ccCCC--CcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehh
Confidence 45677 8899999999999999999999999999999999999999998887755431 13344555667
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc-----cccchhH-HHHHHHHHHHHH
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM-----TAPSWRL-MLGVLFIPSLIY 177 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~-----~~~~Wr~-~f~i~ai~~ll~ 177 (560)
++.+++.+........++++..|++.+|+..++.+...++|..++......+... ++.+.++ ...++.++.++.
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 8889999999899999999999999999999999999999999986544333211 1122222 234444444444
Q ss_pred HHhhheeccC
Q 008603 178 FVLTIFYLPE 187 (560)
Q Consensus 178 ~il~~~~lpE 187 (560)
..+ .+++|+
T Consensus 439 l~~-~~llP~ 447 (468)
T TIGR00788 439 LPL-LHLLPR 447 (468)
T ss_pred HHH-HHhCCC
Confidence 444 347786
No 223
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.03 E-value=0.00024 Score=78.74 Aligned_cols=136 Identities=15% Similarity=0.184 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCChH-------HHHHHHHHHHHHHHHHH-----hh-----hhHHHHHHHHHHHHHH
Q 008603 47 LIVAMSLIGATCITTCSGAIADWLGRRP-------MLIVSSVLYFIGGLVML-----WS-----PNVYVLLLARLLDGFG 109 (560)
Q Consensus 47 li~s~~~lG~iig~~~~G~LsDr~GRR~-------~lli~~ll~ai~~il~~-----~a-----~s~~~lii~R~l~G~g 109 (560)
.+.+...+..++..++.+.+.||++||+ -+.+++++.+++.+.++ ++ .+++.++..-++.|+|
T Consensus 313 ~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~G 392 (489)
T PRK10207 313 SFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG 392 (489)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHH
Confidence 3444444566788888999999999886 36667777666654321 21 3567788889999999
Q ss_pred HHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc--------cccchhHHHHHHHHHHHHHHHhh
Q 008603 110 IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM--------TAPSWRLMLGVLFIPSLIYFVLT 181 (560)
Q Consensus 110 ~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~--------~~~~Wr~~f~i~ai~~ll~~il~ 181 (560)
.+...+....++.+.+|++.+|.++++......+|..++..+.-..... ......+.|...++..++..++.
T Consensus 393 e~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~ 472 (489)
T PRK10207 393 ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVM 472 (489)
T ss_pred HHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988888888875444222110 01134567777777666655543
Q ss_pred h
Q 008603 182 I 182 (560)
Q Consensus 182 ~ 182 (560)
+
T Consensus 473 ~ 473 (489)
T PRK10207 473 A 473 (489)
T ss_pred H
Confidence 3
No 224
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.02 E-value=7e-07 Score=99.76 Aligned_cols=180 Identities=19% Similarity=0.229 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
+..++..+++....+.....++.+.+.|++ +.++.|++.+.+-++.++..++..++..|..|-+.+-++.++++++.+
T Consensus 6 ~~~~~~~~~q~~~~g~~~~~lttiErRF~l--~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~ 83 (539)
T PF03137_consen 6 VFLCLLGLFQMMVSGYVNSSLTTIERRFGL--SSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSL 83 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHH
Confidence 344555556666666677788899999999 779999999999999999999999999998788999999999999998
Q ss_pred HHHhh------------h--------------------------------------hHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 89 VMLWS------------P--------------------------------------NVYVLLLARLLDGFGIGLAVTLVP 118 (560)
Q Consensus 89 l~~~a------------~--------------------------------------s~~~lii~R~l~G~g~G~~~~~~~ 118 (560)
++++- . -+..++++.++.|+|....++...
T Consensus 84 l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~ 163 (539)
T PF03137_consen 84 LFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGI 163 (539)
T ss_dssp --------------------------------------------------------------------SSS---------
T ss_pred HHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCcccee
Confidence 87640 0 036778889999999999999999
Q ss_pred HHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh----------------cccc----chhHHHHHHHHHHHHHH
Q 008603 119 IYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL----------------MTAP----SWRLMLGVLFIPSLIYF 178 (560)
Q Consensus 119 ~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~----------------~~~~----~Wr~~f~i~ai~~ll~~ 178 (560)
+|+-|..+++.-+...++......+|..+|+++...... .+.+ .|-.-|.+.+++.++..
T Consensus 164 tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~a 243 (539)
T PF03137_consen 164 TYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSA 243 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888766543321 0112 35556666777766665
Q ss_pred HhhheeccCChh
Q 008603 179 VLTIFYLPESPR 190 (560)
Q Consensus 179 il~~~~lpEsP~ 190 (560)
+...+|-++.|.
T Consensus 244 ipl~~FPk~lp~ 255 (539)
T PF03137_consen 244 IPLFFFPKKLPG 255 (539)
T ss_dssp ------------
T ss_pred HHHHcCCccCCC
Confidence 554444334443
No 225
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.01 E-value=0.00066 Score=71.38 Aligned_cols=161 Identities=18% Similarity=0.205 Sum_probs=122.6
Q ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhhhHHHHH
Q 008603 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPNVYVLL 100 (560)
Q Consensus 22 ~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-GRR~~lli~~ll~ai~~il~~~a~s~~~li 100 (560)
.++....+|.|..|-|+ ++.+.|...+...+..+..++....+.+|. .+|+..+...+++.++.+.+.+.+.-..+.
T Consensus 224 ~Y~~~~WLP~ili~~G~--sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~l 301 (395)
T COG2807 224 YYIVIGWLPAILIDRGL--SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPIL 301 (395)
T ss_pred HHHHHHHHHHHHHHcCC--CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 34455668999999999 889999999999999999999999999965 688888888888888888888876543333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCC-cchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 101 LARLLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 101 i~R~l~G~g~G~~~~~~~~~isE~~p~-~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
- -++.|++.|..++.+..++...++. ++-+...++.|..+.+=..++|.+...+.. ..-+|+..+...+...++..+
T Consensus 302 w-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhD-a~gsw~~~~~~l~~~~i~m~i 379 (395)
T COG2807 302 W-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHD-ATGSWSAPLVLLALATLLMLI 379 (395)
T ss_pred H-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHH-hcCChHHHHHHHHHHHHHHHH
Confidence 3 4899999999999999999887764 555667777776666666666544432222 244899998888888888776
Q ss_pred hhheecc
Q 008603 180 LTIFYLP 186 (560)
Q Consensus 180 l~~~~lp 186 (560)
..+..-|
T Consensus 380 ~Gl~a~r 386 (395)
T COG2807 380 FGLRAGR 386 (395)
T ss_pred HHhhcch
Confidence 6555443
No 226
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.98 E-value=0.0011 Score=73.14 Aligned_cols=142 Identities=8% Similarity=-0.002 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHHHHHhhhh---------------------HHHHHHHHHH
Q 008603 48 IVAMSLIGATCITTCSGAIADWLGR-RPMLIVSSVLYFIGGLVMLWSPN---------------------VYVLLLARLL 105 (560)
Q Consensus 48 i~s~~~lG~iig~~~~G~LsDr~GR-R~~lli~~ll~ai~~il~~~a~s---------------------~~~lii~R~l 105 (560)
....+.+...+.+++..++++++|+ |+...++.++.+++.+.+.+..+ .+..++.-.+
T Consensus 310 ~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 389 (477)
T TIGR01301 310 GLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAI 389 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHH
Confidence 3344444555777788899999994 77778888888888777765443 3677778889
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC--cchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhe
Q 008603 106 DGFGIGLAVTLVPIYISETAPP--EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (560)
Q Consensus 106 ~G~g~G~~~~~~~~~isE~~p~--~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~ 183 (560)
.|+..+.....-++++++..|+ +..|..+++.+.+..+.+++..+...........+-..++.+.++..++..++.++
T Consensus 390 ~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~ 469 (477)
T TIGR01301 390 LGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALI 469 (477)
T ss_pred hhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999995 45599999999999999888765333322222224566888999999999998888
Q ss_pred eccCCh
Q 008603 184 YLPESP 189 (560)
Q Consensus 184 ~lpEsP 189 (560)
.+|.+|
T Consensus 470 ~~~~~~ 475 (477)
T TIGR01301 470 LLPRPR 475 (477)
T ss_pred hCCCCC
Confidence 898764
No 227
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.98 E-value=0.00053 Score=76.06 Aligned_cols=132 Identities=27% Similarity=0.310 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHH---HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh
Q 008603 55 GATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVY---VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRG 131 (560)
Q Consensus 55 G~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~---~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG 131 (560)
-...+....+.+.|++|||..+..+.++..++.++.++.+... ...+...+..++.+.....+..+.+|.+|...|.
T Consensus 362 ~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~ 441 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRN 441 (521)
T ss_pred HHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 4455556668999999999999999999999999998876443 3566666666777777777799999999999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 132 LLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 132 ~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
.+.+....+..+|.++++.+...... ....+.... .+....+..++..+++||+.
T Consensus 442 ~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~--~~~~~~l~~~~~~~~lpet~ 496 (521)
T KOG0255|consen 442 TAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLIL--FGWLALLLGLLSLLLLPETK 496 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHH--HHHHHHHHHHHHHhcCcccC
Confidence 99999999999999998766643332 222232222 34455555555668899984
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.96 E-value=4.2e-05 Score=83.58 Aligned_cols=159 Identities=17% Similarity=0.138 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHH
Q 008603 18 QGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVY 97 (560)
Q Consensus 18 ~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~ 97 (560)
.|.....+...+-.-.++++. .+...|........|-++.-++.+++..++|+-+++..++...++=.+..++..|.|
T Consensus 383 mG~g~~lv~tFLfWHled~~~--~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W 460 (618)
T KOG3762|consen 383 MGAGVGLVFTFLFWHLEDLGG--IKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPW 460 (618)
T ss_pred HHHHHHHHHHHHHHHHhhcCC--cceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCch
Confidence 333333333334344677776 778889888888899999999999999999999999999999888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHH-HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 008603 98 VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTG-CVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLI 176 (560)
Q Consensus 98 ~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~-~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll 176 (560)
+.+..-+++|+..+..+.++-.|++..+|++.|..+.++.+... .+|-.+|.+++ .......+-|..|.++++.+++
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIG--G~~v~~fg~~ttf~~~giAcl~ 538 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIG--GFVVERFGARTTFRIFGIACLV 538 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhh--hhhheeehhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987764 45555553333 3334456778888888887777
Q ss_pred HHHh
Q 008603 177 YFVL 180 (560)
Q Consensus 177 ~~il 180 (560)
.+++
T Consensus 539 ~l~~ 542 (618)
T KOG3762|consen 539 TLAL 542 (618)
T ss_pred HHHH
Confidence 6554
No 229
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.95 E-value=0.00018 Score=78.37 Aligned_cols=158 Identities=20% Similarity=0.289 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh---C--ChHHHHHHHHHHHHHHHHHHhh----hh
Q 008603 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL---G--RRPMLIVSSVLYFIGGLVMLWS----PN 95 (560)
Q Consensus 25 ~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~---G--RR~~lli~~ll~ai~~il~~~a----~s 95 (560)
.....|++++++|+ ++++.....+...+.. ...++.|.++|.+ | ||+-++++.++.+++.+.++.. .+
T Consensus 9 ~~~~~~~l~~~l~l--s~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s 85 (433)
T PF03092_consen 9 RLAIYPFLKDDLGL--SPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESS 85 (433)
T ss_pred HHHHHHHHHHHcCC--CHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccch
Confidence 34567889999999 8898888888877764 4678899999975 4 5666777777776666666553 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Q 008603 96 VYVLLLARLLDGFGIGLAVTLVPIYISETAP--PEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIP 173 (560)
Q Consensus 96 ~~~lii~R~l~G~g~G~~~~~~~~~isE~~p--~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~ 173 (560)
.....+.-++..++.......+-.+++|... ++.||...+....+..+|.+++..+. ....+..+++..|.+.+++
T Consensus 86 ~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~--G~l~~~~~~~~~f~i~~~~ 163 (433)
T PF03092_consen 86 AAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLS--GPLLDSFGPQGVFLISAAL 163 (433)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhh--hhhhhcCCCeEEehHHHHH
Confidence 6666777788889999999999999999983 33478888888888889998885444 4445566888899888888
Q ss_pred HHHHHHhhheeccC
Q 008603 174 SLIYFVLTIFYLPE 187 (560)
Q Consensus 174 ~ll~~il~~~~lpE 187 (560)
.++..+..+++.+|
T Consensus 164 ~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 164 PLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHhhhh
Confidence 88776666666665
No 230
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.83 E-value=0.00061 Score=73.34 Aligned_cols=160 Identities=14% Similarity=0.176 Sum_probs=123.1
Q ss_pred HHHHHHHHHH-cCCCCChHHH-HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Q 008603 26 AGAVLYIKRE-FHLETEPTIE-GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLAR 103 (560)
Q Consensus 26 ~~~lp~i~~~-~gls~s~~~~-gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R 103 (560)
..+.|++.+. .|+ +..+. .-+.-...-.++...++...+.|.++.|++++++.+...+..+++.+.++...+-+.-
T Consensus 24 Pfl~~yL~~~~kn~--T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q 101 (412)
T PF01770_consen 24 PFLTPYLTGPDKNF--TEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQ 101 (412)
T ss_pred ccchHHHcCCccCC--CHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHH
Confidence 3356676665 677 54544 3455556667778888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhe
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIF 183 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~ 183 (560)
++.|++.+.- .+.+.|+-...|+++--++.+.......+|.+++.+++-.+......+++..+++......+.+++ .+
T Consensus 102 ~~yg~~~a~e-vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~-~~ 179 (412)
T PF01770_consen 102 FFYGLATAAE-VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLI-AL 179 (412)
T ss_pred HHHHHHHHHH-HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HH
Confidence 9999998875 777889988899988888888888877777777766665555556667777776666655554444 45
Q ss_pred eccCCh
Q 008603 184 YLPESP 189 (560)
Q Consensus 184 ~lpEsP 189 (560)
++|..+
T Consensus 180 fLP~~~ 185 (412)
T PF01770_consen 180 FLPMPK 185 (412)
T ss_pred HcCCCC
Confidence 566544
No 231
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.80 E-value=3.3e-06 Score=85.45 Aligned_cols=150 Identities=13% Similarity=0.103 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHHHHH
Q 008603 4 AALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW-LGRRPMLIVSSVL 82 (560)
Q Consensus 4 ~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr-~GRR~~lli~~ll 82 (560)
+.+.++.+|+-.|-..+-.-....+-.+++.+.++ +.++..++.+.+..-.++-.+++|++.|| +|-|...++-++.
