BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008607
(560 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 314 bits (805), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 169/356 (47%), Positives = 223/356 (62%), Gaps = 9/356 (2%)
Query: 7 KKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA 66
K S DV F G Y+I E IG G+YGVV SA TG++VAIKKI + F+ V++A
Sbjct: 42 KARSFDVTFDV----GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA 97
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPS-RREFKDIYVVFELMESDLHQVIKANDDLTP 125
H +I+ IK IL P EFK +YVV +LMESDLHQ+I ++ LT
Sbjct: 98 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 126 EHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR-VAFNDTPTAI 184
EH ++FLYQLLRGLKY+H+A V HRDLKP N+L N +C+LKI DFG+AR + +
Sbjct: 158 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
F T+YVATRWYRAPEL S +YT AID+WS+GCIF E+L + LFPGKN VHQL ++
Sbjct: 218 FMTEYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
+LGTPSP I V E+ R Y+ S+ ++P+P+ +P A+ AL LL RML FEP R
Sbjct: 277 MVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSAR 336
Query: 305 PTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYH 360
+A AL P+ + EP P +F F+R +T+E ++E I EI ++H
Sbjct: 337 ISAAAALRHPFLAKYHDPDDEPDCAP--PFDFAFDREALTRERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 169/356 (47%), Positives = 223/356 (62%), Gaps = 9/356 (2%)
Query: 7 KKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA 66
K S DV F G Y+I E IG G+YGVV SA TG++VAIKKI + F+ V++A
Sbjct: 43 KARSFDVTFDV----GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNA 98
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTP 125
H +I+ IK IL P EFK +YVV +LMESDLHQ+I ++ LT
Sbjct: 99 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 126 EHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR-VAFNDTPTAI 184
EH ++FLYQLLRGLKY+H+A V HRDLKP N+L N +C+LKI DFG+AR + +
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
F T+YVATRWYRAPEL S +YT AID+WS+GCIF E+L + LFPGKN VHQL ++
Sbjct: 219 FMTEYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 277
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
+LGTPSP I V E+ R Y+ S+ ++P+P+ +P A+ AL LL RML FEP R
Sbjct: 278 MVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSAR 337
Query: 305 PTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYH 360
+A AL P+ + EP P +F F+R +T+E ++E I EI ++H
Sbjct: 338 ISAAAALRHPFLAKYHDPDDEPDCAP--PFDFAFDREALTRERIKEAIVAEIEDFH 391
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 221/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 80
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 139
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 200 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 24 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 82
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 141
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 202 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 319
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 320 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 159/343 (46%), Positives = 221/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 20 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 78
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 137
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 198 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 255
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 256 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 316 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 30 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 88
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 89 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 148 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 208 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 266
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 267 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 325
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 326 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 298 bits (763), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 80
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 139
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 200 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 258
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 259 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 317
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 27 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 85
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 144
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 205 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 322
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 323 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 28 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 86
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 87 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 145
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 206 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 264
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 265 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 323
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 324 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 19 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 77
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 78 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 136
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 197 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 255
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 256 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 314
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 315 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 84
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 143
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 204 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 321
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 322 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 159/342 (46%), Positives = 221/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 24 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLAFRH 82
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 141
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 202 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 260
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY LA+
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY---LAQ 317
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 Y-YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 298 bits (763), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 42 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 100
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 159
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 220 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 337
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 338 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 298 bits (762), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 157/342 (45%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 84
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQILRGLKY 143
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 204 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 321
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 322 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 297 bits (760), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 221/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAI+KI+ FEH + H
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISP-FEHQTYCQRTLREIKILLRFRH 84
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 143
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 204 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 322 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 20 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 78
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 79 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 137
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+P E + + N
Sbjct: 198 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIIN 255
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 256 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 316 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 294 bits (753), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 80
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 139
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 200 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 156/342 (45%), Positives = 218/342 (63%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 84
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 143
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 204 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 321
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 322 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 80
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 139
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 200 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 257
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 293 bits (751), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 220/343 (64%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYXQRTLREIKILLRFRH 84
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 143
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 204 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIIN 261
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 322 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 84
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 143
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F + VATRWYRAPE+
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 204 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 262
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 321
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 322 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 217/342 (63%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 27 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 85
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 86 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 144
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLARVA D F + VATRWYRAPE+
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 205 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 263
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 264 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 322
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 323 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 291 bits (746), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/342 (46%), Positives = 219/342 (64%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 24 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLAFRH 82
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 83 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 141
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + N
Sbjct: 202 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINL 260
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY LA+
Sbjct: 261 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY---LAQ 317
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 Y-YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 290 bits (742), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 157/343 (45%), Positives = 219/343 (63%), Gaps = 11/343 (3%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 22 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 80
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 81 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKY 139
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKI DFGLARVA D F T+YVATRWYRAPE+
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 202 GSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ SK YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 200 LN--SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIIN 257
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
Query: 321 KVEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 318 ----DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 155/342 (45%), Positives = 216/342 (63%), Gaps = 9/342 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY IG+G+YG+VCSAYD +VAIKKI+ FEH + H
Sbjct: 42 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRH 100
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+I+ I I+ P+ + KD+Y+V LM +DL++++K L+ +H +FLYQ+LRGLKY
Sbjct: 101 ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICYFLYQILRGLKY 159
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N LKICDFGLARVA D F T+YVATRWYRAPE+
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 220 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINL 278
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K +P+++ FPNA+ AL LL++ML F P R E+ALA PY +
Sbjct: 279 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY- 337
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHP 361
+PS +P+ + F+F E + KE ++ELI+ E + P
Sbjct: 338 ---DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 286 bits (732), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 220/346 (63%), Gaps = 9/346 (2%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
G RY + IG+G+YG+V SAYD +VAIKKI+ FEH + H
Sbjct: 42 GPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISP-FEHQTYCQRTLREIQILLRFRH 100
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+++ I+ IL + +D+Y+V +LME+DL++++K+ L+ +H +FLYQ+LRGLKY
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKY 159
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
IH+ANV HRDLKP N+L N C LKICDFGLAR+A + F T+ VATRWYRAPE+
Sbjct: 160 IHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIM 219
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ YT +IDIWS+GCI AE+L+ +P+FPGK+ + QL+ + +LG+PS E + + N
Sbjct: 220 LNS-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINM 278
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
KAR YL S+ K + +++ FP ++ AL LL+RML F P R T EEALA PY +
Sbjct: 279 KARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYY- 337
Query: 322 VEREPSAQPVTKMEFEF--ERRRITKEDVRELIYREILEYHPQMLK 365
+P+ +PV + F F E + KE ++ELI++E + P +L+
Sbjct: 338 ---DPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLE 380
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 278 bits (710), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR TA T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPTDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 261 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 160
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 214
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 215 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 274 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 334 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 275 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 151
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 205
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 206 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 265 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 324
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 325 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 360
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 152
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 153 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 206
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 207 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 325
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 326 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 164
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 218
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 219 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 338 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 276 bits (706), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 160
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 214
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 215 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 274 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 334 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 140
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 194
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 195 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 254 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 313
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 314 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 349
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 138
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 192
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 193 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 311
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 312 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPFDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPQDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 139
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 193
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 194 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 253 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 312
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 313 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 348
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR TA T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + E R + ++ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SLESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 138
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 192
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 193 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 311
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 312 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPRDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 275 bits (703), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
+ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NAM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI D+GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 275 bits (702), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 164
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ YVATRWYRAPE+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------XGYVATRWYRAPEIML 218
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 219 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 338 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR TA T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR------HTADEMTGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + E R + ++ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQSS---ESRDLLIDEWKSLTYDEVISFVP 357
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR D A F VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF----VATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR D A F VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF----VATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 140/337 (41%), Positives = 205/337 (60%), Gaps = 12/337 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VCS+YD ++G K+A+KK++ F+ + A H +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 170
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 224
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + ++QL + L GTP I+R+ + +
Sbjct: 225 NWM-HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y++S+ + F+ F ANPLA+ LLE+ML + R TA EALA PYF
Sbjct: 284 ARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDP 343
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEY 359
+ EP ++P + FE R++ E+ + L Y E+ +
Sbjct: 344 DDEPESEPYDQ---SFESRQLEIEEWKRLTYEEVCSF 377
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR D A F VATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF----VATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 273 bits (699), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/332 (43%), Positives = 200/332 (60%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSAYD R +KVA+KK++ F+ + A H +++ + +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 91 LLPPSRRE-FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
P + E F ++Y+V LM +DL+ ++K L+ EH QF +YQLLRGLKYIH+A + H
Sbjct: 88 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIH 146
Query: 150 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N DC+L+I DFGLAR A + T YVATRWYRAPE+ ++ Y
Sbjct: 147 RDLKPSNVAVNEDCELRILDFGLARQADEEM------TGYVATRWYRAPEIMLNWM-HYN 199
Query: 210 PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSS 269
+DIWS+GCI AELL GK LFPG + + QL + +++GTPSPE +A++ +E AR Y+ S
Sbjct: 200 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 259
Query: 270 MRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQ 329
+ S F ANPLA+ LL RML + R +A EALA YF E EP A+
Sbjct: 260 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 319
Query: 330 PVTKMEFEFERRRITKEDVRELIYREILEYHP 361
P + E + T E+ +EL Y+E+L + P
Sbjct: 320 PYDE---SVEAKERTLEEWKELTYQEVLSFKP 348
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI FGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DF LAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI D GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ T VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM------TGXVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI D GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ IG G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI D GLAR ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 272 bits (695), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 152
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 206
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 207 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 325
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 326 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGLAR ++ T YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM------TGYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 271 bits (694), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 138/339 (40%), Positives = 204/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LRGLKYI
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N DC+LKI DFGLAR ++ VATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX------VATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + FE R + ++ + L Y E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/339 (40%), Positives = 204/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G G+YG VC+A+DT+TG +VA+KK++ F+ + A H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
++ + + P S EF D+Y+V LM +DL+ ++K+ LT +H QF +YQ+LRGLKYI
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N D +LKI DFGL R ++ T YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM------TGYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ Y +DIWS+GCI AELLTG+ LFPG + + QL ++ L+GTP E + ++ +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322
AR Y+ S+ + + F+ F ANPLA+ LLE+ML + R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ EP A P + E R + ++ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SLESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 269 bits (687), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/333 (42%), Positives = 202/333 (60%), Gaps = 18/333 (5%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSAYD R +KVA+KK++ F+ + A H +++ + +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 91 LLPPSRRE-FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
P + E F ++Y+V LM +DL+ ++K+ L+ EH QF +YQLLRGLKYIH+A + H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 150 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N D +L+I DFGLAR A + T YVATRWYRAPE+ ++ Y
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEM------TGYVATRWYRAPEIMLNWM-HYN 207
Query: 210 PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSS 269
+DIWS+GCI AELL GK LFPG + + QL + +++GTPSPE +A++ +E AR Y+ S
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 270 MRKKKPIP---FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREP 326
+ P+P S F ANPLA+ LL RML + R +A EALA YF E EP
Sbjct: 268 L---PPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
Query: 327 SAQPVTKMEFEFERRRITKEDVRELIYREILEY 359
A+P + E + T E+ +EL Y+E+L +
Sbjct: 325 EAEPYDE---SVEAKERTLEEWKELTYQEVLSF 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 141/330 (42%), Positives = 198/330 (60%), Gaps = 12/330 (3%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSAYD R +KVA+KK++ F+ + A H +++ + +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 91 LLPPSRRE-FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
P + E F ++Y+V LM +DL+ ++K L+ EH QF +YQLLRGLKYIH+A + H
Sbjct: 96 FTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 150 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N D +L+I DFGLAR A + T YVATRWYRAPE+ ++ Y
Sbjct: 155 RDLKPSNVAVNEDSELRILDFGLARQADEEM------TGYVATRWYRAPEIMLNWM-HYN 207
Query: 210 PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSS 269
+DIWS+GCI AELL GK LFPG + + QL + +++GTPSPE +A++ +E AR Y+ S
Sbjct: 208 QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQS 267
Query: 270 MRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQ 329
+ S F ANPLA+ LL RML + R +A EALA YF E EP A+
Sbjct: 268 LPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEPEAE 327
Query: 330 PVTKMEFEFERRRITKEDVRELIYREILEY 359
P + E + T E+ +EL Y+E+L +
Sbjct: 328 PYDE---SVEAKERTLEEWKELTYQEVLSF 354
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 214/349 (61%), Gaps = 13/349 (3%)
Query: 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
Y S ++++ ++G+G+YGVVCSA TGE VAIKKI + F+ A
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
H +I+ I +I P S F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LR
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV-----AFNDTPTA--IFWTDYVA 191
+K +H +NV HRDLKP N+L N++C LK+CDFGLAR+ A N PT T+YVA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251
TRWYRAPE+ + +KY+ A+D+WS GCI AEL +P+FPG++ HQL ++ ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 252 PEAIAR-VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 310
+ R + + +AR Y+ S+ P + FP NP + LL+RML F+P R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRR--ITKEDVRELIYREIL 357
L PY + EP +P+ FEF+ + +T +D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/349 (40%), Positives = 213/349 (61%), Gaps = 13/349 (3%)
Query: 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
Y S ++++ ++G+G+YGVVCSA TGE VAIKKI + F+ A
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
H +I+ I +I P S F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LR
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV-----AFNDTPTA--IFWTDYVA 191
+K +H +NV HRDLKP N+L N++C LK+CDFGLAR+ A N PT T+ VA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251
TRWYRAPE+ + +KY+ A+D+WS GCI AEL +P+FPG++ HQL ++ ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 252 PEAIAR-VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 310
+ R + + +AR Y+ S+ P + FP NP + LL+RML F+P R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRR--ITKEDVRELIYREIL 357
L PY + EP +P+ FEF+ + +T +D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/349 (40%), Positives = 213/349 (61%), Gaps = 13/349 (3%)
Query: 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
Y S ++++ ++G+G+YGVVCSA TGE VAIKKI + F+ A
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
H +I+ I +I P S F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LR
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV-----AFNDTPTA--IFWTDYVA 191
+K +H +NV HRDLKP N+L N++C LK+CDFGLAR+ A N PT ++VA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251
TRWYRAPE+ + +KY+ A+D+WS GCI AEL +P+FPG++ HQL ++ ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 252 PEAIAR-VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 310
+ R + + +AR Y+ S+ P + FP NP + LL+RML F+P R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRR--ITKEDVRELIYREIL 357
L PY + EP +P+ FEF+ + +T +D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIF 352
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 194/332 (58%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSA D R+GEKVAIKK++ F+ A H +++ + +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 91 LLPPSR-REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
P S R F D Y+V M++DL +++ + + E Q+ +YQ+L+GLKYIH+A V H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 150 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N DC+LKI DFGLAR A + T YV TRWYRAPE+ S+ Y
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHADAEM------TGYVVTRWYRAPEVILSWMH-YN 220
Query: 210 PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSS 269
+DIWS+GCI AE+LTGK LF GK+ + QL + + G P E + ++ ++ A+ Y+ S
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
Query: 270 MRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQ 329
+ + F+Q FP A+P A LLE+ML + R TA +AL P+F+ E E AQ
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 340
Query: 330 PVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ E ++T ++ ++ IY+EI+ + P
Sbjct: 341 --QPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 193/332 (58%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG VCSA D R+GEKVAIKK++ F+ A H +++ + +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 91 LLPPSR-REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
P S R F D Y+V M++DL +++ + E Q+ +YQ+L+GLKYIH+A V H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 150 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N DC+LKI DFGLAR A + T YV TRWYRAPE+ S+ Y
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARHADAEM------TGYVVTRWYRAPEVILSWMH-YN 202
Query: 210 PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSS 269
+DIWS+GCI AE+LTGK LF GK+ + QL + + G P E + ++ ++ A+ Y+ S
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
Query: 270 MRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQ 329
+ + F+Q FP A+P A LLE+ML + R TA +AL P+F+ E E AQ
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322
Query: 330 PVTKMEFEFERRRITKEDVRELIYREILEYHP 361
+ E ++T ++ ++ IY+EI+ + P
Sbjct: 323 --QPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/338 (38%), Positives = 200/338 (59%), Gaps = 12/338 (3%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y+ + +G G+YG VCSA D RTG KVAIKK+ F+ A H ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 85 VEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
+ + + P + +F D Y+V M +DL +++K ++ L + QF +YQ+L+GL+YIH
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
A + HRDLKP N+ N DC+LKI DFGLAR A ++ V TRWYRAPE+ +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGX------VVTRWYRAPEVILN 199
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +YT +DIWS+GCI AE++TGK LF G + + QL + + GTP E + R+++++A
Sbjct: 200 WM-RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+ Y+ + + + F+ NA+PLA+ LLE+ML + + R TA EALA PYF+ L E
Sbjct: 259 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTE 318
Query: 324 REPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHP 361
EP Q K + F+ T ++ + + Y+E+L + P
Sbjct: 319 DEPQVQ---KYDDSFDDVDRTLDEWKRVTYKEVLSFKP 353
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/395 (35%), Positives = 198/395 (50%), Gaps = 57/395 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+I +IG GSYG VC AYD VAIKKI +FE + D H
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDH 113
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
+V++ I++P +F ++YVV E+ +SD ++ + LT H + LY LL G+KY+H
Sbjct: 114 VVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH 173
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVA---------------FNDTPTAIF--- 185
+A + HRDLKP N L N DC +K+CDFGLAR +D F
Sbjct: 174 SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 186 ------WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG-----------K 228
T +V TRWYRAPEL YT AID+WSIGCIFAELL
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELI-LLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG 292
Query: 229 PLFPGKNVV--------------------HQLDIMTDLLGTPSPEAIARVRNEKARRYLS 268
PLFPG + QL+++ ++LGTPS E I + E A+RY+
Sbjct: 293 PLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIR 352
Query: 269 SMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSA 328
K++ +++FP ++ A+ LL+RML F P R T E LA P+FK + E E +A
Sbjct: 353 IFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETNA 412
Query: 329 QPVTKMEFEFERRRITKEDVRELIYREILEYHPQM 363
++ F + + + +R +EI YHP++
Sbjct: 413 TEKVRLPFN-DWMNMDEPQLRYAFVKEIQRYHPEI 446
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 234 bits (598), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 208/369 (56%), Gaps = 43/369 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXX-XXXXXXXXXXXHP 82
+Y++ + +GKG+YG+V + D RTGE VA+KKI D F++ +DA H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
+IV + ++L + R D+Y+VF+ ME+DLH VI+AN L P H Q+ +YQL++ +KY+
Sbjct: 70 NIVNLLNVLRADNDR---DVYLVFDYMETDLHAVIRANI-LEPVHKQYVVYQLIKVIKYL 125
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARV------AFNDTPTAI------------ 184
H+ + HRD+KP NIL NA+C +K+ DFGL+R N+ P +I
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIM 243
TDYVATRWYRAPE L GS +KYT ID+WS+GCI E+L GKP+FPG + ++QL+ +
Sbjct: 186 ILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 244 TDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKF----------------PNANP 287
++ PS E + +++ A+ + S+++K I S K + N
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 288 LALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKED 347
AL LL+++L F P R +A +AL P+ EP+ + + + + + +D
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPIN-DNVKHSIDD 362
Query: 348 VRELIYREI 356
R L+Y EI
Sbjct: 363 YRNLVYSEI 371
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 132/387 (34%), Positives = 200/387 (51%), Gaps = 49/387 (12%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y I+ +IG+GSYG V AYD T + VAIKK+N +FE + D I
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT 144
+ + +++P +F ++Y+V E+ +SDL ++ K LT EH + LY LL G +IH
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHE 147
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF------------------- 185
+ + HRDLKP N L N DC +K+CDFGLAR ++ T I
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ 207
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL----------TGK-PLFPGK 234
T +V TRWYRAPEL YT +IDIWS GCIFAELL T + PLFPG
Sbjct: 208 LTSHVVTRWYRAPELI-LLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGS 266
Query: 235 NV-----------VH------QLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIP 277
+ VH QL+I+ +++GTP+ + + + + +Y+ +KPI
Sbjct: 267 SCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPIN 326
Query: 278 FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFE 337
QK+P+ + + LLE ML F P R T ++AL PY K + K + E + + F+
Sbjct: 327 LKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILPFD 386
Query: 338 FERRRITKEDVRELIYREILEYHPQML 364
+ +++ +R + +E+ +HP+++
Sbjct: 387 -DWMVLSETQLRYIFLKEVQSFHPELV 412
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 214/391 (54%), Gaps = 36/391 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 159
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 160 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 214
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 272
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 273 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 332 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 387
Query: 346 EDVRELIYREILEYHPQMLKEFLEGS-EPTG 375
E+ +ELIY+E++ + ++G P+G
Sbjct: 388 EEWKELIYKEVMNSEEKTKNGVVKGQPSPSG 418
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 214/391 (54%), Gaps = 36/391 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 41 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 100
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 159
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 160 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 214
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 272
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 273 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 332 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 387
Query: 346 EDVRELIYREILEYHPQMLKEFLEGS-EPTG 375
E+ +ELIY+E++ + ++G P+G
Sbjct: 388 EEWKELIYKEVMNSEEKTKNGVVKGQPSPSG 418
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 349
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 122
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 123 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 177
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 236 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 294
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 295 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 350
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 351 EEWKELIYKEVM 362
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 4 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 63
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 122
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 123 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 177
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 235
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 236 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 294
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 295 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 350
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 351 EEWKELIYKEVM 362
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 2 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 61
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 120
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 121 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 175
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 233
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 234 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 292
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 293 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 348
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 349 EEWKELIYKEVM 360
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 349
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 206/373 (55%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 206/373 (55%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/372 (35%), Positives = 207/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 349
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 4 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 122
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 123 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 177
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 235
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K F + FP+ N L
Sbjct: 236 NKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 295 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 350
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 351 EEWKELIYKEVMD 363
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 206/372 (55%), Gaps = 35/372 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITK 345
A LL +ML +P R + ++AL PY A+VE A P + + + R T
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTI 349
Query: 346 EDVRELIYREIL 357
E+ +ELIY+E++
Sbjct: 350 EEWKELIYKEVM 361
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 197/350 (56%), Gaps = 29/350 (8%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ + IG G+ G+VC+AYD VAIKK++ F++ + A H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 84 IVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + ++ P + EF+D+Y+V ELM+++L QVI+ +L E + LYQ+L G+K++
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHL 136
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A + HRDLKP NI+ +DC LKI DFGLAR A T+ T YV TR+YRAPE+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYVVTRYYRAPEVIL 192
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
Y +DIWS+GCI E++ K LFPG++ + Q + + + LGTP PE + +++
Sbjct: 193 GM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 249
Query: 263 ARRYLSSMRKKKPIPFSQKFPNA--------NPL----ALRLLERMLAFEPKDRPTAEEA 310
R Y+ + K + F + FP++ N L A LL +ML +P R + ++A
Sbjct: 250 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 311 LADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREIL 357
L PY A+VE A P + + + R T E+ +ELIY+E++
Sbjct: 310 LQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTIEEWKELIYKEVM 355
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 197/350 (56%), Gaps = 29/350 (8%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ + IG G+ G+VC+AYD VAIKK++ F++ + A H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 84 IVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + ++ P + EF+D+Y+V ELM+++L QVI+ +L E + LYQ+L G+K++
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHL 136
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A + HRDLKP NI+ +DC LKI DFGLAR A T+ T YV TR+YRAPE+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYVVTRYYRAPEVIL 192
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
Y +DIWS+GCI E++ K LFPG++ + Q + + + LGTP PE + +++
Sbjct: 193 GM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 249
Query: 263 ARRYLSSMRKKKPIPFSQKFPNA--------NPL----ALRLLERMLAFEPKDRPTAEEA 310
R Y+ + K + F + FP++ N L A LL +ML +P R + ++A
Sbjct: 250 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 309
Query: 311 LADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREIL 357
L PY A+VE A P + + + R T E+ +ELIY+E++
Sbjct: 310 LQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTIEEWKELIYKEVM 355
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 197/350 (56%), Gaps = 29/350 (8%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ + IG G+ G+VC+AYD VAIKK++ F++ + A H +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 84 IVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + ++ P + EF+D+Y+V ELM+++L QVI+ +L E + LYQ+L G+K++
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHL 135
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A + HRDLKP NI+ +DC LKI DFGLAR A T+ T YV TR+YRAPE+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSFMMTPYVVTRYYRAPEVIL 191
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
Y +DIWS+GCI E++ K LFPG++ + Q + + + LGTP PE + +++
Sbjct: 192 GM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 248
Query: 263 ARRYLSSMRKKKPIPFSQKFPNA--------NPL----ALRLLERMLAFEPKDRPTAEEA 310
R Y+ + K + F + FP++ N L A LL +ML +P R + ++A
Sbjct: 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 311 LADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREIL 357
L PY A+VE A P + + + R T E+ +ELIY+E++
Sbjct: 309 LQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTIEEWKELIYKEVM 354
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 206/373 (55%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 8 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 126
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 127 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 181
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +D+WS+GCI E++ K LFPG++ + Q
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQW 239
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K F + FP+ N L
Sbjct: 240 NKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 298
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 299 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 354
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 355 EEWKELIYKEVMD 367
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 205/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 130/371 (35%), Positives = 199/371 (53%), Gaps = 29/371 (7%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E + + RY+ + IG G+ G+VC+A+DT G VA+KK++ F+
Sbjct: 3 KSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI
Sbjct: 63 NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC--- 177
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T T YV TR+YRAPE+ Y +DIWS+GCI EL+ G +F G + + Q
Sbjct: 178 -TNFMMTPYVVTRYYRAPEVILGM--GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPN------------ANPL 288
+ + + LGTPS E +A ++ R Y+ + K I F + FP+
Sbjct: 235 NKVIEQLGTPSAEFMAALQ-PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDV 348
A LL +ML +P R + +EAL PY E A P + + E R E+
Sbjct: 294 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYD-PAEAEAPPPQIYDAQLEEREHAIEEW 352
Query: 349 RELIYREILEY 359
+ELIY+E++++
Sbjct: 353 KELIYKEVMDW 363
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 204/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 5 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 123
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 124 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 178
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ +V TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 236
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K F + FP+ N L
Sbjct: 237 NKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 295
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 296 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 351
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 352 EEWKELIYKEVMD 364
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 131/369 (35%), Positives = 204/369 (55%), Gaps = 35/369 (9%)
Query: 12 DVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD 65
D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F++ +
Sbjct: 1 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH 60
Query: 66 ATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLT 124
A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 61 AKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELD 118
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184
E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A T+
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----GTSF 174
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T YV TR+YRAPE+ Y +D+WS+GCI E++ K LFPG++ + Q + +
Sbjct: 175 MMTPYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 232
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL----ALRL 292
+ LGTP PE + +++ R Y+ + K F + FP+ N L A L
Sbjct: 233 EQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 291
Query: 293 LERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITKEDVR 349
L +ML + R + +EAL PY V +PS A P + + + R T E+ +
Sbjct: 292 LSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWK 347
Query: 350 ELIYREILE 358
ELIY+E+++
Sbjct: 348 ELIYKEVMD 356
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 196/350 (56%), Gaps = 29/350 (8%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ + IG G+ G+VC+AYD VAIKK++ F++ + A H +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 84 IVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + ++ P + EF+D+Y+V ELM+++L QVI+ +L E + LYQ+L G+K++
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERMSYLLYQMLXGIKHL 135
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A + HRDLKP NI+ +D LKI DFGLAR A T+ T YV TR+YRAPE+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA----GTSFMMTPYVVTRYYRAPEVIL 191
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
Y +DIWS+GCI E++ K LFPG++ + Q + + + LGTP PE + +++
Sbjct: 192 GM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ-PT 248
Query: 263 ARRYLSSMRKKKPIPFSQKFPNA--------NPL----ALRLLERMLAFEPKDRPTAEEA 310
R Y+ + K + F + FP++ N L A LL +ML +P R + ++A
Sbjct: 249 VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 308
Query: 311 LADPYFKGL---AKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREIL 357
L PY A+VE A P + + + R T E+ +ELIY+E++
Sbjct: 309 LQHPYINVWYDPAEVE----APPPQIYDKQLDEREHTIEEWKELIYKEVM 354
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T V TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 203/369 (55%), Gaps = 38/369 (10%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDV 348
A LL +ML +P R + ++AL PY V +P+ + R T E+
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAXXXXX------DEREHTIEEW 343
Query: 349 RELIYREIL 357
+ELIY+E++
Sbjct: 344 KELIYKEVM 352
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/390 (32%), Positives = 194/390 (49%), Gaps = 52/390 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y+I+ +IG+GSYG V AYD + VAIKK+N +FE + D I
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT 144
+ + +++P +F ++Y+V E+ +SDL ++ K LT +H + LY LL G K+IH
Sbjct: 90 IRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHE 149
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF------------------- 185
+ + HRDLKP N L N DC +KICDFGLAR +D I
Sbjct: 150 SGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNL 209
Query: 186 ---WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-----------PLF 231
T +V TRWYRAPEL YT +IDIWS GCIFAELL PLF
Sbjct: 210 KKQLTSHVVTRWYRAPELI-LLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLF 268
Query: 232 PGKNV-----------VH------QLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKK 274
PG + VH QL+I+ +++GTP E + + ++ +Y+ +
Sbjct: 269 PGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRD 328
Query: 275 PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKM 334
I S+K+ + + + LLE ML F + R T ++AL+ PY K + K E + +
Sbjct: 329 GIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKIIL 388
Query: 335 EFEFERRRITKEDVRELIYREILEYHPQML 364
F+ + +++ +R + +EI +H ++
Sbjct: 389 PFD-DWMVLSETQLRYIFLKEIQSFHADLI 417
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 204/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+G I E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 188/348 (54%), Gaps = 23/348 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ + IG G+ G+VC+A+DT G VA+KK++ F++ + A H +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 82
Query: 84 IVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + ++ P + EF+D+Y+V ELM+++L QVI +L E + LYQ+L G+K++
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHL 140
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+A + HRDLKP NI+ +DC LKI DFGLAR A T T YV TR+YRAPE+
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA----STNFMMTPYVVTRYYRAPEVIL 196
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
Y +DIWS+GCI EL+ G +F G + + Q + + + LGTPS E +A ++
Sbjct: 197 GM--GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ-PT 253
Query: 263 ARRYLSSMRKKKPIPFSQKFPN------------ANPLALRLLERMLAFEPKDRPTAEEA 310
R Y+ + I F + FP+ A LL +ML +P R + +EA
Sbjct: 254 VRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILE 358
L PY E A P + + E R E+ +ELIY+E+++
Sbjct: 314 LRHPYITVWYD-PAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMD 360
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 204/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ V TR+YRAPE+ Y +D+WS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 199/369 (53%), Gaps = 40/369 (10%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
KS D F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 KSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP PE + +++ R Y+ + K + F + FP++ N L
Sbjct: 235 NKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDV 348
A LL +ML +P R + ++AL PY + R T E+
Sbjct: 294 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYXXXXXX------------DEREHTIEEW 341
Query: 349 RELIYREIL 357
+ELIY+E++
Sbjct: 342 KELIYKEVM 350
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 203/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+V +AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +D LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ T YV TR+YRAPE+ Y +DIWS+G I E++ G LFPG + + Q
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTPSPE + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 205 bits (521), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/373 (34%), Positives = 203/373 (54%), Gaps = 35/373 (9%)
Query: 8 KSSADVDFFT-EYGEGS-----RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
+S D +F++ E G+ + RY+ + IG G+ G+VC+AYD VAIKK++ F+
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLP-PSRREFKDIYVVFELMESDLHQVIKAN 120
+ + A H +I+ + ++ P S EF+D+Y+V ELM+++L QVI+
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM- 121
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
+L E + LYQ+L G+K++H+A + HRDLKP NI+ +DC LKI DFGLAR A
Sbjct: 122 -ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA---- 176
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
T+ V TR+YRAPE+ Y +DIWS+GCI E++ K LFPG++ + Q
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQW 234
Query: 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA--------NPL---- 288
+ + + LGTP P + +++ R Y+ + K F + FP+ N L
Sbjct: 235 NKVIEQLGTPCPAFMKKLQ-PTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293
Query: 289 ALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPS---AQPVTKMEFEFERRRITK 345
A LL +ML + R + +EAL PY V +PS A P + + + R T
Sbjct: 294 ARDLLSKMLVIDASKRISVDEALQHPYI----NVWYDPSEAEAPPPKIPDKQLDEREHTI 349
Query: 346 EDVRELIYREILE 358
E+ +ELIY+E+++
Sbjct: 350 EEWKELIYKEVMD 362
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 169/330 (51%), Gaps = 24/330 (7%)
Query: 5 QRKKSSADVDFFTE-YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV 63
Q K +A D E + S Y ++ I GSYG VC+ D+ G VAIK++ F V
Sbjct: 3 QAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV---FNTV 58
Query: 64 SDATXXXXXXXX------------XXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES 111
SD HP+I+ ++ I + +Y+V ELM +
Sbjct: 59 SDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT 118
Query: 112 DLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170
DL QVI ++P+H Q+F+Y +L GL +H A V HRDL P NIL + + ICDF
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL 230
LAR DT A T YV RWYRAPEL F +T +D+WS GC+ AE+ K L
Sbjct: 179 NLAR---EDTADA-NKTHYVTHRWYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 231 FPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPI-PFSQKFPNANPLA 289
F G +QL+ + +++GTP E + + AR YL + P ++ P A+P+A
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA 293
Query: 290 LRLLERMLAFEPKDRPTAEEALADPYFKGL 319
L L+ +ML F P+ R + E+AL PYF+ L
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/330 (36%), Positives = 169/330 (51%), Gaps = 24/330 (7%)
Query: 5 QRKKSSADVDFFTE-YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV 63
Q K +A D E + S Y ++ I GSYG VC+ D+ G VAIK++ F V
Sbjct: 3 QAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRV---FNTV 58
Query: 64 SDATXXXXXXXX------------XXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES 111
SD HP+I+ ++ I + +Y+V ELM +
Sbjct: 59 SDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT 118
Query: 112 DLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170
DL QVI ++P+H Q+F+Y +L GL +H A V HRDL P NIL + + ICDF
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL 230
LAR DT A T YV RWYRAPEL F +T +D+WS GC+ AE+ K L
Sbjct: 179 NLAR---EDTADA-NKTHYVTHRWYRAPELVMQ-FKGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 231 FPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPI-PFSQKFPNANPLA 289
F G +QL+ + +++GTP E + + AR YL + P ++ P A+P+A
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA 293
Query: 290 LRLLERMLAFEPKDRPTAEEALADPYFKGL 319
L L+ +ML F P+ R + E+AL PYF+ L
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 164/312 (52%), Gaps = 29/312 (9%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
GSRY + +G G G+V SA D ++VAIKKI + H
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDH 67
Query: 82 PDIVEIKHILLPP---------SRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFL 132
+IV++ IL P S E +Y+V E ME+DL V++ L EH + F+
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-LLEEHARLFM 126
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
YQLLRGLKYIH+ANV HRDLKP N+ N D LKI DFGLAR+ ++ +
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251
T+WYR+P L S + YT AID+W+ GCIFAE+LTGK LF G + + Q+ ++
Sbjct: 187 TKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL------- 238
Query: 252 PEAIARVRNEKARRYLSSM-------RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
E+I V E + LS + + P +Q P + A+ LE++L F P DR
Sbjct: 239 -ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297
Query: 305 PTAEEALADPYF 316
TAEEAL+ PY
Sbjct: 298 LTAEEALSHPYM 309
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 167/304 (54%), Gaps = 18/304 (5%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G +Y+ E +G+G+YGVV A D++ G VA+K+I E +
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRG 138
HP+IV + ++ + + +VFE ME DL +V+ N L + +LYQLLRG
Sbjct: 77 HHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
+ + H + HRDLKP+N+L N+D LK+ DFGLAR AF P + T V T WYRAP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFG-IPVRSY-THEVVTLWYRAP 188
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257
+ L GS KY+ ++DIWSIGCIFAE++TGKPLFPG QL + +LGTP+P +
Sbjct: 189 DVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 258 VRNEKA--RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
V+ +R KK P+S P + LL ML F+P R +A +A+ PY
Sbjct: 247 VQELPLWKQRTFQVFEKK---PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 316 FKGL 319
FK L
Sbjct: 304 FKDL 307
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/304 (39%), Positives = 167/304 (54%), Gaps = 18/304 (5%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G +Y+ E +G+G+YGVV A D++ G VA+K+I E +
