Query 008607
Match_columns 560
No_of_seqs 389 out of 2799
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 14:17:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008607.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008607hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0660 Mitogen-activated prot 100.0 4.2E-78 9.2E-83 601.2 25.4 342 17-364 16-357 (359)
2 KOG0593 Predicted protein kina 100.0 2.2E-61 4.8E-66 469.2 17.4 286 23-320 2-291 (396)
3 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.4E-59 1.8E-63 482.1 34.1 338 24-361 1-338 (338)
4 KOG0659 Cdk activating kinase 100.0 3.1E-60 6.7E-65 454.4 21.3 288 23-322 2-290 (318)
5 KOG0661 MAPK related serine/th 100.0 1.5E-60 3.3E-65 487.5 16.0 289 21-320 8-298 (538)
6 KOG0600 Cdc2-related protein k 100.0 5.7E-60 1.2E-64 486.3 19.1 287 22-318 116-405 (560)
7 KOG0663 Protein kinase PITSLRE 100.0 1.7E-59 3.7E-64 461.4 17.8 294 19-320 72-368 (419)
8 KOG0615 Serine/threonine prote 100.0 2.7E-57 5.9E-62 456.6 17.1 262 22-319 171-443 (475)
9 KOG0658 Glycogen synthase kina 100.0 3.1E-56 6.7E-61 445.2 19.7 286 24-323 25-316 (364)
10 KOG0575 Polo-like serine/threo 100.0 3.1E-54 6.8E-59 454.0 25.9 263 22-325 17-281 (592)
11 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-54 2.9E-59 433.9 18.2 292 23-320 11-309 (323)
12 KOG0581 Mitogen-activated prot 100.0 4.9E-53 1.1E-57 423.2 22.1 260 23-320 79-342 (364)
13 KOG0665 Jun-N-terminal kinase 100.0 2.5E-53 5.4E-58 416.3 17.6 343 17-370 11-366 (369)
14 KOG0598 Ribosomal protein S6 k 100.0 1.1E-52 2.5E-57 420.4 22.4 261 19-320 21-288 (357)
15 KOG0667 Dual-specificity tyros 100.0 8.8E-52 1.9E-56 439.8 26.2 284 21-322 184-511 (586)
16 cd07858 STKc_TEY_MAPK_plant Ca 100.0 9.2E-51 2E-55 423.3 31.7 337 19-361 1-337 (337)
17 KOG0592 3-phosphoinositide-dep 100.0 9.6E-52 2.1E-56 428.7 20.6 261 22-320 72-345 (604)
18 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4E-50 8.6E-55 419.1 30.1 330 19-359 11-341 (343)
19 KOG0666 Cyclin C-dependent kin 100.0 4.2E-52 9E-57 405.4 13.8 292 23-319 24-343 (438)
20 cd07849 STKc_ERK1_2_like Catal 100.0 1.8E-49 3.9E-54 413.2 32.0 335 19-357 1-335 (336)
21 cd07853 STKc_NLK Catalytic dom 100.0 3.2E-49 6.9E-54 417.4 33.2 330 24-357 1-350 (372)
22 cd07875 STKc_JNK1 Catalytic do 100.0 5.8E-49 1.3E-53 414.0 34.1 328 20-357 21-361 (364)
23 KOG0595 Serine/threonine-prote 100.0 2.4E-50 5.1E-55 407.0 21.6 258 22-318 9-273 (429)
24 cd07876 STKc_JNK2 Catalytic do 100.0 7.7E-49 1.7E-53 412.3 33.1 295 20-323 18-325 (359)
25 KOG0591 NIMA (never in mitosis 100.0 2.4E-51 5.2E-56 395.7 11.6 259 19-320 15-283 (375)
26 KOG0597 Serine-threonine prote 100.0 1.2E-50 2.6E-55 420.3 17.4 258 23-321 2-259 (808)
27 KOG0583 Serine/threonine prote 100.0 1.7E-49 3.7E-54 416.8 25.9 257 21-318 15-280 (370)
28 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.1E-49 9E-54 401.5 27.7 286 19-316 1-288 (288)
29 KOG0588 Serine/threonine prote 100.0 4.6E-50 1E-54 423.6 21.2 262 21-324 10-274 (786)
30 KOG0616 cAMP-dependent protein 100.0 9.3E-50 2E-54 387.4 19.7 254 23-320 44-304 (355)
31 KOG0662 Cyclin-dependent kinas 100.0 3.8E-50 8.3E-55 364.9 14.8 278 24-319 3-289 (292)
32 KOG0033 Ca2+/calmodulin-depend 100.0 3.2E-51 7E-56 387.8 7.6 259 22-318 10-272 (355)
33 KOG0664 Nemo-like MAPK-related 100.0 8.4E-51 1.8E-55 389.9 10.5 288 27-319 57-349 (449)
34 cd07874 STKc_JNK3 Catalytic do 100.0 4.7E-48 1E-52 405.6 31.9 293 21-322 15-320 (355)
35 cd07855 STKc_ERK5 Catalytic do 100.0 2.8E-48 6E-53 404.0 28.6 330 20-353 2-332 (334)
36 cd07851 STKc_p38 Catalytic dom 100.0 9.4E-48 2E-52 401.7 31.0 332 19-361 11-343 (343)
37 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.9E-48 8.5E-53 397.0 26.0 291 19-320 1-295 (303)
38 KOG0605 NDR and related serine 100.0 1.4E-48 3.1E-53 405.5 22.8 266 21-321 139-453 (550)
39 cd07862 STKc_CDK6 Catalytic do 100.0 6.3E-48 1.4E-52 392.0 26.9 284 23-316 1-290 (290)
40 cd07834 STKc_MAPK Catalytic do 100.0 7.3E-48 1.6E-52 399.3 27.7 329 24-354 1-329 (330)
41 PTZ00036 glycogen synthase kin 100.0 2.8E-47 6.1E-52 411.5 31.0 286 22-321 65-359 (440)
42 cd07848 STKc_CDKL5 Catalytic d 100.0 2.1E-47 4.7E-52 387.5 26.8 285 23-316 1-287 (287)
43 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.5E-47 9.6E-52 390.3 28.5 291 19-320 2-293 (309)
44 cd07863 STKc_CDK4 Catalytic do 100.0 3.7E-47 8E-52 385.6 26.4 283 24-316 1-288 (288)
45 cd07850 STKc_JNK Catalytic dom 100.0 1.6E-46 3.5E-51 393.9 31.8 327 19-355 12-352 (353)
46 KOG0669 Cyclin T-dependent kin 100.0 3.2E-49 6.9E-54 375.5 9.3 303 15-318 9-320 (376)
47 PTZ00284 protein kinase; Provi 100.0 6.3E-47 1.4E-51 412.0 28.4 285 22-321 128-446 (467)
48 PHA03212 serine/threonine kina 100.0 9.8E-47 2.1E-51 401.3 27.6 282 23-321 92-384 (391)
49 KOG0578 p21-activated serine/t 100.0 9.8E-48 2.1E-52 402.0 19.5 254 23-317 273-527 (550)
50 cd07880 STKc_p38gamma_MAPK12 C 100.0 6E-46 1.3E-50 388.3 32.7 333 18-361 10-343 (343)
51 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.3E-46 1.6E-50 387.9 33.3 332 19-361 13-345 (345)
52 KOG0198 MEKK and related serin 100.0 3.2E-47 6.9E-52 386.3 21.2 264 21-319 15-282 (313)
53 KOG0585 Ca2+/calmodulin-depend 100.0 2.4E-47 5.3E-52 390.0 19.8 272 15-319 89-378 (576)
54 cd07879 STKc_p38delta_MAPK13 C 100.0 1E-45 2.2E-50 386.3 31.5 331 19-361 11-342 (342)
55 KOG0582 Ste20-like serine/thre 100.0 1.2E-46 2.6E-51 382.9 23.7 275 19-320 22-300 (516)
56 cd05612 STKc_PRKX_like Catalyt 100.0 1.8E-46 3.9E-51 382.9 25.1 253 23-319 1-260 (291)
57 cd07857 STKc_MPK1 Catalytic do 100.0 1.5E-45 3.2E-50 383.1 30.9 326 24-354 1-330 (332)
58 PTZ00263 protein kinase A cata 100.0 4.6E-46 9.9E-51 386.9 25.6 253 22-318 17-276 (329)
59 cd07868 STKc_CDK8 Catalytic do 100.0 8.8E-46 1.9E-50 381.5 27.2 281 28-316 6-317 (317)
60 cd07852 STKc_MAPK15 Catalytic 100.0 1E-45 2.2E-50 385.0 27.5 331 20-356 4-337 (337)
61 cd05571 STKc_PKB Catalytic dom 100.0 4.8E-46 1E-50 385.6 24.6 250 29-319 1-257 (323)
62 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-45 3.8E-50 386.6 27.9 263 19-320 31-300 (382)
63 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-45 3.9E-50 376.7 27.0 291 19-320 2-293 (301)
64 KOG0694 Serine/threonine prote 100.0 2.7E-46 5.8E-51 398.1 21.3 256 23-320 368-631 (694)
65 KOG0611 Predicted serine/threo 100.0 1E-46 2.2E-51 377.9 15.5 255 20-317 50-307 (668)
66 cd05599 STKc_NDR_like Catalyti 100.0 2E-45 4.4E-50 386.7 25.9 262 23-319 1-302 (364)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.4E-45 5.2E-50 381.7 25.9 261 23-319 1-263 (333)
68 cd05628 STKc_NDR1 Catalytic do 100.0 3.7E-45 7.9E-50 385.2 27.3 262 23-319 1-299 (363)
69 KOG0599 Phosphorylase kinase g 100.0 5.1E-47 1.1E-51 364.0 11.6 263 24-322 18-292 (411)
70 cd05626 STKc_LATS2 Catalytic d 100.0 4.2E-45 9.1E-50 387.4 27.3 263 23-319 1-311 (381)
71 cd05625 STKc_LATS1 Catalytic d 100.0 3.5E-45 7.6E-50 387.9 26.4 262 23-319 1-311 (382)
72 cd05631 STKc_GRK4 Catalytic do 100.0 4E-45 8.7E-50 371.6 25.3 258 25-320 2-268 (285)
73 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-45 6.8E-50 387.6 25.4 262 23-319 1-311 (377)
74 KOG0610 Putative serine/threon 100.0 1.4E-45 3E-50 372.5 21.4 264 23-322 77-401 (459)
75 cd07839 STKc_CDK5 Catalytic do 100.0 4.2E-45 9.1E-50 369.8 24.6 282 24-316 1-284 (284)
76 KOG0589 Serine/threonine prote 100.0 3.6E-46 7.9E-51 388.0 17.2 259 21-318 2-263 (426)
77 cd05573 STKc_ROCK_NDR_like Cat 100.0 3.8E-45 8.3E-50 382.0 24.8 262 23-319 1-291 (350)
78 PTZ00426 cAMP-dependent protei 100.0 4E-45 8.7E-50 381.9 24.7 254 22-319 29-290 (340)
79 cd05598 STKc_LATS Catalytic do 100.0 3.8E-45 8.2E-50 386.7 24.1 262 23-319 1-307 (376)
80 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.2E-44 7E-49 373.0 30.5 321 19-353 6-326 (328)
81 cd05585 STKc_YPK1_like Catalyt 100.0 5.4E-45 1.2E-49 375.8 24.3 248 31-319 1-253 (312)
82 cd07861 STKc_CDK1_euk Catalyti 100.0 2E-44 4.4E-49 364.7 27.7 282 24-316 1-285 (285)
83 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-44 3.6E-49 370.9 26.8 294 21-322 5-299 (309)
84 cd05593 STKc_PKB_gamma Catalyt 100.0 1E-44 2.3E-49 376.7 25.3 250 29-319 1-257 (328)
85 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-44 3.1E-49 374.8 25.2 250 29-319 1-257 (323)
86 cd05601 STKc_CRIK Catalytic do 100.0 1E-44 2.2E-49 376.4 23.5 262 23-319 1-269 (330)
87 KOG4717 Serine/threonine prote 100.0 1.4E-44 3E-49 371.2 23.7 259 21-321 16-278 (864)
88 cd07867 STKc_CDC2L6 Catalytic 100.0 3.1E-44 6.7E-49 369.5 26.4 281 28-316 6-317 (317)
89 KOG0604 MAP kinase-activated p 100.0 1.8E-45 3.9E-50 357.6 15.0 279 9-325 48-334 (400)
90 cd05596 STKc_ROCK Catalytic do 100.0 3.4E-44 7.4E-49 379.1 26.2 263 21-318 41-309 (370)
91 cd05614 STKc_MSK2_N N-terminal 100.0 3E-44 6.4E-49 373.2 25.4 260 24-318 1-272 (332)
92 cd05587 STKc_cPKC Catalytic do 100.0 3.7E-44 8.1E-49 371.5 25.9 255 24-319 1-263 (324)
93 cd06649 PKc_MEK2 Catalytic dom 100.0 9.2E-44 2E-48 369.8 28.6 279 22-319 4-307 (331)
94 cd05590 STKc_nPKC_eta Catalyti 100.0 2.5E-44 5.4E-49 372.5 24.3 250 29-319 1-259 (320)
95 KOG0671 LAMMER dual specificit 100.0 1.2E-45 2.6E-50 369.8 13.7 281 21-320 87-413 (415)
96 cd05589 STKc_PKN Catalytic dom 100.0 4.3E-44 9.3E-49 371.1 25.6 253 25-319 1-263 (324)
97 cd05594 STKc_PKB_alpha Catalyt 100.0 2.1E-44 4.5E-49 373.6 23.0 250 29-319 1-258 (325)
98 cd05627 STKc_NDR2 Catalytic do 100.0 3E-44 6.5E-49 377.8 24.2 262 23-319 1-299 (360)
99 cd07860 STKc_CDK2_3 Catalytic 100.0 1.2E-43 2.7E-48 359.1 27.7 282 24-316 1-284 (284)
100 cd07832 STKc_CCRK Catalytic do 100.0 1.1E-43 2.4E-48 359.1 26.9 285 24-317 1-286 (286)
101 cd05591 STKc_nPKC_epsilon Cata 100.0 4.7E-44 1E-48 370.3 24.5 250 29-319 1-260 (321)
102 cd05621 STKc_ROCK2 Catalytic d 100.0 6.3E-44 1.4E-48 377.1 25.8 262 22-318 42-309 (370)
103 cd05597 STKc_DMPK_like Catalyt 100.0 1.2E-43 2.7E-48 369.0 27.4 264 23-319 1-272 (331)
104 cd05584 STKc_p70S6K Catalytic 100.0 6.9E-44 1.5E-48 369.5 25.4 251 28-319 1-262 (323)
105 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.2E-43 4.8E-48 368.6 29.0 300 19-323 1-310 (342)
106 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-43 2.5E-48 367.7 25.9 255 24-319 1-263 (323)
107 cd05575 STKc_SGK Catalytic dom 100.0 6.3E-44 1.4E-48 369.7 23.9 250 29-319 1-257 (323)
108 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-43 4E-48 359.8 26.9 288 23-317 1-295 (295)
109 cd07841 STKc_CDK7 Catalytic do 100.0 1.9E-43 4.1E-48 360.5 26.7 286 24-321 1-290 (298)
110 cd05620 STKc_nPKC_delta Cataly 100.0 9.5E-44 2.1E-48 367.5 24.8 250 29-319 1-254 (316)
111 PF00069 Pkinase: Protein kina 100.0 6E-44 1.3E-48 355.4 22.2 258 25-316 1-260 (260)
112 cd07847 STKc_CDKL1_4 Catalytic 100.0 2E-43 4.3E-48 357.3 26.3 282 23-316 1-286 (286)
113 cd07865 STKc_CDK9 Catalytic do 100.0 3E-43 6.6E-48 360.1 27.7 296 19-316 8-310 (310)
114 PHA03207 serine/threonine kina 100.0 1E-43 2.3E-48 378.2 25.1 281 22-318 91-380 (392)
115 cd07844 STKc_PCTAIRE_like Cata 100.0 2.5E-43 5.3E-48 358.4 26.7 287 19-316 1-291 (291)
116 cd05592 STKc_nPKC_theta_delta 100.0 1.5E-43 3.3E-48 365.9 24.7 250 29-319 1-254 (316)
117 cd07866 STKc_BUR1 Catalytic do 100.0 2.3E-43 5.1E-48 361.1 25.8 296 19-316 4-311 (311)
118 cd05582 STKc_RSK_N N-terminal 100.0 5.3E-44 1.2E-48 369.3 21.1 251 28-319 1-260 (318)
119 cd05623 STKc_MRCK_alpha Cataly 100.0 2.6E-43 5.6E-48 366.6 26.2 264 23-319 1-272 (332)
120 cd05622 STKc_ROCK1 Catalytic d 100.0 2.9E-43 6.4E-48 372.1 26.5 263 21-318 41-309 (371)
121 KOG0580 Serine/threonine prote 100.0 1.4E-44 3E-49 342.3 14.6 257 20-319 19-279 (281)
122 KOG0201 Serine/threonine prote 100.0 2.5E-45 5.3E-50 373.2 9.6 256 22-318 12-268 (467)
123 PTZ00283 serine/threonine prot 100.0 4.6E-43 1E-47 383.7 28.2 268 20-320 29-304 (496)
124 cd05570 STKc_PKC Catalytic dom 100.0 2.3E-43 4.9E-48 364.8 24.4 250 29-319 1-258 (318)
125 PHA03211 serine/threonine kina 100.0 2.7E-43 5.9E-48 381.1 25.9 282 21-318 167-460 (461)
126 cd05588 STKc_aPKC Catalytic do 100.0 3.1E-43 6.8E-48 365.6 25.4 259 29-319 1-268 (329)
127 PLN00009 cyclin-dependent kina 100.0 5E-43 1.1E-47 356.9 26.2 288 23-321 2-292 (294)
128 cd07835 STKc_CDK1_like Catalyt 100.0 7.3E-43 1.6E-47 353.3 27.1 281 25-316 1-283 (283)
129 PHA03209 serine/threonine kina 100.0 3.8E-43 8.3E-48 369.3 25.7 279 22-319 65-357 (357)
130 cd05605 STKc_GRK4_like Catalyt 100.0 5.1E-43 1.1E-47 356.1 25.7 258 24-319 1-267 (285)
131 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.6E-43 1.2E-47 354.3 25.7 282 23-316 1-286 (286)
132 cd07836 STKc_Pho85 Catalytic d 100.0 4.5E-43 9.8E-48 354.6 25.0 281 24-316 1-284 (284)
133 cd05615 STKc_cPKC_alpha Cataly 100.0 6.2E-43 1.3E-47 362.5 26.6 255 24-319 1-263 (323)
134 cd05608 STKc_GRK1 Catalytic do 100.0 3.6E-43 7.8E-48 356.4 23.9 253 31-320 1-264 (280)
135 cd07843 STKc_CDC2L1 Catalytic 100.0 4.2E-43 9.1E-48 357.3 24.5 286 23-316 5-293 (293)
136 cd05604 STKc_SGK3 Catalytic do 100.0 2.5E-43 5.5E-48 365.4 22.9 250 29-319 1-257 (325)
137 cd05618 STKc_aPKC_iota Catalyt 100.0 5.1E-43 1.1E-47 364.2 25.2 258 29-319 1-268 (329)
138 cd05619 STKc_nPKC_theta Cataly 100.0 4.6E-43 1E-47 362.5 24.7 251 29-320 1-255 (316)
139 cd07831 STKc_MOK Catalytic dom 100.0 8.7E-43 1.9E-47 351.9 26.0 280 25-316 1-282 (282)
140 PLN00034 mitogen-activated pro 100.0 3.7E-43 8E-48 368.5 23.7 258 22-319 73-334 (353)
141 cd05624 STKc_MRCK_beta Catalyt 100.0 7.6E-43 1.6E-47 363.1 25.8 263 23-318 1-271 (331)
142 cd05603 STKc_SGK2 Catalytic do 100.0 4.5E-43 9.9E-48 362.8 23.6 250 29-319 1-257 (321)
143 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-42 4.1E-47 345.9 27.1 258 23-316 2-263 (263)
144 cd05602 STKc_SGK1 Catalytic do 100.0 5.8E-43 1.3E-47 362.8 24.0 249 29-318 1-256 (325)
145 KOG0192 Tyrosine kinase specif 100.0 6.4E-43 1.4E-47 364.4 24.0 253 22-312 40-298 (362)
146 cd06650 PKc_MEK1 Catalytic dom 100.0 1.1E-42 2.4E-47 362.3 25.7 283 22-319 4-305 (333)
147 cd05586 STKc_Sck1_like Catalyt 100.0 3.2E-43 7E-48 365.3 20.1 249 31-318 1-258 (330)
148 cd07833 STKc_CDKL Catalytic do 100.0 1.3E-42 2.9E-47 351.6 24.0 286 23-316 1-288 (288)
149 cd07842 STKc_CDK8_like Catalyt 100.0 3.2E-42 7E-47 353.8 26.8 288 24-316 1-316 (316)
150 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7E-42 1.5E-46 348.0 28.4 286 19-316 1-291 (291)
151 cd05118 STKc_CMGC Catalytic do 100.0 2.8E-42 6.1E-47 348.0 25.2 282 25-316 1-283 (283)
152 PTZ00024 cyclin-dependent prot 100.0 3.3E-42 7.1E-47 358.1 25.0 295 19-322 4-322 (335)
153 cd07829 STKc_CDK_like Catalyti 100.0 4.1E-42 8.9E-47 346.7 24.9 281 25-316 1-282 (282)
154 cd05617 STKc_aPKC_zeta Catalyt 100.0 3E-42 6.5E-47 358.0 24.5 257 29-319 1-266 (327)
155 cd08223 STKc_Nek4 Catalytic do 100.0 1.5E-41 3.3E-46 338.2 28.1 254 24-316 1-257 (257)
156 PTZ00266 NIMA-related protein 100.0 5.5E-42 1.2E-46 389.6 28.1 264 19-319 9-301 (1021)
157 cd05630 STKc_GRK6 Catalytic do 100.0 5.2E-42 1.1E-46 349.0 25.1 258 24-319 1-267 (285)
158 cd07864 STKc_CDK12 Catalytic d 100.0 5.1E-42 1.1E-46 350.3 24.7 289 22-316 6-302 (302)
159 PTZ00267 NIMA-related protein 100.0 6.9E-42 1.5E-46 373.4 27.0 257 23-319 67-329 (478)
160 cd07838 STKc_CDK4_6_like Catal 100.0 1.2E-41 2.6E-46 344.1 26.4 282 25-316 1-287 (287)
161 cd06615 PKc_MEK Catalytic doma 100.0 1.3E-41 2.8E-46 349.9 27.0 283 23-320 1-294 (308)
162 cd07840 STKc_CDK9_like Catalyt 100.0 6.4E-42 1.4E-46 345.8 24.3 283 25-316 1-287 (287)
163 KOG0668 Casein kinase II, alph 100.0 1.8E-43 4E-48 332.2 11.7 290 16-321 31-330 (338)
164 cd05607 STKc_GRK7 Catalytic do 100.0 7E-42 1.5E-46 346.4 24.2 252 31-319 1-260 (277)
165 cd05632 STKc_GRK5 Catalytic do 100.0 1.5E-41 3.3E-46 345.3 26.7 259 24-320 1-268 (285)
166 KOG0577 Serine/threonine prote 100.0 2.2E-42 4.9E-47 359.8 20.8 258 20-318 23-283 (948)
167 cd06651 STKc_MEKK3 Catalytic d 100.0 1.7E-41 3.8E-46 340.6 25.9 260 23-317 2-265 (266)
168 cd08227 PK_STRAD_alpha Pseudok 100.0 5.4E-42 1.2E-46 355.7 22.4 287 27-320 2-314 (327)
169 cd05102 PTKc_VEGFR3 Catalytic 100.0 1E-41 2.2E-46 354.8 24.4 254 22-312 6-329 (338)
170 cd08529 STKc_FA2-like Catalyti 100.0 4.4E-41 9.6E-46 334.3 27.7 253 24-316 1-256 (256)
171 cd05580 STKc_PKA Catalytic dom 100.0 3.5E-41 7.6E-46 343.1 27.3 254 23-320 1-261 (290)
172 KOG0596 Dual specificity; seri 100.0 1.2E-42 2.5E-47 361.0 16.2 268 14-318 354-632 (677)
173 KOG0690 Serine/threonine prote 100.0 4.7E-43 1E-47 343.5 12.3 257 23-320 168-431 (516)
174 cd06645 STKc_MAP4K3 Catalytic 100.0 1E-41 2.2E-46 342.0 22.3 260 20-315 6-267 (267)
175 KOG0574 STE20-like serine/thre 100.0 1.9E-44 4.1E-49 350.0 2.2 254 23-318 33-288 (502)
176 KOG0607 MAP kinase-interacting 100.0 2.2E-42 4.7E-47 338.3 15.8 275 29-322 84-370 (463)
177 cd05574 STKc_phototropin_like 100.0 7.5E-41 1.6E-45 344.7 28.0 262 23-320 1-296 (316)
178 cd06644 STKc_STK10_LOK Catalyt 100.0 6.5E-41 1.4E-45 341.3 27.1 263 20-320 9-276 (292)
179 cd07830 STKc_MAK_like Catalyti 100.0 5.1E-41 1.1E-45 339.4 26.1 280 25-316 1-283 (283)
180 cd06654 STKc_PAK1 Catalytic do 100.0 7.7E-41 1.7E-45 342.2 27.1 261 17-318 14-275 (296)
181 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.7E-41 1E-45 340.8 25.2 261 23-321 1-270 (286)
182 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.8E-41 1.9E-45 333.9 26.7 262 23-316 1-267 (267)
183 cd06652 STKc_MEKK2 Catalytic d 100.0 1.5E-40 3.2E-45 333.4 28.1 260 23-317 2-265 (265)
184 cd06646 STKc_MAP4K5 Catalytic 100.0 3.9E-41 8.4E-46 337.7 23.8 259 21-315 7-267 (267)
185 cd06639 STKc_myosinIIIB Cataly 100.0 1.5E-40 3.3E-45 338.1 28.2 262 22-317 21-291 (291)
186 cd06628 STKc_MAPKKK_Byr2_like 100.0 7.5E-41 1.6E-45 335.4 25.6 256 24-316 1-267 (267)
187 cd06637 STKc_TNIK Catalytic do 100.0 4E-41 8.7E-46 338.2 23.6 260 22-316 5-272 (272)
188 KOG0586 Serine/threonine prote 100.0 4.8E-41 1E-45 354.6 25.0 261 21-322 54-315 (596)
189 cd08221 STKc_Nek9 Catalytic do 100.0 1.5E-40 3.3E-45 331.1 27.3 253 24-316 1-256 (256)
190 cd06655 STKc_PAK2 Catalytic do 100.0 1.4E-40 3E-45 340.4 27.7 262 18-320 13-276 (296)
191 cd06630 STKc_MEKK1 Catalytic d 100.0 8.1E-41 1.8E-45 335.0 25.3 261 24-317 1-268 (268)
192 cd06631 STKc_YSK4 Catalytic do 100.0 1.2E-40 2.7E-45 333.7 26.4 257 24-316 1-265 (265)
193 PHA03210 serine/threonine kina 100.0 2.3E-41 4.9E-46 371.1 22.7 286 22-318 147-459 (501)
194 cd06613 STKc_MAP4K3_like Catal 100.0 1.4E-40 3.1E-45 331.8 26.4 257 23-315 3-262 (262)
195 cd08217 STKc_Nek2 Catalytic do 100.0 1.7E-40 3.6E-45 330.8 26.7 255 24-316 1-265 (265)
196 cd08218 STKc_Nek1 Catalytic do 100.0 1.4E-40 3.1E-45 331.3 26.0 253 24-316 1-256 (256)
197 cd06638 STKc_myosinIIIA Cataly 100.0 1.7E-40 3.7E-45 336.4 27.0 267 16-316 10-286 (286)
198 cd08220 STKc_Nek8 Catalytic do 100.0 2.1E-40 4.6E-45 329.4 27.0 252 24-316 1-256 (256)
199 KOG0584 Serine/threonine prote 100.0 4.7E-42 1E-46 362.6 15.7 264 16-319 32-302 (632)
200 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.6E-40 3.5E-45 335.8 26.3 258 23-319 1-267 (283)
201 cd05609 STKc_MAST Catalytic do 100.0 2.1E-40 4.6E-45 340.0 27.5 262 23-319 1-279 (305)
202 cd06611 STKc_SLK_like Catalyti 100.0 6.4E-41 1.4E-45 338.8 23.4 259 23-319 5-268 (280)
203 cd05578 STKc_Yank1 Catalytic d 100.0 8.3E-41 1.8E-45 333.6 23.7 254 24-316 1-258 (258)
204 cd06626 STKc_MEKK4 Catalytic d 100.0 3.4E-40 7.4E-45 329.4 28.2 261 24-316 1-264 (264)
205 cd06608 STKc_myosinIII_like Ca 100.0 1.7E-40 3.6E-45 333.0 26.0 261 22-316 5-275 (275)
206 cd06609 STKc_MST3_like Catalyt 100.0 8.1E-41 1.7E-45 337.0 23.4 256 23-319 1-257 (274)
207 cd06643 STKc_SLK Catalytic dom 100.0 1.6E-40 3.4E-45 336.5 25.5 256 25-318 7-267 (282)
208 cd06656 STKc_PAK3 Catalytic do 100.0 1.3E-40 2.7E-45 340.8 24.4 260 20-320 16-276 (297)
209 KOG0612 Rho-associated, coiled 100.0 3.1E-42 6.7E-47 381.4 13.3 265 22-321 74-346 (1317)
210 cd06619 PKc_MKK5 Catalytic dom 100.0 1.4E-40 3E-45 336.9 24.3 258 23-319 1-259 (279)
211 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2.4E-40 5.2E-45 334.9 25.4 261 21-316 14-282 (282)
212 cd06612 STKc_MST1_2 Catalytic 100.0 2.4E-40 5.2E-45 329.0 24.2 252 23-316 3-256 (256)
213 KOG4279 Serine/threonine prote 100.0 7.2E-41 1.6E-45 353.3 21.1 266 13-319 568-838 (1226)
214 cd06629 STKc_MAPKKK_Bck1_like 100.0 5.2E-40 1.1E-44 330.4 26.6 262 24-316 2-272 (272)
215 cd06658 STKc_PAK5 Catalytic do 100.0 1.3E-40 2.8E-45 340.0 22.2 258 23-321 22-280 (292)
216 PHA02988 hypothetical protein; 100.0 4.1E-40 9E-45 335.0 25.6 246 29-312 26-274 (283)
217 cd06632 STKc_MEKK1_plant Catal 100.0 6E-40 1.3E-44 326.2 26.0 254 24-316 1-258 (258)
218 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-40 3.1E-45 332.7 21.6 257 23-319 1-263 (265)
219 KOG4236 Serine/threonine prote 100.0 7.3E-42 1.6E-46 351.9 12.5 254 25-319 564-825 (888)
220 cd06623 PKc_MAPKK_plant_like C 100.0 8.4E-40 1.8E-44 326.3 26.1 259 23-319 1-262 (264)
221 KOG2345 Serine/threonine prote 100.0 7.5E-41 1.6E-45 318.3 17.5 268 17-313 15-296 (302)
222 cd06616 PKc_MKK4 Catalytic dom 100.0 3E-40 6.5E-45 335.2 23.0 261 24-319 5-273 (288)
223 cd05096 PTKc_DDR1 Catalytic do 100.0 8.4E-40 1.8E-44 335.2 26.4 259 22-312 4-300 (304)
224 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.5E-40 1.6E-44 329.2 25.4 251 22-312 4-260 (266)
225 cd08225 STKc_Nek5 Catalytic do 100.0 9.3E-40 2E-44 325.0 25.6 253 24-316 1-257 (257)
226 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-39 4.3E-44 325.3 28.2 259 23-316 2-264 (264)
227 cd06648 STKc_PAK_II Catalytic 100.0 1.6E-39 3.6E-44 330.4 27.1 258 23-321 19-277 (285)
228 KOG1989 ARK protein kinase fam 100.0 1.1E-40 2.3E-45 365.2 19.4 257 22-313 36-307 (738)
229 cd06659 STKc_PAK6 Catalytic do 100.0 5.1E-40 1.1E-44 336.4 22.8 257 23-320 21-278 (297)
230 cd05577 STKc_GRK Catalytic dom 100.0 7.3E-40 1.6E-44 331.0 23.6 252 31-320 1-261 (277)
231 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-39 2.9E-44 324.4 25.1 248 24-312 1-251 (255)
