BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008604
         (560 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9ZPI5|MFP2_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2
           OS=Arabidopsis thaliana GN=MFP2 PE=1 SV=1
          Length = 725

 Score =  960 bits (2482), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/560 (80%), Positives = 506/560 (90%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           M+LTSKPVK EE HSLGL+DAVV P +LV+TAR+WALDI+  R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLG 225

Query: 61  EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
           EAREI  FA+AQ  K+APN+ HP++C+D +E G+VSGPRAGL+KEAE   ++++ +T K 
Sbjct: 226 EAREILTFAKAQTLKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKG 285

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+H+FF+QRGT+KVPGVTD GL PR++KKVAI+GGGLMGSGIATALILSNYPVILKEVNE
Sbjct: 286 LIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
           KFLEAGIGRV+ANLQSRV+KG M+QEKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 346 KFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRIVGAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRT 465

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
           N TS QVIVDLLD+GKKIKKTP+VVGNCTGFAVNRMFFPYTQAA  LVE G D YLIDRA
Sbjct: 466 NHTSAQVIVDLLDVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRA 525

Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
           I+KFGMPMGPFRL DLVGFGVAIAT  QFIENF ERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGF 585

Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
           YLYD++RKA PDPE+KK+IEKARS+SGV +DPK A LSEKDI+EM FFPVVNEACRVFAE
Sbjct: 586 YLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVVNEACRVFAE 645

Query: 481 GIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLA 540
           GIAVKAADLDIA +MGMGFPPYRGGIMFWADS+GSKYIYSRL+EWS  YGEFFKPCAFLA
Sbjct: 646 GIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLA 705

Query: 541 ERAGKGATLSAPVEEAKSKL 560
           ER  KG  LSAPV++A S+L
Sbjct: 706 ERGSKGVLLSAPVKQASSRL 725


>sp|O49809|MFPA_BRANA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           OS=Brassica napus PE=2 SV=2
          Length = 725

 Score =  949 bits (2453), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/560 (78%), Positives = 503/560 (89%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           M+LTSKPVK EE HSLGL+DAVV P +L++ AR+WALDI E R+PWV+++ KTDK+ PLG
Sbjct: 166 MILTSKPVKAEEGHSLGLIDAVVPPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLG 225

Query: 61  EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
           EAREI KFA+ Q R+QAPN+ HP++C++ VE G+VSG RAGL+KEA+   +++  +T K 
Sbjct: 226 EAREILKFAKDQTRRQAPNMKHPLMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKG 285

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+H+FF+QRGT+KVPGVTD GL PR++ KVAI+GGGLMGSGIATALILSNY VILKEVNE
Sbjct: 286 LIHVFFSQRGTTKVPGVTDRGLVPRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNE 345

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
           KFLEAGIGRV+ANLQSRVKKGKM++EKFEKT+SLL G LDYESF+DVDMVIEA+IEN+SL
Sbjct: 346 KFLEAGIGRVKANLQSRVKKGKMSKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISL 405

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           KQQIFADLEKYCP HCILASNTSTIDLN IGERT S+DRI+GAHFFSPAHVMPLLEIVRT
Sbjct: 406 KQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRT 465

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
           N TS QVIVDLLD+GKKI+KTP+VVGNCTGFAVNRMFFPYTQAA  LVE GTD YLID+A
Sbjct: 466 NHTSAQVIVDLLDVGKKIRKTPVVVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKA 525

Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
           ++KFGMPMGPFRL DLVGFGVAIAT  QFIENFPERTYKSMIIP+MQEDKRAGE TRKGF
Sbjct: 526 VSKFGMPMGPFRLCDLVGFGVAIATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGF 585

Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
           YLYD+RRKA PDPE+K +I+KARS+SG   DPK  KLSEK+I+EM FFPVVNEACRVFAE
Sbjct: 586 YLYDDRRKAKPDPEIKNYIDKARSVSGAKPDPKLEKLSEKEIIEMTFFPVVNEACRVFAE 645

Query: 481 GIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLA 540
           GIAVKAADLDIA + GMGFPPYRGGIMFWADS+GSKYIYS+LEEWS  YGEFFKPCAFLA
Sbjct: 646 GIAVKAADLDIAGIFGMGFPPYRGGIMFWADSIGSKYIYSKLEEWSKAYGEFFKPCAFLA 705

Query: 541 ERAGKGATLSAPVEEAKSKL 560
           ER  KGA LSAP+E+++S+L
Sbjct: 706 ERGSKGAPLSAPLEQSRSRL 725


>sp|Q39659|MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
           OS=Cucumis sativus PE=1 SV=1
          Length = 725

 Score =  943 bits (2437), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 442/560 (78%), Positives = 498/560 (88%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLTSKP+KG+EAHSLGLVDA+V P +L++TAR+WAL+ILE RRPWV +L++TDK+E L 
Sbjct: 166 MMLTSKPIKGQEAHSLGLVDAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLA 225

Query: 61  EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
           EAR+IF  ARAQA+KQ PNL H I CID VE GVVSGPRAGL KEAE+FQ LL S+TCKS
Sbjct: 226 EARKIFNLARAQAKKQYPNLKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKS 285

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+HIFFAQR T+KVPGVTDLGL PR++KKVAI+GGGLMGSGIATALILSNY V+LKEVN+
Sbjct: 286 LIHIFFAQRSTTKVPGVTDLGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVND 345

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
           KFL+AGI RVRANLQSRVKKG MT EKFEK+ISLL GVL+YESFKDVDMVIEA+IENVSL
Sbjct: 346 KFLQAGIDRVRANLQSRVKKGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSL 405

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           KQQIF+DLEKYCPPHC+LA+NTSTIDL LIGER  S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 406 KQQIFSDLEKYCPPHCMLATNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRT 465

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             T+ QVIVDLLD+GK IKKTP+VVGNCTGFAVNRMFFPY+QAA LL E G D Y IDRA
Sbjct: 466 KHTAAQVIVDLLDVGKNIKKTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRA 525

Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
           I+KFGMPMGPFRL DLVGFGVA AT  QF++ FPERTYKSM+IP+MQEDK AGE+TRKGF
Sbjct: 526 ISKFGMPMGPFRLCDLVGFGVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGF 585

Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
           Y+YD+ RKA P+PE+KK+IEKAR+ SGV++DPK  KL EKDIVEMIFFPVVNEACRV AE
Sbjct: 586 YVYDKNRKAGPNPELKKYIEKARNSSGVSVDPKLTKLPEKDIVEMIFFPVVNEACRVLAE 645

Query: 481 GIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLA 540
           GIAVKAADLDIA VMGMGFP YRGG+MFWADSLGS YIYSRLEEWS  YG FFKPC +LA
Sbjct: 646 GIAVKAADLDIAGVMGMGFPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLA 705

Query: 541 ERAGKGATLSAPVEEAKSKL 560
           ERA +GATLSAP   AK ++
Sbjct: 706 ERAVQGATLSAPGGHAKPRM 725


>sp|Q9ZPI6|AIM1_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1
           OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1
          Length = 721

 Score =  674 bits (1740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/560 (56%), Positives = 419/560 (74%), Gaps = 1/560 (0%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           M+L SK +  EE H LGL+DA+V P  ++ST+R+WALDI E R+P++ +L++TDKI  L 
Sbjct: 163 MILLSKSISSEEGHKLGLIDALVPPGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLS 222

Query: 61  EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
           EAR I K +R  A+K APN+     CI+V+E G++ G  +G+ KEAE F++L+ S+T K 
Sbjct: 223 EARAILKNSRQLAKKIAPNMPQHHACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKG 282

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           LVH+FFAQR TSKVP VTD+GL PR +KKVA++GGGLMGSGIATAL+LSN  V+LKE+N 
Sbjct: 283 LVHVFFAQRATSKVPNVTDVGLKPRPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINS 342

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
           +FL  GI  V AN++S V +GK+TQ+K  K +SL  GVLDY  F DVDMVIEA+IEN+ L
Sbjct: 343 EFLMKGIKSVEANMKSLVSRGKLTQDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQL 402

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           KQ IF ++EK C PHCILASNTSTIDL++IGE+T SKDRIVGAHFFSPAH+MPLLEIVR+
Sbjct: 403 KQNIFKEIEKVCSPHCILASNTSTIDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRS 462

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             TS QVI+DL+ +GK IKK P+VVGNC GFAVNR FFPY+QAA +L   G DL+ ID  
Sbjct: 463 KNTSAQVILDLMAVGKAIKKVPVVVGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSV 522

Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
           IT FG+P+GPF+L DL G G+ +A G  + + + +R ++S +  ++ +  R G+   +G+
Sbjct: 523 ITSFGLPLGPFQLGDLAGHGIGLAVGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGY 582

Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
           Y+Y++  K  PDP V   +EK+R ++ +    K   +++K+IVEMI FPVVNEACRV  E
Sbjct: 583 YIYEKGSKPKPDPSVLSIVEKSRKLTNIMPGGKPISVTDKEIVEMILFPVVNEACRVLDE 642

Query: 481 GIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLA 540
           G+ ++A+DLDIASV+GM FP YRGGI+FWAD++G KYIY RL++ S  YG FFKP  +L 
Sbjct: 643 GVVIRASDLDIASVLGMSFPSYRGGIVFWADTVGPKYIYERLKKLSETYGSFFKPSRYLE 702

Query: 541 ERAGKGATLSAPVEEAKSKL 560
           ERA  G  LS   + ++SKL
Sbjct: 703 ERAMNGMLLSES-KSSRSKL 721


>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation multifunctional protein
           OS=Oryza sativa subsp. japonica GN=MFP PE=1 SV=2
          Length = 726

 Score =  670 bits (1728), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/561 (55%), Positives = 422/561 (75%), Gaps = 2/561 (0%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MML SK +  +E    GLVDA+ +P++L+  +R WAL+I  +R+PW+ +L +TD++  L 
Sbjct: 163 MMLQSKFITAKEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLS 222

Query: 61  EAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
           EAR +   AR QA+K A NL     C+DV+E GV+ G  AG+ KEA+ F++L+ S T K+
Sbjct: 223 EARSVLNSARQQAKKVAANLPQHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKA 282

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           LVH FFAQR T+KVPGVTD+ L PR+++KVA++GGGLMGSGIATAL++SN  V+LKEVN 
Sbjct: 283 LVHAFFAQRLTTKVPGVTDVQLKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNP 342

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
           +FL+ G   + ANL+  VK+G +T++K  K +SLL G LDY  FKDVDMVIEA+IE + L
Sbjct: 343 QFLQRGQKMIAANLEGLVKRGSLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPL 402

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           KQ IF+DLEK CPPHCILA+NTSTIDLN++GE+T S+DRI+GAHFFSPAH+MPLLEIVRT
Sbjct: 403 KQSIFSDLEKVCPPHCILATNTSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRT 462