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni--~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~f 119 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNI--EYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIF 119 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhccccc--ceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHH
Confidence 34444445544444444344444556677888888 55788899999999999999999999996 6888777776777
Q ss_pred HHHHHHHHH---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 83 YFIGGLVML---WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 83 ~ai~~il~~---~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
..++-++.+ +.+.+|+++++||+.|+|.-...++...|+..++..|+-+.++++......+|..+...++..+
T Consensus 120 v~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 120 VFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 777777665 4678999999999999998877788889999999999999999998888888887664444433
No 232
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.76 E-value=0.0038 Score=66.80 Aligned_cols=150 Identities=14% Similarity=0.084 Sum_probs=120.3
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh-hhCChHHHHHHHHHHHHHHHHHHh---hhhHHHHHHHHH
Q 008603 29 VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-WLGRRPMLIVSSVLYFIGGLVMLW---SPNVYVLLLARL 104 (560)
Q Consensus 29 lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD-r~GRR~~lli~~ll~ai~~il~~~---a~s~~~lii~R~ 104 (560)
=||=.+-||+ +..+...++.....|..++..+.|.+.. |.++++...+++.+.+++..+..+ ..+.+.+...-+
T Consensus 232 EPygg~Vfgm--sv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~ 309 (403)
T PF03209_consen 232 EPYGGEVFGM--SVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVF 309 (403)
T ss_pred CCchhHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 4677888999 7799999999999999999999998877 678888888888888877766554 457889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHH-----h---ccccchhHHHHHHHHHHHH
Q 008603 105 LDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-----L---MTAPSWRLMLGVLFIPSLI 176 (560)
Q Consensus 105 l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~-----~---~~~~~Wr~~f~i~ai~~ll 176 (560)
+.|++.|.+.+..-..+.++.++++-|..++.......+...++.+...... . .+..+|-.+|.+.++.-++
T Consensus 310 l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~ 389 (403)
T PF03209_consen 310 LLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLA 389 (403)
T ss_pred HHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999988888777776644443322 1 1334677788887777666
Q ss_pred HHHh
Q 008603 177 YFVL 180 (560)
Q Consensus 177 ~~il 180 (560)
..++
T Consensus 390 a~~l 393 (403)
T PF03209_consen 390 ALVL 393 (403)
T ss_pred HHHH
Confidence 5443
No 233
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.75 E-value=0.00029 Score=58.08 Aligned_cols=71 Identities=14% Similarity=0.151 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 11 AAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 11 ~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
+...+|+.+...+...|.+|.+.++.|+ ++.+.|++.++..+..++++++.|.++||++|++.++....++
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl--~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGL--SPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4455666667777788888888888999 8899999999999999999999999999999988877665543
No 234
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.68 E-value=0.0048 Score=66.50 Aligned_cols=147 Identities=10% Similarity=0.032 Sum_probs=84.7
Q ss_pred HHHHHHH-HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH-----hhhhHH
Q 008603 24 TIAGAVL-YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML-----WSPNVY 97 (560)
Q Consensus 24 ~~~~~lp-~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~-----~a~s~~ 97 (560)
......| ++++.+|. ++.+.++.......+.+++..+.+.+.++..+++.+.....+..++.+++. ..+++.
T Consensus 236 ~~~~~~P~~l~~~~g~--s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~ 313 (413)
T PRK15403 236 SWVAVSPVILIDAGGM--TTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWL 313 (413)
T ss_pred HHHHhChHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHH
Confidence 3333456 45566788 789999998888888888888888876554444433322222223332222 123444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 008603 98 VLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLI 176 (560)
Q Consensus 98 ~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll 176 (560)
.+++..++.+++.+...+......- .-....+|++.++.+.....+..++....- +.... +-+..|...+++..+
T Consensus 314 ~~~~~~~l~~~G~~~~~p~~~~~al-~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g--~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 314 WSVLGTSLYAFGIGLIFPTLFRFTL-FSNNLPKGTVSASLNMVILMVMAVSVEIGR--WLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHh-ccCCCCCcHHHHHHHHHHHHHHHHHHHHHH--HHHHc-CCchHHHHHHHHHHH
Confidence 4567788888888888776664322 222334788888887777666666644332 22111 334455444444333
No 235
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.64 E-value=0.00045 Score=76.48 Aligned_cols=125 Identities=15% Similarity=0.111 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh----hCChHHHHHHHHH
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADW----LGRRPMLIVSSVL 82 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp~i~~~-~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr----~GRR~~lli~~ll 82 (560)
++..+++.++....+..+...+|.+.++ .+. +..+..++.....++.+++.+++|.++|| ..+|........+
T Consensus 275 vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~--s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 275 VWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGY--SELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCL 352 (495)
T ss_pred HHHHHHHHHHHhhccccHHHHHHHHHHcCCCc--ChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 4566777788888888888888877776 456 77899999999999999999999999999 6677666666655
Q ss_pred HHHHH-HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHh
Q 008603 83 YFIGG-LVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLN 134 (560)
Q Consensus 83 ~ai~~-il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~ 134 (560)
+.+.. +.+.+..+......+-+....+.+...+++..+.++...++.|....
T Consensus 353 ~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k~~~~ 405 (495)
T KOG2533|consen 353 YAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTKALTT 405 (495)
T ss_pred HHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHHhHHH
Confidence 55544 44444443444444445555666777788888888888776654433
No 236
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.53 E-value=0.006 Score=65.10 Aligned_cols=157 Identities=11% Similarity=0.038 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH
Q 008603 13 IGNLLQGWDNATIAGAVLYIKRE-FHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML 91 (560)
Q Consensus 13 l~~fl~g~~~~~~~~~lp~i~~~-~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~ 91 (560)
++.|++--...+....++.+..+ .|+ ++.+.....+.+..+.++|++++.++..|+-..+.+.+.++...+-++..+
T Consensus 243 l~~FlYVG~Eva~gsfl~~y~~~~~g~--~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~ 320 (422)
T COG0738 243 LAIFLYVGAEVAIGSFLVSYLEELLGL--NEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVA 320 (422)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHhcCCc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 34444333344445555554555 777 789999999999999999999999999999999999999988888888888
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHH
Q 008603 92 WSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLF 171 (560)
Q Consensus 92 ~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~a 171 (560)
++++...+ .+-+++|+..+..+|...+...+..| +.-....++.-+. .+|..+.|.+. ....+..+-...+.+..
T Consensus 321 l~~g~v~~-~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l~ma-ivGGAiiP~l~--G~i~d~~g~~~~~~~~p 395 (422)
T COG0738 321 LIGGVVAL-YALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLLVMA-IVGGAIIPPLQ--GVIADMFGIQLTFLIVP 395 (422)
T ss_pred HhcChHHH-HHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceeeeeh-eecchHHHHHH--HHHHHhhhhHHHHHHHH
Confidence 88885544 45678899999999999999999999 4444444444343 34444443222 34445555555555333
Q ss_pred HHHHH
Q 008603 172 IPSLI 176 (560)
Q Consensus 172 i~~ll 176 (560)
.++.+
T Consensus 396 llc~l 400 (422)
T COG0738 396 LLCYL 400 (422)
T ss_pred HHHHH
Confidence 33333
No 237
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.51 E-value=0.00027 Score=75.00 Aligned_cols=155 Identities=17% Similarity=0.168 Sum_probs=118.1
Q ss_pred HHHHHHHHH-HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 008603 23 ATIAGAVLY-IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG--RRPMLIVSSVLYFIGGLVMLWSPNVYVL 99 (560)
Q Consensus 23 ~~~~~~lp~-i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G--RR~~lli~~ll~ai~~il~~~a~s~~~l 99 (560)
...-|.++. +.+.+.. +..+.|++.--..+.+.+++.+.|.++||++ |......+.++..++.....+++++..+
T Consensus 287 afLePtlslwm~e~m~~--p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L 364 (464)
T KOG3764|consen 287 AFLEPTLSLWMLETMFT--PGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQL 364 (464)
T ss_pred HHhCcccHHHHHHhccC--CCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHH
Confidence 334445554 5666764 4568888888888999999999999999999 6555556666666666777789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCC---c---chhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPP---E---IRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIP 173 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~---~---~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~ 173 (560)
++-++..+++.+...+.....+.+.... + .-|...++.+.++++|..++ +.++.......+++|.-.+.++.
T Consensus 365 ~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~G--P~~gg~iv~~iGF~wl~~iig~~ 442 (464)
T KOG3764|consen 365 WVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIG--PTFGGSLVEAIGFEWLMTIIGIL 442 (464)
T ss_pred hhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhcc--ccccchheeehhHHHHHHHHHHH
Confidence 9999999999888766655544444433 3 55788889999999999999 55556677788999998888888
Q ss_pred HHHHHHhh
Q 008603 174 SLIYFVLT 181 (560)
Q Consensus 174 ~ll~~il~ 181 (560)
.+++..+.
T Consensus 443 n~iyapvl 450 (464)
T KOG3764|consen 443 NLIYAPVL 450 (464)
T ss_pred HHHHHHHH
Confidence 88876543
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.49 E-value=0.0036 Score=70.70 Aligned_cols=145 Identities=19% Similarity=0.096 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCCC-hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH-HHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKR-EFHLETE-PTIEGLIVAMSLIGATCITTCSGAIADWLGRRP-MLIVSSVLYFIG 86 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~-~~gls~s-~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~-~lli~~ll~ai~ 86 (560)
+..+..|+.+........+.|.... -|+-+.. ....++......++..++.++.|.+.-+++|-| .++++.+++.++
T Consensus 314 ~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~ 393 (599)
T PF06609_consen 314 ALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAF 393 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHH
Confidence 3345556666656665566665433 3444211 135678888888899999999999998887554 445676666665
Q ss_pred HHHHHh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 87 GLVMLW--SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 87 ~il~~~--a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
+-+++. .+|....+..-++.|++.|.......+...-..|.+.-|.+.++......+|..+++.+...
T Consensus 394 ~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 394 CGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 555544 23555556777899999999888887777778899999999999999888888887665543
No 239
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.48 E-value=0.00048 Score=78.57 Aligned_cols=182 Identities=19% Similarity=0.226 Sum_probs=146.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHH
Q 008603 7 VAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIG 86 (560)
Q Consensus 7 i~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~ 86 (560)
.++++++..+.+++....+...+..+.+.|++ +.++.|++.+.+-+|..+...+..+..-|.-|-+++-+++++++++
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i--~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lg 175 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRFKI--SSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLG 175 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCC--CCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHH
Confidence 44556667777777777777788899999999 6688999999999999999999999999988889999999999999
Q ss_pred HHHHHhh--------------------h--------------------------------hHHHHHHHHHHHHHHHHHHH
Q 008603 87 GLVMLWS--------------------P--------------------------------NVYVLLLARLLDGFGIGLAV 114 (560)
Q Consensus 87 ~il~~~a--------------------~--------------------------------s~~~lii~R~l~G~g~G~~~ 114 (560)
.+++++- + -+..++++.++.|+|....+
T Consensus 176 sll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~ 255 (735)
T KOG3626|consen 176 SLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIF 255 (735)
T ss_pred HHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCc
Confidence 9988651 0 02367778899999999999
Q ss_pred HHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh--ccc-----------c----chhHHHHHHHHHHHHH
Q 008603 115 TLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL--MTA-----------P----SWRLMLGVLFIPSLIY 177 (560)
Q Consensus 115 ~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~--~~~-----------~----~Wr~~f~i~ai~~ll~ 177 (560)
+...+|+-|....++-....++...+..+|.++|++++-.+.- .+. + .|..-|.+++.+.++.