232 cd05572 STKc_cGK_PKG Catalytic 100.0 9.4E-40 2E-44 326.8 24.1 249 31-319 1-258 (262)
233 KOG0579 Ste20-like serine/thre 100.0 1.8E-41 3.8E-46 354.7 11.9 262 20-319 29-295 (1187)
234 KOG0986 G protein-coupled rece 100.0 3.5E-41 7.5E-46 342.9 13.7 261 22-320 184-453 (591)
235 cd05581 STKc_PDK1 Catalytic do 100.0 1.2E-39 2.6E-44 328.1 24.8 256 23-316 1-280 (280)
236 cd05048 PTKc_Ror Catalytic Dom 100.0 8.8E-40 1.9E-44 330.7 23.9 252 23-313 5-279 (283)
237 cd08215 STKc_Nek Catalytic dom 100.0 3.1E-39 6.8E-44 320.0 27.2 253 24-316 1-258 (258)
238 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 3.2E-39 6.9E-44 328.2 27.5 266 23-320 1-273 (287)
239 KOG0670 U4/U6-associated splic 100.0 6.2E-41 1.4E-45 345.1 14.7 280 22-318 431-751 (752)
240 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-39 2.8E-44 330.3 24.2 252 30-320 1-262 (279)
241 KOG0983 Mitogen-activated prot 100.0 1.2E-40 2.5E-45 320.4 14.8 259 25-320 94-356 (391)
242 cd06647 STKc_PAK_I Catalytic d 100.0 1.5E-39 3.3E-44 332.1 24.1 258 22-320 18-276 (293)
243 cd05052 PTKc_Abl Catalytic dom 100.0 3.7E-39 8E-44 323.2 26.3 248 23-312 6-257 (263)
244 cd06607 STKc_TAO Catalytic dom 100.0 2.9E-39 6.3E-44 331.9 26.1 258 20-318 12-272 (307)
245 KOG1290 Serine/threonine prote 100.0 1.4E-39 3E-44 334.0 23.1 288 21-322 76-559 (590)
246 cd06627 STKc_Cdc7_like Catalyt 100.0 6.3E-39 1.4E-43 317.8 27.3 253 24-316 1-254 (254)
247 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.6E-39 3.5E-44 329.7 23.5 266 23-319 5-272 (284)
248 cd06624 STKc_ASK Catalytic dom 100.0 5.4E-39 1.2E-43 322.6 26.9 251 28-316 13-268 (268)
249 cd05611 STKc_Rim15_like Cataly 100.0 2.2E-39 4.9E-44 323.7 24.0 250 29-319 2-257 (260)
250 cd06917 STKc_NAK1_like Catalyt 100.0 2.7E-39 5.8E-44 326.2 24.4 257 24-320 2-262 (277)
251 cd05035 PTKc_Axl_like Catalyti 100.0 4.5E-39 9.8E-44 322.9 25.8 256 25-313 1-268 (273)
252 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-39 7.3E-44 326.9 25.1 251 30-319 1-261 (278)
253 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-39 3.2E-44 344.2 23.3 252 23-312 38-367 (374)
254 cd06606 STKc_MAPKKK Catalytic 100.0 9.7E-39 2.1E-43 316.1 27.5 259 24-316 1-260 (260)
255 KOG1035 eIF-2alpha kinase GCN2 100.0 2.4E-40 5.2E-45 369.1 17.5 264 23-317 479-875 (1351)
256 cd06640 STKc_MST4 Catalytic do 100.0 1.8E-39 3.9E-44 328.1 22.4 255 23-319 4-259 (277)
257 cd05104 PTKc_Kit Catalytic dom 100.0 2.6E-39 5.7E-44 342.4 24.4 253 23-313 35-370 (375)
258 cd08226 PK_STRAD_beta Pseudoki 100.0 1.1E-39 2.4E-44 338.5 21.1 289 28-321 3-316 (328)
259 cd08530 STKc_CNK2-like Catalyt 100.0 6.3E-39 1.4E-43 318.5 25.5 251 24-316 1-256 (256)
260 cd05116 PTKc_Syk Catalytic dom 100.0 5E-39 1.1E-43 321.1 24.9 245 30-312 2-250 (257)
261 cd05613 STKc_MSK1_N N-terminal 100.0 5E-39 1.1E-43 326.9 25.3 263 24-320 1-275 (290)
262 cd05108 PTKc_EGFR Catalytic do 100.0 5.2E-39 1.1E-43 331.5 25.5 252 22-313 6-264 (316)
263 cd05062 PTKc_IGF-1R Catalytic 100.0 6.9E-39 1.5E-43 323.6 25.7 254 21-313 4-274 (277)
264 cd05054 PTKc_VEGFR Catalytic d 100.0 2.3E-39 5E-44 338.0 22.8 254 23-313 7-329 (337)
265 cd05075 PTKc_Axl Catalytic dom 100.0 6E-39 1.3E-43 322.4 24.9 256 25-313 1-267 (272)
266 cd05049 PTKc_Trk Catalytic dom 100.0 3.7E-39 8E-44 325.4 23.4 252 22-312 4-276 (280)
267 KOG0197 Tyrosine kinases [Sign 100.0 4.2E-40 9.2E-45 343.8 17.0 246 23-311 206-455 (468)
268 cd08216 PK_STRAD Pseudokinase 100.0 1.6E-39 3.6E-44 334.2 21.1 275 35-320 12-302 (314)
269 cd05610 STKc_MASTL Catalytic d 100.0 6E-39 1.3E-43 362.9 27.6 147 23-174 4-152 (669)
270 cd05061 PTKc_InsR Catalytic do 100.0 1.1E-38 2.4E-43 324.5 26.9 259 22-319 5-286 (288)
271 cd05579 STKc_MAST_like Catalyt 100.0 5E-39 1.1E-43 320.2 23.7 253 31-319 1-263 (265)
272 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.2E-39 2.6E-44 329.2 19.1 255 23-319 4-259 (277)
273 cd06633 STKc_TAO3 Catalytic do 100.0 1E-38 2.2E-43 329.3 26.1 263 15-318 13-278 (313)
274 cd05122 PKc_STE Catalytic doma 100.0 2.1E-38 4.6E-43 312.4 27.0 251 24-315 1-253 (253)
275 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.2E-38 2.6E-43 317.9 25.4 248 22-312 3-253 (256)
276 cd05036 PTKc_ALK_LTK Catalytic 100.0 9.8E-39 2.1E-43 322.8 24.7 253 22-313 5-274 (277)
277 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-38 2.7E-43 318.4 25.2 248 22-312 5-256 (261)
278 cd05089 PTKc_Tie1 Catalytic do 100.0 1.2E-38 2.5E-43 325.9 25.3 249 23-313 2-271 (297)
279 PHA03390 pk1 serine/threonine- 100.0 7.3E-39 1.6E-43 322.7 23.3 246 23-317 14-266 (267)
280 cd08228 STKc_Nek6 Catalytic do 100.0 1.1E-38 2.4E-43 319.6 24.5 253 23-312 2-260 (267)
281 cd06641 STKc_MST3 Catalytic do 100.0 1.2E-38 2.5E-43 322.2 24.8 254 24-319 5-259 (277)
282 cd05088 PTKc_Tie2 Catalytic do 100.0 8.7E-39 1.9E-43 328.1 24.1 249 23-313 7-276 (303)
283 cd05084 PTKc_Fes Catalytic dom 100.0 1.2E-38 2.6E-43 316.9 24.2 245 29-312 1-248 (252)
284 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-38 2.5E-43 323.6 24.5 260 19-319 15-276 (286)
285 cd05033 PTKc_EphR Catalytic do 100.0 2.2E-38 4.9E-43 317.8 26.2 253 22-313 3-261 (266)
286 cd05093 PTKc_TrkB Catalytic do 100.0 1.6E-38 3.5E-43 323.2 25.5 251 22-312 4-274 (288)
287 cd06635 STKc_TAO1 Catalytic do 100.0 1.7E-38 3.7E-43 328.0 26.0 258 20-318 22-282 (317)
288 cd00192 PTKc Catalytic domain 100.0 1.6E-38 3.4E-43 315.7 24.8 246 29-313 1-260 (262)
289 cd05068 PTKc_Frk_like Catalyti 100.0 2.5E-38 5.4E-43 316.6 26.4 248 22-312 5-256 (261)
290 cd06657 STKc_PAK4 Catalytic do 100.0 1E-38 2.2E-43 326.1 23.8 256 24-320 21-277 (292)
291 cd05090 PTKc_Ror1 Catalytic do 100.0 2E-38 4.3E-43 321.3 25.6 252 23-313 5-279 (283)
292 cd05071 PTKc_Src Catalytic dom 100.0 2.1E-38 4.5E-43 318.0 25.3 248 21-312 4-255 (262)
293 cd06634 STKc_TAO2 Catalytic do 100.0 2.6E-38 5.6E-43 325.4 26.6 258 21-319 13-273 (308)
294 cd05066 PTKc_EphR_A Catalytic 100.0 2.2E-38 4.9E-43 318.2 25.3 253 22-312 3-261 (267)
295 cd05060 PTKc_Syk_like Catalyti 100.0 2.3E-38 4.9E-43 316.1 25.2 245 29-312 1-250 (257)
296 cd05059 PTKc_Tec_like Catalyti 100.0 1.3E-38 2.8E-43 318.0 23.1 249 22-313 3-254 (256)
297 cd05063 PTKc_EphR_A2 Catalytic 100.0 3.2E-38 6.8E-43 316.8 26.0 253 22-312 4-262 (268)
298 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.8E-39 1.9E-43 319.3 21.7 247 23-312 6-256 (261)
299 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.3E-38 4.9E-43 316.7 24.1 247 22-312 5-255 (260)
300 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 4.2E-38 9.2E-43 314.8 26.1 253 23-312 2-260 (267)
301 cd05051 PTKc_DDR Catalytic dom 100.0 2.7E-38 5.8E-43 321.9 25.1 259 22-312 4-292 (296)
302 cd05053 PTKc_FGFR Catalytic do 100.0 2.4E-38 5.2E-43 322.1 24.5 253 22-313 11-287 (293)
303 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.4E-38 7.4E-43 315.3 25.1 249 22-313 3-254 (256)
304 cd05109 PTKc_HER2 Catalytic do 100.0 4.9E-38 1.1E-42 317.8 26.3 252 21-312 5-263 (279)
305 cd05032 PTKc_InsR_like Catalyt 100.0 4.9E-38 1.1E-42 316.7 26.2 252 22-312 5-273 (277)
306 cd06618 PKc_MKK7 Catalytic dom 100.0 4.7E-38 1E-42 321.1 26.0 262 21-320 13-280 (296)
307 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 5.1E-38 1.1E-42 318.2 25.9 270 22-312 3-278 (284)
308 PRK13184 pknD serine/threonine 100.0 3.1E-38 6.7E-43 357.8 26.9 256 23-313 2-285 (932)
309 cd05034 PTKc_Src_like Catalyti 100.0 4.9E-38 1.1E-42 313.9 25.2 248 22-312 5-256 (261)
310 cd08229 STKc_Nek7 Catalytic do 100.0 2E-38 4.4E-43 317.7 22.4 253 23-312 2-260 (267)
311 cd05091 PTKc_Ror2 Catalytic do 100.0 1.7E-38 3.7E-43 321.6 21.7 251 23-312 5-278 (283)
312 cd08222 STKc_Nek11 Catalytic d 100.0 4E-38 8.6E-43 314.6 24.0 252 24-316 1-260 (260)
313 cd05067 PTKc_Lck_Blk Catalytic 100.0 6E-38 1.3E-42 313.6 25.3 247 22-312 5-255 (260)
314 cd05065 PTKc_EphR_B Catalytic 100.0 7.9E-38 1.7E-42 314.3 26.1 253 22-312 3-263 (269)
315 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.1E-38 8.9E-43 335.9 24.9 253 22-312 36-392 (400)
316 cd05094 PTKc_TrkC Catalytic do 100.0 8.2E-38 1.8E-42 318.5 26.0 250 23-312 5-277 (291)
317 cd05097 PTKc_DDR_like Catalyti 100.0 7.2E-38 1.6E-42 319.5 25.2 258 23-312 5-291 (295)
318 cd05082 PTKc_Csk Catalytic dom 100.0 9E-38 2E-42 311.6 25.2 243 22-312 5-251 (256)
319 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.5E-38 1.4E-42 317.5 24.5 267 23-312 3-276 (283)
320 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-37 2.5E-42 311.8 25.8 247 22-312 5-255 (260)
321 KOG0603 Ribosomal protein S6 k 100.0 3.9E-39 8.4E-44 341.8 15.8 243 22-316 321-566 (612)
322 cd05583 STKc_MSK_N N-terminal 100.0 6.3E-38 1.4E-42 318.4 24.1 263 24-320 1-273 (288)
323 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-37 2.5E-42 310.6 25.4 244 21-312 4-251 (256)
324 cd05092 PTKc_TrkA Catalytic do 100.0 7.5E-38 1.6E-42 317.0 24.3 251 22-312 4-276 (280)
325 PHA02882 putative serine/threo 100.0 1.4E-37 3E-42 317.9 26.5 266 21-312 10-291 (294)
326 cd05098 PTKc_FGFR1 Catalytic d 100.0 8E-38 1.7E-42 321.2 24.7 252 23-313 18-295 (307)
327 KOG0696 Serine/threonine prote 100.0 3.7E-39 8E-44 324.1 14.3 258 22-320 348-613 (683)
328 cd05123 STKc_AGC Catalytic dom 100.0 9.4E-38 2E-42 309.3 24.3 245 31-316 1-250 (250)
329 cd05040 PTKc_Ack_like Catalyti 100.0 1.3E-37 2.9E-42 310.0 25.1 246 29-312 1-253 (257)
330 cd05111 PTK_HER3 Pseudokinase 100.0 1.5E-37 3.2E-42 314.9 25.6 250 23-312 7-263 (279)
331 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.2E-38 1.8E-42 317.2 23.7 271 22-313 3-279 (284)
332 KOG0193 Serine/threonine prote 100.0 6E-39 1.3E-43 337.0 15.7 259 17-312 385-648 (678)
333 cd05115 PTKc_Zap-70 Catalytic 100.0 1.6E-37 3.6E-42 310.8 25.3 243 31-312 3-250 (257)
334 cd05055 PTKc_PDGFR Catalytic d 100.0 2.1E-37 4.6E-42 317.8 26.4 253 22-312 34-296 (302)
335 KOG4645 MAPKKK (MAP kinase kin 100.0 5E-40 1.1E-44 368.0 7.3 262 23-318 1235-1499(1509)
336 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.2E-37 4.7E-42 319.2 26.4 251 23-312 12-288 (314)
337 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.8E-37 3.9E-42 318.0 25.6 253 22-313 14-292 (304)
338 cd05043 PTK_Ryk Pseudokinase d 100.0 2.3E-37 5E-42 312.8 25.6 254 21-312 4-271 (280)
339 PF07714 Pkinase_Tyr: Protein 100.0 7E-38 1.5E-42 314.1 21.6 248 26-312 2-257 (259)
340 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.4E-37 3E-42 325.1 24.5 255 22-313 6-335 (343)
341 cd05045 PTKc_RET Catalytic dom 100.0 1.9E-37 4.1E-42 315.5 24.5 250 24-312 1-281 (290)
342 cd05056 PTKc_FAK Catalytic dom 100.0 3.9E-37 8.4E-42 309.5 26.2 250 22-312 5-260 (270)
343 cd05073 PTKc_Hck Catalytic dom 100.0 5.5E-37 1.2E-41 306.9 26.6 247 22-312 5-255 (260)
344 cd05100 PTKc_FGFR3 Catalytic d 100.0 3E-37 6.6E-42 321.0 25.5 252 23-313 12-289 (334)
345 smart00219 TyrKc Tyrosine kina 100.0 3.7E-37 8E-42 305.8 24.9 248 25-312 1-256 (258)
346 cd05112 PTKc_Itk Catalytic dom 100.0 4.2E-37 9E-42 306.3 25.4 249 22-313 3-254 (256)
347 cd05047 PTKc_Tie Catalytic dom 100.0 2.7E-37 5.9E-42 311.0 23.9 242 29-312 1-263 (270)
348 PLN03225 Serine/threonine-prot 100.0 4.5E-37 9.8E-42 340.3 27.7 279 21-321 130-458 (566)
349 cd05057 PTKc_EGFR_like Catalyt 100.0 5.7E-37 1.2E-41 310.0 26.1 251 22-312 6-263 (279)
350 cd05095 PTKc_DDR2 Catalytic do 100.0 4.8E-37 1E-41 313.6 25.6 259 22-312 4-292 (296)
351 cd05050 PTKc_Musk Catalytic do 100.0 4.7E-37 1E-41 312.0 25.1 252 22-312 4-284 (288)
352 cd05041 PTKc_Fes_like Catalyti 100.0 4.4E-37 9.6E-42 305.2 24.2 244 29-312 1-247 (251)
353 cd05074 PTKc_Tyro3 Catalytic d 100.0 4E-37 8.6E-42 309.4 24.0 255 25-312 1-267 (273)
354 cd05085 PTKc_Fer Catalytic dom 100.0 7.7E-37 1.7E-41 303.3 25.6 243 29-312 1-246 (250)
355 KOG4721 Serine/threonine prote 100.0 1.8E-38 3.8E-43 329.6 13.5 238 27-315 128-366 (904)
356 cd05046 PTK_CCK4 Pseudokinase 100.0 8.3E-37 1.8E-41 307.7 25.0 252 23-313 5-272 (275)
357 KOG0614 cGMP-dependent protein 100.0 5.2E-39 1.1E-43 330.2 8.8 259 22-320 419-684 (732)
358 cd05083 PTKc_Chk Catalytic dom 100.0 8E-37 1.7E-41 304.4 24.2 240 23-312 6-249 (254)
359 cd05110 PTKc_HER4 Catalytic do 100.0 7.1E-37 1.5E-41 313.8 24.5 251 22-312 6-263 (303)
360 cd05042 PTKc_Aatyk Catalytic d 100.0 1E-36 2.2E-41 306.3 25.0 250 30-312 2-265 (269)
361 cd05576 STKc_RPK118_like Catal 100.0 3E-37 6.4E-42 305.4 20.8 228 34-316 4-237 (237)
362 KOG0608 Warts/lats-like serine 100.0 5.9E-38 1.3E-42 328.8 16.2 264 22-320 628-935 (1034)
363 KOG1006 Mitogen-activated prot 100.0 4.5E-39 9.7E-44 308.5 7.1 261 25-320 66-334 (361)
364 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.8E-37 1.7E-41 326.0 24.6 253 23-313 37-395 (401)
365 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-36 2.7E-41 303.9 24.3 247 29-312 1-254 (262)
366 KOG0587 Traf2- and Nck-interac 100.0 2.9E-37 6.2E-42 335.4 21.1 263 22-318 18-287 (953)
367 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.5E-36 5.5E-41 303.6 25.9 251 29-312 1-265 (269)
368 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.1E-36 2.5E-41 305.7 23.1 238 29-313 1-260 (262)
369 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.2E-37 9.2E-42 307.6 19.6 238 29-313 1-256 (258)
370 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-36 2.9E-41 306.7 23.4 270 22-312 3-278 (284)
371 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.6E-36 3.4E-41 302.1 21.9 236 29-312 1-256 (259)
372 cd08528 STKc_Nek10 Catalytic d 100.0 2.9E-36 6.2E-41 302.7 23.3 249 25-313 2-266 (269)
373 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.1E-36 4.5E-41 306.0 22.2 237 30-313 2-272 (274)
374 cd05044 PTKc_c-ros Catalytic d 100.0 2.1E-36 4.6E-41 303.4 22.0 245 29-312 1-265 (269)
375 cd05086 PTKc_Aatyk2 Catalytic 100.0 1.3E-35 2.7E-40 298.8 26.3 250 30-312 2-264 (268)
376 KOG1187 Serine/threonine prote 100.0 3.5E-36 7.7E-41 315.3 21.7 262 22-312 74-347 (361)
377 KOG1151 Tousled-like protein k 100.0 1.9E-37 4E-42 314.0 10.6 269 20-317 460-745 (775)
378 KOG0695 Serine/threonine prote 100.0 1.7E-36 3.7E-41 298.2 13.6 263 23-320 250-523 (593)
379 KOG0194 Protein tyrosine kinas 100.0 1.4E-35 3.1E-40 314.1 18.6 251 23-312 157-415 (474)
380 KOG1167 Serine/threonine prote 100.0 3E-36 6.5E-41 306.0 12.5 286 21-319 34-387 (418)
381 KOG1026 Nerve growth factor re 100.0 9.2E-36 2E-40 325.2 16.9 249 23-310 486-755 (774)
382 smart00220 S_TKc Serine/Threon 100.0 3.7E-34 8.1E-39 279.7 24.7 242 35-316 1-244 (244)
383 KOG4250 TANK binding protein k 100.0 1.1E-35 2.3E-40 317.9 14.7 270 20-306 10-297 (732)
384 PLN03224 probable serine/threo 100.0 8.4E-34 1.8E-38 307.9 27.6 277 21-317 143-504 (507)
385 KOG1095 Protein tyrosine kinas 100.0 1.4E-34 3.1E-39 326.1 22.3 252 22-312 691-956 (1025)
386 KOG1027 Serine/threonine prote 100.0 8.3E-35 1.8E-39 315.0 11.6 250 27-320 513-774 (903)
387 KOG4278 Protein tyrosine kinas 100.0 6.5E-33 1.4E-37 290.2 23.9 246 23-310 267-516 (1157)
388 KOG0576 Mitogen-activated prot 100.0 2.1E-34 4.5E-39 304.8 10.7 263 20-318 12-276 (829)
389 KOG0199 ACK and related non-re 100.0 7.2E-34 1.6E-38 301.3 13.4 256 23-317 110-372 (1039)
390 KOG4257 Focal adhesion tyrosin 100.0 1.6E-33 3.5E-38 295.4 15.2 246 26-312 392-644 (974)
391 KOG0196 Tyrosine kinase, EPH ( 100.0 1.1E-33 2.4E-38 303.6 12.6 257 16-312 622-886 (996)
392 KOG1094 Discoidin domain recep 100.0 3.3E-33 7.3E-38 291.6 15.4 261 23-318 538-803 (807)
393 KOG0984 Mitogen-activated prot 100.0 2.4E-33 5.3E-38 260.5 12.5 208 26-243 49-265 (282)
394 KOG1152 Signal transduction se 100.0 4.7E-33 1E-37 290.4 10.7 199 23-232 561-770 (772)
395 PLN00113 leucine-rich repeat r 100.0 4.7E-32 1E-36 320.0 19.8 253 23-313 690-947 (968)
396 KOG3653 Transforming growth fa 100.0 1.8E-31 3.9E-36 273.9 16.0 268 22-310 209-496 (534)
397 KOG2052 Activin A type IB rece 100.0 1.4E-30 3E-35 265.6 18.4 273 8-311 196-497 (513)
398 cd00180 PKc Catalytic domain o 100.0 2.4E-29 5.1E-34 239.1 22.4 212 31-314 1-215 (215)
399 KOG0200 Fibroblast/platelet-de 100.0 1.6E-29 3.5E-34 282.6 23.4 247 26-312 299-574 (609)
400 smart00221 STYKc Protein kinas 100.0 7E-29 1.5E-33 240.6 22.0 200 25-233 1-202 (225)
401 PLN00181 protein SPA1-RELATED; 100.0 1.4E-30 3E-35 301.0 11.1 208 78-319 28-271 (793)
402 KOG1345 Serine/threonine kinas 100.0 2.1E-30 4.5E-35 249.6 8.6 259 21-316 22-290 (378)
403 KOG1025 Epidermal growth facto 100.0 4.5E-29 9.9E-34 268.9 16.0 247 26-312 699-952 (1177)
404 KOG0590 Checkpoint kinase and 100.0 4.7E-29 1E-33 276.2 6.8 267 26-322 321-594 (601)
405 smart00750 KIND kinase non-cat 99.9 2E-27 4.4E-32 223.7 13.3 165 111-317 1-169 (176)
406 COG0515 SPS1 Serine/threonine 99.9 3.8E-25 8.2E-30 222.3 26.5 265 25-319 2-281 (384)
407 PRK09188 serine/threonine prot 99.9 2.4E-25 5.2E-30 232.5 16.5 168 21-203 16-194 (365)
408 KOG1164 Casein kinase (serine/ 99.9 5.5E-24 1.2E-28 220.9 23.0 255 24-312 19-292 (322)
409 KOG1024 Receptor-like protein 99.9 1E-24 2.2E-29 219.3 14.9 253 22-312 283-550 (563)
410 KOG1163 Casein kinase (serine/ 99.9 1.9E-23 4.2E-28 198.6 14.3 214 17-241 9-231 (341)
411 KOG0603 Ribosomal protein S6 k 99.9 5.2E-25 1.1E-29 234.4 2.6 242 30-322 1-252 (612)
412 KOG1165 Casein kinase (serine/ 99.9 6.9E-23 1.5E-27 202.8 16.4 241 20-271 25-279 (449)
413 KOG0606 Microtubule-associated 99.9 1.3E-23 2.9E-28 233.3 12.2 230 20-322 80-324 (1205)
414 PF14531 Kinase-like: Kinase-l 99.9 6.7E-23 1.5E-27 206.1 14.8 240 24-304 13-288 (288)
415 KOG1240 Protein kinase contain 99.9 1.3E-23 2.9E-28 233.4 7.7 252 24-313 24-291 (1431)
416 cd05147 RIO1_euk RIO kinase fa 99.9 1.1E-22 2.3E-27 195.2 10.8 140 28-176 2-167 (190)
417 PRK10359 lipopolysaccharide co 99.9 2.8E-22 6.1E-27 195.9 12.2 176 22-225 30-216 (232)
418 cd05145 RIO1_like RIO kinase f 99.9 1.5E-21 3.2E-26 187.3 14.1 141 27-176 1-167 (190)
419 KOG4158 BRPK/PTEN-induced prot 99.9 1.6E-21 3.5E-26 196.9 12.3 255 23-308 157-505 (598)
420 PRK12274 serine/threonine prot 99.8 2E-20 4.3E-25 179.6 13.5 192 26-235 5-211 (218)
421 KOG1023 Natriuretic peptide re 99.8 1.4E-20 3.1E-25 200.5 12.0 309 76-431 1-318 (484)
422 PRK10345 hypothetical protein; 99.8 6.1E-20 1.3E-24 178.4 14.5 136 28-173 7-156 (210)
423 KOG1166 Mitotic checkpoint ser 99.8 6.8E-20 1.5E-24 207.7 15.2 193 22-228 697-900 (974)
424 smart00090 RIO RIO-like kinase 99.8 1.3E-19 2.7E-24 179.9 11.4 148 20-175 25-197 (237)
425 KOG1033 eIF-2alpha kinase PEK/ 99.8 2.3E-20 5.1E-25 195.7 6.4 254 23-316 244-515 (516)
426 KOG0590 Checkpoint kinase and 99.8 2.5E-20 5.4E-25 206.9 0.9 265 22-318 19-291 (601)
427 PRK14879 serine/threonine prot 99.8 2.9E-18 6.2E-23 166.5 13.6 135 29-175 2-143 (211)
428 KOG0195 Integrin-linked kinase 99.7 1.9E-18 4.1E-23 167.1 7.5 242 24-311 191-440 (448)
429 cd05144 RIO2_C RIO kinase fami 99.7 1.2E-17 2.5E-22 161.1 10.8 138 23-176 15-175 (198)
430 TIGR03724 arch_bud32 Kae1-asso 99.7 1.6E-17 3.5E-22 159.8 10.6 131 30-175 1-138 (199)
431 PRK09605 bifunctional UGMP fam 99.7 5.7E-17 1.2E-21 179.6 12.4 138 23-176 333-477 (535)
432 cd05119 RIO RIO kinase family, 99.7 1.2E-16 2.6E-21 152.1 11.4 136 28-176 2-164 (187)
433 KOG0601 Cyclin-dependent kinas 99.7 5.7E-17 1.2E-21 173.2 7.1 256 24-319 115-385 (524)
434 PRK01723 3-deoxy-D-manno-octul 99.6 2.3E-15 5E-20 149.6 14.4 139 29-175 37-191 (239)
435 cd05120 APH_ChoK_like Aminogly 99.6 6.9E-15 1.5E-19 133.0 11.3 131 27-175 2-138 (155)
436 KOG0606 Microtubule-associated 99.5 2.4E-15 5.1E-20 168.3 4.5 264 22-320 803-1099(1205)
437 KOG1266 Protein kinase [Signal 99.5 1.5E-14 3.2E-19 143.9 2.7 246 38-320 81-338 (458)
438 KOG1243 Protein kinase [Genera 99.5 1.7E-12 3.6E-17 140.5 17.8 184 25-227 15-199 (690)
439 cd05146 RIO3_euk RIO kinase fa 99.4 1.4E-12 3E-17 125.0 11.1 139 28-176 2-174 (197)
440 PRK04750 ubiB putative ubiquin 99.4 3.6E-13 7.7E-18 147.4 7.8 140 25-176 122-314 (537)
441 cd05151 ChoK Choline Kinase (C 99.4 2.3E-12 4.9E-17 120.3 9.8 126 28-174 3-135 (170)
442 TIGR01982 UbiB 2-polyprenylphe 99.4 5.5E-12 1.2E-16 136.1 13.1 140 29-176 123-307 (437)
443 KOG0601 Cyclin-dependent kinas 99.3 1.2E-12 2.6E-17 140.3 7.5 250 23-317 265-518 (524)
444 KOG3741 Poly(A) ribonuclease s 99.2 5.9E-10 1.3E-14 117.6 17.0 215 35-313 288-521 (655)
445 KOG3087 Serine/threonine prote 99.2 4.3E-10 9.4E-15 104.6 12.9 142 27-175 11-165 (229)
446 COG3642 Mn2+-dependent serine/ 99.1 4.5E-10 9.8E-15 104.9 12.4 130 29-175 2-140 (204)
447 cd05154 ACAD10_11_like Acyl-Co 99.1 7.7E-10 1.7E-14 107.5 12.0 142 29-175 4-206 (223)
448 KOG2137 Protein kinase [Signal 99.1 8.7E-11 1.9E-15 127.8 4.4 155 135-318 108-270 (700)
449 PRK15123 lipopolysaccharide co 99.0 3.7E-09 8.1E-14 106.7 14.3 135 38-174 37-193 (268)
450 PF06293 Kdo: Lipopolysacchari 99.0 5.9E-09 1.3E-13 101.4 12.8 129 46-175 30-170 (206)
451 PF01163 RIO1: RIO1 family; I 98.9 4E-09 8.7E-14 100.7 10.2 127 38-176 1-156 (188)
452 PRK09902 hypothetical protein; 98.7 1.2E-07 2.6E-12 91.5 12.7 143 31-175 26-179 (216)
453 COG4248 Uncharacterized protei 98.7 2.3E-07 5.1E-12 96.1 13.9 266 16-309 6-292 (637)
454 COG0478 RIO-like serine/threon 98.7 9.6E-08 2.1E-12 94.4 9.9 137 23-174 91-250 (304)
455 PF06176 WaaY: Lipopolysacchar 98.6 7.8E-07 1.7E-11 86.3 12.3 143 22-175 30-183 (229)
456 KOG1035 eIF-2alpha kinase GCN2 98.4 2.2E-06 4.8E-11 98.6 11.4 204 69-318 229-439 (1351)
457 PF01636 APH: Phosphotransfera 98.3 5.8E-06 1.3E-10 80.5 12.8 139 28-174 2-196 (239)
458 COG0661 AarF Predicted unusual 98.3 1.6E-06 3.5E-11 94.8 8.3 151 11-176 120-315 (517)
459 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 9.2E-06 2E-10 80.1 12.8 132 29-174 7-181 (226)
460 COG1718 RIO1 Serine/threonine 98.2 9.5E-06 2.1E-10 79.7 11.5 143 22-176 44-216 (268)
461 COG2112 Predicted Ser/Thr prot 98.1 1.3E-05 2.7E-10 74.9 8.8 129 25-175 24-155 (201)
462 KOG0576 Mitogen-activated prot 98.1 8.6E-07 1.9E-11 96.2 1.1 243 25-319 244-490 (829)
463 cd05150 APH Aminoglycoside 3'- 98.0 6.3E-05 1.4E-09 74.7 11.7 133 30-174 5-192 (244)