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
            +TSPQ I+DL+ +GK IKK P+VVGNCTGFAVNR FFPYTQ + LLV  G D++ IDR 
Sbjct: 463 EKTSPQAILDLITVGKMIKKVPVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRV 522

Query: 361 ITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTRKGF 420
           I+ FGMPMGPF+L DL G+GVA+A    +   F  R   S ++ +M ++ R G++  KG+
Sbjct: 523 ISSFGMPMGPFQLQDLAGYGVALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGY 582

Query: 421 YLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRVFAE 480
           YLY++  K  PDP V+  I++ R  +      K   LS++DI+EMIFFPVVNEACRV  E
Sbjct: 583 YLYEKGGKPKPDPSVQVVIDEYRRCAKTMPGGKPVTLSDQDILEMIFFPVVNEACRVMDE 642

Query: 481 GIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLA 540
            + ++A+DLDIAS++GMGFP +RGG++FWAD++G+ YI+S+L +W+ +YG+FFKP ++L 
Sbjct: 643 NVVIRASDLDIASILGMGFPKFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLE 702

Query: 541 ERAGKGATLSAP--VEEAKSK 559
           +RA +   LSAP   ++A S+
Sbjct: 703 DRAKRSLPLSAPNATQQASSR 723


>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
           O9:H4 (strain HS) GN=fadJ PE=3 SV=1
          Length = 714

 Score =  285 bits (728), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 185/560 (33%), Positives = 286/560 (51%), Gaps = 32/560 (5%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
           M+LT K ++ ++A  LGLVD VV P+ ++  A   A+++ +  RP    L   ++I   P
Sbjct: 167 MILTGKQLRAKQALKLGLVDDVV-PHSILLEA---AVELAKKDRPSSRPLPVRERILAGP 222

Query: 59  LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
           LG A       +    K   N       ++VVE G+  G  +G   EA  F +L  +   
Sbjct: 223 LGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQS 282

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
           ++L  IFFA     K PG +D   AP  +  V ILGGGLMG+GIA      +  PV +K+
Sbjct: 283 QALRSIFFASTDVKKDPG-SDAPPAP--LNSVGILGGGLMGAGIAYVTACKAGLPVRIKD 339

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +N + +   +      L+ +V++  +   + +K ++L++G  DY  F   D++IEA+ EN
Sbjct: 340 INPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFEN 399

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           + LKQQ+ A++E+ C  H I ASNTS++ +  I       ++++G HFFSP   MPL+EI
Sbjct: 400 LELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEI 459

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +    TS Q I   + + KK  KTPIVV +  GF VNR+  PY   A  ++  G  +  I
Sbjct: 460 IPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHI 519

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
           D A+ KFG P+GP +L D VG    I TG + I      + ER +  + ++  +  D R 
Sbjct: 520 DAALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRK 575

Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
           G    +GFYLY ++ + S    DP +   I                +LS   + E     
Sbjct: 576 GRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQ----------GRLSAPQVAERCVML 625

Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLY 529
           ++NEA R   E +     D DI +V G+GFPP+ GG   + DSLG+  + + ++  ++ Y
Sbjct: 626 MLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQY 685

Query: 530 GEFFKPCAFLAERAGKGATL 549
           G  F PC  L E   +G + 
Sbjct: 686 GSRFTPCERLVEMGARGESF 705


>sp|Q0HKD1|FADJ_SHESM Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
           (strain MR-4) GN=fadJ PE=3 SV=1
          Length = 709

 Score =  283 bits (725), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 192/553 (34%), Positives = 288/553 (52%), Gaps = 21/553 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E  G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223

Query: 61  EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I   + A+  A+K   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G  PR+VKK  ILGGGLMG GIA+     +  P  +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +NEK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ +  I +     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
           KGFY Y    KA   P  KK +++  S+ GV      ID + + ++E+ +V+M+     N
Sbjct: 582 KGFYQYAAGNKA---PSKKKAVDE--SVYGVLGIKPGIDKEMSAVAERCVVQML-----N 631

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           EA R   +GI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + + YG+ 
Sbjct: 632 EAVRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQAQYGDR 691

Query: 533 FKPCAFLAERAGK 545
           F+PC  L E A +
Sbjct: 692 FEPCPRLKEMAAE 704


>sp|Q0HWN3|FADJ_SHESR Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
           (strain MR-7) GN=fadJ PE=3 SV=1
          Length = 709

 Score =  283 bits (723), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 192/553 (34%), Positives = 287/553 (51%), Gaps = 21/553 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E  G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223

Query: 61  EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I   + A+  A+K   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G  PR+VKK  ILGGGLMG GIA+     +  P  +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +NEK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ +  I +     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V             ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILETELGERFKAPAAFDKLLSDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
           KGFY Y    KAS     KK +++  S+ GV      ID + + ++E+ +V+M+     N
Sbjct: 582 KGFYQYAAGNKASSK---KKVVDE--SVYGVLGIKPGIDKEMSAVAERCVVQML-----N 631

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           EA R   +GI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + + YG+ 
Sbjct: 632 EAVRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQAQYGDR 691

Query: 533 FKPCAFLAERAGK 545
           F+PC  L E A +
Sbjct: 692 FEPCPRLKEMAAE 704


>sp|Q48GW3|FADB_PSE14 Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
           pv. phaseolicola (strain 1448A / Race 6) GN=fadB PE=3
           SV=1
          Length = 721

 Score =  279 bits (714), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 180/566 (31%), Positives = 290/566 (51%), Gaps = 42/566 (7%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
           + K    E+A  +G VDAVVAP +L       +  A     D    R+P      K DK+
Sbjct: 170 SGKESSAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223

Query: 57  EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
           + L    ++  F  A+   A +  PN   P+  I  ++     G    L+ EA  F K+ 
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMA 282

Query: 114 RSETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
           ++   +SL+ +F   +   K     D     + VK+ A+LG G+MG GIA    +   P+
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDA--VAKDVKQAAVLGAGIMGGGIAYQSAVKGTPI 340

Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
           ++K++ E+ ++ G+      L  R++KG++T  K  + ++ +   L Y  F +VD+V+EA
Sbjct: 341 LMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEA 400

Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
           ++EN  +KQ + A++E     H ILASNTSTI ++L+ +     +  VG HFF+P H+MP
Sbjct: 401 VVENPKVKQAVLAEVEANVGEHTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMP 460

Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
           L+E++R  ++S + +   +   +K+ K PIVV +C GF VNR+ FPY      LV  G D
Sbjct: 461 LVEVIRGEKSSEEAVATTVAYARKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVD 520

Query: 354 LYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKR 411
              ID+ + KFG PMGP  L D+VG            E FP+R    +  ++  + E KR
Sbjct: 521 FVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSVVDALYEAKR 580

Query: 412 AGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIV 463
            G+   KGFY Y+  +K  P    DP V    K  + + R            ++S++DI+
Sbjct: 581 LGQKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDII 628

Query: 464 EMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLE 523
             +  P+  E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  +
Sbjct: 629 NWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALAD 688

Query: 524 EWSSLYGEFFKPCAFLAERAGKGATL 549
           +++ L G  ++P A L E A KG + 
Sbjct: 689 QYAEL-GALYQPTAKLREMASKGQSF 713


>sp|Q6NYL3|ECHP_DANRE Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1
          Length = 718

 Score =  279 bits (714), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 188/582 (32%), Positives = 300/582 (51%), Gaps = 42/582 (7%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDI----LEHRRPWVATLYKTDKI 56
           ++ T + V  +EA  LG+VD V   N     A ++AL      L  RR  + T      +
Sbjct: 150 LITTGRHVSAQEALKLGMVDQVTEQNT-CEVALEFALKAVGKPLSSRRLSMLTTPCPPGL 208

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           +       IF+ A  Q +K+A  +  P+ C+  V A  +     G+++E E    L  S 
Sbjct: 209 D------GIFEAATMQVQKKARGVMAPLACVQAVRAATLPYSE-GIKREGELMATLFSSG 261

Query: 117 TCKSLVHIFFAQRGTSK--VP-GVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPV 173
             ++L + FFAQR   K  +P G       PR ++  A++G G MG GI  +L      V
Sbjct: 262 QAQALQYSFFAQRTAEKWTLPSGAQWNNSKPREIQSAAVIGLGTMGRGIVVSLARVGISV 321

Query: 174 ILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEA 233
           I  E  +K LE G   V   L+   K+  ++      +++LL   L  +  KDVD+VIEA
Sbjct: 322 IAVESEKKLLETGRQMVIGMLERDAKRRGVS-----ASLNLLKFSLSLQDLKDVDLVIEA 376

Query: 234 IIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMP 293
           + E+++LK+QIF +L + C P  +L SNTS +D++ + + T     + G HFFSPAHVM 
Sbjct: 377 VFEDMALKKQIFRELSRVCRPATLLCSNTSGLDVDALADVTDRPQLVAGMHFFSPAHVMK 436

Query: 294 LLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTD 353
           LLE+V   ++S + I   + +GK++ K  + VGNC GF  NRM  PY + A  L+E G  
Sbjct: 437 LLEVVCGPRSSKEAIATAMSLGKRMGKVSVAVGNCPGFVGNRMLMPYLEQATFLLEEGAT 496

Query: 354 LYLIDRAITKFGMPMGPFRLADL----VGFGVAIATGMQFIE----NFPERTYKSMIIPI 405
              ID+A+  FG  MG FR++DL    VG+ V   +G+   +    + P R       PI
Sbjct: 497 PQQIDKALEDFGFAMGVFRMSDLAGLDVGWRVRKESGLTGPDVDPKDPPRRRQGRKYCPI 556

Query: 406 ---MQEDKRAGETTRKGFYLYDE--RRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEK 460
              + +  R G+ T +G+Y+YD+     A PDP ++  +E  RS  G  I P+  K++++
Sbjct: 557 PDMVCQQGRFGQKTGRGWYMYDKPGDTNAKPDPLIQNLLETYRSRYG--IQPR--KITDQ 612

Query: 461 DIVEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYS 520
           +I+E   F + NE  R+  + IA +  D+D+  + G GFP +RGG MF+A  +G + +  
Sbjct: 613 EIIERCLFALANEGFRILKDKIAGQPEDIDVIYLFGYGFPRHRGGPMFYASMVGLERVLE 672

Query: 521 RLEEWSSLYGE--FFKPCAFLAERAGKGATLSAPVEEAKSKL 560
           RLE +     +    +P   L +   +G   S P+++ +  +
Sbjct: 673 RLEYYHHALPDVPHLEPSPLLKKLVARG---SPPIQKWREHI 711


>sp|A0KV76|FADJ_SHESA Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
           (strain ANA-3) GN=fadJ PE=3 SV=1
          Length = 709

 Score =  278 bits (712), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 189/552 (34%), Positives = 286/552 (51%), Gaps = 19/552 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E  G
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSLV-NQLLEGTG 223