T Consensus 256 tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~ 335 (735)
T KOG3626|consen 256 TLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFS 335 (735)
T ss_pred cCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998776655431 111 1 4777888888888887
Q ss_pred HHhhheeccCChh
Q 008603 178 FVLTIFYLPESPR 190 (560)
Q Consensus 178 ~il~~~~lpEsP~ 190 (560)
.+..++|-++.|+
T Consensus 336 a~p~f~fPk~lp~ 348 (735)
T KOG3626|consen 336 AVPLFFFPKELPK 348 (735)
T ss_pred HHHHHhCcccCcc
Confidence 7765555445553
No 240
>PTZ00207 hypothetical protein; Provisional
Probab=97.45 E-value=0.0032 Score=71.17 Aligned_cols=165 Identities=11% Similarity=0.148 Sum_probs=111.1
Q ss_pred HHHHHHHHHHc-CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--------ChHHHHHHHHHHHHHHHHHHhhhhH
Q 008603 26 AGAVLYIKREF-HLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG--------RRPMLIVSSVLYFIGGLVMLWSPNV 96 (560)
Q Consensus 26 ~~~lp~i~~~~-gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G--------RR~~lli~~ll~ai~~il~~~a~s~ 96 (560)
..-+-+|.+.+ |.+.+.+...+.++...++..+|++.+|.++...- +|+..+....++.++.++++++-..
T Consensus 373 ~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~lll~~~~p~ 452 (591)
T PTZ00207 373 IFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITMLTLFLTLPK 452 (591)
T ss_pred eecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHCCc
Confidence 33456777888 55222211223778888899999999998883222 2233333333366666666665444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHh-ccc-----------cchh
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSL-MTA-----------PSWR 164 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~-~~~-----------~~Wr 164 (560)
..+.+.-++.|++.|...++....++|+|. |+-|+...+......+|..+-.....+... .+. .=.|
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~ 531 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVV 531 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeH
Confidence 689999999999999999999999999999 999998888888888887764333333221 110 0167
Q ss_pred HHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 165 LMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 165 ~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
..|.+.+.++++.+++...+.-++.++
T Consensus 532 ~~~~v~~~~~~~g~~~s~~l~~R~r~~ 558 (591)
T PTZ00207 532 MPLAFLLGLSFLAFITSTYVHLQYRRL 558 (591)
T ss_pred hHHHHHHHHHHHHHHHHhheeeehHHH
Confidence 899999999988877665554455433
No 241
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.35 E-value=0.0047 Score=67.58 Aligned_cols=106 Identities=22% Similarity=0.228 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 008603 49 VAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE 128 (560)
Q Consensus 49 ~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~ 128 (560)
.++.+....+..++.+.+.|++|+|..+.++...+....+...+ +|-+.+++.-.+.|+|.+..++..-.|++|..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 56667778889999999999999999999999998887776665 45667788899999999998899999999999999
Q ss_pred chhhHhhHHHHHHHHHHHHHHHHHHHH
Q 008603 129 IRGLLNTLPQFTGCVGMFLAYCMVFGM 155 (560)
Q Consensus 129 ~RG~~~~l~~~~~~lG~~lg~li~~~l 155 (560)
.+.+..++.-.....+.++|....+..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~ 161 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIY 161 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheee
Confidence 999999998888888888875554433
No 242
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.95 E-value=0.0016 Score=70.33 Aligned_cols=125 Identities=14% Similarity=0.218 Sum_probs=96.3
Q ss_pred HHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh----hhCCh-HHHHHHHHHHHHHHHHHHhhhhH----
Q 008603 26 AGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD----WLGRR-PMLIVSSVLYFIGGLVMLWSPNV---- 96 (560)
Q Consensus 26 ~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD----r~GRR-~~lli~~ll~ai~~il~~~a~s~---- 96 (560)
..++|.+...+|+ .....+.+-...-+..++.+++.|..+| |+||| +.+..+.++.+++.+++.++.++
T Consensus 52 lsy~tPyl~~lGv--phk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~l 129 (498)
T KOG0637|consen 52 LSYLTPYLQSLGV--PHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLL 129 (498)
T ss_pred hccccHHHHHcCC--CcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHh
Confidence 3356666778998 5577777776777777889999999999 58966 56677778888888888876543
Q ss_pred -------------HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh-HhhHHHHHHHHHHHHHHHHH
Q 008603 97 -------------YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGL-LNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 97 -------------~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~-~~~l~~~~~~lG~~lg~li~ 152 (560)
..++++-.+.=++.......+-++++|....+.+-+ +++++..+..+|..+++...
T Consensus 130 gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g 199 (498)
T KOG0637|consen 130 GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALG 199 (498)
T ss_pred cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecc
Confidence 344444445556666777888999999998877777 99999999999999997766
No 243
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.86 E-value=0.094 Score=58.31 Aligned_cols=137 Identities=12% Similarity=0.097 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCC--h----HH-HHHHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHH
Q 008603 46 GLIVAMSLIGATCITTCSGAIADWLGR--R----PM-LIVSSVLYFIGGLVMLWS---------PNVYVLLLARLLDGFG 109 (560)
Q Consensus 46 gli~s~~~lG~iig~~~~G~LsDr~GR--R----~~-lli~~ll~ai~~il~~~a---------~s~~~lii~R~l~G~g 109 (560)
++..+...+..++.+|+.+++=.|..| | +. +.+++++.+++.+++.++ .+.+.+++..++..+|
T Consensus 311 ~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~g 390 (493)
T PRK15462 311 AMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFA 390 (493)
T ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 445555555566677777777666633 2 11 566777777776666431 2567788899999999
Q ss_pred HHHHHHHHHHHHHhhcCCcchhhHhhHHHHH-HHHHHHHHHHHHHHHHhc----------cccchhHHHHHHHHHHHHH-
Q 008603 110 IGLAVTLVPIYISETAPPEIRGLLNTLPQFT-GCVGMFLAYCMVFGMSLM----------TAPSWRLMLGVLFIPSLIY- 177 (560)
Q Consensus 110 ~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~-~~lG~~lg~li~~~l~~~----------~~~~Wr~~f~i~ai~~ll~- 177 (560)
--...|+...++++.+|++.||+.++..... ..+|..++..+.-..... +...+...|...++.+++.
T Consensus 391 El~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 470 (493)
T PRK15462 391 ELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALACV 470 (493)
T ss_pred HHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998663 357766654333222100 0123556777777777665
Q ss_pred HHhhh
Q 008603 178 FVLTI 182 (560)
Q Consensus 178 ~il~~ 182 (560)
.++.+
T Consensus 471 ~~~~~ 475 (493)
T PRK15462 471 GVVLM 475 (493)
T ss_pred HHHHH
Confidence 44433
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.76 E-value=0.23 Score=54.85 Aligned_cols=129 Identities=8% Similarity=0.067 Sum_probs=89.9
Q ss_pred HHHHHHHHcCCC---CChHHHHHHHHHHHHHHHHH-HHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh--h-------
Q 008603 28 AVLYIKREFHLE---TEPTIEGLIVAMSLIGATCI-TTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS--P------- 94 (560)
Q Consensus 28 ~lp~i~~~~gls---~s~~~~gli~s~~~lG~iig-~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a--~------- 94 (560)
++..++|.+..+ ...+...++-+...+...+. .++.+++++|++|++.+-+....+....++.++. |
T Consensus 25 iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p 104 (472)
T TIGR00769 25 ILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHP 104 (472)
T ss_pred HHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCC
Confidence 366778888762 23355666666665554444 8899999999999998877666665555554442 1
Q ss_pred ----------------------hHHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHH
Q 008603 95 ----------------------NVYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (560)
Q Consensus 95 ----------------------s~~~lii~R~l~G~g~G~~~~-~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li 151 (560)
+.|...+..+...+-.....+ .-+.+++|+++.++-.+..+++....++|..+++.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 105 TALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred cHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444455555555554 678899999999999999999999999999998766
Q ss_pred HHHHH
Q 008603 152 VFGMS 156 (560)
Q Consensus 152 ~~~l~ 156 (560)
...+.
T Consensus 185 ~~~~~ 189 (472)
T TIGR00769 185 IKYFS 189 (472)
T ss_pred HHHHH
Confidence 54443
No 245
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=96.53 E-value=0.046 Score=61.78 Aligned_cols=153 Identities=18% Similarity=0.175 Sum_probs=111.0
Q ss_pred HHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHHHHHHHHHHHHHHHHhhhh-------
Q 008603 24 TIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-GRRPMLIVSSVLYFIGGLVMLWSPN------- 95 (560)
Q Consensus 24 ~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-GRR~~lli~~ll~ai~~il~~~a~s------- 95 (560)
...+++.++..+++. ....+...+..+.-...+..++++.++|-| ||-+++.++.++..++.++..++..
T Consensus 56 ~~~nlv~ylt~~~~~--~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~ 133 (571)
T KOG1237|consen 56 LVSNLVTYLTLELHA--SGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPF 133 (571)
T ss_pred chhHHHHHHHHHhcc--chHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Confidence 346778899999998 446666666666666677778999999975 8999999999998888665544211
Q ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC---Ccc-hh--hHhhHHHHHHHHHHHHHHHH
Q 008603 96 ------------------VYVLLLARLLDGFGIGLAVTLVPIYISETAP---PEI-RG--LLNTLPQFTGCVGMFLAYCM 151 (560)
Q Consensus 96 ------------------~~~lii~R~l~G~g~G~~~~~~~~~isE~~p---~~~-RG--~~~~l~~~~~~lG~~lg~li 151 (560)
...+.....+..+|.|+.-+....+-+|-++ ++. +. ..+.++.+..++|..++ .
T Consensus 134 ~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a--~ 211 (571)
T KOG1237|consen 134 MCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLA--Q 211 (571)
T ss_pred cccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHH--H
Confidence 1345555667777888888888899999998 322 22 55666677778888887 3
Q ss_pred HHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 152 VFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 152 ~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
...++..+..+|.+.|.++.+..++..++
T Consensus 212 t~~vyiq~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 212 TVLVYIQDNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred HHHHhhhhcccceeeccHHHHHHHHHHHH
Confidence 34455667789999998888877665443
No 246
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.25 E-value=0.044 Score=60.38 Aligned_cols=123 Identities=11% Similarity=0.114 Sum_probs=101.6
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHH-HHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q 008603 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSG-AIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFG 109 (560)
Q Consensus 31 ~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G-~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g 109 (560)
+.+..|+. ++.+.+...+...+...++..+.. .+...+|-|+++.+++....+..++.+++.+.|++....++.++.
T Consensus 267 yl~~~f~w--~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 267 YLKAKFGW--NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALA 344 (463)
T ss_pred EEeeecCc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhh
Confidence 45667788 778888777777777777777666 778888988899999999999999999999999999888888776
Q ss_pred HHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHH
Q 008603 110 IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS 156 (560)
Q Consensus 110 ~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~ 156 (560)
.... +..-+.++-+..++++|++.++....-.+..++++.+...++
T Consensus 345 ~~~~-pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 345 GIVF-PAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred cchh-HHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 5554 788889999999999999999999998888888766554443
No 247
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.15 E-value=0.028 Score=59.71 Aligned_cols=105 Identities=15% Similarity=0.279 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh--h-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc---chhhHhhHHHHHH
Q 008603 74 PMLIVSSVLYFIGGLVMLWS--P-------NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPE---IRGLLNTLPQFTG 141 (560)
Q Consensus 74 ~~lli~~ll~ai~~il~~~a--~-------s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~---~RG~~~~l~~~~~ 141 (560)
++++++.+++++|.++..++ + +...++++-++.++|.|+.=+...++++|.++++ +|....+++....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 56788888888888885443 2 2357888899999999999999999999999876 3566777788889
Q ss_pred HHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHh
Q 008603 142 CVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 142 ~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il 180 (560)
++|..++..+. .+..+..+|.+.|+++++..++..+.
T Consensus 82 n~G~~~~~~~~--~~i~~~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 82 NIGSLFSPTLV--PYIQQNYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHHHCC--CHHHHCS-HHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccc--hhhccccchhhhhhHHHHHHHHHHHH
Confidence 99999884433 44556789999999999888876554
No 248
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.15 E-value=0.4 Score=52.74 Aligned_cols=107 Identities=21% Similarity=0.260 Sum_probs=83.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHh---hhCChHHHHHHHHHHHHHHHHHHhh------------------hhHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIAD---WLGRRPMLIVSSVLYFIGGLVMLWS------------------PNVYVL 99 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsD---r~GRR~~lli~~ll~ai~~il~~~a------------------~s~~~l 99 (560)
+....++......+|.+++..+.+.+++ ++||++.+.++.++..+..++.... +++...