464 PF13095 FTA2: Kinetochore Sim 98.0 4.3E-05 9.3E-10 73.4 9.8 143 10-173 26-206 (207)
465 PLN02876 acyl-CoA dehydrogenas 97.9 0.0001 2.2E-09 86.2 13.8 146 27-175 42-257 (822)
466 KOG1093 Predicted protein kina 97.9 8.6E-05 1.9E-09 79.4 10.5 176 65-319 25-200 (725)
467 cd05155 APH_ChoK_like_1 Unchar 97.8 0.00014 3E-09 72.0 10.8 30 145-174 164-193 (235)
468 PF10707 YrbL-PhoP_reg: PhoP r 97.8 0.0004 8.6E-09 67.0 12.9 128 29-169 7-165 (199)
469 KOG1826 Ras GTPase activating 97.7 2.1E-05 4.5E-10 92.5 3.4 154 70-231 1277-1440(2724)
470 KOG1235 Predicted unusual prot 97.7 0.00029 6.2E-09 77.2 12.0 139 29-176 167-355 (538)
471 cd05157 ETNK_euk Ethanolamine 97.6 0.00068 1.5E-08 66.8 11.4 72 28-111 3-76 (235)
472 PF12260 PIP49_C: Protein-kina 97.5 0.00026 5.6E-09 67.8 7.7 97 71-176 8-112 (188)
473 TIGR00938 thrB_alt homoserine 97.5 0.00069 1.5E-08 69.8 11.1 150 15-174 15-216 (307)
474 PRK05231 homoserine kinase; Pr 97.4 0.0013 2.8E-08 68.1 11.7 150 16-174 16-216 (319)
475 PRK09550 mtnK methylthioribose 97.4 0.0029 6.2E-08 67.5 14.3 77 28-111 31-115 (401)
476 TIGR02721 ycfN_thiK thiamine k 97.4 0.00065 1.4E-08 68.0 8.7 130 31-174 4-174 (256)
477 cd05153 HomoserineK_II Homoser 97.2 0.0013 2.7E-08 67.3 9.3 150 16-174 8-204 (296)
478 cd05156 ChoK_euk Choline Kinas 97.2 0.002 4.4E-08 66.0 9.9 72 28-111 3-81 (302)
479 COG3173 Predicted aminoglycosi 97.2 0.0054 1.2E-07 63.4 12.7 145 25-175 27-228 (321)
480 PRK10593 hypothetical protein; 97.1 0.0069 1.5E-07 62.3 12.9 80 24-111 15-97 (297)
481 KOG2270 Serine/threonine prote 97.0 0.0033 7.2E-08 65.2 9.3 144 22-174 143-312 (520)
482 TIGR02904 spore_ysxE spore coa 96.9 0.01 2.2E-07 61.3 12.3 29 146-174 197-225 (309)
483 cd05152 MPH2' Macrolide 2'-Pho 96.8 0.0067 1.5E-07 61.7 10.0 30 146-175 186-216 (276)
484 TIGR01767 MTRK 5-methylthiorib 96.8 0.012 2.6E-07 61.7 11.7 82 30-118 2-93 (370)
485 KOG2268 Serine/threonine prote 96.7 0.0019 4E-08 66.0 4.8 136 23-174 92-250 (465)
486 TIGR02906 spore_CotS spore coa 96.6 0.022 4.7E-07 58.5 12.4 28 145-173 187-214 (313)
487 PRK12396 5-methylribose kinase 96.4 0.024 5.1E-07 60.3 11.1 91 20-118 27-126 (409)
488 PLN02421 phosphotransferase, a 96.3 0.048 1E-06 57.0 12.6 146 15-173 5-211 (330)
489 PLN02236 choline kinase 96.1 0.05 1.1E-06 57.1 11.6 141 21-174 35-230 (344)
490 PLN02756 S-methyl-5-thioribose 96.0 0.09 2E-06 56.2 12.9 76 27-111 36-119 (418)
491 COG5072 ALK1 Serine/threonine 95.3 0.036 7.7E-07 57.8 6.4 74 98-176 297-371 (488)
492 PTZ00384 choline kinase; Provi 94.6 0.21 4.6E-06 53.2 10.3 28 145-173 227-254 (383)
493 PRK11768 serine/threonine prot 94.6 0.57 1.2E-05 48.7 13.2 72 34-111 36-111 (325)
494 PF07387 Seadorna_VP7: Seadorn 94.4 0.16 3.5E-06 49.6 7.7 101 49-173 86-190 (308)
495 PRK06148 hypothetical protein; 94.0 0.42 9.2E-06 57.4 12.2 31 145-175 203-236 (1013)
496 PHA03111 Ser/Thr kinase; Provi 93.9 0.15 3.2E-06 52.6 6.8 76 101-176 249-351 (444)
497 PF05445 Pox_ser-thr_kin: Poxv 93.4 0.14 3.1E-06 53.0 5.6 75 102-176 246-347 (434)
498 PTZ00296 choline kinase; Provi 92.7 0.95 2.1E-05 49.2 11.3 27 146-173 285-311 (442)
499 PF03881 Fructosamin_kin: Fruc 92.7 0.97 2.1E-05 46.2 10.7 75 24-110 18-95 (288)
500 KOG2269 Serine/threonine prote 91.8 0.19 4.1E-06 51.7 4.2 136 26-174 255-431 (531)
No 1
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-78 Score=601.20 Aligned_cols=342 Identities=60% Similarity=0.995 Sum_probs=324.7
Q ss_pred cccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 17 ~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
+.|.++.+|..++.||+|+||+||.|.++.||+.||||+|.+.|.+..++++.+||+++|+.++|+||+.+++++..+..
T Consensus 16 ~~~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~ 95 (359)
T KOG0660|consen 16 ELFEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR 95 (359)
T ss_pred eEEeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence 44777888888999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred CCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 97 REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 97 ~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+.++++|+|+|+|+.||+++|+.+..+++++++++++|||+||+|+|+++|+||||||.|+|+|.+|.+||||||||+..
T Consensus 96 ~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~ 175 (359)
T KOG0660|consen 96 DKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL 175 (359)
T ss_pred cccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence 88999999999999999999999988999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... ....+++.|+.|+||+|||++... ..|+.++||||+||||+|||+|+++|+|++..+|+.+|.+++|+|+.+.+.
T Consensus 176 ~~~-~~~~~mTeYVaTRWYRAPElll~~-~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~ 253 (359)
T KOG0660|consen 176 DKF-FEDGFMTEYVATRWYRAPELLLNS-SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQ 253 (359)
T ss_pred ccc-CcccchhcceeeeeecCHHHHhcc-ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHH
Confidence 665 566778999999999999999764 789999999999999999999999999999999999999999999999999
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchh
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEF 336 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~ 336 (560)
.+.+++++.|+++++...+.+|...|+++++.++|||++||.+||.+|+|++|+|+||||..++.++.||++++....
T Consensus 254 ~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~~~~~~~-- 331 (359)
T KOG0660|consen 254 KIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVCQPIFDS-- 331 (359)
T ss_pred HhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCCCCCCcc--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988886554
Q ss_pred hHHhhcCCHHHHHHHHHHHHHhhChhHH
Q 008607 337 EFERRRITKEDVRELIYREILEYHPQML 364 (560)
Q Consensus 337 ~~e~~~~~~e~~~e~i~~ei~~~~p~~~ 364 (560)
++.. .+.+++++++|+|+++|+|...
T Consensus 332 -~~~~-~~~~~~r~~i~~e~~~~~~~~~ 357 (359)
T KOG0660|consen 332 -FEHE-LTEEELRELIYKEILDFHPDVS 357 (359)
T ss_pred -cccc-ccHHHHHHHHHHHHHhhCcccc
Confidence 4444 8999999999999999999754
No 2
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.2e-61 Score=469.20 Aligned_cols=286 Identities=37% Similarity=0.707 Sum_probs=245.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|+.+.++|+|+||+||+|+++.||+.||||++.....+..-.+-.+|||++|++|+|+|+|.++++| +....+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF-----rrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF-----RRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH-----Hhccee
Confidence 469999999999999999999999999999999986555555556678999999999999999999999 344569
Q ss_pred EEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
++|||||+.++.+.+... ..++++.++.+++|++.|+.|||+++||||||||+||||+.+|.+||||||+|+....
T Consensus 77 hLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~--- 153 (396)
T KOG0593|consen 77 HLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA--- 153 (396)
T ss_pred EEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC---
Confidence 999999998877777664 4699999999999999999999999999999999999999999999999999998753
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
....+++|+.|+||+|||++.+. ..|++.+|||++||+++||++|.++|+|.++.+|+..|.+.+|.-.+.-..-....
T Consensus 154 pgd~YTDYVATRWYRaPELLvGD-tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 154 PGDNYTDYVATRWYRAPELLVGD-TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred CcchhhhhhhhhhccChhhhccc-CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 23356899999999999999774 68999999999999999999999999999999999999999998776544322211
Q ss_pred HHHHHHHhhc---cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 262 KARRYLSSMR---KKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 262 ~~~~~l~~~~---~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.++..+. ...+.++...+++++..+.||+++||..||.+|++.+|+|.|+||.++.
T Consensus 233 ---~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~ 291 (396)
T KOG0593|consen 233 ---PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFI 291 (396)
T ss_pred ---CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHH
Confidence 1222221 1233455678899999999999999999999999999999999997543
No 3
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.4e-59 Score=482.13 Aligned_cols=338 Identities=94% Similarity=1.478 Sum_probs=308.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.++||+|+||.||+|++..+|..||||++...........++.+|+.+|+.++||||+++++++..........+|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 69999999999999999999999999999999976555555667789999999999999999999998766555566799
Q ss_pred EEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 104 VVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
+|||||+++|.+++..+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 81 lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~ 160 (338)
T cd07859 81 VVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 160 (338)
T ss_pred EEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCcc
Confidence 99999999999999988889999999999999999999999999999999999999999999999999998654443333
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
..+...+||++|+|||++.+....++.++|||||||++|+|++|++||.+.+...++..+.+.+|.|..+.+..+.....
T Consensus 161 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 240 (338)
T cd07859 161 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKA 240 (338)
T ss_pred ccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhH
Confidence 34466789999999999865435788999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhHHhhcC
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRI 343 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~e~~~~ 343 (560)
..++..+....+.++...++..++.+.+||.+||+.||.+|||++|+|+||||+++......+..++...+++.++++.+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (338)
T cd07859 241 RRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSAQPITKLEFEFERRRL 320 (338)
T ss_pred HHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCccccccccCccccccccHHHHhc
Confidence 88999888888888888888999999999999999999999999999999999999998888999999999999999999
Q ss_pred CHHHHHHHHHHHHHhhCh
Q 008607 344 TKEDVRELIYREILEYHP 361 (560)
Q Consensus 344 ~~e~~~e~i~~ei~~~~p 361 (560)
+++++++.+++++++|||
T Consensus 321 ~~~~~~~~~~~~~~~~~~ 338 (338)
T cd07859 321 TKEDVRELIYREILEYHP 338 (338)
T ss_pred CHHHHHHHHHHHHHhcCC
Confidence 999999999999999997
No 4
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.1e-60 Score=454.44 Aligned_cols=288 Identities=42% Similarity=0.708 Sum_probs=250.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.+|..+++||+|.||+||+|+|..||+.||||+|+.......-....+|||++|+.++|+||+.++++|.+. ..+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~-----~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHK-----SNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCC-----Cce
Confidence 579999999999999999999999999999999986544444456778999999999999999999999554 368
Q ss_pred EEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
.||+|||+.||..+|+... .++..+++.|+.++++||+|||+++|+||||||.|+||+.+|.+||+|||+|+.......
T Consensus 77 ~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 77 SLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred EEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9999999999999998765 699999999999999999999999999999999999999999999999999998754332
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
. .+..+.|+||+|||++.|. ..|+..+||||.|||++||+.|.+.|+|.++.+|+..|...+|+|.++.|..+..-
T Consensus 157 ~---~~~~V~TRWYRAPELLfGs-r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 157 I---QTHQVVTRWYRAPELLFGS-RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred c---cccceeeeeccChHHhccc-hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 2 2445899999999999774 68999999999999999999999999999999999999999999999988776542
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
.+|.+ +......+....|+.++..+.||+.+||.+||.+|+|+.|+|+|+||+....+
T Consensus 233 --pdY~~-~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p 290 (318)
T KOG0659|consen 233 --PDYVK-IQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP 290 (318)
T ss_pred --ccHHH-HhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence 22222 11223334455899999999999999999999999999999999999975433
No 5
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-60 Score=487.48 Aligned_cols=289 Identities=39% Similarity=0.699 Sum_probs=253.6
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~ 99 (560)
+-+||.++++||.|+||.||+|..+.+|+.||||++++.+....+... +||++.|++|. |||||+|++++.+..
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-LREvksL~kln~hpniikL~Evi~d~~---- 82 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-LREVKSLRKLNPHPNIIKLKEVIRDND---- 82 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccC----
Confidence 346899999999999999999999999999999999987776555544 58999999999 999999999995433
Q ss_pred ccEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|||||+.+|+++++.++ .|++..++.|++||++||+|+|++|++||||||+||||..+..|||+||||||...+
T Consensus 83 ~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 83 RILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred ceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEeccccccccccc
Confidence 3799999999999999998765 599999999999999999999999999999999999999999999999999997655
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
..+ ++.|+.|+||+|||+|... ..|+.++|||++|||++|+.+-+++|+|.+..||+.+|++++|+|..+.+...
T Consensus 163 kpP----YTeYVSTRWYRAPEvLLrs-~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 163 KPP----YTEYVSTRWYRAPEVLLRS-GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred CCC----cchhhhcccccchHHhhhc-cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence 443 5889999999999998653 68999999999999999999999999999999999999999999998877543
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
- ..+...--.+....+.++...++.+++++.+||.+||.+||.+||||+|+|+||||+.-.
T Consensus 238 ~-~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 238 Y-NLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred H-HHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 1 111111113445667778888999999999999999999999999999999999998543
No 6
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.7e-60 Score=486.35 Aligned_cols=287 Identities=37% Similarity=0.609 Sum_probs=250.5
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.+.|+.+++||+|.||.||+|++..||+.||+|++..............|||.||+.|.||||++|.++.+.. ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 3679999999999999999999999999999999987666667777788999999999999999999998765 2357
Q ss_pred EEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|||||||+.||..++...+ .|++.+++.|+.||+.||.|||++||+|||||.+|||||.+|.+||+|||||+++....
T Consensus 193 iYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~ 272 (560)
T KOG0600|consen 193 IYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG 272 (560)
T ss_pred EEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence 99999999999999998754 79999999999999999999999999999999999999999999999999999875444
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.. .++..+.|+||+|||+|.|. ..|+.++|+||+||||.||++|++.|.|.+.++|+.+|.+++|.|..+.|....-
T Consensus 273 ~~--~~T~rVvTLWYRpPELLLG~-t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kL 349 (560)
T KOG0600|consen 273 SA--PYTSRVVTLWYRPPELLLGA-TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKL 349 (560)
T ss_pred Cc--ccccceEEeeccChHHhcCC-cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccC
Confidence 33 36889999999999999874 7899999999999999999999999999999999999999999999988773222
Q ss_pred HHHHHHHHhhccC--CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 261 EKARRYLSSMRKK--KPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 261 ~~~~~~l~~~~~~--~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
. +...+... ....+.+.|..+++.+++|+..||..||.+|.||.++|+|+||..
T Consensus 350 P----~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t 405 (560)
T KOG0600|consen 350 P----HATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTT 405 (560)
T ss_pred C----cccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccccc
Confidence 1 11111111 122344567788999999999999999999999999999999953
No 7
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-59 Score=461.36 Aligned_cols=294 Identities=38% Similarity=0.607 Sum_probs=253.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
...-+.|+.+.+|++|+||+||+|+|+.|++.||+|+++..-......-.-+|||++|.+++|||||.+..+.+....
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~-- 149 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNM-- 149 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecccc--
Confidence 344578999999999999999999999999999999998655555555567899999999999999999999876543
Q ss_pred CccEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
+.+|||||||+.||..++.... +|...+++.++.|+|+||+|||.++|+||||||+|+|++..|.+|||||||||.+.
T Consensus 150 -d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 150 -DKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred -ceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 5699999999999999998865 89999999999999999999999999999999999999999999999999999875
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
+.. ..++..+.|.||+|||+|.+. ..|+.++|+||+|||++||++++++|+|+...+|+++|.+++|+|+...|..
T Consensus 229 sp~---k~~T~lVVTLWYRaPELLLG~-~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 229 SPL---KPYTPLVVTLWYRAPELLLGA-KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred CCc---ccCcceEEEeeecCHHHhcCC-cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCC
Confidence 542 235788999999999999874 7899999999999999999999999999999999999999999999988876
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCC--CHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNA--NPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~--s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.....+.+.+. +.......+...|+.. +....+|+..+|.+||.+|.||+|+|+|.||....
T Consensus 305 ~~~lp~~k~~~-f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 305 YSELPAVKKMT-FSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred ccccchhhccc-cCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 65544333221 1222223344455544 58999999999999999999999999999999743
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-57 Score=456.58 Aligned_cols=262 Identities=35% Similarity=0.603 Sum_probs=220.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh-----hHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-----SDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~-----~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.+.|.+.+.||+|+||.|.+|+++.||+.||||+|++..... .....+.+|+++|++|+|||||+++++|..+
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~-- 248 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP-- 248 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC--
Confidence 456999999999999999999999999999999998543222 1234467999999999999999999999544
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC---CcEEEecccc
Q 008607 97 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFGL 172 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~---~~lKL~DFGl 172 (560)
...|||||||+ |+|.+.+..++.+.++..+.+++||+.||.|||++||+||||||+|||++.+ +.+||+|||+
T Consensus 249 ---ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 249 ---DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ---CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 35799999998 5999999999999999999999999999999999999999999999999877 8899999999
Q ss_pred cccccCCCCCcccccccccCcccccccccccccCC-CCCccchhhHHHHHHHHhhCCCCCCCCChhh-HHHHHHHhcCCC
Q 008607 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAELLTGKPLFPGKNVVH-QLDIMTDLLGTP 250 (560)
Q Consensus 173 a~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~-y~~~~DIWSlG~il~eLltG~~pF~~~~~~~-~~~~i~~~~g~p 250 (560)
|+.... ..++.+.|||+.|.|||++.+.... |..++|||||||+||.+|+|.+||.+....- ..++|.+
T Consensus 326 AK~~g~----~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~----- 396 (475)
T KOG0615|consen 326 AKVSGE----GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK----- 396 (475)
T ss_pred hhcccc----ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc-----
Confidence 998653 3466889999999999999653233 3448999999999999999999998765333 2222221
Q ss_pred CHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 251 SPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
......+..|..++.++++||.+||..||++|||++|+|+||||+..
T Consensus 397 ----------------------G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~ 443 (475)
T KOG0615|consen 397 ----------------------GRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDA 443 (475)
T ss_pred ----------------------CcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence 12222334566789999999999999999999999999999999853
No 9
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.1e-56 Score=445.25 Aligned_cols=286 Identities=39% Similarity=0.679 Sum_probs=247.2
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|+-.+++|+|+||+||.|....+++.||||++-.. ..--.+|+.+|+.+.|||||++...|......+.-++.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d------~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD------KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC------CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 588899999999999999999999999999998521 11223799999999999999999988765433334667
Q ss_pred EEEecCCccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccccccccC
Q 008607 104 VVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFN 178 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGla~~~~~ 178 (560)
+|||||+.+|.++++. +..++.-.++-+++||++||+|||+.||+||||||+|||+|.+ |.+||||||.|+....