Query: 61  EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I   + A+   +K   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQAAKQVVKKTQGNYPAPAKIIDCVRQGMAKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G  PR+VKK  ILGGGLMG GIA+     +  P  +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +NEK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 342 INEKGLSNALSYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ +  I +     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSIEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKIAPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
           KGFY Y    KAS   + K   E   ++ G+   +D   + ++E+ +V+M+     NEA 
Sbjct: 582 KGFYQYAAGNKAS--SKKKAVDESVYAVLGIKPGMDKDLSAVAERCVVQML-----NEAV 634

Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKP 535
           R   +GI     D DI ++ G+GFPP+ GG   + D+LG+  + + LE + + YG+ F+P
Sbjct: 635 RCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVNILERYQAQYGDRFEP 694

Query: 536 C----AFLAERA 543
           C    A  AE+A
Sbjct: 695 CPRLKAMAAEKA 706


>sp|A3QFP3|FADJ_SHELP Fatty acid oxidation complex subunit alpha OS=Shewanella loihica
           (strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1
          Length = 706

 Score =  277 bits (709), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 195/555 (35%), Positives = 291/555 (52%), Gaps = 25/555 (4%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWAL-DILEHRRPWVATLYKTDKIEPL 59
           MMLT K ++ ++A  +GLVD VV  + L+ TA + AL      ++P ++T+ K  +  P+
Sbjct: 165 MMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMALAGARPAKKPKLSTVEKLLEGTPV 224

Query: 60  GEAREIFKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
           G    IF+ A  Q  K+   N   P   ID V  GV  G   GL+ EA+ F  L+ S   
Sbjct: 225 GR-NIIFEQALKQVNKKTQGNYPAPEKIIDCVRQGVTKGIVKGLEVEAQHFGDLVVSNES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G  D+  +P+ V KV +LGGGLMG GIA+     +  PV +K+
Sbjct: 284 EALRSIFFATTEMKKESGAGDV--SPKAVNKVMVLGGGLMGGGIASVTTTKAKIPVRVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           ++E  L   +      L   VK+  MT    +  ++L+T   +Y+  KD DMV+EA+ E+
Sbjct: 342 ISEIGLSNALAYAYKLLAKGVKRRHMTPAVRDNLMALMTTTTEYKGIKDADMVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ +  I E     + ++G H+FSP   MPL+E+
Sbjct: 402 LNLKHQMVKDVERECGEHTIFASNTSSLPIKQIAEAAERPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +  ++TSPQ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHDKTSPQTIATTVAFARKQGKTPIVVKDGAGFYVNRILALYMNEAANLLLEGQSVDHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLADDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AIDPKFAKLSEKDIVEMIFFPVVN 472
           KGFY Y  + K       KK +++  S+ GV       D +   L+E+ +V+M+     N
Sbjct: 582 KGFYQYGAKSK-------KKLVDE--SVYGVLGLTPGADGEPIALAERCVVQML-----N 627

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           EA R   EGI     D DI ++ G+GFPP+ GG   + DSLG+K++   L+ +   +G+ 
Sbjct: 628 EAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGDR 687

Query: 533 FKPCAFLAERAGKGA 547
           F PC  L E A  G+
Sbjct: 688 FAPCDRLVEMAESGS 702


>sp|Q87ZB2|FADB_PSESM Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
           pv. tomato (strain DC3000) GN=fadB PE=3 SV=1
          Length = 721

 Score =  277 bits (708), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 179/567 (31%), Positives = 291/567 (51%), Gaps = 44/567 (7%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
           + K    E+A  +G+VDA+VAP +L       +  A     D    R+P      K DK+
Sbjct: 170 SGKENSAEDALKVGVVDAIVAPEKLQAAALDLIQRAISGEFDYKAKRQP------KLDKL 223

Query: 57  EPLGEAREIFKFARAQ---ARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLL 113
           + L    ++  F  A+   A +  PN   P+  I  ++   + G    L+ EA  F K+ 
Sbjct: 224 K-LNAIEQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAAIFGRDKALEIEAAGFVKMA 282

Query: 114 RSETCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYP 172
           ++   +SL+ +F   Q    K  G  ++    R VK+ A+LG G+MG GIA    +   P
Sbjct: 283 KTSAAQSLIGLFLNDQELKKKAKGYDEVA---RDVKQAAVLGAGIMGGGIAYQSAVKGTP 339

Query: 173 VILKEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIE 232
           +++K++ E+ ++ G+      L  R++KG++T  K  + ++ +   L Y  F +VD+V+E
Sbjct: 340 ILMKDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVE 399

Query: 233 AIIENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVM 292
           A++EN  +KQ + A++E     + ILASNTSTI ++L+ +     +  VG HFF+P H+M
Sbjct: 400 AVVENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMM 459

Query: 293 PLLEIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGT 352
           PL+E++R  ++S + +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G 
Sbjct: 460 PLVEVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGV 519

Query: 353 DLYLIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDK 410
           D   ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  
Sbjct: 520 DFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEAN 579

Query: 411 RAGETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDI 462
           R G+   KGFY+Y+  +K  P    DP V    K  + + R            ++S++DI
Sbjct: 580 RLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDI 627

Query: 463 VEMIFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRL 522
           +  +  P+  E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  
Sbjct: 628 INWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALA 687

Query: 523 EEWSSLYGEFFKPCAFLAERAGKGATL 549
           + ++ L G  ++P A L E A  G + 
Sbjct: 688 DRYAEL-GALYQPTAKLREMAANGQSF 713


>sp|A1S7L6|FADJ_SHEAM Fatty acid oxidation complex subunit alpha OS=Shewanella
           amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadJ PE=3
           SV=1
          Length = 706

 Score =  277 bits (708), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 193/554 (34%), Positives = 284/554 (51%), Gaps = 18/554 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           +MLT K V+ ++A  +GLVD VV  + L+ TA + AL   + R+P    L  T  +E   
Sbjct: 165 LMLTGKQVRPKQAVKMGLVDDVVPESILLDTAIEMALAGKKTRKPLKQPLV-TKLLEGTP 223

Query: 61  EAREI-FKFARAQA-RKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I F  A  Q  +K   N   P+  ID V  G+  G   GL+ EA  F  L+ +   
Sbjct: 224 VGRNIMFDQATKQVLKKTQGNYPSPLKIIDCVREGMAKGMEKGLEVEAAHFGALVATPES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
            +L  IFFA     K  G  D    PR+V K  +LGGGLMG GIA+     +  PV +K+
Sbjct: 284 AALRSIFFATTEMKKETGAGDA--KPRKVAKAVVLGGGLMGGGIASVTTTKAKVPVRVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +++K L   +G     L   VK+  MT  + +K ++L+T   +Y   KD D+V+EA+ E+
Sbjct: 342 ISDKGLSNALGYAYKLLDKGVKRRHMTSAERDKLMALMTTTTEYRGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ +  I       + ++G H+FSP   MPL+E+
Sbjct: 402 LNLKHQMVRDIERECGEHTIFASNTSSLPITQIAAAASRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +C GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHEKTSPETIATTVAFARKQGKTPIVVKDCAGFYVNRILALYMNEAAQLLLEGQAVDHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLMADDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
           KGFYLY +  K     +     E   S+ G+  A   +  +++E+ +V+M+     NEA 
Sbjct: 582 KGFYLYGKAAKKGKKVD-----ESVYSLLGLTPATGKEAGEIAERCVVQML-----NEAV 631

Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKP 535
           R   EGI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + S YG+ F P
Sbjct: 632 RCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDTLGAAKMVRLLEGYQSKYGDRFAP 691

Query: 536 CAFLAERAGKGATL 549
            A L   A +G T 
Sbjct: 692 AALLKAMAAEGKTF 705


>sp|Q8ECP7|FADJ_SHEON Fatty acid oxidation complex subunit alpha OS=Shewanella oneidensis
           (strain MR-1) GN=fadJ PE=3 SV=1
          Length = 707

 Score =  276 bits (707), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 188/552 (34%), Positives = 283/552 (51%), Gaps = 23/552 (4%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL   +  +P   +L     +E  G
Sbjct: 167 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKQIAKPVKKSLV-NQLLEGTG 225

Query: 61  EAREIF--KFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I   + A+  A+K   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 226 FGRNIIFDQAAKQVAKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 285

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G  PR+VKK  ILGGGLMG GIA+     +  P  +K+
Sbjct: 286 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPARVKD 343

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +NEK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 344 INEKGLSNALSYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 403

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ +  I +     + ++G H+FSP   MPL+E+
Sbjct: 404 LALKHQMVKDIERECGEHTIFASNTSSLPIGQIAQAASRPENVIGLHYFSPVEKMPLVEV 463

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 464 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 523

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 524 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 583

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
           KGFY Y    K       K   E    + G+   +D + + ++E+ +V+M+     NEA 
Sbjct: 584 KGFYQYGAASKK------KAVDETVYGVLGIKPGVDKEMSAVAERCVVQML-----NEAV 632

Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKP 535
           R    GI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + + YG+ F+P
Sbjct: 633 RCLDAGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVKILERYQTQYGDRFEP 692

Query: 536 C----AFLAERA 543
           C    A  AE+A
Sbjct: 693 CQRLKAMAAEKA 704


>sp|A4WCW6|FADJ_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp.
           (strain 638) GN=fadJ PE=3 SV=1
          Length = 715

 Score =  275 bits (704), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 186/554 (33%), Positives = 290/554 (52%), Gaps = 32/554 (5%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
           M+LT K ++  +A  +GLVD VV P+ ++ TA   A+++ +  R     L   ++I   P
Sbjct: 167 MILTGKQLRPRQALKVGLVDEVV-PHSILLTA---AVELAQKERQASRHLPVRERILAGP 222

Query: 59  LGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
           LG A    +  +   +K   N       +DV+E G+  G  +G   EA+ F +L  +   
Sbjct: 223 LGRALLFNRVGKKTEQKTKGNYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQS 282

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKE 177
           ++L  IFFA     K PG     +AP  +  + +LGGGLMG GI+         PV +K+
Sbjct: 283 QALRSIFFASTEVKKDPGSE---VAPGPLNAIGVLGGGLMGGGISFVTASKGKLPVRIKD 339

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           +N K +   +      L  +VK+  +   + ++ ++L++G +D+  FK  D+VIEA+ E+
Sbjct: 340 INAKGINHALQYSWQLLDQKVKRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFED 399

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           + LKQQ+ AD+E+YC PH I ASNTS++ +  I       ++++G HFFSP   MPL+E+
Sbjct: 400 LQLKQQMVADVEQYCAPHTIFASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEV 459

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +    TS Q +  ++ + K+  KTPIVV +  GF VNR+  PY   A  L+  G  +  +
Sbjct: 460 IPHESTSAQTVATVVKLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENV 519

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRA 412
           D A+ KFG P+GP +L D VG    I TG + I      + ER +  + ++  +  D R 
Sbjct: 520 DDALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSPPANVVSAILNDDRK 575

Query: 413 GETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
           G    +GFYLY  + + S    DP V   I  +             KL+ +   E     
Sbjct: 576 GRKNGRGFYLYAAKGRKSKKQVDPSVYGLINASGQ----------GKLTAQQCAERCVMM 625

Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLY 529
           ++NEA R F E +   A D DI +V G+GFPP+ GG   + DSLG+  + + L+  +SLY
Sbjct: 626 MLNEAARCFDEKVIKNARDGDIGAVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLASLY 685

Query: 530 GEFFKPCAFLAERA 543
           G  F PC  L + A
Sbjct: 686 GSRFTPCETLKQMA 699


>sp|Q4ZRA0|FADB_PSEU2 Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae
           pv. syringae (strain B728a) GN=fadB PE=3 SV=1
          Length = 721

 Score =  273 bits (697), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 181/564 (32%), Positives = 286/564 (50%), Gaps = 38/564 (6%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
           + K    E+A  +G VDAVVAP +L       +  A     D    R+P +  L K + I
Sbjct: 170 SGKENAAEDALKVGAVDAVVAPEKLQAAALDLIQRAISGEFDYKAKRQPKLDKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F K+ ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEIEAAGFVKMAKTP 285

Query: 117 TCKSLVHIFFA-QRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
             +SL+ +F   Q    K  G   +    + VK+ A+LG G+MG GIA    +   P+++
Sbjct: 286 AAQSLIGLFLNDQELKKKARGYDKIA---KDVKQAAVLGAGIMGGGIAYQSAVKGTPILM 342

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++ E+ ++ G+      L  R++KG++T  K  + ++ +   L Y  F +VD+V+EA++
Sbjct: 343 KDIREEAIQLGLNEASKLLGGRLEKGRLTAAKMAEALNAIRPTLSYGDFGNVDLVVEAVV 402

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +KQ + A++E     + ILASNTSTI ++L+ +     +  VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQAVLAEVEANVGENTILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           E++R  ++S + +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D  
Sbjct: 463 EVIRGEKSSEEAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFV 522

Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAG 413
            ID+ + KFG PMGP  L D+VG            E FP+R    +   I  + + KR G
Sbjct: 523 RIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYDAKRLG 582

Query: 414 ETTRKGFYLYDERRKASP----DPEV----KKFIEKARSMSGVAIDPKFAKLSEKDIVEM 465
           +   KGFY Y+  +K  P    DP V    K  + + R            ++S++DIV  
Sbjct: 583 QKNGKGFYAYETDKKGKPKKVNDPAVLDVLKPIVYEQR------------EVSDEDIVNW 630

Query: 466 IFFPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEW 525
           +  P+  E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  +++
Sbjct: 631 MMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADQY 690

Query: 526 SSLYGEFFKPCAFLAERAGKGATL 549
           + L G  ++P A L E A  G + 
Sbjct: 691 AEL-GALYQPTAKLREMAANGQSF 713


>sp|Q4KFC4|FADB_PSEF5 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadB PE=3
           SV=1
          Length = 715

 Score =  273 bits (697), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 183/559 (32%), Positives = 282/559 (50%), Gaps = 28/559 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP++L       V  A     D    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLKDAALALVKRAISGEFDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   K     D     + VK+ A+LG G+MG GIA        P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++NE  +E G+      L  RV KG+MT  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI ++L+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQIVLAEVEGQVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   + ++ E KR G+
Sbjct: 524 IDKIMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDVLYEAKRLGQ 583

Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  +K       DP V + ++         I  +  +++++DI+  +  P+
Sbjct: 584 KNGKGFYAYETDKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-G 694

Query: 531 EFFKPCAFLAERAGKGATL 549
             + P A L E A  G + 
Sbjct: 695 ALYHPTAKLREMAKNGQSF 713


>sp|Q9HZJ2|FADB_PSEAE Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
           LMG 12228) GN=fadB PE=3 SV=1
          Length = 715

 Score =  272 bits (696), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 28/556 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
           + K  K E+A  +G VDAVVAP QL + A   A       LD    R+P +  L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   K     D     + VK  A+LG G+MG GIA    L   P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L  RV+KG++T  K  + ++ +   + Y  F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       I+ASNTSTI ++L+ +     +   G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  +T    I   +   KK+ K+PIVV +C GF VNR+ FPY      L+  G D   
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L+D+VG            E FP+R        + +M E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  ++  P    DP+  + ++       + ++ +  +++++DIV  +  P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAEL-G 694

Query: 531 EFFKPCAFLAERAGKG 546
             + P A L E A  G
Sbjct: 695 ALYHPTAKLREMAKNG 710


>sp|Q02PH8|FADB_PSEAB Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           aeruginosa (strain UCBPP-PA14) GN=fadB PE=3 SV=1
          Length = 715

 Score =  272 bits (696), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 28/556 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
           + K  K E+A  +G VDAVVAP QL + A   A       LD    R+P +  L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   K     D     + VK  A+LG G+MG GIA    L   P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L  RV+KG++T  K  + ++ +   + Y  F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       I+ASNTSTI ++L+ +     +   G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  +T    I   +   KK+ K+PIVV +C GF VNR+ FPY      L+  G D   
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L+D+VG            E FP+R        + +M E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  ++  P    DP+  + ++       + ++ +  +++++DIV  +  P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAEL-G 694

Query: 531 EFFKPCAFLAERAGKG 546
             + P A L E A  G
Sbjct: 695 ALYHPTAKLREMAKNG 710


>sp|B7UYR6|FADB_PSEA8 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           aeruginosa (strain LESB58) GN=fadB PE=3 SV=1
          Length = 715

 Score =  272 bits (696), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 28/556 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
           + K  K E+A  +G VDAVVAP QL + A   A       LD    R+P +  L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   K     D     + VK  A+LG G+MG GIA    L   P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L  RV+KG++T  K  + ++ +   + Y  F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       I+ASNTSTI ++L+ +     +   G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  +T    I   +   KK+ K+PIVV +C GF VNR+ FPY      L+  G D   
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLSFGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L+D+VG            E FP+R        + +M E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  ++  P    DP+  + ++       + ++ +  +++++DIV  +  P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAEL-G 694

Query: 531 EFFKPCAFLAERAGKG 546
             + P A L E A  G
Sbjct: 695 ALYHPTAKLREMAKNG 710


>sp|A6V382|FADB_PSEA7 Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           aeruginosa (strain PA7) GN=fadB PE=3 SV=1
          Length = 715

 Score =  272 bits (695), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 179/556 (32%), Positives = 285/556 (51%), Gaps = 28/556 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWA-------LDILEHRRPWVATLYKTDKI 56
           + K  K E+A  +G VDAVVAP QL + A   A       LD    R+P +  L K + I
Sbjct: 170 SGKENKAEDALKVGAVDAVVAPEQLQAAALDLAKRAVAGELDHKARRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   K     D     + VK  A+LG G+MG GIA    L   P+++K
Sbjct: 286 VAQSLIGLFLNDQELKKKAKKYDE--VAKDVKLAAVLGAGIMGGGIAYQSALKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L  RV+KG++T  K  + ++ +   + Y  F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLNEAAKLLGKRVEKGRLTPAKMAEALNGIRPTMSYGDFGNVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       I+ASNTSTI ++L+ +     +   G HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGAVKEDAIIASNTSTISISLLAQALKRPENFCGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  +T    I   +   KK+ K+PIVV +C GF VNR+ FPY      L+  G D   
Sbjct: 464 VIRGEKTGETAIATTVAYAKKMGKSPIVVNDCPGFLVNRVLFPYFGGFAKLLGFGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L+D+VG            E FP+R        + +M E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  ++  P    DP+  + ++       + ++ +  +++++DIV  +  P+
Sbjct: 584 KNGKGFYAYETDKRGKPKKVTDPQAYEVLKP------IVVEQR--EVTDEDIVNFMMIPL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYAEL-G 694

Query: 531 EFFKPCAFLAERAGKG 546
             + P A L E A  G
Sbjct: 695 ALYHPTAKLREMAKNG 710


>sp|Q3K9D8|FADB_PSEPF Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           fluorescens (strain Pf0-1) GN=fadB PE=3 SV=1
          Length = 715

 Score =  271 bits (694), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 182/552 (32%), Positives = 278/552 (50%), Gaps = 28/552 (5%)

Query: 11  EEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           E+A  +G VDAVVAP        +L+  A     D    R+P +  L + + IE +    
Sbjct: 177 EDALKVGAVDAVVAPEKLQDAALELIKRAVSGEFDYKAKRQPKLEKL-RLNAIEQMMAFE 235

Query: 64  EIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKSLVH 123
               F   QA    PN   P+  I  ++     G    L+ EA  F KL ++   +SL+ 
Sbjct: 236 TAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIG 292

Query: 124 IFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNEKFL 183
           +F   +   K     D     + VK+ A+LG G+MG GIA        P+++K++NE  +
Sbjct: 293 LFLNDQELKKKAKAYDE--IAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGI 350

Query: 184 EAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSLKQQ 243
           E G+      L  RV KG+MT  K  + ++ +   L Y  F  VD+V+EA++EN  +KQ 
Sbjct: 351 EQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQA 410

Query: 244 IFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRTNQT 303
           + A++E       ILASNTSTI ++L+ +     +  VG HFF+P H+MPL+E++R  ++
Sbjct: 411 VLAEVEDKVKEDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKS 470

Query: 304 SPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRAITK 363
           S   I   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   ID+ + K
Sbjct: 471 SELAIATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEK 530

Query: 364 FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGETTRKGFY 421
           FG PMGP  L D+VG            E FP+R    +   I ++ E KR G+   KGFY
Sbjct: 531 FGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFY 590

Query: 422 LYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEACRV 477
            Y+  +K       DP V + ++         I  +  +++++DI+  +  P+  E  R 
Sbjct: 591 AYEADKKGKQKKVADPSVLEVLK--------PIVYEQREVTDEDIINWMMIPLCLETVRC 642

Query: 478 FAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCA 537
             +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  + P A
Sbjct: 643 LEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GALYHPTA 701

Query: 538 FLAERAGKGATL 549
            L E A  G + 
Sbjct: 702 KLREMAKNGQSF 713


>sp|C3K613|FADB_PSEFS Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           fluorescens (strain SBW25) GN=fadB PE=3 SV=1
          Length = 715

 Score =  271 bits (693), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 184/559 (32%), Positives = 279/559 (49%), Gaps = 28/559 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQW-------ALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP++L   A            D    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPDKLAEAALNLIKGAISGEFDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMSFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   K     D     R VK+ A+LG G+MG GIA        P+++K
Sbjct: 286 AAQSLIGLFLNDQELKKKAKAYDE--IARDVKQAAVLGAGIMGGGIAYQSASKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++NE  +E G+      L  RV KG+MT  K  + ++ +   L Y  F  VD+V+EA++E
Sbjct: 344 DINEHGIEQGLAEAAKLLVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI ++L+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEAQVKDDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSELAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   I  + E KR G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQ 583