T Consensus 277 ~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~ 356 (461)
T KOG3098|consen 277 TTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLA 356 (461)
T ss_pred chhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHH
Confidence 3355566666677788888888888876 5799999999999988887776542 245677
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHH
Q 008603 100 LLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (560)
Q Consensus 100 ii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg 148 (560)
.+.-++.|++-+...+..+.++...+ +++|..+.+++.+-..++..++
T Consensus 357 ~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 357 LIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999 7778888888877777666554
No 249
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.02 E-value=0.25 Score=54.00 Aligned_cols=128 Identities=15% Similarity=0.168 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHH---hhh-------
Q 008603 25 IAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVML---WSP------- 94 (560)
Q Consensus 25 ~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~---~a~------- 94 (560)
..+....+...-|+ ++...|..-+...+..+.++++..++.+|+|..+.=+++...-..+..+.. +.+
T Consensus 277 f~~lmt~yl~~~G~--s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~ 354 (432)
T PF06963_consen 277 FGGLMTAYLKSQGY--SPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSI 354 (432)
T ss_pred CcHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhh
Confidence 34444444445599 889999999999999999999999999999988877776655433332222 221
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 95 s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
+...++.+-.+.=+|.=.+--+..-++.|..|+++||..++.-....++-.++.+.+...
T Consensus 355 s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii 414 (432)
T PF06963_consen 355 SAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTII 414 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 223333333333334444556677789999999999999999888888877777555543
No 250
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=95.79 E-value=0.018 Score=58.40 Aligned_cols=92 Identities=21% Similarity=0.350 Sum_probs=69.9
Q ss_pred HHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 008603 31 YIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGI 110 (560)
Q Consensus 31 ~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~ 110 (560)
++.+.++. .+.++|.+..+-+-..++...+.|.++|+.|||+.++.-++.+.++++ +-.++.+-.++++|.+-|++.
T Consensus 62 yLYstYgF--gkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 62 YLYSTYGF--GKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIAT 138 (454)
T ss_pred eeehhcCc--cCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHH
Confidence 44566776 556777766666666677777888999999999998887777766543 456788999999999999999
Q ss_pred HHHHHHHHHH-HHhhc
Q 008603 111 GLAVTLVPIY-ISETA 125 (560)
Q Consensus 111 G~~~~~~~~~-isE~~ 125 (560)
...+..--.| ++|.-
T Consensus 139 sLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 8877666554 66654
No 251
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.72 E-value=0.15 Score=54.33 Aligned_cols=117 Identities=18% Similarity=0.195 Sum_probs=101.5
Q ss_pred HHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 008603 34 REFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLG--RRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIG 111 (560)
Q Consensus 34 ~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~G--RR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G 111 (560)
..|+. ++.+.|-+.+...++..+.+....+..+|.. -+-.+..+..++....++...+.....+.++-.+-.+..+
T Consensus 290 ~rfg~--ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A 367 (451)
T KOG2615|consen 290 GRFGY--SSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTA 367 (451)
T ss_pred CccCC--ChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHH
Confidence 55677 7899999998888888888888888888876 6667777888888888888888888889999999999999
Q ss_pred HHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 112 LAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 112 ~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
...+....++....|.++||.++|+......++-.+||++.
T Consensus 368 ~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 368 SVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 99899999999999999999999999999999999997665
No 252
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.39 E-value=0.55 Score=51.74 Aligned_cols=136 Identities=18% Similarity=0.177 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCh-------HHHHHHHHHHHHHHHHHHhh----------hhHHHHHHHHHHHHHH
Q 008603 47 LIVAMSLIGATCITTCSGAIADWLGRR-------PMLIVSSVLYFIGGLVMLWS----------PNVYVLLLARLLDGFG 109 (560)
Q Consensus 47 li~s~~~lG~iig~~~~G~LsDr~GRR-------~~lli~~ll~ai~~il~~~a----------~s~~~lii~R~l~G~g 109 (560)
+..+...+.-++..++..++--+++++ .-+.++.+++..+.+++.+. -+.+.++...++++++
T Consensus 328 ~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~g 407 (498)
T COG3104 328 WFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFG 407 (498)
T ss_pred HHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHH
Confidence 444444555566677777777775444 12344555555555555443 2578899999999999
Q ss_pred HHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHH----HHhccccchhHHHHHHHHHHHHHHHhhh
Q 008603 110 IGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG----MSLMTAPSWRLMLGVLFIPSLIYFVLTI 182 (560)
Q Consensus 110 ~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~----l~~~~~~~Wr~~f~i~ai~~ll~~il~~ 182 (560)
-=...++...+++...|+.-.+..++..-.....|..++..+... ....+...-...|+.++...++..+...
T Consensus 408 EL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 408 ELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998888888887776444431 1122223445577777777777655433
No 253
>PRK03612 spermidine synthase; Provisional
Probab=95.16 E-value=3.1 Score=46.74 Aligned_cols=143 Identities=11% Similarity=-0.017 Sum_probs=76.4
Q ss_pred HHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH---HHHHHHHHHhhh----hH-HHHHHHH
Q 008603 32 IKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL---YFIGGLVMLWSP----NV-YVLLLAR 103 (560)
Q Consensus 32 i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll---~ai~~il~~~a~----s~-~~lii~R 103 (560)
+.--+|- +....+.+.+++.+|..+|..+++.+.++.-|+...+ -+.+ ..++..+..... .+ ..++..-
T Consensus 41 l~~~~G~--s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~-e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~ 117 (521)
T PRK03612 41 ASYLLGD--SVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAV-ELLLALLGGLSALILYAAFAFQGLSRLLLYVLV 117 (521)
T ss_pred HHHHhCc--hHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344566 6688899999999999999999888764433332211 1111 111111111111 11 2233344
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFV 179 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~i 179 (560)
++.++..|+..|...-+..+... +.-|...+.......+|.++|.+....+.+ +..+-....++.+.+.++..+
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl-p~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL-PRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH-HhcchHHHHHHHHHHHHHHHH
Confidence 56777788776666555543322 223555667777788888888665544433 333433333344444444443
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.10 E-value=0.3 Score=52.74 Aligned_cols=111 Identities=16% Similarity=0.169 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 42 PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLV---MLWSPNVYVLLLARLLDGFGIGLAVTLVP 118 (560)
Q Consensus 42 ~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il---~~~a~s~~~lii~R~l~G~g~G~~~~~~~ 118 (560)
..+.-+...++.+|-++++.-...+ |+-|-+.+.+.-++..+..++ .-+.++.+.+++.-+..|+..|..++.+.
T Consensus 280 r~~Y~~Y~~~YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNtF 357 (402)
T PF02487_consen 280 RDQYRWYQLLYQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNTF 357 (402)
T ss_pred HHHHHHHHHHHHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 4667778888889888887643222 342222222222222222222 23467899999999999999999999999
Q ss_pred HHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHH
Q 008603 119 IYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFG 154 (560)
Q Consensus 119 ~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~ 154 (560)
..+.|-.|+++|-.+++.....-++|..++.++...
T Consensus 358 ~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~ 393 (402)
T PF02487_consen 358 YRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLP 393 (402)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999999999999998666543
No 255
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.88 E-value=0.96 Score=48.44 Aligned_cols=202 Identities=19% Similarity=0.111 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhCChHHHHH-HHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-----WLGRRPMLIV-SSVL 82 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD-----r~GRR~~lli-~~ll 82 (560)
..+.+-+.++|.-.+... .+|.+.+.=|. +-++.+....++. -..-.+++.++.| |+|||+.-++ +-.+
T Consensus 34 llLl~LYllQGiP~GL~~-~iP~lL~ak~v--Syt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~l 108 (510)
T KOG3574|consen 34 LLLLFLYLLQGIPLGLIG-AIPLLLQAKGV--SYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYL 108 (510)
T ss_pred HHHHHHHHHcCCchhHhh-hhHHHhcCCCc--chhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeehHHH
Confidence 344556778888777766 88988886666 4455554432221 1223456778888 9999874332 2222
Q ss_pred HHHHHHHHHh-----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHH
Q 008603 83 YFIGGLVMLW-----------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCM 151 (560)
Q Consensus 83 ~ai~~il~~~-----------a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li 151 (560)
....+...+. .++...+....++.-|..++--.++-.+.-.+..++..|-+++.-....+.|.+++..+
T Consensus 109 lG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 109 LGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVV 188 (510)
T ss_pred HHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcce
Confidence 2222222222 23455555566777777777777788888899999999999988888888888887544
Q ss_pred HHHHHhccc-----cchh---------HHHHHHHHHHHHHHHhhheeccCChhhhhh--hcchHHHHHHHHHHhcCcChH
Q 008603 152 VFGMSLMTA-----PSWR---------LMLGVLFIPSLIYFVLTIFYLPESPRWLVS--KGRMLEAKKVLQSLRGREDVA 215 (560)
Q Consensus 152 ~~~l~~~~~-----~~Wr---------~~f~i~ai~~ll~~il~~~~lpEsP~~L~~--~gr~~ea~~~l~~l~~~~~~~ 215 (560)
...+...++ .+|. ..+++.+.+.++...++.++-+|.+....+ ..+..+.-+.+.+....+.++
T Consensus 189 fLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~ 268 (510)
T KOG3574|consen 189 FLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVR 268 (510)
T ss_pred eeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHH
Confidence 433221111 1221 234455555555555555555554432111 113344444555555544443
No 256
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.15 E-value=0.54 Score=50.81 Aligned_cols=136 Identities=15% Similarity=0.177 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 008603 46 GLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETA 125 (560)
Q Consensus 46 gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~ 125 (560)
+.+.-+-.+-+++..+++.++.+|+..+.=..++.++++++.++.+++++++.-+++-.+.+++.|......-.+. ..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt-~~y 140 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT-HFY 140 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH-Hhc
Confidence 4455666667788888888999998766556666778888899999999999999999999999998877666654 466
Q ss_pred CCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccC
Q 008603 126 PPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (560)
Q Consensus 126 p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpE 187 (560)
++.. .+-+..+...+.++|.....++.. -...-|..+.+...+.++..+..++.+|.
T Consensus 141 ~~~~----l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~ 197 (402)
T PF02487_consen 141 GKSS----LSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPS 197 (402)
T ss_pred Cccc----cccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 6432 222233333444455443333332 22345777777776666655444444543
No 257
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=93.65 E-value=0.044 Score=60.61 Aligned_cols=83 Identities=18% Similarity=0.261 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-hHHHHHHHHHHHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGR-RPMLIVSSVLYFIGGL 88 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GR-R~~lli~~ll~ai~~i 88 (560)
.+=+.++..+...+.+.|.++.+.+.+|+ ++.+.|.++++--+..+++.|+.|.++||+-+ |+.++.+.+....+++
T Consensus 15 ~~k~f~~~~~~~~g~l~pll~vy~kQLGl--~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~f 92 (618)
T KOG3762|consen 15 VAKLFYLFFGARFGSLFPLLAVYFKQLGL--NPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATF 92 (618)
T ss_pred eeeeeeeeeeecccccchHHHHHHHHcCC--CHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHH
Confidence 33444556666677888889999999999 89999999999999999999999999999964 4666666777777777
Q ss_pred HHHhhh
Q 008603 89 VMLWSP 94 (560)
Q Consensus 89 l~~~a~ 94 (560)
++.+++
T Consensus 93 ll~fv~ 98 (618)
T KOG3762|consen 93 LLVFVP 98 (618)
T ss_pred heeecc
Confidence 777653
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.64 E-value=0.6 Score=50.99 Aligned_cols=147 Identities=14% Similarity=0.153 Sum_probs=97.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHh----------hhhHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLW----------SPNVYVLLLARLLDGFGI 110 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~----------a~s~~~lii~R~l~G~g~ 110 (560)
++...+.+..+..++.+++..+.....-+..-|+++.++.++.++..+.... .++.+..+.--++..+..
T Consensus 253 s~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~ 332 (433)
T PF03092_consen 253 SPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIG 332 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHH
Confidence 7788888888888888888888877766777778887777776655543221 122222333445666666
Q ss_pred HHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc------cccchhHHHHHHHHHHHHHHHhhhee
Q 008603 111 GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM------TAPSWRLMLGVLFIPSLIYFVLTIFY 184 (560)
Q Consensus 111 G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~------~~~~Wr~~f~i~ai~~ll~~il~~~~ 184 (560)
+...-....+++|+.|+..-|+..++.....++|..++..+...+... ++.+-.+...++.+..++...+ .++
T Consensus 333 ~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~l-l~l 411 (433)
T PF03092_consen 333 MIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPL-LFL 411 (433)
T ss_pred HHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHH-HHH
Confidence 666666778899999999999999999999999988886666544311 1223334555666666554444 345
Q ss_pred ccCC
Q 008603 185 LPES 188 (560)
Q Consensus 185 lpEs 188 (560)
+|+.
T Consensus 412 Lp~~ 415 (433)
T PF03092_consen 412 LPPQ 415 (433)
T ss_pred cCCC
Confidence 5553
No 259
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=93.48 E-value=9.5 Score=41.82 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLY 83 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ 83 (560)
..+..+.++..+..-+.....|.+..+.... +---.+...-+-.+..++..+..|...||..|.+++..+.+..