T Consensus 99 lVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~ 178 (364)
T KOG0658|consen 99 LVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK 178 (364)
T ss_pred HHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence 8999999999999984 5679999999999999999999999999999999999999987 9999999999999877
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
+.++ .+|..|+.|+|||++.+. ..|+.++||||.||+++||+.|++.|+|++..+|+.+|.+++|+|+.+.+..+
T Consensus 179 ~epn----iSYicSRyYRaPELifga-~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~m 253 (364)
T KOG0658|consen 179 GEPN----ISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSM 253 (364)
T ss_pred CCCc----eeEEEeccccCHHHHcCc-cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhc
Confidence 7765 568999999999999874 78999999999999999999999999999999999999999999999999877
Q ss_pred hhHHHHHHHHhhccCCCCCCCC-CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccC
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQ-KFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVE 323 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~-~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~ 323 (560)
...... ..+......++.. .+...++++.+|+.++|+++|.+|.++-|+|+||||..+....
T Consensus 254 n~~y~~---~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~~ 316 (364)
T KOG0658|consen 254 NPNYTE---FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDPN 316 (364)
T ss_pred Cccccc---ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCcC
Confidence 654221 1122233344444 5567899999999999999999999999999999999887653
No 10
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-54 Score=453.99 Aligned_cols=263 Identities=33% Similarity=0.571 Sum_probs=231.7
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecC-cccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~-~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
..+|+..+.||+|+|+.||.+++..+|+.||+|+|.+ ...+......+.+||+|.+.|+|||||++++.| ++.+
T Consensus 17 ~~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F-----EDs~ 91 (592)
T KOG0575|consen 17 SKRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF-----EDSN 91 (592)
T ss_pred cceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe-----ecCC
Confidence 3789999999999999999999999999999999975 334555677899999999999999999999999 5556
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++|||+|+|. ++|..+++++..++|.++++|++||+.||.|||+.+|+|||||..|||++++..|||+|||||.....+
T Consensus 92 nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 92 NVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred ceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 8999999999 799999999999999999999999999999999999999999999999999999999999999987644
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
... ..+.||||.|.|||++.. ..++..+||||+|||||.||.|+|||..++..+.+..|...-
T Consensus 172 ~Er---k~TlCGTPNYIAPEVl~k--~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~------------ 234 (592)
T KOG0575|consen 172 GER---KKTLCGTPNYIAPEVLNK--SGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNE------------ 234 (592)
T ss_pred ccc---cceecCCCcccChhHhcc--CCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcC------------
Confidence 322 367899999999999986 689999999999999999999999999999888887775410
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCC
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVERE 325 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~ 325 (560)
| .....++..|+|||.+||+.||.+|||++++|.|+||+.-..+...
T Consensus 235 ------Y-------------~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~l 281 (592)
T KOG0575|consen 235 ------Y-------------SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARL 281 (592)
T ss_pred ------c-------------ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCC
Confidence 0 1113678999999999999999999999999999999544333333
No 11
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-54 Score=433.92 Aligned_cols=292 Identities=38% Similarity=0.675 Sum_probs=248.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC-ccccceeecCCCc-CCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD-IVEIKHILLPPSR-REFK 100 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn-Iv~l~~i~~~~~~-~~~~ 100 (560)
..|+.+++||+|+||+||+|+++.+|+.||+|+++.....+.-.....||+.+|+.|+|+| |+.+++++.+... +...
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 4578888999999999999999999999999999865544334455689999999999999 9999999976542 2334
Q ss_pred cEEEEEecCCccHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 101 DIYVVFELMESDLHQVIKAND----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~~----~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
.+|+||||++.||..++.... .++...++.|++||++||+|||++||+||||||+||||+.+|.+||+|||+|+..
T Consensus 91 ~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~ 170 (323)
T KOG0594|consen 91 KLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAF 170 (323)
T ss_pred eEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHh
Confidence 689999999999999998755 5888999999999999999999999999999999999999999999999999964
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.-.. ...+..++|.||+|||++.+. ..|+..+||||+|||++||++++++|+|.+..+|+..|.+++|+|+.+.|.
T Consensus 171 ~ip~---~~yt~evvTlWYRaPEvLlGs-~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp 246 (323)
T KOG0594|consen 171 SIPM---RTYTPEVVTLWYRAPEVLLGS-TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP 246 (323)
T ss_pred cCCc---ccccccEEEeeccCHHHhcCC-CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence 3222 125778999999999999874 579999999999999999999999999999999999999999999988876
Q ss_pred HhhhHHHHHHHHhhccCC-CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 257 RVRNEKARRYLSSMRKKK-PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.+..-...+. .+.... +.++....+..++.+.+|+.+||+.||.+|.|++.+|.||||..+.
T Consensus 247 ~v~~~~~~k~--~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 247 GVSSLPDYKA--PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred Cccccccccc--cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 6543211111 223333 5666677778889999999999999999999999999999999764
No 12
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-53 Score=423.16 Aligned_cols=260 Identities=28% Similarity=0.494 Sum_probs=223.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+..+.++.||+|+.|+||+|+|+.|++.+|+|+|.. ..+....+++.+|+++|+..+||+||.+|++|+.... .+
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~-~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~i 153 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILL-NIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EI 153 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecc-cCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eE
Confidence 367788999999999999999999999999999953 3455677889999999999999999999999976531 59
Q ss_pred EEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||+ |+|..+++..++++|..+..++.+|++||.|||. .+||||||||+|||||..|.|||||||.+....+.
T Consensus 154 sI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred EeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 99999999 5999999998999999999999999999999995 99999999999999999999999999999877554
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC--ChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK--NVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~--~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
...+++||..|||||.+.+ ..|+.++||||||+.+.||.+|+.||... ...+.+.++..++..|++
T Consensus 233 ----~a~tfvGT~~YMsPERi~g--~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP------ 300 (364)
T KOG0581|consen 233 ----IANTFVGTSAYMSPERISG--ESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPP------ 300 (364)
T ss_pred ----hcccccccccccChhhhcC--CcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCC------
Confidence 2367899999999999988 68999999999999999999999999874 233334433333332222
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.+... .+|+++++||..||++||.+|+|+.|+|+|||+++..
T Consensus 301 ------------------~lP~~--~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 301 ------------------RLPEG--EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred ------------------CCCcc--cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 11111 4799999999999999999999999999999998654
No 13
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-53 Score=416.28 Aligned_cols=343 Identities=38% Similarity=0.689 Sum_probs=294.6
Q ss_pred cccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC-
Q 008607 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS- 95 (560)
Q Consensus 17 ~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~- 95 (560)
+.|.+..||.-++.+|.|+- .|..|.|..++..||+|++...+.+.....+..||+.++..+.|+||++++.+|.+..
T Consensus 11 s~ftv~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 11 STFTVPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKT 89 (369)
T ss_pred cceeeeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCcccc
Confidence 34567889999999999999 8999999999999999999888888888899999999999999999999999997643
Q ss_pred cCCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 96 RREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
-.++.++|+|||+|..+|.+++. ..+.-+.+.++++|+++|++|||++||+||||||+||+++.+|.+||+|||+|+.
T Consensus 90 l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~ 167 (369)
T KOG0665|consen 90 LEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLART 167 (369)
T ss_pred HHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcc
Confidence 24567899999999999999998 3588899999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...+ ...++|+.|+.|+|||++.+ ..|...+||||+|||++||++|+.+|+|++..+|..+|.+.+|+|.+.++
T Consensus 168 e~~~----~~mtpyVvtRyyrapevil~--~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 168 EDTD----FMMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred cCcc----cccCchhheeeccCchheec--cCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 4332 35689999999999999988 45999999999999999999999999999999999999999999999999
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCC------------CHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccC
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNA------------NPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVE 323 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~------------s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~ 323 (560)
.++.. .++.|+.++.+.....+...||+. +..++||+.+||..||++|.+++++|+||||+-|. ..
T Consensus 242 ~qL~~-~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw~-~~ 319 (369)
T KOG0665|consen 242 KQLQP-TVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVWY-DP 319 (369)
T ss_pred HHhhH-HHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeeeec-cc
Confidence 88754 467777766666556666555542 45699999999999999999999999999999443 33
Q ss_pred CCCCCCCCCcchhhHHhhcCCHHHHHHHHHHHHHhhChhHHHhhhcC
Q 008607 324 REPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEG 370 (560)
Q Consensus 324 ~~~~~~~~~~~~~~~e~~~~~~e~~~e~i~~ei~~~~p~~~~~~~~~ 370 (560)
.++..++....+..++.+..+.++++++|++|+.+|.+....+.+++
T Consensus 320 ~ev~ap~pe~~d~~~d~~~~t~~e~ke~If~ev~~f~~~~~~~I~~~ 366 (369)
T KOG0665|consen 320 DEVEAPPPEIYDKQLDEREHTIEEWKELIFKEVQRFEEFNKNNIMNG 366 (369)
T ss_pred ccccCCCCchhhhhcccccCCHHHHHHHHHHHHHhhcccccchhhcC
Confidence 44444444455566777888899999999999999988544444443
No 14
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-52 Score=420.43 Aligned_cols=261 Identities=29% Similarity=0.507 Sum_probs=228.0
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
.-..+.|+++++||+|+||+||+++.+.|++.||+|++++.. ....+...+.+|..||..++||.||+++..|.+.
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~--- 97 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTE--- 97 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccC---
Confidence 345678999999999999999999999999999999998532 2334677889999999999999999999999554
Q ss_pred CCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 98 EFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 98 ~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+|+||+.| +|...|++.+.|+|+.+++|+.+|+.||.|||+.||+||||||+|||+|.+|+++|+||||++..
T Consensus 98 --~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 98 --EKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred --CeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 469999999985 99999999999999999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... ..+.|||+.|||||++.+ ..|+.++|.|||||++|+||+|.+||.+.+....++.|...
T Consensus 176 ~~~~~~---t~tfcGT~eYmAPEil~~--~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~---------- 240 (357)
T KOG0598|consen 176 LKDGDA---TRTFCGTPEYMAPEILLG--KGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKG---------- 240 (357)
T ss_pred ccCCCc---cccccCCccccChHHHhc--CCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcC----------
Confidence 433222 245899999999999987 69999999999999999999999999999987776666431
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCC-CCHHHHHHHHHhcccCCCCCC----CHHHHhcCccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPN-ANPLALRLLERMLAFEPKDRP----TAEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~s~~~~dLI~~mL~~DP~~Rp----ta~elL~hp~f~~~~ 320 (560)
+ ....+. ++.++++||+++|..||.+|. ++++|-+||||.++.
T Consensus 241 -----------------k----~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 241 -----------------K----LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred -----------------c----CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 0 112234 789999999999999999995 699999999999754
No 15
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=8.8e-52 Score=439.79 Aligned_cols=284 Identities=36% Similarity=0.650 Sum_probs=239.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-C-----CCccccceeecCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-H-----PDIVEIKHILLPP 94 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-H-----pnIv~l~~i~~~~ 94 (560)
++.+|+|+++||+|+||.|.+|.|..|++.||||+|++ +.....+...|+.+|..|+ | -|+|++++.|...
T Consensus 184 i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN---~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr 260 (586)
T KOG0667|consen 184 IAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKN---KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR 260 (586)
T ss_pred eEEEEEEEEEecccccceeEEEEecCCCcEEEEEeecc---ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence 35689999999999999999999999999999999985 4556677788999999997 4 3799999999654
Q ss_pred CcCCCccEEEEEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC--CcEEEecc
Q 008607 95 SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD--CKLKICDF 170 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~--~~lKL~DF 170 (560)
+++|||+|+++.+|.++|+.+. .|+...++.|+.|||.||.+||+.||||+||||+||||..- +.|||+||
T Consensus 261 -----~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 261 -----NHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred -----cceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEec
Confidence 4699999999999999999876 58999999999999999999999999999999999999864 56999999
Q ss_pred cccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCC
Q 008607 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTP 250 (560)
Q Consensus 171 Gla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p 250 (560)
|.++...... ..|+-++.|+|||++.| ..|+.++||||||||++||++|.++|+|.+..+|+..|.+++|.|
T Consensus 336 GSSc~~~q~v------ytYiQSRfYRAPEVILG--lpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~P 407 (586)
T KOG0667|consen 336 GSSCFESQRV------YTYIQSRFYRAPEVILG--LPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLP 407 (586)
T ss_pred ccccccCCcc------eeeeeccccccchhhcc--CCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCC
Confidence 9998653222 37899999999999998 699999999999999999999999999999999999999999999
Q ss_pred CHHHHHHhhhHHHHHHHHh----------------------------hccCCCC-----CCCCCCC-CCCHHHHHHHHHh
Q 008607 251 SPEAIARVRNEKARRYLSS----------------------------MRKKKPI-----PFSQKFP-NANPLALRLLERM 296 (560)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~----------------------------~~~~~~~-----~~~~~~~-~~s~~~~dLI~~m 296 (560)
+...+....+. ..|++. ....... .+....+ .....+.|||++|
T Consensus 408 p~~mL~~~~~~--~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~ 485 (586)
T KOG0667|consen 408 PPKMLDTAKKA--HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRC 485 (586)
T ss_pred CHHHHHhcccc--ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHH
Confidence 99888765432 222222 1111111 1122222 2235689999999
Q ss_pred cccCCCCCCCHHHHhcCccccccccc
Q 008607 297 LAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 297 L~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
|.+||.+|+|+.|+|+||||.+....
T Consensus 486 L~~dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 486 LEWDPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred hccCchhcCCHHHHhcCccccccccc
Confidence 99999999999999999999976543
No 16
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=9.2e-51 Score=423.26 Aligned_cols=337 Identities=56% Similarity=0.998 Sum_probs=290.9
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
|.++++|++.+.||+|+||+||+|++..+++.||||++............+.+|+.+|+.++|+||+++++++.......
T Consensus 1 ~~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~ 80 (337)
T cd07858 1 FEVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREA 80 (337)
T ss_pred CccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccc
Confidence 45678999999999999999999999999999999998765444455667889999999999999999999886655455
Q ss_pred CccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
...+|+|+||++++|.+++...+.+++..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~ 160 (337)
T cd07858 81 FNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE 160 (337)
T ss_pred cCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence 56799999999999999999888899999999999999999999999999999999999999999999999999976533
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.. .....+.++..|+|||.+... ..++.++|||||||++|+|++|++||.+.+....+..+...+|.+..+.+...
T Consensus 161 ~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07858 161 KG---DFMTEYVVTRWYRAPELLLNC-SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFI 236 (337)
T ss_pred Cc---ccccccccccCccChHHHhcC-CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 21 223456789999999988642 35888999999999999999999999999999999999999999988887777
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhH
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEF 338 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~ 338 (560)
.......++..+.......+...++.+++.+.+||++||+.||.+|||++|+|+||||..+......+..+. .++++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~~~~~~~~~--~~~~~~ 314 (337)
T cd07858 237 RNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDPSDEPVCQT--PFSFDF 314 (337)
T ss_pred CchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCcccCccCCC--ccchhh
Confidence 777777777766555444555566788999999999999999999999999999999998877766655543 457778
Q ss_pred HhhcCCHHHHHHHHHHHHHhhCh
Q 008607 339 ERRRITKEDVRELIYREILEYHP 361 (560)
Q Consensus 339 e~~~~~~e~~~e~i~~ei~~~~p 361 (560)
+....++++++|+|+.|.+.|||
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ 337 (337)
T cd07858 315 EEDALTEEDIKELIYNEMLAYHP 337 (337)
T ss_pred hhhhcCHHHHHHHHHHHHhhcCC
Confidence 88889999999999999999987
No 17
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-52 Score=428.67 Aligned_cols=261 Identities=30% Similarity=0.534 Sum_probs=228.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~ 99 (560)
.+.|.+.+.||+|+|++|++|+++.+++.||||++.+... ......-+.+|-.+|.+| .||.|++|+..|.+.
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~----- 146 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE----- 146 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc-----
Confidence 4679999999999999999999999999999999975432 333445678899999999 799999999999544
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|+||++ |+|.++|++-+.|++...++|+.||+.||+|||++|||||||||+|||+|.|+++||+|||.|+....
T Consensus 147 ~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~ 226 (604)
T KOG0592|consen 147 ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP 226 (604)
T ss_pred cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence 46999999998 79999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred CCCC----------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcC
Q 008607 179 DTPT----------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 179 ~~~~----------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g 248 (560)
.... .....++|||-.|.+||+|.. ...++.+|||+||||||.|+.|.+||.+.|....+++|.++-
T Consensus 227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~--~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~- 303 (604)
T KOG0592|consen 227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND--SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD- 303 (604)
T ss_pred hhccccCccCcccccCcccceeeeecccCHHHhcC--CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc-
Confidence 2111 111256899999999999987 678899999999999999999999999999998888887631
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
. ...++.++.+.|||+++|..||.+|+|++||.+||||.++.
T Consensus 304 ---------------------------y---~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 304 ---------------------------Y---EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ---------------------------c---cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence 1 12246679999999999999999999999999999999764
No 18
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4e-50 Score=419.13 Aligned_cols=330 Identities=45% Similarity=0.833 Sum_probs=271.4
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~ 97 (560)
+.+.++|++++.||+|+||.||+|.+..+++.||||++............+.+|+.+|+.++|+||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 566789999999999999999999999999999999997644444455678899999999999999999998864322 3
Q ss_pred CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 98 ~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
....+|+++++++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~~~~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~ 169 (343)
T cd07878 91 NFNEVYLVTNLMGADLNNIVKC-QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 169 (343)
T ss_pred ccCcEEEEeecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence 3456899999999999888754 469999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.. ...++||++|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....+.+..+.+..
T Consensus 170 ~~------~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T cd07878 170 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKK 242 (343)
T ss_pred CC------cCCccccccccCchHhcCC-ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 22 2456899999999998652 4688999999999999999999999999999999999999999999988888
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhh
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFE 337 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~ 337 (560)
+.......++..+.......+...+...++.+.+||.+||..||.+|||+.|+|+||||..+......+...+. ...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~~~~~~~~~~~~~~---~~~ 319 (343)
T cd07878 243 ISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQYHDPEDEPEAEPY---DES 319 (343)
T ss_pred cchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhccCCCccccccCcc---ccc
Confidence 87777777777666555555555667788999999999999999999999999999999987655444333222 222
Q ss_pred HHhhcCCHHHHHHHHHHHHHhh
Q 008607 338 FERRRITKEDVRELIYREILEY 359 (560)
Q Consensus 338 ~e~~~~~~e~~~e~i~~ei~~~ 359 (560)
.+....+.+++++..+.+...+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~ 341 (343)
T cd07878 320 PENKERTIEEWKELTYEEVSSF 341 (343)
T ss_pred hhhhhccHHHHHHHHHHHHHhc
Confidence 2334555566666666555433
No 19
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.2e-52 Score=405.36 Aligned_cols=292 Identities=38% Similarity=0.630 Sum_probs=241.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCc----EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~----~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
..|++...||+|.||.||+|..++++. .+|||+++.......-.....||+.++|.|+|||++.+..+|+..+
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d--- 100 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHD--- 100 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccC---
Confidence 459999999999999999997766544 6899999754333344456779999999999999999999997643
Q ss_pred CccEEEEEecCCccHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC----CcEEEec
Q 008607 99 FKDIYVVFELMESDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD----CKLKICD 169 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~-----~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~----~~lKL~D 169 (560)
..+++++||.+.||.++|+-+. .++...++.|++||+.|+.|||++.|+||||||.||||..+ |+|||+|
T Consensus 101 -~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 101 -KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred -ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeec
Confidence 4799999999999999997532 48999999999999999999999999999999999999988 8999999
Q ss_pred ccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCC---------hhhHH
Q 008607 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN---------VVHQL 240 (560)
Q Consensus 170 FGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~---------~~~~~ 240 (560)
||+|+...+--..-......+.|.||+|||+|.|- ..|++++|||++|||++|||+..++|.|.. ..+|+
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa-~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl 258 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA-RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQL 258 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhccc-ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHH
Confidence 99999875443332234567899999999999774 789999999999999999999999998742 45799
Q ss_pred HHHHHhcCCCCHHHHHHhhhHH-HHHHHHhhccCCCCC-----CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 008607 241 DIMTDLLGTPSPEAIARVRNEK-ARRYLSSMRKKKPIP-----FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314 (560)
Q Consensus 241 ~~i~~~~g~p~~~~~~~~~~~~-~~~~l~~~~~~~~~~-----~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp 314 (560)
+.|.+++|+|..+.|..+.+-. ....++.++...... +.+....-++.+.+||.+||..||.+|+|++++|+|+
T Consensus 259 ~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~ 338 (438)
T KOG0666|consen 259 DRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHP 338 (438)
T ss_pred HHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhccc
Confidence 9999999999999988776532 224555554332211 1223344467799999999999999999999999999
Q ss_pred ccccc
Q 008607 315 YFKGL 319 (560)
Q Consensus 315 ~f~~~ 319 (560)
||..-
T Consensus 339 yF~~d 343 (438)
T KOG0666|consen 339 YFTED 343 (438)
T ss_pred ccccC
Confidence 99853
No 20
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.8e-49 Score=413.19 Aligned_cols=335 Identities=51% Similarity=0.895 Sum_probs=281.0
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
|..+++|++.+.||+|+||.||+|.+..+|+.||||++... .......++.+|+.+|+.++|+||+++++++.......
T Consensus 1 ~~~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 79 (336)
T cd07849 1 FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF-EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFES 79 (336)
T ss_pred CccccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc-ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccc
Confidence 45678999999999999999999999999999999998632 23334567889999999999999999999886655555
Q ss_pred CccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
...+|+|+||++++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~ 158 (336)
T cd07849 80 FNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADP 158 (336)
T ss_pred cceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccc
Confidence 567899999999999988854 4799999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
...........+||+.|+|||.+.+. ..++.++|||||||++|+|++|++||.+.+...++..+.+.++.|..+.+..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (336)
T cd07849 159 EHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCI 237 (336)
T ss_pred cccccCCcCCcCcCCCccChHHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence 33222233456889999999987542 46788999999999999999999999999999999999999999999888877
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhH
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEF 338 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~ 338 (560)
.....+.++.........++....+..++.+.+||.+||+.||++|||+.|+|+||||+.+.....++..+....++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~ 317 (336)
T cd07849 238 ISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDPSDEPVAEEPFPFDFEL 317 (336)
T ss_pred hchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCCCCcccCCCCCChhhcc
Confidence 77777777776665555555566677899999999999999999999999999999999988766666554444445443
Q ss_pred HhhcCCHHHHHHHHHHHHH
Q 008607 339 ERRRITKEDVRELIYREIL 357 (560)
Q Consensus 339 e~~~~~~e~~~e~i~~ei~ 357 (560)
. ..+.++..+++|+.+|+
T Consensus 318 ~-~~~~~~~~~~~~~~~~~ 335 (336)
T cd07849 318 F-DDLPKEKLKELIFEEIM 335 (336)
T ss_pred c-cccCHHHHHHHHHHHhc
Confidence 3 45568889999988875
No 21
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.2e-49 Score=417.36 Aligned_cols=330 Identities=42% Similarity=0.707 Sum_probs=260.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|++.+.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++|+||+++++++..........+|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 37889999999999999999999999999999976555555667889999999999999999999998765544445789
Q ss_pred EEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 104 VVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
+||||+.++|.+++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-- 158 (372)
T cd07853 81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-- 158 (372)
T ss_pred EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCcc--
Confidence 999999999999998888899999999999999999999999999999999999999999999999999986533221
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
......++|++|+|||++.+. ..++.++|||||||++|||++|+.||.+.+..+++..|.+.+|.|..+.+..... ..
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~-~~ 236 (372)
T cd07853 159 KHMTQEVVTQYYRAPEILMGS-RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACE-GA 236 (372)
T ss_pred ccCCCCCcCCCcCCHHHHcCC-CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhH-HH
Confidence 123456789999999998652 4578999999999999999999999999999999999999999999877655432 23
Q ss_pred HHHHHhhccCCCC--CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCC----------------C
Q 008607 264 RRYLSSMRKKKPI--PFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVER----------------E 325 (560)
Q Consensus 264 ~~~l~~~~~~~~~--~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~----------------~ 325 (560)
..++.......+. .........++.+.+||.+||++||.+|||++|+|+||||.+...... .
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGRLRYHTCMCKCCYTTSGGRVYT 316 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCcchhccccccccccccccccCC
Confidence 3333222221111 011233456889999999999999999999999999999987321100 0
Q ss_pred CCCCC--CCcchhhHHhhcCCHHHHHHHHHHHHH
Q 008607 326 PSAQP--VTKMEFEFERRRITKEDVRELIYREIL 357 (560)
Q Consensus 326 ~~~~~--~~~~~~~~e~~~~~~e~~~e~i~~ei~ 357 (560)
....+ ...++++++....+..++++.++.++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (372)
T cd07853 317 SDFEPSANPPFDDEYEKNLTSVRQVKEELHQFIL 350 (372)
T ss_pred cccCCCCCCCCCcccccccCCHHHHHHHHHHHHH
Confidence 00111 112344455555667777777766654
No 22
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.8e-49 Score=414.00 Aligned_cols=328 Identities=37% Similarity=0.673 Sum_probs=260.3
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-CC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-RE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~~ 98 (560)
...++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+.+++++..... ..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 34589999999999999999999999999999999998655555666788899999999999999999998865432 33
Q ss_pred CccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
...+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 101 ~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 178 (364)
T cd07875 101 FQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178 (364)
T ss_pred cCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence 456899999999999988864 488999999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.. .....++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.|.++....+
T Consensus 179 ~~----~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (364)
T cd07875 179 SF----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 252 (364)
T ss_pred CC----cccCCcccCCcCCHHHHhC--CCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhh
Confidence 21 2245689999999999977 57899999999999999999999999999999999999999999988776655
Q ss_pred hhHHHHHHHHhhccCCCCCCCCC------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCC
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQK------------FPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREP 326 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~------------~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~ 326 (560)
... ...++..........+... ....+..+++||.+||+.||.+|||++|+|+||||..+......+
T Consensus 253 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~~~~~ 331 (364)
T cd07875 253 QPT-VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPSEAE 331 (364)
T ss_pred hHH-HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCcccCC
Confidence 433 2333333222111111111 112356799999999999999999999999999998766554443
Q ss_pred CCCCCCcchhhHHhhcCCHHHHHHHHHHHHH
Q 008607 327 SAQPVTKMEFEFERRRITKEDVRELIYREIL 357 (560)
Q Consensus 327 ~~~~~~~~~~~~e~~~~~~e~~~e~i~~ei~ 357 (560)
...+.. -+.....+..+.+++++.++.+++
T Consensus 332 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 361 (364)
T cd07875 332 APPPKI-PDKQLDEREHTIEEWKELIYKEVM 361 (364)
T ss_pred CCCCCC-CCccchhhhccHHHHHHHHHHHHH
Confidence 322211 122233456677778888777764
No 23
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-50 Score=407.01 Aligned_cols=258 Identities=32% Similarity=0.493 Sum_probs=221.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
-..|.+.+.||+|+||+||+|+++.++..||||.|.+........+-+..|+++|+.++|||||.+++++... +.
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~-----~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDD-----DF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecC-----Ce
Confidence 3569999999999999999999999999999999987554666677788999999999999999999998554 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC------CcEEEecccccc
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD------CKLKICDFGLAR 174 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~------~~lKL~DFGla~ 174 (560)
+|+|||||. |||.++|++.+.++|..++.|+.||+.||++||+++||||||||+||||+.. -.+||+|||+|+
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999 6999999999999999999999999999999999999999999999999875 459999999999
Q ss_pred cccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
....+. ...+.||++.|||||++.. ..|+.|+|+||+|+|+|+|++|++||...+..+.+..+.+...
T Consensus 164 ~L~~~~----~a~tlcGSplYMAPEV~~~--~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~------ 231 (429)
T KOG0595|consen 164 FLQPGS----MAETLCGSPLYMAPEVIMS--QQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE------ 231 (429)
T ss_pred hCCchh----HHHHhhCCccccCHHHHHh--ccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc------
Confidence 876443 3467899999999999976 6899999999999999999999999998887666543332110
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
. ++ ......++...+|+..+|+.++..|.+.++-+.|+++..