Query: 415 TTRKGFYLYDERRKAS----PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  +K       DP V +       ++ V  + +  ++S++DI+  +   +
Sbjct: 584 KNGKGFYAYEADKKGKQKKVADPSVHEV------LAPVIYEQR--EVSDEDIINWMMIAL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADKYADL-G 694

Query: 531 EFFKPCAFLAERAGKGATL 549
             + P A L E A  G + 
Sbjct: 695 PLYHPTAKLREMAKNGQSF 713


>sp|A4XSM8|FADB_PSEMY Fatty acid oxidation complex subunit alpha OS=Pseudomonas mendocina
           (strain ymp) GN=fadB PE=3 SV=1
          Length = 715

 Score =  271 bits (692), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 181/557 (32%), Positives = 287/557 (51%), Gaps = 30/557 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
           + K  K  +A  +G VDAVVAP +L       V  A    LD    R+P +  L K + I
Sbjct: 170 SGKENKAADALKVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
           E +      F+ A+     QA PN   P+  I  ++     G    L+ EA  F KL ++
Sbjct: 229 EQM----MCFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKT 284

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              +SL+ +F   +   K     D     R VK  A+LG G+MG GIA        P+++
Sbjct: 285 SVAESLIGLFLNDQELKKKAKHHDE--IARDVKLAAVLGAGIMGGGIAYQSASKGTPILM 342

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++ E+ ++ G+      L  RV+KG+MT  K  + ++ +   + Y  F +VD+V+EA++
Sbjct: 343 KDIREEGIQMGLTEASKLLGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVV 402

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +KQ + A++E       ILASNTSTI ++L+ +     +  VG HFF+P H+MPL+
Sbjct: 403 ENPKVKQIVLAEVEDVVREDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLV 462

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           E++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      L+  G D  
Sbjct: 463 EVIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFV 522

Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPER--TYKSMIIPIMQEDKRAG 413
            ID+ + KFG PMGP  L+D+VG            E FP+R        + +M E  R G
Sbjct: 523 RIDKVMEKFGWPMGPAYLSDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLG 582

Query: 414 ETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFP 469
           +   KGFY Y+  ++  P    DPE  + ++       + ++ +  +++++DI+  +  P
Sbjct: 583 QKNGKGFYAYETDKRGKPKKVSDPEAYELLKS------IVVEER--EVTDEDIINFMMIP 634

Query: 470 VVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLY 529
           +  E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  ++++ L 
Sbjct: 635 LCLETVRCLEDGIVDTAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADKYADL- 693

Query: 530 GEFFKPCAFLAERAGKG 546
           G  + P A L E A KG
Sbjct: 694 GALYHPTAKLREMAAKG 710


>sp|Q9AHY3|FADB_PSEPU Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
           GN=fadB PE=3 SV=2
          Length = 715

 Score =  270 bits (690), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 281/554 (50%), Gaps = 24/554 (4%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
           + K  + E+A  +G VDAVVAP         L+  A    LD    R+P +  L K + I
Sbjct: 170 SGKENRAEDALKVGAVDAVVAPELLQAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   +     D       VK+ A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L +RV KG++T  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVDKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI +NL+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
              KGFY Y+  ++  P    KK  + A    +  +  + +  +++++DI+  +  P+  
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDAAVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GPL 696

Query: 533 FKPCAFLAERAGKG 546
           + P A L E A  G
Sbjct: 697 YHPTAKLREMAKNG 710


>sp|A6WQ25|FADJ_SHEB8 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
           (strain OS185) GN=fadJ PE=3 SV=1
          Length = 706

 Score =  270 bits (689), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 190/551 (34%), Positives = 281/551 (50%), Gaps = 16/551 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E   
Sbjct: 165 MMLTGKKIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223

Query: 61  EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I F  A  Q  K+   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G +PR+VKK  ILGGGLMG GIA+     +  PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           ++EK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ ++ I E     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLSDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV-AIDPKFAKLSEKDIVEMIFFPVVNEACR 476
           KGFY Y    K +      K +++  S+ GV  I P   K   K + E     ++NEA R
Sbjct: 582 KGFYQYGASSKKA------KAVDE--SVYGVLGIKPGTNK-DAKAVAERCVVQMLNEAVR 632

Query: 477 VFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPC 536
              +GI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + S +G  F+PC
Sbjct: 633 CLEDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILESYQSQFGNRFEPC 692

Query: 537 AFLAERAGKGA 547
             L   A + A
Sbjct: 693 ERLKTMAQENA 703


>sp|A3CYJ4|FADB_SHEB5 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
           (strain OS155 / ATCC BAA-1091) GN=fadB PE=3 SV=1
          Length = 716

 Score =  270 bits (689), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/539 (32%), Positives = 268/539 (49%), Gaps = 20/539 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           T K  + E+A  +G VDAVVAP  L + A Q   D +  +  W A   +      L +  
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228

Query: 64  EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
            +  F  A+    A    H   P+  + V+E     G    LQ E + F KL +++  K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+ IF   +           G   + V   A+LG G+MG GIA        P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
             L+ G+      L ++V +G+ T EK  K ++ +T  LDY + K  D+V+EA++E+  +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           K Q+ A++E Y     I+ASNTSTI +NL+ +     +R  G HFF+P H MPL+EI+R 
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEIIRG 466

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             +S + I  ++    K+ KTPIVV +C GF VNR+ FPY      L+  G D   ID+ 
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526

Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
           + K FG PMGP  L D+VG            E FP+R  KS    I +M E+KR G+   
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586

Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
           KGFY+Y    +  P    DP     ++ A          +       DI+     P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638

Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
             R   EGI    A+ D+  V G+GFPP+RGG+  + D++G     +  ++++ L G +
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLY 697


>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
           fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
           GN=fadJ PE=3 SV=1
          Length = 714

 Score =  269 bits (688), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 191/559 (34%), Positives = 297/559 (53%), Gaps = 30/559 (5%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           M+LT K ++  +A   GLVD +V  + L+  A + A    E + P    + +     PLG
Sbjct: 167 MILTGKQLRPGQALKSGLVDEIVPQSILLQAAVERAKQ--ERQTPRSLPVRERILAGPLG 224

Query: 61  EAREIFKF-ARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCK 119
            +  +F+F ++   +K   N       +DV+E G+  G  +G   EA  F +L  +   +
Sbjct: 225 RSL-LFRFVSKKTDQKTQGNYPATTRILDVIETGLSQGSSSGYDAEARAFGELAMTSQSQ 283

Query: 120 SLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVILKEV 178
           SL +IFFA     K PG T   + P  +  + ILGGGLMG GIA      +  PV +K++
Sbjct: 284 SLRNIFFASTEVKKDPGST---VQPGTLDSIGILGGGLMGGGIAFVTACKAGLPVRIKDI 340

Query: 179 NEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENV 238
           N + +   +      L ++V++  +   +  + ++ ++G  DY+ F   D+VIEA+ E++
Sbjct: 341 NPQGINHALKYSWQLLDAKVRRRHIKAGEQARQLAKISGTTDYQGFAHRDVVIEAVFEDL 400

Query: 239 SLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIV 298
           SLKQQ+ A++EK C  H I ASNTS+I ++ I       ++++G HFFSP   MPL+E++
Sbjct: 401 SLKQQMVAEVEKNCGLHTIFASNTSSIPISDIAAHATRPEQVIGLHFFSPVEKMPLVEVI 460

Query: 299 RTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLID 358
               TS + I  ++ + KK  KTPIVV +  GF VNR+  PY   A  L+  G  +  ID
Sbjct: 461 PHAATSEKTIATIVKLAKKQGKTPIVVQDKAGFYVNRILAPYINEAIRLLTEGEKVETID 520

Query: 359 RAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDKRAG 413
            A+ KFG P+GP +L D VG    I TG + I      + ER +  + ++  +  D R G
Sbjct: 521 TALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLEAAYGERFSAPANVVSSILNDDRKG 576

Query: 414 ETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
               +GFYLY  + + S    DPE+ K I         A+  + +KLS + I E     +
Sbjct: 577 RKNGRGFYLYGAKGRKSKKQVDPEIYKII---------AVQGQ-SKLSAQQITERCVMLM 626

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
           +NEA R + EG+   A D DI +V G+GFPP+ GG   + DSLG+  + + L+  +SLYG
Sbjct: 627 LNEAARCYREGVIRHARDGDIGAVFGIGFPPFLGGPFRYMDSLGASEVVAVLQRLTSLYG 686

Query: 531 EFFKPCAFLAERAGKGATL 549
             F PC  L + A +G + 
Sbjct: 687 SRFTPCEQLLQMAERGESF 705


>sp|A9KU91|FADB_SHEB9 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
           (strain OS195) GN=fadB PE=3 SV=1
          Length = 716

 Score =  269 bits (687), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 174/539 (32%), Positives = 268/539 (49%), Gaps = 20/539 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           T K  + E+A  +G VDAVVAP  L + A Q   D +  +  W A   +      L +  
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228

Query: 64  EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
            +  F  A+    A    H   P+  + V+E     G    LQ E + F KL +++  K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+ IF   +           G   + V   A+LG G+MG GIA        P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
             L+ G+      L ++V +G+ T EK  K ++ +T  LDY + K  D+V+EA++E+  +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           K Q+ A++E Y     I+ASNTSTI +NL+ +     +R  G HFF+P H MPL+E++R 
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             +S + I  ++    K+ KTPIVV +C GF VNR+ FPY      L+  G D   ID+ 
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526

Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
           + K FG PMGP  L D+VG            E FP+R  KS    I +M E+KR G+   
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586

Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
           KGFY+Y    +  P    DP     ++ A          +       DI+     P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638

Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
             R   EGI    A+ D+  V G+GFPP+RGG+  + D++G     +  ++++ L G +
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLY 697


>sp|A1RDW6|FADB_SHESW Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
           (strain W3-18-1) GN=fadB PE=3 SV=1
          Length = 716

 Score =  269 bits (687), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 174/539 (32%), Positives = 268/539 (49%), Gaps = 20/539 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           T    + E+A  +G VDAVVAP  L + A Q   D +  +  W A   +      L +  
Sbjct: 169 TGNDQRAEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228

Query: 64  EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
            +  F  A+    A    H   P+  + V+E     G    LQ E + F KL +++  K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+ IF   +           G   + VK  A+LG G+MG GIA        P+++K++ +
Sbjct: 289 LIGIFLNDQLVKGK--AKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
             L+ G+      L ++V +G+ T EK  K ++ +T  LDY + K  D+V+EA++E+  +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKI 406

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           K Q+ A++E Y     I+ASNTSTI +NL+ +     +R  G HFF+P H MPL+E++R 
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             +S + I  ++    K+ KTPIVV +C GF VNR+ FPY      L+  G D   ID+ 
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526

Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
           + K FG PMGP  L D+VG            E FP+R  KS    I +M E+KR G+   
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586

Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
           KGFY+Y    +  P    DP     ++ A          +       DI+     P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKTFEADDIIARTMIPMIIE 638

Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
             R   EGI    A+ D+  V G+GFPP+RGG+  + D++G     +  ++++ L G +
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLY 697


>sp|A4Y1B6|FADB_SHEPC Fatty acid oxidation complex subunit alpha OS=Shewanella
           putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadB PE=3
           SV=1
          Length = 716

 Score =  269 bits (687), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 174/539 (32%), Positives = 268/539 (49%), Gaps = 20/539 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           T    + E+A  +G VDAVVAP  L + A Q   D +  +  W A   +      L +  
Sbjct: 169 TGNDQRAEDALKVGAVDAVVAPEALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228

Query: 64  EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
            +  F  A+    A    H   P+  + V+E     G    LQ E + F KL +++  K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+ IF   +           G   + VK  A+LG G+MG GIA        P+++K++ +
Sbjct: 289 LIGIFLNDQLVKGK--AKKAGKLAKEVKNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
             L+ G+      L ++V +G+ T EK  K ++ +T  LDY + K  D+V+EA++E+  +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAALKHSDVVVEAVVEHPKI 406

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           K Q+ A++E Y     I+ASNTSTI +NL+ +     +R  G HFF+P H MPL+E++R 
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             +S + I  ++    K+ KTPIVV +C GF VNR+ FPY      L+  G D   ID+ 
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526

Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
           + K FG PMGP  L D+VG            E FP+R  KS    I +M E+KR G+   
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586

Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
           KGFY+Y    +  P    DP     ++ A          +       DI+     P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKTFEADDIIARTMIPMIIE 638

Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
             R   EGI    A+ D+  V G+GFPP+RGG+  + D++G     +  ++++ L G +
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLY 697


>sp|B8E3R3|FADB_SHEB2 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
           (strain OS223) GN=fadB PE=3 SV=1
          Length = 716

 Score =  269 bits (687), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 174/539 (32%), Positives = 268/539 (49%), Gaps = 20/539 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           T K  + E+A  +G VDAVVAP  L + A Q   D +  +  W A   +      L +  
Sbjct: 169 TGKDQRAEDALKVGAVDAVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228

Query: 64  EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
            +  F  A+    A    H   P+  + V+E     G    LQ E + F KL +++  K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+ IF   +           G   + V   A+LG G+MG GIA        P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
             L+ G+      L ++V +G+ T EK  K ++ +T  LDY + K  D+V+EA++E+  +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           K Q+ A++E Y     I+ASNTSTI +NL+ +     +R  G HFF+P H MPL+E++R 
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             +S + I  ++    K+ KTPIVV +C GF VNR+ FPY      L+  G D   ID+ 
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526

Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
           + K FG PMGP  L D+VG            E FP+R  KS    I +M E+KR G+   
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586

Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
           KGFY+Y    +  P    DP     ++ A          +       DI+     P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638

Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
             R   EGI    A+ D+  V G+GFPP+RGG+  + D++G     +  ++++ L G +
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLY 697


>sp|A4VKA3|FADB_PSEU5 Fatty acid oxidation complex subunit alpha OS=Pseudomonas stutzeri
           (strain A1501) GN=fadB PE=3 SV=1
          Length = 715

 Score =  269 bits (687), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 175/556 (31%), Positives = 280/556 (50%), Gaps = 28/556 (5%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQL-------VSTARQWALDILEHRRPWVATLYKTDKI 56
           + K  + E+A  +  VDAVVAP +L       V  A    LD    R+P +  L K + I
Sbjct: 170 SGKENRAEDALKVHAVDAVVAPEKLQEAALDLVKRAISGELDYKAKRQPKLDKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    ++ EA  F KL ++ 
Sbjct: 229 EQMMAFETSKAFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFVKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SLV +F + +   K     D     R VK  A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAQSLVGLFLSDQELKKKAKAYDK--QARDVKLAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L  RV+KG++T EK  + ++ +   + Y  F +VD+V+EA++E
Sbjct: 344 DIREEGIQMGLDEASKLLGKRVEKGRLTPEKMAQALNAIRPTMSYGDFGNVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +K  + A++E +     I+ASNTSTI ++ + +     +   G HFF+P H+MPL+E
Sbjct: 404 NPKVKHAVLAEVEGHVREDAIIASNTSTISISYLAQALKRPENFCGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  +TS   I   +   KK+ K+P+VV +C GF VNR+ FPY       +  G D   
Sbjct: 464 VIRGEKTSETAIATTVAYAKKMGKSPVVVNDCPGFLVNRVLFPYFGGFARAIAHGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKS--MIIPIMQEDKRAGE 414
            D+ + KFG PMGP  L D+VG            E FP+R        + +M +  R G+
Sbjct: 524 ADKVMEKFGWPMGPAYLMDVVGMDTGHHGRDVMAEGFPDRMKDDTRTAVDVMYDANRLGQ 583

Query: 415 TTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPV 470
              KGFY Y+  +K  P    DP+  + ++         I  +  +LS++DI+  +  P+
Sbjct: 584 KNGKGFYAYEMDKKGKPKKVVDPQAYELLK--------PIVAETRELSDEDIINYMMIPL 635

Query: 471 VNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYG 530
             E  R   +GI   AA+ D+  + G+GFPP+RGG + + DS+G     +  ++++ L G
Sbjct: 636 CLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVAMADKYADL-G 694

Query: 531 EFFKPCAFLAERAGKG 546
             + P A L E A  G
Sbjct: 695 PLYHPTAKLREMAANG 710


>sp|B1J5A5|FADB_PSEPW Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
           (strain W619) GN=fadB PE=3 SV=1
          Length = 715

 Score =  268 bits (686), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 178/554 (32%), Positives = 280/554 (50%), Gaps = 24/554 (4%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP         LV  A    LD    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLQAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   +     D       VK+ A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAQSLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L +RV+KG++T  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI +NL+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKEDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
              KGFY Y+  ++  P    KK  +      +  +  + +  +++++DI+  +  P+  
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GPL 696

Query: 533 FKPCAFLAERAGKG 546
           + P A L E A  G
Sbjct: 697 YHPTAKLREMAKNG 710


>sp|A5W6H0|FADB_PSEP1 Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
           (strain F1 / ATCC 700007) GN=fadB PE=3 SV=1
          Length = 715

 Score =  268 bits (686), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 177/554 (31%), Positives = 280/554 (50%), Gaps = 24/554 (4%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP         L+  A    LD    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   +     D       VK+ A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L +RV+KG++T  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI +NL+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYESNRLGQ 583

Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
              KGFY Y+  ++  P    KK  +      +  +  + +  +++++DI+  +  P+  
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GPL 696

Query: 533 FKPCAFLAERAGKG 546
           + P A L E A  G
Sbjct: 697 YHPTAKLREMAKNG 710


>sp|A1RI92|FADJ_SHESW Fatty acid oxidation complex subunit alpha OS=Shewanella sp.
           (strain W3-18-1) GN=fadJ PE=3 SV=1
          Length = 706

 Score =  268 bits (686), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 186/548 (33%), Positives = 277/548 (50%), Gaps = 18/548 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E   
Sbjct: 165 MMLTGKQIRSKQALKMGLVNDVVPQTILLQTAVEMALTGKRAPKPVKKSLV-NQVLEGTS 223

Query: 61  EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I F  A  Q  K+   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G  PR+VKK  ILGGGLMG GIA+     +  PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           ++EK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+++EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIIVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ ++ I E     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
           KGFY Y    K     + K   E    + G+    +     L+E+ +V+M+     NEA 
Sbjct: 582 KGFYQYGASSK-----KTKAVDETVYGVLGIKPGTNKDAKALAERCVVQML-----NEAV 631

Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKP 535
           R   +GI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + S +G  F+P
Sbjct: 632 RCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILESYQSQFGNRFEP 691

Query: 536 CAFLAERA 543
           C  L   A
Sbjct: 692 CERLKTMA 699


>sp|A4Y897|FADJ_SHEPC Fatty acid oxidation complex subunit alpha OS=Shewanella
           putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3
           SV=1
          Length = 706

 Score =  268 bits (685), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 188/548 (34%), Positives = 278/548 (50%), Gaps = 18/548 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E   
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPIKKSLV-NQVLEGTS 223

Query: 61  EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I F  A  Q  K+   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G  PR+VKK  ILGGGLMG GIA+     +  PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GATPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           ++EK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAVRDNLMALMTTTTEYKGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ ++ I E     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILDKELGERFKAPAAFDKLLGDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
           KGFY Y    K     + K   E    + G+  + +     L+E+ +V+M+     NEA 
Sbjct: 582 KGFYQYGASSK-----KTKAVDETVYGVLGIKPSTNKDAKALAERCVVQML-----NEAV 631

Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKP 535
           R   EGI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + S +G  F+P
Sbjct: 632 RCLDEGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILEGYQSQFGNRFEP 691

Query: 536 CAFLAERA 543
           C  L   A
Sbjct: 692 CERLKTMA 699


>sp|A6WHA0|FADB_SHEB8 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
           (strain OS185) GN=fadB PE=3 SV=1
          Length = 716

 Score =  268 bits (685), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 173/539 (32%), Positives = 268/539 (49%), Gaps = 20/539 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLGEAR 63
           T K  + E+A  +G VD+VVAP  L + A Q   D +  +  W A   +      L +  
Sbjct: 169 TGKDQRAEDALKVGAVDSVVAPQALEAAAIQMLKDAVAEKLDWQARRNRKLSALTLPKLE 228

Query: 64  EIFKFARAQARKQAPNLTH---PIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETCKS 120
            +  F  A+    A    H   P+  + V+E     G    LQ E + F KL +++  K+
Sbjct: 229 AMMSFTTAKGMVFAVAGKHYPAPMAAVSVIEQASTKGRAEALQIEHQAFIKLAKTDVAKA 288

Query: 121 LVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILKEVNE 180
           L+ IF   +           G   + V   A+LG G+MG GIA        P+++K++ +
Sbjct: 289 LIGIFLNDQFVKGK--AKKAGKLAKEVNNAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQ 346

Query: 181 KFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIENVSL 240
             L+ G+      L ++V +G+ T EK  K ++ +T  LDY + K  D+V+EA++E+  +
Sbjct: 347 PALDLGLNEAAKLLSAQVARGRSTPEKMAKVLNNITPSLDYAAIKHSDVVVEAVVEHPKI 406

Query: 241 KQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEIVRT 300
           K Q+ A++E Y     I+ASNTSTI +NL+ +     +R  G HFF+P H MPL+E++R 
Sbjct: 407 KAQVLAEVEGYVSEDAIIASNTSTISINLLAKSMKKPERFCGMHFFNPVHKMPLVEVIRG 466