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~-sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Q 78 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPG-SLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQ 78 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHH
Confidence 3556777777777777777777666666321 2233444445555667788889999999999999887776554
No 260
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=92.37 E-value=0.43 Score=52.00 Aligned_cols=99 Identities=20% Similarity=0.150 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-ChHHHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHHHHHHHH
Q 008603 42 PTIEGLIVAMSLIGATCITTCSGAIADWLG-RRPMLIVSSVLYFIGGLVMLWS----PNVYVLLLARLLDGFGIGLAVTL 116 (560)
Q Consensus 42 ~~~~gli~s~~~lG~iig~~~~G~LsDr~G-RR~~lli~~ll~ai~~il~~~a----~s~~~lii~R~l~G~g~G~~~~~ 116 (560)
....|.+.....++.++++.++|.+.||.. -|..+++......++..+.... ...+.++..-.+.|++.....|+
T Consensus 300 ~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pi 379 (480)
T KOG2563|consen 300 GVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPI 379 (480)
T ss_pred ccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCc
Confidence 368899999999999999999999999985 4555666555555553222211 12234444555667766666677
Q ss_pred HHHHHHhhcCCcchhhHhhHHHHH
Q 008603 117 VPIYISETAPPEIRGLLNTLPQFT 140 (560)
Q Consensus 117 ~~~~isE~~p~~~RG~~~~l~~~~ 140 (560)
..-+-.|..-|..-+...|+.+..
T Consensus 380 g~ElgvE~TyPv~E~tSsGll~~~ 403 (480)
T KOG2563|consen 380 GFELGVETTYPVAEGTSSGLLNLS 403 (480)
T ss_pred ceeeeeeeccccCCcccceeEEee
Confidence 777777765554445555554443
No 261
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=91.91 E-value=0.85 Score=52.39 Aligned_cols=74 Identities=8% Similarity=0.108 Sum_probs=51.3
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHHH
Q 008603 14 GNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWLG--RRPMLIVSSVLYFIGGLV 89 (560)
Q Consensus 14 ~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~l-G~iig~~~~G~LsDr~G--RR~~lli~~ll~ai~~il 89 (560)
+.++...........+| ++.+.+++ ++.+.+++.+...+ +.+++.++.|+++||++ .|+++.++.++..++.++
T Consensus 338 ~~~~~~~~~~~~~~~lP~yl~~~~g~--s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~ 415 (633)
T TIGR00805 338 AQVIDSLAFNGYITFLPKYLENQYGI--SSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLL 415 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC--cHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHH
Confidence 33333333344444555 56677999 88999999887766 67899999999999998 446666666666555443
No 262
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.03 E-value=0.5 Score=52.18 Aligned_cols=176 Identities=16% Similarity=0.155 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh-----hhCChHHHHH----
Q 008603 10 AAAIGNLLQGWDNATIAGAVLYIKRE--FHLETEPTIEGLIVAMSLIGATCITTCSGAIAD-----WLGRRPMLIV---- 78 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp~i~~~--~gls~s~~~~gli~s~~~lG~iig~~~~G~LsD-----r~GRR~~lli---- 78 (560)
.+.+-++++|.-.+.....+|.+.++ -+. +-++.+...-+..= .--.+++.++.| |+||||.-++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~--sy~q~~~fSla~~P--fSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKV--SYSQQAIFSLASYP--FSLKLLWAPIVDSVYSKRIGRRKSWIIPIQY 79 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCC--ChhHheeeeeeech--hHHHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence 34556778888666665778888777 455 44666544322110 012344555555 8999975433
Q ss_pred --HHHHHHHHHHH----------HHhh-------h--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHH
Q 008603 79 --SSVLYFIGGLV----------MLWS-------P--NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLP 137 (560)
Q Consensus 79 --~~ll~ai~~il----------~~~a-------~--s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~ 137 (560)
++++..++.-+ -.+. + +...+....++.=|-.+.---++-.|.-.+..++.++.+.+..
T Consensus 80 l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcq 159 (544)
T PF13000_consen 80 LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQ 159 (544)
T ss_pred HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHH
Confidence 33333333322 0110 0 1112333333333444444445556777888999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccc--------------chhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 138 QFTGCVGMFLAYCMVFGMSLMTAP--------------SWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 138 ~~~~~lG~~lg~li~~~l~~~~~~--------------~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
..+.+.|.++++.+...+-..++. .-...+.+.+...++..+++.++-+|.|
T Consensus 160 tvG~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~ 225 (544)
T PF13000_consen 160 TVGQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKP 225 (544)
T ss_pred HhHhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeeccc
Confidence 888888888886655444321110 1112234445555555566667777765
No 263
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.02 E-value=30 Score=38.63 Aligned_cols=145 Identities=10% Similarity=0.101 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC-ChHHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHHHHHHHHHHH
Q 008603 8 AIAAAIGNLLQGWDNATIAGAVLYIKREFHLET-EPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLYFI 85 (560)
Q Consensus 8 ~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~-s~~~~gli~s~~~l-G~iig~~~~G~LsDr~GRR~~lli~~ll~ai 85 (560)
.+.+++..|+..+.... +..++|.+=.+. .++....+=.-..+ .+++...+..+++++++|.+++-+....+..
T Consensus 26 ~~~l~~m~f~i~f~y~~----lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~ 101 (491)
T PF03219_consen 26 FLPLALMFFFILFNYTI----LRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLG 101 (491)
T ss_pred HHHHHHHHHHHHHHHHH----HHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 34445555555443322 444555542211 23333333332222 4566777889999999999877766655555
Q ss_pred HHHHHHhh--h-------h----------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCcchhhH
Q 008603 86 GGLVMLWS--P-------N----------------------VYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRGLL 133 (560)
Q Consensus 86 ~~il~~~a--~-------s----------------------~~~lii~R~l~G~g~G~~~~-~~~~~isE~~p~~~RG~~ 133 (560)
..++.++. | + .|.+.+..++.-+-.....+ .-+.+..|+++.++-.+.
T Consensus 102 fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRf 181 (491)
T PF03219_consen 102 FFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRF 181 (491)
T ss_pred HHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 44444431 1 1 12222233333332233222 347788999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q 008603 134 NTLPQFTGCVGMFLAYCMVFGMS 156 (560)
Q Consensus 134 ~~l~~~~~~lG~~lg~li~~~l~ 156 (560)
.+++....++|.+++........
T Consensus 182 Ypl~g~ganigli~sG~~~~~~~ 204 (491)
T PF03219_consen 182 YPLFGLGANIGLIFSGQLTSYFS 204 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988765554443
No 264
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=89.17 E-value=0.43 Score=50.40 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchh
Q 008603 52 SLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRG 131 (560)
Q Consensus 52 ~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG 131 (560)
..-.+.+.-.+.-.+.|.+--|+++++-.+...+..++..+.++.+.+=+.-++.|...+.- .+.++|+-+..+++++-
T Consensus 51 wTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~Yq 129 (433)
T KOG3810|consen 51 WTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-IAYYSYIYSKVDPEMYK 129 (433)
T ss_pred hhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-HhhhheeeeecCHHHHH
Confidence 33445556666668899998899998888888888888889999999888899999887766 67788999999999999
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhheeccCChhh
Q 008603 132 LLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPESPRW 191 (560)
Q Consensus 132 ~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP~~ 191 (560)
++.+......-.|-+.+.+..-.+...+..++...-.+......+.. +..+++|..+|-
T Consensus 130 rvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~-~~A~fLP~v~rS 188 (433)
T KOG3810|consen 130 RVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAV-LLALFLPRVKRS 188 (433)
T ss_pred HHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHH-HHHhhCCCCchh
Confidence 99999888888887777666655555555555554444443333333 334566665543
No 265
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.80 E-value=5.4 Score=43.77 Aligned_cols=109 Identities=17% Similarity=0.137 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCh-HHHHHHHH---HHHHHHHHHHh---------hhhHHHHHHHHHHHHHHH
Q 008603 44 IEGLIVAMSLIGATCITTCSGAIADWLGRR-PMLIVSSV---LYFIGGLVMLW---------SPNVYVLLLARLLDGFGI 110 (560)
Q Consensus 44 ~~gli~s~~~lG~iig~~~~G~LsDr~GRR-~~lli~~l---l~ai~~il~~~---------a~s~~~lii~R~l~G~g~ 110 (560)
..-++..++++|-.+|+.+..+. ..-.+| +.+.+..+ ++.+..+++.. -++-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 44567788889999999866433 122333 12322222 23333333322 235567777899999999
Q ss_pred HHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHH
Q 008603 111 GLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 111 G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~ 153 (560)
|-..+.+..+..+..++++|..+..+..++..+|..+|.++.+
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998899888865543
No 266
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=87.12 E-value=1.7 Score=47.65 Aligned_cols=111 Identities=16% Similarity=0.105 Sum_probs=63.4
Q ss_pred HHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------CChHHHHHHHHHHH----HHHHHHH-hhhhH
Q 008603 29 VLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWL-------GRRPMLIVSSVLYF----IGGLVML-WSPNV 96 (560)
Q Consensus 29 lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~-------GRR~~lli~~ll~a----i~~il~~-~a~s~ 96 (560)
+++..+-.|. +....-+...++..+..+|.+++|.++|++ +|.+.-.+.+.+.+ ...++.. +..+.
T Consensus 271 ~~~~~~~~~~--~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s 348 (493)
T KOG1330|consen 271 IYYSYELIGF--DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSS 348 (493)
T ss_pred HHHHHHHhCC--ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHH
Confidence 3444444454 334555677778888899999999999984 23332222222222 2222222 12333
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCcchhhHhhHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAV-TLVPIYISETAPPEIRGLLNTLPQFTG 141 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~-~~~~~~isE~~p~~~RG~~~~l~~~~~ 141 (560)
..+.+.-++.|...-... ++...+..|..|++.|..+.++-....
T Consensus 349 ~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~ 394 (493)
T KOG1330|consen 349 MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFE 394 (493)
T ss_pred HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHH
Confidence 444445555555444332 333446788999999999998866544
No 267
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=86.89 E-value=4 Score=42.97 Aligned_cols=138 Identities=13% Similarity=0.091 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHH
Q 008603 9 IAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 9 i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~i 88 (560)
.++++++++.+........+...+..++|.. -. +...+.-+.++++.+.+..++|-|.++.++...+.+...
T Consensus 32 ~i~s~~fl~~f~a~~gl~nlq~~vn~~lg~~----sl----~~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA 103 (390)
T KOG3097|consen 32 LILSIAFLLTFTAYLGLQNLQTSVNYDLGTV----SL----GALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA 103 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCcccc----hh----hhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3445555555444444444444444455431 11 223344456677777999999999999998877766544
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--cch-------------hhHhhHHHHHHHHHHHHHHHHHH
Q 008603 89 VMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPP--EIR-------------GLLNTLPQFTGCVGMFLAYCMVF 153 (560)
Q Consensus 89 l~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~--~~R-------------G~~~~l~~~~~~lG~~lg~li~~ 153 (560)
... -+.+..++-.-.+.|++.+..+..--+|++++... +.| |....+++...-+|..++..+..
T Consensus 104 ~Nl-~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~ 182 (390)
T KOG3097|consen 104 ANL-EPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMT 182 (390)
T ss_pred hhc-chhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 35778888889999999988776666666655432 333 33444555556666666655554
Q ss_pred HH
Q 008603 154 GM 155 (560)
Q Consensus 154 ~l 155 (560)
..
T Consensus 183 ~~ 184 (390)
T KOG3097|consen 183 LF 184 (390)
T ss_pred HH
Confidence 43
No 268
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=85.73 E-value=25 Score=38.24 Aligned_cols=97 Identities=18% Similarity=0.096 Sum_probs=71.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 41 EPTIEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVP 118 (560)
Q Consensus 41 s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR--~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~ 118 (560)
+...-|.+-++..+.+.++.+..|.+..++.+- ..+....++.+...++|++.+|.+...++.++.+.......+.+.
T Consensus 283 ~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~ 362 (412)
T PF01770_consen 283 ESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIAS 362 (412)
T ss_pred CcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345568888888888888999999996666654 344445556666777888899999999998888877777777777
Q ss_pred HHHHhhcCCcchhhHhhHH
Q 008603 119 IYISETAPPEIRGLLNTLP 137 (560)
Q Consensus 119 ~~isE~~p~~~RG~~~~l~ 137 (560)
.-++.....+.-|..+|+.
T Consensus 363 ~qIA~~l~~e~yaLVFGiN 381 (412)
T PF01770_consen 363 FQIAKNLSEERYALVFGIN 381 (412)
T ss_pred HHHHHhccccceeeeeeeH
Confidence 7777666666666555543
No 269
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=83.76 E-value=14 Score=38.09 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHh----hh---hHHHHHHHHHHHHHHHHHHHH
Q 008603 45 EGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLW----SP---NVYVLLLARLLDGFGIGLAVT 115 (560)
Q Consensus 45 ~gli~s~~~lG~iig~~~~G~LsDr~GRR--~~lli~~ll~ai~~il~~~----a~---s~~~lii~R~l~G~g~G~~~~ 115 (560)
.|.+.+.+.+..++|+-+...+..|-.+| +.+.+..+..+....+... +| +...-+++..+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 47888888888888888887777765555 4555555544443333222 12 222335566666778899999
Q ss_pred HHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhcc----ccchhHHHHHHHHHHHHHHHh
Q 008603 116 LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMT----APSWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 116 ~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~----~~~Wr~~f~i~ai~~ll~~il 180 (560)
...-+=+...|.+.|...+.++-.-.++-..+ .++..+ -.+-|.+|.++.+...+..++
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvCl------vLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCL------VLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhh------hheecccccCccccchhhhhhHHHHHHHHHH
Confidence 99999999999999998888765544332222 222211 235678898888877666544
No 270
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=83.33 E-value=16 Score=40.69 Aligned_cols=94 Identities=17% Similarity=0.110 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 44 IEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYI 121 (560)
Q Consensus 44 ~~gli~s~~~lG~iig~~~~G~LsDr~GRR--~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~i 121 (560)
.-|.+-++..+...+..+..|++-.++.|- ..+.+..++.+...++|.+.+|+|..+++.++.+.......+++..-+
T Consensus 299 yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~i 378 (511)
T TIGR00806 299 YNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQI 378 (511)
T ss_pred cCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777777788889999986666442 344444555566677888899999999999999988888888888888
Q ss_pred HhhcCCcchhhHhhHH
Q 008603 122 SETAPPEIRGLLNTLP 137 (560)
Q Consensus 122 sE~~p~~~RG~~~~l~ 137 (560)
+.....+.-|...|+.