T Consensus 232 ------------------~--~~--~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 232 ------------------I--VP--VLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ------------------c--cC--chhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 0 00 001133555678999999999999999999999999874
No 24
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=7.7e-49 Score=412.33 Aligned_cols=295 Identities=40% Similarity=0.722 Sum_probs=243.1
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-CC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-RE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~~ 98 (560)
...++|++.+.||+|+||.||+|.+..+|..||||++............+.+|+.+++.++||||+++++++..... ..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 34689999999999999999999999999999999997655555566788899999999999999999999865432 33
Q ss_pred CccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
...+|+||||++++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 175 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT 175 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcccccc
Confidence 456899999999999888754 489999999999999999999999999999999999999999999999999975432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+++..+.+.++.|..+.....
T Consensus 176 ~~----~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (359)
T cd07876 176 NF----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRL 249 (359)
T ss_pred Cc----cCCCCcccCCCCCchhccC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHH
Confidence 21 2245688999999999976 57899999999999999999999999999999999999999999988776654
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCC------------CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccC
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFP------------NANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVE 323 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~------------~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~ 323 (560)
.. ....++..........+...++ ..++.+.+||.+||+.||++|||++|+|+||||..+....
T Consensus 250 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~~ 325 (359)
T cd07876 250 QP-TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPA 325 (359)
T ss_pred HH-HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhcCcc
Confidence 32 2233333322222222222221 2367899999999999999999999999999998765443
No 25
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-51 Score=395.65 Aligned_cols=259 Identities=30% Similarity=0.449 Sum_probs=219.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
...-..|+|+++||+|+||.||++.+..+|+.||+|+|+-...+....+.+..|+.+|++|+|||||++++.-+. ++
T Consensus 15 ~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~---~~ 91 (375)
T KOG0591|consen 15 QKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFI---ED 91 (375)
T ss_pred cccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhh---cc
Confidence 444567999999999999999999999999999999998655566677789999999999999999999884332 22
Q ss_pred CccEEEEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh--CC--eeeccCCCCCeeeCCCCcEEEec
Q 008607 99 FKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHT--AN--VFHRDLKPKNILANADCKLKICD 169 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs--~g--IiHrDLKP~NILl~~~~~lKL~D 169 (560)
..-++||||||+ |||.+.|+. ...++|..+|+++.||++||..||+ .+ |+||||||.||+++.+|.+||+|
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeecc
Confidence 234899999998 799999964 3469999999999999999999999 45 99999999999999999999999
Q ss_pred ccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCC
Q 008607 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249 (560)
Q Consensus 170 FGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~ 249 (560)
|||++...+.. .+..+++|||+||+||++.+ .+|+.++||||+||++|||+..++||.|.+......+|...-
T Consensus 172 fGL~r~l~s~~---tfA~S~VGTPyYMSPE~i~~--~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd-- 244 (375)
T KOG0591|consen 172 FGLGRFLSSKT---TFAHSLVGTPYYMSPERIHE--SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGD-- 244 (375)
T ss_pred chhHhHhcchh---HHHHhhcCCCcccCHHHHhc--CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCC--
Confidence 99999875443 34578999999999999988 799999999999999999999999999998877777776421
Q ss_pred CCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 250 PSPEAIARVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 250 p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
++..+ ..+|..+..||..|+..||..||+. +|++..+.
T Consensus 245 ----------------------------~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~ 283 (375)
T KOG0591|consen 245 ----------------------------YPPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQ 283 (375)
T ss_pred ----------------------------CCCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHH
Confidence 11112 2457788999999999999999996 56665543
No 26
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-50 Score=420.34 Aligned_cols=258 Identities=32% Similarity=0.578 Sum_probs=229.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|.+.+.||+|+||.||+|+.+.|.+.||||.+.+......+...+.+|++|++.|+|||||.+++.| +...++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf-----Et~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF-----ETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh-----cccceE
Confidence 579999999999999999999999999999999998777788888999999999999999999999988 455689
Q ss_pred EEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 103 YVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
|+|+||+.|+|+.++..++.++|+.++.|+++++.||.|||+++|+|||+||.|||++..|.+|+||||+|+.....
T Consensus 77 ~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~--- 153 (808)
T KOG0597|consen 77 WVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN--- 153 (808)
T ss_pred EEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999986442
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
....+..-|||.|||||+..+ ..|+..+|+||||||+|||..|++||......+....|..
T Consensus 154 t~vltsikGtPlYmAPElv~e--~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~----------------- 214 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEE--QPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILK----------------- 214 (808)
T ss_pred ceeeeeccCcccccCHHHHcC--CCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-----------------
Confidence 234567789999999999987 7999999999999999999999999987665554444322
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.+..+. ..++..+++||+.+|.+||.+|+|..++|.|||+++--.
T Consensus 215 -----------d~v~~p---~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 215 -----------DPVKPP---STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred -----------CCCCCc---ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 122221 378899999999999999999999999999999986433
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-49 Score=416.76 Aligned_cols=257 Identities=33% Similarity=0.535 Sum_probs=220.2
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC---hhHHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~---~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~ 96 (560)
...+|++.+.||+|+||.|+.|.+..+|..||+|++.+.... ......+.||+.+++.++ ||||+++++++.+..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~- 93 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT- 93 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC-
Confidence 346899999999999999999999999999999977653111 133456779999999999 999999999996654
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccccc
Q 008607 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLAR 174 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGla~ 174 (560)
++|||||||.| +|+++|...+++.|..++.+|+||+.||+|||+.||+||||||+|||++.+ +++||+|||++.
T Consensus 94 ----~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 ----KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred ----eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 49999999995 999999998899999999999999999999999999999999999999999 999999999998
Q ss_pred cccCCCCCcccccccccCcccccccccccccCC-CC-CccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 008607 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSK-YT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~-y~-~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~ 252 (560)
... .......+.|||+.|+|||++.+. . |+ .++||||+||+||.|++|+.||...+....+..|..
T Consensus 170 ~~~---~~~~~l~t~cGsp~Y~aPEvl~~~--~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~------- 237 (370)
T KOG0583|consen 170 ISP---GEDGLLKTFCGSPAYAAPEVLSGK--GTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRK------- 237 (370)
T ss_pred ccC---CCCCcccCCCCCcccCCHHHhCCC--CCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhc-------
Confidence 763 222345788999999999999873 4 65 789999999999999999999998776665554332
Q ss_pred HHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCC-CHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA-NPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
....+ ...+ ++.+.+||++||..||.+|+|+.+++.||||+.
T Consensus 238 ---------------------~~~~~---p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 238 ---------------------GEFKI---PSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred ---------------------CCccC---CCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 11111 1233 999999999999999999999999999999985
No 28
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.1e-49 Score=401.53 Aligned_cols=286 Identities=35% Similarity=0.649 Sum_probs=236.4
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
|+.-++|++.++||.|+||.||+|++..++..||+|++.... .......+.+|+.+|+.++||||+++++++...
T Consensus 1 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 75 (288)
T cd07871 1 FGKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEH-EEGAPCTAIREVSLLKNLKHANIVTLHDIIHTE---- 75 (288)
T ss_pred CCccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccc-cCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCC----
Confidence 466778999999999999999999999999999999986432 222345677999999999999999999988543
Q ss_pred CccEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..+|+||||++++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 76 -~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~ 154 (288)
T cd07871 76 -RCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKS 154 (288)
T ss_pred -CeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeecc
Confidence 4689999999999999987654 58999999999999999999999999999999999999999999999999997643
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... ......+++.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|..+.+..
T Consensus 155 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T cd07871 155 VPTK---TYSNEVVTLWYRPPDVLLGS-TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPG 230 (288)
T ss_pred CCCc---cccCceecccccChHHhcCC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhc
Confidence 2221 12446789999999998652 4688999999999999999999999999999999999999999998887765
Q ss_pred hhhHH-HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 258 VRNEK-ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 258 ~~~~~-~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
+.... ...++ +......+.....+..++.+++||.+||++||.+|||++|+|+||||
T Consensus 231 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 231 ITSNEEFRSYL--FPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cccchhhhccc--cCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 44321 11111 11111222233345778999999999999999999999999999998
No 29
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-50 Score=423.61 Aligned_cols=262 Identities=31% Similarity=0.512 Sum_probs=229.1
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
...-|++.+.||.|+.|.|-+|.|..||+.+|||+|.+... ..+....|.+||-||+.|.|||++.++++| ++.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-----e~~ 84 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-----ENK 84 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-----ccC
Confidence 34569999999999999999999999999999999987532 334457799999999999999999999999 455
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.++|+|.||++ |.|++++...+++++.++.+||+||+.||.|||..+|+||||||+|+|+|.++.+||+|||.|.....
T Consensus 85 ~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 85 QHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred ceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 68999999998 69999999999999999999999999999999999999999999999999999999999999987544
Q ss_pred CCCCcccccccccCcccccccccccccCCC-CCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y-~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
+. .+.+.||++.|+|||++.| ..| +.++||||+|||||.||+|+.||.+.|....+.++...
T Consensus 165 gk----lLeTSCGSPHYA~PEIV~G--~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G----------- 227 (786)
T KOG0588|consen 165 GK----LLETSCGSPHYAAPEIVSG--RPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRG----------- 227 (786)
T ss_pred Cc----cccccCCCcccCCchhhcC--CCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcC-----------
Confidence 43 4577999999999999987 455 57899999999999999999999988866655554431
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCC
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVER 324 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~ 324 (560)
..+...++++++++||.+||.+||.+|+|.+||++|||+.+......
T Consensus 228 --------------------~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 228 --------------------VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPS 274 (786)
T ss_pred --------------------cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCCh
Confidence 12233678999999999999999999999999999999998765443
No 30
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-50 Score=387.44 Aligned_cols=254 Identities=25% Similarity=0.471 Sum_probs=224.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++++.||.|+||.|.+++++.+|..+|+|++++. .-.....+...+|..+|+.+.||+++.+.+.+. +..+
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~-----d~~~ 118 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK-----DNSN 118 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-----cCCe
Confidence 5799999999999999999999999999999999742 234455677889999999999999999999884 4457
Q ss_pred EEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||||++| .|+.++++.++|++.++++++.||+.||+|||+++|++|||||+|||+|.+|.+||+|||+|+.....+
T Consensus 119 lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT 198 (355)
T KOG0616|consen 119 LYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRT 198 (355)
T ss_pred EEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcE
Confidence 9999999984 999999999999999999999999999999999999999999999999999999999999998764432
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.+.||||.|+|||++.+ .+|+.++|.|||||++|||+.|.+||.+.+....+++|...-
T Consensus 199 ------~TlCGTPeYLAPEii~s--k~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~------------- 257 (355)
T KOG0616|consen 199 ------WTLCGTPEYLAPEIIQS--KGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGK------------- 257 (355)
T ss_pred ------EEecCCccccChHHhhc--CCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCc-------------
Confidence 56899999999999987 789999999999999999999999999999888777776420
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC-----CCHHHHhcCccccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR-----PTAEEALADPYFKGLA 320 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R-----pta~elL~hp~f~~~~ 320 (560)
....+-+++.++|||+++|+.|-.+| ...++|..||||+++.
T Consensus 258 ------------------v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 258 ------------------VKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred ------------------ccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 01123568999999999999999999 4688999999999753
No 31
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-50 Score=364.86 Aligned_cols=278 Identities=41% Similarity=0.696 Sum_probs=239.9
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|.-.++||+|.||+||+|++..|++.||+|.++....+..-....+|||-+|+.|+|.|||+++++... .+.+.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhs-----dkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-----DKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhcc-----CceeE
Confidence 4667789999999999999999999999999998655555556778999999999999999999998733 34689
Q ss_pred EEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+|||||..+|..++.. ++.+..+.++.++.|+++||.|+|+.+++||||||+|+||+.+|.+||+|||+|+... .+.
T Consensus 78 lvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafg--ipv 155 (292)
T KOG0662|consen 78 LVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFG--IPV 155 (292)
T ss_pred EeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcC--Cce
Confidence 9999999999999986 6689999999999999999999999999999999999999999999999999998642 222
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
..++..+.|.||++|.++.+- .-|+.++|+||.|||++|+.. |+++|+|.+..+|+..|..++|+|+.+.|..+.
T Consensus 156 -rcysaevvtlwyrppdvlfga-kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t-- 231 (292)
T KOG0662|consen 156 -RCYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMT-- 231 (292)
T ss_pred -EeeeceeeeeeccCcceeeee-ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccc--
Confidence 123556889999999999773 679999999999999999986 889999999999999999999999988775442
Q ss_pred HHHHHHHhhccCCCC-------CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 262 KARRYLSSMRKKKPI-------PFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~-------~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.+....+. .|++..|+++...+||++++|.-+|.+|++++++|+||||...
T Consensus 232 -------~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 232 -------KLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred -------cCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccccc
Confidence 22222222 2345567778889999999999999999999999999999864
No 32
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-51 Score=387.75 Aligned_cols=259 Identities=31% Similarity=0.498 Sum_probs=224.7
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|++.+.||+|.|++|+++.+..||..+|+|.|+...-...+.+.+.+|+.|-+.|+||||+++++.+. ....
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~-----~~~~ 84 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF 84 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhc-----ccce
Confidence 45799999999999999999999999999999999743334446788999999999999999999998773 3346
Q ss_pred EEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC---CcEEEeccccccccc
Q 008607 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFGLARVAF 177 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~---~~lKL~DFGla~~~~ 177 (560)
.|||||+|+| +|..-|.++.-++|..+.++++|||+||.|+|.+||+|||+||+|+|+-.. .-+||||||+|....
T Consensus 85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 8999999996 898888777779999999999999999999999999999999999998654 359999999998765
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
....|...+|||.|+|||++.. ..|+..+|||+.|||||-||.|.+||.+.+....++.|....
T Consensus 165 ----~g~~~~G~~GtP~fmaPEvvrk--dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~---------- 228 (355)
T KOG0033|consen 165 ----DGEAWHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGA---------- 228 (355)
T ss_pred ----CccccccccCCCcccCHHHhhc--CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccc----------
Confidence 2345678999999999999987 689999999999999999999999999988777776665311
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
..--...|+.+++++++||++||..||.+|+|+.|+|+|||+.+
T Consensus 229 -----------------yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 229 -----------------YDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred -----------------cCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 11112367899999999999999999999999999999999975
No 33
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-51 Score=389.87 Aligned_cols=288 Identities=43% Similarity=0.760 Sum_probs=248.1
Q ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
-.+-||.|+||+||.+.|.+.|+.||+|++.+.+.+....+++.+|+++|..++|.|++..+++...+...-+..+|+|+
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 34679999999999999999999999999998888888889999999999999999999999998877666677899999
Q ss_pred ecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 107 ELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 107 E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
|+|..||+.+|..-..++.++++-|++||++||+|||+.+|+||||||.|+|+|.||.+||||||||+....+.. ..+
T Consensus 137 ELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~--~hM 214 (449)
T KOG0664|consen 137 ELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR--LNM 214 (449)
T ss_pred HHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhh--hhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999998654433 335
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
+..+.|-+|+|||++.|. ..|+.++||||+|||+.|||-.+.+|...+...|+++|++++|+|+.|.+.--.. .++..
T Consensus 215 TqEVVTQYYRAPEiLMGa-RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACE-GAk~H 292 (449)
T KOG0664|consen 215 THEVVTQYYRAPELLMGA-RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACE-GAKNH 292 (449)
T ss_pred HHHHHHHHhccHHHhhcc-hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhh-hhHHH
Confidence 677899999999999764 6899999999999999999999999999999999999999999999988754432 23332
Q ss_pred HHhhccCCCCCCCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 267 LSSMRKKKPIPFSQKF-----PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~-----~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
+-.-..+. ..+...+ .....++++++.+||.+||.+|++.++++.|+|+.+.
T Consensus 293 ~LR~~~k~-Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 293 VLRAGLRA-PDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred hhccCCCC-CCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence 22111111 1122211 1334678999999999999999999999999998754
No 34
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.7e-48 Score=405.56 Aligned_cols=293 Identities=39% Similarity=0.710 Sum_probs=241.7
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-CCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-REF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~~~ 99 (560)
..++|++.+.||+|+||.||+|.+..+++.||||++...........++.+|+.+++.++||||+++++++..... ...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999999999999999998655555566788899999999999999999999865432 334
Q ss_pred ccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..+|+||||++++|.+.+.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred ceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 56899999999999888864 4899999999999999999999999999999999999999999999999999764322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.+.++.|.++....+.
T Consensus 173 ~----~~~~~~~t~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (355)
T cd07874 173 F----MMTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246 (355)
T ss_pred c----ccCCccccCCccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhc
Confidence 1 2245689999999999976 578999999999999999999999999999999999999999999888776654
Q ss_pred hHHHHHHHHhhccCCCCCCC------------CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFS------------QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~------------~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
.. ...++..........+. ......+..+.+||.+||+.||.+|||++|+|+||||..+...
T Consensus 247 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~~ 320 (355)
T cd07874 247 PT-VRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWYDP 320 (355)
T ss_pred HH-HHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcccCh
Confidence 32 33333332221111111 1112345678999999999999999999999999999876543
No 35
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.8e-48 Score=403.96 Aligned_cols=330 Identities=52% Similarity=0.947 Sum_probs=281.8
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..+.+|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+|+.++|+||+++++++.... ...
T Consensus 2 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~ 80 (334)
T cd07855 2 DVGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADF 80 (334)
T ss_pred chhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCC
Confidence 4568899999999999999999999999999999999765444455677889999999999999999999875443 344
Q ss_pred ccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..+|+||||+.++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 160 (334)
T cd07855 81 KDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS 160 (334)
T ss_pred ceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence 57899999999999999988888999999999999999999999999999999999999999999999999999765332
Q ss_pred CCC-cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~-~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
... .......+++.+|+|||.+.+. ..++.++|||||||++|+|++|+.||.+.+...++..+...+|.|..+.+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~ 239 (334)
T cd07855 161 PTEHKYFMTEYVATRWYRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRI 239 (334)
T ss_pred CcCCCcccccccccccccChHHhcCC-cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhh
Confidence 221 1122346789999999998652 45889999999999999999999999999999999999999999999998888
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhH
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEF 338 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~ 338 (560)
.......++.........++...++..+..+.+||++||+.||.+|||++++|.||||.++.....++.+. ...++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~ 317 (334)
T cd07855 240 GSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPDDEPTCP--PPFDFDF 317 (334)
T ss_pred chhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCcccccCC--CCCCCCh
Confidence 88777778877777777777777788899999999999999999999999999999999888777665543 3456677
Q ss_pred HhhcCCHHHHHHHHH
Q 008607 339 ERRRITKEDVRELIY 353 (560)
Q Consensus 339 e~~~~~~e~~~e~i~ 353 (560)
+....+.|.+.+.|.
T Consensus 318 ~~~~~~~~~~~~~~~ 332 (334)
T cd07855 318 EAIELSREQLKEAIV 332 (334)
T ss_pred hhhhcChhhHHHHhh
Confidence 777777777666553
No 36
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=9.4e-48 Score=401.74 Aligned_cols=332 Identities=46% Similarity=0.858 Sum_probs=285.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~ 97 (560)
+..+++|++.+.||+|+||.||+|++..++..||||++............+.+|+.+++.+.|+||+.+++++..... .
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07851 11 WEVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLE 90 (343)
T ss_pred ecccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccc
Confidence 456789999999999999999999999999999999987544444455678899999999999999999998755432 3
Q ss_pred CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 98 ~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
....+|+|+||++++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++....
T Consensus 91 ~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~ 169 (343)
T cd07851 91 DFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD 169 (343)
T ss_pred ccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence 3456899999999999998875 469999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.. ...+.++..|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+....+..+.+.++.+.++.+.+
T Consensus 170 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 242 (343)
T cd07851 170 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQK 242 (343)
T ss_pred cc------ccCCcccccccCHHHHhCC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhh
Confidence 22 2446789999999998542 3678899999999999999999999999999889999999999999988888
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhh
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFE 337 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~ 337 (560)
+..+....++..+.......+...+...++.+.+||.+||..||.+|||+.|||+||||..+...+.++.. .....+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~~~---~~~~~~ 319 (343)
T cd07851 243 ISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEPVA---PPYDQS 319 (343)
T ss_pred ccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCcccccc---cccCcc
Confidence 88888888887777666666666667789999999999999999999999999999999988776655442 223466
Q ss_pred HHhhcCCHHHHHHHHHHHHHhhCh
Q 008607 338 FERRRITKEDVRELIYREILEYHP 361 (560)
Q Consensus 338 ~e~~~~~~e~~~e~i~~ei~~~~p 361 (560)
++...+..++++++++.++.+|.|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~ 343 (343)
T cd07851 320 FESRDLTVDEWKELVYKEIMNFKP 343 (343)
T ss_pred hhhhhcCHHHHHHHhHHHHHhccC
Confidence 788899999999999999998876
No 37
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.9e-48 Score=396.98 Aligned_cols=291 Identities=34% Similarity=0.593 Sum_probs=228.0
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
||..++|++.+.||+|+||.||+|.+..+++.||||++..... ......+.+|+.+++.++||||+++++++...
T Consensus 1 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 75 (303)
T cd07869 1 FGKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGLKHANIVLLHDIIHTK---- 75 (303)
T ss_pred CCccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc-cccchhHHHHHHHHhhCCCCCcCeEEEEEecC----
Confidence 6788999999999999999999999999999999999874322 22334577899999999999999999998543
Q ss_pred CccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..+|+||||+.++|.+++..+ +.++++.++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 76 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 154 (303)
T cd07869 76 -ETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKS 154 (303)
T ss_pred -CeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceecc
Confidence 468999999999999888764 469999999999999999999999999999999999999999999999999987532
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~-~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... ......++|+.|+|||++.+. ..++.++|||||||++|+|++|..||.+. +..+++..+...++.|....+.
T Consensus 155 ~~~---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (303)
T cd07869 155 VPS---HTYSNEVVTLWYRPPDVLLGS-TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230 (303)
T ss_pred CCC---ccCCCCcccCCCCChHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence 211 122456789999999998652 46788999999999999999999999875 4456777777778877765443
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKF--PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
......... -..+....+..+...+ ...++.+.+||.+||+.||.+|||++|+|+||||+.+.
T Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 231 GVHSLPHFK-PERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred chhhccccc-cccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence 322100000 0000000011111111 12467899999999999999999999999999998753
No 38
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.4e-48 Score=405.48 Aligned_cols=266 Identities=27% Similarity=0.449 Sum_probs=224.0
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
-.+.|+++++||+|+||.||+|+.+.||+.+|+|++++.. ........++.|-.+|....++.||+|+..|.+.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~----- 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDK----- 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCC-----
Confidence 3467999999999999999999999999999999998632 2334557788999999999999999999999544
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.++||||||++ ||+..+|.+.+.|+++++++++.+++.|+.-||+.|+|||||||+|+|||..|++||+||||+.....
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 47999999998 59999999999999999999999999999999999999999999999999999999999999964311
Q ss_pred C-------------------CCCc-c------------------------cccccccCcccccccccccccCCCCCccch
Q 008607 179 D-------------------TPTA-I------------------------FWTDYVATRWYRAPELCGSFFSKYTPAIDI 214 (560)
Q Consensus 179 ~-------------------~~~~-~------------------------~~~~~~gT~~Y~APEll~~~~~~y~~~~DI 214 (560)
. .+.. . .....+|||.|+|||++.+ .+|+..+|.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~--kgY~~~cDw 371 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG--KGYGKECDW 371 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc--CCCCccccH
Confidence 0 0000 0 0124699999999999988 689999999
Q ss_pred hhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHH
Q 008607 215 WSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLE 294 (560)
Q Consensus 215 WSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~ 294 (560)
||||||+||||.|.+||.+.+..+.+.+|...-- .+ .+. .-..+++++.|||.
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~--------------------~l------~fP-~~~~~s~eA~DLI~ 424 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE--------------------TL------KFP-EEVDLSDEAKDLIT 424 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh--------------------hc------cCC-CcCcccHHHHHHHH
Confidence 9999999999999999999999888877764210 00 011 11245689999999
Q ss_pred HhcccCCCCCC---CHHHHhcCcccccccc
Q 008607 295 RMLAFEPKDRP---TAEEALADPYFKGLAK 321 (560)
Q Consensus 295 ~mL~~DP~~Rp---ta~elL~hp~f~~~~~ 321 (560)
+||. ||.+|. .++||-+||||+++..
T Consensus 425 rll~-d~~~RLG~~G~~EIK~HPfF~~v~W 453 (550)
T KOG0605|consen 425 RLLC-DPENRLGSKGAEEIKKHPFFKGVDW 453 (550)
T ss_pred HHhc-CHHHhcCcccHHHHhcCCccccCCc
Confidence 9999 999997 4999999999998753
No 39
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.3e-48 Score=391.99 Aligned_cols=284 Identities=35% Similarity=0.609 Sum_probs=230.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECC-CCcEEEEEEecCcccChhHHHHHHHHHHHHHhc---CCCCccccceeecCCCcCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFEHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~-tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~i~~~~~~~~ 98 (560)
++|++++.||+|+||.||+|.+.. +|..||+|++............+.+|+.+++.+ .||||+++++++.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 479999999999999999999865 578899999875443333445566788887766 5999999999986443334
Q ss_pred CccEEEEEecCCccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
...+++||||+.++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T cd07862 81 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 160 (290)
T ss_pred CCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEec
Confidence 4578999999999999999764 35899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.... ......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..|.+..+.|.++.+.
T Consensus 161 ~~~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~ 234 (290)
T cd07862 161 SFQM----ALTSVVVTLWYRAPEVLLQ--SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234 (290)
T ss_pred cCCc----ccccccccccccChHHHhC--CCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence 3321 2245679999999999976 578899999999999999999999999999999999999988888765543
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...... . ..+......++....+.+++.+.+||.+||+.||++|||+.|+|+||||
T Consensus 235 ~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 235 RDVALP-R---QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhccc-c---hhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 221100 0 0111222333344456788999999999999999999999999999998
No 40
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=7.3e-48 Score=399.29 Aligned_cols=329 Identities=58% Similarity=0.984 Sum_probs=284.5
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||.|+||.||+|.+..+++.||||++............+.+|+.+++.++|+||+++++++..........+|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 69999999999999999999999999999999986554455567889999999999999999999998765434556789
Q ss_pred EEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 104 VVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
+||||++++|.+++.....+++..++.++.||+.||+|||+.||+||||||+|||++.++.++|+|||++..........
T Consensus 81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~ 160 (330)
T cd07834 81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEK 160 (330)
T ss_pred EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccccccc
Confidence 99999999999999888889999999999999999999999999999999999999999999999999998765433211
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
.......++.+|+|||.+.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|..+.+........
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 239 (330)
T cd07834 161 GFLTEYVVTRWYRAPELLLSS-SRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA 239 (330)
T ss_pred ccccccccccCcCCceeeecc-cCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence 223456789999999999762 3788999999999999999999999999999999999999999999888877777777
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhHHhhcC
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRI 343 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~e~~~~ 343 (560)
..++..........+...++.+++.+.+||++||++||.+|||++++|.||||+++.....+........+. .++...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (330)
T cd07834 240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDEPVAKPPFDFD-FFDDDEL 318 (330)
T ss_pred hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccCCCCCCccccc-ccchhhc
Confidence 888887777777777778888999999999999999999999999999999999988776665554443321 3567788
Q ss_pred CHHHHHHHHHH
Q 008607 344 TKEDVRELIYR 354 (560)
Q Consensus 344 ~~e~~~e~i~~ 354 (560)
++++.+++|+.