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRG 138
HP+IV + ++ + + +VFE ME DL +V+ N L + +LYQLLRG
Sbjct: 77 HHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
+ + H + HRDLKP+N+L N+D LK+ DFGLAR AF P + T V T WYRAP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFG-IPVRSY-THEVVTLWYRAP 188
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257
+ L GS KY+ ++DIWSIGCIFAE++TGKPLFPG QL + +LGTP+P +
Sbjct: 189 DVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 258 VRNEK--ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
V+ +R KK P+S P + LL ML F+P R +A +A+ PY
Sbjct: 247 VQELPLWKQRTFQVFEKK---PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY 303
Query: 316 FKGL 319
FK L
Sbjct: 304 FKDL 307
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 231 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLAK 321
+ + K
Sbjct: 289 QDVTK 293
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 22/300 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GSYGVV + TG+ VAIKK + + HP++V + +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHY-QFFLYQLLRGLKYIHTANVFH 149
R + +++VFE + + + PEH + +Q L+ + + H N H
Sbjct: 71 F-----RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIH 125
Query: 150 RDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT 209
RD+KP+NIL +K+CDFG AR+ T + ++ D VATRWYR+PEL ++Y
Sbjct: 126 RDVKPENILITKHSVIKLCDFGFARLL---TGPSDYYDDEVATRWYRSPELLVGD-TQYG 181
Query: 210 PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA---RRY 266
P +D+W+IGC+FAELL+G PL+PGK+ V QL ++ LG P R+++ +Y
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIP------RHQQVFSTNQY 235
Query: 267 LSSMRKKKP---IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
S ++ P P KFPN + AL LL+ L +P +R T E+ L PYF+ + ++E
Sbjct: 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 13 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 72
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 73 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 127
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 128 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 184
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 185 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 240
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 296
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 76 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGXKY 187
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 188 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 243
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 235
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 16 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 75
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 76 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 130
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 131 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 187
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 188 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 243
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 299
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 235
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGXKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 167/307 (54%), Gaps = 17/307 (5%)
Query: 20 GEGSRYKIEEV--IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXX 77
G GS ++V IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQL 135
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QL
Sbjct: 61 ELNHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
L+GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WY
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWY 172
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254
RAPE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 RAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P
Sbjct: 231 WPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 289 FFQDVTK 295
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 232 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLAK 321
+ + K
Sbjct: 290 QDVTK 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 231 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLAK 321
+ + K
Sbjct: 289 QDVTK 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 233 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLAK 321
+ + K
Sbjct: 291 QDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 232 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLAK 321
+ + K
Sbjct: 290 QDVTK 294
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 231 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLAK 321
+ + K
Sbjct: 289 QDVTK 293
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 231 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLAK 321
+ + K
Sbjct: 289 QDVTK 293
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 232 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLAK 321
+ + K
Sbjct: 290 QDVTK 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 166/307 (54%), Gaps = 17/307 (5%)
Query: 20 GEGSRYKIEEV--IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXX 77
G GS ++V IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQL 135
HP+IV++ ++ ++ +Y+VFE + DL + A+ + + +L+QL
Sbjct: 61 ELNHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
L+GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WY
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWY 172
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254
RAPE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 RAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P
Sbjct: 231 WPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 289 FFQDVTK 295
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 64 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 175
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 176 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 234 GVTSMP--DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 317 KGLAK 321
+ + K
Sbjct: 292 QDVTK 296
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/338 (29%), Positives = 171/338 (50%), Gaps = 59/338 (17%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y + + +G GS+G+VC +D +G++ A+KK+ + D H +
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLDHVN 61
Query: 84 IVEI-----------------------------------KHILLPPSRREFKDIYVVFEL 108
I+++ K +++ PS+ ++ + V+ E
Sbjct: 62 IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY--LNVIMEY 119
Query: 109 MESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DC 163
+ LH+V+K+ + ++YQL R + +IH+ + HRD+KP+N+L N+ D
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 164 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL-CGSFFSKYTPAIDIWSIGCIFA 222
LK+CDFG A+ P+ + +R+YRAPEL G+ ++YTP+ID+WSIGC+F
Sbjct: 180 TLKLCDFGSAKKLIPSEPSVA----XICSRFYRAPELMLGA--TEYTPSIDLWSIGCVFG 233
Query: 223 ELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKF 282
EL+ GKPLF G+ + QL + ++GTP+ E + R+ +++ K + +
Sbjct: 234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKD---WRKIL 290
Query: 283 PNANP-LALRLLERMLAFEPKDRPTAEEALADPYFKGL 319
P P LA+ LLE++L +EP R EA+A P+F L
Sbjct: 291 PEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 233 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLAK 321
+ + K
Sbjct: 291 QDVTK 295
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 165/305 (54%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + + A+ + + +L+QLL+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 231 GVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 317 KGLAK 321
+ + K
Sbjct: 289 QDVTK 293
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 168/307 (54%), Gaps = 17/307 (5%)
Query: 20 GEGSRYKIEEV--IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXX 77
G GS ++V IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQL 135
HP+IV++ ++ ++ +Y+VFE ++ DL + + A+ + + +L+QL
Sbjct: 61 ELNHPNIVKLLDVIHTENK-----LYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
L+GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WY
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWY 172
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254
RAPE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 173 RAPEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P
Sbjct: 231 WPGVTS--MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 288
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 289 FFQDVTK 295
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 235
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + A+ + + +L+QLL+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 233 GVTSMP--DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 317 KGLAK 321
+ + K
Sbjct: 291 QDVTK 295
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 162/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 235
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/305 (36%), Positives = 164/305 (53%), Gaps = 15/305 (4%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXX 79
G ++ E IG+G+YGVV A + TGE VA+KKI E +
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLR 137
HP+IV++ ++ ++ +Y+VFE + DL + A+ + + +L+QLL+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL + H+ V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
V + Y S K FS+ P + LL +ML ++P R +A+ ALA P+F
Sbjct: 232 GVTSMP--DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 317 KGLAK 321
+ + K
Sbjct: 290 QDVTK 294
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 15/296 (5%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+YGVV A + GE A+KKI E + H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYI 142
IV++ ++ R + +VFE ++ DL +++ + L + FL QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N + +LKI DFGLAR AF P + T V T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEVVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
GS KY+ IDIWS+GCIFAE++ G PLFPG + QL + +LGTP+ + V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT-- 229
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+ +Y + +P+P+ + + LL +ML +P R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 158/296 (53%), Gaps = 15/296 (5%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+YGVV A + GE A+KKI E + H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYI 142
IV++ ++ R + +VFE ++ DL +++ + L + FL QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N + +LKI DFGLAR AF P + T V T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEVVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
GS KY+ IDIWS+GCIFAE++ G PLFPG + QL + +LGTP+ + V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT-- 229
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+ +Y + +P+P+ + + LL +ML +P R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+ KI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP--D 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+ KI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 68 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP--D 235
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 158/296 (53%), Gaps = 15/296 (5%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+YGVV A + GE A+KKI E + H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYI 142
IV++ ++ R + +VFE ++ DL +++ + L + FL QLL G+ Y
Sbjct: 62 IVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N + +LKI DFGLAR AF P + T + T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEIVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
GS KY+ IDIWS+GCIFAE++ G PLFPG + QL + +LGTP+ + V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNV--T 229
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+ +Y + +P+P+ + + LL +ML +P R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 161/296 (54%), Gaps = 15/296 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 8 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 67
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + A+ + + +L+QLL+GL + H+
Sbjct: 68 DVIHTENK-----LYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + T V T WYRAPE L G +
Sbjct: 123 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILLGCKY 179
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 180 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMP--D 235
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+ + K
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 160/292 (54%), Gaps = 15/292 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IG+G+YGVV A + TGE VA+KKI E + HP+IV++
Sbjct: 9 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLL 68
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ ++ +Y+VFE + DL + + A+ + + +L+QLL+GL + H+
Sbjct: 69 DVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFF 205
V HRDLKP+N+L N + +K+ DFGLAR AF P + + V T WYRAPE L G +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILLGCKY 180
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y+ A+DIWS+GCIFAE++T + LFPG + + QL + LGTP V +
Sbjct: 181 --YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTS--MPD 236
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
Y S K FS+ P + LL +ML ++P R +A+ ALA P+F+
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 158/303 (52%), Gaps = 29/303 (9%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y+ E IG+G+YG V A + T E VA+K++ + + H +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI 142
IV + +L K + +VFE + DL + + N DL PE + FL+QLL+GL +
Sbjct: 63 IVRLHDVL-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ NV HRDLKP+N+L N + +LK+ +FGLAR AF P + + V T WYR P++
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFG-IPVRCYSAE-VVTLWYRPPDVL- 173
Query: 203 SFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
F +K Y+ +ID+WS GCIFAEL G+PLFPG +V QL + LLGTP+ E
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS--- 229
Query: 261 EKARRYLSSMRKKKPIP-------FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313
++ + KP P P N LL+ +L P R +AEEAL
Sbjct: 230 ------MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 314 PYF 316
PYF
Sbjct: 284 PYF 286
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 156/306 (50%), Gaps = 19/306 (6%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA-TXXXXXXXXXXXXXHPDIVEIKH 89
+G+G+Y V T VA+K+I EH A H +IV +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 90 ILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEH-YQFFLYQLLRGLKYIHTANVF 148
I+ K + +VFE ++ DL Q + ++ H + FL+QLLRGL Y H V
Sbjct: 68 II-----HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSK 207
HRDLKP+N+L N +LK+ DFGLAR T T + + V T WYR P+ L GS +
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKT---YDNEVVTLWYRPPDILLGS--TD 177
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI-ARVRNEKARRY 266
Y+ ID+W +GCIF E+ TG+PLFPG V QL + +LGTP+ E + NE+ + Y
Sbjct: 178 YSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTY 237
Query: 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA-KVERE 325
+ K + P + LL ++L FE ++R +AE+A+ P+F L ++ +
Sbjct: 238 --NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHKL 295
Query: 326 PSAQPV 331
P +
Sbjct: 296 PDTTSI 301
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/303 (36%), Positives = 157/303 (51%), Gaps = 29/303 (9%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y+ E IG+G+YG V A + T E VA+K++ + + H +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI 142
IV + +L K + +VFE + DL + + N DL PE + FL+QLL+GL +
Sbjct: 63 IVRLHDVL-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ NV HRDLKP+N+L N + +LK+ DFGLAR AF P + + V T WYR P++
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFG-IPVRCYSAE-VVTLWYRPPDVL- 173
Query: 203 SFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
F +K Y+ +ID+WS GCIFAEL +PLFPG +V QL + LLGTP+ E
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPS--- 229
Query: 261 EKARRYLSSMRKKKPIP-------FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313
++ + KP P P N LL+ +L P R +AEEAL
Sbjct: 230 ------MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 314 PYF 316
PYF
Sbjct: 284 PYF 286
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 156/312 (50%), Gaps = 24/312 (7%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
E R+++E + G+G++G V + TG VAIKK+ +
Sbjct: 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV---IQDPRFRNRELQIMQDLAVLH 77
Query: 81 HPDIVEIKHILLPPSRREFKDIY--VVFELMESDLHQVIKA----NDDLTPEHYQFFLYQ 134
HP+IV+++ R+ +DIY VV E + LH+ + P + FL+Q
Sbjct: 78 HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 135 LLRGLKYIH--TANVFHRDLKPKNILAN-ADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
L+R + +H + NV HRD+KP N+L N AD LK+CDFG A+ P Y+
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA----YIC 193
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251
+R+YRAPEL YT A+DIWS+GCIFAE++ G+P+F G N QL + +LG PS
Sbjct: 194 SRYYRAPELIFGN-QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPS 252
Query: 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNAN----PLALRLLERMLAFEPKDRPTA 307
E + ++ + K IP+S F + + A LL +L + P++R
Sbjct: 253 REVLRKLNPSHTD---VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309
Query: 308 EEALADPYFKGL 319
EAL PYF L
Sbjct: 310 YEALCHPYFDEL 321
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 113
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 114 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 227
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 228 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 285
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 286 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 344 FDEL----RDPNVK 353
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 154
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 155 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 268
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 269 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 326
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 327 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 385 FDEL----RDPNVK 394
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 110 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 223
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 224 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 281
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 282 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 340 FDEL----RDPNVK 349
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 103
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 104 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 217
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 218 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 275
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 276 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 334 FDEL----RDPNVK 343
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 111
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 112 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 225
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 226 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 283
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 284 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 342 FDEL----RDPNVK 351
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 80
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 81 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 195 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 252
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 253 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 310
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 311 FDEL----RDPNVK 320
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 88
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 89 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 202
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 203 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 260
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 261 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 318
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 319 FDEL----RDPNVK 328
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 154/300 (51%), Gaps = 26/300 (8%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
+VIG GS+GVV A + E VAIKK+ + D HP++V++K
Sbjct: 46 KVIGNGSFGVVFQAKLVESDE-VAIKKV------LQDKRFKNRELQIMRIVKHPNVVDLK 98
Query: 89 HILLPPSRREFKD---IYVVFELMESDLHQV----IKANDDLTPEHYQFFLYQLLRGLKY 141
S + KD + +V E + +++ K + + ++YQLLR L Y
Sbjct: 99 AFFY--SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 142 IHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
IH+ + HRD+KP+N+L + LK+ DFG A++ P + +R+YRAPEL
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV----SXICSRYYRAPEL 212
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
+ YT IDIWS GC+ AEL+ G+PLFPG++ + QL + +LGTPS E I +
Sbjct: 213 IFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271
Query: 261 EKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319
+R P PFS+ F P P A+ L+ R+L + P R TA EAL P+F L
Sbjct: 272 NYMEHKFPQIR---PHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 161/306 (52%), Gaps = 25/306 (8%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S++K E +G G+Y V + TG VA+K++ E + +T H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK-HE 63
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND------DLTPEHYQFFLYQLL 136
+IV + ++ ++ + +VFE M++DL + + + L ++F +QLL
Sbjct: 64 NIVRLYDVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
+GL + H + HRDLKP+N+L N +LK+ DFGLAR AF P F ++ V T WYR
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR-AFG-IPVNTFSSE-VVTLWYR 175
Query: 197 APE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
AP+ L GS Y+ +IDIWS GCI AE++TGKPLFPG N QL ++ D++GTP+
Sbjct: 176 APDVLMGS--RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFP--NANPL---ALRLLERMLAFEPKDRPTAEEA 310
V K +Y +++++ P Q PL + L +L P R +A++A
Sbjct: 234 PSV--TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 311 LADPYF 316
L P+F
Sbjct: 292 LHHPWF 297
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--AFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P Y+ +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 110 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 223
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 224 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 281
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 282 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 340 FDEL----RDPNVK 349
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKDIY---VVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD+ +V + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 88 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 201
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 202 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 259
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 260 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 318 FDEL----RDPNVK 327
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 94
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 95 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 208
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 209 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 266
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 267 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 324
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 325 FDEL----RDPNVK 334
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 88 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 201
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 202 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 259
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 260 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 317
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 318 FDEL----RDPNVK 327
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 79
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 80 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 194 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 251
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 252 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 309
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 310 FDEL----RDPNVK 319
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 83
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 84 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 197
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 198 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 255
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 256 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 313
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 314 FDEL----RDPNVK 323
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 161/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D H +I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 76
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + +++V + A L + + ++YQL R
Sbjct: 77 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 191 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 248
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 249 REMNPNYTEF--KFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 306
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 307 FDEL----RDPNVK 316
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 162/314 (51%), Gaps = 29/314 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQGKAFKNRELQIMRKLDHCNI 75
Query: 85 VEIKHILLPPSRREFKD---IYVVFELMESDLHQVIK----ANDDLTPEHYQFFLYQLLR 137
V +++ S E KD + +V + + + +++V + A L + + ++YQL R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 GLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L YIH+ + HRD+KP+N+L + D LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APEL + YT +ID+WS GC+ AELL G+P+FPG + V QL + +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI- 247
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R N + + + K P+++ F P P A+ L R+L + P R T EA A +
Sbjct: 248 REMNPNYTEF--AFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 305
Query: 316 FKGLAKVEREPSAQ 329
F L R+P+ +
Sbjct: 306 FDEL----RDPNVK 315
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 150/300 (50%), Gaps = 22/300 (7%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT-----XXXXXXXXXXX 78
RY+ + +G+G + V A D T + VAIKKI H S+A
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINRTALREIKLLQE 68
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLR 137
HP+I+ + S +I +VF+ ME+DL +IK N LTP H + ++ L+
Sbjct: 69 LSHPNIIGLLDAFGHKS-----NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ 123
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
GL+Y+H + HRDLKP N+L + + LK+ DFGLA+ +F A + V TRWYRA
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK-SFGSPNRA--YXHQVVTRWYRA 180
Query: 198 PELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
PEL F ++ Y +D+W++GCI AELL P PG + + QL + + LGTP+ E
Sbjct: 181 PELL--FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ + S IP F A L L++ + F P R TA +AL YF
Sbjct: 239 DMCSLPDYVTFKSF---PGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 28/310 (9%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKI--NDIFEHVSDATXXXXXXXXXXXX- 79
+Y+ IG+G+YG V A D + G + VA+K++ E + +T
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 80 XHPDIVEIKHIL-LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTP-EHYQFFLYQLL 136
HP++V + + + + RE K + +VFE ++ DL + K + P E + ++QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV-AFNDTPTAIFWTDYVATRWY 195
RGL ++H+ V HRDLKP+NIL + ++K+ DFGLAR+ +F T++ V T WY
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVTLWY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS---- 251
RAPE+ S Y +D+WS+GCIFAE+ KPLF G + V QL + D++G P
Sbjct: 186 RAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311
P +A R + K P + + + L LL + L F P R +A AL
Sbjct: 244 PRDVALPRQ--------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFKGLAK 321
+ PYF+ L +
Sbjct: 296 SHPYFQDLER 305
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 161/310 (51%), Gaps = 28/310 (9%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKI--NDIFEHVSDATXXXXXXXXXXXX- 79
+Y+ IG+G+YG V A D + G + VA+K++ E + +T
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 80 XHPDIVEIKHIL-LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTP-EHYQFFLYQLL 136
HP++V + + + + RE K + +VFE ++ DL + K + P E + ++QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV-AFNDTPTAIFWTDYVATRWY 195
RGL ++H+ V HRDLKP+NIL + ++K+ DFGLAR+ +F T++ V T WY
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVTLWY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS---- 251
RAPE+ S Y +D+WS+GCIFAE+ KPLF G + V QL + D++G P
Sbjct: 186 RAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311
P +A R + K P + + + L LL + L F P R +A AL
Sbjct: 244 PRDVALPRQ--------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFKGLAK 321
+ PYF+ L +
Sbjct: 296 SHPYFQDLER 305
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 11/304 (3%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
E S+Y+ IG+G++G V A +TG+KVA+KK+ E
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIVEIKHIL---LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTPEHYQFFLYQLL 136
H ++V + I P R IY+VF+ E DL ++ T + + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTAIFWTDYVATR 193
GL YIH + HRD+K N+L D LK+ DFGLAR +A N P + + V T
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR--YXNRVVTL 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
WYR PEL Y P ID+W GCI AE+ T P+ G HQL +++ L G+ +PE
Sbjct: 194 WYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 254 AIARVRNEKARRYLSSMR-KKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
V N + L ++ +K+ + K +P AL L++++L +P R +++AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 313 DPYF 316
+F
Sbjct: 313 HDFF 316
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 153/312 (49%), Gaps = 43/312 (13%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+ +G+G+YG V A DT T E VAIK+I E H +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+E+K ++ R ++++FE E+DL + + N D++ + FLYQL+ G+ + H
Sbjct: 95 IIELKSVIHHNHR-----LHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 144 TANVFHRDLKPKNIL-----ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
+ HRDLKP+N+L A+ LKI DFGLAR AF P F T + T WYR P
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFG-IPIRQF-THEIITLWYRPP 206
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS------ 251
E L GS Y+ ++DIWSI CI+AE+L PLFPG + + QL + ++LG P
Sbjct: 207 EILLGS--RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG 264
Query: 252 -------PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
++ + R + +R L ++ + + ML +P R
Sbjct: 265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTA--------------MLEMDPVKR 310
Query: 305 PTAEEALADPYF 316
+A+ AL PYF
Sbjct: 311 ISAKNALEHPYF 322
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 159/306 (51%), Gaps = 28/306 (9%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKI--NDIFEHVSDATXXXXXXXXXXXX- 79
+Y+ IG+G+YG V A D + G + VA+K++ E + +T
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 80 XHPDIVEIKHIL-LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTP-EHYQFFLYQLL 136
HP++V + + + + RE K + +VFE ++ DL + K + P E + ++QLL
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV-AFNDTPTAIFWTDYVATRWY 195
RGL ++H+ V HRDLKP+NIL + ++K+ DFGLAR+ +F T++ V T WY
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-----VVTLWY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS---- 251
RAPE+ S Y +D+WS+GCIFAE+ KPLF G + V QL + D++G P
Sbjct: 186 RAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311
P +A R + K P + + + L LL + L F P R +A AL
Sbjct: 244 PRDVALPRQ--------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFK 317
+ PYF+
Sbjct: 296 SHPYFQ 301
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 11/304 (3%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
E S+Y+ IG+G++G V A +TG+KVA+KK+ E
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIVEIKHIL---LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTPEHYQFFLYQLL 136
H ++V + I P R IY+VF+ E DL ++ T + + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTAIFWTDYVATR 193
GL YIH + HRD+K N+L D LK+ DFGLAR +A N P + + V T
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR--YXNRVVTL 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
WYR PEL Y P ID+W GCI AE+ T P+ G HQL +++ L G+ +PE
Sbjct: 194 WYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 254 AIARVRNEKARRYLSSMR-KKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
V N + L ++ +K+ + K +P AL L++++L +P R +++AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 313 DPYF 316
+F
Sbjct: 313 HDFF 316
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 155/320 (48%), Gaps = 15/320 (4%)
Query: 10 SADVDFFTE---YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA 66
S+ VD TE + +Y+ ++G+GSYG+V + TG VAIKK + +
Sbjct: 9 SSGVDLGTENLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVK 68
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN-DDLTP 125
H ++V + + R Y+VFE ++ + ++ + L
Sbjct: 69 KIAMREIKLLKQLRHENLVNLLEVCKKKKRW-----YLVFEFVDHTILDDLELFPNGLDY 123
Query: 126 EHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185
+ Q +L+Q++ G+ + H+ N+ HRD+KP+NIL + +K+CDFG AR P ++
Sbjct: 124 QVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL--AAPGEVY 181
Query: 186 WTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
D VATRWYRAPE L G KY A+D+W+IGC+ E+ G+PLFPG + + QL +
Sbjct: 182 -DDEVATRWYRAPELLVGDV--KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
LG P + K+ P +++P + + + L ++ L +P R
Sbjct: 239 MCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKR 298
Query: 305 PTAEEALADPYFKGLAKVER 324
P E L +F+ ER
Sbjct: 299 PFCAELLHHDFFQMDGFAER 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 11/304 (3%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
E S+Y+ IG+G++G V A +TG+KVA+KK+ E
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIVEIKHIL---LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTPEHYQFFLYQLL 136
H ++V + I P R IY+VF+ E DL ++ T + + LL
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTAIFWTDYVATR 193
GL YIH + HRD+K N+L D LK+ DFGLAR +A N P + + V T
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR--YXNRVVTL 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
WYR PEL Y P ID+W GCI AE+ T P+ G HQL +++ L G+ +PE
Sbjct: 194 WYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 254 AIARVRNEKARRYLSSMR-KKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
V N + L ++ +K+ + K +P AL L++++L +P R +++AL
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 313 DPYF 316
+F
Sbjct: 313 HDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/304 (32%), Positives = 147/304 (48%), Gaps = 11/304 (3%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
E S+Y+ IG+G++G V A +TG+KVA+KK+ E
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
Query: 81 HPDIVEIKHIL---LPPSRREFKDIYVVFELMESDLHQVI-KANDDLTPEHYQFFLYQLL 136
H ++V + I P R IY+VF+ E DL ++ T + + LL
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTAIFWTDYVATR 193
GL YIH + HRD+K N+L D LK+ DFGLAR +A N P + + V T
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR--YXNRVVTL 192
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
WYR PEL Y P ID+W GCI AE+ T P+ G HQL +++ L G+ +PE
Sbjct: 193 WYRPPELLLGE-RDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 254 AIARVRNEKARRYLSSMR-KKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
V N + L ++ +K+ + K +P AL L++++L +P R +++AL
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311
Query: 313 DPYF 316
+F
Sbjct: 312 HDFF 315
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/300 (33%), Positives = 142/300 (47%), Gaps = 17/300 (5%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK--KINDIFEHVSDATXXXXXXXXXXXX- 79
SRY+ IG G+YG V A D +G VA+K ++ + E + +T
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 80 XHPDIVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLL 136
HP++V + + + RE K + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
RGL ++H + HRDLKP+NIL + +K+ DFGLAR+ A+F V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALF--PVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P +
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R + + P P P +LL ML F P R +A AL Y
Sbjct: 237 R----DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/300 (32%), Positives = 140/300 (46%), Gaps = 17/300 (5%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK--KINDIFEHVSDATXXXXXXXXXXXX- 79
SRY+ IG G+YG V A D +G VA+K ++ + E + +T
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 80 XHPDIVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLL 136
HP++V + + + RE K + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
RGL ++H + HRDLKP+NIL + +K+ DFGLAR+ A V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA----PVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P +
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R + + P P P +LL ML F P R +A AL Y
Sbjct: 237 R----DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 140/300 (46%), Gaps = 17/300 (5%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK--KINDIFEHVSDATXXXXXXXXXXXX- 79
SRY+ IG G+YG V A D +G VA+K ++ + E + +T
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 80 XHPDIVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLL 136
HP++V + + + RE K + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
RGL ++H + HRDLKP+NIL + +K+ DFGLAR+ + V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALDPVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P +
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R + + P P P +LL ML F P R +A AL Y
Sbjct: 237 R----DVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/307 (31%), Positives = 138/307 (44%), Gaps = 28/307 (9%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI---NDIFEHVS---DATXXXXXXXXX 76
SRY+ IG G+YG V A D +G VA+K + N
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 77 XXXXHPDIVEIKHILLPP-SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLY 133
HP++V + + + RE K + +VFE ++ DL + L E + +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
Q LRGL ++H + HRDLKP+NIL + +K+ DFGLAR+ + T V T
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI----YSYQMALTPVVVTL 183
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS-- 251
WYRAPE+ S Y +D+WS+GCIFAE+ KPLF G + QL + DL+G P
Sbjct: 184 WYRAPEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 252 --PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEE 309
P ++ R + + P P P +LL ML F P R +A
Sbjct: 242 DWPRDVSLPRG--------AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR 293
Query: 310 ALADPYF 316
AL Y
Sbjct: 294 ALQHSYL 300
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 159/326 (48%), Gaps = 42/326 (12%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY++ +VIGKGS+G V AYD + + VA+K + + A +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKY 141
+ + H+L + R I + FEL+ +L+++IK N + + F + +L+ L
Sbjct: 158 TMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 142 IHTANVFHRDLKPKNILANADCK--LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+H + H DLKP+NIL + +K+ DFG + T I +R+YRAPE
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI------QSRFYRAPE 269
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP---EAIA 256
+ ++Y ID+WS+GCI AELLTG PL PG++ QL M +LLG PS +A
Sbjct: 270 VI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 257 RVRNEKAR----RYLS---------------SMRKK-KPIPFSQKFPNA-----NPLALR 291
R +N + RY + S R K + P S+++ NA +PL L
Sbjct: 328 RAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387
Query: 292 LLERMLAFEPKDRPTAEEALADPYFK 317
L++ L ++P R T +AL P+ +
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 142/275 (51%), Gaps = 53/275 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIK------AND---DLTPEHYQFF 131
HP+++ ++ + L + R+ ++++F+ E DL +IK AN L +
Sbjct: 77 HPNVISLQKVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSL 133
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFGLARVAFNDTPTAIFWT 187
LYQ+L G+ Y+H V HRDLKP NIL + ++KI D G AR+ FN +
Sbjct: 134 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL-FNSPLKPLADL 192
Query: 188 D-YVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-------NVVH 238
D V T WYRAPEL G+ YT AIDIW+IGCIFAELLT +P+F + N H
Sbjct: 193 DPVVVTFWYRAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYH 250
Query: 239 --QLDIMTDLLGTPS----------PEAIARVRNEKARRY-----LSSMRKKKPIPFSQK 281
QLD + +++G P+ PE +++ + Y + M K K P S+
Sbjct: 251 HDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKA 310
Query: 282 FPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
F LL+++L +P R T+E+A+ DPYF
Sbjct: 311 F--------HLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 159/326 (48%), Gaps = 42/326 (12%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY++ +VIGKGS+G V AYD + + VA+K + + A +
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKY 141
+ + H+L + R I + FEL+ +L+++IK N + + F + +L+ L
Sbjct: 158 TMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 142 IHTANVFHRDLKPKNILANADCK--LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+H + H DLKP+NIL + +K+ DFG + T I +R+YRAPE
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXI------QSRFYRAPE 269
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP---EAIA 256
+ ++Y ID+WS+GCI AELLTG PL PG++ QL M +LLG PS +A
Sbjct: 270 VI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASK 327
Query: 257 RVRNEKAR----RYLS---------------SMRKK-KPIPFSQKFPNA-----NPLALR 291
R +N + RY + S R K + P S+++ NA +PL L
Sbjct: 328 RAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387
Query: 292 LLERMLAFEPKDRPTAEEALADPYFK 317
L++ L ++P R T +AL P+ +
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 156/326 (47%), Gaps = 42/326 (12%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY++ +VIGKG +G V AYD + + VA+K + + A +
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKY 141
+ + H+L + R I + FEL+ +L+++IK N + + F + +L+ L
Sbjct: 158 TMNVIHMLENFTFRN--HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 142 IHTANVFHRDLKPKNILANADCK--LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+H + H DLKP+NIL + +K+ DFG + I +R+YRAPE
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXI------QSRFYRAPE 269
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP---EAIA 256
+ ++Y ID+WS+GCI AELLTG PL PG++ QL M +LLG P +A
Sbjct: 270 VI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASK 327
Query: 257 RVRNEKAR----RYLS---------------SMRKK-KPIPFSQKFPNA-----NPLALR 291
R +N + RY + S R K + P S+++ NA +PL L
Sbjct: 328 RAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLD 387
Query: 292 LLERMLAFEPKDRPTAEEALADPYFK 317
L++ L ++P R T +AL P+ +
Sbjct: 388 FLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K I + V
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVK----ILKPVKKNKIKREIKILE 86
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 149/339 (43%), Gaps = 58/339 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------IFEHVSDATXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAIK I+ A
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 72 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 181
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V + AL L++++L +PK R T EEAL
Sbjct: 242 EVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEALR 274
Query: 313 DPY---------FKGLAKVEREPSAQPVTKMEFEFERRR 342
P+ F+ L E E +A+P + R+R
Sbjct: 275 HPWLQDEDMKRKFQDLLSEENESTAKPQVLAQPSTSRKR 313
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKVA+K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N+L + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 148/339 (43%), Gaps = 58/339 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------IFEHVSDATXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAIK I+ A
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 78 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 187
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 247
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V + AL L++++L +PK R T EEAL
Sbjct: 248 EVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEALR 280
Query: 313 DPY---------FKGLAKVEREPSAQPVTKMEFEFERRR 342
P+ F+ L E E +A P + R+R
Sbjct: 281 HPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKR 319
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 131/313 (41%), Gaps = 43/313 (13%)
Query: 9 SSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATX 68
SS + + + RY I ++GKGS+G V D T ++ A+K IN D +
Sbjct: 8 SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67
Query: 69 XXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEH 127
HP+I+++ IL S Y+V EL +L I +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSS-----SFYIVGELYTGGELFDEIIKRKRFSEHD 122
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAI 184
+ Q+ G+ Y+H N+ HRDLKP+NIL + DC +KI DFGL+ +T
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK- 181
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
D + T +Y APE+ Y D+WS G I LL+G P F GKN + DI+
Sbjct: 182 ---DRIGTAYYIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDIL- 231
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
RV K L R + A L+ +ML F P R
Sbjct: 232 -----------KRVETGKYAFDLPQWR------------TISDDAKDLIRKMLTFHPSLR 268
Query: 305 PTAEEALADPYFK 317
TA + L P+ +
Sbjct: 269 ITATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 128/298 (42%), Gaps = 43/298 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY I ++GKGS+G V D T ++ A+K IN D + HP+
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPN 82
Query: 84 IVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+++ IL S Y+V EL +L I + + Q+ G+ Y+
Sbjct: 83 IMKLFEILEDSS-----SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYM 137
Query: 143 HTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
H N+ HRDLKP+NIL + DC +KI DFGL+ +T D + T +Y APE
Sbjct: 138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK----DRIGTAYYIAPE 193
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259
+ Y D+WS G I LL+G P F GKN + DI+ RV
Sbjct: 194 VLR---GTYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDIL------------KRVE 235
Query: 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
K Y + + + I K L+ +ML F P R TA + L P+ +
Sbjct: 236 TGK---YAFDLPQWRTISDDAK---------DLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 148/339 (43%), Gaps = 58/339 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------IFEHVSDATXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAIK I+ A
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 72 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 181
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V + AL L++++L +PK R T EEAL
Sbjct: 242 EVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEALR 274
Query: 313 DPY---------FKGLAKVEREPSAQPVTKMEFEFERRR 342
P+ F+ L E E +A P + R+R
Sbjct: 275 HPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKR 313
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 131/313 (41%), Gaps = 43/313 (13%)
Query: 9 SSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATX 68
SS + + + RY I ++GKGS+G V D T ++ A+K IN D +
Sbjct: 8 SSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTST 67
Query: 69 XXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEH 127
HP+I+++ IL S Y+V EL +L I +
Sbjct: 68 ILREVELLKKLDHPNIMKLFEILEDSS-----SFYIVGELYTGGELFDEIIKRKRFSEHD 122
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAI 184
+ Q+ G+ Y+H N+ HRDLKP+NIL + DC +KI DFGL+ +T
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK- 181
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
D + T +Y APE+ Y D+WS G I LL+G P F GKN + DI+
Sbjct: 182 ---DRIGTAYYIAPEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN---EYDIL- 231
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
RV K L R + A L+ +ML F P R
Sbjct: 232 -----------KRVETGKYAFDLPQWR------------TISDDAKDLIRKMLTFHPSLR 268
Query: 305 PTAEEALADPYFK 317
TA + L P+ +
Sbjct: 269 ITATQCLEHPWIQ 281
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 148/339 (43%), Gaps = 58/339 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------IFEHVSDATXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAIK I+ A
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 72 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 181
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V + AL L++++L +PK R T EEAL
Sbjct: 242 EVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEALR 274
Query: 313 DPY---------FKGLAKVEREPSAQPVTKMEFEFERRR 342
P+ F+ L E E +A P + R+R
Sbjct: 275 HPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKR 313
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 148/339 (43%), Gaps = 58/339 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------IFEHVSDATXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAIK I+ A
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 71 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 180
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V + AL L++++L +PK R T EEAL
Sbjct: 241 EVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEALR 273
Query: 313 DPY---------FKGLAKVEREPSAQPVTKMEFEFERRR 342
P+ F+ L E E +A P + R+R
Sbjct: 274 HPWLQDEDMKRKFQDLLSEENESTALPQVLAQPSTSRKR 312
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 147/327 (44%), Gaps = 58/327 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA------TXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAI+ I+ + A
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 211 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 320
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 380
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V S+K AL L++++L +PK R T EEAL
Sbjct: 381 EVWAEV--------------------SEK-------ALDLVKKLLVVDPKARFTTEEALR 413
Query: 313 DPY---------FKGLAKVEREPSAQP 330
P+ F+ L E E +A P
Sbjct: 414 HPWLQDEDMKRKFQDLLSEENESTALP 440
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 157/330 (47%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 34 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 89
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 90 KKKIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 144
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 145 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 204
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 205 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 259
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT A R+ + L +KP KF NA+ P A+ L
Sbjct: 260 IAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPW---LKFMNADNQHLVSPEAIDFL 316
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 317 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 346
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 155/321 (48%), Gaps = 24/321 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAKVEREPSA 328
EA+ PYF + K + +P A
Sbjct: 316 REAMEHPYFYPVVKEQSQPCA 336
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 59/341 (17%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+I+ +IGKGS+G V AYD E VAIK I + ++ A
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--- 111
Query: 84 IVEIKHILLPPSRR-EFKD-IYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGL 139
E+K+ ++ R F++ + +VFE++ +L+ +++ + ++ + F Q+ L
Sbjct: 112 -TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 140 KYIHT--ANVFHRDLKPKNILAN--ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++ T ++ H DLKP+NIL +KI DFG + + +R+Y
Sbjct: 171 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------SSCQLGQRIYQXIQSRFY 224
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
R+PE+ Y AID+WS+GCI E+ TG+PLF G N V Q++ + ++LG P +
Sbjct: 225 RSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 256 ARVRNEKARRYLSSM--------------RKKKPIPFSQKFPN----------------- 284
+ KAR++ + R+ KP P ++K N
Sbjct: 283 DQA--PKARKFFEKLPDGTWNLKKTKDGKREYKP-PGTRKLHNILGVETGGPGGRRAGES 339
Query: 285 ----ANPLALR-LLERMLAFEPKDRPTAEEALADPYFKGLA 320
A+ L + L+ RML ++PK R AL +FK A
Sbjct: 340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 139/305 (45%), Gaps = 49/305 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND------IFEHVSDATXXXXXXXXXXX 78
Y + + +G G+ G V A++ +T +KVAI+ I+ A
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP I++IK+ + +D Y+V ELME +L + N L + + YQ+L
Sbjct: 197 LNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
++Y+H + HRDLKP+N+L ++ DC +KI DFG +++ T++ T T
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL---GETSLMRT-LCGTPT 306
Query: 195 YRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIMTDLLGTPSP 252
Y APE+ S + Y A+D WS+G I L+G P F + V D +T P
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E A V S+K AL L++++L +PK R T EEAL
Sbjct: 367 EVWAEV--------------------SEK-------ALDLVKKLLVVDPKARFTTEEALR 399
Query: 313 DPYFK 317
P+ +
Sbjct: 400 HPWLQ 404
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 157/341 (46%), Gaps = 59/341 (17%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+I+ +IGKGS+G V AYD E VAIK I + ++ A
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--- 92
Query: 84 IVEIKHILLPPSRR-EFKD-IYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGL 139
E+K+ ++ R F++ + +VFE++ +L+ +++ + ++ + F Q+ L
Sbjct: 93 -TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 151
Query: 140 KYIHT--ANVFHRDLKPKNILAN--ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++ T ++ H DLKP+NIL +KI DFG + + +R+Y
Sbjct: 152 LFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------SSCQLGQRIYQXIQSRFY 205
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
R+PE+ Y AID+WS+GCI E+ TG+PLF G N V Q++ + ++LG P +
Sbjct: 206 RSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 263
Query: 256 ARVRNEKARRYLSSM--------------RKKKPIPFSQKFPN----------------- 284
+ KAR++ + R+ KP P ++K N
Sbjct: 264 DQA--PKARKFFEKLPDGTWNLKKTKDGKREYKP-PGTRKLHNILGVETGGPGGRRAGES 320
Query: 285 ----ANPLALR-LLERMLAFEPKDRPTAEEALADPYFKGLA 320
A+ L + L+ RML ++PK R AL +FK A
Sbjct: 321 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 361
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 158/344 (45%), Gaps = 65/344 (18%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
RY+I+ +IGKGS+G V AYD E VAIK I + ++ A
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHD--- 111
Query: 84 IVEIKHILLPPSRR-EFKD-IYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGL 139
E+K+ ++ R F++ + +VFE++ +L+ +++ + ++ + F Q+ L
Sbjct: 112 -TEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTAL 170
Query: 140 KYIHT--ANVFHRDLKPKNILANADCK-----LKICDFGLARVAFNDTPTAIFWTDYVAT 192
++ T ++ H DLKP+NIL C +KI DFG + + +
Sbjct: 171 LFLATPELSIIHCDLKPENILL---CNPKRXAIKIVDFG------SSCQLGQRIYQXIQS 221
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G N V Q++ + ++LG P
Sbjct: 222 RFYRSPEVLLGM--PYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPA 279
Query: 253 EAIARVRNEKARRYLSSM--------------RKKKPIPFSQKFPN-------------- 284
+ + KAR++ + R+ KP P ++K N
Sbjct: 280 HILDQA--PKARKFFEKLPDGTWNLKKTKDGKREYKP-PGTRKLHNILGVETGGPGGRRA 336
Query: 285 -------ANPLALR-LLERMLAFEPKDRPTAEEALADPYFKGLA 320
A+ L + L+ RML ++PK R AL +FK A
Sbjct: 337 GESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 125/234 (53%), Gaps = 17/234 (7%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-A 161
+VFE + +D Q+ + LT +F++Y+LL+ L Y H+ + HRD+KP N++ +
Sbjct: 112 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
KL++ D+GLA A + VA+R+++ PEL + Y ++D+WS+GC+
Sbjct: 169 QKKLRLIDWGLAEFYH----PAQEYNVRVASRYFKGPELLVD-YQMYDYSLDMWSLGCML 223
Query: 222 AELLTGK-PLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLS------SMRKKK 274
A ++ + P F G++ QL + +LGT + + + + S ++ +
Sbjct: 224 ASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWE 283
Query: 275 PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSA 328
S+ +P AL LL+++L ++ + R TA+EA+ PYF + K + +PSA
Sbjct: 284 NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVKEQSQPSA 337
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 13 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 68
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 69 KKKIKREIKILQNLMGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 123
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 184 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 295
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 296 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 13 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 68
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 69 KKKIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 123
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 184 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 295
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 296 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 14 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 69
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 70 KKKIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 124
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 125 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 184
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 185 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 240 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 296
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 297 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 326
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 13 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 68
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 69 KKKIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 123
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 184 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 295
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 296 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 156/330 (47%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 13 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 68