T Consensus 379 A~~L~~~~~aLvFGiN 394 (511)
T TIGR00806 379 ASSLSKELCALVFGIN 394 (511)
T ss_pred HHHhcccceEEEEecH
Confidence 8777777667666653
No 271
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=83.15 E-value=83 Score=35.10 Aligned_cols=128 Identities=10% Similarity=0.085 Sum_probs=84.0
Q ss_pred HHHHHHHHcCCC-CChHHHHHHHHHHHH-HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhh---------hh-
Q 008603 28 AVLYIKREFHLE-TEPTIEGLIVAMSLI-GATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWS---------PN- 95 (560)
Q Consensus 28 ~lp~i~~~~gls-~s~~~~gli~s~~~l-G~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a---------~s- 95 (560)
++-.+++.+-.. ..+.....+=....+ ++++..++..++++++-|.+++-+.+..+....+++++. ++
T Consensus 45 ~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~ 124 (509)
T COG3202 45 LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDP 124 (509)
T ss_pred HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCH
Confidence 355678887653 234555555555555 678888999999999999988877666666555555441 11
Q ss_pred ----------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 96 ----------------------VYVLLLARLLDGFGIGLAVT-LVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 96 ----------------------~~~lii~R~l~G~g~G~~~~-~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
-|...+...+.=+-.....+ .-+....|++..++-.+..++++...+++..++..+.
T Consensus 125 ~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~ 204 (509)
T COG3202 125 EFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVT 204 (509)
T ss_pred HHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 13333333333333333322 3456778999999999999999999999998886655
Q ss_pred HHH
Q 008603 153 FGM 155 (560)
Q Consensus 153 ~~l 155 (560)
...
T Consensus 205 ~~~ 207 (509)
T COG3202 205 SWL 207 (509)
T ss_pred HHH
Confidence 443
No 272
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=82.48 E-value=21 Score=30.39 Aligned_cols=46 Identities=22% Similarity=0.274 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH
Q 008603 42 PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG 87 (560)
Q Consensus 42 ~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~ 87 (560)
....+.......++..++..+.+.+.|..|.+..+.+..++..++.
T Consensus 86 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 86 GVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAF 131 (141)
T ss_pred hHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHH
Confidence 4556677777788888888889988888887766655554444433
No 273
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=82.27 E-value=34 Score=37.15 Aligned_cols=160 Identities=11% Similarity=0.002 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCh---HHHHHHHHHHHHHHHHHHhh-----
Q 008603 22 NATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADWLGRR---PMLIVSSVLYFIGGLVMLWS----- 93 (560)
Q Consensus 22 ~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR---~~lli~~ll~ai~~il~~~a----- 93 (560)
......+.+++.+++-... . .......+.+.+.+...+.-.+--+..-| ++.....+...+..+.+.++
T Consensus 34 WN~fiTa~~y~~~~~~~~~--~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~~~ 110 (406)
T KOG1479|consen 34 WNMFITASDYYYYRFPGYH--N-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVKTD 110 (406)
T ss_pred hHhhhccHHHHHhhcCCCc--h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 3455556788888875422 2 33344444444444444433333333322 22111111111112222221
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHH-hccc-cchhHHH
Q 008603 94 ----PNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMS-LMTA-PSWRLML 167 (560)
Q Consensus 94 ----~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~-~~~~-~~Wr~~f 167 (560)
..+...++.-.+.+++.|..........++ +|++.-.-.+ .+.++++.+..+..+... ..+. ..=-.+|
T Consensus 111 ~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm----~G~a~aG~l~Sl~~i~tka~~~~~~~sA~~y 185 (406)
T KOG1479|consen 111 TWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVM----SGQALAGTLTSLLRILTKAAFSDSRTSALIY 185 (406)
T ss_pred CccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHH----hcchhHhHHHHHHHHHHHHhcCCCCceeehh
Confidence 235666666777888888776665555554 4555432211 122333333322222221 1121 1112244
Q ss_pred HHHHHHHHHHHHhhheeccCCh
Q 008603 168 GVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 168 ~i~ai~~ll~~il~~~~lpEsP 189 (560)
++.+.+.++.+++.+..+|..|
T Consensus 186 F~~s~~~~llC~i~y~~l~~lp 207 (406)
T KOG1479|consen 186 FITSTVILLLCFVLYLVLPKLP 207 (406)
T ss_pred HHHHHHHHHHHHHHHHHhhcch
Confidence 4444444444444455777776
No 274
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=80.86 E-value=60 Score=35.64 Aligned_cols=81 Identities=11% Similarity=0.003 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHH-HHHHHHHHHh----h---hhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 48 IVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVL-YFIGGLVMLW----S---PNVYVLLLARLLDGFGIGLAVTLVPI 119 (560)
Q Consensus 48 i~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll-~ai~~il~~~----a---~s~~~lii~R~l~G~g~G~~~~~~~~ 119 (560)
+.....+..++..+..-.+.-|+..|.=+..++++ .++..+.+.+ . ..++..++.-++.|++.+........
T Consensus 50 ~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~g 129 (437)
T TIGR00939 50 YTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLFG 129 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccchh
Confidence 33344444555555555555565543222223222 2222222221 1 24666677778888888888766666
Q ss_pred HHHhhcCCcc
Q 008603 120 YISETAPPEI 129 (560)
Q Consensus 120 ~isE~~p~~~ 129 (560)
+.+ .+|++.
T Consensus 130 la~-~fp~~~ 138 (437)
T TIGR00939 130 LAG-VFPSTY 138 (437)
T ss_pred hcc-cCCHHH
Confidence 655 666554
No 275
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=79.02 E-value=4.8 Score=44.63 Aligned_cols=71 Identities=11% Similarity=0.198 Sum_probs=52.2
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHH
Q 008603 97 YVLLLAR-LLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLML 167 (560)
Q Consensus 97 ~~lii~R-~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f 167 (560)
+.+++++ ++.|++.-.......++-+|...++.++...++++.....+.+++++.....+......|-+.+
T Consensus 388 ~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~ 459 (488)
T KOG2325|consen 388 ILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWII 459 (488)
T ss_pred hhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHH
Confidence 3444443 4567776666677788899999999999999999999999999997777666554444443333
No 276
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=74.23 E-value=1.2 Score=46.16 Aligned_cols=106 Identities=20% Similarity=0.173 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hCChHHHHHH--HHHHHHHHHHHH----------hhhhHHHHHHHHHHHHHHHHHH
Q 008603 47 LIVAMSLIGATCITTCSGAIADW-LGRRPMLIVS--SVLYFIGGLVML----------WSPNVYVLLLARLLDGFGIGLA 113 (560)
Q Consensus 47 li~s~~~lG~iig~~~~G~LsDr-~GRR~~lli~--~ll~ai~~il~~----------~a~s~~~lii~R~l~G~g~G~~ 113 (560)
....+++++-.+|+.+.++.--+ ..+|.....+ =+++.+..+++. +.+|-+.+++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34567889999999987764311 1344333321 122222222221 1234467778889999999999
Q ss_pred HHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 114 VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 114 ~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
.+.+..+..+..++++|..+..+..+...+|..+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988888888888888875544
No 277
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=71.89 E-value=1.5e+02 Score=31.99 Aligned_cols=82 Identities=22% Similarity=0.208 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHH----HHH-Hh----hhhHHHHHHHHHHHHHHHHH
Q 008603 42 PTIEGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGG----LVM-LW----SPNVYVLLLARLLDGFGIGL 112 (560)
Q Consensus 42 ~~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~----il~-~~----a~s~~~lii~R~l~G~g~G~ 112 (560)
-.+.+++.+.+.....+|+...-++.|.--.-+.+..=.++..++. ++. .| .++-+.+.+.-+++|.-.|.
T Consensus 42 Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~LVG~ 121 (508)
T COG4262 42 ILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVLVGA 121 (508)
T ss_pred eeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHHHhc
Confidence 3677788888887777777777666664322222222222222111 111 22 34567888889999999999
Q ss_pred HHHHHHHHHHh
Q 008603 113 AVTLVPIYISE 123 (560)
Q Consensus 113 ~~~~~~~~isE 123 (560)
-.|..+.++.-
T Consensus 122 EiPL~mrml~~ 132 (508)
T COG4262 122 EIPLLMRMLQR 132 (508)
T ss_pred chHHHHHHHHH
Confidence 98888777654
No 278
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=61.81 E-value=86 Score=33.74 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCh--HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008603 44 IEGLIVAMSLIGATCITTCSGAIADWLGRR--PMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYI 121 (560)
Q Consensus 44 ~~gli~s~~~lG~iig~~~~G~LsDr~GRR--~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~i 121 (560)
.-|.+=++..+..+++.+..|.+.-.+.|. .++..+.+..+-..++|..+.++|...++.++.........++...-+
T Consensus 272 yNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~i 351 (433)
T KOG3810|consen 272 YNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQI 351 (433)
T ss_pred hcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHH
Confidence 335555667777788999999997666655 455556666666677788888888888888887777777778888888
Q ss_pred HhhcCCcchhhHhhHHHHH
Q 008603 122 SETAPPEIRGLLNTLPQFT 140 (560)
Q Consensus 122 sE~~p~~~RG~~~~l~~~~ 140 (560)
++....+.-|..+|+..+.
T Consensus 352 A~nL~~e~~gLvFGiNTFv 370 (433)
T KOG3810|consen 352 ARNLSSELFGLVFGINTFV 370 (433)
T ss_pred HHhhhhhhheeeeehHHHH
Confidence 8888888888777765443
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=54.87 E-value=3.4e+02 Score=30.19 Aligned_cols=71 Identities=10% Similarity=-0.018 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC-cchhhHhhHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHH
Q 008603 104 LLDGFGIGLAVTLVPIYISETAPP-EIRGLLNTLPQFTGCVGMFLAYCMVFGMSLMTAPSWRLMLGVLFIPSLI 176 (560)
Q Consensus 104 ~l~G~g~G~~~~~~~~~isE~~p~-~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~~~~~Wr~~f~i~ai~~ll 176 (560)
++.|+........--..+.|.+|. +.|...++.++.+.++..++..+.. .......||+....+.-++.++
T Consensus 274 i~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~--~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 274 IAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLS--GNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhhHHHHHHHHHHHHHH
Confidence 345556666666666677888875 4577777777666555554443333 4455667998776665555544
No 280
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=53.81 E-value=42 Score=35.44 Aligned_cols=105 Identities=16% Similarity=0.270 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCChH---H---HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 008603 43 TIEGLIVAMSLIGATCITTCSGAIADWLGRRP---M---LIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTL 116 (560)
Q Consensus 43 ~~~gli~s~~~lG~iig~~~~G~LsDr~GRR~---~---lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~ 116 (560)
.+.-|....+.+|-++++--. ++=|-+ . +.+-.+++.+.-....+.++++...+.-+.-|+-.|..++-
T Consensus 288 sqYRwyqvlYQlGVFiSRSS~-----~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 288 SQYRWYQVLYQLGVFISRSSI-----NLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred hcchhhheeeeeeEEEEeccc-----eEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHH
Confidence 346677777888766654322 111111 1 12223333344445556889998888899999999988888
Q ss_pred HHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 117 VPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 117 ~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
..--+.+-.+++.|-.+++.....-++|..++.++.
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 888888889999999999999998899988875544
No 281
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=52.95 E-value=17 Score=38.20 Aligned_cols=84 Identities=13% Similarity=0.156 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008603 45 EGLIVAMSLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVTLVPIYISET 124 (560)
Q Consensus 45 ~gli~s~~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~ 124 (560)
.|.+.-+-.+-+.+..+.+..+.||+---+-..+..++.+.+.++.+++++.++-+++-.+..++.|..... ..-++..
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiT-FL~lss~ 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEIT-FLALSSR 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceee-hhhhhcc
Confidence 456666666777888888888898864333334455677778888889999999988888888888876433 3334445
Q ss_pred cCCcc
Q 008603 125 APPEI 129 (560)
Q Consensus 125 ~p~~~ 129 (560)
+|+..