Query: 301 NQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLIDRA 360
             +S + I  ++    K+ KTPIVV +C GF VNR+ FPY      L+  G D   ID+ 
Sbjct: 467 EHSSEETIASVVAYASKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLAEGGDFAAIDKV 526

Query: 361 ITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMI--IPIMQEDKRAGETTR 417
           + K FG PMGP  L D+VG            E FP+R  KS    I +M E+KR G+   
Sbjct: 527 MEKQFGWPMGPAYLLDVVGLDTGHHAQAVMAEGFPDRMGKSGTDAIDVMFENKRLGQKNG 586

Query: 418 KGFYLYDERRKASP----DPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNE 473
           KGFY+Y    +  P    DP     ++ A          +       DI+     P++ E
Sbjct: 587 KGFYVYSVDSRGKPKKDVDPTSYGLLKDAFG--------ELKAFEADDIIARTMIPMIIE 638

Query: 474 ACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
             R   EGI    A+ D+  V G+GFPP+RGG+  + D++G     +  ++++ L G +
Sbjct: 639 TVRCLEEGIVASPAEADMGLVYGLGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLY 697


>sp|Q88L02|FADB_PSEPK Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
           (strain KT2440) GN=fadB PE=3 SV=1
          Length = 715

 Score =  268 bits (684), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 178/552 (32%), Positives = 278/552 (50%), Gaps = 20/552 (3%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP         L+  A    LD    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   +     D       VK+ A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L +RV+KG++T  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI +NL+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSDVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVNEA 474
              KGFY Y+  ++  P    KK  +         I  +  +++++DI+  +  P+  E 
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQREVTDEDIINWMMVPLCLET 639

Query: 475 CRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFK 534
            R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  + 
Sbjct: 640 VRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GPLYH 698

Query: 535 PCAFLAERAGKG 546
           P A L E A  G
Sbjct: 699 PTAKLREMAKNG 710


>sp|B0KH74|FADB_PSEPG Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida
           (strain GB-1) GN=fadB PE=3 SV=1
          Length = 715

 Score =  268 bits (684), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/554 (31%), Positives = 280/554 (50%), Gaps = 24/554 (4%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP         L+  A    LD    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLLAGALDLIKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   +     D       VK+ A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L +RV+KG++T  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI +NL+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVEGQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
              KGFY Y+  ++  P    KK  +      +  +  + +  +++++DI+  +  P+  
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVFDATVLDVLKPIVFEQR--EVTDEDIINWMMVPLCL 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GPL 696

Query: 533 FKPCAFLAERAGKG 546
           + P A L E A  G
Sbjct: 697 YHPTAKLREMAKNG 710


>sp|Q93Q12|FADB_PSEOL Fatty acid oxidation complex subunit alpha OS=Pseudomonas
           oleovorans GN=fadB PE=3 SV=1
          Length = 715

 Score =  268 bits (684), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 177/554 (31%), Positives = 280/554 (50%), Gaps = 24/554 (4%)

Query: 4   TSKPVKGEEAHSLGLVDAVVAPN-------QLVSTARQWALDILEHRRPWVATLYKTDKI 56
             K  + E+A  +G VDAVVAP         LV  A    LD    R+P +  L K + I
Sbjct: 170 AGKENRAEDALKVGAVDAVVAPELLMAGALDLVKRAISGELDYKAKRQPKLEKL-KLNAI 228

Query: 57  EPLGEAREIFKFARAQARKQAPNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           E +        F   QA    PN   P+  I  ++     G    L+ EA  F KL ++ 
Sbjct: 229 EQMMAFETAKGFVAGQA---GPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTS 285

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVILK 176
             +SL+ +F   +   +     D        K+ A+LG G+MG GIA    +   P+++K
Sbjct: 286 VAESLIGLFLNDQELKRKAKAHDE--IAHDAKQAAVLGAGIMGGGIAYQSAVKGTPILMK 343

Query: 177 EVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIE 236
           ++ E+ ++ G+      L +RV+KG++T  K  + ++ +   L Y  F +VD+V+EA++E
Sbjct: 344 DIREEAIQLGLNEASKLLGNRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVE 403

Query: 237 NVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLE 296
           N  +KQ + A++E       ILASNTSTI +NL+ +     +  VG HFF+P H+MPL+E
Sbjct: 404 NPKVKQAVLAEVETQVKDDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVE 463

Query: 297 IVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYL 356
           ++R  ++S   +   +   KK+ K PIVV +C GF VNR+ FPY      LV  G D   
Sbjct: 464 VIRGEKSSEVAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVR 523

Query: 357 IDRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTY--KSMIIPIMQEDKRAGE 414
           ID+ + KFG PMGP  L D+VG            E FP+R    +   +  + E  R G+
Sbjct: 524 IDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDERRSAVDALYEANRLGQ 583

Query: 415 TTRKGFYLYDERRKASPDPEVKKFIEKA--RSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
              KGFY Y+  ++  P    KK  + +    +  +  + +  +++++DI+  +  P+  
Sbjct: 584 KNGKGFYAYETDKRGKP----KKVADASVLDVLKPIVFEQR--EVTDEDIINWMMIPLCL 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   +GI   AA+ D+  V G+GFPP+RGG + + DS+G     +  ++++ L G  
Sbjct: 638 ETVRCLEDGIVETAAEADMGLVYGIGFPPFRGGALRYIDSIGVAEFVALADQYADL-GPL 696

Query: 533 FKPCAFLAERAGKG 546
           + P A L E A  G
Sbjct: 697 YHPTAKLREMAKNG 710


>sp|B5XVW2|FADJ_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
           (strain 342) GN=fadJ PE=3 SV=1
          Length = 714

 Score =  268 bits (684), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 186/562 (33%), Positives = 293/562 (52%), Gaps = 35/562 (6%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKI--EP 58
           MMLT + ++  +A   GLVD VV    L+  A + AL      RP    +   +++   P
Sbjct: 167 MMLTGRQLRARQALKAGLVDEVVPQAILLQAAVELAL----KGRPASRDMPVRERVLAGP 222

Query: 59  LGEAREIFKFARAQARKQAPNLTHPIV--CIDVVEAGVVSGPRAGLQKEAEDFQKLLRSE 116
           LG    +F F   Q +++     +P V   + VVE G+  G  +G  +EA  F +L  + 
Sbjct: 223 LGR-HLLFHFVGKQTQRKTQG-NYPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTP 280

Query: 117 TCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIA-TALILSNYPVIL 175
             ++L  IFFA     K  G       P  +  +A+LGGGLMG GIA         PV +
Sbjct: 281 QSQALRSIFFASTDLKKDRGAE---AEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRI 337

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++  + +   +      L  +V++ ++   + ++ +++++G  DY+ F   D+VIEA+ 
Sbjct: 338 KDIQPRGINHALKYSWDLLNKQVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVF 397

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           E+++LKQ++ +++E+YC P  I ASNTS++ +  I  +     R++G HFFSP   MPL+
Sbjct: 398 EDLALKQRMVSEVEQYCGPQTIFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLV 457

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           E++    T PQ I  ++ + K+  KTPIVV +  GF VNR+  PY   A  L+  G  + 
Sbjct: 458 EVIPHKGTDPQAIATVVQLAKRQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVE 517

Query: 356 LIDRAITKFGMPMGPFRLADLVGFGVAIATGMQFI----ENFPER-TYKSMIIPIMQEDK 410
            ID+A+ KFG P+GP +L D VG    I TG + I      F ER +  + II  + +D 
Sbjct: 518 EIDKALVKFGFPVGPIQLLDEVG----IDTGTKIIPVLESAFGERFSSPANIIDAILKDD 573

Query: 411 RAGETTRKGFYLYDERRKAS---PDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIF 467
           R G    +GFYLY+ + + S   PDP V   +          ID   ++LS + + E   
Sbjct: 574 RKGRKNNRGFYLYETKGRKSKKRPDPAVYPLL---------GIDRPQSRLSAQQVAERCV 624

Query: 468 FPVVNEACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSS 527
             ++NEA R F E I   A D DI +V G+GFPP+ GG   + D++G+  + + L+  ++
Sbjct: 625 MMMLNEAARCFDEQIIRSARDGDIGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAA 684

Query: 528 LYGEFFKPCAFLAERAGKGATL 549
            YG  F PC  L   A +G T 
Sbjct: 685 QYGPRFTPCDTLLRMAEQGTTF 706


>sp|Q66FR8|FADB_YERPS Fatty acid oxidation complex subunit alpha OS=Yersinia
           pseudotuberculosis serotype I (strain IP32953) GN=fadB
           PE=3 SV=1
          Length = 729

 Score =  267 bits (682), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 277/549 (50%), Gaps = 16/549 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
           ++ T K V   +A  +GLVDAVV P +LV +A       ++ +  W A   +  K+EPL 
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223

Query: 60  ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
               EA   F  A+ +  + A  +   P+  +  +EA    G    L  E   F  L  S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              ++LV IF   +           G+A  ++   A+LG G+MG GIA    L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++NE  L+ G+      L  ++++GK+   K    ++ +   LDY   +   +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +K  + A++E       +LASNTSTI ++ + +     +   G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHQMPLV 461

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           EI+R  +TS + +  ++    ++ KTPIVV +C GF VNR+ FPY     +LV  G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521

Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
            ID+ + K FG PMGP  L D+VG   A          FPER  K     + +M +++R 
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581

Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
           G+   +GFY Y +  K  P  E  + ++K  +     I     + S++DI+     P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   EGI   AA+ D+A V G+GFPP+ GG+  + D+LGS       + ++ L   +
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALY 697

Query: 533 FKPCAFLAE 541
             P    A+
Sbjct: 698 HVPAGLRAK 706


>sp|B2K0Z6|FADB_YERPB Fatty acid oxidation complex subunit alpha OS=Yersinia
           pseudotuberculosis serotype IB (strain PB1/+) GN=fadB
           PE=3 SV=1
          Length = 729

 Score =  267 bits (682), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 277/549 (50%), Gaps = 16/549 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
           ++ T K V   +A  +GLVDAVV P +LV +A       ++ +  W A   +  K+EPL 
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223

Query: 60  ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
               EA   F  A+ +  + A  +   P+  +  +EA    G    L  E   F  L  S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              ++LV IF   +           G+A  ++   A+LG G+MG GIA    L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++NE  L+ G+      L  ++++GK+   K    ++ +   LDY   +   +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +K  + A++E       +LASNTSTI ++ + +     +   G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHQMPLV 461

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           EI+R  +TS + +  ++    ++ KTPIVV +C GF VNR+ FPY     +LV  G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521

Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
            ID+ + K FG PMGP  L D+VG   A          FPER  K     + +M +++R 
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581

Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
           G+   +GFY Y +  K  P  E  + ++K  +     I     + S++DI+     P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   EGI   AA+ D+A V G+GFPP+ GG+  + D+LGS       + ++ L   +
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALY 697