T Consensus 319 ~~~~~~~~~~~ 329 (330)
T cd07834 319 TEEELKELIYE 329 (330)
T ss_pred CHHHHhHHhhc
Confidence 99999998875
No 41
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.8e-47 Score=411.54 Aligned_cols=286 Identities=36% Similarity=0.619 Sum_probs=229.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc---CC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR---RE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~---~~ 98 (560)
..+|++.++||+|+||.||+|.+..+++.||||++... .....+|+.+|+.++|+||+++++++..... ..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~------~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~ 138 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD------PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEK 138 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC------cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCC
Confidence 46899999999999999999999999999999988532 1234579999999999999999998755432 12
Q ss_pred CccEEEEEecCCccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-cEEEeccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLA 173 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-~lKL~DFGla 173 (560)
...+++||||++++|.+++.. ...+++..++.++.||+.||+|||+.||+||||||+|||++.++ .+||+|||+|
T Consensus 139 ~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla 218 (440)
T PTZ00036 139 NIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA 218 (440)
T ss_pred ceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence 235789999999998877753 45799999999999999999999999999999999999999765 7999999999
Q ss_pred ccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 174 ~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
+....... ...++||+.|+|||++.+. ..|+.++|||||||++|||++|.+||.+.+..+++..+...+|+|..+
T Consensus 219 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~ 293 (440)
T PTZ00036 219 KNLLAGQR----SVSYICSRFYRAPELMLGA-TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTED 293 (440)
T ss_pred hhccCCCC----cccCCCCcCccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 86543322 2356889999999998652 468999999999999999999999999999999999999999999887
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFP-NANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.+.......... .+....+..+...++ ..++++++||.+||++||.+|||+.|+|+||||..+..
T Consensus 294 ~~~~~~~~~~~~---~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 294 QLKEMNPNYADI---KFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred HHHHhchhhhcc---cCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence 665432211000 000111111222222 46789999999999999999999999999999988754
No 42
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.1e-47 Score=387.48 Aligned_cols=285 Identities=34% Similarity=0.637 Sum_probs=225.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++|+||+++++++.. ...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRR-----RGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEec-----CCEE
Confidence 47999999999999999999999999999999997543444455678899999999999999999998843 3468
Q ss_pred EEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++++.+.+.. ...++++.++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99999999876665544 45799999999999999999999999999999999999999999999999999986533221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+..+.+.+......
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07848 156 A--NYTEYVATRWYRSPELLLG--APYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSN 231 (287)
T ss_pred c--cccccccccccCCcHHHcC--CCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhcc
Confidence 1 1234679999999999976 56889999999999999999999999999888888778777776655443322111
Q ss_pred HHHHHHHhhccCCCCC-CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIP-FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~-~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
........-....+.. .......++..+.+||++||++||++|||++|+|+||||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 232 PRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred chhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0000000000000000 011123468889999999999999999999999999998
No 43
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.5e-47 Score=390.26 Aligned_cols=291 Identities=36% Similarity=0.660 Sum_probs=240.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
|+..++|++.+.||+|+||.||+|++..+++.||+|++..... ......+.+|+.+++.++|+||+++++++...
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 76 (309)
T cd07872 2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTD---- 76 (309)
T ss_pred CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc-CCcchhHHHHHHHHHhCCCCCcceEEEEEeeC----
Confidence 5777899999999999999999999999999999999874322 22334567899999999999999999988543
Q ss_pred CccEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
...|+||||++++|.+++...+ .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 77 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 155 (309)
T cd07872 77 -KSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (309)
T ss_pred -CeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecC
Confidence 4689999999999999887654 58999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... ......+|+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|..+.+..
T Consensus 156 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (309)
T cd07872 156 VPTK---TYSNEVVTLWYRPPDVLLGS-SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG 231 (309)
T ss_pred CCcc---ccccccccccccCCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence 2221 12345789999999988652 4688899999999999999999999999999999999999999998887765
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
+......... ......+.++....+.+++.+.+||.+||..||.+|||++|+|+||||+.+.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 232 ISSNDEFKNY-NFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hcchhhhhhh-hcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 5433211111 1122223333445567899999999999999999999999999999999765
No 44
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=3.7e-47 Score=385.64 Aligned_cols=283 Identities=35% Similarity=0.592 Sum_probs=229.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc---CCCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+|++++.||+|+||+||+|+++.+|+.||+|.+............+.+|+.+++.+ .||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 59999999999999999999999999999999875433333334566788777665 699999999988654444445
Q ss_pred cEEEEEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 101 DIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.+++||||+.++|.+++.... .++++.++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd07863 81 KVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSC 160 (288)
T ss_pred eEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccC
Confidence 789999999999999887643 489999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.. ......+|..|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+....+.+....+...
T Consensus 161 ~~----~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07863 161 QM----ALTPVVVTLWYRAPEVLLQ--STYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRD 234 (288)
T ss_pred cc----cCCCccccccccCchHhhC--CCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccc
Confidence 22 1244678999999999976 57899999999999999999999999999888888888888887765443221
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.... -..+....+.......+.++..+.+||.+||+.||.+|||+.|+|.||||
T Consensus 235 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 235 VTLP----RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred cccc----ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 1000 00111122233344556788999999999999999999999999999998
No 45
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.6e-46 Score=393.85 Aligned_cols=327 Identities=39% Similarity=0.703 Sum_probs=258.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~ 97 (560)
|...++|++.+.||+|+||.||+|.+..+|+.||||++.+..........+.+|+.+++.++|+||+++++++..... .
T Consensus 12 ~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (353)
T cd07850 12 FTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLE 91 (353)
T ss_pred hhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcc
Confidence 345789999999999999999999999999999999987655555566778899999999999999999998865432 3
Q ss_pred CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 98 ~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
+....|+||||+.++|.+.+... +++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~ 169 (353)
T cd07850 92 EFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 169 (353)
T ss_pred ccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCC
Confidence 44568999999999999988754 9999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+...++..+...+|.|..+....
T Consensus 170 ~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (353)
T cd07850 170 TSFM----MTPYVVTRYYRAPEVILG--MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSR 243 (353)
T ss_pred CCCC----CCCCcccccccCHHHHhC--CCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 3221 234578899999999976 5789999999999999999999999999999999999999999998877665
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCC-------------CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCC
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQK-------------FPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVER 324 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~-------------~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~ 324 (560)
+.... ..++..........+... ....+..+.+||.+||+.||.+|||+.|+|.||||+.+.....
T Consensus 244 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~~~ 322 (353)
T cd07850 244 LQPTV-RNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDPSE 322 (353)
T ss_pred hhhhh-hHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCCcc
Confidence 44322 222222221111111111 1234667899999999999999999999999999998776433
Q ss_pred CCCCCCCCcchhhHHhhcCCHHHHHHHHHHH
Q 008607 325 EPSAQPVTKMEFEFERRRITKEDVRELIYRE 355 (560)
Q Consensus 325 ~~~~~~~~~~~~~~e~~~~~~e~~~e~i~~e 355 (560)
.....+ ...+...+.+..+.+++++.++.+
T Consensus 323 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd07850 323 VEAPPP-APYDHSIDEREHTVEEWKELIYKE 352 (353)
T ss_pred CCCCCC-CccccccccccccHHHHHHHHHhh
Confidence 322222 122333445566677777777654
No 46
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-49 Score=375.50 Aligned_cols=303 Identities=33% Similarity=0.522 Sum_probs=251.7
Q ss_pred cccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCC
Q 008607 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPP 94 (560)
Q Consensus 15 ~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~ 94 (560)
+++...+++.|+-+.+||+|.||.||+|+++++|+.||+|++....++.......++|+++|..|+|+|++.+++++.+.
T Consensus 9 ~~P~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk 88 (376)
T KOG0669|consen 9 YEPFCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTK 88 (376)
T ss_pred cCCceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhc
Confidence 34556778999999999999999999999999999999998765555556667788999999999999999999887543
Q ss_pred ---CcCCCccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecc
Q 008607 95 ---SRREFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (560)
Q Consensus 95 ---~~~~~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DF 170 (560)
.......+|+||++|+.||..++... .+|+..+++.++.+++.||.|+|.+.|+|||+|+.|+||+.+|.+||+||
T Consensus 89 ~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADF 168 (376)
T KOG0669|consen 89 ATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADF 168 (376)
T ss_pred cCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecc
Confidence 33344569999999999999999765 57999999999999999999999999999999999999999999999999
Q ss_pred cccccccCC-CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCC
Q 008607 171 GLARVAFND-TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGT 249 (560)
Q Consensus 171 Gla~~~~~~-~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~ 249 (560)
|+|+..... ......++..+.|.||++||++.+. ..|++++|||..|||++||++|.+.|.|++...++..|..++|.
T Consensus 169 Glar~fs~~~n~~kprytnrvvTLwYrppEllLG~-r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 169 GLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD-REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred ccccceecccccCCCCcccceeeeecCCHHHhhcc-cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 999764322 2222335778999999999999874 68999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhhhHHHHHHHHhh--ccCCCCCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 250 PSPEAIARVRNEKARRYLSSM--RKKKPIPFSQKFP--NANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 250 p~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~--~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
-..+.|..+.+-....-++.- .+........... .-++.+.|||++||..||.+|++++++|.|.||..
T Consensus 248 ~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~k 320 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWK 320 (376)
T ss_pred CCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence 999988877765544444211 1111111111111 12678999999999999999999999999999974
No 47
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.3e-47 Score=411.96 Aligned_cols=285 Identities=26% Similarity=0.437 Sum_probs=227.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCC------CccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHP------DIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hp------nIv~l~~i~~~~~ 95 (560)
.++|+++++||+|+||+||+|.+..+++.||||+++.. ......+..|+.+++.++|. +++.+++++...
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~- 203 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV---PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNE- 203 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc---hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcC-
Confidence 47899999999999999999999999999999999642 12234456788888877654 477777777432
Q ss_pred cCCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCC-----------
Q 008607 96 RREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADC----------- 163 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~----------- 163 (560)
..++|||||+++++|.+++...+.+++..++.|+.||+.||.|||+ .||+||||||+|||++.++
T Consensus 204 ---~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~ 280 (467)
T PTZ00284 204 ---TGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL 280 (467)
T ss_pred ---CceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence 2468999999999999999888889999999999999999999998 5999999999999998765
Q ss_pred -----cEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhh
Q 008607 164 -----KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVH 238 (560)
Q Consensus 164 -----~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~ 238 (560)
.+||+|||++..... .....+||+.|+|||++.+ ..|+.++|||||||++|||++|++||.+.+..+
T Consensus 281 ~~~~~~vkl~DfG~~~~~~~------~~~~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~ 352 (467)
T PTZ00284 281 PPDPCRVRICDLGGCCDERH------SRTAIVSTRHYRSPEVVLG--LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE 352 (467)
T ss_pred CCCCceEEECCCCccccCcc------ccccccCCccccCcHHhhc--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 499999998754221 1245789999999999977 579999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCC---------CC--CCCCHHHHHHHHHhcccCCCCCCCH
Q 008607 239 QLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQ---------KF--PNANPLALRLLERMLAFEPKDRPTA 307 (560)
Q Consensus 239 ~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~--~~~s~~~~dLI~~mL~~DP~~Rpta 307 (560)
++..|.+.+|.++.+..........+.++.......+..... .+ ...++.+.|||.+||++||.+|||+
T Consensus 353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta 432 (467)
T PTZ00284 353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA 432 (467)
T ss_pred HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence 999999999988776655443333444443322211110000 00 0125678899999999999999999
Q ss_pred HHHhcCcccccccc
Q 008607 308 EEALADPYFKGLAK 321 (560)
Q Consensus 308 ~elL~hp~f~~~~~ 321 (560)
+|+|+||||.....
T Consensus 433 ~e~L~Hp~~~~~~~ 446 (467)
T PTZ00284 433 RQMTTHPYVLKYYP 446 (467)
T ss_pred HHHhcCccccccCC
Confidence 99999999987654
No 48
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.8e-47 Score=401.30 Aligned_cols=282 Identities=25% Similarity=0.359 Sum_probs=222.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.+|++++.||+|+||.||+|++..+++.||||+.. ...+.+|+++|+.|+||||+++++++... ...
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~~-----~~~ 158 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTYN-----KFT 158 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEEC-----Cee
Confidence 57999999999999999999999999999999753 23467899999999999999999988543 358
Q ss_pred EEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 103 YVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
++|||++.++|..++.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+|+.......
T Consensus 159 ~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 159 CLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred EEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 9999999999999998888899999999999999999999999999999999999999999999999999975322211
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC-------ChhhHHHHHHHhcCCCCHHHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-------NVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~-------~~~~~~~~i~~~~g~p~~~~~ 255 (560)
......+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+. +...++..+...+|.++.+..
T Consensus 238 -~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~ 314 (391)
T PHA03212 238 -NKYYGWAGTIATNAPELLAR--DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFP 314 (391)
T ss_pred -cccccccCccCCCChhhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcC
Confidence 12245689999999999976 57899999999999999999999776543 234567777777777654432
Q ss_pred HHhhhHHHHHHHHhhccCCC----CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKP----IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
..........++........ .+.......++..+.+||.+||++||.+|||++|+|+||||+.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~ 384 (391)
T PHA03212 315 IDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD 384 (391)
T ss_pred cchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence 11111111111111111111 1111112245678999999999999999999999999999987643
No 49
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-48 Score=401.97 Aligned_cols=254 Identities=31% Similarity=0.536 Sum_probs=222.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|...++||+|+.|.||.|+...+++.||||.+....+ ...+-+++|+.+|+..+|+|||.+++.|+.. ..+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q--~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~-----deL 345 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ--PKKELLLNEILVMRDLHHPNIVNFLDSYLVG-----DEL 345 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC--CchhhhHHHHHHHHhccchHHHHHHHHhccc-----cee
Confidence 568889999999999999999999999999999976433 3455688999999999999999999998665 459
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+|||||+| +|.+++... .++|.++..+++++|.||+|||.+||+|||||.+|||++.+|.+||+|||++........
T Consensus 346 WVVMEym~ggsLTDvVt~~-~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~ 424 (550)
T KOG0578|consen 346 WVVMEYMEGGSLTDVVTKT-RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS 424 (550)
T ss_pred EEEEeecCCCchhhhhhcc-cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence 999999995 888887665 599999999999999999999999999999999999999999999999999987654443
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
...+.+||++|||||+... ..|++++||||||+++.||+-|.+||-..+....+.+|.. .|+|.
T Consensus 425 ---KR~TmVGTPYWMAPEVvtr--k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~---------- 488 (550)
T KOG0578|consen 425 ---KRSTMVGTPYWMAPEVVTR--KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPK---------- 488 (550)
T ss_pred ---ccccccCCCCccchhhhhh--cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCC----------
Confidence 3477899999999999976 6899999999999999999999999998887776666654 23332
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
-.....+|+.++|||.+||+.|+.+|++|.|||+||||+
T Consensus 489 -----------------lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~ 527 (550)
T KOG0578|consen 489 -----------------LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLK 527 (550)
T ss_pred -----------------cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhh
Confidence 223457899999999999999999999999999999995
No 50
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6e-46 Score=388.26 Aligned_cols=333 Identities=42% Similarity=0.773 Sum_probs=278.5
Q ss_pred ccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-
Q 008607 18 EYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR- 96 (560)
Q Consensus 18 ~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~- 96 (560)
.|...++|++++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++|+||+++++++.....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3567889999999999999999999999999999999986544444445678899999999999999999998865432
Q ss_pred CCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 97 REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 97 ~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
.....+++||||++++|.+++.. ..++++.++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 90 ~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~ 168 (343)
T cd07880 90 DRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT 168 (343)
T ss_pred cccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence 22345799999998899888864 47999999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... .....++++|+|||.+.+. ..++.++|+|||||++|+|++|+.||.+.+....+..+....+.+..+...
T Consensus 169 ~~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T cd07880 169 DSE------MTGYVVTRWYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQ 241 (343)
T ss_pred ccC------ccccccCCcccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHH
Confidence 321 1345678999999998652 357889999999999999999999999998888888888888888888777
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchh
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEF 336 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~ 336 (560)
.+.......++..+.......+....+.+++.+.+||.+||..||.+|||+.+++.||||+.......++... .+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~~~~~~~~~---~~~~ 318 (343)
T cd07880 242 KLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHDPEDETEAP---PYDD 318 (343)
T ss_pred hhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcCcccccCCC---Cccc
Confidence 7777777777776665555555555678899999999999999999999999999999999887665544333 3455
Q ss_pred hHHhhcCCHHHHHHHHHHHHHhhCh
Q 008607 337 EFERRRITKEDVRELIYREILEYHP 361 (560)
Q Consensus 337 ~~e~~~~~~e~~~e~i~~ei~~~~p 361 (560)
+++....+-|+++.+.+-||+.++|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (343)
T cd07880 319 SFDEVDQSLEEWKRLTFTEILSFQP 343 (343)
T ss_pred cHHhhccchHHHHHHHHHHHHhcCC
Confidence 5777788899999999999998876
No 51
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.3e-46 Score=387.92 Aligned_cols=332 Identities=43% Similarity=0.831 Sum_probs=275.7
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~ 97 (560)
+...++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++..... .
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~ 92 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE 92 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence 556789999999999999999999999999999999997644444445678899999999999999999998754322 2
Q ss_pred CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 98 ~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
....+|+++++++++|.+++... .+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~~~~~~lv~~~~~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~ 171 (345)
T cd07877 93 EFNDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 171 (345)
T ss_pred ccccEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccc
Confidence 33468999999988998887654 69999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.. .....++.+|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+....+.+.......
T Consensus 172 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T cd07877 172 DE------MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 244 (345)
T ss_pred cc------ccccccCCCccCHHHHhCc-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 21 2346789999999988552 4678899999999999999999999999988888888999899988888877
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhh
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFE 337 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~ 337 (560)
+.....+.++..+.......+...+...++.+.+||.+||+.||.+||++.++|+||||+++.....++... .++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~~~~~~~---~~~~~ 321 (345)
T cd07877 245 ISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVAD---PYDQS 321 (345)
T ss_pred cccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCCccccCC---CccCc
Confidence 776666777776665555555555567789999999999999999999999999999999988776666443 24444
Q ss_pred HHhhcCCHHHHHHHHHHHHHhhCh
Q 008607 338 FERRRITKEDVRELIYREILEYHP 361 (560)
Q Consensus 338 ~e~~~~~~e~~~e~i~~ei~~~~p 361 (560)
++.+.+..+++....|.++..|-|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~ 345 (345)
T cd07877 322 FESRDLLIDEWKSLTYDEVISFVP 345 (345)
T ss_pred chhcccCHHHHHHHHHHHHHhcCC
Confidence 555566667788888988876654
No 52
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-47 Score=386.31 Aligned_cols=264 Identities=29% Similarity=0.443 Sum_probs=213.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
...+|...+.||+|+||.||++.+.++|...|||.+... +......+.+|+.+|+.|+|||||++++...... . .
T Consensus 15 ~~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~--~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~--~-~ 89 (313)
T KOG0198|consen 15 EISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE--DSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE--N-D 89 (313)
T ss_pred ccchhhhhccccCccceEEEEEEecCCCcceeeeeeecc--cchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc--C-e
Confidence 356799999999999999999999999999999998753 2222677899999999999999999999643221 1 3
Q ss_pred cEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEEeccccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL~DFGla~~~~ 177 (560)
.++|.|||+. |+|.++++..+ .|+++.++.+.+||++||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 90 ~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 90 EYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred eeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 6899999998 59999999877 7999999999999999999999999999999999999999 7999999999998765
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~-~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.............||+.|||||++... .....++|||||||++.||+||++||... .... .+..
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g-~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~---~~~~----------- 234 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNG-EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAE---ALLL----------- 234 (313)
T ss_pred cccccccccccccCCccccCchhhcCC-CcCCccchhhhcCCEEEeccCCCCcchhhcchHH---HHHH-----------
Confidence 311121223467899999999999741 22335999999999999999999999763 2111 1111
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..... .. ......+++++++||.+||.+||++||||+++|.|||....
T Consensus 235 ------------ig~~~-~~--P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~ 282 (313)
T KOG0198|consen 235 ------------IGRED-SL--PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN 282 (313)
T ss_pred ------------HhccC-CC--CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence 11111 11 13345689999999999999999999999999999999754
No 53
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-47 Score=389.99 Aligned_cols=272 Identities=28% Similarity=0.436 Sum_probs=221.7
Q ss_pred cccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc------------cChhHHHHHHHHHHHHHhcCCC
Q 008607 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF------------EHVSDATRILREIKLLRLLRHP 82 (560)
Q Consensus 15 ~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~------------~~~~~~~~i~rEi~iL~~l~Hp 82 (560)
-+...-.-++|++.+.||+|.||+|.+|++..+++.||||++.+.- ......+++.+||.+|++|.||
T Consensus 89 ~~~~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~ 168 (576)
T KOG0585|consen 89 DDQDRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHP 168 (576)
T ss_pred CcccceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCc
Confidence 3445566789999999999999999999999999999999996421 1122246789999999999999
Q ss_pred CccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 83 DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 83 nIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~-lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
|||+|+++.-++ ....+|||+|||.. .+. +.-.... +++++++.|++.++.||.|||.+|||||||||+|+||+
T Consensus 169 nVV~LiEvLDDP---~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~ 244 (576)
T KOG0585|consen 169 NVVKLIEVLDDP---ESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS 244 (576)
T ss_pred CeeEEEEeecCc---ccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc
Confidence 999999998443 34689999999994 443 3333344 99999999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCC--CCCcccccccccCccccccccccccc--CCCCCccchhhHHHHHHHHhhCCCCCCCCCh
Q 008607 161 ADCKLKICDFGLARVAFND--TPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNV 236 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~--~~~~~~~~~~~gT~~Y~APEll~~~~--~~y~~~~DIWSlG~il~eLltG~~pF~~~~~ 236 (560)
++|++||+|||.+.....+ ......+...+|||.|+|||+|.+.. ...+.+.||||+||+||.|+.|+.||.+...
T Consensus 245 ~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~ 324 (576)
T KOG0585|consen 245 SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE 324 (576)
T ss_pred CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH
Confidence 9999999999998754221 22223345579999999999996521 2245689999999999999999999999988
Q ss_pred hhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 237 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.+.+++|.. .+..+ ...+++...++|||.+||.+||++|+++.+|..|||.
T Consensus 325 ~~l~~KIvn----------------------------~pL~f-P~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwv 375 (576)
T KOG0585|consen 325 LELFDKIVN----------------------------DPLEF-PENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWV 375 (576)
T ss_pred HHHHHHHhc----------------------------CcccC-CCcccccHHHHHHHHHHhhcChhheeehhhheeccee
Confidence 888777653 12222 2234678999999999999999999999999999998
Q ss_pred ccc
Q 008607 317 KGL 319 (560)
Q Consensus 317 ~~~ 319 (560)
..-
T Consensus 376 t~~ 378 (576)
T KOG0585|consen 376 TRD 378 (576)
T ss_pred ccC
Confidence 754
No 54
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1e-45 Score=386.28 Aligned_cols=331 Identities=41% Similarity=0.775 Sum_probs=266.8
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-C
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-R 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~ 97 (560)
|....+|.+.+.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++|+||+++++++..... .
T Consensus 11 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~ 90 (342)
T cd07879 11 WELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGD 90 (342)
T ss_pred hccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCC
Confidence 445678999999999999999999999999999999987544333445668899999999999999999998864322 2
Q ss_pred CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 98 ~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
....+|+|+||+..+|..++ ...++++.++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...
T Consensus 91 ~~~~~~lv~e~~~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~ 168 (342)
T cd07879 91 EFQDFYLVMPYMQTDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD 168 (342)
T ss_pred CCceEEEEecccccCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence 33467999999998887765 3369999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.. .....++..|+|||.+.+. ..++.++|||||||++|+|++|+.||.+.+....+..+....|.+.+.....
T Consensus 169 ~~------~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 169 AE------MTGYVVTRWYRAPEVILNW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred CC------CCCceeeecccChhhhcCc-cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 21 2345788999999998652 3578899999999999999999999999998888899999999888887776
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhh
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFE 337 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~ 337 (560)
........+...+.......+...++..++.+.+||++||+.||.+||+++++|.||||..+.....++...+ +...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~~~~~~~~~---~~~~ 318 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDADEETEQQP---YDDS 318 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccccccCCCCc---ccch
Confidence 6655555555544443444455556778899999999999999999999999999999999876554443322 2333
Q ss_pred HHhhcCCHHHHHHHHHHHHHhhCh
Q 008607 338 FERRRITKEDVRELIYREILEYHP 361 (560)
Q Consensus 338 ~e~~~~~~e~~~e~i~~ei~~~~p 361 (560)
-+......+++...||.|+..+.|
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~ 342 (342)
T cd07879 319 LENEKLSVDEWKKHIYKEVKSFSP 342 (342)
T ss_pred hhhhhCCHHHHHHHhhhhhhccCC
Confidence 344456667788888887655443
No 55
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-46 Score=382.88 Aligned_cols=275 Identities=28% Similarity=0.430 Sum_probs=225.0
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
-.+.+.|++.++||.|..++||+|+...+++.||||+++....+ .+...+.+|+..|+.++||||++++..|....
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~-~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~--- 97 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN-NDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS--- 97 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh-hhHHHHHHHHHHhhhcCCCCcceEEEEEEecc---
Confidence 34578899999999999999999999999999999999854333 34788999999999999999999999997654
Q ss_pred CccEEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
.+|+||.||. |++.++++.. ..|+|..+..|++++|+||.|||.+|-||||||+.||||+.+|.|||+|||.+..
T Consensus 98 --~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~ 175 (516)
T KOG0582|consen 98 --ELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSAS 175 (516)
T ss_pred --eeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeee
Confidence 5999999998 6999999873 3599999999999999999999999999999999999999999999999999877
Q ss_pred ccCCCCCcccc-cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFW-TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~-~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
........... ...+||++|||||++...-.+|+.|+||||||++..||.+|..||..--.... ++.++-+.|+--.
T Consensus 176 l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv--Ll~tLqn~pp~~~ 253 (516)
T KOG0582|consen 176 LFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV--LLLTLQNDPPTLL 253 (516)
T ss_pred ecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH--HHHHhcCCCCCcc
Confidence 65544333222 67899999999999654447899999999999999999999999976544332 2334444443111
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
+.....+. ....+..++.+|..||+.||.+||||+++|+|+||+...
T Consensus 254 t~~~~~d~-------------------~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 254 TSGLDKDE-------------------DKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred cccCChHH-------------------hhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 11111111 123355789999999999999999999999999998654
No 56
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.8e-46 Score=382.88 Aligned_cols=253 Identities=23% Similarity=0.377 Sum_probs=213.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+|+.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD-----QRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc-----CCe
Confidence 46999999999999999999999999999999986421 122344568899999999999999999987743 346
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||+. ++|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 899999998 5899999988889999999999999999999999999999999999999999999999999997653221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 156 ------~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~-------------- 213 (291)
T cd05612 156 ------WTLCGTPEYLAPEVIQS--KGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG-------------- 213 (291)
T ss_pred ------ccccCChhhcCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 23579999999999976 57889999999999999999999999887755444333210
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~ 319 (560)
. .. .....++.+.+||++||+.||.+|++ ++++++||||+.+
T Consensus 214 ------------~--~~---~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 214 ------------K--LE---FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred ------------C--cC---CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 0 01 11245788999999999999999995 9999999999864
No 57
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.5e-45 Score=383.13 Aligned_cols=326 Identities=50% Similarity=0.845 Sum_probs=269.4
Q ss_pred ceEEEEEEeecCCeEEEEEEECCC--CcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRT--GEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~t--g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~ 100 (560)
+|++.+.||+|+||.||++.+..+ +..||||++............+.+|+.+++.++ |+||+++++...... ....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCC
Confidence 589999999999999999999988 999999998765444444567889999999995 999999988754321 2335
Q ss_pred cEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 101 DIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
.+|+++++++++|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~ 159 (332)
T cd07857 80 ELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP 159 (332)
T ss_pred cEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence 68999999999999999888889999999999999999999999999999999999999999999999999997643222
Q ss_pred CC-cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 181 PT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 181 ~~-~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. .......+||..|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...+|.|..+.+..+.