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 69 KKKIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 123
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 184 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 295
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 296 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 13 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 68
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 69 KKKIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 123
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 184 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 295
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 296 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 15 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 70
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KKKIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 125
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 126 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 185
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 186 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 240
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 241 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWL---KFMNADNQHLVSPEAIDFL 297
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 298 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 327
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 14 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 69
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 70 KKKIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 124
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 125 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 184
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 185 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 239
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 240 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 296
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 297 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 326
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 155/330 (46%), Gaps = 29/330 (8%)
Query: 6 RKKSSADVDFFT-EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS 64
R K D + T ++GE Y++ +G+G Y V + EK IK + + V
Sbjct: 13 RPKEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVK 68
Query: 65 DATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT 124
P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 69 KKKIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LT 123
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTA 183
++++Y+LL+ L Y H+ + HRD+KP N++ + + KL++ D+GLA
Sbjct: 124 DYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYN 183
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDI 242
+ VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G + QL
Sbjct: 184 V----RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVK 238
Query: 243 MTDLLGTPSPEAIA---RVRNEKARRYLSSMRKKKPIPFSQKFPNAN------PLALRLL 293
+ +LGT R+ + L +KP KF NA+ P A+ L
Sbjct: 239 IAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKP---WLKFMNADNQHLVSPEAIDFL 295
Query: 294 ERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
+++L ++ ++R TA EA+ PYF+ + E
Sbjct: 296 DKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 147/339 (43%), Gaps = 53/339 (15%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
+RY+I + +G+G++G V D + G + VA+K + ++ + +A
Sbjct: 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTT 71
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDL--TPEHYQFFLYQLLRG 138
P+ + + + I +VFEL+ + IK N L +H + YQ+ +
Sbjct: 72 DPNST-FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 139 LKYIHTANVFHRDLKPKNIL---------------------ANADCKLKICDFGLARVAF 177
+ ++H+ + H DLKP+NIL N D +K+ DFG A +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD--IKVVDFGSA--TY 186
Query: 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
+D + V+TR YRAPE+ + ++ D+WSIGCI E G +FP +
Sbjct: 187 DDEHHSTL----VSTRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240
Query: 238 HQLDIMTDLLGTPSPEAIARVRNEK--------------ARRYLSSMRKKKPIP-FSQKF 282
L +M +LG I + R K A RY+S R KP+ F
Sbjct: 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVS--RACKPLKEFMLSQ 298
Query: 283 PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
+ L+++ML ++P R T EAL P+F L K
Sbjct: 299 DVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 36 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 95
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 96 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 145
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 146 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 201
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 202 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 260
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 261 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 320
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 321 REAMEHPYFYTVVK 334
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 30 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 89
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 90 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 139
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 195
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 196 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 254
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 315 REAMEHPYFYTVVK 328
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 30 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 89
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 90 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 139
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 195
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 196 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 254
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 315 REAMEHPYFYTVVK 328
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 29 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 88
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 89 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 138
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 139 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 194
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 195 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 253
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 254 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 313
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 314 REAMEHPYFYTVVK 327
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 151/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E+G Y++ +G+G Y V A + EKV +K + + +
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRG 90
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQL 135
P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 91 G----PNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLRQT---LTDYDIRFYMYEI 140
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
L+ L Y H+ + HRD+KP N++ + + KL++ D+GLA + VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSP- 252
++ PEL + Y ++D+WS+GC+ A ++ K P F G + QL + +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 253 EAIARVRNEKARRY---LSSMRKKKPIPF--SQKFPNANPLALRLLERMLAFEPKDRPTA 307
+ I + E R+ L +K+ F S+ +P AL L+++L ++ + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 119/287 (41%), Gaps = 40/287 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A + TG++VA+KK++ H ++V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD--LRKQQRRELLFNEVVIMRDYHHDNVVDMYSS 110
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +LR L Y+H V HR
Sbjct: 111 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL +D ++K+ DFG + P V T ++ APE+ Y
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR---KXLVGTPYWMAPEVISRL--PYGT 220
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + P +A+ R+R+
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPY---------------FNEPPLQAMRRIRDSLP------- 258
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
P + + + L+ ML EP R TA+E L P+ K
Sbjct: 259 ------PRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLK 299
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 57/341 (16%)
Query: 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
+RY+I + +G+G++G V D + G + VA+K + ++ + +A
Sbjct: 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTT 71
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDL--TPEHYQFFLYQLLRG 138
P+ + + + I +VFEL+ + IK N L +H + YQ+ +
Sbjct: 72 DPNST-FRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 139 LKYIHTANVFHRDLKPKNIL---------------------ANADCKLKICDFGLARVAF 177
+ ++H+ + H DLKP+NIL N D +K+ DFG A +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD--IKVVDFGSA--TY 186
Query: 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
+D + V R YRAPE+ + ++ D+WSIGCI E G +FP +
Sbjct: 187 DDEHHSTL----VXXRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGFTVFPTHDSK 240
Query: 238 HQLDIMTDLLGTPSPEAIARVRNEK--------------ARRYLSSMRKKKPIP---FSQ 280
L +M +LG I + R K A RY+S R KP+ SQ
Sbjct: 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVS--RACKPLKEFMLSQ 298
Query: 281 KFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
+ L+++ML ++P R T EAL P+F L K
Sbjct: 299 DVEHER--LFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 120/227 (52%), Gaps = 17/227 (7%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN-A 161
+VFE + +D Q+ + LT +F++Y+LL+ L Y H+ + HRD+KP N++ +
Sbjct: 117 LVFEYINNTDFKQLYQI---LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
KL++ D+GLA A + VA+R+++ PEL + Y ++D+WS+GC+
Sbjct: 174 QKKLRLIDWGLAEFYH----PAQEYNVRVASRYFKGPELLVD-YQMYDYSLDMWSLGCML 228
Query: 222 AELLTGK-PLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLS------SMRKKK 274
A ++ + P F G++ QL + +LGT + + + + S ++ +
Sbjct: 229 ASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWE 288
Query: 275 PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321
S+ +P AL LL+++L ++ + R TA+EA+ PYF + K
Sbjct: 289 NFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVVK 335
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 123/286 (43%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A + +G +VA+K ++ H ++VE+
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMD--LRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L ++++V+ E ++ I + L E +L+ L Y+H V HR
Sbjct: 111 YLVG-----EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG D P V T ++ APE+ S Y
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPEVISR--SLYAT 220
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + + V +A+ R+R+
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPV---------------QAMKRLRD---------- 255
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
P P + +P+ LERML +P++R TA+E L P+
Sbjct: 256 ---SPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 135/327 (41%), Gaps = 46/327 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y ++E +GKG++ VV TG + A K IN D HP+I
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 90
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V L S +E Y+VF+L+ +L + I A + + + Q+L + Y H
Sbjct: 91 VR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +PE+
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLSPEV 201
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y+ +DIW+ G I LL G P F ++ H+L I PSPE
Sbjct: 202 LKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE----- 253
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L++ ML PK R TA++AL P+
Sbjct: 254 -----------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICN 290
Query: 319 LAKVEREPSAQPVTKMEFEFERRRITK 345
+V Q +F RR K
Sbjct: 291 RERVASAIHRQDTVDCLKKFNARRKLK 317
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT-XXXXXXXXXXXXXHPD 83
Y+I + +G+GS+G V AY T TG+KVA+K IN SD HP
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+++ ++ + +I +V E ++L I D ++ + + F Q++ ++Y H
Sbjct: 76 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCG 202
+ HRDLKP+N+L + +KI DFGL+ + + F + Y APE + G
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISG 186
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV-VHQLDIMTDLLGTPSPEAIARVRNE 261
++ P +D+WS G I +L + F +++ V +I + P
Sbjct: 187 KLYA--GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----------- 233
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
++LS P A L++RML P +R + E + D +FK
Sbjct: 234 ---KFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT-XXXXXXXXXXXXXHPD 83
Y+I + +G+GS+G V AY T TG+KVA+K IN SD HP
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+++ ++ + +I +V E ++L I D ++ + + F Q++ ++Y H
Sbjct: 75 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCG 202
+ HRDLKP+N+L + +KI DFGL+ + + F + Y APE + G
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISG 185
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV-VHQLDIMTDLLGTPSPEAIARVRNE 261
++ P +D+WS G I +L + F +++ V +I + P
Sbjct: 186 KLYA--GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----------- 232
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
++LS P A L++RML P +R + E + D +FK
Sbjct: 233 ---KFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 130/297 (43%), Gaps = 48/297 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT-XXXXXXXXXXXXXHPD 83
Y+I + +G+GS+G V AY T TG+KVA+K IN SD HP
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+++ ++ + +I +V E ++L I D ++ + + F Q++ ++Y H
Sbjct: 66 IIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCG 202
+ HRDLKP+N+L + +KI DFGL+ + + F + Y APE + G
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVISG 176
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
++ P +D+WS G I +L + F +++ P + N
Sbjct: 177 KLYA--GPEVDVWSCGVILYVMLCRRLPFDDESI---------------PVLFKNISNGV 219
Query: 263 AR--RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
++LS P A L++RML P +R + E + D +FK
Sbjct: 220 YTLPKFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 48/299 (16%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT-XXXXXXXXXXXXXH 81
Y+I + +G+GS+G V AY T TG+KVA+K IN SD H
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P I+++ ++ + +I +V E ++L I D ++ + + F Q++ ++Y
Sbjct: 68 PHIIKLYDVI-----KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + +KI DFGL+ + + F + Y APE +
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 178
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
G ++ P +D+WS G I +L + F +++ P + N
Sbjct: 179 SGKLYA--GPEVDVWSCGVILYVMLCRRLPFDDESI---------------PVLFKNISN 221
Query: 261 EKAR--RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
++LS P A L++RML P +R + E + D +FK
Sbjct: 222 GVYTLPKFLS------------------PGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 134/333 (40%), Gaps = 39/333 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGE-KVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
RY+I +G+G++G V D G+ +VA+K I ++ ++ A
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 88
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPE---HYQFFLYQLLRGL 139
+ + +L+ + + FEL+ + + +K N+ P H + YQL L
Sbjct: 89 N--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENN-FQPYPLPHVRHMAYQLCHAL 145
Query: 140 KYIHTANVFHRDLKPKNIL-----------ANADCKLKICDFGLARVAFNDTPTAIF--- 185
+++H + H DLKP+NIL + C+ K RVA D +A F
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA--DFGSATFDHE 203
Query: 186 -WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T VATR YR PE+ + D+WSIGCI E G LF L +M
Sbjct: 204 HHTTIVATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 261
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA-------------LR 291
+LG I R R +K + + N PL
Sbjct: 262 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 321
Query: 292 LLERMLAFEPKDRPTAEEALADPYFKGLAKVER 324
L+ RML F+P R T EAL P+F GL ER
Sbjct: 322 LMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 354
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 134/333 (40%), Gaps = 39/333 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGE-KVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
RY+I +G+G++G V D G+ +VA+K I ++ ++ A
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 111
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPE---HYQFFLYQLLRGL 139
+ + +L+ + + FEL+ + + +K N+ P H + YQL L
Sbjct: 112 N--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENN-FQPYPLPHVRHMAYQLCHAL 168
Query: 140 KYIHTANVFHRDLKPKNIL-----------ANADCKLKICDFGLARVAFNDTPTAIF--- 185
+++H + H DLKP+NIL + C+ K RVA D +A F
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA--DFGSATFDHE 226
Query: 186 -WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T VATR YR PE+ + D+WSIGCI E G LF L +M
Sbjct: 227 HHTTIVATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 284
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA-------------LR 291
+LG I R R +K + + N PL
Sbjct: 285 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 344
Query: 292 LLERMLAFEPKDRPTAEEALADPYFKGLAKVER 324
L+ RML F+P R T EAL P+F GL ER
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 377
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 134/333 (40%), Gaps = 39/333 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGE-KVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
RY+I +G+G++G V D G+ +VA+K I ++ ++ A
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKE 79
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPE---HYQFFLYQLLRGL 139
+ + +L+ + + FEL+ + + +K N+ P H + YQL L
Sbjct: 80 N--KFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENN-FQPYPLPHVRHMAYQLCHAL 136
Query: 140 KYIHTANVFHRDLKPKNIL-----------ANADCKLKICDFGLARVAFNDTPTAIF--- 185
+++H + H DLKP+NIL + C+ K RVA D +A F
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA--DFGSATFDHE 194
Query: 186 -WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T VATR YR PE+ + D+WSIGCI E G LF L +M
Sbjct: 195 HHTTIVATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLA-------------LR 291
+LG I R R +K + + N PL
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 292 LLERMLAFEPKDRPTAEEALADPYFKGLAKVER 324
L+ RML F+P R T EAL P+F GL ER
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 345
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 127/298 (42%), Gaps = 46/298 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y ++E +GKG++ VV TG + A K IN D HP+I
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V L S +E Y+VF+L+ +L + I A + + + Q+L + Y H
Sbjct: 68 VR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +PE+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLSPEV 178
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y+ +DIW+ G I LL G P F ++ H+L I PSPE
Sbjct: 179 LKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE----- 230
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ P A L++ ML PK R TA++AL P+
Sbjct: 231 -----------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 132/310 (42%), Gaps = 49/310 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y ++E +GKG++ VV TG + A K IN D HP+I
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V L S +E Y+VF+L+ +L + I A + + + Q+L + Y H
Sbjct: 67 VR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 121
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +PE+
Sbjct: 122 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y+ +DIW+ G I LL G P F ++ H+L I PSPE
Sbjct: 178 LKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE----- 229
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L++ ML PK R TA++AL P+
Sbjct: 230 -----------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW--- 263
Query: 319 LAKVEREPSA 328
+ ER SA
Sbjct: 264 ICNRERVASA 273
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 132/310 (42%), Gaps = 49/310 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y ++E +GKG++ VV TG + A K IN D HP+I
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNI 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V L S +E Y+VF+L+ +L + I A + + + Q+L + Y H
Sbjct: 68 VR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 122
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ + HR+LKP+N+L + K +K+ DFGLA + ND+ W + T Y +PE+
Sbjct: 123 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLSPEV 178
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y+ +DIW+ G I LL G P F ++ H+L I PSPE
Sbjct: 179 LKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE----- 230
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L++ ML PK R TA++AL P+
Sbjct: 231 -----------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW--- 264
Query: 319 LAKVEREPSA 328
+ ER SA
Sbjct: 265 ICNRERVASA 274
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 58/301 (19%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA-TXXXXXXXXXXXXXHPD 83
Y I E +G+GS+G V A +T +KVA+K I+ SD HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+++ ++ P+ DI +V E +L I +T + + F Q++ ++Y H
Sbjct: 71 IIKLYDVITTPT-----DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC-G 202
+ HRDLKP+N+L + + +KI DFGL+ + + F + Y APE+ G
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVING 181
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPG-------KNVVHQLDIMTDLLGTPSPEAI 255
++ P +D+WS G + +L G+ F K V + +M D L
Sbjct: 182 KLYA--GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFL-------- 231
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
+P A L+ RM+ +P R T +E DP+
Sbjct: 232 ------------------------------SPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
Query: 316 F 316
F
Sbjct: 262 F 262
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 142/339 (41%), Gaps = 50/339 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
RY+I +G+G++G V D R G +VA+K I ++ E +A P
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNV-EKYKEAARLEINVLEKINEKDP 92
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDL-TPEH-YQFFLYQLLRGLK 140
D + + + + + FEL+ +K N+ L P H + +QL + +K
Sbjct: 93 DNKNLC-VQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVK 151
Query: 141 YIHTANVFHRDLKPKNIL-ANADCKL------------------KICDFGLARVAFNDTP 181
++H + H DLKP+NIL N+D +L ++ DFG A
Sbjct: 152 FLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATFDHEHHS 211
Query: 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
T V+TR YRAPE+ ++ D+WSIGCI E G LF + L
Sbjct: 212 TI------VSTRHYRAPEVILEL--GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 242 IMTDLLGTPSPEAIARVRNEK--------------ARRYLSSMRKKKPIPFSQKFPNANP 287
+M +LG I + R +K A RY+ K + + +
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 288 LALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREP 326
L L+E ML +EP R T EAL P+F A++ EP
Sbjct: 324 L-FDLIESMLEYEPAKRLTLGEALQHPFF---ARLRAEP 358
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK++ H ++VE+ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 216
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +L+ L +H V HR
Sbjct: 217 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG + P V T ++ APEL Y P
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 326
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 359
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R P P + +P L+R+L +P R TA E L P+
Sbjct: 360 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK++ H ++VE+ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 139
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +L+ L +H V HR
Sbjct: 140 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG + P V T ++ APEL Y P
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 249
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 282
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R P P + +P L+R+L +P R TA E L P+
Sbjct: 283 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 124/291 (42%), Gaps = 43/291 (14%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G+YG V D T + AIK I S + HP+I+++
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 91 LLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
+R + Y+V E + +L I + Q+L G+ Y+H N+ H
Sbjct: 105 F--EDKRNY---YLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVH 159
Query: 150 RDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
RDLKP+N+L + D +KI DFGL+ V N + + T +Y APE+
Sbjct: 160 RDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM----KERLGTAYYIAPEV---LRK 212
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266
KY D+WSIG I LL G P F G+ TD +
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQ---------TD------------------QEI 245
Query: 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
L + K K S ++ N + A L+++ML F+ + R +A++AL P+ K
Sbjct: 246 LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK++ H ++VE+ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 96
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +L+ L +H V HR
Sbjct: 97 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG + P V T ++ APEL Y P
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 206
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 239
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R P P + +P L+R+L +P R TA E L P+
Sbjct: 240 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 284
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 128/327 (39%), Gaps = 45/327 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ E IGKG++ VV TG + A K IN D H +I
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNI 65
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V L S E Y+VF+L+ +L + I A + + + Q+L + + H
Sbjct: 66 VR-----LHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 120
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
V HRDLKP+N+L + CK +K+ DFGLA D W + T Y +PE+
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y +DIW+ G I LL G P F ++ H+L I PSPE
Sbjct: 178 LRK--EAYGKPVDIWACGVILYILLVGYPPFWDED-QHKLYQQIKAGAYDFPSPE----- 229
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L+ +ML P R TA EAL P+
Sbjct: 230 -----------------------WDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQ 266
Query: 319 LAKVEREPSAQPVTKMEFEFERRRITK 345
+ V Q + +F RR K
Sbjct: 267 RSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK++ H ++VE+ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 94
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +L+ L +H V HR
Sbjct: 95 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG + P V T ++ APEL Y P
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 204
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 237
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R P P + +P L+R+L +P R TA E L P+
Sbjct: 238 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 10 SADVDFFTE---YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA 66
S+ VD TE + +Y + IG+GS+G T G + IK+IN +
Sbjct: 8 SSGVDLGTENLYFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKER 67
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTP 125
HP+IV+ + S E +Y+V + E DL + I A +
Sbjct: 68 EESRREVAVLANMKHPNIVQYRE-----SFEENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 126 EHYQF--FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183
+ Q + Q+ LK++H + HRD+K +NI D +++ DFG+ARV T
Sbjct: 123 QEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL---NSTV 179
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG---KNVVHQL 240
+ T +Y +PE+C + Y DIW++GC+ EL T K F KN+V ++
Sbjct: 180 ELARACIGTPYYLSPEICEN--KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 18 EYGEGSRYKIEEVIGKGSYGVV-----CSAYDTRTGEKVAIKKINDIFEHVSDATXXXXX 72
E + S++++ +V+G+GS+G V S D R + A+K + V D
Sbjct: 19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDAR--QLYAMKVLKKATLKVRDRVRTKME 76
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFF 131
HP IV++ + + +Y++ + + DL + T E +F+
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
L +L L ++H+ + +RDLKP+NIL + + +K+ DFGL++ + + A +
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCG 188
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTP 250
T Y APE+ +T + D WS G + E+LTG F GK+ + I+ LG P
Sbjct: 189 TVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
Query: 251 ---SPEAIARVR 259
SPEA + +R
Sbjct: 247 QFLSPEAQSLLR 258
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK++ H ++VE+ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 89
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +L+ L +H V HR
Sbjct: 90 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG + P V T ++ APEL Y P
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 199
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 232
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R P P + +P L+R+L +P R TA E L P+
Sbjct: 233 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 277
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ G +Y+H V HRDLK N+ N
Sbjct: 90 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
D ++KI DFGLA +V ++ + T Y APE+ ++ +D+WSIGC
Sbjct: 150 EDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 203
Query: 220 IFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS 279
I LL GKP F + YL + + IP
Sbjct: 204 IMYTLLVGKPPFETSCL--------------------------KETYLRIKKNEYSIP-- 235
Query: 280 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ NP+A L+++ML +P RPT E L D +F
Sbjct: 236 ---KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ G +Y+H V HRDLK N+ N
Sbjct: 116 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
D ++KI DFGLA +V ++ + T Y APE+ ++ +D+WSIGC
Sbjct: 176 EDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 229
Query: 220 IFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS 279
I LL GKP F + YL + + IP
Sbjct: 230 IMYTLLVGKPPFETSCL--------------------------KETYLRIKKNEYSIP-- 261
Query: 280 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ NP+A L+++ML +P RPT E L D +F
Sbjct: 262 ---KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 115/286 (40%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+GS G+VC A +G+ VA+KK++ H ++VE+ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMD--LRKQQRRELLFNEVVIMRDYQHENVVEMYNS 85
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L +++VV E +E I + + E +L+ L +H V HR
Sbjct: 86 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL D ++K+ DFG + P V T ++ APEL Y P
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 195
Query: 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 228
Query: 271 RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
R P P + +P L+R+L +P R TA E L P+
Sbjct: 229 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 273
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 99/217 (45%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ G +Y+H V HRDLK N+ N
Sbjct: 114 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
D ++KI DFGLA +V ++ + T Y APE+ ++ +D+WSIGC
Sbjct: 174 EDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 227
Query: 220 IFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS 279
I LL GKP F + YL + + IP
Sbjct: 228 IMYTLLVGKPPFETSCL--------------------------KETYLRIKKNEYSIP-- 259
Query: 280 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ NP+A L+++ML +P RPT E L D +F
Sbjct: 260 ---KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 18 EYGEGSRYKIEEVIGKGSYGVV-----CSAYDTRTGEKVAIKKINDIFEHVSDATXXXXX 72
E + S++++ +V+G+GS+G V S D R + A+K + V D
Sbjct: 20 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDAR--QLYAMKVLKKATLKVRDRVRTKME 77
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFF 131
HP IV++ + + +Y++ + + DL + T E +F+
Sbjct: 78 RDILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 132
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
L +L L ++H+ + +RDLKP+NIL + + +K+ DFGL++ + + A +
Sbjct: 133 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCG 189
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTP 250
T Y APE+ +T + D WS G + E+LTG F GK+ + I+ LG P
Sbjct: 190 TVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
Query: 251 ---SPEAIARVR 259
SPEA + +R
Sbjct: 248 QFLSPEAQSLLR 259
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 119/252 (47%), Gaps = 22/252 (8%)
Query: 18 EYGEGSRYKIEEVIGKGSYGVV-----CSAYDTRTGEKVAIKKINDIFEHVSDATXXXXX 72
E + S++++ +V+G+GS+G V S D R + A+K + V D
Sbjct: 19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDAR--QLYAMKVLKKATLKVRDRVRTKME 76
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFF 131
HP IV++ + + +Y++ + + DL + T E +F+
Sbjct: 77 RDILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFY 131
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
L +L L ++H+ + +RDLKP+NIL + + +K+ DFGL++ + + A +
Sbjct: 132 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCG 188
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTP 250
T Y APE+ +T + D WS G + E+LTG F GK+ + I+ LG P
Sbjct: 189 TVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
Query: 251 ---SPEAIARVR 259
SPEA + +R
Sbjct: 247 QFLSPEAQSLLR 258
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 159/378 (42%), Gaps = 66/378 (17%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXX 78
G RY+ + +G G+YG V D TG + AIK I S++
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP+I+++ +R + Y+V E+ +L I + + Q+L
Sbjct: 61 LDHPNIMKLYEFF--EDKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
G Y+H N+ HRDLKP+N+L + D +KI DFGL+ A + + + + T +
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKM--KERLGTAY 171
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254
Y APE+ KY D+WS G I LL G P F G+ E
Sbjct: 172 YIAPEV---LRKKYDEKCDVWSCGVILYILLCGYPPFGGQT---------------DQEI 213
Query: 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314
+ RV EK + P ++Q + A +L++ ML +EP R +AEEAL P
Sbjct: 214 LKRV--EKGKFSFD------PPDWTQ----VSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
Query: 315 YF-----------------KGLAKVEREPSAQPVTKMEFEFERRRITK-EDVREL--IYR 354
+ L +++ S+Q + + F ++T E+ +EL I+R
Sbjct: 262 WIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFR 321
Query: 355 EILEYHPQML--KEFLEG 370
++ L KE +EG
Sbjct: 322 QLDNNGDGQLDRKELIEG 339
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 132/309 (42%), Gaps = 45/309 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG +VAIK I+ + + HP+I
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y++ E ++ + A+ + + + Q++ ++Y H
Sbjct: 74 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ + + Y APEL
Sbjct: 129 QKRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDTFCGSPPYAAPELFQG 184
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 185 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 223
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL+R L P R T E+ + D + G +
Sbjct: 224 -------LRGKYRIPFYMSTDCEN-----LLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 271
Query: 322 VEREPSAQP 330
E +P +P
Sbjct: 272 DELKPFVEP 280
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 130/305 (42%), Gaps = 50/305 (16%)
Query: 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXX 78
G RY+ + +G G+YG V D TG + AIK I S++
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP+I+++ + ++ Y+V E+ +L I + + Q+L
Sbjct: 78 LDHPNIMKLYEFF-----EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 132
Query: 138 GLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
G Y+H N+ HRDLKP+N+L + D +KI DFGL+ A + + + + T +
Sbjct: 133 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLS--AHFEVGGKM--KERLGTAY 188
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254
Y APE+ KY D+WS G I LL G P F G+ TD E
Sbjct: 189 YIAPEV---LRKKYDEKCDVWSCGVILYILLCGYPPFGGQ---------TD------QEI 230
Query: 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPL---ALRLLERMLAFEPKDRPTAEEAL 311
+ RV K FS P+ + A +L++ ML +EP R +AEEAL
Sbjct: 231 LKRVEKGK---------------FSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL 275
Query: 312 ADPYF 316
P+
Sbjct: 276 NHPWI 280
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 134/310 (43%), Gaps = 45/310 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA++ I+ + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ ++ + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 187 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 225
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL++ L P R T E+ + D + G
Sbjct: 226 -------LRGKYRIPFYMSTDCEN-----LLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
Query: 322 VEREPSAQPV 331
E +P +P+
Sbjct: 274 DELKPYVEPL 283
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ G +Y+H V HRDLK N+ N
Sbjct: 96 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
D ++KI DFGLA +V ++ T Y APE+ ++ +D+WSIGC
Sbjct: 156 EDLEVKIGDFGLATKVEYDGERKKTL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 209
Query: 220 IFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS 279
I LL GKP F + YL + + IP
Sbjct: 210 IMYTLLVGKPPFETSCL--------------------------KETYLRIKKNEYSIP-- 241
Query: 280 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ NP+A L+++ML +P RPT E L D +F
Sbjct: 242 ---KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ G +Y+H V HRDLK N+ N
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
D ++KI DFGLA +V ++ T Y APE+ ++ +D+WSIGC
Sbjct: 152 EDLEVKIGDFGLATKVEYDGERKKTL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 205
Query: 220 IFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS 279
I LL GKP F + YL + + IP
Sbjct: 206 IMYTLLVGKPPFETSCL--------------------------KETYLRIKKNEYSIP-- 237
Query: 280 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ NP+A L+++ML +P RPT E L D +F
Sbjct: 238 ---KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA+K I+ + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 187 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 225
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL++ L P R T E+ + D + G
Sbjct: 226 -------LRGKYRIPFYMSTDCEN-----LLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
Query: 322 VEREPSAQPV 331
E +P +P+
Sbjct: 274 DELKPYVEPL 283
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
++VV EL L ++ K LT +++L Q++ G +Y+H V HRDLK N+ N
Sbjct: 92 VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
D ++KI DFGLA +V ++ T Y APE+ ++ +D+WSIGC
Sbjct: 152 EDLEVKIGDFGLATKVEYDGERKKTL----CGTPNYIAPEVLSK--KGHSFEVDVWSIGC 205
Query: 220 IFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS 279
I LL GKP F + YL + + IP
Sbjct: 206 IMYTLLVGKPPFETSCL--------------------------KETYLRIKKNEYSIP-- 237
Query: 280 QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+ NP+A L+++ML +P RPT E L D +F
Sbjct: 238 ---KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++G++Y+H V HRDLK N+ N
Sbjct: 101 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 160
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
D +KI DFGLA ++ F+ D T Y APE LC ++ +DIWS+G
Sbjct: 161 DDMDVKIGDFGLATKIEFDGERKK----DLCGTPNYIAPEVLCKK---GHSFEVDIWSLG 213
Query: 219 CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPF 278
CI LL GKP F + Y+ + + +P
Sbjct: 214 CILYTLLVGKPPFETSCL--------------------------KETYIRIKKNEYSVP- 246
Query: 279 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSA 328
+ NP+A L+ RML +P RP+ E L D +F R P++
Sbjct: 247 ----RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTS 292
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 103/230 (44%), Gaps = 41/230 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++G++Y+H V HRDLK N+ N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
D +KI DFGLA ++ F+ D T Y APE LC ++ +DIWS+G
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKK----DLCGTPNYIAPEVLCKK---GHSFEVDIWSLG 229
Query: 219 CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPF 278
CI LL GKP F + Y+ + + +P
Sbjct: 230 CILYTLLVGKPPFETSCL--------------------------KETYIRIKKNEYSVP- 262
Query: 279 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSA 328
+ NP+A L+ RML +P RP+ E L D +F R P++
Sbjct: 263 ----RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTS 308
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 121/297 (40%), Gaps = 47/297 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPD 83
Y + + +G G++G V TG KVA+K +N + HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPH 77
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+++ ++ PS DI++V E + +L I N L + + Q+L G+ Y
Sbjct: 78 IIKLYQVISTPS-----DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYC 132
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L +A KI DFGL+ N F + Y APE +
Sbjct: 133 HRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRXSCGSPNYAAPEVIS 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTD-LLGTPSPEAIARVRN 260
G ++ P +DIWS G I LL G F +V + D + TP
Sbjct: 189 GRLYA--GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---------- 236
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+YL NP + LL+ ML +P R T ++ +FK
Sbjct: 237 ----QYL------------------NPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 133/327 (40%), Gaps = 45/327 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV ++ A K IN D HP+I
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V + + S F Y+VF+L+ +L + I A + + ++Q+L + +IH
Sbjct: 93 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
++ HRDLKP+N+L + CK +K+ DFGLA + W + T Y +PE+
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA---WFGFAGTPGYLSPEV 204
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y +DIW+ G I LL G P F ++ H+L I PSPE
Sbjct: 205 LRK--DPYGKPVDIWACGVILYILLVGYPPFWDED-QHKLYQQIKAGAYDFPSPE----- 256
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L+ +ML P R TA++AL P+
Sbjct: 257 -----------------------WDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQ 293
Query: 319 LAKVEREPSAQPVTKMEFEFERRRITK 345
+ V Q + +F RR K
Sbjct: 294 RSTVASMMHRQETVECLRKFNARRKLK 320
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 133/311 (42%), Gaps = 47/311 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA+K I+ + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLAR-VAFNDTPTAIFWTDYVATRWYRAPELCG 202
+ HRDLK +N+L +AD +KI DFG + F + A + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA-----FCGAPPYAAPELFQ 185
Query: 203 SFFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 186 G--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV--- 225
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLA 320
+R K IPF N LL++ L P R T E+ + D + G
Sbjct: 226 --------LRGKYRIPFYMSTDCEN-----LLKKFLILNPSKRGTLEQIMKDRWMNVGHE 272
Query: 321 KVEREPSAQPV 331
E +P +P+
Sbjct: 273 DDELKPYVEPL 283
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYD-TR--TGEKVAIKKINDIFEHVSDATXXXXXX 73
+E + S +++ +V+G+GS+G V TR +G A+K + V D
Sbjct: 22 SEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFL 132
HP +V++ + + +Y++ + + DL + T E +F+L
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
+L GL ++H+ + +RDLKP+NIL + + +K+ DFGL++ A + A + T
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY---SFCGT 193
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTP- 250
Y APE+ ++ + D WS G + E+LTG F GK+ + I+ LG P
Sbjct: 194 VEYMAPEVVNR--QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251
Query: 251 --SPEAIARVR 259
S EA + +R
Sbjct: 252 FLSTEAQSLLR 262
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 45/309 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG +VAIK I+ + + HP+I
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y++ E ++ + A+ + + + Q++ ++Y H
Sbjct: 77 VKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ + Y APEL
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFS----NEFTVGGKLDAFCGAPPYAAPELFQG 187
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 188 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 226
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL+R L P R T E+ + D + G +
Sbjct: 227 -------LRGKYRIPFYMSTDCEN-----LLKRFLVLNPIKRGTLEQIMKDRWINAGHEE 274
Query: 322 VEREPSAQP 330
E +P +P
Sbjct: 275 DELKPFVEP 283
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA++ I+ + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 187 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 225
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL++ L P R T E+ + D + G
Sbjct: 226 -------LRGKYRIPFYMSTDCEN-----LLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
Query: 322 VEREPSAQPV 331
E +P +P+
Sbjct: 274 DELKPYVEPL 283
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 50/306 (16%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATXXXXXXXXXXXXXHP 82
RYK + V+GKGS+G V D TG++ A+K I+ + +D HP
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 110
Query: 83 DIVEIKHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRG 138
+I+++ F+D Y+V E+ +L I + + + Q+L G
Sbjct: 111 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 162
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y+H + HRDLKP+N+L + D ++I DFGL+ F + D + T +Y
Sbjct: 163 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYY 218
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ Y D+WS G I LL+G P F G N + DI+ +
Sbjct: 219 IAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKV--------- 263
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
EK +Y + + K + S K L+ +ML + P R +A +AL +
Sbjct: 264 -----EKG-KYTFELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 308
Query: 316 FKGLAK 321
+ K
Sbjct: 309 IQTYTK 314
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 45/310 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA+K I+ + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ + + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 187 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 225
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL++ L P R T E+ + D + G
Sbjct: 226 -------LRGKYRIPFYMSTDCEN-----LLKKFLILNPSKRGTLEQIMKDRWMNVGHED 273
Query: 322 VEREPSAQPV 331
E +P P+
Sbjct: 274 DELKPYVAPL 283
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 50/306 (16%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATXXXXXXXXXXXXXHP 82
RYK + V+GKGS+G V D TG++ A+K I+ + +D HP
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 109
Query: 83 DIVEIKHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRG 138
+I+++ F+D Y+V E+ +L I + + + Q+L G
Sbjct: 110 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 161
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y+H + HRDLKP+N+L + D ++I DFGL+ F + D + T +Y
Sbjct: 162 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYY 217
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ Y D+WS G I LL+G P F G N + DI+ +
Sbjct: 218 IAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKV--------- 262
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
EK +Y + + K + S K L+ +ML + P R +A +AL +
Sbjct: 263 -----EKG-KYTFELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 307
Query: 316 FKGLAK 321
+ K
Sbjct: 308 IQTYTK 313
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 50/306 (16%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATXXXXXXXXXXXXXHP 82
RYK + V+GKGS+G V D TG++ A+K I+ + +D HP
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 83 DIVEIKHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRG 138
+I+++ F+D Y+V E+ +L I + + + Q+L G
Sbjct: 93 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 144
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y+H + HRDLKP+N+L + D ++I DFGL+ F + D + T +Y
Sbjct: 145 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYY 200
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ Y D+WS G I LL+G P F G N + DI+ +
Sbjct: 201 IAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKV--------- 245
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
EK +Y + + K + S K L+ +ML + P R +A +AL +
Sbjct: 246 -----EKG-KYTFELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 290
Query: 316 FKGLAK 321
+ K
Sbjct: 291 IQTYTK 296
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 133/310 (42%), Gaps = 45/310 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA+K I+ + S HP+I
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 69 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCH 123
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L +AD +KI DFG + N+ + + Y APEL
Sbjct: 124 QKFIVHRDLKAENLLLDADMNIKIADFGFS----NEFTFGNKLDTFCGSPPYAAPELFQG 179
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 180 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV---- 218
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLAK 321
+R K IPF N LL++ L P R T E+ + D + G
Sbjct: 219 -------LRGKYRIPFYMSTDCEN-----LLKKFLILNPSKRGTLEQIMKDRWMNVGHED 266
Query: 322 VEREPSAQPV 331
E +P +P+
Sbjct: 267 DELKPYVEPL 276
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 133/306 (43%), Gaps = 50/306 (16%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATXXXXXXXXXXXXXHP 82
RYK + V+GKGS+G V D TG++ A+K I+ + +D HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 83 DIVEIKHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRG 138
+I+++ F+D Y+V E+ +L I + + + Q+L G
Sbjct: 87 NIMKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y+H + HRDLKP+N+L + D ++I DFGL+ F + D + T +Y
Sbjct: 139 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKM---KDKIGTAYY 194
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ Y D+WS G I LL+G P F G N + DI+ +
Sbjct: 195 IAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN---EYDILKKV--------- 239
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
EK +Y + + K + S K L+ +ML + P R +A +AL +
Sbjct: 240 -----EKG-KYTFELPQWKKVSESAK---------DLIRKMLTYVPSMRISARDALDHEW 284
Query: 316 FKGLAK 321
+ K
Sbjct: 285 IQTYTK 290
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 136/344 (39%), Gaps = 48/344 (13%)
Query: 10 SADVDFFTE--YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT 67
S+ VD TE Y + S Y++ E +GKG++ VV G++ A K IN D
Sbjct: 8 SSGVDLGTENLYFQ-SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ 66
Query: 68 XXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPE 126
HP+IV L S E Y++F+L+ +L + I A + +
Sbjct: 67 KLEREARICRLLKHPNIVR-----LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 121
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTA 183
+ Q+L + + H V HRDLKP+N+L + K +K+ DFGLA +
Sbjct: 122 DASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA- 180
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--D 241
W + T Y +PE+ Y +D+W+ G I LL G P F ++ H+L
Sbjct: 181 --WFGFAGTPGYLSPEVLRK--DPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQ 235
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
I PSPE + P A L+ +ML P
Sbjct: 236 IKAGAYDFPSPE----------------------------WDTVTPEAKDLINKMLTINP 267
Query: 302 KDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITK 345
R TA EAL P+ + V Q +F RR K
Sbjct: 268 SKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 129/327 (39%), Gaps = 45/327 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV TG++ A K IN D HP+I
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V + + S F Y+VF+L+ +L + I A + + + Q+L + + H
Sbjct: 66 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + K +K+ DFGLA D W + T Y +PE+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y +D+W+ G I LL G P F ++ H+L I PSPE
Sbjct: 178 LRK--DPYGKPVDMWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE----- 229
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L+ +ML P R TA EAL P+
Sbjct: 230 -----------------------WDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
Query: 319 LAKVEREPSAQPVTKMEFEFERRRITK 345
+ V Q +F RR K
Sbjct: 267 RSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++G++Y+H V HRDLK N+ N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
D +KI DFGLA ++ F+ T Y APE LC ++ +DIWS+G
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKTL----CGTPNYIAPEVLCKK---GHSFEVDIWSLG 229
Query: 219 CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPF 278
CI LL GKP F + Y+ + + +P
Sbjct: 230 CILYTLLVGKPPFETSCL--------------------------KETYIRIKKNEYSVP- 262
Query: 279 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSA 328
+ NP+A L+ RML +P RP+ E L D +F R P++
Sbjct: 263 ----RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTS 308
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 129/327 (39%), Gaps = 45/327 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV TG++ A K IN D HP+I
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V + + S F Y+VF+L+ +L + I A + + + Q+L + + H
Sbjct: 66 VRLHDSI---SEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCH 120
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + K +K+ DFGLA D W + T Y +PE+
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSPEV 177
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y +D+W+ G I LL G P F ++ H+L I PSPE
Sbjct: 178 LRK--DPYGKPVDMWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE----- 229
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L+ +ML P R TA EAL P+
Sbjct: 230 -----------------------WDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQ 266
Query: 319 LAKVEREPSAQPVTKMEFEFERRRITK 345
+ V Q +F RR K
Sbjct: 267 RSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
+YVV E+ L ++ K +T ++F+ Q ++G++Y+H V HRDLK N+ N
Sbjct: 117 VYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
Query: 161 ADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIG 218
D +KI DFGLA ++ F+ T Y APE LC ++ +DIWS+G
Sbjct: 177 DDMDVKIGDFGLATKIEFDGERKKXL----CGTPNYIAPEVLCKK---GHSFEVDIWSLG 229
Query: 219 CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPF 278
CI LL GKP F + Y+ + + +P
Sbjct: 230 CILYTLLVGKPPFETSCL--------------------------KETYIRIKKNEYSVP- 262
Query: 279 SQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSA 328
+ NP+A L+ RML +P RP+ E L D +F R P++
Sbjct: 263 ----RHINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLPTS 308
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG+YG+V + D ++AIK+I + D+ H I
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-----RDSRYSQPLHEEIALHKHLKHKNIVQ 83
Query: 90 ILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQ---FFLYQLLRGLKYIHTAN 146
L S F I++ ++ L ++++ ++ Q F+ Q+L GLKY+H
Sbjct: 84 YLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 147 VFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+ HRD+K N+L N LKI DFG ++ P +T T Y APE+
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGP 199
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A DIWS+GC E+ TGKP F
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + E S IE VIG G +G VCS G++ VAIK + +
Sbjct: 15 FAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE-KQRRDFLGE 73
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFF 131
HP+I+ ++ ++ + K + +V E ME+ L +K ND QF
Sbjct: 74 ASIMGQFDHPNIIHLEGVV-----TKSKPVMIVTEYMENGSLDTFLKKNDG------QFT 122
Query: 132 LYQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184
+ QL+ G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 181
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ T + RW APE F K+T A D+WS G + E+++
Sbjct: 182 YTTRGGKIPIRW-TAPEAIA--FRKFTSASDVWSYGIVMWEVVS 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 25 YKIEEVIGKGSYGVVCSA---YDTRTGEKVAIKKIND--IFEHVSDATXXXXXXXXXXXX 79
+++ V+GKG YG V TG+ A+K + I + D
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
HP IV++ + + +Y++ E L +L ++ + F+L ++
Sbjct: 79 KHPFIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
L ++H + +RDLKP+NI+ N +K+ DFGL + + +D + T Y AP
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT---HTFCGTIEYMAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
E+ S + A+D WS+G + ++LTG P F G+N +D
Sbjct: 191 EIL--MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 49/295 (16%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G++G V + +G + IK IN V HP+I++I +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVP-MEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 91 LLPPSRREFKDIYVVFELMESD--LHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHTA 145
++ ++Y+V E E L +++ A L+ + + Q++ L Y H+
Sbjct: 89 F-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 146 NVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
+V H+DLKP+NIL + +KI DFGLA + +D + T+ T Y APE+
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS----TNAAGTALYMAPEV-- 197
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
F T DIWS G + LLTG F G ++ E + + K
Sbjct: 198 -FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL----------------EEVQQKATYK 240
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
Y R P+ P A+ LL++ML +P+ RP+A + L +FK
Sbjct: 241 EPNYAVECR---PL---------TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 13/206 (6%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG+YG+V + D ++AIK+I + D+ H I
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPE-----RDSRYSQPLHEEIALHKHLKHKNIVQ 69
Query: 90 ILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQ---FFLYQLLRGLKYIHTAN 146
L S F I++ ++ L ++++ ++ Q F+ Q+L GLKY+H
Sbjct: 70 YLGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 147 VFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+ HRD+K N+L N LKI DFG ++ P + T Y APE+
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT---ETFTGTLQYMAPEIIDKGP 185
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A DIWS+GC E+ TGKP F
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 101/223 (45%), Gaps = 16/223 (7%)
Query: 25 YKIEEVIGKGSYGVVCSA---YDTRTGEKVAIKKIND--IFEHVSDATXXXXXXXXXXXX 79
+++ V+GKG YG V TG+ A+K + I + D
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
HP IV++ + + +Y++ E L +L ++ + F+L ++
Sbjct: 79 KHPFIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
L ++H + +RDLKP+NI+ N +K+ DFGL + + +D + T Y AP
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT---HXFCGTIEYMAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
E+ S + A+D WS+G + ++LTG P F G+N +D
Sbjct: 191 EIL--MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 128/308 (41%), Gaps = 57/308 (18%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD----ATXXXXXXXXXXXXX 80
Y++ EVIGKG++ VV + TG++ A+K I D+ + S
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME-SDL-HQVIKAND------DLTPEHYQFFL 132
HP IVE+ +Y+VFE M+ +DL +++K D + HY +
Sbjct: 85 HPHIVELLETYSSDGM-----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY---M 136
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDY 189
Q+L L+Y H N+ HRD+KP+N+L + +K+ DFG VA + +