T Consensus 143 Y~~~~ 147 (409)
T KOG3880|consen 143 YPSIV 147 (409)
T ss_pred CCCce
Confidence 55443
No 282
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=51.20 E-value=64 Score=35.09 Aligned_cols=109 Identities=15% Similarity=0.059 Sum_probs=73.0
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhhhCChHHHHHHHH--HHHHHHHHH------HhhhhHHHHHHHHHHHHHHHHHH
Q 008603 43 TIEGLIVAM-SLIGATCITTCSGAIADWLGRRPMLIVSSV--LYFIGGLVM------LWSPNVYVLLLARLLDGFGIGLA 113 (560)
Q Consensus 43 ~~~gli~s~-~~lG~iig~~~~G~LsDr~GRR~~lli~~l--l~ai~~il~------~~a~s~~~lii~R~l~G~g~G~~ 113 (560)
...-++..+ +++...+|.+...++-+. +||...+.+++ ++.....++ .+-.+-+.+++.-.+.|+..|-.
T Consensus 282 ~y~~~~~~l~fN~~d~vG~~~a~~~~~~-~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnGYl 360 (406)
T KOG1479|consen 282 WYALLLVFLSFNVFDLIGSILAALLTWP-DPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNGYL 360 (406)
T ss_pred hhHHHHHHHHhHHHHHhhhhhhhcccCC-CCceehHHHHHHHHHHHHHHHhccCCCCceecCchHHHHHHHHHHhccchH
Confidence 344455555 788888887666555443 34443333322 222222211 22345577888889999999999
Q ss_pred HHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHH
Q 008603 114 VTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMV 152 (560)
Q Consensus 114 ~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~ 152 (560)
.+....+.....|++++-.+..+.......|...|.+..
T Consensus 361 tsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 361 TSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred hhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 888899999999999998888888888888888775443
No 283
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=49.66 E-value=59 Score=36.01 Aligned_cols=64 Identities=16% Similarity=0.032 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 008603 52 SLIGATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDGFGIGLAVT 115 (560)
Q Consensus 52 ~~lG~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G~g~G~~~~ 115 (560)
..+...+.+...-++++|+|-|+.+..+...+.++..+....++.+....-|-..|+-.+....
T Consensus 341 ns~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~ 404 (498)
T KOG0637|consen 341 NSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLT 404 (498)
T ss_pred HHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhc
Confidence 3344457788888999999966666666666777777777788888888888888754444433
No 284
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=49.03 E-value=64 Score=37.74 Aligned_cols=76 Identities=11% Similarity=0.141 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHHhhh--CChHHHHHHHHHHHHHH
Q 008603 12 AIGNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWL--GRRPMLIVSSVLYFIGG 87 (560)
Q Consensus 12 ~l~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~l-G~iig~~~~G~LsDr~--GRR~~lli~~ll~ai~~ 87 (560)
.++..+.......+...+| |+.+.|++ +++.+..+.++..+ ++.+|.+++|.+..|+ ..|.+..+.++...++.
T Consensus 398 ~l~~~~~~~~~~G~~tFlPKyLE~Qfg~--sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l 475 (735)
T KOG3626|consen 398 VLASVIESLAITGYITFLPKYLETQFGI--SASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSL 475 (735)
T ss_pred HHHHHHHHHHHhhHHHhhHHHHHHHcCC--CHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHH
Confidence 3334444444444444566 78888999 77888887755554 5677888999999976 45566666555555444
Q ss_pred HH
Q 008603 88 LV 89 (560)
Q Consensus 88 il 89 (560)
++
T Consensus 476 ~~ 477 (735)
T KOG3626|consen 476 LF 477 (735)
T ss_pred HH
Confidence 43
No 285
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=47.82 E-value=77 Score=27.94 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhh-CChHHHH
Q 008603 45 EGLIVAMSLIGATCITTCSGAIADWL-GRRPMLI 77 (560)
Q Consensus 45 ~gli~s~~~lG~iig~~~~G~LsDr~-GRR~~ll 77 (560)
...-.++-+++.++.....|++.|+| |-+|.-+
T Consensus 44 ~a~klssefIsGilVGa~iG~llD~~agTsPwgl 77 (116)
T COG5336 44 QAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGL 77 (116)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 34445666677777778888999987 4444433
No 286
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=44.69 E-value=3.5e+02 Score=27.37 Aligned_cols=32 Identities=19% Similarity=0.188 Sum_probs=14.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 008603 93 SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAP 126 (560)
Q Consensus 93 a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p 126 (560)
+.|...++.+-...|+.... ......++-..|
T Consensus 31 S~s~~FyY~sg~~lGv~~s~--li~~~~~~k~lP 62 (249)
T PF10225_consen 31 SRSVLFYYSSGISLGVLASL--LILLFQLSKLLP 62 (249)
T ss_pred ccChhHHHhhhHHHHHHHHH--HHHHHHHHHHcc
Confidence 44544444443334432221 222345677888
No 287
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=43.66 E-value=4e+02 Score=27.78 Aligned_cols=80 Identities=15% Similarity=0.178 Sum_probs=45.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhh---hCChHHHHH
Q 008603 2 GGAALVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITTCSGAIADW---LGRRPMLIV 78 (560)
Q Consensus 2 ~~~~li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~~~G~LsDr---~GRR~~lli 78 (560)
+|.++..+++.+++++.-+..+..+..+..+.+.++. -....++.. +.+...++..-.++ ||.||.=++
T Consensus 21 ~r~l~~~~~L~~~f~~iE~i~g~~s~SlaLLADa~Hm--l~D~~al~l------al~A~~~a~r~~~~~~TfGy~R~eiL 92 (296)
T COG1230 21 ERRLLIALLLNLAFMLIEIIGGLLTGSLALLADALHM--LSDALALLL------ALIAIKLARRPATKRFTFGYKRLEIL 92 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHHHH--HHHHHHHHH------HHHHHHHhcCCCCCCCCccHhHHHHH
Confidence 4677777888888887777777777777778888876 222222221 22222233333332 677776666
Q ss_pred HHHHHHHHHHH
Q 008603 79 SSVLYFIGGLV 89 (560)
Q Consensus 79 ~~ll~ai~~il 89 (560)
+.++.++..++
T Consensus 93 aa~~nav~Li~ 103 (296)
T COG1230 93 AAFLNALLLIV 103 (296)
T ss_pred HHHHHHHHHHH
Confidence 65555544433
No 288
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=39.55 E-value=9.8 Score=42.93 Aligned_cols=73 Identities=16% Similarity=0.226 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHcCCCCChHHHHHHHHHHHH-HHHHHHHHHHHHHhhhC--ChHHHHHHHHHHHHHHH
Q 008603 14 GNLLQGWDNATIAGAVL-YIKREFHLETEPTIEGLIVAMSLI-GATCITTCSGAIADWLG--RRPMLIVSSVLYFIGGL 88 (560)
Q Consensus 14 ~~fl~g~~~~~~~~~lp-~i~~~~gls~s~~~~gli~s~~~l-G~iig~~~~G~LsDr~G--RR~~lli~~ll~ai~~i 88 (560)
+.....+....+....| |+..+|++ +++..+++.++..+ +.++|.+++|.+..|+. .|.++.++.+...++.+
T Consensus 313 a~~~~~~~~~G~~tF~pKylE~QF~~--sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~ 389 (539)
T PF03137_consen 313 AGVFESFIVSGFATFLPKYLESQFGL--SASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVI 389 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHH
Confidence 33333333344444555 78888999 77888888766665 77889999999999874 45555555555444433
No 289
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=39.53 E-value=32 Score=35.13 Aligned_cols=60 Identities=12% Similarity=0.300 Sum_probs=41.6
Q ss_pred cchhhHhhHHHHHHHHHHHHHHHHHHHH---HhccccchhHHHHHHHHHHHHHHHhhheeccC
Q 008603 128 EIRGLLNTLPQFTGCVGMFLAYCMVFGM---SLMTAPSWRLMLGVLFIPSLIYFVLTIFYLPE 187 (560)
Q Consensus 128 ~~RG~~~~l~~~~~~lG~~lg~li~~~l---~~~~~~~Wr~~f~i~ai~~ll~~il~~~~lpE 187 (560)
++|+..+.+.....++|.++..++.... ...-..+|++.+.+.+++.++-+++..++..|
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~ 64 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKN 64 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 5677788888888899998885553322 11123479999999988888777665555544
No 290
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=37.43 E-value=3.3e+02 Score=27.76 Aligned_cols=36 Identities=19% Similarity=0.312 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHHHHH
Q 008603 78 VSSVLYFIGGLVML-WSPNVYVLLLARLLDGFGIGLA 113 (560)
Q Consensus 78 i~~ll~ai~~il~~-~a~s~~~lii~R~l~G~g~G~~ 113 (560)
++.+.++++.++.. ..++.+.+.+.-++.+|+.++.
T Consensus 4 ~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml 40 (284)
T PF12805_consen 4 ATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGML 40 (284)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 33444433333333 3455566666666666666555
No 291
>COG4769 Predicted membrane protein [Function unknown]
Probab=35.64 E-value=1.6e+02 Score=28.03 Aligned_cols=46 Identities=17% Similarity=0.132 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHhhhCChHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q 008603 55 GATCITTCSGAIADWLGRRPMLIVSSVLYFIGGLVMLWSPNVYVLLLARLLDG 107 (560)
Q Consensus 55 G~iig~~~~G~LsDr~GRR~~lli~~ll~ai~~il~~~a~s~~~lii~R~l~G 107 (560)
|++.+..++ ++..++|+|+.-.++.- .+-++.+|+..+++++++.+
T Consensus 86 G~i~S~L~m-~~l~~f~~k~~S~lgiS------~mGaF~hNl~QLivas~Lv~ 131 (181)
T COG4769 86 GAILSTLFM-YFLYQFGPKYLSLLGIS------VMGAFTHNLGQLIVASFLVF 131 (181)
T ss_pred HHHHHHHHH-HHHHHcCCceEeeeehh------hHHHHHHhHHHHHHHHHHHh
Confidence 333333333 45567887776433321 12346788888888888875
No 292
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=35.52 E-value=2.2e+02 Score=26.35 Aligned_cols=25 Identities=24% Similarity=0.250 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCChH
Q 008603 50 AMSLIGATCITTCSGAIADWLGRRP 74 (560)
Q Consensus 50 s~~~lG~iig~~~~G~LsDr~GRR~ 74 (560)
.-+.+|..+...+.|++.+|..+++
T Consensus 60 gGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 60 GGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred ChHHHHHHHHHHHHHHHHHhccccc
Confidence 5567888999999999999988764
No 293
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=35.32 E-value=4.1e+02 Score=25.42 Aligned_cols=54 Identities=9% Similarity=0.076 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHHHHHHHHH
Q 008603 6 LVAIAAAIGNLLQGWDNATIAGAVLYIKREFHLETEPTIEGLIVAMSLIGATCITT 61 (560)
Q Consensus 6 li~i~~~l~~fl~g~~~~~~~~~lp~i~~~~gls~s~~~~gli~s~~~lG~iig~~ 61 (560)
++..++++.+-..+...+.+.+.+.....-+++ ++..-+++..+.+.+++++.+
T Consensus 11 vi~svlsi~fgvvfl~w~~~~~v~at~lhp~al--e~~~~~i~~GiW~maavi~~l 64 (192)
T COG4721 11 VILSVLSIVFGVVFLGWGYVGNVLATLLHPLAL--EPFANEILFGIWFMAAVIAAL 64 (192)
T ss_pred HHHHHHHHHHHhheeehhhhhHHHHHhcchhhc--CccccchHHHHHHHHHHHeee
Confidence 333334433333334444445554444444446 445555666766666555443
No 294
>PF04833 COBRA: COBRA-like protein; InterPro: IPR006918 In Arabidopsis thaliana (Mouse-ear cress) members of the family are all extracellular glycosyl-phosphatidyl inositol-anchored proteins (GPI-linked) []. The type example of the family is COBRA (Q94KT8 from SWISSPROT) and the family is generally annotated as COBRA-like (COBL). COBRA is involved in determining the orientation of cell expansion, probably by playing an important role in cellulose deposition. It may act by recruiting cellulose synthesizing complexes to discrete positions on the cell surface. Some members of this family are annotated as phytochelatin synthase, but these annotations are incorrect [].