T Consensus 160 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (332)
T cd07857 160 GENAGFMTEYVATRWYRAPEIMLSF-QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIG 238 (332)
T ss_pred ccccccccCcccCccccCcHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhh
Confidence 11 1112346799999999987542 468899999999999999999999999999999999999999999988887777
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhHH
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFE 339 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~e 339 (560)
......++..+.......+....+..+..+.+||.+||+.||.+|||+.++|.||||+.+......+.|.......|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~- 317 (332)
T cd07857 239 SPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDDEPVCQKPFDFSFES- 317 (332)
T ss_pred hhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccccccccccccCCccc-
Confidence 7766666666655555566666777899999999999999999999999999999999998776777676655555442
Q ss_pred hhcCCHHHHHHHHHH
Q 008607 340 RRRITKEDVRELIYR 354 (560)
Q Consensus 340 ~~~~~~e~~~e~i~~ 354 (560)
.-+.++++..|..
T Consensus 318 --~~~~~~~~~~~~~ 330 (332)
T cd07857 318 --EDSMEELRDMIIE 330 (332)
T ss_pred --cccHHHHHHHHhh
Confidence 2345666666544
No 58
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.6e-46 Score=386.93 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=214.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
-+.|++.+.||+|+||.||+|++..+++.||||++.... ........+.+|+.+|+.++||||+++++++... .
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~ 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDE-----N 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcC-----C
Confidence 367999999999999999999999999999999986421 2223456788999999999999999999988543 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+||||+. ++|.+++...+.++++.++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 6899999998 599999998888999999999999999999999999999999999999999999999999999765322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. ...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 172 ~------~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~-------------- 229 (329)
T PTZ00263 172 T------FTLCGTPEYLAPEVIQS--KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA-------------- 229 (329)
T ss_pred c------ceecCChhhcCHHHHcC--CCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc--------------
Confidence 1 24579999999999976 5788999999999999999999999987765443333221
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKG 318 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~ 318 (560)
.. .. ....++..+.+||++||+.||.+|++ +++++.||||++
T Consensus 230 ------------~~--~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 230 ------------GR--LK---FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred ------------CC--cC---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 00 01 11246788999999999999999997 799999999985
No 59
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=8.8e-46 Score=381.54 Aligned_cols=281 Identities=34% Similarity=0.610 Sum_probs=216.9
Q ss_pred EEEEeecCCeEEEEEEEC--CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 28 EEVIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~--~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
.++||+|+||+||+|+++ .+++.||+|.+... .....+.+|+.+|+.++||||+++++++.... ...+|+|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT----GISMSACREIALLRELKHPNVISLQKVFLSHA---DRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC----CCcHHHHHHHHHHHhcCCCCCcceeeeEecCC---CcEEEEE
Confidence 357999999999999976 47789999998642 12345678999999999999999999885432 2468999
Q ss_pred EecCCccHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeee----CCCCcEEEecccc
Q 008607 106 FELMESDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLKICDFGL 172 (560)
Q Consensus 106 ~E~~~gdL~~~i~~~---------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl----~~~~~lKL~DFGl 172 (560)
|||++++|.+++... ..+++..++.++.||+.||+|||+.||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 999999999888642 248999999999999999999999999999999999999 4567899999999
Q ss_pred cccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCCh---------hhHHHHH
Q 008607 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---------VHQLDIM 243 (560)
Q Consensus 173 a~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~---------~~~~~~i 243 (560)
++...............+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+. .+++..+
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRI 237 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCC-CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHH
Confidence 98654332222223457899999999998652 4588999999999999999999999976542 4677888
Q ss_pred HHhcCCCCHHHHHHhhhHH-HHHHHHhhccCCC--C----CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 244 TDLLGTPSPEAIARVRNEK-ARRYLSSMRKKKP--I----PFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 244 ~~~~g~p~~~~~~~~~~~~-~~~~l~~~~~~~~--~----~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...+|.|....+....... ....+..+..... . .+.......+..+.+||++||++||.+|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 238 FNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 8999988877665543211 1111111111100 0 0011122346779999999999999999999999999998
No 60
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1e-45 Score=385.02 Aligned_cols=331 Identities=44% Similarity=0.764 Sum_probs=271.6
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~ 98 (560)
.+.++|++.+.||+|+||.||+|.+..+|+.+|||++...+........+.+|+.+++.+ +|+||+++++++....
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~--- 80 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN--- 80 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCC---
Confidence 345789999999999999999999999999999999876554555566778999999999 9999999999875422
Q ss_pred CccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
...+|+||||+.++|.+++..+ .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 81 ~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~ 159 (337)
T cd07852 81 DKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE 159 (337)
T ss_pred CceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence 2458999999999999999776 789999999999999999999999999999999999999999999999999986543
Q ss_pred CCCC--cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 179 DTPT--AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 179 ~~~~--~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.... ......++||.+|+|||++.+. ..++.++|||||||++|+|++|+.||.+....+.+..+....+.+..+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
T cd07852 160 LEENPENPVLTDYVATRWYRAPEILLGS-TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE 238 (337)
T ss_pred ccccccCcchhcccccccccCceeeecc-ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence 3211 1223456799999999987542 467889999999999999999999999999999999999999999888887
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchh
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEF 336 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~ 336 (560)
.+........+...............+.++..+.+||.+||+.||.+|||+.++|+||||+++.....+++........+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (337)
T cd07852 239 SIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSDEPVLPYPITIPL 318 (337)
T ss_pred HHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCCCCCCCCCccCCc
Confidence 77766666666665555555566667778999999999999999999999999999999999876666654432222222
Q ss_pred hHHhhcCCHHHHHHHHHHHH
Q 008607 337 EFERRRITKEDVRELIYREI 356 (560)
Q Consensus 337 ~~e~~~~~~e~~~e~i~~ei 356 (560)
. ..+.+...++|..+|+||
T Consensus 319 ~-~~~~~~~~~~~~~~~~~~ 337 (337)
T cd07852 319 D-DNVKLSVAEYRNKLYEEI 337 (337)
T ss_pred c-ccceeeHHHHHhhhhhcC
Confidence 2 335566677777777653
No 61
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=4.8e-46 Score=385.64 Aligned_cols=250 Identities=25% Similarity=0.451 Sum_probs=209.7
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
+.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+|+.++||||+.+++++... ..+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTH-----DRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcC-----CEEEEEEe
Confidence 46999999999999999999999999987432 2233456778999999999999999999988443 46899999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
|+. ++|.+++..++.+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---~~~ 152 (323)
T cd05571 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---ATM 152 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---Ccc
Confidence 998 5899999888889999999999999999999999999999999999999999999999999987532211 122
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
...+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+....+..+..
T Consensus 153 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~--------------------- 209 (323)
T cd05571 153 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------------- 209 (323)
T ss_pred cceecCccccChhhhcC--CCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHc---------------------
Confidence 45689999999999976 5789999999999999999999999988765444333221
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
. .. .....+++.+.+||++||+.||++|| ++.++++||||.++
T Consensus 210 -----~--~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 210 -----E--EI---RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred -----C--CC---CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 0 00 11235788999999999999999999 89999999999864
No 62
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=386.61 Aligned_cols=263 Identities=31% Similarity=0.520 Sum_probs=226.6
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~ 96 (560)
..+...|++.+.||+|.||+||+|+++.||+.+|+|+|.+... ...+...+.+|+.+|+.|. |||||.++++|.+.
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~-- 108 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDP-- 108 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC--
Confidence 3456789999999999999999999999999999999975433 2234567899999999999 99999999999544
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC----CcEEEeccc
Q 008607 97 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD----CKLKICDFG 171 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~----~~lKL~DFG 171 (560)
..+|+|||+|. |+|++.|.+. .+++..+..++.||+.|++|||+.||+||||||+|+|+... +.+|++|||
T Consensus 109 ---~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 109 ---DSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred ---CeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 47999999999 5999999887 49999999999999999999999999999999999998654 479999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
++..... .......|||+.|+|||++.. ..|+..+||||+||++|.|++|.+||.+.+.......|..
T Consensus 185 la~~~~~----~~~~~~~~Gtp~y~APEvl~~--~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~------ 252 (382)
T KOG0032|consen 185 LAKFIKP----GERLHTIVGTPEYVAPEVLGG--RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR------ 252 (382)
T ss_pred CceEccC----CceEeeecCCccccCchhhcC--CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc------
Confidence 9987654 223477899999999999986 6899999999999999999999999999886655544332
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.........|+.++..+.+||++||.+||.+|+|+.++|+|||+++..
T Consensus 253 ---------------------~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~ 300 (382)
T KOG0032|consen 253 ---------------------GDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIG 300 (382)
T ss_pred ---------------------CCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCCc
Confidence 112233466788999999999999999999999999999999998753
No 63
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.8e-45 Score=376.72 Aligned_cols=291 Identities=35% Similarity=0.636 Sum_probs=233.9
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
|+.-++|++.+.||+|+||.||+|.+..+++.||+|.+..... ......+.+|+.+++.++|+||+++++++...
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~---- 76 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTE---- 76 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc-cCchhHHHHHHHHHHhcCCCCcceEEEEEecC----
Confidence 4566789999999999999999999999999999999864322 22334577899999999999999999998543
Q ss_pred CccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..+|+||||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++....
T Consensus 77 -~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 155 (301)
T cd07873 77 -KSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKS 155 (301)
T ss_pred -CeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccC
Confidence 468999999999999988764 468999999999999999999999999999999999999999999999999997543
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... ......+++.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...++.|....+..
T Consensus 156 ~~~~---~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (301)
T cd07873 156 IPTK---TYSNEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 231 (301)
T ss_pred CCCC---cccccceeecccCcHHHhCC-CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchh
Confidence 2211 12345678999999998652 4578899999999999999999999999999899999999999887766544
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
+........ ...............+.+++.+.+||.+||+.||.+|||++|+|+||||+.+.
T Consensus 232 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 232 ILSNEEFKS-YNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred hhccccccc-cccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 322110000 00000011111122356788999999999999999999999999999998765
No 64
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=398.05 Aligned_cols=256 Identities=25% Similarity=0.451 Sum_probs=221.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~ 100 (560)
..|.++++||+|+||+|++|..+.+++.+|||++++. .....+......|.+|+.... ||.++.++..|.+.+
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~----- 442 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE----- 442 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC-----
Confidence 5799999999999999999999999999999999853 345567788899999998886 999999999997664
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++|+||||+.| | ...+...+.|++..+++|+..|+.||+|||++||||||||.+|||+|.+|.+||+|||+++-.-.
T Consensus 443 ~l~fvmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~- 520 (694)
T KOG0694|consen 443 HLFFVMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG- 520 (694)
T ss_pred eEEEEEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC-
Confidence 69999999986 6 44445556899999999999999999999999999999999999999999999999999985432
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.....++.|||+.|+|||++.+ ..|+.++|.|||||+|||||.|..||+|.+..+.++.|..-
T Consensus 521 --~g~~TsTfCGTpey~aPEil~e--~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------------- 583 (694)
T KOG0694|consen 521 --QGDRTSTFCGTPEFLAPEVLTE--QSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------------- 583 (694)
T ss_pred --CCCccccccCChhhcChhhhcc--CcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC-------------
Confidence 2223477999999999999988 78999999999999999999999999999988877766430
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGLA 320 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~~ 320 (560)
. ......++.+++++|++||.+||++|.. +++|.+||||+.+.
T Consensus 584 --------------~----~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~ 631 (694)
T KOG0694|consen 584 --------------E----VRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID 631 (694)
T ss_pred --------------C----CCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence 0 1112367899999999999999999975 68899999999764
No 65
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1e-46 Score=377.89 Aligned_cols=255 Identities=30% Similarity=0.538 Sum_probs=223.7
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecC-cccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-IFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~-~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
..-.||++.+.||+|.||.|-+|++...|+.||||.|++ ...+..+..+|.|||+||..|+||||+.++.+| ++
T Consensus 50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-----EN 124 (668)
T KOG0611|consen 50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-----EN 124 (668)
T ss_pred chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh-----cC
Confidence 455789999999999999999999999999999999974 456677888999999999999999999999999 44
Q ss_pred CccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
...+.|||||.. |+|+++|...+.|+|.++++||+||+.|+.|||.++++|||||.+|||+|.||++||+||||+..+.
T Consensus 125 kdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 125 KDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred CceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 456999999998 6999999999999999999999999999999999999999999999999999999999999997764
Q ss_pred CCCCCcccccccccCcccccccccccccCCC-CCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKY-TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y-~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
. ..++.++||++.|.+||++.+ ..| ++.+|.|||||+||.|+.|..||.|.+....+..|....-
T Consensus 205 ~----~kfLqTFCGSPLYASPEIvNG--~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaY-------- 270 (668)
T KOG0611|consen 205 D----KKFLQTFCGSPLYASPEIVNG--TPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAY-------- 270 (668)
T ss_pred c----ccHHHHhcCCcccCCccccCC--CCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccc--------
Confidence 3 336688999999999999988 455 5889999999999999999999999987666555543110
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
. -|.-+..+.-||+.||-.||++|.|+++|-.|=|.+
T Consensus 271 ----------------r--------EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 271 ----------------R--------EPETPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred ----------------c--------CCCCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 0 123355688899999999999999999999997765
No 66
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2e-45 Score=386.74 Aligned_cols=262 Identities=26% Similarity=0.436 Sum_probs=214.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++++.||+|+||.||+|++..+|+.||||++.... ........+.+|+.+|+.++|+||+++++.+... ..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-----~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDE-----NY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC-----Ce
Confidence 46999999999999999999999999999999997421 1223445678899999999999999999998543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|||||||. |+|.+++...+.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 899999997 5999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CCc-----------------------------------ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHh
Q 008607 181 PTA-----------------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225 (560)
Q Consensus 181 ~~~-----------------------------------~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLl 225 (560)
... ......+||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQ--TGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcC--CCCCCeeeeecchhHHHHhh
Confidence 000 01123579999999999976 57899999999999999999
Q ss_pred hCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC
Q 008607 226 TGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP 305 (560)
Q Consensus 226 tG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp 305 (560)
+|.+||.+.+....+..+... .....+. ....+++.+.+||++||. ||.+|+
T Consensus 234 ~G~~Pf~~~~~~~~~~~i~~~--------------------------~~~~~~~-~~~~~s~~~~~li~~ll~-~p~~R~ 285 (364)
T cd05599 234 VGYPPFCSDNPQETYRKIINW--------------------------KETLQFP-DEVPLSPEAKDLIKRLCC-EAERRL 285 (364)
T ss_pred cCCCCCCCCCHHHHHHHHHcC--------------------------CCccCCC-CCCCCCHHHHHHHHHHcc-CHhhcC
Confidence 999999887765544333211 0001111 112468899999999997 999999
Q ss_pred C---HHHHhcCcccccc
Q 008607 306 T---AEEALADPYFKGL 319 (560)
Q Consensus 306 t---a~elL~hp~f~~~ 319 (560)
+ ++|+|+||||++.
T Consensus 286 ~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 286 GNNGVNEIKSHPFFKGV 302 (364)
T ss_pred CCCCHHHHhcCCCcCCC
Confidence 8 9999999999864
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.4e-45 Score=381.72 Aligned_cols=261 Identities=25% Similarity=0.468 Sum_probs=217.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+|+.++||||+++++++.. ...
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQD-----DEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc-----CCE
Confidence 469999999999999999999999999999999974322 22345668899999999999999999998843 346
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||||++ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 899999998 59999998888899999999999999999999999999999999999999999999999999976433
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|..||.+.+..+.+..+......
T Consensus 154 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~----------- 216 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLRG--KGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKET----------- 216 (333)
T ss_pred ----ccCCcccCccccChhHhcC--CCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccc-----------
Confidence 1245689999999999977 57899999999999999999999999987766554443321000
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
+ ..+ ........+++.+.+||.+||..+|.+||+++++++||||.+.
T Consensus 217 ---------~--~~~-~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 217 ---------L--QRP-VYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred ---------c--cCC-CCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 0 000 0111113568899999999999999999999999999999865
No 68
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.7e-45 Score=385.24 Aligned_cols=262 Identities=25% Similarity=0.382 Sum_probs=212.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||+|+||+||+|.+..+++.||||++..... .......+.+|+.++..++|+||+++++.+.. ...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~-----~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQD-----KLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEec-----CCe
Confidence 469999999999999999999999999999999974321 22334567889999999999999999998843 346
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|||||||+ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 899999998 5999999988899999999999999999999999999999999999999999999999999987542211
Q ss_pred CC--------------------------------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCC
Q 008607 181 PT--------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (560)
Q Consensus 181 ~~--------------------------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~ 228 (560)
.. .......+||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~--~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcC--CCCCCchhhhhhHHHHHHHHhCC
Confidence 00 001134689999999999976 57899999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCC---CCC
Q 008607 229 PLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPK---DRP 305 (560)
Q Consensus 229 ~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~---~Rp 305 (560)
.||.+.+..+.+..+.... ....+.. ...+++.+++||.+||. +|. .||
T Consensus 234 ~Pf~~~~~~~~~~~i~~~~--------------------------~~~~~p~-~~~~s~~~~~li~~l~~-~~~~r~~r~ 285 (363)
T cd05628 234 PPFCSETPQETYKKVMNWK--------------------------ETLIFPP-EVPISEKAKDLILRFCC-EWEHRIGAP 285 (363)
T ss_pred CCCCCCCHHHHHHHHHcCc--------------------------CcccCCC-cCCCCHHHHHHHHHHcC-ChhhcCCCC
Confidence 9999877665554443210 0111111 12468899999999876 454 458
Q ss_pred CHHHHhcCcccccc
Q 008607 306 TAEEALADPYFKGL 319 (560)
Q Consensus 306 ta~elL~hp~f~~~ 319 (560)
+++||++||||++.
T Consensus 286 ~~~ei~~hp~f~~~ 299 (363)
T cd05628 286 GVEEIKTNPFFEGV 299 (363)
T ss_pred CHHHHhCCCCCCCC
Confidence 99999999999864
No 69
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-47 Score=363.96 Aligned_cols=263 Identities=29% Similarity=0.492 Sum_probs=220.7
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-----Chh-HHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-----HVS-DATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-----~~~-~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~ 96 (560)
.|.-.++||+|..++|-.+.++.||..+|+|+|..... +.. -.+...+|+.||+++. ||+|+.+.++|.+++
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s- 96 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA- 96 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc-
Confidence 47777899999999999999999999999999964221 111 1244568999999985 999999999996655
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 97 REFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
.+++|||+|. |.|++++...-.++|...+.|++||+.|+.|||.++|+||||||+|||++++.++||+|||+|+.
T Consensus 97 ----F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 97 ----FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred ----hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeec
Confidence 4899999998 89999999888899999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCccccccccccc----ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGS----FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~----~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
...+. .+...||||.|.|||.+.- ...+|+..+|+|++|||+|.||.|.+||-.....-.+..|..
T Consensus 173 l~~Ge----kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~Ime------ 242 (411)
T KOG0599|consen 173 LEPGE----KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIME------ 242 (411)
T ss_pred cCCch----hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHh------
Confidence 65444 4578999999999998742 124688999999999999999999999976554444444432
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
.+...-+..|.+++..++|||.+||+.||.+|+|++|+|+||||..+...
T Consensus 243 ---------------------GkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~ 292 (411)
T KOG0599|consen 243 ---------------------GKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQ 292 (411)
T ss_pred ---------------------cccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHh
Confidence 22222345677889999999999999999999999999999999876543
No 70
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.2e-45 Score=387.37 Aligned_cols=263 Identities=23% Similarity=0.361 Sum_probs=211.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||+|+||+||+|++..+++.||||++... .........+.+|+.+|+.++|+||+++++.+... ..
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~-----~~ 75 (381)
T cd05626 1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDK-----DN 75 (381)
T ss_pred CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecC-----CE
Confidence 3699999999999999999999999999999999742 22334456788999999999999999999998543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+|||||+ |+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 76 LYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999997 5999999888889999999999999999999999999999999999999999999999999975321000
Q ss_pred C--------------------------------------------CcccccccccCcccccccccccccCCCCCccchhh
Q 008607 181 P--------------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216 (560)
Q Consensus 181 ~--------------------------------------------~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWS 216 (560)
. ........+||+.|+|||++.+ ..|+.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DiwS 233 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR--KGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcC--CCCCCccceee
Confidence 0 0000124589999999999976 57899999999
Q ss_pred HHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHh
Q 008607 217 IGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 296 (560)
Q Consensus 217 lG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~m 296 (560)
|||++|||++|+.||.+.+..+....+..... . .. ......+++.+.+||.+|
T Consensus 234 lG~il~elltG~~Pf~~~~~~~~~~~i~~~~~------------------------~--~~-~~~~~~~s~~~~dli~~l 286 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTETQLKVINWEN------------------------T--LH-IPPQVKLSPEAVDLITKL 286 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc------------------------c--cC-CCCCCCCCHHHHHHHHHH
Confidence 99999999999999988765443333221100 0 00 111235789999999996
Q ss_pred ccc--CCCCCCCHHHHhcCcccccc
Q 008607 297 LAF--EPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 297 L~~--DP~~Rpta~elL~hp~f~~~ 319 (560)
|.. ++..|++++|+++||||+++
T Consensus 287 l~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 287 CCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred ccCcccccCCCCHHHHhcCcccCCC
Confidence 654 55559999999999999864
No 71
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3.5e-45 Score=387.87 Aligned_cols=262 Identities=24% Similarity=0.378 Sum_probs=212.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|+++++||+|+||.||+|++..+++.||||++.... ........+.+|+.+|+.++|+||+++++.+... ..
T Consensus 1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~-----~~ 75 (382)
T cd05625 1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-----DN 75 (382)
T ss_pred CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeC-----CE
Confidence 36999999999999999999999999999999987421 1223456788999999999999999999998543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 76 LYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999998 5999999888889999999999999999999999999999999999999999999999999975321000
Q ss_pred C--------------------------------------------CcccccccccCcccccccccccccCCCCCccchhh
Q 008607 181 P--------------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216 (560)
Q Consensus 181 ~--------------------------------------------~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWS 216 (560)
. ........+||+.|+|||++.+ ..|+.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~DiwS 233 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcC--CCCCCeeeEEe
Confidence 0 0000123579999999999976 57899999999
Q ss_pred HHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHh
Q 008607 217 IGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 296 (560)
Q Consensus 217 lG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~m 296 (560)
|||++|||++|++||.+.+.......+... ...... .....+++.+.+||.+|
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~------------------------~~~~~~---p~~~~~s~~~~~li~~l 286 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTPLETQMKVINW------------------------QTSLHI---PPQAKLSPEASDLIIKL 286 (382)
T ss_pred chHHHHHHHhCCCCCCCCCHHHHHHHHHcc------------------------CCCcCC---CCcccCCHHHHHHHHHH
Confidence 999999999999999887654433332211 000000 11245789999999998
Q ss_pred cccCCCCCCC---HHHHhcCcccccc
Q 008607 297 LAFEPKDRPT---AEEALADPYFKGL 319 (560)
Q Consensus 297 L~~DP~~Rpt---a~elL~hp~f~~~ 319 (560)
+ .||.+|++ ++|+++||||++.
T Consensus 287 ~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 287 C-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred c-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 7 49999997 9999999999864
No 72
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=4e-45 Score=371.63 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=210.2
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+|+.++|+||+.+++.+... ..++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~-----~~~~ 76 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETK-----DALC 76 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccC-----CeEE
Confidence 8899999999999999999999999999999864322 222334578999999999999999999988433 4689
Q ss_pred EEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|||||. |+|..++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 9999998 5888777543 368999999999999999999999999999999999999999999999999997643222
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.....+||..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 157 ----~~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-------------- 216 (285)
T cd05631 157 ----TVRGRVGTVGYMAPEVINN--EKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRR-------------- 216 (285)
T ss_pred ----eecCCCCCCCccCHhhhcC--CCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHH--------------
Confidence 1244679999999999976 57899999999999999999999999876643322222111
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGLA 320 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~~ 320 (560)
+. .. .......+++.+.+||++||+.||.+||+ ++++++||||.++.
T Consensus 217 ---------~~-~~---~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 217 ---------VK-ED---QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred ---------hh-cc---cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 00 00 01123457889999999999999999997 99999999998753
No 73
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.1e-45 Score=387.58 Aligned_cols=262 Identities=24% Similarity=0.399 Sum_probs=211.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||+|+||.||+|.+..+++.||||++.+.. ........+.+|+++|+.++||||+++++.+... ..
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-----~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDA-----QY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----Ce
Confidence 46999999999999999999999999999999986421 1223456788999999999999999999998543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||||++ |+|.+++...+.+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 899999997 5999999888889999999999999999999999999999999999999999999999999996321100
Q ss_pred CC------------c--------------------------------ccccccccCcccccccccccccCCCCCccchhh
Q 008607 181 PT------------A--------------------------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 216 (560)
Q Consensus 181 ~~------------~--------------------------------~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWS 216 (560)
.. . ......+||+.|+|||++.+ ..++.++||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwS 233 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ--QGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHcc--CCCCCceeeEe
Confidence 00 0 00013579999999999976 57899999999
Q ss_pred HHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHh
Q 008607 217 IGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERM 296 (560)
Q Consensus 217 lG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~m 296 (560)
|||++|||++|.+||.+.+..+.+..+.... . ...+ .....++..+.+||.+|
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~~i~~~~------------------------~--~~~~-p~~~~~s~~~~dli~~l 286 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSHETYRKIINWR------------------------E--TLYF-PDDIHLSVEAEDLIRRL 286 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHHHHHHHHHccC------------------------C--ccCC-CCCCCCCHHHHHHHHHH
Confidence 9999999999999998877655544433210 0 0111 11224688999999999
Q ss_pred cccCCCCC---CCHHHHhcCcccccc
Q 008607 297 LAFEPKDR---PTAEEALADPYFKGL 319 (560)
Q Consensus 297 L~~DP~~R---pta~elL~hp~f~~~ 319 (560)
|. +|.+| +++.|+|.||||++.
T Consensus 287 L~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 287 IT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 98 77765 599999999999863
No 74
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-45 Score=372.46 Aligned_cols=264 Identities=26% Similarity=0.409 Sum_probs=222.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||.|.-|+||+|+...++..+|+|++.+... ......++..|-+||..+.||.++.||..|.+ ...
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet-----~~~ 151 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFET-----DKY 151 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeec-----cce
Confidence 578999999999999999999999999999999986432 34556788899999999999999999999944 356
Q ss_pred EEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+|+|||||. |||+.+.++. ..|+++.+++|+.+++.||+|||..|||+|||||+||||.++|+|.|+||.|+.....
T Consensus 152 ~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 152 SCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred eEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 999999998 5999998764 4699999999999999999999999999999999999999999999999999853210
Q ss_pred ---------------------------------C--------------------CCCcccccccccCccccccccccccc
Q 008607 179 ---------------------------------D--------------------TPTAIFWTDYVATRWYRAPELCGSFF 205 (560)
Q Consensus 179 ---------------------------------~--------------------~~~~~~~~~~~gT~~Y~APEll~~~~ 205 (560)
. .+.......+|||-.|.|||++.|
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-- 309 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-- 309 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec--
Confidence 0 001112235799999999999988
Q ss_pred CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCC
Q 008607 206 SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNA 285 (560)
Q Consensus 206 ~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 285 (560)
...+.++|.|+|||++||||.|.-||.|.+..+.+..|.. ++..|.. .+.+
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~----------------------------~~l~Fp~-~~~v 360 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVG----------------------------QPLKFPE-EPEV 360 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhc----------------------------CCCcCCC-CCcc
Confidence 6788999999999999999999999999997776655432 1122222 2366
Q ss_pred CHHHHHHHHHhcccCCCCCCC----HHHHhcCccccccccc
Q 008607 286 NPLALRLLERMLAFEPKDRPT----AEEALADPYFKGLAKV 322 (560)
Q Consensus 286 s~~~~dLI~~mL~~DP~~Rpt----a~elL~hp~f~~~~~~ 322 (560)
+..++|||+++|.+||.+|.. |.||-+||||+++...