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFG---VAIQLGESGLVAGGR 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249
V T + APE+ Y +D+W G I LL+G F G
Sbjct: 194 VGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTK-------------- 237
Query: 250 PSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEE 309
R + K K +++ + + A L+ RML +P +R T E
Sbjct: 238 --------------ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283
Query: 310 ALADPYFK 317
AL P+ K
Sbjct: 284 ALNHPWLK 291
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDA 66
F + + S KIE+VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 22 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 81
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD-LT 124
+ HP+I+ ++ ++ + K + ++ E ME+ L ++ ND T
Sbjct: 82 SIMGQFD-------HPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184
L + G+KY+ + HRDL +NIL N++ K+ DFG++RV D P A
Sbjct: 130 VIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAA 188
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ T + RW APE + K+T A D+WS G + E+++
Sbjct: 189 YTTRGGKIPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 229
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 16/247 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A D TG++VAI+++N + +P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
IV L +++VV E + + + + L+ L+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL D +K+ DFG TP ++ V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP---SPEAIARVRN 260
Y P +DIWS+G + E++ G+P + +N + L ++ GTP +PE ++ +
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAIFR 247
Query: 261 EKARRYL 267
+ R L
Sbjct: 248 DFLNRCL 254
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 107/221 (48%), Gaps = 21/221 (9%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF----EHVSDATXXXXXXXXXXXX 79
RYKI + +G G V A DT KVAIK I F E
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI---FIPPREKEETLKRFEREVHNSSQL 68
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRG 138
H +IV + + E Y+V E +E L + I+++ L+ + F Q+L G
Sbjct: 69 SHQNIVSMIDV-----DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDG 123
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-ATRWYRA 197
+K+ H + HRD+KP+NIL +++ LKI DFG+A+ + T++ T++V T Y +
Sbjct: 124 IKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL---SETSLTQTNHVLGTVQYFS 180
Query: 198 PELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
PE G + T DI+SIG + E+L G+P F G+ V
Sbjct: 181 PEQAKGEATDECT---DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATXXXXXXXXXXXXXHP 82
RYK + V+GKGS+G V D TG++ A+K I+ + +D HP
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 86
Query: 83 DIVEIKHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRG 138
+I ++ F+D Y+V E+ +L I + + + Q+L G
Sbjct: 87 NIXKLYEF--------FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y H + HRDLKP+N+L + D ++I DFGL+ F + D + T +Y
Sbjct: 139 ITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKX---KDKIGTAYY 194
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
APE+ Y D+WS G I LL+G P F G N
Sbjct: 195 IAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNGAN 231
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 109/224 (48%), Gaps = 41/224 (18%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDATXXXXXX 73
S KIE+VIG G +G VCS + G++ VAIK + + + +S+A+
Sbjct: 33 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 92
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFL 132
HP+++ ++ ++ + + ++ E ME+ L ++ ND QF +
Sbjct: 93 -------HPNVIHLEGVVTKST-----PVMIITEFMENGSLDSFLRQNDG------QFTV 134
Query: 133 YQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185
QL+ G+KY+ N HRDL +NIL N++ K+ DFGL+R +DT +
Sbjct: 135 IQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 186 WTDY---VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ + RW APE + K+T A D+WS G + E+++
Sbjct: 195 TSALGGKIPIRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 235
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDA 66
F + + S KIE+VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 7 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD-LT 124
+ HP+I+ ++ ++ + K + ++ E ME+ L ++ ND T
Sbjct: 67 SIMGQFD-------HPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFT 114
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184
L + G+KY+ + HRDL +NIL N++ K+ DFG++RV D P A
Sbjct: 115 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAA 173
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ T + RW APE + K+T A D+WS G + E+++
Sbjct: 174 YTTRGGKIPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 214
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 102/214 (47%), Gaps = 13/214 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++++ IGKG++ V A TG +VA+K I+ + + HP+I
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + + Q++ ++Y H
Sbjct: 77 VKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCH 131
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLK +N+L + D +KI DFG + N+ + + Y APEL
Sbjct: 132 QKYIVHRDLKAENLLLDGDMNIKIADFGFS----NEFTVGNKLDTFCGSPPYAAPELFQG 187
Query: 204 FFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNV 236
KY P +D+WS+G I L++G F G+N+
Sbjct: 188 --KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDA 66
F + + S KIE+VIG G +G VCS G++ VAIK + + + +S+A
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD-LT 124
+ HP+I+ ++ ++ + K + ++ E ME+ L ++ ND T
Sbjct: 61 SIMGQFD-------HPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFT 108
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184
L + G+KY+ + HRDL +NIL N++ K+ DFG++RV D P A
Sbjct: 109 VIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAA 167
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ T + RW APE + K+T A D+WS G + E+++
Sbjct: 168 YTTRGGKIPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 208
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 132/311 (42%), Gaps = 47/311 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ + IGKG++ V A TG++VA+K I+ + S HP+I
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V++ ++ K +Y+V E ++ + A+ + + Q++ ++Y H
Sbjct: 76 VKLFEVIETE-----KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLAR-VAFNDTPTAIFWTDYVATRWYRAPELCG 202
+ HRDLK +N+L +AD +KI DFG + F + A + Y APEL
Sbjct: 131 QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDA-----FCGAPPYAAPELFQ 185
Query: 203 SFFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
KY P +D+WS+G I L++G F G+N+ E RV
Sbjct: 186 G--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL---------------KELRERV--- 225
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK-GLA 320
+R K IPF N LL++ L P R T E+ D + G
Sbjct: 226 --------LRGKYRIPFYXSTDCEN-----LLKKFLILNPSKRGTLEQIXKDRWXNVGHE 272
Query: 321 KVEREPSAQPV 331
E +P +P+
Sbjct: 273 DDELKPYVEPL 283
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A D TG++VAI+++N + +P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
IV L +++VV E + + + + L+ L+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL D +K+ DFG TP + V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP---SPEAIARVRN 260
Y P +DIWS+G + E++ G+P + +N + L ++ GTP +PE ++ +
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAIFR 247
Query: 261 EKARRYL 267
+ R L
Sbjct: 248 DFLNRCL 254
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A D TG++VAI+++N + +P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
IV L +++VV E + + + + L+ L+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL D +K+ DFG TP + V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP---SPEAIARVRN 260
Y P +DIWS+G + E++ G+P + +N + L ++ GTP +PE ++ +
Sbjct: 191 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAIFR 247
Query: 261 EKARRYL 267
+ R L
Sbjct: 248 DFLNRCL 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A D TG++VAI+++N + +P+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
IV L +++VV E + + + + L+ L+++H
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+K NIL D +K+ DFG TP + V T ++ APE+
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP---SPEAIARVRN 260
Y P +DIWS+G + E++ G+P + +N + L ++ GTP +PE ++ +
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAIFR 248
Query: 261 EKARRYL 267
+ R L
Sbjct: 249 DFLNRCL 255
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 25/226 (11%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXX-XXXHPD 83
+K+ ++GKGS+ V A TG +VAIK I+ + + HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 84 IVEIKHILLPPSRREFKD---IYVVFEL-----MESDLHQVIKANDDLTPEHYQFFLYQL 135
I+E+ + F+D +Y+V E+ M L +K + H F++Q+
Sbjct: 73 ILELYNY--------FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARH---FMHQI 121
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ G+ Y+H+ + HRDL N+L + +KI DFGLA P +T T Y
Sbjct: 122 ITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYT-LCGTPNY 178
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
+PE+ S + D+WS+GC+F LL G+P F V + L+
Sbjct: 179 ISPEIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 85/190 (44%), Gaps = 37/190 (19%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
Q+L G+ Y+H N+ HRD+KP+NIL N+ +KI DFGL+ D D +
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL----RDRL 209
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250
T +Y APE+ KY D+WS G I LL G P F G+N
Sbjct: 210 GTAYYIAPEVLK---KKYNEKCDVWSCGVIMYILLCGYPPFGGQN--------------- 251
Query: 251 SPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 310
+ I +V EK + Y + N + A L++ ML ++ R TAEEA
Sbjct: 252 DQDIIKKV--EKGKYYFD----------FNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299
Query: 311 LADPYFKGLA 320
L + K A
Sbjct: 300 LNSRWIKKYA 309
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 127/308 (41%), Gaps = 52/308 (16%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------DIFEHVSDATXXXXXXXX 75
+Y ++VIG+G VV TG + A+K + + E V +AT
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQ 134
HP I I L S +++VF+LM + +L + L+ + + +
Sbjct: 155 QVAG-HPHI-----ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 135 LLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
LL + ++H N+ HRDLKP+NIL + + ++++ DFG + + P + T
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGF---SCHLEPGEKL-RELCGTPG 264
Query: 195 YRAPELCGSFFSKYTPA----IDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGT 249
Y APE+ + P +D+W+ G I LL G P F + + L IM
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQF 324
Query: 250 PSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEE 309
SPE R K L+ R+L +P+ R TAE+
Sbjct: 325 SSPEWDDRSSTVKD----------------------------LISRLLQVDPEARLTAEQ 356
Query: 310 ALADPYFK 317
AL P+F+
Sbjct: 357 ALQHPFFE 364
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 127/304 (41%), Gaps = 43/304 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +V+G G++ V A D RT + VAIK I + + HP+I
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNI 78
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V + I +Y++ +L+ +L I T ++Q+L +KY+H
Sbjct: 79 VALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLH 133
Query: 144 TANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + D K+ I DFGL+++ + P ++ T T Y APE+
Sbjct: 134 DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPEV 189
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260
Y+ A+D WSIG I LL G P F +N E I +
Sbjct: 190 LAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF------------EQILKAEY 235
Query: 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
E Y + +A L+E+ +P+ R T E+AL P+ G
Sbjct: 236 EFDSPYWDDISD-----------SAKDFIRHLMEK----DPEKRFTCEQALQHPWIAGDT 280
Query: 321 KVER 324
+++
Sbjct: 281 ALDK 284
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 151/348 (43%), Gaps = 66/348 (18%)
Query: 28 EEVIGKGSYGVVC--SAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
++V+G G+ G + +D R VA+K+I + E S A HP+++
Sbjct: 29 KDVLGHGAEGTIVYRGMFDNR---DVAVKRI--LPECFSFADREVQLLRESDE--HPNVI 81
Query: 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND----DLTPEHYQFFLYQLLRGLKY 141
R+F+ Y+ EL + L + ++ D L P L Q GL +
Sbjct: 82 RY---FCTEKDRQFQ--YIAIELCAATLQEYVEQKDFAHLGLEP---ITLLQQTTSGLAH 133
Query: 142 IHTANVFHRDLKPKNILA---NADCKLK--ICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
+H+ N+ HRDLKP NIL NA K+K I DFGL + + + T +
Sbjct: 134 LHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWI 193
Query: 197 APELCGSFFSKY-TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ + T +DI+S GC+F +++ GK++ Q +I LLG S + +
Sbjct: 194 APEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---LLGACSLDCL 250
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
++E + +A L+E+M+A +P+ RP+A+ L P+
Sbjct: 251 HPEKHE------------------------DVIARELIEKMIAMDPQKRPSAKHVLKHPF 286
Query: 316 FKGLAK-----------VEREPSAQPVTKMEFEFERRRITKEDVRELI 352
F L K +E+E P+ K + E R + K D RE I
Sbjct: 287 FWSLEKQLQFFQDVSDRIEKESLDGPIVK-QLERGGRAVVKMDWRENI 333
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 117/301 (38%), Gaps = 50/301 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-SDATXXXXXXXXXXXXXHPD 83
Y++ IG GSYG C ++ K+ + K D ++ HP+
Sbjct: 8 YEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVI----KANDDLTPEHYQFFLYQLLRG 138
IV ++ R +Y+V E E DL VI K L E + QL
Sbjct: 67 IVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 139 LKYIHTAN-----VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
LK H + V HRDLKP N+ + +K+ DFGLAR+ +DT F +V T
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKTFVGTP 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
+Y +PE Y DIWS+GC+ EL P F E
Sbjct: 181 YYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFT---------------AFSQKE 223
Query: 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313
++R K RR P +S + ++ RML + RP+ EE L +
Sbjct: 224 LAGKIREGKFRRI--------PYRYSDELNE-------IITRMLNLKDYHRPSVEEILEN 268
Query: 314 P 314
P
Sbjct: 269 P 269
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 111/239 (46%), Gaps = 29/239 (12%)
Query: 1 MQPDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKIN 57
+ P+ + + V F + + S KIE VIG G +G VCS G++ VAIK +
Sbjct: 21 IDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK 80
Query: 58 DIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESD-LHQV 116
+ HP++V ++ ++ K + +V E ME+ L
Sbjct: 81 VGYTE-KQRRDFLCEASIMGQFDHPNVVHLEGVVT-----RGKPVMIVIEFMENGALDAF 134
Query: 117 IKANDDLTPEHYQFFLYQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICD 169
++ +D QF + QL+ G++Y+ HRDL +NIL N++ K+ D
Sbjct: 135 LRKHDG------QFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSD 188
Query: 170 FGLARVAFNDTPTAIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FGL+RV D P A++ T + RW APE + K+T A D+WS G + E+++
Sbjct: 189 FGLSRV-IEDDPEAVYTTTGGKIPVRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 243
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +E IG+GS+G V A T + A KKI F V D HP+I
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNI 85
Query: 85 VEIKHILLPPSRREFKDIYVVFEL------MESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
+ + + DIY+V EL E +H+ + D + +L
Sbjct: 86 IRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR-----IMKDVLSA 135
Query: 139 LKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y H NV HRDLKP+N L + D LK+ DFGLA F P + T V T +Y
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFK--PGKMMRTK-VGTPYY 191
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
+P++ Y P D WS G + LL G P F TD E +
Sbjct: 192 VSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPPFSAP---------TDX------EVM 233
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEALADP 314
++R + F +K + N +P A L+ R+L PK R T+ +AL
Sbjct: 234 LKIR-------------EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE 280
Query: 315 YFKGLAKVEREPSAQP 330
+F E++ S+ P
Sbjct: 281 WF------EKQLSSSP 290
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
Y +V+G G++ V A D RT + VAIK I + E HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
IV + I +Y++ +L+ +L I T ++Q+L +KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + D K+ I DFGL+++ + P ++ T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259
+ Y+ A+D WSIG I LL G P F +N E I +
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF------------EQILKAE 234
Query: 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319
E Y + +A L+E+ +P+ R T E+AL P+ G
Sbjct: 235 YEFDSPYWDDISD-----------SAKDFIRHLMEK----DPEKRFTCEQALQHPWIAGD 279
Query: 320 AKVER 324
+++
Sbjct: 280 TALDK 284
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
Y +V+G G++ V A D RT + VAIK I + E HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
IV + I +Y++ +L+ +L I T ++Q+L +KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + D K+ I DFGL+++ + P ++ T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ Y+ A+D WSIG I LL G P F +N
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDEN 222
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 117/301 (38%), Gaps = 50/301 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-SDATXXXXXXXXXXXXXHPD 83
Y++ IG GSYG C ++ K+ + K D ++ HP+
Sbjct: 8 YEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVI----KANDDLTPEHYQFFLYQLLRG 138
IV ++ R +Y+V E E DL VI K L E + QL
Sbjct: 67 IVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 139 LKYIHTAN-----VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
LK H + V HRDLKP N+ + +K+ DFGLAR+ +DT F +V T
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKAFVGTP 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
+Y +PE Y DIWS+GC+ EL P F E
Sbjct: 181 YYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFT---------------AFSQKE 223
Query: 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313
++R K RR P +S + ++ RML + RP+ EE L +
Sbjct: 224 LAGKIREGKFRRI--------PYRYSDELNE-------IITRMLNLKDYHRPSVEEILEN 268
Query: 314 P 314
P
Sbjct: 269 P 269
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 127/305 (41%), Gaps = 45/305 (14%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
Y +V+G G++ V A D RT + VAIK I + E HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALE--GKEGSMENEIAVLHKIKHPN 77
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
IV + I +Y++ +L+ +L I T ++Q+L +KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + D K+ I DFGL+++ + P ++ T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259
+ Y+ A+D WSIG I LL G P F +N E I +
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF------------EQILKAE 234
Query: 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319
E Y + +A L+E+ +P+ R T E+AL P+ G
Sbjct: 235 YEFDSPYWDDISD-----------SAKDFIRHLMEK----DPEKRFTCEQALQHPWIAGD 279
Query: 320 AKVER 324
+++
Sbjct: 280 TALDK 284
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 129/316 (40%), Gaps = 63/316 (19%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y +E IG+GS+G V A T + A KKI F V D HP+I
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKSLDHPNI 68
Query: 85 VEIKHILLPPSRREFKDIYVVFEL------MESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
+ + + DIY+V EL E +H+ + D + +L
Sbjct: 69 IRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR-----IMKDVLSA 118
Query: 139 LKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
+ Y H NV HRDLKP+N L + D LK+ DFGLA F P + T V T +Y
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFK--PGKMMRTK-VGTPYY 174
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
+P++ Y P D WS G + LL G P F TD E +
Sbjct: 175 VSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPPFSAP---------TDX------EVM 216
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEALADP 314
++R + F +K + N +P A L+ R+L PK R T+ +AL
Sbjct: 217 LKIR-------------EGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHE 263
Query: 315 YFKGLAKVEREPSAQP 330
+F E++ S+ P
Sbjct: 264 WF------EKQLSSSP 273
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHP 82
RY++ E++G G V A D R VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIL--------LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLY 133
IV + LP Y+V E ++ L ++ +TP+ +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-AT 192
+ L + H + HRD+KP NIL +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR-AIADSGNSVXQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ E+LTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%), Gaps = 16/247 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y E IG+G+ G V +A D TG++VAI+++N + +P+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
IV L +++VV E + + + + L+ L+++H
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HR++K NIL D +K+ DFG TP + V T ++ APE+
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP---SPEAIARVRN 260
Y P +DIWS+G + E++ G+P + +N + L ++ GTP +PE ++ +
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAIFR 248
Query: 261 EKARRYL 267
+ R L
Sbjct: 249 DFLNRCL 255
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 41/224 (18%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDATXXXXXX 73
S KIE+VIG G +G VCS + G++ VAIK + + + +S+A+
Sbjct: 7 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD 66
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFL 132
HP+++ ++ ++ + + ++ E ME+ L ++ ND QF +
Sbjct: 67 -------HPNVIHLEGVVTKST-----PVMIITEFMENGSLDSFLRQNDG------QFTV 108
Query: 133 YQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185
QL+ G+KY+ N HR L +NIL N++ K+ DFGL+R +DT +
Sbjct: 109 IQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 186 WTDY---VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ + RW APE + K+T A D+WS G + E+++
Sbjct: 169 TSALGGKIPIRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 209
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 119/293 (40%), Gaps = 41/293 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ E IG G + V A TGE VAIK I D SD H I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIKTEIEALKNLRHQHI 70
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
++ H+L ++ I++V E +L I + D L+ E + Q++ + Y+H
Sbjct: 71 CQLYHVLETANK-----IFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRDLKP+N+L + KLK+ DFGL + + + Y APEL
Sbjct: 126 SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL--QTCCGSLAYAAPELIQG 183
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
S D+WS+G + L+ G F NV+
Sbjct: 184 -KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-------------------------- 216
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
Y MR K +P +P ++ LL++ML +PK R + + L P+
Sbjct: 217 ALYKKIMRGKYDVP-----KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 129/316 (40%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPA---IDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T + APE+ Y P D+WSIG I LL+G F
Sbjct: 178 F-----GTPAFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 126/327 (38%), Gaps = 45/327 (13%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y++ E +GKG++ VV G++ A IN D HP+I
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V L S E Y++F+L+ +L + I A + + + Q+L + + H
Sbjct: 73 VR-----LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 144 TANVFHRDLKPKNILANADCK---LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
V HR+LKP+N+L + K +K+ DFGLA + W + T Y +PE+
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEV 184
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL--DIMTDLLGTPSPEAIARV 258
Y +D+W+ G I LL G P F ++ H+L I PSPE
Sbjct: 185 LRK--DPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE----- 236
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
+ P A L+ +ML P R TA EAL P+
Sbjct: 237 -----------------------WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273
Query: 319 LAKVEREPSAQPVTKMEFEFERRRITK 345
+ V Q +F RR K
Sbjct: 274 RSTVASCMHRQETVDCLKKFNARRKLK 300
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHP 82
RY++ E++G G V A D R VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIL--------LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLY 133
IV + LP Y+V E ++ L ++ +TP+ +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-AT 192
+ L + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ E+LTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 65
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 66 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 177 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 216
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 217 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 259
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 260 KKRMTIQDSLQHPWIK 275
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHP 82
RY++ E++G G V A D R VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIL--------LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLY 133
IV + LP Y+V E ++ L ++ +TP+ +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-AT 192
+ L + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ E+LTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 65
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 66 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 116
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 117 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 177 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 216
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 217 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 259
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 260 KKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHP 82
RY++ E++G G V A D R VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIL--------LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLY 133
IV + LP Y+V E ++ L ++ +TP+ +
Sbjct: 73 AIVAVYATGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-AT 192
+ L + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ E+LTG+P F G + V
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 25/224 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHP 82
RY++ E++G G V A D R VA+K + D+ S HP
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 83 DIVEIKHIL--------LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLY 133
IV + LP Y+V E ++ L ++ +TP+ +
Sbjct: 73 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 123
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-AT 192
+ L + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 124 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 182
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
Y +PE G + D++S+GC+ E+LTG+P F G +
Sbjct: 183 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 117/301 (38%), Gaps = 50/301 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-SDATXXXXXXXXXXXXXHPD 83
Y++ IG GSYG C ++ K+ + K D ++ HP+
Sbjct: 8 YEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVI----KANDDLTPEHYQFFLYQLLRG 138
IV ++ R +Y+V E E DL VI K L E + QL
Sbjct: 67 IVRYYDRIID---RTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 139 LKYIHTAN-----VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
LK H + V HRDLKP N+ + +K+ DFGLAR+ +D F ++V T
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED---FAKEFVGTP 180
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
+Y +PE Y DIWS+GC+ EL P F E
Sbjct: 181 YYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFT---------------AFSQKE 223
Query: 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313
++R K RR P +S + ++ RML + RP+ EE L +
Sbjct: 224 LAGKIREGKFRRI--------PYRYSDELNE-------IITRMLNLKDYHRPSVEEILEN 268
Query: 314 P 314
P
Sbjct: 269 P 269
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 92
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELL 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 14/217 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXH 81
Y + + +G G++G V TG KVA+K +N + H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLK 140
P I+++ ++ P+ D ++V E + +L I + + + Q+L +
Sbjct: 71 PHIIKLYQVISTPT-----DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A KI DFGL+ N F D + Y APE
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRDSCGSPNYAAPEV 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV 236
+ G ++ P +DIWS G I LL G F ++V
Sbjct: 182 ISGRLYA--GPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 207 TE--KSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 69
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 184
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 185 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 98/214 (45%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y + + ++ ++ T +F+ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCT----RFYTAEIVSALEY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ + D+W++GCI +L+ G P F N
Sbjct: 207 TE--KSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 68
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 184 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 92
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 67
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 183 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND--IFEHVSDATXXXXXXXXXXXXXHP 82
++I IGKGS+G VC T + A+K +N E ++ HP
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVER-NEVRNVFKELQIMQGLEHP 75
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+V + + S ++ +D+++V +L+ DL ++ N E + F+ +L+ L Y
Sbjct: 76 FLVNLWY-----SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+ + HRD+KP NIL + + I DF +A + +T T T+ Y APE+
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI----TTMAGTKPYMAPEMF 186
Query: 202 GSF-FSKYTPAIDIWSIGCIFAELLTGK 228
S + Y+ A+D WS+G ELL G+
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 96
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 211
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 212 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 94
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 209
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 210 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 66
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 181
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 182 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 100/226 (44%), Gaps = 25/226 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHP 82
RY++ E++G G V A D R VA+K + D+ S HP
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 89
Query: 83 DIVEIKHIL--------LPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLY 133
IV + LP Y+V E ++ L ++ +TP+ +
Sbjct: 90 AIVAVYDTGEAETPAGPLP---------YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIA 140
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV-AT 192
+ L + H + HRD+KP NI+ +A +K+ DFG+AR A D+ ++ T V T
Sbjct: 141 DACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGT 199
Query: 193 RWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
Y +PE G + D++S+GC+ E+LTG+P F G + V
Sbjct: 200 AQYLSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 88
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANSFVGTAQYVSPELL 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 23/232 (9%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI---NDI 59
P +R+ D D T+ E + + E +G+GSYG V A TG+ VAIK++ +D+
Sbjct: 10 PPRRQLKKLDEDSLTKQPE-EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL 68
Query: 60 FEHVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIK 118
E + + + P +V+ S + D+++V E + + +I+
Sbjct: 69 QEIIKEISIMQQCDS-------PHVVKYYG-----SYFKNTDLWIVMEYCGAGSVSDIIR 116
Query: 119 A-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177
N LT + L L+GL+Y+H HRD+K NIL N + K+ DFG VA
Sbjct: 117 LRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFG---VAG 173
Query: 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKP 229
T + T ++ APE+ Y DIWS+G E+ GKP
Sbjct: 174 QLTDXMAKRNXVIGTPFWMAPEVIQEI--GYNCVADIWSLGITAIEMAEGKP 223
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDATXXXXXX 73
S KIEEVIG G +G VC G+K VAIK + + E +S+A+
Sbjct: 14 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 73
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKAND-DLTPEHYQFF 131
HP+I+ ++ ++ + ++ E ME+ L ++ ND T
Sbjct: 74 -------HPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM 121
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY-- 189
L + G++Y+ + HRDL +NIL N++ K+ DFGL+R ++ + +
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGG 181
Query: 190 -VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW APE F K+T A D WS G + E+++
Sbjct: 182 KIPIRW-TAPEAIA--FRKFTSASDAWSYGIVMWEVMS 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 126/316 (39%), Gaps = 75/316 (23%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--------------DIFEHVSDATXXX 70
Y E +G G + VV + TG + A K I DI VS
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS------ 66
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
HP+++ + + + D+ ++ EL+ +L + + LT E
Sbjct: 67 ----ILKEIQHPNVITLHEVYENKT-----DVILIGELVAGGELFDFLAEKESLTEEEAT 117
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLA-RVAFNDTPTAI 184
FL Q+L G+ Y+H+ + H DLKP+NI L + + ++KI DFGLA ++ F + I
Sbjct: 118 EFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI 177
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F T PE Y P D+WSIG I LL+G F
Sbjct: 178 FGT----------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP 301
LG E +A V A Y + F N + LA + R+L +P
Sbjct: 218 -----LGDTKQETLANV---SAVNYEFE---------DEYFSNTSALAKDFIRRLLVKDP 260
Query: 302 KDRPTAEEALADPYFK 317
K R T +++L P+ K
Sbjct: 261 KKRMTIQDSLQHPWIK 276
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 88
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ V A + T + AIK + H+ + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 73
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 189 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 126/309 (40%), Gaps = 49/309 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y+++EVIG G+ VV +AY EKVAIK+IN + + + HP+I
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTSMDELLKEIQAMSQCHHPNI 75
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDD-----LTPEHYQFFLYQL 135
V + ++++V +L+ D+ + I A + L L ++
Sbjct: 76 VSYYTSFVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI----FWTDYVA 191
L GL+Y+H HRD+K NIL D ++I DFG++ AF T I +V
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS--AFLATGGDITRNKVRKTFVG 188
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKP---LFPGKNVVHQLDIMTDLLG 248
T + APE+ Y DIWS G EL TG +P V +M L
Sbjct: 189 TPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-----LMLTLQN 242
Query: 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE 308
P E ++Y S RK ++ L +P+ RPTA
Sbjct: 243 DPPSLETGVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAA 283
Query: 309 EALADPYFK 317
E L +F+
Sbjct: 284 ELLRHKFFQ 292
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 131/326 (40%), Gaps = 61/326 (18%)
Query: 7 KKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD- 65
+ S AD D E Y++ EVIGKG + VV + TG++ A+K I D+ + S
Sbjct: 14 RGSMADDDVLFE----DVYELCEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSP 68
Query: 66 ---ATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDL-HQVIKAN 120
HP IVE L + +Y+VFE M+ +DL +++K
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVE-----LLETYSSDGMLYMVFEFMDGADLCFEIVKRA 123
Query: 121 D------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFG 171
D + HY + Q+L L+Y H N+ HRD+KP +L + +K+ FG
Sbjct: 124 DAGFVYSEAVASHY---MRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG 180
Query: 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
VA + + V T + APE+ Y +D+W G I LL+G F
Sbjct: 181 ---VAIQLGESGLVAGGRVGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPF 235
Query: 232 PGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR 291
G R + K K +++ + + A
Sbjct: 236 YGTK----------------------------ERLFEGIIKGKYKMNPRQWSHISESAKD 267
Query: 292 LLERMLAFEPKDRPTAEEALADPYFK 317
L+ RML +P +R T EAL P+ K
Sbjct: 268 LVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 126/309 (40%), Gaps = 49/309 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y+++EVIG G+ VV +AY EKVAIK+IN + + + HP+I
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-LEKCQTSMDELLKEIQAMSQCHHPNI 70
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDD-----LTPEHYQFFLYQL 135
V + ++++V +L+ D+ + I A + L L ++
Sbjct: 71 VSYYTSFVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI----FWTDYVA 191
L GL+Y+H HRD+K NIL D ++I DFG++ AF T I +V
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS--AFLATGGDITRNKVRKTFVG 183
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKP---LFPGKNVVHQLDIMTDLLG 248
T + APE+ Y DIWS G EL TG +P V +M L
Sbjct: 184 TPCWMAPEVMEQ-VRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-----LMLTLQN 237
Query: 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE 308
P E ++Y S RK ++ L +P+ RPTA
Sbjct: 238 DPPSLETGVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAA 278
Query: 309 EALADPYFK 317
E L +F+
Sbjct: 279 ELLRHKFFQ 287
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV---SDATXXXXXXXXXXXXXH 81
+K +++G+GS+ A + T + AIK + H+ + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEK--RHIIKENKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
P V++ + F Y +L + I+ +F+ +++ L+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N D ++I DFG A+V ++ A +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ D+W++GCI +L+ G P F N
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 41/229 (17%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDA 66
FT E SR IE++IG G G VC G++ VAIK + + + +S+A
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTP 125
+ HP+I+ ++ ++ + +V E ME+ L ++ +D
Sbjct: 102 SIMGQFD-------HPNIIRLEGVVT-----RGRLAMIVTEYMENGSLDTFLRTHDG--- 146
Query: 126 EHYQFFLYQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178
QF + QL+ G++Y+ HRDL +N+L +++ K+ DFGL+RV
Sbjct: 147 ---QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-LE 202
Query: 179 DTPTAIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
D P A + T + RW APE F ++ A D+WS G + E+L
Sbjct: 203 DDPDAAYTTTGGKIPIRW-TAPEAIA--FRTFSSASDVWSFGVVMWEVL 248
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 22/224 (9%)
Query: 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXX---XXXXX 75
Y + ++IE+ IG+G + V A G VA+KK+ IF+ + DA
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ-IFD-LMDAKARADCIKEIDL 85
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIK---ANDDLTPEH--YQ 129
HP++++ + E ++ +V EL ++ DL ++IK L PE ++
Sbjct: 86 LKQLNHPNVIKYYASFI-----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY 189
+F+ QL L+++H+ V HRD+KP N+ A +K+ D GL R + T A
Sbjct: 141 YFV-QLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---HSL 196
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233
V T +Y +PE + Y DIWS+GC+ E+ + F G
Sbjct: 197 VGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 43/225 (19%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDATXXXXXX 73
S KIEEVIG G +G VC G+K VAIK + + E +S+A+
Sbjct: 16 SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE 75
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFL 132
HP+I+ ++ ++ + ++ E ME+ L ++ ND QF +
Sbjct: 76 -------HPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLRLNDG------QFTV 117
Query: 133 YQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV----AFNDTP 181
QL+ G++Y+ + HRDL +NIL N++ K+ DFGL+R + + T
Sbjct: 118 IQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
T+ + RW APE F K+T A D WS G + E+++
Sbjct: 178 TSSL-GGKIPIRW-TAPEAIA--FRKFTSASDAWSYGIVMWEVMS 218
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 15/215 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDA-TXXXXXXXXXXXXXHP 82
+++ +++GKGS+G V A +T + AIK + D+ D HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+ H+ +E +++ V E + DL I++ F+ +++ GL++
Sbjct: 80 FLT---HMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 134
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARV-AFNDTPTAIFWTDYVATRWYRAPEL 200
+H+ + +RDLK NIL + D +KI DFG+ + D T ++ T Y APE+
Sbjct: 135 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT----NEFCGTPDYIAPEI 190
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
KY ++D WS G + E+L G+ F G++
Sbjct: 191 LLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN---DIFEHVSDATXXXXXXXXXX 77
+ RY + IG G++GV D T E VA+K I I E+V
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ------REIINHR 71
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLL 136
HP+IV K ++L P+ + ++ E +L++ I + + +FF QLL
Sbjct: 72 SLRHPNIVRFKEVILTPTH-----LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLL 126
Query: 137 RGLKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA-FNDTPTAIFWTDYVATR 193
G+ Y H+ + HRDLK +N L + +LKICDFG ++ + + P + V T
Sbjct: 127 SGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTP 181
Query: 194 WYRAPELCGSFFSKYTPAI-DIWSIGCIFAELLTG 227
Y APE+ +Y I D+WS G +L G
Sbjct: 182 AYIAPEVL--LRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 127/320 (39%), Gaps = 56/320 (17%)
Query: 10 SADVDFFTE--------YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE 61
S+ VD TE + +G Y ++E IG GSY T + A+K I+
Sbjct: 8 SSGVDLGTENLYFQSMVFSDG--YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK--- 62
Query: 62 HVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAN 120
S HP+I+ +K + + K +Y+V ELM +L I
Sbjct: 63 --SKRDPSEEIEILLRYGQHPNIITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQ 115
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL-----ANADCKLKICDFGLARV 175
+ F L+ + + ++Y+H+ V HRDLKP NIL N +C L+ICDFG A+
Sbjct: 116 KFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAK- 173
Query: 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
+ Y A + APE+ Y DIWS+G + +L G F
Sbjct: 174 QLRAENGLLMTPCYTAN--FVAPEVLKR--QGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
Query: 236 VVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLER 295
+ +PE I L+ + K + + A L+ +
Sbjct: 230 -------------SDTPEEI-----------LTRIGSGKFTLSGGNWNTVSETAKDLVSK 265
Query: 296 MLAFEPKDRPTAEEALADPY 315
ML +P R TA++ L P+
Sbjct: 266 MLHVDPHQRLTAKQVLQHPW 285
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 118/297 (39%), Gaps = 46/297 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y ++E IG GSY T + A+K I+ S HP+I
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDK-----SKRDPSEEIEILLRYGQHPNI 83
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
+ +K + + K +Y+V ELM +L I + F L+ + + ++Y+H
Sbjct: 84 ITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 144 TANVFHRDLKPKNIL-----ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
+ V HRDLKP NIL N +C L+ICDFG A+ + Y A + AP
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAK-QLRAENGLLMTPCYTAN--FVAP 194
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258
E+ Y DIWS+G + +L G F + +PE I
Sbjct: 195 EVLKR--QGYDEGCDIWSLGILLYTMLAGYTPFANGP-------------SDTPEEI--- 236
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
L+ + K + + A L+ +ML +P R TA++ L P+
Sbjct: 237 --------LTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 128/294 (43%), Gaps = 57/294 (19%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
++EEV+G+G++GVVC A + VAIK+I E S+ HP+IV
Sbjct: 12 EVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIV 65
Query: 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDL---TPEHYQFFLYQLLRGLKY 141
++ L P + +V E E L+ V+ + L T H + Q +G+ Y
Sbjct: 66 KLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 118
Query: 142 IHTAN---VFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
+H+ + HRDLKP N+L A LKICDFG A D T + T+ + + A
Sbjct: 119 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM--TNNKGSAAWMA 172
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257
PE+ S Y+ D++S G I E++T + F D +G P
Sbjct: 173 PEVFEG--SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGP------- 210
Query: 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311
A R + ++ P + P P+ L+ R + +P RP+ EE +
Sbjct: 211 -----AFRIMWAVHNGTRPPLIKNLP--KPIE-SLMTRCWSKDPSQRPSMEEIV 256
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 94/217 (43%), Gaps = 14/217 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXH 81
Y + + +G G++G V TG KVA+K +N + H
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLK 140
P I+++ ++ P+ D ++V E + +L I + + + Q+L +
Sbjct: 71 PHIIKLYQVISTPT-----DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A KI DFGL+ N F + Y APE
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS----NMMSDGEFLRTSCGSPNYAAPEV 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV 236
+ G ++ P +DIWS G I LL G F ++V
Sbjct: 182 ISGRLYA--GPEVDIWSCGVILYALLCGTLPFDDEHV 216
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 57/294 (19%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
++EEV+G+G++GVVC A + VAIK+I E S+ HP+IV
Sbjct: 11 EVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVNHPNIV 64
Query: 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDL---TPEHYQFFLYQLLRGLKY 141
++ L P + +V E E L+ V+ + L T H + Q +G+ Y
Sbjct: 65 KLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAY 117
Query: 142 IHTAN---VFHRDLKPKNILANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
+H+ + HRDLKP N+L A LKICDFG A D T + T+ + + A
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM--TNNKGSAAWMA 171
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257
PE+ S Y+ D++S G I E++T + F D +G P+ +
Sbjct: 172 PEVFEG--SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPAFRIMWA 216
Query: 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311
V N +P P + P P+ L+ R + +P RP+ EE +
Sbjct: 217 VHN-----------GTRP-PLIKNLP--KPIE-SLMTRCWSKDPSQRPSMEEIV 255
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
+ RY++ + IG G++GV D ++ E VA+K I A
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLR 73
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP+IV K ++L P+ + +V E +L + I + + +FF QL+ G+
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA-FNDTPTAIFWTDYVATRWYR 196
Y H V HRDLK +N L + +LKICDFG ++ + + P + V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAELLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 125/308 (40%), Gaps = 57/308 (18%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD----ATXXXXXXXXXXXXX 80
Y++ EVIGKG + VV + TG++ A+K I D+ + S
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME-SDL-HQVIKAND------DLTPEHYQFFL 132
HP IVE L + +Y+VFE M+ +DL +++K D + HY +
Sbjct: 85 HPHIVE-----LLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY---M 136
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDY 189
Q+L L+Y H N+ HRD+KP +L + +K+ FG VA + +
Sbjct: 137 RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFG---VAIQLGESGLVAGGR 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249
V T + APE+ Y +D+W G I LL+G F G
Sbjct: 194 VGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPFYGTK-------------- 237
Query: 250 PSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEE 309
R + K K +++ + + A L+ RML +P +R T E
Sbjct: 238 --------------ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283
Query: 310 ALADPYFK 317
AL P+ K
Sbjct: 284 ALNHPWLK 291
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 28 EEVIGKGSYG-VVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
++VIG G +G V T +G+K VAIK + + H +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHN 107
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRG---- 138
I+ ++ ++ ++K + ++ E ME+ L + ++ D E L +LRG
Sbjct: 108 IIRLEGVI-----SKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAG 159
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD--YVATRWYR 196
+KY+ N HRDL +NIL N++ K+ DFGL+RV D P A + T + RW
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV-LEDDPEATYTTSGGKIPIRW-T 217
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLT 226
APE + K+T A D+WS G + E++T
Sbjct: 218 APEAIS--YRKFTSASDVWSFGIVMWEVMT 245
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 105/228 (46%), Gaps = 39/228 (17%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIF------EHVSDA 66
FT E SR IE++IG G G VC G++ VAIK + + + +S+A
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEA 101
Query: 67 TXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTP 125
+ HP+I+ ++ ++ + +V E ME+ L ++ +D
Sbjct: 102 SIMGQFD-------HPNIIRLEGVVT-----RGRLAMIVTEYMENGSLDTFLRTHDG--- 146
Query: 126 EHYQFFLYQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178
QF + QL+ G++Y+ HRDL +N+L +++ K+ DFGL+RV +
Sbjct: 147 ---QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203
Query: 179 DTPTAIFWT-DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
D A T + RW APE F ++ A D+WS G + E+L
Sbjct: 204 DPDAAXTTTGGKIPIRW-TAPEAIA--FRTFSSASDVWSFGVVMWEVL 248
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKIN-DIF---EHVSDATXXXXXXXXXXXXXHPDIVE 86
+G+GS+G V D +TG + A+KK+ ++F E V+ A P IV
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS-----------PRIVP 114
Query: 87 IKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
+ + RE + + EL+E L Q+IK L + ++L Q L GL+Y+HT
Sbjct: 115 LYGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 146 NVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDT-PTAIFWTDYV-ATRWYRAPELCG 202
+ H D+K N+L ++D + +CDFG A D ++ DY+ T + APE+
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-- 227
Query: 203 SFFSKYTPA-IDIWSIGCIFAELLTG 227
K A +DIWS C+ +L G
Sbjct: 228 -VMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 7 KKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHV 63
+ S+ V F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 17 RGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE- 75
Query: 64 SDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND- 121
HP+I+ ++ ++ K + +V E ME+ L ++ +D
Sbjct: 76 KQRRDFLGEASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDA 130
Query: 122 DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181
T L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P
Sbjct: 131 QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDP 189
Query: 182 TAIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
A + T + RW +PE + K+T A D+WS G + E+++
Sbjct: 190 EAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 233
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKIN-DIF---EHVSDATXXXXXXXXXXXXXHPDIVE 86
+G+GS+G V D +TG + A+KK+ ++F E V+ A P IV
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS-----------PRIVP 130
Query: 87 IKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
+ + RE + + EL+E L Q+IK L + ++L Q L GL+Y+HT
Sbjct: 131 LYGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 185
Query: 146 NVFHRDLKPKNILANAD-CKLKICDFGLARVAFND-TPTAIFWTDYV-ATRWYRAPELCG 202
+ H D+K N+L ++D + +CDFG A D ++ DY+ T + APE+
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-- 243
Query: 203 SFFSKYTPA-IDIWSIGCIFAELLTG 227
K A +DIWS C+ +L G
Sbjct: 244 -VMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V D RT + VAIK I D+ E + P + +
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
L ++ ++++ E + + L L ++L+GL Y+H+
Sbjct: 87 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 141
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAY 196
Query: 209 TPAIDIWSIGCIFAELLTGKP 229
DIWS+G EL G+P
Sbjct: 197 DSKADIWSLGITAIELARGEP 217
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 36/279 (12%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN------------------------D 58
++Y +++ IGKGSYGVV AY+ A+K ++
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 59 IFEHVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIK 118
+ HP++V++ +L P+ +Y+VFEL+ +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDH---LYMVFELVNQGPVMEVP 129
Query: 119 ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178
L+ + +F+ L++G++Y+H + HRD+KP N+L D +KI DFG++ F
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN-EFK 188
Query: 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYT-PAIDIWSIGCIFAELLTGK-PLFPGKNV 236
+ + ++ V T + APE ++ A+D+W++G + G+ P + +
Sbjct: 189 GSDALL--SNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKP 275
I + L P IA E + ++ M K P
Sbjct: 247 CLHSKIKSQALEFPDQPDIA----EDLKDLITRMLDKNP 281
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 26/215 (12%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN---DIFEHVSDATXXXXXXXXXX 77
+ RY++ + IG G++GV D ++ E VA+K I I E+V
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHR 69
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLL 136
HP+IV K ++L P+ + +V E +L + I + + +FF QL+
Sbjct: 70 SLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI 124
Query: 137 RGLKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA-FNDTPTAIFWTDYVATR 193
G+ Y H V HRDLK +N L + +LKICDFG ++ + + P + V T
Sbjct: 125 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTP 179
Query: 194 WYRAPELCGSFFSKYTPAI-DIWSIGCIFAELLTG 227
Y APE+ +Y + D+WS G +L G
Sbjct: 180 AYIAPEVL--LKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 28/206 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKIN-DIF---EHVSDATXXXXXXXXXXXXXHPDIVE 86
+G+GS+G V D +TG + A+KK+ ++F E V+ A P IV
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSS-----------PRIVP 128
Query: 87 IKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
+ + RE + + EL+E L Q+IK L + ++L Q L GL+Y+HT
Sbjct: 129 LYGAV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 183
Query: 146 NVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDT-PTAIFWTDYV-ATRWYRAPELCG 202
+ H D+K N+L ++D + +CDFG A D ++ DY+ T + APE+
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV-- 241
Query: 203 SFFSKYTPA-IDIWSIGCIFAELLTG 227
K A +DIWS C+ +L G
Sbjct: 242 -VMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGLARV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 124/298 (41%), Gaps = 63/298 (21%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
KI +V G GS+ SA + + + +K++ DI VS HP+I+
Sbjct: 48 KIIDVTGGGSF----SAEEVQELREATLKEV-DILRKVSG---------------HPNII 87
Query: 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT 144
++K + ++VF+LM+ +L + L+ + + + LL + +H
Sbjct: 88 QLK-----DTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
N+ HRDLKP+NIL + D +K+ DFG + + T Y APE+
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFS----CQLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 205 FSKYTPA----IDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTPSPEAIARVR 259
+ P +D+WS G I LL G P F + + L IM+ SPE
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------ 252
Query: 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+ + + L+ R L +P+ R TAEEALA P+F+
Sbjct: 253 ----------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V D RT + VAIK I D+ E + P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
L ++ ++++ E + + L L ++L+GL Y+H+
Sbjct: 72 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 126
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAY 181
Query: 209 TPAIDIWSIGCIFAELLTGKP 229
DIWS+G EL G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 128/299 (42%), Gaps = 65/299 (21%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
KI +V G GS+ SA + + + +K++ DI VS HP+I+
Sbjct: 48 KIIDVTGGGSF----SAEEVQELREATLKEV-DILRKVSG---------------HPNII 87
Query: 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT 144
++K + ++VF+LM+ +L + L+ + + + LL + +H
Sbjct: 88 QLK-----DTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
N+ HRDLKP+NIL + D +K+ DFG + ++ + ++ T Y APE+
Sbjct: 143 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV-----CGTPSYLAPEIIEC 197
Query: 204 FFSKYTPA----IDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTPSPEAIARV 258
+ P +D+WS G I LL G P F + + L IM+ SPE
Sbjct: 198 SMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE----- 252
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+ + + L+ R L +P+ R TAEEALA P+F+
Sbjct: 253 -----------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 9 SSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSD 65
S+ V F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQ 60
Query: 66 ATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DL 123
HP+I+ ++ ++ K + +V E ME+ L ++ +D
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEXMENGSLDSFLRKHDAQF 115
Query: 124 TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183
T L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEA 174
Query: 184 IFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ T + RW +PE + K+T A D+WS G + E+++
Sbjct: 175 AYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V D RT + VAIK I D+ E + P + +
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
L ++ ++++ E + + L L ++L+GL Y+H+
Sbjct: 72 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 126
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAY 181
Query: 209 TPAIDIWSIGCIFAELLTGKP 229
DIWS+G EL G+P
Sbjct: 182 DSKADIWSLGITAIELARGEP 202
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 17/225 (7%)
Query: 9 SSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSD 65
S+ V F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 2 STQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQ 60
Query: 66 ATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DL 123
HP+I+ ++ ++ K + +V E ME+ L ++ +D
Sbjct: 61 RRDFLGEASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQF 115
Query: 124 TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183
T L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEA 174
Query: 184 IFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ T + RW +PE + K+T A D+WS G + E+++
Sbjct: 175 AYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ + K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVV-----TKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 11/201 (5%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V D RT + VAIK I D+ E + P + +
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
L ++ ++++ E + + L L ++L+GL Y+H+
Sbjct: 92 GSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKI 146
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRD+K N+L + ++K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIKQ--SAY 201
Query: 209 TPAIDIWSIGCIFAELLTGKP 229
DIWS+G EL G+P
Sbjct: 202 DSKADIWSLGITAIELARGEP 222
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 126/298 (42%), Gaps = 63/298 (21%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
KI +V G GS+ SA + + + +K++ DI VS HP+I+
Sbjct: 35 KIIDVTGGGSF----SAEEVQELREATLKEV-DILRKVSG---------------HPNII 74
Query: 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT 144
++K + ++VF+LM+ +L + L+ + + + LL + +H
Sbjct: 75 QLKD-----TYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