Probab=34.81 E-value=20 Score=33.99 Aligned_cols=12 Identities=58% Similarity=1.763 Sum_probs=10.8
Q ss_pred ceeEEEeecccc
Q 008603 406 GWQLAWKWSEKE 417 (560)
Q Consensus 406 gw~~~~~~~~~~ 417 (560)
||+|-|.|.++|
T Consensus 20 gW~L~W~W~~~E 31 (169)
T PF04833_consen 20 GWNLGWTWAKKE 31 (169)
T ss_pred CceEeeEEcCCE
Confidence 899999999864
No 295
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=34.21 E-value=4.5e+02 Score=26.97 Aligned_cols=66 Identities=15% Similarity=0.254 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-hCChHHHH----HHHHHHHHHHHHHHh-hh----hHHHHHHHHHHHHHHHH
Q 008603 46 GLIVAMSLIGATCITTCSGAIADW-LGRRPMLI----VSSVLYFIGGLVMLW-SP----NVYVLLLARLLDGFGIG 111 (560)
Q Consensus 46 gli~s~~~lG~iig~~~~G~LsDr-~GRR~~ll----i~~ll~ai~~il~~~-a~----s~~~lii~R~l~G~g~G 111 (560)
......+..|.++|.+..|+.... +-||+.+. .+.++.+++.++... .+ ++..+++.-|+.|++.=
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~W 219 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLW 219 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHH
Confidence 445556666666777777777653 45666544 233444444444212 11 35566677777776543
No 296
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=33.40 E-value=1.6e+02 Score=27.61 Aligned_cols=80 Identities=23% Similarity=0.260 Sum_probs=46.3
Q ss_pred HHHhhhCChHHHHHHHHHHHHHHHHHH----h-------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhH
Q 008603 65 AIADWLGRRPMLIVSSVLYFIGGLVML----W-------SPNVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLL 133 (560)
Q Consensus 65 ~LsDr~GRR~~lli~~ll~ai~~il~~----~-------a~s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~ 133 (560)
.++||.-||-.+..+.-. +++...+. + .+++..++..-++.|+|.- .+.+-.++....+++-|..
T Consensus 56 ~Vs~RM~rRm~~~~GiP~-~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPT-ALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCc
Confidence 467788666555544322 22222111 1 2445555555555544432 4456667777788888999
Q ss_pred hhHHHHHHHHHHHHH
Q 008603 134 NTLPQFTGCVGMFLA 148 (560)
Q Consensus 134 ~~l~~~~~~lG~~lg 148 (560)
.|+-.+--+++-+.-
T Consensus 132 lG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 132 LGWEEFKRNWGRMWE 146 (153)
T ss_pred ccHHHHHHhHHHHHH
Confidence 998888777776543
No 297
>TIGR00917 2A060601 Niemann-Pick C type protein family. The model describes Niemann-Pick C type protein in eukaryotes. The defective protein has been associated with Niemann-Pick disease which is described in humans as autosomal recessive lipidosis. It is characterized by the lysosomal accumulation of unestrified cholesterol. It is an integral membrane protein, which indicates that this protein is most likely involved in cholesterol transport or acts as some component of cholesterol homeostasis.
Probab=31.36 E-value=1.1e+03 Score=29.47 Aligned_cols=18 Identities=28% Similarity=0.355 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008603 103 RLLDGFGIGLAVTLVPIY 120 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~ 120 (560)
.++.|+|.--.......+
T Consensus 643 FLvL~IGVD~ifilv~~~ 660 (1204)
T TIGR00917 643 FLVLAVGVDNIFILVQTY 660 (1204)
T ss_pred HHHHHHHhhHHHHHHHHH
Confidence 445566665544444444
No 298
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=31.29 E-value=7.5e+02 Score=29.03 Aligned_cols=55 Identities=22% Similarity=0.312 Sum_probs=36.1
Q ss_pred HHHHHHhh----hCChHHHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHH
Q 008603 62 CSGAIADW----LGRRPMLIVSSVLYFIGGLVMLWS-PNVYVLLLARLLDGFGIGLAVTL 116 (560)
Q Consensus 62 ~~G~LsDr----~GRR~~lli~~ll~ai~~il~~~a-~s~~~lii~R~l~G~g~G~~~~~ 116 (560)
+.+-+.|. -||.+-++++.++++++.+...+. +..+.+.++-++.+|+.++..+.
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga~ 101 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGAL 101 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh
Confidence 34456663 366788888888888887776654 45566666666677766665443
No 299
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=29.95 E-value=7.2e+02 Score=26.64 Aligned_cols=138 Identities=18% Similarity=0.192 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHH---HHcCCCCChHHHHHHHHHHH-H----HHHHHHHHHHHHHhhhC--ChHHHHH
Q 008603 10 AAAIGNLLQGWDNATIAGAVL-YIK---REFHLETEPTIEGLIVAMSL-I----GATCITTCSGAIADWLG--RRPMLIV 78 (560)
Q Consensus 10 ~~~l~~fl~g~~~~~~~~~lp-~i~---~~~gls~s~~~~gli~s~~~-l----G~iig~~~~G~LsDr~G--RR~~lli 78 (560)
++.++-++.|.++.......- .+. ++.+. +....+-+..... + .++++.+++-.++|..| ++.....
T Consensus 123 ~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~--~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~ 200 (354)
T PF05631_consen 123 VLLLGRVLGGIATSLLFSAFESWMVHEHNKRGF--PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDA 200 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC--ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHH
Confidence 445566666666655544322 122 22344 3344333333222 3 34555556666666664 5666666
Q ss_pred HHHHHHHHHHHHH--hhhhH---------------HHHHHH---H-HHHHHHHHHHHHHHHHHHHhhcCCcc---hhhHh
Q 008603 79 SSVLYFIGGLVML--WSPNV---------------YVLLLA---R-LLDGFGIGLAVTLVPIYISETAPPEI---RGLLN 134 (560)
Q Consensus 79 ~~ll~ai~~il~~--~a~s~---------------~~lii~---R-~l~G~g~G~~~~~~~~~isE~~p~~~---RG~~~ 134 (560)
+..+.+++.++.. |..|+ ..-.+. | ++.|+....+..+.+.++-.|.|.-. +..=.
T Consensus 201 a~~~l~~~~~~I~~~W~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~~~~~P~ 280 (354)
T PF05631_consen 201 AIVLLAVAAVLILKTWPENYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPDDEELPL 280 (354)
T ss_pred HHHHHHHHHHHHHhcccccCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCCCCCCCc
Confidence 6666666655443 33332 011111 2 46788888888888888888888633 33333
Q ss_pred hHHHHHHHHHHHHHH
Q 008603 135 TLPQFTGCVGMFLAY 149 (560)
Q Consensus 135 ~l~~~~~~lG~~lg~ 149 (560)
|+....+...+++|.
T Consensus 281 GlIFssFM~a~MlGS 295 (354)
T PF05631_consen 281 GLIFSSFMVAMMLGS 295 (354)
T ss_pred hHHHHHHHHHHHHHH
Confidence 444444444444443
No 300
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=28.89 E-value=7.1e+02 Score=28.19 Aligned_cols=51 Identities=16% Similarity=0.250 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFL 147 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~l 147 (560)
..+++..++..+..-..++...++-+-++.|.+=|+.|++.+...|+|.--
T Consensus 406 ~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtW 456 (544)
T PF13000_consen 406 LLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTW 456 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCc
Confidence 344445667777777777888899999999999999999999888887643
No 301
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=27.23 E-value=7.9e+02 Score=28.88 Aligned_cols=54 Identities=15% Similarity=0.238 Sum_probs=34.5
Q ss_pred HHHHHHhh----hCChHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH
Q 008603 62 CSGAIADW----LGRRPMLIVSSVLYFIGGLVMLW-SPNVYVLLLARLLDGFGIGLAVT 115 (560)
Q Consensus 62 ~~G~LsDr----~GRR~~lli~~ll~ai~~il~~~-a~s~~~lii~R~l~G~g~G~~~~ 115 (560)
+.+.++|. -||.+-++++.++++++.+...+ .+..+.+.++-++..|+.++..+
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga 100 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGA 100 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 34566663 46777777888888777766654 45556666666666666655533
No 302
>cd02435 CCC1 CCC1. CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants.
Probab=26.32 E-value=6.2e+02 Score=25.44 Aligned_cols=10 Identities=20% Similarity=0.647 Sum_probs=4.1
Q ss_pred HHHHHHhhhC
Q 008603 62 CSGAIADWLG 71 (560)
Q Consensus 62 ~~G~LsDr~G 71 (560)
+.|.+..+++
T Consensus 198 ilG~~~s~~s 207 (241)
T cd02435 198 VFGYVKTWFT 207 (241)
T ss_pred HHHHHHHhhc
Confidence 3444444443
No 303
>PRK10263 DNA translocase FtsK; Provisional
Probab=25.39 E-value=6.4e+02 Score=31.80 Aligned_cols=20 Identities=10% Similarity=-0.019 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHhhhC
Q 008603 52 SLIGATCITTCSGAIADWLG 71 (560)
Q Consensus 52 ~~lG~iig~~~~G~LsDr~G 71 (560)
.+++..+|..+...+.-.||
T Consensus 61 ~Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 61 HNLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 34555566666666655666
No 304
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=25.04 E-value=3.5e+02 Score=26.14 Aligned_cols=23 Identities=22% Similarity=0.209 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhCC
Q 008603 50 AMSLIGATCITTCSGAIADWLGR 72 (560)
Q Consensus 50 s~~~lG~iig~~~~G~LsDr~GR 72 (560)
.-+.++.+++..+.|++.||.-+
T Consensus 89 gGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 89 GGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhc
Confidence 45667888999999999999875
No 305
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=25.04 E-value=1e+02 Score=26.85 Aligned_cols=31 Identities=23% Similarity=0.351 Sum_probs=24.9
Q ss_pred cccchhHHHHHHHHHHHHHHHhhheeccCCh
Q 008603 159 TAPSWRLMLGVLFIPSLIYFVLTIFYLPESP 189 (560)
Q Consensus 159 ~~~~Wr~~f~i~ai~~ll~~il~~~~lpEsP 189 (560)
+..+|+.+|++...++++.+.+.+.+.||+.
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 4458999999888888887777788889874
No 306
>TIGR00918 2A060602 The Eukaryotic (Putative) Sterol Transporter (EST) Family.
Probab=23.57 E-value=7.5e+02 Score=30.89 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008603 103 RLLDGFGIGLAVTLVPIY 120 (560)
Q Consensus 103 R~l~G~g~G~~~~~~~~~ 120 (560)
.++.|+|.--.+..+..|
T Consensus 465 FLvLgIGVDn~Fllv~~~ 482 (1145)
T TIGR00918 465 FLALGVGVDDVFLLAHAF 482 (1145)
T ss_pred HHHhhhhhcchhHHHHHH
Confidence 334677766555554444
No 307
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=22.73 E-value=7e+02 Score=24.11 Aligned_cols=19 Identities=32% Similarity=0.179 Sum_probs=8.5
Q ss_pred chhHHHHHHHHHHHHHHHh
Q 008603 162 SWRLMLGVLFIPSLIYFVL 180 (560)
Q Consensus 162 ~Wr~~f~i~ai~~ll~~il 180 (560)
+.+..-++..+++++.+.+
T Consensus 175 np~l~~~~~iiig~i~~~~ 193 (206)
T PF06570_consen 175 NPVLPPWVYIIIGVIAFAL 193 (206)
T ss_pred CcCCCHHHHHHHHHHHHHH
Confidence 3344444444555444433
No 308
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=22.48 E-value=4.6e+02 Score=29.94 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=53.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHHHHHHHHHHhc
Q 008603 95 NVYVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLAYCMVFGMSLM 158 (560)
Q Consensus 95 s~~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg~li~~~l~~~ 158 (560)
|+.+++--.++.|++-........-+.-+-+|++.|..+++++.....+|..++.++.......
T Consensus 457 Si~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~ 520 (571)
T KOG1237|consen 457 SILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLTVAVGNYLSSVLVSLVQFS 520 (571)
T ss_pred eHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567777788999999988888888888999999999999999999999999987666544433
No 309
>COG3619 Predicted membrane protein [Function unknown]
Probab=21.95 E-value=8.1e+02 Score=24.50 Aligned_cols=30 Identities=7% Similarity=0.108 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 008603 43 TIEGLIVAMSLIGATCITTCSGAIADWLGR 72 (560)
Q Consensus 43 ~~~gli~s~~~lG~iig~~~~G~LsDr~GR 72 (560)
...........+..+++......+..+..|
T Consensus 55 ~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~ 84 (226)
T COG3619 55 AALAVLLLLPILAFVLGVAAAELISRRATR 84 (226)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444455555556666665555445544443
No 310
>PRK03612 spermidine synthase; Provisional
Probab=21.93 E-value=9.2e+02 Score=27.07 Aligned_cols=18 Identities=22% Similarity=0.381 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 008603 74 PMLIVSSVLYFIGGLVML 91 (560)
Q Consensus 74 ~~lli~~ll~ai~~il~~ 91 (560)
+++.+..+..++++++..
T Consensus 149 ~ly~~ntlGa~~G~l~~~ 166 (521)
T PRK03612 149 TVLAADYLGALVGGLAFP 166 (521)
T ss_pred hhHhHHhHHHHHHHHHHH
Confidence 344444555555554443
No 311
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=21.59 E-value=4.9e+02 Score=30.22 Aligned_cols=52 Identities=17% Similarity=0.178 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhhHhhHHHHHHHHHHHHH
Q 008603 97 YVLLLARLLDGFGIGLAVTLVPIYISETAPPEIRGLLNTLPQFTGCVGMFLA 148 (560)
Q Consensus 97 ~~lii~R~l~G~g~G~~~~~~~~~isE~~p~~~RG~~~~l~~~~~~lG~~lg 148 (560)
+..+.-.++.+.+--.......-+-.+-+|++.|..+.++......+|.++.
T Consensus 566 ~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~ 617 (654)
T TIGR00926 566 LWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIV 617 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555555566677777777777666666666665
Done!