Query: 533 FKPCAFLAE 541
             P    A+
Sbjct: 698 HVPAGLRAK 706


>sp|A3D684|FADJ_SHEB5 Fatty acid oxidation complex subunit alpha OS=Shewanella baltica
           (strain OS155 / ATCC BAA-1091) GN=fadJ PE=3 SV=1
          Length = 706

 Score =  266 bits (681), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 188/552 (34%), Positives = 279/552 (50%), Gaps = 18/552 (3%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPLG 60
           MMLT K ++ ++A  +GLV+ VV    L+ TA + AL      +P   +L     +E   
Sbjct: 165 MMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSLV-NQVLEGTS 223

Query: 61  EAREI-FKFARAQARKQAP-NLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRSETC 118
             R I F  A  Q  K+   N   P   ID V  G+  G + GL+ EA  F +L+ S+  
Sbjct: 224 FGRNIIFDQATKQVEKKTQGNYPAPAKIIDCVRQGITKGMQKGLEVEASHFAELVVSKES 283

Query: 119 KSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALIL-SNYPVILKE 177
           ++L  IFFA     K  G    G +PR+VKK  ILGGGLMG GIA+     +  PV +K+
Sbjct: 284 EALRSIFFATTEMKKETGAE--GASPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKD 341

Query: 178 VNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAIIEN 237
           ++EK L   +      L   VK+  MT    +  ++L+T   +Y+  KD D+V+EA+ E+
Sbjct: 342 ISEKGLSNALAYAYKLLDKGVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFED 401

Query: 238 VSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLLEI 297
           ++LK Q+  D+E+ C  H I ASNTS++ ++ I E     + ++G H+FSP   MPL+E+
Sbjct: 402 LALKHQMVKDIERECGEHTIFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEV 461

Query: 298 VRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLYLI 357
           +   +TSP+ I   +   +K  KTPIVV +  GF VNR+   Y   A  L+  G  +  +
Sbjct: 462 IAHAKTSPETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHL 521

Query: 358 DRAITKFGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSMIIPIMQEDKRAGETTR 417
           D+A+ KFG P+GP  L D VG  V         +   ER         +  D R G    
Sbjct: 522 DKALVKFGFPVGPITLLDEVGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNG 581

Query: 418 KGFYLYDERRKASPDPEVKKFIEKARSMSGV--AIDPKFAKLSEKDIVEMIFFPVVNEAC 475
           KGFY Y    K     + K   E    + G+    +     L+E+ +V+M+     NEA 
Sbjct: 582 KGFYQYGASSK-----KAKAVDESVYGVLGIKPGTNKDAKALAERCVVQML-----NEAV 631

Query: 476 RVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKP 535
           R   +GI     D DI ++ G+GFPP+ GG   + D+LG+  +   LE + S  G  F+P
Sbjct: 632 RCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVRILEGYQSQLGSRFEP 691

Query: 536 CAFLAERAGKGA 547
           C  L   A + A
Sbjct: 692 CERLKTMAQENA 703


>sp|A7FDF2|FADB_YERP3 Fatty acid oxidation complex subunit alpha OS=Yersinia
           pseudotuberculosis serotype O:1b (strain IP 31758)
           GN=fadB PE=3 SV=1
          Length = 729

 Score =  266 bits (681), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 277/549 (50%), Gaps = 16/549 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
           ++ T K V   +A  +GLVDAVV P +LV +A       ++ +  W A   +  K+EPL 
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223

Query: 60  ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
               EA   F  A+ +  + A  +   P+  +  +EA    G    L  E   F  L  S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              ++LV IF   +           G+A  ++   A+LG G+MG GIA    L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++NE  L+ G+      L  ++++GK+   K    ++ +   LDY   +   +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +K  + A++E       +LASNTSTI ++ + +     +   G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           EI+R  +TS + +  ++    ++ KTPIVV +C GF VNR+ FPY     +LV  G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521

Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
            ID+ + K FG PMGP  L D+VG   A          FPER  K     + +M +++R 
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581

Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
           G+   +GFY Y +  K  P  E  + ++K  +     I     + S++DI+     P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   EGI   AA+ D+A V G+GFPP+ GG+  + D+LGS       + ++ L   +
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALY 697

Query: 533 FKPCAFLAE 541
             P    A+
Sbjct: 698 HVPAGLRAK 706


>sp|B1JP63|FADB_YERPY Fatty acid oxidation complex subunit alpha OS=Yersinia
           pseudotuberculosis serotype O:3 (strain YPIII) GN=fadB
           PE=3 SV=1
          Length = 729

 Score =  266 bits (681), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 277/549 (50%), Gaps = 16/549 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
           ++ T K V   +A  +GLVDAVV P +LV +A       ++ +  W A   +  K+EPL 
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223

Query: 60  ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
               EA   F  A+ +  + A  +   P+  +  +EA    G    L  E   F  L  S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              ++LV IF   +           G+A  ++   A+LG G+MG GIA    L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++NE  L+ G+      L  ++++GK+   K    ++ +   LDY   +   +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +K  + A++E       +LASNTSTI ++ + +     +   G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           EI+R  +TS + +  ++    ++ KTPIVV +C GF VNR+ FPY     +LV  G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521

Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
            ID+ + K FG PMGP  L D+VG   A          FPER  K     + +M +++R 
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581

Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
           G+   +GFY Y +  K  P  E  + ++K  +     I     + S++DI+     P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   EGI   AA+ D+A V G+GFPP+ GG+  + D+LGS       + ++ L   +
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALY 697

Query: 533 FKPCAFLAE 541
             P    A+
Sbjct: 698 HVPAGLRAK 706


>sp|A4TR27|FADB_YERPP Fatty acid oxidation complex subunit alpha OS=Yersinia pestis
           (strain Pestoides F) GN=fadB PE=3 SV=1
          Length = 729

 Score =  266 bits (681), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 277/549 (50%), Gaps = 16/549 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
           ++ T K V   +A  +GLVDAVV P +LV +A       ++ +  W A   +  K+EPL 
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223

Query: 60  ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
               EA   F  A+ +  + A  +   P+  +  +EA    G    L  E   F  L  S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              ++LV IF   +           G+A  ++   A+LG G+MG GIA    L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++NE  L+ G+      L  ++++GK+   K    ++ +   LDY   +   +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +K  + A++E       +LASNTSTI ++ + +     +   G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           EI+R  +TS + +  ++    ++ KTPIVV +C GF VNR+ FPY     +LV  G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521

Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
            ID+ + K FG PMGP  L D+VG   A          FPER  K     + +M +++R 
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581

Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
           G+   +GFY Y +  K  P  E  + ++K  +     I     + S++DI+     P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   EGI   AA+ D+A V G+GFPP+ GG+  + D+LGS       + ++ L   +
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALY 697

Query: 533 FKPCAFLAE 541
             P    A+
Sbjct: 698 HVPAGLRAK 706


>sp|Q1CN99|FADB_YERPN Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv.
           Antiqua (strain Nepal516) GN=fadB PE=3 SV=1
          Length = 729

 Score =  266 bits (681), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/549 (31%), Positives = 277/549 (50%), Gaps = 16/549 (2%)

Query: 1   MMLTSKPVKGEEAHSLGLVDAVVAPNQLVSTARQWALDILEHRRPWVATLYKTDKIEPL- 59
           ++ T K V   +A  +GLVDAVV P +LV +A       ++ +  W A   +  K+EPL 
Sbjct: 166 IIATGKDVTANDALKIGLVDAVVDPEKLVGSALTMLKQAIDGKLDWQAA--RRPKLEPLK 223

Query: 60  ---GEAREIFKFARAQARKQA-PNLTHPIVCIDVVEAGVVSGPRAGLQKEAEDFQKLLRS 115
               EA   F  A+ +  + A  +   P+  +  +EA    G    L  E   F  L  S
Sbjct: 224 LNPTEAAMCFTIAKGRVMQVAGKHYPAPLTAVKTIEAAAKFGRTEALNLETNSFVPLAGS 283

Query: 116 ETCKSLVHIFFAQRGTSKVPGVTDLGLAPRRVKKVAILGGGLMGSGIATALILSNYPVIL 175
              ++LV IF   +           G+A  ++   A+LG G+MG GIA    L + PVI+
Sbjct: 284 NEARALVGIFLNDQYVKAQAKKLSKGVAAPKL--AAVLGAGIMGGGIAYQSALKSVPVIM 341

Query: 176 KEVNEKFLEAGIGRVRANLQSRVKKGKMTQEKFEKTISLLTGVLDYESFKDVDMVIEAII 235
           K++NE  L+ G+      L  ++++GK+   K    ++ +   LDY   +   +++EA++
Sbjct: 342 KDINENSLDLGMNEAAKLLNKQLERGKVDGLKMASILATIRPTLDYAGIERAQVIVEAVV 401

Query: 236 ENVSLKQQIFADLEKYCPPHCILASNTSTIDLNLIGERTYSKDRIVGAHFFSPAHVMPLL 295
           EN  +K  + A++E       +LASNTSTI ++ + +     +   G HFF+P H MPL+
Sbjct: 402 ENPKVKAAVLAEVEALIGEDTVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLV 461

Query: 296 EIVRTNQTSPQVIVDLLDIGKKIKKTPIVVGNCTGFAVNRMFFPYTQAAFLLVERGTDLY 355
           EI+R  +TS + +  ++    ++ KTPIVV +C GF VNR+ FPY     +LV  G D +
Sbjct: 462 EIIRGAKTSDKTLAAVVAYATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGGDFH 521

Query: 356 LIDRAITK-FGMPMGPFRLADLVGFGVAIATGMQFIENFPERTYKSM--IIPIMQEDKRA 412
            ID+ + K FG PMGP  L D+VG   A          FPER  K     + +M +++R 
Sbjct: 522 QIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPERMNKDYRDAVDVMFDNQRF 581

Query: 413 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAIDPKFAKLSEKDIVEMIFFPVVN 472
           G+   +GFY Y +  K  P  E  + ++K  +     I     + S++DI+     P++N
Sbjct: 582 GQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMIN 637

Query: 473 EACRVFAEGIAVKAADLDIASVMGMGFPPYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF 532
           E  R   EGI   AA+ D+A V G+GFPP+ GG+  + D+LGS       + ++ L   +
Sbjct: 638 EVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALY 697

Query: 533 FKPCAFLAE 541
             P    A+
Sbjct: 698 HVPAGLRAK 706


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.137    0.399 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 202,304,584
Number of Sequences: 539616
Number of extensions: 8611613
Number of successful extensions: 24390
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 275
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 23144
Number of HSP's gapped (non-prelim): 330
length of query: 560
length of database: 191,569,459
effective HSP length: 123
effective length of query: 437
effective length of database: 125,196,691
effective search space: 54710953967
effective search space used: 54710953967
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)