N+ HRDLKP+NIL + D +K+ DFG + D + + T Y APE+
Sbjct: 130 LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKL--REVCGTPSYLAPEIIECS 185
Query: 205 FSKYTPA----IDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTPSPEAIARVR 259
+ P +D+WS G I LL G P F + + L IM+ SPE
Sbjct: 186 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE------ 239
Query: 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+ + + L+ R L +P+ R TAEEALA P+F+
Sbjct: 240 ----------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 67
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLY-- 133
H +IV+ K + RR K ++ L L ++A+ + +H + Y
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTS 124
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 185 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 15/215 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDA-TXXXXXXXXXXXXXHP 82
+ + +++GKGS+G V A +T + AIK + D+ D HP
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+ H+ +E +++ V E + DL I++ F+ +++ GL++
Sbjct: 79 FLT---HMFCTFQTKE--NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARV-AFNDTPTAIFWTDYVATRWYRAPEL 200
+H+ + +RDLK NIL + D +KI DFG+ + D T F T Y APE+
Sbjct: 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF----CGTPDYIAPEI 189
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
KY ++D WS G + E+L G+ F G++
Sbjct: 190 LLG--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 222
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND----IFEHVSDATXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K ++ + + + A
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
P IV + + P + F + +LM DLH + + + +F+ +++ GL
Sbjct: 250 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + ++I D GLA P A V T Y APE
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 359
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAIA 256
+ + Y + D +S+GC+ +LL G F H++D MT + P++ +
Sbjct: 360 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 417
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND----IFEHVSDATXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K ++ + + + A
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
P IV + + P + F + +LM DLH + + + +F+ +++ GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + ++I D GLA P A V T Y APE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 360
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAIA 256
+ + Y + D +S+GC+ +LL G F H++D MT + P++ +
Sbjct: 361 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 35/213 (16%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
+GKG++G V YD TGE VA+KK+ + EH+ D H +IV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQHDNIV 77
Query: 86 EIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLY--QLLRGLKYI 142
+ K + RR K ++ E + L + ++ + + +H + Y Q+ +G++Y+
Sbjct: 78 KYKGVCYSAGRRNLK---LIMEFLPYGSLREYLQKHKERI-DHIKLLQYTSQICKGMEYL 133
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAIFWTDYVATR 193
T HRDL +NIL + ++KI DFGL +V D + IFW
Sbjct: 134 GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY------ 187
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
APE SK++ A D+WS G + EL T
Sbjct: 188 ---APESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND----IFEHVSDATXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K ++ + + + A
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
P IV + + P + F + +LM DLH + + + +F+ +++ GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + ++I D GLA P A V T Y APE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 360
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAIA 256
+ + Y + D +S+GC+ +LL G F H++D MT + P++ +
Sbjct: 361 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 18/239 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND----IFEHVSDATXXXXXXXXXXXXX 80
+ + +IG+G +G V TG+ A+K ++ + + + A
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
P IV + + P + F + +LM DLH + + + +F+ +++ GL
Sbjct: 251 CPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+++H V +RDLKP NIL + ++I D GLA P A V T Y APE
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA-----SVGTHGYMAPE 360
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAIA 256
+ + Y + D +S+GC+ +LL G F H++D MT + P++ +
Sbjct: 361 VLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFS 418
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ + K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVV-----TKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 23/221 (10%)
Query: 13 VDFFTEYGEGSRYKIEEV-IGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXX 70
VD+ EY E + ++ +G+GS+G V D +TG + A+KK+ ++F
Sbjct: 84 VDY--EYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR--------A 133
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
P IV + + RE + + EL+E L Q++K L +
Sbjct: 134 EELMACAGLTSPRIVPLYGAV-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL 188
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDT-PTAIFWT 187
++L Q L GL+Y+H+ + H D+K N+L ++D +CDFG A D ++
Sbjct: 189 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTG 248
Query: 188 DYV-ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
DY+ T + APE+ +D+WS C+ +L G
Sbjct: 249 DYIPGTETHMAPEVV--LGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN---DIFEHVSDATXXXXXXXXXX 77
+ RY++ + IG G++GV D ++ E VA+K I I E+V
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHR 70
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLL 136
HP+IV K ++L P+ + +V E +L + I + + +FF QL+
Sbjct: 71 SLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI 125
Query: 137 RGLKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA-FNDTPTAIFWTDYVATR 193
G+ Y H V HRDLK +N L + +LKIC FG ++ + + P D V T
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-----KDTVGTP 180
Query: 194 WYRAPELCGSFFSKYTPAI-DIWSIGCIFAELLTG 227
Y APE+ +Y + D+WS G +L G
Sbjct: 181 AYIAPEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 15/215 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDA-TXXXXXXXXXXXXXHP 82
++ V+GKGS+G V A TG+ A+K + D+ D HP
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHP 84
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+ ++ P R ++ V E + DL I+ + +F+ +++ L +
Sbjct: 85 FLTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAF-NDTPTAIFWTDYVATRWYRAPEL 200
+H + +RDLK N+L + + K+ DFG+ + N TA F T Y APE+
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATF----CGTPDYIAPEI 195
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
Y PA+D W++G + E+L G F +N
Sbjct: 196 LQEML--YGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 17/233 (7%)
Query: 1 MQPDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKIN 57
+ P + + V F + + + I++V+G G +G VCS +K VAIK +
Sbjct: 23 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 82
Query: 58 DIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV 116
+ HP+I+ ++ ++ K + +V E ME+ L
Sbjct: 83 VGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSF 136
Query: 117 IKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175
++ +D T L + G+KY+ HRDL +NIL N++ K+ DFGL+RV
Sbjct: 137 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 176 AFNDTPTAIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
D P A + T + RW +PE + K+T A D+WS G + E+++
Sbjct: 197 -LEDDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL+RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 106/233 (45%), Gaps = 17/233 (7%)
Query: 1 MQPDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKIN 57
+ P + + V F + + + I++V+G G +G VCS +K VAIK +
Sbjct: 21 VDPHTYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK 80
Query: 58 DIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV 116
+ HP+I+ ++ ++ + K + +V E ME+ L
Sbjct: 81 VGYTE-KQRRDFLGEASIMGQFDHPNIIRLEGVV-----TKSKPVMIVTEYMENGSLDSF 134
Query: 117 IKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175
++ +D T L + G+KY+ HRDL +NIL N++ K+ DFGL+RV
Sbjct: 135 LRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 194
Query: 176 AFNDTPTAIFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
D P A + T + RW +PE + K+T A D+WS G + E+++
Sbjct: 195 -LEDDPEAAYTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 92/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 66 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 180 REFHAEP-VDVWSCGIVLTAMLAGE 203
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 95
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 152
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 153 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 212
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 213 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 243
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEK---VAIKKINDIFEHVSDATXXXXX 72
F + + + I++V+G G +G VCS +K VAIK + +
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 XXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQF 130
HP+I+ ++ ++ K + +V E ME+ L ++ +D T
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKS-----KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT--D 188
L + G+KY+ HRDL +NIL N++ K+ DFGL RV D P A + T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV-LEDDPEAAYTTRGG 210
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ RW +PE + K+T A D+WS G + E+++
Sbjct: 211 KIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 12 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 68
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 125
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 126 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 185
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 186 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 13 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 69
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 126
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 127 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 186
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 187 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 99/217 (45%), Gaps = 17/217 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E++G G +G V +T TG K+A K I + D H ++++
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLDHANLIQ-- 150
Query: 89 HILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
L + DI +V E ++ ++I + +LT F+ Q+ G++++H
Sbjct: 151 ---LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 147 VFHRDLKPKNIL-ANADCK-LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
+ H DLKP+NIL N D K +KI DFGLAR P ++ T + APE+
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRY---KPREKLKVNF-GTPEFLAPEVVNYD 263
Query: 205 FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
F + D+WS+G I LL+G F G N L+
Sbjct: 264 FVSFPT--DMWSVGVIAYMLLSGLSPFLGDNDAETLN 298
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 14 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 70
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 127
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 128 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 187
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 188 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 82
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 139
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 200 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 15 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 71
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 128
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 129 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 188
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 189 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 11 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 67
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D H + Y
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQY 122
Query: 134 --QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PT 182
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D +
Sbjct: 123 TSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGES 182
Query: 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
IFW APE SK++ A D+WS G + EL T
Sbjct: 183 PIFWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 6 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 62
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 119
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 120 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 179
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 180 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 7 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 63
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 120
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 121 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 180
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 181 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 211
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 64
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 121
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 182 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 26 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 82
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 139
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 140 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 199
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 200 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 230
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 148/363 (40%), Gaps = 58/363 (15%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 116
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 117 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 229
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 230 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 276
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 277 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEG 370
+ P+ KV + P E + ER KE++ + ++Y +K+ +
Sbjct: 320 MNHPWIMQSTKVPQTPLHTSRVLKE-DKERWEDVKEEMTSALATMRVDYEQIKIKKIEDA 378
Query: 371 SEP 373
S P
Sbjct: 379 SNP 381
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 64
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 121
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 181
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 182 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 21 EGSRYKIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXX 75
E K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEI 64
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLY 133
H +IV+ K + RR K I Y+ + + L + + D + Y
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---S 121
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAI 184
Q+ +G++Y+ T HRDL +NIL + ++KI DFGL +V D + I
Sbjct: 122 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI 181
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
FW APE SK++ A D+WS G + EL T
Sbjct: 182 FWY---------APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 123/302 (40%), Gaps = 54/302 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y+++E IG GSY V T + A+K I+ S HP+I
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDK-----SKRDPTEEIEILLRYGQHPNI 78
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
+ +K + + K +YVV ELM+ +L I + L+ + + ++Y+H
Sbjct: 79 ITLKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 144 TANVFHRDLKPKNILANADC----KLKICDFGLA---RVAFNDTPTAIFWTDYVATRWYR 196
V HRDLKP NIL + ++ICDFG A R T + ++V
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFV------ 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ Y A DIWS+G + +LTG P G + TP E +
Sbjct: 188 APEVLER--QGYDAACDIWSLGVLLYTMLTGYTPFANGPD------------DTPE-EIL 232
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNA-NPLALRLLERMLAFEPKDRPTAEEALADP 314
AR+ + K S + N+ + A L+ +ML +P R TA L P
Sbjct: 233 ARIGSGK-------------FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHP 279
Query: 315 YF 316
+
Sbjct: 280 WI 281
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 148/363 (40%), Gaps = 58/363 (15%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 122
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 123 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 235
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 236 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 282
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 283 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 325
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEG 370
+ P+ KV + P E + ER KE++ + ++Y +K+ +
Sbjct: 326 MNHPWIMQSTKVPQTPLHTSRVLKE-DKERWEDVKEEMTSALATMRVDYEQIKIKKIEDA 384
Query: 371 SEP 373
S P
Sbjct: 385 SNP 387
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 86
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 87 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 199
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 200 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 246
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 247 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 289
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 290 MNHPWIMQSTKVPQTP 305
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 131/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 70
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 71 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T+ T +Y
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTEPCYTPYY 183
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 184 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 230
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 231 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 273
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 274 MNHPWIMQSTKVPQTP 289
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 23/221 (10%)
Query: 13 VDFFTEYGEGSRYKIEEV-IGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXX 70
VD+ EY E + ++ +G+GS+G V D +TG + A+KK+ ++F
Sbjct: 65 VDY--EYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFR--------A 114
Query: 71 XXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQ 129
P IV + + RE + + EL+E L Q++K L +
Sbjct: 115 EELMACAGLTSPRIVPLYGAV-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRAL 169
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFWT- 187
++L Q L GL+Y+H+ + H D+K N+L ++D +CDFG A D T
Sbjct: 170 YYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTG 229
Query: 188 DYV-ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
DY+ T + APE+ +D+WS C+ +L G
Sbjct: 230 DYIPGTETHMAPEVV--LGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 148/363 (40%), Gaps = 58/363 (15%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 72
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 73 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 186 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 232
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 233 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 275
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEG 370
+ P+ KV + P E + ER KE++ + ++Y +K+ +
Sbjct: 276 MNHPWIMQSTKVPQTPLHTSRVLKE-DKERWEDVKEEMTSALATMRVDYEQIKIKKIEDA 334
Query: 371 SEP 373
S P
Sbjct: 335 SNP 337
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+YG V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y I E +G G++GVV + TG A K + + H SD HP +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
V + + ++ +++E M +V ++ ++ + ++ Q+ +GL ++
Sbjct: 111 VNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 165
Query: 143 HTANVFHRDLKPKNIL--ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
H N H DLKP+NI+ +LK+ DFGL A D ++ T T + APE+
Sbjct: 166 HENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVT--TGTAEFAAPEV 221
Query: 201 C-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
G YT D+WS+G + LL+G F G+N
Sbjct: 222 AEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGEN 254
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 78
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 79 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 191
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 192 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 238
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 239 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 281
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 282 MNHPWIMQSTKVPQTP 297
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 77
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 78 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 190
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 191 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 237
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 238 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 280
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 281 MNHPWIMQSTKVPQTP 296
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 95/208 (45%), Gaps = 24/208 (11%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G+GS+ + ++ + A+K I+ E A HP+IV++ +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRME----ANTQKEITALKLCEGHPNIVKLHEV 74
Query: 91 LLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFH 149
+ ++V EL+ +L + IK + + + +L+ + ++H V H
Sbjct: 75 F-----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 150 RDLKPKNIL---ANADCKLKICDFGLARVAFNDT---PTAIFWTDYVATRWYRAPELCGS 203
RDLKP+N+L N + ++KI DFG AR+ D T F T Y APEL
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF------TLHYAAPELLNQ 183
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
+ Y + D+WS+G I +L+G+ F
Sbjct: 184 --NGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 19/216 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y I E +G G++GVV + TG A K + + H SD HP +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
V + + ++ +++E M +V ++ ++ + ++ Q+ +GL ++
Sbjct: 217 VNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHM 271
Query: 143 HTANVFHRDLKPKNIL--ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
H N H DLKP+NI+ +LK+ DFGL A D ++ T T + APE+
Sbjct: 272 HENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVT--TGTAEFAAPEV 327
Query: 201 C-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
G YT D+WS+G + LL+G F G+N
Sbjct: 328 AEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGEN 360
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 76
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 77 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 189
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 190 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 236
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 237 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 279
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 280 MNHPWIMQSTKVPQTP 295
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN---DIFEHVSDATXXXXXXXXXX 77
+ RY++ + IG G++GV D ++ E VA+K I I E+V
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK------REIINHR 70
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLL 136
HP+IV K ++L P+ + +V E +L + I + + +FF QL+
Sbjct: 71 SLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI 125
Query: 137 RGLKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA-FNDTPTAIFWTDYVATR 193
G+ Y H V HRDLK +N L + +LKIC FG ++ + + P + V T
Sbjct: 126 SGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGTP 180
Query: 194 WYRAPELCGSFFSKYTPAI-DIWSIGCIFAELLTG 227
Y APE+ +Y + D+WS G +L G
Sbjct: 181 AYIAPEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IGKGS+G V D T E VAIK I D+ E + P I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIK-IIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 91 LLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHR 150
L ++ ++++ E + + L + L ++L+GL Y+H+ HR
Sbjct: 86 YLKSTK-----LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 151 DLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K N+L + +K+ DFG VA T T I +V T ++ APE+ S Y
Sbjct: 141 DIKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNXFVGTPFWMAPEVIKQ--SAYDF 195
Query: 211 AIDIWSIGCIFAELLTGKP 229
DIWS+G EL G+P
Sbjct: 196 KADIWSLGITAIELAKGEP 214
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 71
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 72 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 184
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 185 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 231
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 232 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 274
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 275 MNHPWIMQSTKVPQTP 290
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 70
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 71 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 183
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 184 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 230
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 231 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 273
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 274 MNHPWIMQSTKVPQTP 289
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 130/316 (41%), Gaps = 57/316 (18%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 72
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 73 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D+WS+G I LL G P F H L I SP
Sbjct: 186 VAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 232
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 233 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 275
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 276 MNHPWIMQSTKVPQTP 291
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 57/337 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+++E +G+G+ +V T + A+K + + D HP+I
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALK----VLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
+++K I P+ +I +V EL+ +L I + + Q+L + Y+H
Sbjct: 111 IKLKEIFETPT-----EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 144 TANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L D LKI DFGL+++ + + T Y APE+
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ----VLMKTVCGTPGYCAPEI 221
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259
Y P +D+WS+G I LL G +P +
Sbjct: 222 LRG--CAYGPEVDMWSVGIITYILLCGFEPFY---------------------------- 251
Query: 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALR---LLERMLAFEPKDRPTAEEALADPYF 316
+E+ +++ R+ + P + ++L L+ +++ +PK R T +AL P+
Sbjct: 252 DERGDQFM--FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
Query: 317 KG-LAKVEREPSAQPVTKMEFEFERRRITKEDVRELI 352
G A +AQ K++ EF RR K V+ ++
Sbjct: 310 TGKAANFVHMDTAQ--KKLQ-EFNARRKLKAAVKAVV 343
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 30/308 (9%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ E++G+G+Y V A + G++ A+K I H S + + +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGH-SRSRVFREVETLYQCQGNKN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFE-LMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+E+ +R Y+VFE L + I+ + + L ++
Sbjct: 73 ILELIEFFEDDTR-----FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 143 HTANVFHRDLKPKNILANADCK---LKICDFGLAR-VAFNDTPTAIF---WTDYVATRWY 195
HT + HRDLKP+NIL + K +KICDF L + N++ T I T + Y
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEY 187
Query: 196 RAPELCGSFFSK---YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
APE+ F + Y D+WS+G + +L+G P F G G
Sbjct: 188 MAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD--------CGWDRG 239
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
E + RV K + + + P + + + + A L+ ++L + K R +A + L
Sbjct: 240 E-VCRVCQNKLFESIQEGKYEFP---DKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQ 295
Query: 313 DPYFKGLA 320
P+ +G A
Sbjct: 296 HPWVQGQA 303
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 26 KIEEVIGKGSYGVV-CSAYD---TRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXX 80
K + +GKG++G V YD TGE VA+KK+ + EH+ D
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 70
Query: 81 HPDIVEIKHILLPPSRREFKDI--YVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
H +IV+ K + RR K I Y+ + + L + + D + Y Q+ +G
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT---SQICKG 127
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT---------PTAIFWTDY 189
++Y+ T HR+L +NIL + ++KI DFGL +V D + IFW
Sbjct: 128 MEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-- 185
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
APE SK++ A D+WS G + EL T
Sbjct: 186 -------APESLTE--SKFSVASDVWSFGVVLYELFT 213
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN---DIFEHVSDATXXXXXXXXXX 77
+ RY++ + IG G++GV D + E VA+K I I E+V
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK------REIINHR 70
Query: 78 XXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLL 136
HP+IV K ++L P+ + +V E +L + I + + +FF QL+
Sbjct: 71 SLRHPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLI 125
Query: 137 RGLKYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVA-FNDTPTAIFWTDYVATR 193
G+ Y H V HRDLK +N L + +LKI DFG ++ + + P + V T
Sbjct: 126 SGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VGTP 180
Query: 194 WYRAPELCGSFFSKYTPAI-DIWSIGCIFAELLTG 227
Y APE+ +Y + D+WS G +L G
Sbjct: 181 AYIAPEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 137/335 (40%), Gaps = 60/335 (17%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA----TXXXXXXXXXXXXX 80
Y I E +G G + +V + TG + A K I S
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP+I+ + + + D+ ++ EL+ +L + + L+ E F+ Q+L G+
Sbjct: 74 HPNIITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 140 KYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
Y+HT + H DLKP+NI L + + +K+ DFGLA ++ + + + T +
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEF 184
Query: 196 RAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
APE+ Y P D+WSIG I LL+G F LG
Sbjct: 185 VAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGDTKQ 224
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEAL 311
E +A N A Y F ++ F + LA + ++L E + R T +EAL
Sbjct: 225 ETLA---NITAVSY----------DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 312 ADPYFKGL----AKVEREPSAQPVTKMEFEFERRR 342
P+ + A V RE S + + ++ RRR
Sbjct: 272 RHPWITPVDTQQAMVRRE-SVVNLENFKKQYVRRR 305
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 11/208 (5%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
V+GKGS+G V A T E AIK + D+ D P +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 89 HILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
H R +Y V E + DL I+ F+ ++ GL ++H +
Sbjct: 86 HSCFQTVDR----LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGI 141
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RDLK N++ +++ +KI DFG+ + D T ++ T Y APE+ +
Sbjct: 142 IYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT---REFCGTPDYIAPEIIA--YQP 196
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN 235
Y ++D W+ G + E+L G+P F G++
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGED 224
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + E +LRGL Y+ + + HRD+KP NIL
Sbjct: 88 EISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNIL 147
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y APE L G+ +S + DIWS+
Sbjct: 148 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMAPERLQGTHYSVQS---DIWSM 199
Query: 218 GCIFAELLTGK 228
G EL G+
Sbjct: 200 GLSLVELAVGR 210
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 235 LLAGLLKKDP 244
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
E IGKGS+G V D RT + VAIK I D+ E + + +
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFF-----LYQLLRGLKYIH 143
L S+ ++++ E + A D L + F L ++L+GL Y+H
Sbjct: 88 GSYLKGSK-----LWIIMEYLGGG-----SALDLLRAGPFDEFQIATMLKEILKGLDYLH 137
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+K N+L + +K+ DFG VA T T I +V T ++ APE+
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFG---VAGQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKP 229
S Y DIWS+G EL G+P
Sbjct: 195 --SAYDSKADIWSLGITAIELAKGEP 218
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 75
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 76 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 131
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 186
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 187 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 239
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 240 LLAGLLKKDP 249
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 73
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 74 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 129
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLED--ND 184
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 185 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 237
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 238 LLAGLLKKDP 247
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 235 LLAGLLKKDP 244
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 235 LLAGLLKKDP 244
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 235 LLAGLLKKDP 244
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 112/250 (44%), Gaps = 19/250 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL 70
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
K+ R F Y +L + T E +F+ +++ L+Y+H+ +V
Sbjct: 71 KYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDV 126
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
+RD+K +N++ + D +KI DFGL + +D T + T Y APE+ +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVLED--ND 181
Query: 208 YTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
Y A+D W +G + E++ G+ F ++ + +L +M ++ R + +A+
Sbjct: 182 YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI-------RFPRTLSPEAKS 234
Query: 266 YLSSMRKKKP 275
L+ + KK P
Sbjct: 235 LLAGLLKKDP 244
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 44/217 (20%)
Query: 105 VFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK 164
+F L +L +++ ND + + Q+L G+ Y+H N+ H DLKP+NIL ++
Sbjct: 116 IFSLCLPELAEMVSENDVIR------LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP 169
Query: 165 L---KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
L KI DFG++R A + + T Y APE+ + T A D+W+IG I
Sbjct: 170 LGDIKIVDFGMSR----KIGHACELREIMGTPEYLAPEILN--YDPITTATDMWNIGIIA 223
Query: 222 AELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQK 281
LLT F G++ N++ +S + + +S++
Sbjct: 224 YMLLTHTSPFVGED------------------------NQETYLNISQVN----VDYSEE 255
Query: 282 -FPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
F + + LA ++ +L P+ RPTAE L+ + +
Sbjct: 256 TFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ + + +G+G+ G V A + T E VA+K I D+ V H ++
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V+ RRE Y+ E +L I+ + + Q F +QL+ G+ Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LKI DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 15/215 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +G GS+G V G A+K + +I + HP
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + ++ + I+++ + +E +L +++ + +F+ ++ L+Y+
Sbjct: 68 IIRMWGTF-----QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYL 122
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ ++ +RDLKP+NIL + + +KI DFG A+ + T DY+ APE+
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYI------APEVVS 176
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
+ Y +ID WS G + E+L G F N +
Sbjct: 177 T--KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM 209
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 127/313 (40%), Gaps = 61/313 (19%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA------TXXXXXXXXXXX 78
Y++ E +G G + +V TG++ A K I +S +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILRE 64
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+L
Sbjct: 65 IRHPNIITLHDIFENKT-----DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 138 GLKYIHTANVFHRDLKPKNIL---ANA-DCKLKICDFGLA-RVAFNDTPTAIFWTDYVAT 192
G+ Y+H+ + H DLKP+NI+ N + ++K+ DFG+A ++ + IF T
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT----- 174
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249
PE Y P D+WSIG I LL+G F LG
Sbjct: 175 -----PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGE 214
Query: 250 PSPEAIARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAE 308
E + + A Y F ++ F N + LA + R+L +PK R T
Sbjct: 215 TKQETLTNI---SAVNY----------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIA 261
Query: 309 EALADPYFKGLAK 321
++L + K + +
Sbjct: 262 QSLEHSWIKAIRR 274
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 118/293 (40%), Gaps = 44/293 (15%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G+G+YGVV +G+ +A+K+I P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 91 LLPPSRREFKDIYVVFELMESDL----HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA- 145
L RE D+++ ELM++ L QVI + + +++ L+++H+
Sbjct: 119 LF----RE-GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+V HRD+KP N+L NA ++K+CDFG++ + I + Y APE
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI----DAGCKPYMAPERINPEL 229
Query: 206 SK--YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
++ Y+ DIWS+G EL + FP + + ++ PSP+ A
Sbjct: 230 NQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPSPQLPAD------ 281
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
FS +F + + L K+RPT E + P+F
Sbjct: 282 -------------KFSAEF-------VDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
++V+G G G V + RTG+K A+K + D + + D+ E
Sbjct: 34 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYEN 93
Query: 88 KHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHT 144
H + + ++ E ME +L I+ D T + + ++++H+
Sbjct: 94 MH-------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 145 ANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
N+ HRD+KP+N+L + D LK+ DFG A+ + +T Y Y APE+
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPEVL 201
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
G KY + D+WS+G I LL G P F
Sbjct: 202 GP--EKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 142
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 201
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 202 PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 90/201 (44%), Gaps = 16/201 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G+G+YGVV +G+ +A+K+I P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 91 LLPPSRREFKDIYVVFELMESDL----HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA- 145
L RE D+++ ELM++ L QVI + + +++ L+++H+
Sbjct: 75 LF----RE-GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+V HRD+KP N+L NA ++K+CDFG++ +D I + Y APE
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI----DAGCKPYMAPERINPEL 185
Query: 206 SK--YTPAIDIWSIGCIFAEL 224
++ Y+ DIWS+G EL
Sbjct: 186 NQKGYSVKSDIWSLGITMIEL 206
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 22/250 (8%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXX-XXXXXHPDIVEIKH 89
IG GS+G V A D R E VAIKK++ + ++ HP+ ++ +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 90 ILLPPSRREFKDIYVVFELM---ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
L RE ++V E SDL +V K L + L+GL Y+H+ N
Sbjct: 122 CYL----RE-HTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN 174
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF-F 205
+ HRD+K NIL + +K+ DFG A + P F V T ++ APE+ +
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF----VGTPYWMAPEVILAMDE 227
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
+Y +D+WS+G EL KP N + L + SP + +E R
Sbjct: 228 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQNESPALQSGHWSEYFRN 284
Query: 266 YLSSMRKKKP 275
++ S +K P
Sbjct: 285 FVDSCLQKIP 294
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 125 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 179
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 238
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 239 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 32/237 (13%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 192
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 193 PDYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
++V+G G G V + RTG+K A+K + D + + D+ E
Sbjct: 15 KQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYEN 74
Query: 88 KHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHT 144
H + + ++ E ME +L I+ D T + + ++++H+
Sbjct: 75 MH-------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 145 ANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
N+ HRD+KP+N+L + D LK+ DFG A+ + +T Y Y APE+
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YVAPEVL 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
G KY + D+WS+G I LL G P F
Sbjct: 183 GP--EKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 16/236 (6%)
Query: 7 KKSSADVDFFTEYGEGSRYKIEE-----VIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIF 60
+K++ + F G R K+ + V+GKGS+G V + T E A+K + D+
Sbjct: 320 EKTANTISKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV 379
Query: 61 EHVSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKA 119
D P + H R +Y V E + DL I+
Sbjct: 380 IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR----LYFVMEYVNGGDLMYHIQQ 435
Query: 120 NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179
H F+ ++ GL ++ + + +RDLK N++ +++ +KI DFG+ + D
Sbjct: 436 VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495
Query: 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
T + T Y APE+ + Y ++D W+ G + E+L G+ F G++
Sbjct: 496 GVTT---KXFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 99/225 (44%), Gaps = 29/225 (12%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXX-XXXX 80
+ +EE+IG G +G V A+ G++VA+K +D E +S
Sbjct: 7 AELTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK 64
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLK 140
HP+I+ ++ + L ++ +V E + + + P+ + Q+ RG+
Sbjct: 65 HPNIIALRGVCLKEP-----NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMN 119
Query: 141 YIH---TANVFHRDLKPKNILA-----NADCK---LKICDFGLARVAFNDTPTAIFWTDY 189
Y+H + HRDLK NIL N D LKI DFGLAR T +
Sbjct: 120 YLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMS-----A 174
Query: 190 VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233
+ APE+ S FSK + D+WS G + ELLTG+ F G
Sbjct: 175 AGAYAWMAPEVIRASMFSKGS---DVWSYGVLLWELLTGEVPFRG 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 192
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 193 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 34/238 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 142
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 201
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 202 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ IG GS+G V TG A+K + D I++ +
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E M D+ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ IG GS+G V TG A+K + D I++ +
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E M D+ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 122/305 (40%), Gaps = 58/305 (19%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y I E +G G++GVV + TG K IN + D HP +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKL 110
Query: 85 VEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKAND-DLTPEHYQFFLYQLLRGL 139
+ + F+D Y + ++E +L I A D ++ ++ Q GL
Sbjct: 111 INL--------HDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 140 KYIHTANVFHRDLKPKNILANAD--CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
K++H ++ H D+KP+NI+ +KI DFGLA D + AT + A
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV----TTATAEFAA 218
Query: 198 PELCG----SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
PE+ F++ D+W+IG + LL+G F G++ + L +
Sbjct: 219 PEIVDREPVGFYT------DMWAIGVLGYVLLSGLSPFAGEDDLETL------------Q 260
Query: 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313
+ R E SS+ +P A ++ +L EP+ R T +AL
Sbjct: 261 NVKRCDWEFDEDAFSSV---------------SPEAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 314 PYFKG 318
P+ KG
Sbjct: 306 PWLKG 310
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 111/273 (40%), Gaps = 34/273 (12%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++++E +G G +G V TGE+VAIK+ + HP++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-KNRERWCLEIQIMKKLNHPNV 75
Query: 85 VEIKHILLPPSRREFKDI-YVVFELMES-DLHQVIKANDD---LTPEHYQFFLYQLLRGL 139
V + + + D+ + E E DL + + ++ L + L + L
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 140 KYIHTANVFHRDLKPKNILANADCKL---KICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
+Y+H + HRDLKP+NI+ + KI D G A+ + T++V T Y
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVH-----------QLDIMT 244
APEL KYT +D WS G + E +TG +P P V + +
Sbjct: 192 APELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 249
Query: 245 DLLGT-------PSPEAIARVRNEKARRYLSSM 270
DL G P+P ++ + K R+L M
Sbjct: 250 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM 282
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 111/273 (40%), Gaps = 34/273 (12%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++++E +G G +G V TGE+VAIK+ + HP++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-KNRERWCLEIQIMKKLNHPNV 74
Query: 85 VEIKHILLPPSRREFKDI-YVVFELMES-DLHQVIKANDD---LTPEHYQFFLYQLLRGL 139
V + + + D+ + E E DL + + ++ L + L + L
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 140 KYIHTANVFHRDLKPKNILANADCKL---KICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
+Y+H + HRDLKP+NI+ + KI D G A+ + T++V T Y
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVH-----------QLDIMT 244
APEL KYT +D WS G + E +TG +P P V + +
Sbjct: 191 APELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248
Query: 245 DLLGT-------PSPEAIARVRNEKARRYLSSM 270
DL G P+P ++ + K R+L M
Sbjct: 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM 281
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 109/250 (43%), Gaps = 22/250 (8%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXX-XXXXXHPDIVEIKH 89
IG GS+G V A D R E VAIKK++ + ++ HP+ ++ +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 90 ILLPPSRREFKDIYVVFELM---ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
L RE ++V E SDL +V K L + L+GL Y+H+ N
Sbjct: 83 CYL----RE-HTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF-F 205
+ HRD+K NIL + +K+ DFG A + P F V T ++ APE+ +
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF----VGTPYWMAPEVILAMDE 188
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
+Y +D+WS+G EL KP N + L + SP + +E R
Sbjct: 189 GQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL---YHIAQNESPALQSGHWSEYFRN 245
Query: 266 YLSSMRKKKP 275
++ S +K P
Sbjct: 246 FVDSCLQKIP 255
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG G +G+V Y +KVAIK I E HP +V++ +
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 91 LLPPSRREFKDIYVVFELMESD-LHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVF 148
L E I +VFE ME L ++ L E + G+ Y+ A+V
Sbjct: 71 CL-----EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVI 125
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRDL +N L + +K+ DFG+ R +D T+ T + +W +PE+ FS+Y
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKW-ASPEVFS--FSRY 181
Query: 209 TPAIDIWSIGCIFAELLT 226
+ D+WS G + E+ +
Sbjct: 182 SSKSDVWSFGVLMWEVFS 199
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 98/231 (42%), Gaps = 19/231 (8%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG+G+YG V +G+ +A+K+I + P IV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGA 89
Query: 91 LLPPSRREFKDIYVVFELMESDLHQ----VIKANDDLTPEH-YQFFLYQLLRGLKYI-HT 144
L RE D ++ ELM + + V DD+ PE ++ L ++
Sbjct: 90 LF----RE-GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
+ HRD+KP NIL + +K+CDFG++ + +I T R Y APE
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD----SIAKTRDAGCRPYMAPERIDPS 200
Query: 205 FSK--YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253
S+ Y D+WS+G EL TG+ +P N V D +T ++ P+
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--FDQLTQVVKGDPPQ 249
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 144/363 (39%), Gaps = 58/363 (15%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQC------PH 116
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T +
Sbjct: 117 IVRIVDVYENLYAGR---KCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+ +T + T T +Y
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----ETTSHNSLTTPCYTPYY 229
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE+ G KY + D WS+G I LL G P F H L I SP
Sbjct: 230 VAPEVLGP--EKYDKSCDXWSLGVIXYILLCGYPPFYSN---HGLAI--------SPGXK 276
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 277 TRIRXGQY-----------------EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEF 319
Query: 311 LADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEG 370
P+ KV + P E + ER KE+ + ++Y +K+ +
Sbjct: 320 XNHPWIXQSTKVPQTPLHTSRVLKE-DKERWEDVKEEXTSALATMRVDYEQIKIKKIEDA 378
Query: 371 SEP 373
S P
Sbjct: 379 SNP 381
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 12/179 (6%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 97 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 156
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 157 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 208
Query: 218 GCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKP 275
G E+ G+ P+ G + +++ ++ P P+ + V + + + +++ K P
Sbjct: 209 GLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 267
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 117/295 (39%), Gaps = 47/295 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + +R +Y++ E ++++ ++ + ++ +L L Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIE 184
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
+ +D+WS+G + E L GKP F +
Sbjct: 185 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 212
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
A Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 213 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD- 192
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 193 PDXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 133
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR D
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD- 192
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 193 PDXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 247
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIEG 185
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 186 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 213
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 214 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 89/195 (45%), Gaps = 43/195 (22%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND-------TPTAIFW 186
Q+ ++++H+ + HRDLKP NI D +K+ DFGL D TP +
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231
Query: 187 TDY--VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T V T+ Y +PE + Y+ +DI+S+G I EL L+ + ++ I+T
Sbjct: 232 THXGQVGTKLYMSPEQIHG--NNYSHKVDIFSLGLILFEL-----LYSFSTQMERVRIIT 284
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
D VRN K P+ F+QK+P + +++ ML+ P +R
Sbjct: 285 D------------VRNLKF-----------PLLFTQKYPQEH----MMVQDMLSPSPTER 317
Query: 305 PTAEEALADPYFKGL 319
P A + + + F+ L
Sbjct: 318 PEATDIIENAIFENL 332
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
Query: 22 GSRYKIEE-----VIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXX 75
GSR + E ++GKG++G V + TG A+K + ++ +
Sbjct: 2 GSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 61
Query: 76 XXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQL 135
HP + +K+ R F Y +L + + + +F+ ++
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEI 117
Query: 136 LRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194
+ L Y+H+ NV +RDLK +N++ + D +KI DFGL + D T + T
Sbjct: 118 VSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPE 174
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSP 252
Y APE+ + Y A+D W +G + E++ G+ F ++ + +L +M ++
Sbjct: 175 YLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI------ 226
Query: 253 EAIARVRNEKARRYLSSMRKKKP 275
R +A+ LS + KK P
Sbjct: 227 -RFPRTLGPEAKSLLSGLLKKDP 248
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 79/189 (41%), Gaps = 36/189 (19%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNIL--ANADCKLKICDFGLARVAFNDTPTAIF-WTDYV 190
Q+ L Y+H + HRD+KP+N L N ++K+ DFGL++ + + T
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKA 235
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250
T ++ APE+ + Y P D WS G + LL G FPG N
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN--------------- 280
Query: 251 SPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNAN---PLALRLLERMLAFEPKDRPTA 307
+ I++V N+K + F PN N PLA LL +L +R A
Sbjct: 281 DADTISQVLNKK-------------LCFEN--PNYNVLSPLARDLLSNLLNRNVDERFDA 325
Query: 308 EEALADPYF 316
AL P+
Sbjct: 326 MRALQHPWI 334
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN 57
+Y ++ IG+GSYGVV A + +T AIK +N
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMN 60
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 126/304 (41%), Gaps = 29/304 (9%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
E+V+G+G++ V + + T ++ A+K I H+ + H +++E+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEMLYQCQGHRNVLEL 76
Query: 88 KHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
R Y+VFE M + I + + L ++H
Sbjct: 77 IEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 147 VFHRDLKPKNILA---NADCKLKICDFGLAR-VAFNDTPTAIFWTDYV---ATRWYRAPE 199
+ HRDLKP+NIL N +KICDFGL + N + I + + + Y APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 200 LCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
+ +F S Y D+WS+G I LL+G P F G+ G EA
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR--------CGSDCGWDRGEACP 243
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+N S+++ K + + + + A L+ ++L + K R +A + L P+
Sbjct: 244 ACQN----MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Query: 317 KGLA 320
+G A
Sbjct: 300 QGCA 303
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 36/233 (15%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ + +G G +G V Y + KVA+K + H +V
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNS-TKVAVKTLK---PGTMSVQAFLEEANLMKTLQHDKLV 71
Query: 86 EIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDD---LTPEHYQFFLYQLLRGLKY 141
+ ++ +R E IY++ E M + L +K+++ L P+ F Q+ G+ Y
Sbjct: 72 RLYAVV---TREE--PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA-QIAEGMAY 125
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRW 194
I N HRDL+ N+L + KI DFGLARV ++ TA I WT
Sbjct: 126 IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT------- 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246
APE F +T D+WS G + E++T GK +PG+ D+MT L
Sbjct: 179 --APEAIN--FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT---NADVMTAL 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++ +E +G G++ V A + TG+ A+K I +++ H +I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK-HENI 82
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
V ++ I P+ +Y+V +L+ +L I T + + Q+L + Y+H
Sbjct: 83 VALEDIYESPNH-----LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 144 TANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + + K+ I DFGL+++ + T Y APE+
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM----EGKGDVMSTACGTPGYVAPEV 193
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
Y+ A+D WSIG I LL G P F +N
Sbjct: 194 LAQ--KPYSKAVDCWSIGVIAYILLCGYPPFYDEN 226
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V +++ DL++
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK----- 142
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR D
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD- 201
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 202 PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + TD T Y PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TDLCGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 116/305 (38%), Gaps = 67/305 (21%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R ELCG+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRTELCGT 169
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L GKP F
Sbjct: 170 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 206
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + ++ + F+ FP+ R L+ R+L P RP E L
Sbjct: 207 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
Query: 312 ADPYF 316
P+
Sbjct: 256 EHPWI 260
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 151
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 206
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 207 RM--HDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 234
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 235 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 117/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 126
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A P++ TD T Y PE+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-TDLCGTLDYLPPEMIEG 181
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 182 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 209
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 210 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG G +G+V Y +KVAIK I E HP +V++ +
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 70
Query: 91 LLPPSRREFKDIYVVFELMESD-LHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVF 148
L E I +VFE ME L ++ L E + G+ Y+ A V
Sbjct: 71 CL-----EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 125
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRDL +N L + +K+ DFG+ R +D T+ T + +W +PE+ FS+Y
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKW-ASPEVFS--FSRY 181
Query: 209 TPAIDIWSIGCIFAELLT 226
+ D+WS G + E+ +
Sbjct: 182 SSKSDVWSFGVLMWEVFS 199
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 29/182 (15%)
Query: 123 LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182
T Q ++ +++ L+++H + +RD+K +NIL +++ + + DFGL++ D
Sbjct: 156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE 215
Query: 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242
+ D+ T Y AP++ S + A+D WS+G + ELLTG
Sbjct: 216 RAY--DFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG--------------- 258
Query: 243 MTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK 302
SP + +N +A ++ + P P + LA L++R+L +PK
Sbjct: 259 -------ASPFTVDGEKNSQAEISRRILKSEPPYP-----QEMSALAKDLIQRLLMKDPK 306
Query: 303 DR 304
R
Sbjct: 307 KR 308
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG G +G+V Y +KVAIK I E HP +V++ +
Sbjct: 18 IGSGQFGLVHLGY-WLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 73
Query: 91 LLPPSRREFKDIYVVFELMESD-LHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVF 148
L E I +VFE ME L ++ L E + G+ Y+ A V
Sbjct: 74 CL-----EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 128
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRDL +N L + +K+ DFG+ R +D T+ T + +W +PE+ FS+Y
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKW-ASPEVFS--FSRY 184
Query: 209 TPAIDIWSIGCIFAELLT 226
+ D+WS G + E+ +
Sbjct: 185 SSKSDVWSFGVLMWEVFS 202
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 79 XXHPDIVEIKHILLPPS------------------RREFKDIYVVFELMESDLHQVIKAN 120
H ++V + P R ++ +V ++ DL++
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK----- 144
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 203
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 204 PDYVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 258
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 16/234 (6%)
Query: 9 SSADVDFFTEYGEGSRYKIEE-----VIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEH 62
++ V F G R K+ + V+GKGS+G V + T E A+K + D+
Sbjct: 1 TTNTVSKFDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQ 60
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND 121
D P + H R +Y V E + DL I+
Sbjct: 61 DDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR----LYFVMEYVNGGDLMYHIQQVG 116
Query: 122 DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181
H F+ ++ GL ++ + + +RDLK N++ +++ +KI DFG+ + D
Sbjct: 117 RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV 176
Query: 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235
T + T Y APE+ + Y ++D W+ G + E+L G+ F G++
Sbjct: 177 TT---KXFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 225
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG G +G+V Y +KVAIK I E HP +V++ +
Sbjct: 13 IGSGQFGLVHLGY-WLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 68
Query: 91 LLPPSRREFKDIYVVFELMESD-LHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVF 148
L E I +VFE ME L ++ L E + G+ Y+ A V
Sbjct: 69 CL-----EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRDL +N L + +K+ DFG+ R +D T+ T + +W +PE+ FS+Y
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKW-ASPEVFS--FSRY 179
Query: 209 TPAIDIWSIGCIFAELLT 226
+ D+WS G + E+ +
Sbjct: 180 SSKSDVWSFGVLMWEVFS 197
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 94/226 (41%), Gaps = 13/226 (5%)
Query: 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND--IFEHVSDATXXXXXXXXX 76
+ + S + +VIGKGS+G V A A+K + I + +
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQL 135
HP +V + S + +Y V + + +L ++ +F+ ++
Sbjct: 94 KNVKHPFLVGLHF-----SFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI 148
Query: 136 LRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
L Y+H+ N+ +RDLKP+NIL ++ + + DFGL + T + + T Y
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT---STFCGTPEY 205
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241
APE+ Y +D W +G + E+L G P F +N D
Sbjct: 206 LAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYD 249
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 119/299 (39%), Gaps = 55/299 (18%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 84 IVEIKHILLPPSRREFKDIYVVFEL-----MESDLHQVIKANDDLTPEHYQFFLYQLLRG 138
I+ + +R +Y++ E + +L ++ K ++ T ++ +L
Sbjct: 87 ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANA 137
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAP 198
L Y H+ V HRD+KP+N+L + +LKI DFG + A + T + T Y P
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPP 192
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258
E+ + +D+WS+G + E L GKP F
Sbjct: 193 EMIEG--RMHDEKVDLWSLGVLCYEFLVGKPPF--------------------------- 223
Query: 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
+A Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 224 ---EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 34 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 90
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 91 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 146
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 207 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 250
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 18/239 (7%)
Query: 1 MQPDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF 60
M D +S ++D +++ E++G G+YG V +TG+ AIK ++
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG 61
Query: 61 EHVSDATXXXXXXXXXXXXXHPDIVEIKHILL---PPSRREFKDIYVVFELME----SDL 113
+ + H +I + PP + +++V E +DL
Sbjct: 62 D--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD--QLWLVMEFCGAGSVTDL 117
Query: 114 HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173
+ K N L E + ++LRGL ++H V HRD+K +N+L + ++K+ DFG
Sbjct: 118 IKNTKGNT-LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG-- 174
Query: 174 RVAFNDTPTAIFWTDYVATRWYRAPELCG---SFFSKYTPAIDIWSIGCIFAELLTGKP 229
V+ T ++ T ++ APE+ + + Y D+WS+G E+ G P
Sbjct: 175 -VSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 216
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-AN 146
K+ R F Y +L + + + +F+ +++ L Y+H+ N
Sbjct: 217 KYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 272
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
V +RDLK +N++ + D +KI DFGL + D T + T Y APE+ +
Sbjct: 273 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEVLED--N 327
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKAR 264
Y A+D W +G + E++ G+ F ++ + +L +M ++ R +A+
Sbjct: 328 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRTLGPEAK 380
Query: 265 RYLSSMRKKKP 275
LS + KK P
Sbjct: 381 SLLSGLLKKDP 391
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI-L 158
D+ ++ EL+ +L + + L+ E F+ Q+L G+ Y+HT + H DLKP+NI L
Sbjct: 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 159 ANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP---AI 212
+ + +K+ DFGLA ++ + + + T + APE+ Y P
Sbjct: 149 LDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIVN-----YEPLGLEA 199
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WSIG I LL+G F LG E +A N A Y
Sbjct: 200 DMWSIGVITYILLSGASPF---------------LGDTKQETLA---NITAVSY------ 235
Query: 273 KKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
F ++ F + LA + ++L E + R T +EAL P+
Sbjct: 236 ----DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 213
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-AN 146
K+ R F Y +L + + + +F+ +++ L Y+H+ N
Sbjct: 214 KYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 269
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
V +RDLK +N++ + D +KI DFGL + D T + T Y APE+ +
Sbjct: 270 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEVLED--N 324
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKAR 264
Y A+D W +G + E++ G+ F ++ + +L +M ++ R +A+
Sbjct: 325 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRTLGPEAK 377
Query: 265 RYLSSMRKKKP 275
LS + KK P
Sbjct: 378 SLLSGLLKKDP 388
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI-L 158
D+ ++ EL+ +L + + L+ E F+ Q+L G+ Y+HT + H DLKP+NI L
Sbjct: 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 159 ANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP---AI 212
+ + +K+ DFGLA ++ + + + T + APE+ Y P
Sbjct: 149 LDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIVN-----YEPLGLEA 199
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WSIG I LL+G F LG E +A + +
Sbjct: 200 DMWSIGVITYILLSGASPF---------------LGDTKQETLANITS------------ 232
Query: 273 KKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
F ++ F + + LA + ++L E + R T +EAL P+
Sbjct: 233 -VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 86/198 (43%), Gaps = 15/198 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG G +G+V Y +KVAIK I E HP +V++ +
Sbjct: 35 IGSGQFGLVHLGY-WLNKDKVAIKTIK---EGSMSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 91 LLPPSRREFKDIYVVFELMESD-LHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVF 148
L E I +VFE ME L ++ L E + G+ Y+ A V
Sbjct: 91 CL-----EQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRDL +N L + +K+ DFG+ R +D T+ T + +W +PE+ FS+Y
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKW-ASPEVFS--FSRY 201
Query: 209 TPAIDIWSIGCIFAELLT 226
+ D+WS G + E+ +
Sbjct: 202 SSKSDVWSFGVLMWEVFS 219
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI-L 158
D+ ++ EL+ +L + + L+ E F+ Q+L G+ Y+HT + H DLKP+NI L
Sbjct: 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Query: 159 ANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP---AI 212
+ + +K+ DFGLA ++ + + + T + APE+ Y P
Sbjct: 149 LDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEFVAPEIVN-----YEPLGLEA 199
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WSIG I LL+G F LG E +A + +
Sbjct: 200 DMWSIGVITYILLSGASPF---------------LGDTKQETLANITS------------ 232
Query: 273 KKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
F ++ F + + LA + ++L E + R T +EAL P+
Sbjct: 233 -VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 53/251 (21%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+L G+
Sbjct: 88 HPNIITLHDIFENKT-----DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 140 KYIHTANVFHRDLKPKNIL---ANA-DCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRW 194
Y+H+ + H DLKP+NI+ N + ++K+ DFG+A ++ + IF T
Sbjct: 143 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT------- 195
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251
PE Y P D+WSIG I LL+G F LG
Sbjct: 196 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGETK 237
Query: 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEA 310
E + + A Y F ++ F N + LA + R+L +PK R ++
Sbjct: 238 QETLTNI---SAVNY----------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQS 284
Query: 311 LADPYFKGLAK 321
L + K + +
Sbjct: 285 LEHSWIKAIRR 295
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 183
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 184 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 211
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 212 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 185
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 186 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 213
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 214 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 123/304 (40%), Gaps = 55/304 (18%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS----DATXXXXXXXXXXXXX 80
Y I E +G G + +V + TG + A K I S
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L G+
Sbjct: 74 HHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 140 KYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
Y+HT + H DLKP+NI L + + +K+ DFGLA ++ + + + T +
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEF 184
Query: 196 RAPELCGSFFSKYTPA---IDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
APE+ Y P D+WSIG I LL+G F LG
Sbjct: 185 VAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGDTKQ 224
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEAL 311
E +A N A Y F ++ F + LA + ++L E + R T +EAL
Sbjct: 225 ETLA---NITAVSY----------DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 312 ADPY 315
P+
Sbjct: 272 RHPW 275
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 129
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 184
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 185 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 212
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 213 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 90/211 (42%), Gaps = 26/211 (12%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
Y+++E IG GSY V T + A+K I+ S HP+I
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDK-----SKRDPTEEIEILLRYGQHPNI 78
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
+ +K + + K +YVV EL + +L I + L+ + + ++Y+H
Sbjct: 79 ITLKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 144 TANVFHRDLKPKNILANADC----KLKICDFGLA---RVAFNDTPTAIFWTDYVATRWYR 196
V HRDLKP NIL + ++ICDFG A R T + ++V
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFV------ 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
APE+ Y A DIWS+G + LTG
Sbjct: 188 APEVLER--QGYDAACDIWSLGVLLYTXLTG 216
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 74
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-AN 146
K+ R F Y +L + + + +F+ +++ L Y+H+ N
Sbjct: 75 KYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 130
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
V +RDLK +N++ + D +KI DFGL + D T + T Y APE+ +
Sbjct: 131 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVLED--N 185
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKAR 264
Y A+D W +G + E++ G+ F ++ + +L +M ++ R +A+
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRTLGPEAK 238
Query: 265 RYLSSMRKKKP 275
LS + KK P
Sbjct: 239 SLLSGLLKKDP 249
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 20/251 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+++GKG++G V + TG A+K + ++ + HP + +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTAL 75
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-AN 146
K+ R F Y +L + + + +F+ +++ L Y+H+ N
Sbjct: 76 KYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN 131
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
V +RDLK +N++ + D +KI DFGL + D T + T Y APE+ +
Sbjct: 132 VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEVLED--N 186
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKAR 264
Y A+D W +G + E++ G+ F ++ + +L +M ++ R +A+
Sbjct: 187 DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-------RFPRTLGPEAK 239
Query: 265 RYLSSMRKKKP 275
LS + KK P
Sbjct: 240 SLLSGLLKKDP 250
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 116/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 96 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 151
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A P++ D T Y PE+
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA----PSSRR-DDLCGTLDYLPPEMIEG 206
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 207 RM--HDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 234
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 235 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 98/220 (44%), Gaps = 34/220 (15%)
Query: 26 KIEEVIGKGSYGVVCSA-YDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
K+E+ +G G +G V A Y+ T KVA+K + V H +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKL 245
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQF--FLYQLLRGLKY 141
V++ ++ + IY++ E M + L +K+++ + F Q+ G+ +
Sbjct: 246 VKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRW 194
I N HRDL+ NIL +A KI DFGLARV ++ TA I WT
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT------- 352
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE F +T D+WS G + E++T G+ +PG
Sbjct: 353 --APEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPG 388
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + A+ T Y PE+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL-----CGTLDYLPPEMIEG 183
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 184 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 211
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 212 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 47/295 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 126
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT-DYVATRWYRAPELCG 202
+ V HRD+KP+N+L + +LKI DFG + A + T + T DY+ PE+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYL------PPEMIE 180
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
+ +D+WS+G + E L GKP F +
Sbjct: 181 G--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------E 208
Query: 263 ARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
A Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 ANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 123/304 (40%), Gaps = 55/304 (18%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS----DATXXXXXXXXXXXXX 80
Y I E +G G + +V + TG + A K I S
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L G+
Sbjct: 74 HHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 140 KYIHTANVFHRDLKPKNI-LANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
Y+HT + H DLKP+NI L + + +K+ DFGLA ++ + + + T +
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA----HEIEDGVEFKNIFGTPEF 184
Query: 196 RAPELCGSFFSKYTPA---IDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
APE+ Y P D+WSIG I LL+G F LG
Sbjct: 185 VAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGDTKQ 224
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEAL 311
E +A + + F ++ F + + LA + ++L E + R T +EAL
Sbjct: 225 ETLANITS-------------VSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 312 ADPY 315
P+
Sbjct: 272 RHPW 275
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 45/293 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 69 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 124
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 179
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 180 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 207
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPY 315
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 208 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 45/293 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXL-----CGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPY 315
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 124/310 (40%), Gaps = 61/310 (19%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA------TXXXXXXXXXXX 78
Y++ E +G G + +V TG++ A K I +S +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNILRE 71
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLR 137
HP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+L
Sbjct: 72 IRHPNIITLHDIFENKT-----DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 138 GLKYIHTANVFHRDLKPKNIL---ANA-DCKLKICDFGLA-RVAFNDTPTAIFWTDYVAT 192
G+ Y+H+ + H DLKP+NI+ N + ++K+ DFG+A ++ + IF T
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT----- 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249
PE Y P D+WSIG I LL+G F LG
Sbjct: 182 -----PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGE 221
Query: 250 PSPEAIARVRNEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAE 308
E + + A Y F ++ F N + LA + R+L +PK R
Sbjct: 222 TKQETLTNI---SAVNY----------DFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIA 268
Query: 309 EALADPYFKG 318
++L + K
Sbjct: 269 QSLEHSWIKA 278
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 42/224 (18%)
Query: 26 KIEEVIGKGSYGVVCSA-YDTRTGEKVAIKKIN----DIFEHVSDATXXXXXXXXXXXXX 80
K+E+ +G G +G V A Y+ T KVA+K + + +++A
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQ------- 68
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQF--FLYQLLR 137
H +V++ ++ + IY++ E M + L +K+++ + F Q+
Sbjct: 69 HDKLVKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 122
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYV 190
G+ +I N HRDL+ NIL +A KI DFGLARV ++ TA I WT
Sbjct: 123 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT--- 179
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE F +T D+WS G + E++T G+ +PG
Sbjct: 180 ------APEAIN--FGSFTIKSDVWSFGILLMEIVTYGRIPYPG 215
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 183
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 184 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 211
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 212 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 49/306 (16%)
Query: 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
+Y I E +G+G +G+V +T + +K + K + +D H +
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKV--KGTDQVLVKKEISILNIARHRN 62
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAND-DLTPEHYQFFLYQLLRGLKY 141
I+ L S +++ ++FE + D+ + I + +L +++Q+ L++
Sbjct: 63 ILH-----LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 142 IHTANVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+H+ N+ H D++P+NI+ +KI +FG AR P F + A +Y APE
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYY-APE 173
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259
+ + A D+WS+G + LL+G + L + + I +
Sbjct: 174 VHQH--DVVSTATDMWSLGTLVYVLLSG---------------INPFLAETNQQIIENIM 216
Query: 260 NEKARRYLSSMRKKKPIPFSQK-FPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318
N + F ++ F + A+ ++R+L E K R TA EAL P+ K
Sbjct: 217 NAEY-------------TFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK- 262
Query: 319 LAKVER 324
K+ER
Sbjct: 263 -QKIER 267
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 33 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 89
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 90 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 145
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 146 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 206 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 249
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 28/234 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R K+ + +G+G++G V A T T VA+K + + H
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAN--------------DDL 123
H ++V LL + + V+ E + +L +++ D L
Sbjct: 90 GHHLNVVN----LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFL 145
Query: 124 TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183
T EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR D P
Sbjct: 146 TLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDX 204
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
+ D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 205 VRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + A+ T Y PE+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL-----CGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 27 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 83
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 84 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 139
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 140 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 200 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 243
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 53 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 109
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 110 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 165
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 166 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 226 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 269
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 35 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 91
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 92 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 147
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 208 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 251
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 118/306 (38%), Gaps = 55/306 (17%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
EV+G G++ V TG+ A+K I + H +IV ++
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKK--SPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 89 HILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147
I + Y+V +L+ +L I T + + Q+L +KY+H +
Sbjct: 73 DIYESTTHY-----YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 148 FHRDLKPKNILA---NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
HRDLKP+N+L + K+ I DFGL+++ N + T Y APE+
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-----CGTPGYVAPEVLAQ- 181
Query: 205 FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKAR 264
Y+ A+D WSIG I LL G P F E+
Sbjct: 182 -KPYSKAVDCWSIGVITYILLCGYPPF----------------------------YEETE 212
Query: 265 RYLSSMRKKKPIPFSQKF-----PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319
L K+ F F +A LLE+ +P +R T E+AL+ P+ G
Sbjct: 213 SKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEK----DPNERYTCEKALSHPWIDGN 268
Query: 320 AKVERE 325
+ R+
Sbjct: 269 TALHRD 274
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 118/296 (39%), Gaps = 49/296 (16%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + +R +Y++ E ++++ ++ + ++ +L L Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT-DYVATRWYRAPELC 201
H+ V HRD+KP+N+L + +LKI DFG + A + + T DY+ PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYL------PPEMI 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261
+ +D+WS+G + E L GKP F
Sbjct: 184 EG--RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------ 211
Query: 262 KARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
+A Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 212 EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 140 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 199
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 200 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 251
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 252 GLSLVEMAVGR 262
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 54 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 110
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 111 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 166
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 167 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 227 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 270
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 34 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 90
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 91 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 146
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 207 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 250
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 75 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 130
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEXIEG 185
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 186 --RXHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 213
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 214 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 30 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 86
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 87 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 142
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 143 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 203 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 246
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 35 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 91
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 92 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 147
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 208 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 251
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 81 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 140
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ ++ ++V TR Y +PE L G+ +S + DIWS+
Sbjct: 141 VNSRGEIKLCDFGVSGQLIDEMA-----NEFVGTRSYMSPERLQGTHYSVQS---DIWSM 192
Query: 218 GCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKP 275
G E+ G+ P + LD + + P P+ + V + + + +++ K P
Sbjct: 193 GLSLVEMAVGRYPRPPMAIFELLDYIVN---EPPPKLPSAVFSLEFQDFVNKCLIKNP 247
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 32 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 88
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 89 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 144
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
Y+ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 145 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 205 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 248
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 116/305 (38%), Gaps = 67/305 (21%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R +LCG+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRDDLCGT 172
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L GKP F
Sbjct: 173 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 209
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + ++ + F+ FP+ R L+ R+L P RP E L
Sbjct: 210 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
Query: 312 ADPYF 316
P+
Sbjct: 259 EHPWI 263
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 253
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 254 PDYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 308
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 127/299 (42%), Gaps = 62/299 (20%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKINDIFEHVS-DATXXXXXXXXXXXXXHPD-I 84
+GKG++G V YD TG VA+K++ +H D H D I
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQRDFQREIQILKALHSDFI 73
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDDLTPEHYQFFLY--QLLRG 138
V+ + + P R+ + +V E + S D Q +A D + + LY Q+ +G
Sbjct: 74 VKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDAS----RLLLYSSQICKG 126
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR----- 193
++Y+ + HRDL +NIL ++ +KI DFGLA++ D DY R
Sbjct: 127 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVREPGQS 179
Query: 194 ---WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250
WY L + FS+ + D+WS G + EL T D +P
Sbjct: 180 PIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT----------------YCDKSCSP 220
Query: 251 SPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPN--ANPLALR-LLERMLAFEPKDRPT 306
S E + + +E+ LS R + + Q+ P A P + L++ A P+DRP+
Sbjct: 221 SAEFLRMMGSERDVPALS--RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPS 277
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 251
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 252 PDYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 306
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 94 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 150
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 151 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 206
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 207 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 267 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 310
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 127
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI +FG + A + T + T Y PE+
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 182
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 183 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 210
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 211 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ IG GS+G V TG A+K + D I++ +
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 114/294 (38%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + A+ T Y PE+
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL-----CGTLDYLPPEMIEG 180
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 181 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 208
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 209 NTYQDTYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 246
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 247 PDYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 301
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 121 DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180
D LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD- 244
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
P + D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 245 PDYVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 299
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 67/305 (21%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 72 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 127
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG+
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRXXLCGT 171
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L GKP F
Sbjct: 172 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 208
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + ++ + F+ FP+ R L+ R+L P RP E L
Sbjct: 209 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 257
Query: 312 ADPYF 316
P+
Sbjct: 258 EHPWI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 114/293 (38%), Gaps = 45/293 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + + +A+K + E HP+
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 67 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 122
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG + A + T + T Y PE+
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 177
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 178 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 205
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPY 315
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 206 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 26/232 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R + + +G+G++G V A T T VA+K + + H
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAN------------DDLTP 125
H ++V LL + + V+ E + +L +++ D LT
Sbjct: 88 GHHLNVVN----LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 126 EHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185
EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR + D P +
Sbjct: 144 EHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD-PDYVR 202
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 203 KGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKINDIFEHVS-DATXXXXXXXXXXXXXHPD-I 84
+GKG++G V YD TG VA+K++ +H D H D I
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQRDFQREIQILKALHSDFI 74
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDDLTPEHYQFFLY--QLLRG 138
V+ + + P R+ + +V E + S D Q +A D + + LY Q+ +G
Sbjct: 75 VKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDAS----RLLLYSSQICKG 127
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR----- 193
++Y+ + HRDL +NIL ++ +KI DFGLA++ D DY R
Sbjct: 128 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVREPGQS 180
Query: 194 ---WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
WY L + FS+ + D+WS G + EL T
Sbjct: 181 PIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 41/216 (18%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKINDIFEHVS-DATXXXXXXXXXXXXXHPD-I 84
+GKG++G V YD TG VA+K++ +H D H D I
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQL----QHSGPDQQRDFQREIQILKALHSDFI 86
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDDLTPEHYQFFLY--QLLRG 138
V+ + + P R+ + +V E + S D Q +A D + + LY Q+ +G
Sbjct: 87 VKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDAS----RLLLYSSQICKG 139
Query: 139 LKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR----- 193
++Y+ + HRDL +NIL ++ +KI DFGLA++ D DY R
Sbjct: 140 MEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVREPGQS 192
Query: 194 ---WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
WY L + FS+ + D+WS G + EL T
Sbjct: 193 PIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT 225
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 30/213 (14%)
Query: 26 KIEEVIGKGSYGVVCSA-YDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
K+E+ +G G +G V A Y+ T KVA+K + V H +
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKL 239
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQF--FLYQLLRGLKY 141
V++ ++ + IY++ E M + L +K+++ + F Q+ G+ +
Sbjct: 240 VKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC 201
I N HRDL+ NIL +A KI DFGLARV I WT APE
Sbjct: 294 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVG---AKFPIKWT---------APEAI 341
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
F +T D+WS G + E++T G+ +PG
Sbjct: 342 N--FGSFTIKSDVWSFGILLMEIVTYGRIPYPG 372
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 105 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 164
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 165 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 216
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 217 GLSLVEMAVGR 227
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T WT T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WT-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKV----AIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+V+G G++G V GE V AIK +N+ ++ HP +
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANV-EFMDEALIMASMDHPHL 102
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
V + + L P+ I +V +LM L V + D++ + + Q+ +G+ Y+
Sbjct: 103 VRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
+ HRDL +N+L + +KI DFGLAR+ D + +W L
Sbjct: 157 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM---ALEC 213
Query: 203 SFFSKYTPAIDIWSIGCIFAELLT--GKP 229
+ K+T D+WS G EL+T GKP
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 27/157 (17%)
Query: 102 IYVVFELM-ESDLHQVIKANDD---LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157
IY++ E M + L +K+++ L P+ F Q+ G+ YI N HRDL+ N+
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA-QIAEGMAYIERKNYIHRDLRAANV 140
Query: 158 LANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTP 210
L + KI DFGLARV ++ TA I WT APE F +T
Sbjct: 141 LVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT---------APEAIN--FGCFTI 189
Query: 211 AIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246
++WS G + E++T GK +PG+ D+M+ L
Sbjct: 190 KSNVWSFGILLYEIVTYGKIPYPGRT---NADVMSAL 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 125/304 (41%), Gaps = 29/304 (9%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
E+V+G+G++ V + + T ++ A+K I H+ + H +++E+
Sbjct: 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEMLYQCQGHRNVLEL 76
Query: 88 KHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
R Y+VFE M + I + + L ++H
Sbjct: 77 IEFFEEEDR-----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG 131
Query: 147 VFHRDLKPKNILA---NADCKLKICDFGLAR-VAFNDTPTAIFWTDYV---ATRWYRAPE 199
+ HRDLKP+NIL N +KICDF L + N + I + + + Y APE
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 200 LCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
+ +F S Y D+WS+G I LL+G P F G+ G EA
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR--------CGSDCGWDRGEACP 243
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316
+N S+++ K + + + + A L+ ++L + K R +A + L P+
Sbjct: 244 ACQN----MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
Query: 317 KGLA 320
+G A
Sbjct: 300 QGCA 303
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD-IV 85
+GKG++G V YD TG VA+K++ D H D IV
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQ---HSGPDQQRDFQREIQILKALHSDFIV 71
Query: 86 EIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDDLTPEHYQFFLY--QLLRGL 139
+ + + P R E + +V E + S D Q +A D + + LY Q+ +G+
Sbjct: 72 KYRGVSYGPGRPELR---LVMEYLPSGCLRDFLQRHRARLDAS----RLLLYSSQICKGM 124
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
+Y+ + HRDL +NIL ++ +KI DFGLA++ D + + ++ APE
Sbjct: 125 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPE 184
Query: 200 -LCGSFFSKYTPAIDIWSIGCIFAELLT 226
L + FS+ + D+WS G + EL T
Sbjct: 185 SLSDNIFSRQS---DVWSFGVVLYELFT 209
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 190 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQL 240
D+WS+GCI + GK P + +++Q+
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQI 274
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 115/294 (39%), Gaps = 45/294 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI +FG + A + T + T Y PE+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 183
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L GKP F +A
Sbjct: 184 --RMHDEKVDLWSLGVLCYEFLVGKPPF------------------------------EA 211
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYF 316
Y + ++ + F+ FP+ R L+ R+L P RP E L P+
Sbjct: 212 NTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 190 GLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 190 GLSLVEMAVGR 200
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 115/304 (37%), Gaps = 67/304 (22%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 70 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 125
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG+
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRXXLCGT 169
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L GKP F
Sbjct: 170 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 206
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + ++ + F+ FP+ R L+ R+L P RP E L
Sbjct: 207 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 255
Query: 312 ADPY 315
P+
Sbjct: 256 EHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/305 (22%), Positives = 115/305 (37%), Gaps = 67/305 (21%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 71 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 126
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG+
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRDTLCGT 170
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L GKP F
Sbjct: 171 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 207
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + ++ + F+ FP+ R L+ R+L P RP E L
Sbjct: 208 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256
Query: 312 ADPYF 316
P+
Sbjct: 257 EHPWI 261
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 190 GLSLVEMAVGR 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ YI N HRDL+ NIL KI DFGLAR+ ++ TA I W
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235
T APE + + ++T D+WS G + EL+T G+ +PG N
Sbjct: 173 T---------APE--AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN 211
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 40 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 96
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 97 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 152
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 153 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 213 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 256
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS----DATXXXXXXXXXXXXXHPDIV 85
V+G+G++G V A + AIKKI E +S + + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 86 EIKHILLPPSRREFKD-IYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI 142
E ++ + P + + K +++ E E+ L+ +I + N + + Y Q+L L YI
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAF-----------NDTPTAIFWTDYVA 191
H+ + HRDLKP NI + +KI DFGLA+ N ++ T +
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
T Y A E+ Y ID++S+G IF E++
Sbjct: 193 TAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFGLA+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 35 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 91
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 92 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 147
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 208 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 251
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 115/304 (37%), Gaps = 67/304 (22%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATXXXXXXXXXXXXXHPD 83
++I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ K ++ T ++ +L L Y H
Sbjct: 73 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT----YITELANALSYCH 128
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L + +LKI DFG W+ + + R LCG+
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFG--------------WSVHAPSS--RRXXLCGT 172
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L GKP F
Sbjct: 173 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF--------------------- 209
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + ++ + F+ FP+ R L+ R+L P RP E L
Sbjct: 210 ---------EANTYQETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVL 258
Query: 312 ADPY 315
P+
Sbjct: 259 EHPW 262
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 84
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 144
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T WT T Y APE+ S
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WT-LCGTPEYLAPEIILS 198
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 199 --KGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 36 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 92
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 93 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 148
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 209 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 252
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 35 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 91
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 92 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 147
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 208 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 251
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS----DATXXXXXXXXXXXXXHPDIV 85
V+G+G++G V A + AIKKI E +S + + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 86 EIKHILLPPSRREFKD-IYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI 142
E ++ + P + + K +++ E E+ L+ +I + N + + Y Q+L L YI
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAF-----------NDTPTAIFWTDYVA 191
H+ + HRDLKP NI + +KI DFGLA+ N ++ T +
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
T Y A E+ Y ID++S+G IF E++
Sbjct: 193 TAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 190 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQL 240
D+WS+GCI + GK P + +++Q+
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQI 274
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F YQ+ +G+ ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARL 232
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
+W APE F YT D+WS G EL + G +PG V
Sbjct: 233 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 190 GLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 11/131 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNIL 158
+I + E M+ L QV+K + + +++GL Y+ + + HRD+KP NIL
Sbjct: 78 EISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNIL 137
Query: 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSI 217
N+ ++K+CDFG++ + + +V TR Y +PE L G+ +S + DIWS+
Sbjct: 138 VNSRGEIKLCDFGVSGQLIDSMANS-----FVGTRSYMSPERLQGTHYSVQS---DIWSM 189
Query: 218 GCIFAELLTGK 228
G E+ G+
Sbjct: 190 GLSLVEMAVGR 200
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 84 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 142
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 143 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ E
Sbjct: 202 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 240
Query: 273 KKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L +PK R + E LA PY +
Sbjct: 241 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKV----AIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+V+G G++G V GE V AIK +N+ ++ HP +
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN-VEFMDEALIMASMDHPHL 79
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
V + + L P+ I +V +LM L V + D++ + + Q+ +G+ Y+
Sbjct: 80 VRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
+ HRDL +N+L + +KI DFGLAR+ D + +W L
Sbjct: 134 EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM---ALEC 190
Query: 203 SFFSKYTPAIDIWSIGCIFAELLT--GKP 229
+ K+T D+WS G EL+T GKP
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F YQ+ +G+ ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 166 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 225
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G EL + G +PG
Sbjct: 226 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 266
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F YQ+ +G+ ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 173 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 232
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
+W APE F YT D+WS G EL + G +PG V
Sbjct: 233 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 33 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 89
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 90 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 145
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR ++ ++ + +W
Sbjct: 146 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 206 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 249
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F YQ+ +G+ ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 168 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 227
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G EL + G +PG
Sbjct: 228 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 268
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T WT T Y APE+ S Y
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT-----WT-LCGTPEYLAPEIILS--KGY 236
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 54/107 (50%), Gaps = 4/107 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F YQ+ +G+ ++ + N HRDL +NIL KICDFGLAR ND+ + +
Sbjct: 150 FSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
+W APE F YT D+WS G EL + G +PG V
Sbjct: 210 PVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)
Query: 123 LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182
LT E F YQ+ +G++++ + HRDL +N+L +KICDFGLAR +D+
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+ + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 229 VVRGNARLPVKW-MAPE--SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 15/198 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
IG G +G+V Y +KVAIK I E HP +V++ +
Sbjct: 16 IGSGQFGLVHLGY-WLNKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHPKLVQLYGV 71
Query: 91 LLPPSRREFKDIYVVFELMESD-LHQVIKANDDL-TPEHYQFFLYQLLRGLKYIHTANVF 148
L E I +V E ME L ++ L E + G+ Y+ A V
Sbjct: 72 CL-----EQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
HRDL +N L + +K+ DFG+ R +D T+ T + +W +PE+ FS+Y
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKF-PVKW-ASPEVFS--FSRY 182
Query: 209 TPAIDIWSIGCIFAELLT 226
+ D+WS G + E+ +
Sbjct: 183 SSKSDVWSFGVLMWEVFS 200
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT----XXXXXXXXXXXXX 80
+ + VIG+GSY V +T A+K + E V+D
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK--ELVNDDEDIDWVQTEKHVFEQASN 79
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ L
Sbjct: 80 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L +++ +K+ D+G+ + T + + T Y APE
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 192 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKIN--DIFEHVSDATXXXXXXXXXXXXXHPDI 84
+G+G +G V YD TGE+VA+K + H++D H +I
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL---KKEIEILRNLYHENI 85
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQF-FLYQLLRGLKYI 142
V+ K I K ++ E + S L + + N + Q + Q+ +G+ Y+
Sbjct: 86 VKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
+ HRDL +N+L ++ ++KI DFGL + D D + ++ APE
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL- 201
Query: 203 SFFSKYTPAIDIWSIGCIFAELLT 226
SK+ A D+WS G ELLT
Sbjct: 202 -MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 26/215 (12%)
Query: 28 EEVIGKGSYGVVCSA-YDTRTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
+ VIGKG +GVV Y + ++ AIK ++ I E + HP++
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNV 84
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI 142
+ + I+LPP +V+ M DL Q I++ + T + F Q+ RG++Y+
Sbjct: 85 LALIGIMLPPEGLP----HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
HRDL +N + + +K+ DFGLAR I +Y + + +R L
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--------DILDREYYSVQQHRHARLPV 192
Query: 203 SFFS-------KYTPAIDIWSIGCIFAELLT-GKP 229
+ + ++T D+WS G + ELLT G P
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 12/217 (5%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--SDATXXXXXXXXXXXXXHP 82
Y + +VIG+G++G V + +KV K+ FE + SD+ P
Sbjct: 77 YDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 135
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
+V+ L + ++ K +Y+V E M + +N D+ + +F+ +++ L I
Sbjct: 136 WVVQ-----LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAI 190
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ + HRD+KP N+L + LK+ DFG D + V T Y +PE+
Sbjct: 191 HSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM--DETGMVHCDTAVGTPDYISPEVLK 248
Query: 203 SFFSK--YTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
S Y D WS+G E+L G F ++V
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV 285
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 47/299 (15%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG +G VC+ TG+ A KK+ + V +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-----EKVNSRF 245
Query: 90 ILLPPSRREFKD-IYVVFELMESD---LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
++ E KD + +V LM H F+ ++ GL+ +H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+ +RDLKP+NIL + ++I D GLA P V T Y APE+ +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMAPEVVKN-- 359
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
+YT + D W++GC+ E++ G+ +P + +++ E+ R
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQ--------------------SPFQQRKKKIKREEVER 399
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR-----PTAEEALADPYFKGL 319
+ K+ P +S++F +P A L ++L +P +R +A E P FK L
Sbjct: 400 LV----KEVPEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 120/299 (40%), Gaps = 47/299 (15%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKH 89
V+GKG +G VC+ TG+ A KK+ + V +
Sbjct: 191 VLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQIL-----EKVNSRF 245
Query: 90 ILLPPSRREFKD-IYVVFELMESD---LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
++ E KD + +V LM H F+ ++ GL+ +H
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE 305
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+ +RDLKP+NIL + ++I D GLA P V T Y APE+ +
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMAPEVVKN-- 359
Query: 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265
+YT + D W++GC+ E++ G+ +P + +++ E+ R
Sbjct: 360 ERYTFSPDWWALGCLLYEMIAGQ--------------------SPFQQRKKKIKREEVER 399
Query: 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR-----PTAEEALADPYFKGL 319
+ K+ P +S++F +P A L ++L +P +R +A E P FK L
Sbjct: 400 LV----KEVPEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 87 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 145
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 146 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 204
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ E
Sbjct: 205 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 243
Query: 273 KKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L +PK R + E LA PY +
Sbjct: 244 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 84/209 (40%), Gaps = 20/209 (9%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
EV+GKG +G TGE + +K++ E HP++++
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT--FLKEVKVMRCLEHPNVLKFI 73
Query: 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF-FLYQLLRGLKYIHTANV 147
+L R F Y+ L +IK+ D P + F + G+ Y+H+ N+
Sbjct: 74 GVLYKDKRLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFND-----------TPTAIFWTDYVATRWYR 196
HRDL N L + + + DFGLAR+ ++ P V ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELL 225
APE+ Y +D++S G + E++
Sbjct: 190 APEMING--RSYDEKVDVFSFGIVLCEII 216
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 102/230 (44%), Gaps = 23/230 (10%)
Query: 28 EEVIGKGSYGVVCSAYDT---RTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
EVIG+G +G C + T G+K+ A+K +N I + + + + HP
Sbjct: 36 NEVIGRGHFG--CVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHP 92
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--FLYQLLRGLK 140
+++ + I L R E + V+ + DL I+ N+ P F Q+ +G+K
Sbjct: 93 NVLSLLGICL---RSEGSPLVVLPYMKHGDLRNFIR-NETHNPTVKDLIGFGLQVAKGMK 148
Query: 141 YIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF--WTDYVATRWYRAP 198
++ + HRDL +N + + +K+ DFGLAR + ++ + +W
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247
L K+T D+WS G + EL+T G P +P N DI LL
Sbjct: 209 SLQT---QKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT---FDITVYLL 252
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+ +G GS+G V TG A+K ++ + P +V++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 KHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ +
Sbjct: 107 EY-----SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
+ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--K 213
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 83 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 141
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 142 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 200
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ E
Sbjct: 201 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 239
Query: 273 KKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L +PK R + E LA PY +
Sbjct: 240 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT----XXXXXXXXXXXXX 80
+ + VIG+GSY V +T A+K + E V+D
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK--ELVNDDEDIDWVQTEKHVFEQASN 64
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ L
Sbjct: 65 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L +++ +K+ D+G+ + T + + T Y APE
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 177 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEIK 88
+G GS+G V TG A+K ++ + P +V+++
Sbjct: 49 TLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLE 108
Query: 89 HILLPPSRREFKDIYVVFEL-----MESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
S ++ ++Y+V E M S L ++ + + H +F+ Q++ +Y+H
Sbjct: 109 F-----SFKDNSNLYMVLEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+ +G GS+G V TG A+K ++ + P +V++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 KHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ +
Sbjct: 107 EY-----SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
+ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--K 213
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V T Y PE G SK +P
Sbjct: 162 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ E
Sbjct: 221 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAIID-PNHEI------------------ 259
Query: 273 KKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L +PK R + E LA PY +
Sbjct: 260 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 31/236 (13%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R + + +G+G++G V A T T VA+K + + H
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAN---------------DD 122
H ++V LL + + V+ E + +L +++ D
Sbjct: 89 GHHLNVVN----LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDF 144
Query: 123 LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182
LT EH + +Q+ +G++++ + HRDL +NIL + +KICDFGLAR D P
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PD 203
Query: 183 AIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
+ D + APE + F + YT D+WS G + E+ + G +PG +
Sbjct: 204 XVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 256
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 43/195 (22%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND-------TPTAIF- 185
Q+ ++++H+ + HRDLKP NI D +K+ DFGL D TP +
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 186 -WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T V T+ Y +PE + Y+ +DI+S+G I EL L+P + ++ +T
Sbjct: 186 RHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRTLT 238
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304
D VRN K P F+QK+ P +++ ML+ P +R
Sbjct: 239 D------------VRNLKF-----------PPLFTQKY----PCEYVMVQDMLSPSPMER 271
Query: 305 PTAEEALADPYFKGL 319
P A + + F+ L
Sbjct: 272 PEAINIIENAVFEDL 286
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT----XXXXXXXXXXXXX 80
+ + VIG+GSY V +T A+K + E V+D
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK--ELVNDDEDIDWVQTEKHVFEQASN 68
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ L
Sbjct: 69 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L +++ +K+ D+G+ + T + + T Y APE
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 181 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 15/205 (7%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
+ +G GS+G V TG A+K ++ + P +V++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 88 KHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN 146
++ S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ +
Sbjct: 107 EY-----SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD 161
Query: 147 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS 206
+ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--K 213
Query: 207 KYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 31 IGKGSYGVV-CSAYD---TRTGEKVAIKKIN--DIFEHVSDATXXXXXXXXXXXXXHPDI 84
+G+G +G V YD TGE+VA+K + H++D H +I
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADL---KKEIEILRNLYHENI 73
Query: 85 VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQF-FLYQLLRGLKYI 142
V+ K I K ++ E + S L + + N + Q + Q+ +G+ Y+
Sbjct: 74 VKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
+ HRDL +N+L ++ ++KI DFGL + D D + ++ APE
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 203 SFFSKYTPAIDIWSIGCIFAELLT 226
SK+ A D+WS G ELLT
Sbjct: 191 Q--SKFYIASDVWSFGVTLHELLT 212
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKEIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +++ DFGLA+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 115/290 (39%), Gaps = 56/290 (19%)
Query: 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE 86
+ E IG+G++G V S VA+K + A HP+IV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVR 176
Query: 87 IKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT---PEHYQFFLYQLLR------ 137
+ + + + IY+V EL ++ D LT E + + LL+
Sbjct: 177 LIGVC-----TQKQPIYIVMEL--------VQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 138 -GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
G++Y+ + HRDL +N L LKI DFG++R + A V +W
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-T 282
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APE + +Y+ D+WS G + E + L +P P
Sbjct: 283 APEALN--YGRYSSESDVWSFGILLWETFS-------------------LGASPYPN--- 318
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ N++ R + + K +P + P+A RL+E+ A+EP RP+
Sbjct: 319 -LSNQQTREF---VEKGGRLPCPELCPDA---VFRLMEQCWAYEPGQRPS 361
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ H +F+ Q++ +Y+H
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 17/212 (8%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDAT----XXXXXXXXXXXXX 80
+ + VIG+GSY V +T A++ + E V+D
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKK--ELVNDDEDIDWVQTEKHVFEQASN 111
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP +V + SR ++ V E + DL ++ L EH +F+ ++ L
Sbjct: 112 HPFLVGLHSCFQTESR-----LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 166
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
Y+H + +RDLK N+L +++ +K+ D+G+ + T + + T Y APE
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPE 223
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
+ Y ++D W++G + E++ G+ F
Sbjct: 224 ILRG--EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 114/296 (38%), Gaps = 45/296 (15%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ + ++ T ++ +L L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT----YITELANALSYCH 129
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L ++ +LKI DFG + A + T + T Y PE+
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG 184
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263
+ +D+WS+G + E L G P F +A
Sbjct: 185 --RMHDEKVDLWSLGVLCYEFLVGMPPF------------------------------EA 212
Query: 264 RRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYFKG 318
Y + R+ + F+ FP+ R L+ R+L R T E L P+ K
Sbjct: 213 HTYQETYRRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVLEHPWIKA 266
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 119
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 179
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 233
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 234 --KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 131 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 189
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A DT T++ V Y PE G SK +P
Sbjct: 190 DGMLKLIDFGIANQMQPDT-TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQL 240
D+WS+GCI + GK P + +++Q+
Sbjct: 249 DVWSLGCILYYMTYGKT--PFQQIINQI 274
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 102/220 (46%), Gaps = 15/220 (6%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDA-TXXXXXXXXXXXXXHPD 83
++I +VIG+G++G V + + +KV KI + +E + A T
Sbjct: 76 FEILKVIGRGAFGEV-AVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 84 IVEIKHILLPPSRREFKDIYVVFEL-MESDLHQVIKANDDLTPEHY-QFFLYQLLRGLKY 141
+ H ++ ++Y+V + + DL ++ +D PE +F+L +++ +
Sbjct: 135 WITTLHYAF----QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDS 190
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND----TPTAIFWTDYVATRWYRA 197
+H + HRD+KP NIL + + +++ DFG D + A+ DY++ +A
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
E +Y P D WS+G E+L G+ F +++V
Sbjct: 251 ME---GGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 16/201 (7%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G+G+YGVV +G+ A+K+I P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 91 LLPPSRREFKDIYVVFELMESDL----HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA- 145
L RE D+++ EL ++ L QVI + + +++ L+++H+
Sbjct: 102 LF----RE-GDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF 205
+V HRD+KP N+L NA ++K CDFG++ +D I + Y APE
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI----DAGCKPYXAPERINPEL 212
Query: 206 SK--YTPAIDIWSIGCIFAEL 224
++ Y+ DIWS+G EL
Sbjct: 213 NQKGYSVKSDIWSLGITXIEL 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 123 LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182
+T E + +Q+ RG++++ + HRDL +NIL + + +KICDFGLAR + + P
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN-PD 254
Query: 183 AIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEL--LTGKPLFPG 233
+ D + APE S F K Y+ D+WS G + E+ L G P +PG
Sbjct: 255 YVRKGDTRLPLKWMAPE---SIFDKIYSTKSDVWSYGVLLWEIFSLGGSP-YPG 304
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 88/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +K+ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++I +VIG+G++G V + + E++ KI + +E + A +
Sbjct: 92 FEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV------L 144
Query: 85 VEIKHILLPPSRREFKD---IYVVFEL-MESDLHQVIKANDDLTPEHY-QFFLYQLLRGL 139
V + F+D +Y+V + + DL ++ +D PE +F++ +++ +
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 204
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
IH + HRD+KP N+L + + +++ DFG + + ND T + + V T Y +PE
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGT-VQSSVAVGTPDYISPE 262
Query: 200 LCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
+ + KY P D WS+G E+L G+ F +++V
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 303
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 38/250 (15%)
Query: 104 VVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
++FE + L+++I N+ E + + ++L+ L Y+ ++ H DLKP+NIL +
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Query: 162 ---------------DCKLKICDFGLARVAFNDTPTAIFWTDY----VATRWYRAPELCG 202
K++I + D A F +DY + TR YRAPE+
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL 232
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262
+ + + D+WS GC+ AEL TG LF + L +M ++ +
Sbjct: 233 NL--GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTN 290
Query: 263 ARRYLSSMRKKKPIPFSQKFPNA---------------NPLALRLLERMLAFEPKDRPTA 307
+Y++ K P + N+ + L L +L +P RP+
Sbjct: 291 GSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSP 350
Query: 308 EEALADPYFK 317
E L + +
Sbjct: 351 AELLKHKFLE 360
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 115/290 (39%), Gaps = 56/290 (19%)
Query: 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE 86
+ E IG+G++G V S VA+K + A HP+IV
Sbjct: 118 LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVR 176
Query: 87 IKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLT---PEHYQFFLYQLLR------ 137
+ + + + IY+V EL ++ D LT E + + LL+
Sbjct: 177 LIGVC-----TQKQPIYIVMEL--------VQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 138 -GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
G++Y+ + HRDL +N L LKI DFG++R + A V +W
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-T 282
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256
APE + +Y+ D+WS G + E + L +P P
Sbjct: 283 APEALN--YGRYSSESDVWSFGILLWETFS-------------------LGASPYPN--- 318
Query: 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ N++ R + + K +P + P+A RL+E+ A+EP RP+
Sbjct: 319 -LSNQQTREF---VEKGGRLPCPELCPDA---VFRLMEQCWAYEPGQRPS 361
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 172 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q RG+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 175
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ S Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 176 WM---------APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G+ SP+ +++VR+ ++ +R ++ KKK
Sbjct: 227 G-RGSLSPD-LSKVRSNCPKRMKRLMAECLKKK 257
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 17/221 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++I +VIG+G++G V + + E++ KI + +E + A +
Sbjct: 76 FEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV------L 128
Query: 85 VEIKHILLPPSRREFKD---IYVVFEL-MESDLHQVIKANDDLTPEHY-QFFLYQLLRGL 139
V + F+D +Y+V + + DL ++ +D PE +F++ +++ +
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAI 188
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
IH + HRD+KP N+L + + +++ DFG + + ND T + + V T Y +PE
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGT-VQSSVAVGTPDYISPE 246
Query: 200 LCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
+ + KY P D WS+G E+L G+ F +++V
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 151
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 205
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 206 --KGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD ++ +ME ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N++ + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 119/311 (38%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 57
Query: 83 DIVEIKHILLPPSRREFKDIY-------------VVFELME--SDLHQVIKANDDLTPEH 127
V ++ +LL F + ++ E ME DL I L E
Sbjct: 58 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 170
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 171 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 221
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 222 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 252
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 253 FEEIQNHPWMQ 263
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 58
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 59 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 172 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 222
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 223 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 253
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 254 FEEIQNHPWMQ 264
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 99
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 159
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 214 --KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LAGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 431 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 348 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 348 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 92
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 93 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 150
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 151 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 205
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 206 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 256
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 257 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 287
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 288 FEEIQNHPWMQ 298
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--SDATXXXXXXXXXXXXXHP 82
Y++ +VIG+G++G V ++ KV K+ FE + SD+ P
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
+V++ + ++ + +Y+V E M + +N D+ + +F+ +++ L I
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFG----LARVAFNDTPTAIFWTDYVATRWYRAP 198
H+ HRD+KP N+L + LK+ DFG + + TA+ DY+ +P
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI------SP 243
Query: 199 ELCGSFFSK--YTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
E+ S Y D WS+G E+L G F ++V
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW 178
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 179 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 178
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 179 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 137/339 (40%), Gaps = 51/339 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI--NDIFEHVSDATXXXXXXXXXXXXX 80
+RY + +G G + V A D VA+K + + ++ ++
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 81 HPDIVEIKHILLPPSRREFKD-----IYVVFELMESDLHQVIKANDDLTPEHYQF-FLY- 133
D + HIL K + +VFE++ +L +IK EH +Y
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY-----EHRGIPLIYV 133
Query: 134 -----QLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDF--GLARVAFNDTPTAIF 185
QLL GL Y+H + H D+KP+N+L ++I D L ++ D A +
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVL------MEIVDSPENLIQIKIADLGNACW 187
Query: 186 W----TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF---PGKNVVH 238
+ T+ + TR YR+PE+ + + DIWS C+ EL+TG LF G +
Sbjct: 188 YDEHYTNSIQTREYRSPEVL--LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 239 QLDIMTDLLGTPSPEAIARVRNEK-------ARRYLSSMRKKKPIP----FSQKFPNANP 287
D + ++ +RN K +R L ++ K K P ++K+ +
Sbjct: 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305
Query: 288 LALRL---LERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
A + L ML +P+ R A + P+ K +E
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME 344
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 348 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--SDATXXXXXXXXXXXXXHP 82
Y++ +VIG+G++G V ++ KV K+ FE + SD+ P
Sbjct: 71 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 129
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
+V++ + ++ + +Y+V E M + +N D+ + +F+ +++ L I
Sbjct: 130 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFG----LARVAFNDTPTAIFWTDYVATRWYRAP 198
H+ HRD+KP N+L + LK+ DFG + + TA+ DY+ +P
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI------SP 238
Query: 199 ELCGSFFSK--YTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
E+ S Y D WS+G E+L G F ++V
Sbjct: 239 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 24/226 (10%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--SDATXXXXXXXXXXXXX 80
+Y + +++G+GSYG V D+ T + A+K + +
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPE------HYQFFLYQ 134
H +++++ +L E + +Y+V E + +++ D PE + Q
Sbjct: 65 HKNVIQLVDVLY---NEEKQKMYMVMEYCVCGMQEML----DSVPEKRFPVCQAHGYFCQ 117
Query: 135 LLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV----AFNDTPTAIFWTDYV 190
L+ GL+Y+H+ + H+D+KP N+L LKI G+A A +DT
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDT-----CRTSQ 172
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV 236
+ ++ PE+ + +DIWS G + TG F G N+
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI 218
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 17/205 (8%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXX--XXXXXXXXXXHPDIVEIK 88
+G+G +GVV Y T VA+KK+ + + ++ H ++VE
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE-- 94
Query: 89 HILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQF---FLYQLLRGLKYIHT 144
L + D+ +V+ M L + D P + G+ ++H
Sbjct: 95 ---LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
+ HRD+K NIL + KI DFGLAR + T + + V T Y APE +
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT-VMXSRIVGTTAYMAPE---AL 207
Query: 205 FSKYTPAIDIWSIGCIFAELLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 137/339 (40%), Gaps = 51/339 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI--NDIFEHVSDATXXXXXXXXXXXXX 80
+RY + +G G + V A D VA+K + + ++ ++
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 81 HPDIVEIKHILLPPSRREFKD-----IYVVFELMESDLHQVIKANDDLTPEHYQF-FLY- 133
D + HIL K + +VFE++ +L +IK EH +Y
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKY-----EHRGIPLIYV 133
Query: 134 -----QLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDF--GLARVAFNDTPTAIF 185
QLL GL Y+H + H D+KP+N+L ++I D L ++ D A +
Sbjct: 134 KQISKQLLLGLDYMHRRCGIIHTDIKPENVL------MEIVDSPENLIQIKIADLGNACW 187
Query: 186 W----TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF---PGKNVVH 238
+ T+ + TR YR+PE+ + + DIWS C+ EL+TG LF G +
Sbjct: 188 YDEHYTNSIQTREYRSPEVL--LGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245
Query: 239 QLDIMTDLLGTPSPEAIARVRNEK-------ARRYLSSMRKKKPIP----FSQKFPNANP 287
D + ++ +RN K +R L ++ K K P ++K+ +
Sbjct: 246 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305
Query: 288 LALRL---LERMLAFEPKDRPTAEEALADPYFKGLAKVE 323
A + L ML +P+ R A + P+ K +E
Sbjct: 306 EAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME 344
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 73
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 74 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 186
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 187 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 237
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 238 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 268
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 269 FEEIQNHPWMQ 279
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 173 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V +G A+K + D I++ +
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 98
Query: 88 KHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LXGTPEYLAPEIILS 212
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 213 --KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 175 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 170
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 171 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--SDATXXXXXXXXXXXXXHP 82
Y++ +VIG+G++G V ++ KV K+ FE + SD+ P
Sbjct: 76 YEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSP 134
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
+V++ + ++ + +Y+V E M + +N D+ + +F+ +++ L I
Sbjct: 135 WVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFG----LARVAFNDTPTAIFWTDYVATRWYRAP 198
H+ HRD+KP N+L + LK+ DFG + + TA+ DY+ +P
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYI------SP 243
Query: 199 ELCGSFFSK--YTPAIDIWSIGCIFAELLTGKPLFPGKNVV 237
E+ S Y D WS+G E+L G F ++V
Sbjct: 244 EVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 100
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 101 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 213
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 214 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 264
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 265 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 295
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 296 FEEIQNHPWMQ 306
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 165 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 216
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V TG A+K + D I++ +
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 91
Query: 88 KHILLPPSRREFKD---IYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ H +F+ Q++ +Y+H
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH 151
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 152 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 205
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 206 --KGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 98/232 (42%), Gaps = 26/232 (11%)
Query: 24 RYKIEEVIGKGSYGVVCSAY-----DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXX 78
R + + +G+G++G V A T T VA+K + + H
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 79 XXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAN------------DDLTP 125
H ++V LL + + V+ E + +L +++ D LT
Sbjct: 88 GHHLNVVN----LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTL 143
Query: 126 EHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185
EH + +Q+ +G++++ + HRDL +NIL + +KI DFGLAR + D P +
Sbjct: 144 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD-PDYVR 202
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236
D + APE F YT D+WS G + E+ + G +PG +
Sbjct: 203 KGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 58
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 59 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 172 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 222
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 223 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 253
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 254 FEEIQNHPWMQ 264
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 105
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 106 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 163
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 164 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 218
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 219 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 72
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 73 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 185
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 186 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 236
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 237 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 267
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 268 FEEIQNHPWMQ 278
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 73
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 74 LLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 184 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 210 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 269
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 270 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 308
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 119/306 (38%), Gaps = 59/306 (19%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI--------NDIFEHVSDATXXXXXXX 74
+ Y++ ++GKG +G V + + +VAIK I + + + V+
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 75 XXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQ 134
HP ++ + +E + + L DL I L + F Q
Sbjct: 91 VGAGGGHPGVIRLLDWF---ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQ 147
Query: 135 LLRGLKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
++ +++ H+ V HRD+K +NIL + C K+ DFG + +D P +TD+ T
Sbjct: 148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCA-KLIDFG-SGALLHDEP----YTDFDGT 201
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
R Y PE PA +WS+G + +++ G F
Sbjct: 202 RVYSPPEWISRHQYHALPAT-VWSLGILLYDMVCGDIPF--------------------- 239
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFP-NANPLALRLLERMLAFEPKDRPTAEEAL 311
E+ + L + FP + +P L+ R LA +P RP+ EE L
Sbjct: 240 --------ERDQEILEA---------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282
Query: 312 ADPYFK 317
DP+ +
Sbjct: 283 LDPWMQ 288
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 24 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 79
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 80 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 133
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 134 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT-------- 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 186 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 221
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 249
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 250 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 280
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 281 FEEIQNHPWMQ 291
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 58
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 59 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 116
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 171
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 172 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 222
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 223 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 253
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 254 FEEIQNHPWMQ 264
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 57
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 58 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 115
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 170
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 171 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 221
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 222 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 252
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 253 FEEIQNHPWMQ 263
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 22 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 78 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT-------- 183
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 184 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 74
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 75 LLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT---------APES 184
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 185 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 80
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 81 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 138
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 139 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 193
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 194 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F +Q+ +G++Y+ ++ HRDL +NIL K+KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 56
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 57 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 114
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 169
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 170 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 220
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 221 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 251
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 252 FEEIQNHPWMQ 262
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 73
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 74 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 186
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 187 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 100
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 101 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 158
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 159 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 213
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 214 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 153 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 212
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 213 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 151 YQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 210
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 211 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 86/205 (41%), Gaps = 17/205 (8%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXX--XXXXXXXXXXHPDIVEIK 88
+G+G +GVV Y T VA+KK+ + + ++ H ++VE
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE-- 94
Query: 89 HILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQF---FLYQLLRGLKYIHT 144
L + D+ +V+ M L + D P + G+ ++H
Sbjct: 95 ---LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
+ HRD+K NIL + KI DFGLAR + T + V T Y APE +
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT-VMXXRIVGTTAYMAPE---AL 207
Query: 205 FSKYTPAIDIWSIGCIFAELLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 73
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 74 LLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 184 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 73
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 74 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 131
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 132 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 186
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 187 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 130/314 (41%), Gaps = 63/314 (20%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
E+++G GS G V + G VA+K++ F ++ HP+++
Sbjct: 38 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 92
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--------FLYQLLRGL 139
S + +Y+ EL +L ++++ + ++ E+ + L Q+ G+
Sbjct: 93 Y-----CSETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISLLRQIASGV 146
Query: 140 KYIHTANVFHRDLKPKNILANA-------------DCKLKICDFGLARVAFNDTPTAIFW 186
++H+ + HRDLKP+NIL + + ++ I DFGL + D+ F
Sbjct: 147 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFR 204
Query: 187 TDY---VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242
+ T +RAPEL S + T +IDI+S+GC+F +L+ GK+
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS-----KGKH------- 252
Query: 243 MTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK 302
P R R + S+ + K + A L+ +M+ +P
Sbjct: 253 ---------PFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMIDHDPL 299
Query: 303 DRPTAEEALADPYF 316
RPTA + L P F
Sbjct: 300 KRPTAMKVLRHPLF 313
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + +KI DFGLAR N +
Sbjct: 156 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 215
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 216 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 114/307 (37%), Gaps = 67/307 (21%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + ++ +A+K + E HP+
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
I+ + +R Y + +L ++ + ++ T ++ +L L Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT----YITELANALSYCH 129
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ V HRD+KP+N+L ++ +LKI DFG W+ + + R LCG+
Sbjct: 130 SKRVIHRDIKPENLLLGSNGELKIADFG--------------WSVHAPSS--RRDTLCGT 173
Query: 204 FFSKYTP-----------AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252
Y P +D+WS+G + E L G P F
Sbjct: 174 L--DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF--------------------- 210
Query: 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEAL 311
+A Y + R+ + F+ FP+ R L+ R+L R T E L
Sbjct: 211 ---------EAHTYQETYRRISRVEFT--FPDFVTEGARDLISRLLKHNASQRLTLAEVL 259
Query: 312 ADPYFKG 318
P+ K
Sbjct: 260 EHPWIKA 266
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 185 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 236
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 237 NKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 16 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 71
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 72 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 126 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT-------- 177
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 178 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 85
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 86 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 143
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 144 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 198
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 199 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 25 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 80
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 81 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 134
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 135 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT-------- 186
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 187 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 71
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 72 LLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT---------APES 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
++K++ D+W+ G + E+ T G +PG
Sbjct: 182 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 131/320 (40%), Gaps = 75/320 (23%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
E+++G GS G V + G VA+K++ F ++ HP+++
Sbjct: 38 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 92
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--------FLYQLLRGL 139
S + +Y+ EL +L ++++ + ++ E+ + L Q+ G+
Sbjct: 93 Y-----CSETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISLLRQIASGV 146
Query: 140 KYIHTANVFHRDLKPKNILANA-------------DCKLKICDFGLARVAFNDTPTAIFW 186
++H+ + HRDLKP+NIL + + ++ I DFGL + D+ F
Sbjct: 147 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFR 204
Query: 187 TDY---VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGK-----NV 236
+ T +RAPEL S + T +IDI+S+GC+F +L+ GK F K N+
Sbjct: 205 XNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNI 264
Query: 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 296
+ + + ++ IA A L+ +M
Sbjct: 265 IRGIFSLDEMKCLHDRSLIAE-------------------------------ATDLISQM 293
Query: 297 LAFEPKDRPTAEEALADPYF 316
+ +P RPTA + L P F
Sbjct: 294 IDHDPLKRPTAMKVLRHPLF 313
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 72
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 73 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 130
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 131 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 185
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 186 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 117/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 53
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 54 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 167 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 217
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ + L+ LA P DRPT
Sbjct: 218 --------------------------RGQVFFRQRVSSE---CQHLIRWCLALRPSDRPT 248
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 249 FEEIQNHPWMQ 259
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 15/210 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++I +G G++G V A + TG A K I E + HP I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYI 78
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYI 142
V+ LL + K ++++ E I D LT Q Q+L L ++
Sbjct: 79 VK----LLGAYYHDGK-LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 133
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ + HRDLK N+L + +++ DFG V+ + T ++ T ++ APE+
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPEVVM 190
Query: 203 SFFSKYTP---AIDIWSIGCIFAELLTGKP 229
K TP DIWS+G E+ +P
Sbjct: 191 CETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 21/208 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVE-I 87
+ +G GS+G V +G A+K + D I++ +
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMK--------ILDKQKVVKLKQIEHTLNEKRILQAV 85
Query: 88 KHILLPPSRREFKD---IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH 143
L FKD +Y+V E + ++ ++ + H +F+ Q++ +Y+H
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 145
Query: 144 TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
+ ++ +RDLKP+N+L + +++ DFG A+ T W T Y APE+ S
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS 199
Query: 204 FFSKYTPAIDIWSIGCIFAELLTGKPLF 231
Y A+D W++G + E+ G P F
Sbjct: 200 --KGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 90/221 (40%), Gaps = 24/221 (10%)
Query: 14 DFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXX 73
DF+ GE +G G++G V A + T A K I+ E +
Sbjct: 37 DFWEIIGE---------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEI 85
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD--LTPEHYQFF 131
HP+IV+ LL E +++++ E + + LT Q
Sbjct: 86 DILASCDHPNIVK----LLDAFYYE-NNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
Q L L Y+H + HRDLK NIL D +K+ DFG V+ +T T ++
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRTIQRRDSFIG 197
Query: 192 TRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAELLTGKP 229
T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V++ +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 91 --LLPPSRREFKDIYVVFELM--ESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTA 145
L PP Y+V E M + L + + N +++T + Q+ ++Y+
Sbjct: 97 CTLEPP-------FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAP 198
N HRDL +N L + +K+ DFGL+R+ DT TA I WT AP
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------AP 200
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254
E ++ ++ D+W+ G + E+ T G +PG ++ D++ PE
Sbjct: 201 ESLA--YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEG 255
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186
H +F+ Q++ +Y+H+ ++ +RDLKP+N+L + +++ DFG A+ T W
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----W 196
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
T Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 197 X-LCGTPEYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F +Q+ +G++Y+ + HRDL +NIL K+KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 86
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 87 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 144
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 145 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 199
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 200 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 209
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 210 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 248
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 205
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 206 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 244
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186
H +F+ Q++ +Y+H+ ++ +RDLKP+N+L + +++ DFG A+ T W
Sbjct: 142 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----W 196
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
T Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 197 X-LCGTPEYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186
H +F+ Q++ +Y+H+ ++ +RDLKP+N+L + +++ DFG A+ T W
Sbjct: 137 HARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----W 191
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
T Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 192 X-LCGTPEYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N++ + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIIIS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 83/203 (40%), Gaps = 10/203 (4%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
I+E IG GS+G V A G VA+K + + H HP+IV
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
+ P Y+ + LH+ A + L Y + +G+ Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 146 N--VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGS 203
N + HR+LK N+L + +K+CDFGL+R+ T + T + APE+
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL---KASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 204 FFSKYTPAIDIWSIGCIFAELLT 226
S D++S G I EL T
Sbjct: 214 EPSNEKS--DVYSFGVILWELAT 234
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL NIL + K+ DFGLAR+ ++ TA I W
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 182 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 132/318 (41%), Gaps = 67/318 (21%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
E+++G GS G V + G VA+K++ F ++ HP+++
Sbjct: 20 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 74
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--------FLYQLLRGL 139
S + +Y+ EL +L ++++ + ++ E+ + L Q+ G+
Sbjct: 75 Y-----CSETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISLLRQIASGV 128
Query: 140 KYIHTANVFHRDLKPKNILANA-------------DCKLKICDFGLARVAFNDTPTAIFW 186
++H+ + HRDLKP+NIL + + ++ I DFGL + D+ + F
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQSSFR 186
Query: 187 TDY---VATRWYRAPELCGSFFS-----KYTPAIDIWSIGCIFAELLTGKPLFPGKNVVH 238
T+ T +RAPEL + + T +IDI+S+GC+F +L+ GK+
Sbjct: 187 TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS-----KGKH--- 238
Query: 239 QLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 298
P R R + S+ + K + A L+ +M+
Sbjct: 239 -------------PFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMID 281
Query: 299 FEPKDRPTAEEALADPYF 316
+P RPTA + L P F
Sbjct: 282 HDPLKRPTAMKVLRHPLF 299
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 26 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 81
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 82 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 135
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 136 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT-------- 187
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 188 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 223
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 18 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 73
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 74 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 127
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 128 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT-------- 179
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 180 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 215
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 208
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 209 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 247
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ G+ +I N HRDL+ NIL
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 159 ANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ TA I WT APE + +T
Sbjct: 143 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 191
Query: 212 IDIWSIGCIFAELLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 192 SDVWSFGILLTEIVTHGRIPYPG 214
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 17/205 (8%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXX--XXXXXXXXXXHPDIVEIK 88
+G+G +GVV Y T VA+KK+ + + ++ H ++VE
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE-- 88
Query: 89 HILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQF---FLYQLLRGLKYIHT 144
L + D+ +V+ M L + D P + G+ ++H
Sbjct: 89 ---LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF 204
+ HRD+K NIL + KI DFGLAR A + V T Y APE +
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVMXXRIVGTTAYMAPE---AL 201
Query: 205 FSKYTPAIDIWSIGCIFAELLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 202 RGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ G+ +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ TA I WT APE + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 190
Query: 212 IDIWSIGCIFAELLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPG 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 88/210 (41%), Gaps = 15/210 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDI 84
++I +G G++G V A + TG A K I E + HP I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYI 70
Query: 85 VEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYI 142
V+ LL + K ++++ E I D LT Q Q+L L ++
Sbjct: 71 VK----LLGAYYHDGK-LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 125
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H+ + HRDLK N+L + +++ DFG V+ + T ++ T ++ APE+
Sbjct: 126 HSKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPEVVM 182
Query: 203 SFFSKYTP---AIDIWSIGCIFAELLTGKP 229
K TP DIWS+G E+ +P
Sbjct: 183 CETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y APE+ S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPEIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + ++ G P F
Sbjct: 216 NKAVDWWALGVLIYQMAAGYPPF 238
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 73
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 74 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 184 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 16/226 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + + +A+K + E HP+
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 84 IVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + + + K IY++ E +L++ ++ + + F+ +L L Y
Sbjct: 77 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 131
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A ++ T Y PE+
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-----PSLRRRXMCGTLDYLPPEMIE 186
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLF--PGKNVVHQLDIMTDL 246
+ +D+W G + E L G P F P H+ + DL
Sbjct: 187 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL 230
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 78
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 79 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 189 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 22/119 (18%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFW 186
Q+ G+ Y+ N HRDL+ NIL + K+ DFGL R+ ++ TA I W
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG---KNVVHQLD 241
T APE + + ++T D+WS G + EL T G+ +PG + V+ Q++
Sbjct: 349 T---------APE--AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 396
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQL RG++Y+ + HRDL +N+L + ++I DFGLAR N +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 78
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 79 LLGVCTRE-PPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 189 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 201
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 202 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 240
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 16/226 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + + +A+K + E HP+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 84 IVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + + + K IY++ E +L++ ++ + + F+ +L L Y
Sbjct: 76 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A ++ T Y PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-----PSLRRRXMCGTLDYLPPEMIE 185
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLF--PGKNVVHQLDIMTDL 246
+ +D+W G + E L G P F P H+ + DL
Sbjct: 186 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL 229
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 255
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F +Q+ +G++Y+ + HRDL +NIL K+KI DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 96/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 73
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 74 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 184 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 22 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 77
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 78 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 131
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 132 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT-------- 183
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 184 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 14/205 (6%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
I+E IG GS+G V A G VA+K + + H HP+IV
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA 145
+ P Y+ + LH+ A + L Y + +G+ Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 146 N--VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA--TRWYRAPELC 201
N + HRDLK N+L + +K+CDFGL+R+ + F A T + APE+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLK-----ASXFLXSKXAAGTPEWMAPEVL 211
Query: 202 GSFFSKYTPAIDIWSIGCIFAELLT 226
S D++S G I EL T
Sbjct: 212 RDEPSNEKS--DVYSFGVILWELAT 234
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 91/219 (41%), Gaps = 32/219 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIV 85
K+ E +G G +G V Y KVA+K + + H +V
Sbjct: 21 KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRLV 76
Query: 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYI 142
+ ++ + IY++ E ME+ L +K + LT Q+ G+ +I
Sbjct: 77 RLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 130
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWY 195
N HRDL+ NIL + KI DFGLAR+ ++ TA I WT
Sbjct: 131 EERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT-------- 182
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
APE + +T D+WS G + E++T G+ +PG
Sbjct: 183 -APEAIN--YGTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 78
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 79 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT---------APES 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 189 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 123 LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182
LT Q Q L L Y+H + HRDLK NIL D +K+ DFG V+ +T T
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRT 161
Query: 183 AIFWTD-YVATRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAELLTGKP 229
I D ++ T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 162 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 74
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 75 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT---------APES 184
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 185 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 34/221 (15%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 53
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 54 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227
TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 167 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
YQ+ RG++Y+ + HRDL +N+L D +KI DFGLAR + +
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 257
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 258 KWM-APE--ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPG 296
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 116/311 (37%), Gaps = 71/311 (22%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHP 82
S+Y++ ++G G +G V S VAIK + + +SD
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEK--DRISDWGELPNGTR-------- 53
Query: 83 DIVEIKHILLPPSRREFKDIYVVFELME---------------SDLHQVIKANDDLTPEH 127
V ++ +LL F + + + E DL I L E
Sbjct: 54 --VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEEL 111
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFNDTPTAIFW 186
+ F +Q+L +++ H V HRD+K +NIL + + +LK+ DFG + DT +
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VY 166
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246
TD+ TR Y PE + + + +WS+G + +++ G F H +I+
Sbjct: 167 TDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIPFE-----HDEEII--- 217
Query: 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT 306
+ + F Q+ L+ LA P DRPT
Sbjct: 218 --------------------------RGQVFFRQRVSXE---CQHLIRWCLALRPSDRPT 248
Query: 307 AEEALADPYFK 317
EE P+ +
Sbjct: 249 FEEIQNHPWMQ 259
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 16/226 (7%)
Query: 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPD 83
+ I +GKG +G V A + + +A+K + E HP+
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 84 IVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142
I+ + + + K IY++ E +L++ ++ + + F+ +L L Y
Sbjct: 76 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LKI DFG + A ++ T Y PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-----PSLRRRXMCGTLDYLPPEMIE 185
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLF--PGKNVVHQLDIMTDL 246
+ +D+W G + E L G P F P H+ + DL
Sbjct: 186 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL 229
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ G+ +I N HRDL+ NIL
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 159 ANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ TA I WT APE + +T
Sbjct: 137 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 185
Query: 212 IDIWSIGCIFAELLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 186 SDVWSFGILLTEIVTHGRIPYPG 208
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 78
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 79 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 189 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ G+ +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ TA I WT APE + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 190
Query: 212 IDIWSIGCIFAELLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPG 213
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
Q+ +G+ YIH+ + HRDLKP NI ++KI DFGL ND T T
Sbjct: 144 QITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR----TRSKGTL 199
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
Y +PE S Y +D++++G I AELL
Sbjct: 200 RYMSPEQISS--QDYGKEVDLYALGLILAELL 229
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 75
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 76 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT---------APES 185
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 186 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 71
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 72 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT---------APES 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
++K++ D+W+ G + E+ T G +PG
Sbjct: 182 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 4/93 (4%)
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
G+ ++H + HRD+K NIL + KI DFGLAR A + + V T Y
Sbjct: 135 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVXXSRIVGTTAYX 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGKP 229
APE + + TP DI+S G + E++TG P
Sbjct: 194 APE---ALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA--------RVAFNDTPTAIF 185
Q RG+ Y+H ++ HRDLK NI + D +KI DFGLA F +I
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ S Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 188 WM---------APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G+ SP+ +++VR+ ++ +R ++ KKK
Sbjct: 239 G-RGSLSPD-LSKVRSNCPKRMKRLMAECLKKK 269
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA--------RVAFNDTPTAIF 185
Q RG+ Y+H ++ HRDLK NI + D +KI DFGLA F +I
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 187
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ S Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 188 WM---------APEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G+ SP+ +++VR+ ++ +R ++ KKK
Sbjct: 239 G-RGSLSPD-LSKVRSNCPKRMKRLMAECLKKK 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ G+ +I N HRDL+ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 159 ANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ + TA I WT APE + +T
Sbjct: 142 VSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT---------APEAIN--YGTFTIK 190
Query: 212 IDIWSIGCIFAELLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYPG 213
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 19/214 (8%)
Query: 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS----DATXXXXXXXXXXXXXHPDIV 85
V+G+G++G V A + AIKKI E +S + + +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 86 EIKHILLPPSRREFKD-IYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYI 142
E ++ + P + + K +++ E E+ L+ +I + N + + Y Q+L L YI
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYI 132
Query: 143 HTANVFHRDLKPKNILANADCKLKICDFGLARVAF-----------NDTPTAIFWTDYVA 191
H+ + HR+LKP NI + +KI DFGLA+ N ++ T +
Sbjct: 133 HSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
T Y A E+ Y ID +S+G IF E +
Sbjct: 193 TAXYVATEVLDG-TGHYNEKIDXYSLGIIFFEXI 225
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 75
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 76 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 185
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 186 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 86
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 87 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 196
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 197 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 238
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 77
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 78 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 187
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 188 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 229
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 75
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 76 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 185
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 186 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 78
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 79 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 189 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 73
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 74 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 184 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 9/143 (6%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
+RDLKP+N+L + +++ DFG A+ T W T Y AP + S Y
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTPEYLAPAIILS--KGY 215
Query: 209 TPAIDIWSIGCIFAELLTGKPLF 231
A+D W++G + E+ G P F
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160
+YV L+ DL ++ L P + Q+ L H A HRD+KP+NIL +
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI 220
AD + DFG+A ++ T + T V T +Y APE + Y DI+++ C+
Sbjct: 169 ADDFAYLVDFGIASATTDEKLTQLGNT--VGTLYYXAPERFSESHATYRA--DIYALTCV 224
Query: 221 FAELLTGKPLFPGKNV 236
E LTG P + G +
Sbjct: 225 LYECLTGSPPYQGDQL 240
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 91/214 (42%), Gaps = 30/214 (14%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G +G V + VA+K + E + HP++V+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 71
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + +++ + Q+ ++Y+ N
Sbjct: 72 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT---------APES 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
++K++ D+W+ G + E+ T G +PG
Sbjct: 182 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 75 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLS 126
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 184
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 185 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 227
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 228 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ-- 270
Query: 316 FKGLAKVEREPSAQ 329
L+ + E AQ
Sbjct: 271 ---LSTILEEEKAQ 281
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 73 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLAS--LILYAYQLS 124
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 182
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 183 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 225
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 226 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ-- 268
Query: 316 FKGLAKVEREPSAQ 329
L+ + E AQ
Sbjct: 269 ---LSTILEEEKAQ 279
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 72 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLS 123
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 181
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 182 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 224
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 225 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ-- 267
Query: 316 FKGLAKVEREPSAQ 329
L+ + E AQ
Sbjct: 268 ---LSTILEEEKAQ 278
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 73
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 74 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HRDL +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 183
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 184 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 70 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLS 121
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTXXKASKGKLPIKWM- 179
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 180 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 222
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 223 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 96/226 (42%), Gaps = 34/226 (15%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V++ +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 91 LL--PPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTA 145
PP Y++ E M +L ++ + +++ + Q+ ++Y+
Sbjct: 285 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAP 198
N HR+L +N L + +K+ DFGL+R+ DT TA I WT AP
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------AP 388
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
E ++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 389 ESLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 98 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLS 149
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 207
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 208 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 250
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 251 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ-- 293
Query: 316 FKGLAKVEREPSAQ 329
L+ + E AQ
Sbjct: 294 ---LSTILEEEKAQ 304
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 89/221 (40%), Gaps = 24/221 (10%)
Query: 14 DFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXX 73
DF+ GE +G G++G V A + T A K I+ E +
Sbjct: 37 DFWEIIGE---------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEI 85
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD--LTPEHYQFF 131
HP+IV+ LL E +++++ E + + LT Q
Sbjct: 86 DILASCDHPNIVK----LLDAFYYE-NNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
Q L L Y+H + HRDLK NIL D +K+ DFG V+ +T ++
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRXIQRRDSFIG 197
Query: 192 TRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAELLTGKP 229
T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 23/238 (9%)
Query: 22 GSRYKIE-------EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXX 74
G RY+ E +G G+ G V +TG +A+K++ +
Sbjct: 17 GQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDV 76
Query: 75 XXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEH-YQFFLY 133
P IV+ + + D+++ ELM + ++ K PE
Sbjct: 77 VLKSHDCPYIVQCFGTFITNT-----DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTV 131
Query: 134 QLLRGLKYIHTAN-VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
+++ L Y+ + V HRD+KP NIL + ++K+CDFG++ +D
Sbjct: 132 AIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK----DRSAGC 187
Query: 193 RWYRAPELC---GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247
Y APE Y D+WS+G EL TG+ FP KN +++T +L
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKTDFEVLTKVL 243
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 47/237 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 450 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLAS--LILYAYQLS 501
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +A +K+ DFGL+R D+ + +W
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 559
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 560 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 602
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 603 GRIEN----------GERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 21/149 (14%)
Query: 90 ILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVF 148
+ L S ++ ++Y+V E + ++ ++ + H +F+ Q++ +Y+H+ ++
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 149 HRDLKPKNILANADCKLKICDFGLAR------VAFNDTPTAIFWTDYVATRWYRAPELCG 202
+RDLKP+N+L + +++ DFG A+ TP A+ APE+
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEAL------------APEIIL 211
Query: 203 SFFSKYTPAIDIWSIGCIFAELLTGKPLF 231
S Y A+D W++G + E+ G P F
Sbjct: 212 S--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161
IY+V E DL+ +K + P + + +L + IH + H DLKP N L
Sbjct: 103 IYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-V 161
Query: 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELC---------GSFFSKYTPAI 212
D LK+ DFG+A D + V T Y PE G SK +P
Sbjct: 162 DGMLKLIDFGIANQMQPDXXXVVK-DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 213 DIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272
D+WS+GCI + GK P + +++Q+ + ++ P+ E
Sbjct: 221 DVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNHEI------------------ 259
Query: 273 KKPIPFSQKFPNANPLALR-LLERMLAFEPKDRPTAEEALADPYFK 317
+FP+ L+ +L+ L +PK R + E LA PY +
Sbjct: 260 --------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 124/325 (38%), Gaps = 47/325 (14%)
Query: 7 KKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSD 65
+ SS D T + ++I +GKG +G V A + ++ VA+K + E
Sbjct: 7 ENSSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV 66
Query: 66 ATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLT 124
HP+I+ + + R IY++ E +L++ ++ +
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRR-----IYLILEYAPRGELYKELQKSCTFD 121
Query: 125 PEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184
+ + +L L Y H V HRD+KP+N+L +LKI DFG + A ++
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHA-----PSL 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
T Y PE+ + +D+W IG + ELL G P F +
Sbjct: 177 RRKTMCGTLDYLPPEMIEG--RMHNEKVDLWCIGVLCYELLVGNPPFESAS--------- 225
Query: 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPL-ALRLLERMLAFEPKD 303
NE RR + KFP + P A L+ ++L P +
Sbjct: 226 --------------HNETYRRI---------VKVDLKFPASVPTGAQDLISKLLRHNPSE 262
Query: 304 RPTAEEALADPYFKGLAKVEREPSA 328
R + A P+ + ++ PSA
Sbjct: 263 RLPLAQVSAHPWVRANSRRVLPPSA 287
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 104/254 (40%), Gaps = 52/254 (20%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 67 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLS 118
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 176
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 177 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 219
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 220 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ-- 262
Query: 316 FKGLAKVEREPSAQ 329
L+ + E AQ
Sbjct: 263 ---LSTILEEEKAQ 273
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 89/221 (40%), Gaps = 24/221 (10%)
Query: 14 DFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXX 73
DF+ GE +G G++G V A + T A K I+ E +
Sbjct: 37 DFWEIIGE---------LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE--ELEDYMVEI 85
Query: 74 XXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDD--LTPEHYQFF 131
HP+IV+ LL E +++++ E + + LT Q
Sbjct: 86 DILASCDHPNIVK----LLDAFYYE-NNLWILIEFCAGGAVDAVMLELERPLTESQIQVV 140
Query: 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVA 191
Q L L Y+H + HRDLK NIL D +K+ DFG V+ +T ++
Sbjct: 141 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRXIQRRDXFIG 197
Query: 192 TRWYRAPELCGSFFSK---YTPAIDIWSIGCIFAELLTGKP 229
T ++ APE+ SK Y D+WS+G E+ +P
Sbjct: 198 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 277
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 278 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HR+L +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 387
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 388 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 429
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 67/143 (46%), Gaps = 22/143 (15%)
Query: 102 IYVVFELMES-DLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158
IY++ E ME+ L +K + LT Q+ G+ +I N HR+L+ NIL
Sbjct: 78 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANIL 137
Query: 159 ANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPELCGSFFSKYTPA 211
+ KI DFGLAR+ ++ TA I WT APE + +T
Sbjct: 138 VSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT---------APEAIN--YGTFTIK 186
Query: 212 IDIWSIGCIFAELLT-GKPLFPG 233
D+WS G + E++T G+ +PG
Sbjct: 187 SDVWSFGILLTEIVTHGRIPYPG 209
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 450 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLAS--LILYAYQLS 501
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 559
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 560 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 602
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 603 GRIEN----------GERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 22/224 (9%)
Query: 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXX 76
E GE R ++ V+ +G + V A D +G + A+K++ E + A
Sbjct: 23 VELGE-LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKK 81
Query: 77 XXXXHPDIVEI---KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFL- 132
HP+IV+ I S + ++ EL + L + +K + P L
Sbjct: 82 LSG-HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 133 --YQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARV-------AFNDTP 181
YQ R ++++H + HRDLK +N+L + +K+CDFG A +++
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQR 200
Query: 182 TAIFWTDYV--ATRWYRAPELCGSFFSKY--TPAIDIWSIGCIF 221
A+ + T YR PE+ +S + DIW++GCI
Sbjct: 201 RALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALGCIL 243
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 95/224 (42%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEIKHI 90
+G G YG V + VA+K + E + HP++V+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQ---- 319
Query: 91 LLPPSRREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANV 147
LL RE Y++ E M +L ++ + ++ + Q+ ++Y+ N
Sbjct: 320 LLGVCTRE-PPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA-------IFWTDYVATRWYRAPEL 200
HR+L +N L + +K+ DFGL+R+ DT TA I WT APE
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---------APES 429
Query: 201 CGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243
++K++ D+W+ G + E+ T G +PG ++ +++
Sbjct: 430 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 471
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 47/237 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 70 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQLS 121
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +A +K+ DFGL+R D+ + +W
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 179
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 180 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 222
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 223 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 70 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLS 121
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 179
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 180 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 222
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 223 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 139/349 (39%), Gaps = 64/349 (18%)
Query: 25 YKIEEVIGKGSYG-VVCSAYDTRTG--EKVAIKKINDIFEHVSDATXXXXXXXXXXXXXH 81
+KIE+ IG+G++ V + + G EK+A+K + + A
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGG---Q 79
Query: 82 PDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKY 141
+++ +K+ K+ +VV + + + + L+ + + ++ L + LK
Sbjct: 80 DNVMGVKYCFR-------KNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKR 132
Query: 142 IHTANVFHRDLKPKNILANADCK-LKICDFGLA---------------------RVAFND 179
IH + HRD+KP N L N K + DFGLA R + N
Sbjct: 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 180 TPTAIFWTDYVATR----WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGK 234
+ VA R +RAPE+ ++ T AID+WS G IF LL+G+ P +
Sbjct: 193 CSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ-TTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 235 NVVHQLDIMTDLLGTPSPEAIARVRNE--------------KARRYLSSMRKKKPIPFSQ 280
+ + L + + G+ A+ + K L M P S
Sbjct: 252 DDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSD 311
Query: 281 KFPNANPL---------ALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320
+A L A LL+++L P R TAEEAL P+FK ++
Sbjct: 312 IQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 119 ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178
AN L+ F Q+ +G+ ++ + N HRD+ +N+L KI DFGLAR N
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
D+ + + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 217 DSNYIVKGNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELME----SDLHQVIKANDDLTPEHYQFFLYQLL 136
HP IV++ ++ ++++ EL QV K + DL + YQL
Sbjct: 70 HPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQLS 121
Query: 137 RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
L Y+ + HRD+ +N+L +++ +K+ DFGL+R D+ + +W
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKWM- 179
Query: 197 APELCGSFFSKYTPAIDIWSIG-CIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
APE F ++T A D+W G C++ L+ G F G + + I
Sbjct: 180 APESIN--FRRFTSASDVWMFGVCMWEILMHGVKPFQ---------------GVKNNDVI 222
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312
R+ N ++ P+P PN P L+ + A++P RP E A
Sbjct: 223 GRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 67/318 (21%)
Query: 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPDIVEI 87
E+++G GS G V + G VA+K++ F ++ HP+++
Sbjct: 20 EKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA----LMEIKLLTESDDHPNVIRY 74
Query: 88 KHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF--------FLYQLLRGL 139
S + +Y+ EL +L ++++ + ++ E+ + L Q+ G+
Sbjct: 75 Y-----CSETTDRFLYIALELCNLNLQDLVESKN-VSDENLKLQKEYNPISLLRQIASGV 128
Query: 140 KYIHTANVFHRDLKPKNILANA-------------DCKLKICDFGLARVAFNDTPTAIFW 186
++H+ + HRDLKP+NIL + + ++ I DFGL + D+ F
Sbjct: 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFR 186
Query: 187 TDY---VATRWYRAPELCGSFFS-----KYTPAIDIWSIGCIFAELLTGKPLFPGKNVVH 238
+ T +RAPEL + + T +IDI+S+GC+F +L+ GK+
Sbjct: 187 XNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS-----KGKH--- 238
Query: 239 QLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLA 298
P R R + S+ + K + A L+ +M+
Sbjct: 239 -------------PFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMID 281
Query: 299 FEPKDRPTAEEALADPYF 316
+P RPTA + L P F
Sbjct: 282 HDPLKRPTAMKVLRHPLF 299
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 120/316 (37%), Gaps = 78/316 (24%)
Query: 25 YKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
YK+ +V+G G G V ++ RT EK A+K + D + + P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------PH 72
Query: 84 IVEIKHIL--LPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRG 138
IV I + L R K + +V E ++ +L I+ D T + +
Sbjct: 73 IVRIVDVYENLYAGR---KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 139 LKYIHTANVFHRDLKPKNILANA---DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWY 195
++Y+H+ N+ HRD+KP+N+L + + LK+ DFG A+
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------------------- 168
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255
E G KY + D+WS+G I LL G P F H L I SP
Sbjct: 169 ---ETTG---EKYDKSCDMWSLGVIMYILLCGYPPFYSN---HGLAI--------SPGMK 211
Query: 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPN-----ANPLALRLLERMLAFEPKDRPTAEEA 310
R+R + +FPN + L+ +L EP R T E
Sbjct: 212 TRIRMGQY-----------------EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 254
Query: 311 LADPYFKGLAKVEREP 326
+ P+ KV + P
Sbjct: 255 MNHPWIMQSTKVPQTP 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 198
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 199 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 249
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 250 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 280
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 199
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 200 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 251 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 281
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 177 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 228 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 258
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 117 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 176
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 177 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 227
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 228 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 258
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 114 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 173
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 174 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 224
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 225 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 255
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 172 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 223 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 253
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV--------AFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA V F +I
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL 171
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 172 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 223 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 253
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 95/232 (40%), Gaps = 39/232 (16%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
+ Y + +G+G + V G A+K+I + D
Sbjct: 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQREADMHRLFN 84
Query: 81 HPDIVEI----------KH---ILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEH 127
HP+I+ + KH +LLP +R + +++ ++ + LT +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRG---------TLWNEIERLKDKGNFLTEDQ 135
Query: 128 YQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG---LARVAFNDTPTAI 184
+ L + RGL+ IH HRDLKP NIL + + + D G A + + A+
Sbjct: 136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 185 FWTDYVATRW---YRAPELCGSFFSKYTPAI-----DIWSIGCIFAELLTGK 228
D+ A R YRAPEL FS + + D+WS+GC+ ++ G+
Sbjct: 196 TLQDWAAQRCTISYRAPEL----FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV---------AFNDT 180
F Q+ G+ Y+H + HRDL +N+L + D +KI DFGLA+ D
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDG 197
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ +FW APE + K+ A D+WS G ELLT
Sbjct: 198 DSPVFWY---------APECLKEY--KFYYASDVWSFGVTLYELLT 232
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDI 84
K+ + IGKG +G V D R G KVA+K I ND + A H ++
Sbjct: 24 KLLQTIGKGEFGDVMLG-DYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNL 76
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKY 141
V++ +++ E +Y+V E M + L +++ L + F + ++Y
Sbjct: 77 VQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAP 198
+ N HRDL +N+L + D K+ DFGL + A + T + WT AP
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------AP 183
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GK---PLFPGKNVV 237
E K++ D+WS G + E+ + G+ P P K+VV
Sbjct: 184 EALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQ----FFLYQLLRGLKYIHTANVFHRDLKPK 155
D+ +V +M D+ I D+ P + F+ Q++ GL+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + D ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAELLTGKPLFPGKN 235
+++G E++ + F +
Sbjct: 373 FALGVTLYEMIAARGPFRARG 393
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQ----FFLYQLLRGLKYIHTANVFHRDLKPK 155
D+ +V +M D+ I D+ P + F+ Q++ GL+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + D ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAELLTGKPLFPGKN 235
+++G E++ + F +
Sbjct: 373 FALGVTLYEMIAARGPFRARG 393
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQ----FFLYQLLRGLKYIHTANVFHRDLKPK 155
D+ +V +M D+ I D+ P + F+ Q++ GL+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + D ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAELLTGKPLFPGKN 235
+++G E++ + F +
Sbjct: 373 FALGVTLYEMIAARGPFRARG 393
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 44/207 (21%)
Query: 112 DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDF 170
DL I L E + F +Q+L +++ H V HRD+K +NIL + + +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL 230
G + DT +TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 203 G-SGALLKDT----VYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCGDIP 256
Query: 231 FPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLAL 290
F H +I+ + + F Q+ +
Sbjct: 257 FE-----HDEEII-----------------------------RGQVFFRQRVSSE---CQ 279
Query: 291 RLLERMLAFEPKDRPTAEEALADPYFK 317
L+ LA P DRPT EE P+ +
Sbjct: 280 HLIRWCLALRPSDRPTFEEIQNHPWMQ 306
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEK----VAIKKIND-----IFEHVSDATXXXXXXXXXXXX 79
+V+G G +G V GE V IK I D F+ V+D
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD------HMLAIGSL 90
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGL 139
H IV + L P S + Y+ + S L V + L P+ + Q+ +G+
Sbjct: 91 DHAHIVRLLG-LCPGSSLQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 146
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
Y+ + HR+L +N+L + ++++ DFG+A + D ++ +W
Sbjct: 147 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 206
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ F KYT D+WS G EL+T
Sbjct: 207 I---HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%), Gaps = 12/141 (8%)
Query: 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQ----FFLYQLLRGLKYIHTANVFHRDLKPK 155
D+ +V +M D+ I D+ P + F+ Q++ GL+++H N+ +RDLKP+
Sbjct: 259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPE 318
Query: 156 NILANADCKLKICDFGLA-RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDI 214
N+L + D ++I D GLA + T T Y T + APEL +Y ++D
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKT----KGYAGTPGFMAPELL--LGEEYDFSVDY 372
Query: 215 WSIGCIFAELLTGKPLFPGKN 235
+++G E++ + F +
Sbjct: 373 FALGVTLYEMIAARGPFRARG 393
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 85/207 (41%), Gaps = 22/207 (10%)
Query: 29 EVIGKGSYGVVCSAYDTRTGEK----VAIKKIND-----IFEHVSDATXXXXXXXXXXXX 79
+V+G G +G V GE V IK I D F+ V+D
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTD------HMLAIGSL 72
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGL 139
H IV + L P S + Y+ + S L V + L P+ + Q+ +G+
Sbjct: 73 DHAHIVRLLG-LCPGSSLQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128
Query: 140 KYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199
Y+ + HR+L +N+L + ++++ DFG+A + D ++ +W
Sbjct: 129 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALES 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ F KYT D+WS G EL+T
Sbjct: 189 I---HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDI 84
K+ + IGKG +G V D R G KVA+K I ND + A H ++
Sbjct: 196 KLLQTIGKGEFGDVMLG-DYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNL 248
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKY 141
V++ +++ E +Y+V E M + L +++ L + F + ++Y
Sbjct: 249 VQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAP 198
+ N HRDL +N+L + D K+ DFGL + A + T + WT AP
Sbjct: 305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------AP 355
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GK---PLFPGKNVV 237
E K++ D+WS G + E+ + G+ P P K+VV
Sbjct: 356 EALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 396
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 6/127 (4%)
Query: 102 IYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159
IY+V E + + L+ + L P Y + G+ ++ + HRDL +N L
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV 137
Query: 160 NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+ D +K+ DFG+ R +D + T + +W APE+ F KY+ D+W+ G
Sbjct: 138 DRDLCVKVSDFGMTRYVLDDQYVSSVGTKF-PVKW-SAPEVFHYF--KYSSKSDVWAFGI 193
Query: 220 IFAELLT 226
+ E+ +
Sbjct: 194 LMWEVFS 200
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDI 84
K+ + IGKG +G V D R G KVA+K I ND + A H ++
Sbjct: 9 KLLQTIGKGEFGDVMLG-DYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNL 61
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKY 141
V++ +++ E +Y+V E M + L +++ L + F + ++Y
Sbjct: 62 VQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAP 198
+ N HRDL +N+L + D K+ DFGL + A + T + WT AP
Sbjct: 118 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------AP 168
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GK---PLFPGKNVV 237
E K++ D+WS G + E+ + G+ P P K+VV
Sbjct: 169 EALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV---------AFNDT 180
F Q+ G+ Y+H+ + HR+L +N+L + D +KI DFGLA+ D
Sbjct: 121 LFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ +FW APE + K+ A D+WS G ELLT
Sbjct: 181 DSPVFWY---------APECLKEY--KFYYASDVWSFGVTLYELLT 215
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 4/116 (3%)
Query: 119 ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178
AN + F Q+ +G+ ++ + N HRD+ +N+L KI DFGLAR N
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 216
Query: 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
D+ + + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 217 DSNYIVKGNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F Q+ +G+ ++ + N HRD+ +N+L KI DFGLAR ND+ + +
Sbjct: 171 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ + G +PG
Sbjct: 231 PVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F Q+ +G+ ++ + N HRD+ +N+L KI DFGLAR ND+ + +
Sbjct: 165 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ + G +PG
Sbjct: 225 PVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV---------AFNDT 180
F Q+ G+ Y+H + HR+L +N+L + D +KI DFGLA+ D
Sbjct: 121 LFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ +FW APE + K+ A D+WS G ELLT
Sbjct: 181 DSPVFWY---------APECLKEY--KFYYASDVWSFGVTLYELLT 215
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA--------RVAFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA F +I
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 199
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 200 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 250
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 251 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 281
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA--------RVAFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA F +I
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 191
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 192 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 242
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 243 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 273
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 106 FELMESDLHQVIKANDD------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159
F +M S V +DD L P + + Q+ G++Y+ + +V H+DL +N+L
Sbjct: 119 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 178
Query: 160 NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+KI D GL R + + + RW APE + K++ DIWS G
Sbjct: 179 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW-MAPE--AIMYGKFSIDSDIWSYGV 235
Query: 220 IFAELLT 226
+ E+ +
Sbjct: 236 VLWEVFS 242
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F Q+ +G+ ++ + N HRD+ +N+L KI DFGLAR ND+ + +
Sbjct: 157 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ + G +PG
Sbjct: 217 PVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
Q+ +G+ YIH+ + +RDLKP NI ++KI DFGL ND T
Sbjct: 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRX----RSKGTL 185
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225
Y +PE S Y +D++++G I AELL
Sbjct: 186 RYMSPEQISS--QDYGKEVDLYALGLILAELL 215
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
F Q+ +G+ ++ + N HRD+ +N+L KI DFGLAR ND+ + +
Sbjct: 163 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 222
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+W APE F YT D+WS G + E+ + G +PG
Sbjct: 223 PVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 33/223 (14%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKI-NDIFEHVSDATXXXXXXXXXXXXXHPDI 84
K+ + IGKG +G V D R G KVA+K I ND + A H ++
Sbjct: 15 KLLQTIGKGEFGDVMLG-DYR-GNKVAVKCIKND-----ATAQAFLAEASVMTQLRHSNL 67
Query: 85 VEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKY 141
V++ +++ E +Y+V E M + L +++ L + F + ++Y
Sbjct: 68 VQLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 142 IHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA---IFWTDYVATRWYRAP 198
+ N HRDL +N+L + D K+ DFGL + A + T + WT AP
Sbjct: 124 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT---------AP 174
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAELLT-GK---PLFPGKNVV 237
E + ++ D+WS G + E+ + G+ P P K+VV
Sbjct: 175 EALRE--AAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA--------RVAFNDTPTAIF 185
Q +G+ Y+H ++ HRDLK NI + D +KI DFGLA F +I
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL 171
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244
W APE+ + Y+ D+++ G + EL+TG+ + N Q+ M
Sbjct: 172 WM---------APEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMV 222
Query: 245 DLLGTPSPEAIARVRN---EKARRYLSSMRKKK 274
G SP+ +++VR+ + +R ++ KKK
Sbjct: 223 G-RGYLSPD-LSKVRSNCPKAMKRLMAECLKKK 253
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 79 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 193 ESI---LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 9/127 (7%)
Query: 106 FELMESDLHQVIKANDD------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159
F +M S V +DD L P + + Q+ G++Y+ + +V H+DL +N+L
Sbjct: 102 FLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV 161
Query: 160 NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219
+KI D GL R + + + RW APE + K++ DIWS G
Sbjct: 162 YDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRW-MAPE--AIMYGKFSIDSDIWSYGV 218
Query: 220 IFAELLT 226
+ E+ +
Sbjct: 219 VLWEVFS 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 76 DNPHVCRLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 190 ESILHRI---YTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 103/289 (35%), Gaps = 46/289 (15%)
Query: 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-ATXXXXXXXXXXXXXHPDIVEIKH 89
+G GSYG V G A+K+ F D A HP V ++
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 90 ILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQF-FLYQLLRGLKYIHTANVF 148
+ E +Y+ EL L Q +A PE + +L L L ++H+ +
Sbjct: 125 -----AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179
Query: 149 HRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKY 208
H D+KP NI + K+ DFGL + TA Y APEL Y
Sbjct: 180 HLDVKPANIFLGPRGRCKLGDFGL----LVELGTAGAGEVQEGDPRYMAPEL---LQGSY 232
Query: 209 TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLS 268
A D++S+G E+ L G QL G PE A + +E
Sbjct: 233 GTAADVFSLGLTILEVACNMELPHGGEGWQQLRQ-----GYLPPEFTAGLSSE------- 280
Query: 269 SMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317
+R +L ML +PK R TAE LA P +
Sbjct: 281 -LRS-------------------VLVMMLEPDPKLRATAEALLALPVLR 309
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 127/342 (37%), Gaps = 55/342 (16%)
Query: 21 EGSRYKIEEVIGKG--SYGVVCSAYDTRTGEKVAIKKINDIFEHVSD--ATXXXXXXXXX 76
EG Y++ VIGKG V A TGE V +++IN E S+ T
Sbjct: 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN--LEACSNEMVTFLQGELHVS 80
Query: 77 XXXXHPDIVEIKHILLPPSRREF---KDIYVVFELMESDLHQVIKANDDLTPEHYQ---- 129
HP+IV P R F +++VV M + DL H+
Sbjct: 81 KLFNHPNIV--------PYRATFIADNELWVVTSFM------AYGSAKDLICTHFMDGMN 126
Query: 130 -----FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF--GLARVAFNDTPT 182
+ L +L+ L YIH HR +K +IL + D K+ + L+ ++
Sbjct: 127 ELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR 186
Query: 183 AI--FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
+ F V + +PE+ Y DI+S+G EL G P K++
Sbjct: 187 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH--VPFKDMPATQ 244
Query: 241 DIMTDLLGT----------PSPEAIARVRNEKARRYLS-SMRKKKPIPFSQKFPNA---- 285
++ L GT P+ E A LS S+ P P + P+
Sbjct: 245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 304
Query: 286 --NPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVERE 325
+P +E+ L P RP+A L +FK + + E
Sbjct: 305 TFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASE 346
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 127/342 (37%), Gaps = 55/342 (16%)
Query: 21 EGSRYKIEEVIGKG--SYGVVCSAYDTRTGEKVAIKKINDIFEHVSD--ATXXXXXXXXX 76
EG Y++ VIGKG V A TGE V +++IN E S+ T
Sbjct: 7 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRIN--LEACSNEMVTFLQGELHVS 64
Query: 77 XXXXHPDIVEIKHILLPPSRREF---KDIYVVFELMESDLHQVIKANDDLTPEHYQ---- 129
HP+IV P R F +++VV M + DL H+
Sbjct: 65 KLFNHPNIV--------PYRATFIADNELWVVTSFM------AYGSAKDLICTHFMDGMN 110
Query: 130 -----FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF--GLARVAFNDTPT 182
+ L +L+ L YIH HR +K +IL + D K+ + L+ ++
Sbjct: 111 ELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQR 170
Query: 183 AI--FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240
+ F V + +PE+ Y DI+S+G EL G P K++
Sbjct: 171 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGH--VPFKDMPATQ 228
Query: 241 DIMTDLLGT----------PSPEAIARVRNEKARRYLS-SMRKKKPIPFSQKFPNA---- 285
++ L GT P+ E A LS S+ P P + P+
Sbjct: 229 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 288
Query: 286 --NPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVERE 325
+P +E+ L P RP+A L +FK + + E
Sbjct: 289 TFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASE 330
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN 156
E + +V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N
Sbjct: 441 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 500
Query: 157 ILANADCKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPA 211
+L KI DFGL++ D T W +WY APE C +++ K++
Sbjct: 501 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSK 553
Query: 212 IDIWSIGCIFAELLT 226
D+WS G + E +
Sbjct: 554 SDVWSFGVLMWEAFS 568
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 76 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 190 ESILHRI---YTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 189 ESILHRI---YTHQSDVWSYGVTVWELMT 214
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN 156
E + +V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N
Sbjct: 440 EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN 499
Query: 157 ILANADCKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPA 211
+L KI DFGL++ D T W +WY APE C +++ K++
Sbjct: 500 VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSK 552
Query: 212 IDIWSIGCIFAELLT 226
D+WS G + E +
Sbjct: 553 SDVWSFGVLMWEAFS 567
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 5/104 (4%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
Q+ G+ Y+ + + HRDL +N L A+ +KI DFG++R ++ + + R
Sbjct: 141 QIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GK-PLFPGKN 235
W PE + K+T D+WS G I E+ T GK P F N
Sbjct: 201 WM-PPE--SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 241
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 102 IYVVFELME-SDLHQVIKAND-------------DLTPEHYQFFLYQLLRGLKYIHTANV 147
+ +VFE M+ DL++ ++A+ +LT Q+ G+ Y+ + +
Sbjct: 90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF 149
Query: 148 FHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK 207
HRDL +N L + +KI DFG++R ++ + + RW PE + K
Sbjct: 150 VHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM-PPE--SIMYRK 206
Query: 208 YTPAIDIWSIGCIFAELLT 226
+T D+WS+G + E+ T
Sbjct: 207 FTTESDVWSLGVVLWEIFT 225
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
L+Q+ G+KY+ N HRDL +N+L KI DFGL++ D ++T
Sbjct: 115 LLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARS 171
Query: 191 ATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
A +W + APE F K++ D+WS G E L+
Sbjct: 172 AGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALS 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 85 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 199 ESILHRI---YTHQSDVWSYGVTVWELMT 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 100 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 153
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 154 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 213
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 214 ESILHRI---YTHQSDVWSYGVTVWELMT 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 82 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 196 ESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 81 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 134
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 135 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 194
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 195 ESI---LHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 189 ESILHRI---YTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 192 ESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 189 ESILHRI---YTHQSDVWSYGVTVWELMT 214
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 92/212 (43%), Gaps = 13/212 (6%)
Query: 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
+G K + IG+GS+ V DT T +VA ++ D S+
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 81 HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGL 139
HP+IV + + + K I +V EL S L +K + + + Q+L+GL
Sbjct: 84 HPNIVRF-YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL 142
Query: 140 KYIHTAN--VFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYR 196
+++HT + HRDLK NI +KI D GLA + A F + T +
Sbjct: 143 QFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL-----KRASFAKAVIGTPEFX 197
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228
APE + KY ++D+++ G E T +
Sbjct: 198 APE---XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 94/225 (41%), Gaps = 28/225 (12%)
Query: 27 IEEVIGKGSYGVVCSA---YDTRTGEKVAIKKIN-------DIFEHVSDATXXXXXXXXX 76
+ +++G+G +G V + T KVA+K + +I E +S+A
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS--- 94
Query: 77 XXXXHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQ-VIKANDDLTPEHYQF---- 130
HP+++ + + + S + V+ M+ DLH ++ + + P+H
Sbjct: 95 ----HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 131 -FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY 189
F+ + G++Y+ N HRDL +N + D + + DFGL++ ++
Sbjct: 151 KFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPG 233
+ +W L YT D+W+ G E+ T G +PG
Sbjct: 211 MPVKWIAIESLADRV---YTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELMESD--LHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 109 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 162
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 163 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 222
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 223 ESILHRI---YTHQSDVWSYGVTVWELMT 248
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF-PVRW-SP 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 190 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAI-KKINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 75 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 189 ESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 38/228 (16%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
K ++VIG+G++G V A + G ++ AIK++ + HP+
Sbjct: 28 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 87
Query: 84 IVEIKHILLPPSRREFKDIYVVFE---------------LMESDLHQVIKAN--DDLTPE 126
I+ ++L R + +Y+ E ++E+D I + L+ +
Sbjct: 88 II---NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTA 183
F + RG+ Y+ HRDL +NIL + KI DFGL+R V T
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 202
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEL--LTGKP 229
+ RW L +S YT D+WS G + E+ L G P
Sbjct: 203 L------PVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 102 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 161
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 162 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 214
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 215 GVLMWEAFS 223
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 38/228 (16%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
K ++VIG+G++G V A + G ++ AIK++ + HP+
Sbjct: 18 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 77
Query: 84 IVEIKHILLPPSRREFKDIYVVFE---------------LMESDLHQVIKAN--DDLTPE 126
I+ ++L R + +Y+ E ++E+D I + L+ +
Sbjct: 78 II---NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTA 183
F + RG+ Y+ HRDL +NIL + KI DFGL+R V T
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 192
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEL--LTGKP 229
+ RW L +S YT D+WS G + E+ L G P
Sbjct: 193 L------PVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 216
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 217 GVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 104 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 163
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 164 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 216
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 217 GVLMWEAFS 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 153
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 154 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 206
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 207 GVLMWEAFS 215
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV---------AFNDT 180
F Q+ G+ Y+H + HR L +N+L + D +KI DFGLA+ D
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ +FW APE K+ A D+WS G ELLT
Sbjct: 176 DSPVFWY---------APECLKE--CKFYYASDVWSFGVTLYELLT 210
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAI-KKINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 69 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 122
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 123 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 182
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 183 ESILHRI---YTHQSDVWSYGVTVWELMT 208
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 134 QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193
Q+ G+ Y+ HRDL +N L + +KI DFGL+R ++ D + R
Sbjct: 182 QVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIR 241
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
W PE F+++YT D+W+ G + E+ +
Sbjct: 242 W-MPPE--SIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 130 FFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV---------AFNDT 180
F Q+ G+ Y+H + HR L +N+L + D +KI DFGLA+ D
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
Query: 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ +FW APE K+ A D+WS G ELLT
Sbjct: 175 DSPVFWY---------APECLKE--CKFYYASDVWSFGVTLYELLT 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 148 HYAKISDFGLSKALRADENXYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 200
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 201 GVLMWEAFS 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 90/214 (42%), Gaps = 14/214 (6%)
Query: 24 RYKIEEVIGKGSYGVVCSAY---DTRTGEKVAIKKINDIFEHVSDATXXXXXXXXXXXXX 80
++ + ++GKG +G V A + + KVA+K + SD
Sbjct: 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD 83
Query: 81 HPDIVEIKHILLPPSRREFKDI-YVVFELME-SDLHQVIKAND------DLTPEHYQFFL 132
HP + ++ + L + I V+ M+ DLH + A+ +L + F+
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFM 143
Query: 133 YQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192
+ G++Y+ + N HRDL +N + D + + DFGL+R ++ +
Sbjct: 144 VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+W L + ++ ++ D+W+ G E++T
Sbjct: 204 KWLALESLADNLYTVHS---DVWAFGVTMWEIMT 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 132 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 189
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 190 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 131 FLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV 190
L+Q+ G+KY+ N HR+L +N+L KI DFGL++ D ++T
Sbjct: 441 LLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARS 497
Query: 191 ATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAELLT 226
A +W + APE F K++ D+WS G E L+
Sbjct: 498 AGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALS 534
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 112 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 169
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 170 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 88 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 147
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 148 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 200
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 201 GVLMWEAFS 209
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 191 ESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 77 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 191 ESILHRI---YTHQSDVWSYGVTVWELMT 216
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 82 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 141
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 142 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 194
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 195 GVLMWEAFS 203
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 69
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 70 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 124 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 184 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 232
Query: 224 LLT 226
+ T
Sbjct: 233 IAT 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 17 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 69
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 70 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 124 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 184 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 232
Query: 224 LLT 226
+ T
Sbjct: 233 IAT 235
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 117 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 174
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 175 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 4 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 56
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 57 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 110
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 111 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 170
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 171 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 219
Query: 224 LLT 226
+ T
Sbjct: 220 IAT 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 123 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 180
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 181 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
++Y+ + HRDL +N L N +K+ DFGL+R +D T+ + + RW
Sbjct: 116 AMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SP 173
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
PE+ +SK++ DIW+ G + E+ +
Sbjct: 174 PEVL--MYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162
+V E+ E L++ ++ N + ++ ++Q+ G+KY+ +N HRDL +N+L
Sbjct: 84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ 143
Query: 163 CKLKICDFGLARVAFND-----TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 217
KI DFGL++ D T W +WY APE C +++ K++ D+WS
Sbjct: 144 HYAKISDFGLSKALRADENYYKAQTHGKW----PVKWY-APE-CINYY-KFSSKSDVWSF 196
Query: 218 GCIFAELLT 226
G + E +
Sbjct: 197 GVLMWEAFS 205
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 10 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 62
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 63 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 116
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 117 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 177 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 225
Query: 224 LLT 226
+ T
Sbjct: 226 IAT 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAI-KKINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 72 DNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAE 125
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 126 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 185
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 186 ESILHRI---YTHQSDVWSYGVTVWELMT 211
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+ G++G V GEKV I I ++ E S
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 82 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 135
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFGLA++ + V +W
Sbjct: 136 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 195
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 196 ESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 10/146 (6%)
Query: 123 LTPEHYQFFLYQLL-------RGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175
L + +F ++QL+ +G+ Y+H N+ HRD+K NI + +KI DFGLA V
Sbjct: 122 LHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181
Query: 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGK 234
+ + + W APE+ + ++ D++S G + EL+TG+ +
Sbjct: 182 KSRWSGSQQVEQPTGSVLWM-APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
Query: 235 NVVHQLDIMTDLLGTPSPEAIARVRN 260
N Q+ M G SP+ +N
Sbjct: 241 NNRDQIIFMVG-RGYASPDLSKLYKN 265
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 7 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 59
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 60 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 113
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 114 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 173
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 174 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 222
Query: 224 LLT 226
+ T
Sbjct: 223 IAT 225
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 11 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 63
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 64 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 117
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 118 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 177
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 178 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 226
Query: 224 LLT 226
+ T
Sbjct: 227 IAT 229
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 8 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 60
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 61 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 114
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 115 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 174
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 175 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 223
Query: 224 LLT 226
+ T
Sbjct: 224 IAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 95/243 (39%), Gaps = 43/243 (17%)
Query: 3 PDQRKKSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH 62
PD+ + + + E G+GS + E + KG VV +TR VAIK +N+
Sbjct: 10 PDEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETR----VAIKTVNEAASM 62
Query: 63 VSDATXXXXXXXXXXXXXHPDIVEIKHILLPPSRREFKDIYVVFELM-ESDLHQVIKA-- 119
H +V + ++ + + V+ ELM DL +++
Sbjct: 63 RERIEFLNEASVMKEFNCH-HVVRLLGVV-----SQGQPTLVIMELMTRGDLKSYLRSLR 116
Query: 120 -----NDDLTPEHYQFFLY---QLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171
N L P + ++ G+ Y++ HRDL +N + D +KI DFG
Sbjct: 117 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 176
Query: 172 LARVAFNDTPTAIFWTDY--------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAE 223
+ R I+ TDY + RW L F+ Y+ D+WS G + E
Sbjct: 177 MTR--------DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS---DVWSFGVVLWE 225
Query: 224 LLT 226
+ T
Sbjct: 226 IAT 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 85/209 (40%), Gaps = 14/209 (6%)
Query: 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIK-KINDIFEHVSDATXXXXX--XXXXXXX 79
+ +K +V+G G++G V GEKV I I ++ E S
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 80 XHPDIVEIKHILLPPSRREFKDIYVVFELM--ESDLHQVIKANDDLTPEHYQFFLYQLLR 137
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 79 DNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 138 GLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRA 197
G+ Y+ + HRDL +N+L +KI DFG A++ + V +W
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAELLT 226
+ YT D+WS G EL+T
Sbjct: 193 ESILHRI---YTHQSDVWSYGVTVWELMT 218
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 92/228 (40%), Gaps = 38/228 (16%)
Query: 26 KIEEVIGKGSYGVVCSAYDTRTGEKV--AIKKINDIFEHVSDATXXXXXXXXXXXXXHPD 83
K ++VIG+G++G V A + G ++ AIK++ + HP+
Sbjct: 25 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPN 84
Query: 84 IVEIKHILLPPSRREFKDIYVVFE---------------LMESDLHQVIKAN--DDLTPE 126
I+ ++L R + +Y+ E ++E+D I + L+ +
Sbjct: 85 II---NLLGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 127 HYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR---VAFNDTPTA 183
F + RG+ Y+ HR+L +NIL + KI DFGL+R V T
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGR 199
Query: 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEL--LTGKP 229
+ RW L +S YT D+WS G + E+ L G P
Sbjct: 200 L------PVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTP 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,489,512
Number of Sequences: 62578
Number of extensions: 683444
Number of successful extensions: 4706
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1401
Number of HSP's gapped (non-prelim): 1380
length of query: 560
length of database: 14,973,337
effective HSP length: 104
effective length of query: 456
effective length of database: 8,465,225
effective search space: 3860142600
effective search space used: 3860142600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)