T Consensus 361 s~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWa 401 (459)
T KOG0610|consen 361 SSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWA 401 (459)
T ss_pred hhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChh
Confidence 789999999999999999998 9999999999987654
No 75
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4.2e-45 Score=369.81 Aligned_cols=282 Identities=38% Similarity=0.621 Sum_probs=225.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|+||.||+|++..+|+.||+|.+............+.+|+.+++.++|+||+++++++... ..+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSD-----KKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccC-----CceE
Confidence 59999999999999999999999999999999875333333345677899999999999999999988433 4689
Q ss_pred EEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+|+||++++|.+++.. .+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 154 (284)
T cd07839 76 LVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR- 154 (284)
T ss_pred EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-
Confidence 9999999999998875 45799999999999999999999999999999999999999999999999999975432211
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCC-CCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~p-F~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||++.+. ..++.++|||||||++|+|++|..| |.+.+...++..+.+.++.+....+..+...
T Consensus 155 --~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07839 155 --CYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL 231 (284)
T ss_pred --CcCCCccccCCcChHHHhCC-cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence 12345788999999998652 4578899999999999999998866 6777777888888888888776554432211
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.....+... .....+.+..+.+++.+.+||++||+.||.+|||++++|.||||
T Consensus 232 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 232 PDYKPYPMY--PATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred ccccccCCC--CCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 000000000 00111233456788999999999999999999999999999998
No 76
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.6e-46 Score=387.98 Aligned_cols=259 Identities=30% Similarity=0.448 Sum_probs=229.4
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
..++|.++++||+|+||.+++++++..++.|++|+|...............|+.++++++|||||.++++|...+ .
T Consensus 2 ~m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~----~ 77 (426)
T KOG0589|consen 2 EMDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDG----Q 77 (426)
T ss_pred ccchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCC----c
Confidence 356899999999999999999999999999999999866555556667889999999999999999999995433 3
Q ss_pred cEEEEEecCCc-cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELMES-DLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
.++|||+||+| +|.+.|+... .|+++.++.|+.||+.||.|||+++|+|||||+.|||++.++.|||+|||+|+...
T Consensus 78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 48999999995 9999997644 59999999999999999999999999999999999999999999999999999876
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
... ....+++||+.|+.||+|.+ .+|+.++|||||||++|||++-+++|.+.+....+.+|......|.
T Consensus 158 ~~~---~~a~tvvGTp~YmcPEil~d--~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl------ 226 (426)
T KOG0589|consen 158 PED---SLASTVVGTPYYMCPEILSD--IPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL------ 226 (426)
T ss_pred Cch---hhhheecCCCcccCHHHhCC--CCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC------
Confidence 554 23467999999999999998 7999999999999999999999999999999888888776544333
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
...++.+++.||+.||..+|..||++.++|.+|.+..
T Consensus 227 ------------------------p~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 227 ------------------------PSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred ------------------------CccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 2456888999999999999999999999999988763
No 77
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3.8e-45 Score=382.00 Aligned_cols=262 Identities=29% Similarity=0.468 Sum_probs=216.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++++.||+|+||.||+|++..+|+.||||++..... .......+.+|+.+|+.++|+||+++++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQD-----EEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheec-----CCe
Confidence 479999999999999999999999999999999874321 22345668899999999999999999988843 346
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999997 5999999888889999999999999999999999999999999999999999999999999997654322
Q ss_pred C--------------------------CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC
Q 008607 181 P--------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (560)
Q Consensus 181 ~--------------------------~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~ 234 (560)
. ........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG--TPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcC--CCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 0 0011234679999999999977 57899999999999999999999999887
Q ss_pred ChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHhcC
Q 008607 235 NVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-AEEALAD 313 (560)
Q Consensus 235 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-a~elL~h 313 (560)
+....+..+..... .... .....+++.+.+||.+||. ||.+|++ ++++|+|
T Consensus 234 ~~~~~~~~i~~~~~------------------------~~~~---p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQETYNKIINWKE------------------------SLRF---PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHHHHHHHHhccCC------------------------cccC---CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 75544443332100 0001 1112368999999999998 9999999 9999999
Q ss_pred cccccc
Q 008607 314 PYFKGL 319 (560)
Q Consensus 314 p~f~~~ 319 (560)
|||+++
T Consensus 286 p~~~~~ 291 (350)
T cd05573 286 PFFKGI 291 (350)
T ss_pred CCcCCC
Confidence 999864
No 78
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-45 Score=381.92 Aligned_cols=254 Identities=23% Similarity=0.360 Sum_probs=213.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCC-cEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg-~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
-+.|++.+.||+|+||.||+|.+..++ ..||+|++.... ........+.+|+.+|+.++||||+++++++...
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~----- 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE----- 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC-----
Confidence 467999999999999999999876655 689999986421 2233456788999999999999999999998543
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+||||+. |+|.+++..+..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 46899999997 59999999888999999999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
. ....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 184 ~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~------------ 243 (340)
T PTZ00426 184 R------TYTLCGTPEYIAPEILLN--VGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEG------------ 243 (340)
T ss_pred C------cceecCChhhcCHHHHhC--CCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcC------------
Confidence 1 134689999999999976 57889999999999999999999999887655443333210
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
. . ...+.+++.+.+||++||+.||.+|+ +++++++||||+++
T Consensus 244 --------------~--~---~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 244 --------------I--I---YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred --------------C--C---CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 0 0 11235678899999999999999995 89999999999865
No 79
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.8e-45 Score=386.69 Aligned_cols=262 Identities=24% Similarity=0.364 Sum_probs=212.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||+|+||.||+|++..+++.||||++.... ........+.+|+.+|+.++|+||+++++.+... ..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~-----~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDK-----DN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----CE
Confidence 46999999999999999999999999999999986421 1222345678999999999999999999988543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+|||||+ |+|.+++...+.+++..++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+|.......
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999998 5999999988889999999999999999999999999999999999999999999999999975321000
Q ss_pred C----------------------------------------CcccccccccCcccccccccccccCCCCCccchhhHHHH
Q 008607 181 P----------------------------------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI 220 (560)
Q Consensus 181 ~----------------------------------------~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~i 220 (560)
. ........+||+.|+|||++.+ ..++.++|||||||+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvi 233 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR--TGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC--CCCCcceeeeeccce
Confidence 0 0000123579999999999976 578999999999999
Q ss_pred HHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 008607 221 FAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 300 (560)
Q Consensus 221 l~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~D 300 (560)
+|+|++|+.||.+.+..+....+.... .... ......+++.+.+||.+|+ .|
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~~~~------------------------~~~~---~~~~~~~s~~~~~li~~l~-~~ 285 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVINWE------------------------TTLH---IPSQAKLSREASDLILRLC-CG 285 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHhccC------------------------cccc---CCCCCCCCHHHHHHHHHHh-cC
Confidence 999999999998877554433322100 0000 1112457899999999987 59
Q ss_pred CCCCC---CHHHHhcCcccccc
Q 008607 301 PKDRP---TAEEALADPYFKGL 319 (560)
Q Consensus 301 P~~Rp---ta~elL~hp~f~~~ 319 (560)
|.+|+ |++|+++||||+++
T Consensus 286 p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 286 AEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred HhhcCCCCCHHHHhCCCCcCCC
Confidence 99999 99999999999864
No 80
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.2e-44 Score=373.00 Aligned_cols=321 Identities=48% Similarity=0.866 Sum_probs=263.9
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
+.+.++|++++.||.|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++.+++....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--- 82 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL--- 82 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC---
Confidence 56788999999999999999999999999999999998754444445567889999999999999999999885422
Q ss_pred CccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 99 FKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|+||++++|.+++.. ..+++..+..++.||+.||+|||+.||+||||+|+|||++.++.+||+|||++.....
T Consensus 83 -~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~ 160 (328)
T cd07856 83 -EDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP 160 (328)
T ss_pred -CcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence 35899999999999888764 4689999999999999999999999999999999999999999999999999875322
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
. .....++..|+|||.+.+. ..++.++|||||||++|+|++|++||.+.+.......+.+.+|.+..+.....
T Consensus 161 ~------~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (328)
T cd07856 161 Q------MTGYVSTRYYRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTI 233 (328)
T ss_pred C------cCCCcccccccCceeeecc-CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhc
Confidence 1 1345788899999987542 46889999999999999999999999999988888889999999998888776
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccCCCCCCCCCCcchhhH
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEF 338 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~~~~~~~~~~~~~~~~ 338 (560)
.......++..+....+.+.....+.+++.+.+||++||+.||++|||++++|.||||..+.....++.. ..+++..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~~--~~~~~~~~ 311 (328)
T cd07856 234 CSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPVA--EEKFDWSF 311 (328)
T ss_pred cchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccCc--hhhcCCch
Confidence 6666666666666666666666677889999999999999999999999999999999877655444332 22444444
Q ss_pred HhhcCCHHHHHHHHH
Q 008607 339 ERRRITKEDVRELIY 353 (560)
Q Consensus 339 e~~~~~~e~~~e~i~ 353 (560)
....+..+.++-..|
T Consensus 312 ~~~~~~~~~~~~~~~ 326 (328)
T cd07856 312 NDADLPVDTWKVMMY 326 (328)
T ss_pred hcccCCHHHHHHHhc
Confidence 555555555554443
No 81
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.4e-45 Score=375.84 Aligned_cols=248 Identities=31% Similarity=0.502 Sum_probs=207.5
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||+|+||.||+|++..+++.||+|++.... ........+.+|+.+|+.++||||+++++++... ..+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSP-----EKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecC-----CeEEEEEcCC
Confidence 799999999999999999999999986422 2334456788999999999999999999988433 4689999999
Q ss_pred C-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccc
Q 008607 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD 188 (560)
Q Consensus 110 ~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~ 188 (560)
. ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... ....
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~~~~ 152 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD---KTNT 152 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC---cccc
Confidence 8 59999998888899999999999999999999999999999999999999999999999999975422221 1245
Q ss_pred cccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHH
Q 008607 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLS 268 (560)
Q Consensus 189 ~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~ 268 (560)
.+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~----------------------- 207 (312)
T cd05585 153 FCGTPEYLAPELLLG--HGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ----------------------- 207 (312)
T ss_pred ccCCcccCCHHHHcC--CCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc-----------------------
Confidence 689999999999976 5789999999999999999999999987765443322211
Q ss_pred hhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccccc
Q 008607 269 SMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP---TAEEALADPYFKGL 319 (560)
Q Consensus 269 ~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp---ta~elL~hp~f~~~ 319 (560)
.+. .....+++.+.+||.+||..||.+|| ++.|+|.||||...
T Consensus 208 -----~~~---~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 208 -----EPL---RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred -----CCC---CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 011 11245788999999999999999997 58999999999854
No 82
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2e-44 Score=364.70 Aligned_cols=282 Identities=38% Similarity=0.644 Sum_probs=227.1
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|++.+.||+|++|.||+|.+..++..||||++............+.+|+.+++.++||||+++++++... ..+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQE-----SRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeC-----CeEE
Confidence 48999999999999999999999999999999875433334456778999999999999999999998543 4689
Q ss_pred EEEecCCccHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELMESDLHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~---~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 76 LIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred EEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 99999999998888653 468999999999999999999999999999999999999999999999999987542211
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.......++..|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.+....+.....
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 156 ---RVYTHEVVTLWYRAPEVLLGS-PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred ---ccccCCcccccccChHHhcCC-CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchh
Confidence 112345678999999988652 4578899999999999999999999999888887777777777776555443221
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. ..+..................+++++.+||++||+.||.+|||+.+++.||||
T Consensus 232 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 232 L--PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred h--HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 1 11111111111111222345678999999999999999999999999999998
No 83
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.7e-44 Score=370.94 Aligned_cols=294 Identities=40% Similarity=0.625 Sum_probs=235.1
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
..+.|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++.... ..
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~~ 81 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKH---LD 81 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCC---CC
Confidence 456799999999999999999999999999999998743333333345678999999999999999999885432 24
Q ss_pred cEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+||||++++|.+++... ..+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 82 ~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 82 SIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred eEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 58999999999999888763 56999999999999999999999999999999999999999999999999999865432
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. ......++..|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+++..+...++.+....+....
T Consensus 162 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07845 162 AK---PMTPKVVTLWYRAPELLLGC-TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS 237 (309)
T ss_pred cC---CCCcccccccccChhhhcCC-CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence 21 12344568899999998652 457889999999999999999999999999999999999999888766554332
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
.......+. +.......+...+...++.+.+||.+||++||++|||++|+|+||||++....
T Consensus 238 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 238 DLPLVGKFT-LPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP 299 (309)
T ss_pred ccccccccc-ccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence 211000000 00111111223345568999999999999999999999999999999876554
No 84
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1e-44 Score=376.68 Aligned_cols=250 Identities=24% Similarity=0.452 Sum_probs=208.5
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
++||+|+||.||+|.+..+|+.||||++.... ........+.+|+.+|+.++||||+++++.+... ..+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-----~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTK-----DRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcC-----CEEEEEEe
Confidence 46999999999999999999999999997532 2233456788999999999999999999988443 46899999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
|++ ++|...+.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~---~~ 152 (328)
T cd05593 76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAA---TM 152 (328)
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccc---cc
Confidence 998 58999998888899999999999999999999999999999999999999999999999999875322211 12
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~--------------------- 209 (328)
T cd05593 153 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM--------------------- 209 (328)
T ss_pred ccccCCcCccChhhhcC--CCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhcc---------------------
Confidence 44689999999999976 5789999999999999999999999987665443332211
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
... .....+++.+.+||++||+.||.+|+ ++.|+++||||.+.
T Consensus 210 -------~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 210 -------EDI---KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred -------CCc---cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 000 11235688999999999999999997 89999999999753
No 85
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-44 Score=374.77 Aligned_cols=250 Identities=25% Similarity=0.453 Sum_probs=208.8
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
+.||+|+||.||++.+..+|..||+|++..... .......+.+|+.+|+.++||||+++++.+... ..+|+|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~-----~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH-----DRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecC-----CEEEEEEe
Confidence 469999999999999999999999999875321 223445677899999999999999999988543 46899999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
|++ ++|..++.....+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ..
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~---~~ 152 (323)
T cd05595 76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---TM 152 (323)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC---cc
Confidence 998 58999998888899999999999999999999999999999999999999999999999999875322211 12
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
...+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~--------------------- 209 (323)
T cd05595 153 KTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM--------------------- 209 (323)
T ss_pred ccccCCcCcCCcccccC--CCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhc---------------------
Confidence 44679999999999976 5789999999999999999999999987765544333221
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
.. . .....+++.+.+||++||+.||.+|+ ++.++++||||.+.
T Consensus 210 -----~~--~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 210 -----EE--I---RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred -----CC--C---CCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 00 0 11235688999999999999999998 89999999999864
No 86
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1e-44 Score=376.36 Aligned_cols=262 Identities=23% Similarity=0.400 Sum_probs=214.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|.+..+|+.||||+++.... .......+.+|+.+++.++|+||+.+++++.. ...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-----~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-----KDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec-----CCe
Confidence 469999999999999999999999999999999975322 22344567889999999999999999998843 346
Q ss_pred EEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||++ ++|.+++... +.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 899999997 5999999876 67999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCcccccccccCcccccccccccc----cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSF----FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~----~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
... .....+||+.|+|||++... ...++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--------- 224 (330)
T cd05601 156 KMV--NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNF--------- 224 (330)
T ss_pred Cce--eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcC---------
Confidence 221 12345799999999998631 145788999999999999999999999877655444333221
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.....+ ...+.+++.+.+||++||. ||.+|||++++++||||..+
T Consensus 225 -----------------~~~~~~-~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 225 -----------------QRFLKF-PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred -----------------CCccCC-CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 001111 1224578999999999998 99999999999999999854
No 87
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=371.16 Aligned_cols=259 Identities=28% Similarity=0.488 Sum_probs=225.2
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+..-|.+.+.||+|-|.+|.+|+|.-||++||||+|.+.-.+.-....+..|+..|+.++|||||++|+++-+. .
T Consensus 16 IAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQ-----T 90 (864)
T KOG4717|consen 16 IAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQ-----T 90 (864)
T ss_pred eeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhccc-----c
Confidence 45679999999999999999999999999999999987655555567789999999999999999999998443 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCee-eCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL-ANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NIL-l~~~~~lKL~DFGla~~~~ 177 (560)
.+|||+|+-+ |||+++|.++. .++|+.+++||.||+.|+.|||..+++||||||+||. +..-|-|||.|||++....
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 6999999998 59999998865 6999999999999999999999999999999999986 5566999999999986654
Q ss_pred CCCCCcccccccccCcccccccccccccCCCC-CccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYT-PAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~-~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.+. .+++.||+..|-|||+|.+ ..|+ +++||||||||||-|++|++||...|..+.+-+|.+---
T Consensus 171 PG~----kL~TsCGSLAYSAPEILLG--DsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY-------- 236 (864)
T KOG4717|consen 171 PGK----KLTTSCGSLAYSAPEILLG--DSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY-------- 236 (864)
T ss_pred Ccc----hhhcccchhhccCchhhhc--CccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--------
Confidence 433 3578899999999999987 4565 789999999999999999999999998888877765211
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.....++.+++|||..||..||++|.+.+||..|+|++....
T Consensus 237 -----------------------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 237 -----------------------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred -----------------------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 122356889999999999999999999999999999997654
No 88
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.1e-44 Score=369.50 Aligned_cols=281 Identities=35% Similarity=0.599 Sum_probs=214.5
Q ss_pred EEEEeecCCeEEEEEEECC--CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 28 EEVIGKGSYGVVCSAYDTR--TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~--tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
..+||+|+||.||+|.+.. ++..||+|.+... .....+.+|+.+|+.++||||+++++++.... ...+|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT----GISMSACREIALLRELKHPNVIALQKVFLSHS---DRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCC----CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccC---CCeEEEE
Confidence 3679999999999999654 6689999998642 22345678999999999999999999886432 2468999
Q ss_pred EecCCccHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeee----CCCCcEEEecccc
Q 008607 106 FELMESDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA----NADCKLKICDFGL 172 (560)
Q Consensus 106 ~E~~~gdL~~~i~~~---------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl----~~~~~lKL~DFGl 172 (560)
|||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 999999998888532 248899999999999999999999999999999999999 5667899999999
Q ss_pred cccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCCh---------hhHHHHH
Q 008607 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---------VHQLDIM 243 (560)
Q Consensus 173 a~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~---------~~~~~~i 243 (560)
++...............++|+.|+|||++.+. ..++.++|||||||++|||++|++||.+... ..++..+
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 237 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRI 237 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCC-CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHH
Confidence 98654333222223456889999999998652 4578999999999999999999999976432 3567778
Q ss_pred HHhcCCCCHHHHHHhhhHH-HHHHHHhhccCC-----C-CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 244 TDLLGTPSPEAIARVRNEK-ARRYLSSMRKKK-----P-IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 244 ~~~~g~p~~~~~~~~~~~~-~~~~l~~~~~~~-----~-~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...+|.+..+.+..+.... ............ . ..........+..+.+||.+||+.||.+|||++|+|+||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 238 FSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 8888888777665543211 000000000000 0 00111122346779999999999999999999999999998
No 89
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-45 Score=357.60 Aligned_cols=279 Identities=32% Similarity=0.492 Sum_probs=226.2
Q ss_pred cCCCcccccccCCCCceEEE-EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccc
Q 008607 9 SSADVDFFTEYGEGSRYKIE-EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVE 86 (560)
Q Consensus 9 ~~~~~~~~~~~~~~~~Y~i~-~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~ 86 (560)
+..+++| .++.+.+.|+|. ++||-|-.|.|..+.++.||+++|+|++.+ .....||+++--.. .|||||.
T Consensus 48 ~~~~m~~-k~~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~ 119 (400)
T KOG0604|consen 48 EESDMDF-KEYSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVS 119 (400)
T ss_pred hhhhcch-hcccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEE
Confidence 3556666 889999999886 679999999999999999999999999853 34556888886555 5999999
Q ss_pred cceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC--
Q 008607 87 IKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-- 161 (560)
Q Consensus 87 l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~--lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-- 161 (560)
++++|. ++......+.||||.|+| +|+..|..++. |+|.++..|+.||..|+.|||+.+|.||||||+|+|...
T Consensus 120 IidVye-Ns~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~ 198 (400)
T KOG0604|consen 120 IIDVYE-NSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS 198 (400)
T ss_pred eehhhh-hhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC
Confidence 999984 344556788999999995 99999998775 999999999999999999999999999999999999875
Q ss_pred -CCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHH
Q 008607 162 -DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQL 240 (560)
Q Consensus 162 -~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~ 240 (560)
|..+||+|||+|+.... ...+.+-|.|++|.|||+++. .+|+...|+||+|||+|.||+|.+||..+.....
T Consensus 199 ~na~lKLtDfGFAK~t~~----~~~L~TPc~TPyYvaPevlg~--eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai- 271 (400)
T KOG0604|consen 199 PNAPLKLTDFGFAKETQE----PGDLMTPCFTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI- 271 (400)
T ss_pred CCcceEecccccccccCC----CccccCCcccccccCHHHhCc--hhcCCCCCccchhHHHHHhhcCCCcccccCCccC-
Confidence 56799999999986432 233466789999999999987 6899999999999999999999999987653211
Q ss_pred HHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 241 ~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
++..-.++ +....-.....|..+|..++|||++||..+|.+|.|++|++.|||+.+..
T Consensus 272 ----------spgMk~rI------------~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 272 ----------SPGMKRRI------------RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYE 329 (400)
T ss_pred ----------ChhHHhHh------------hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccc
Confidence 11110111 11111122345667889999999999999999999999999999998766
Q ss_pred ccCCC
Q 008607 321 KVERE 325 (560)
Q Consensus 321 ~~~~~ 325 (560)
.....
T Consensus 330 ~vp~t 334 (400)
T KOG0604|consen 330 AVPQT 334 (400)
T ss_pred cCCCC
Confidence 54443
No 90
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.4e-44 Score=379.13 Aligned_cols=263 Identities=24% Similarity=0.370 Sum_probs=214.1
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..++|++.+.||+|+||.||+|.+..+++.||+|++.+.. ........+.+|+.+++.++||||+.+++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~----- 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDD----- 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecC-----
Confidence 3468999999999999999999999999999999986421 2223345577899999999999999999988443
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|||||+ |+|.+++... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 46999999998 5899888654 689999999999999999999999999999999999999999999999999976532
Q ss_pred CCCCcccccccccCcccccccccccc--cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~--~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... ......+||+.|+|||++.+. ...++.++|||||||++|||++|+.||.+.+....+..|...
T Consensus 195 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~---------- 262 (370)
T cd05596 195 NGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDH---------- 262 (370)
T ss_pred CCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcC----------
Confidence 211 112456899999999998642 124788999999999999999999999987765544443221
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD--RPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~--Rpta~elL~hp~f~~ 318 (560)
.....+ .....++..+.+||++||+.+|.+ |+|++|+++||||++
T Consensus 263 ----------------~~~~~~-~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 263 ----------------KNSLTF-PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred ----------------CCcCCC-CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 111111 122357899999999999999988 999999999999985
No 91
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=3e-44 Score=373.21 Aligned_cols=260 Identities=23% Similarity=0.396 Sum_probs=208.2
Q ss_pred ceEEEEEEeecCCeEEEEEEEC---CCCcEEEEEEecCcc--cChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRR 97 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~---~tg~~vAiK~i~~~~--~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~ 97 (560)
.|++++.||+|+||.||+|++. .+++.||+|++.+.. ........+.+|+.+|+.++ |+||+.+++++...
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~--- 77 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTE--- 77 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecC---
Confidence 4899999999999999999864 578999999986421 22234456788999999995 89999999888433
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+||||+. ++|.+++.....++++.++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 78 --~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 78 --AKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred --CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 46899999998 599999988888999999999999999999999999999999999999999999999999999764
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... .....+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||...........+..
T Consensus 156 ~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~----------- 221 (332)
T cd05614 156 LSEEKE--RTYSFCGTIEYMAPEIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSR----------- 221 (332)
T ss_pred cccCCC--ccccccCCccccCHHHhcCC-CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHH-----------
Confidence 332221 12346899999999998752 3578899999999999999999999975432211111110
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~ 318 (560)
.+.... ......+++.+.+||.+||+.||++|| +++++++||||++
T Consensus 222 ------------~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 222 ------------RILKCD----PPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred ------------HHhcCC----CCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 000111 111235788999999999999999999 8999999999985
No 92
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.7e-44 Score=371.52 Aligned_cols=255 Identities=24% Similarity=0.410 Sum_probs=211.4
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCC-CccccceeecCCCcCCCcc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHP-DIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~Hp-nIv~l~~i~~~~~~~~~~~ 101 (560)
.|++++.||+|+||.||+|.+..+++.||||++.... ........+..|+.+++.+.|+ +|+.+++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM-----DR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcC-----CE
Confidence 4899999999999999999999999999999987432 1233456778899999999765 577888877433 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 899999998 5999999888889999999999999999999999999999999999999999999999999987532211
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 156 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~-------------- 216 (324)
T cd05587 156 K---TTRTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH-------------- 216 (324)
T ss_pred C---ceeeecCCccccChhhhcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Confidence 1 1234679999999999976 57889999999999999999999999887765544433221
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA-----EEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta-----~elL~hp~f~~~ 319 (560)
. . .....++..+.+||.+||..||.+|++. +++++||||+..
T Consensus 217 ------------~--~---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 217 ------------N--V---SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred ------------C--C---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 0 0 1123568899999999999999999976 899999999864
No 93
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=9.2e-44 Score=369.82 Aligned_cols=279 Identities=25% Similarity=0.390 Sum_probs=217.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|++.+.||+|+||.||++++..+|..||+|.+.... ......++.+|+++|+.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 77 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GE 77 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----CE
Confidence 468999999999999999999999999999999987432 233456789999999999999999999998543 46
Q ss_pred EEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+++||||+++ +|.+++.....+++..++.++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 78 ISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred EEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 8999999985 9999998888899999999999999999999986 6999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH----
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI---- 255 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~---- 255 (560)
. ....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+.... ++.+.....
T Consensus 158 ~-----~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~~ 226 (331)
T cd06649 158 M-----ANSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAI----FGRPVVDGEEGEP 226 (331)
T ss_pred c-----cccCCCCcCcCCHhHhcC--CCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----hcccccccccCCc
Confidence 1 234679999999999976 5789999999999999999999999987665433222 221110000
Q ss_pred -------------------HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 256 -------------------ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 256 -------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...........+..+........ ....+++.+.+||.+||++||++|||++|+|+||||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 227 HSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKL--PNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred cccCcccccccccccccccccccchhHHHHHHHHHhCCCcCC--CCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 00000001111111111111111 113467899999999999999999999999999999
Q ss_pred ccc
Q 008607 317 KGL 319 (560)
Q Consensus 317 ~~~ 319 (560)
+..
T Consensus 305 ~~~ 307 (331)
T cd06649 305 KRS 307 (331)
T ss_pred hhc
Confidence 853
No 94
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.5e-44 Score=372.49 Aligned_cols=250 Identities=24% Similarity=0.434 Sum_probs=208.2
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||.||+|.++.+++.||||++.... ........+.+|+.++..+ +||||+++++++... ..+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~-----~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTP-----DRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcC-----CEEEEEE
Confidence 46999999999999999999999999987432 2223455677899999876 699999999988443 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||++ ++|..++.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~---~ 152 (320)
T cd05590 76 EFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK---T 152 (320)
T ss_pred cCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC---c
Confidence 9998 59999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~------------------- 211 (320)
T cd05590 153 TSTFCGTPDYIAPEILQE--MLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILND------------------- 211 (320)
T ss_pred ccccccCccccCHHHHcC--CCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC-------------------
Confidence 244679999999999976 57889999999999999999999999987765544433210
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH------HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA------EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta------~elL~hp~f~~~ 319 (560)
. . .....+++.+.+||++||+.||.+|+++ +++++||||..+
T Consensus 212 --------~-~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 212 --------E-V---VYPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred --------C-C---CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 0 0 1123468899999999999999999998 999999999865
No 95
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-45 Score=369.83 Aligned_cols=281 Identities=32% Similarity=0.570 Sum_probs=225.7
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCC--C----ccccceeecCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHP--D----IVEIKHILLPP 94 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hp--n----Iv~l~~i~~~~ 94 (560)
..+||+++..+|+|.||.|..+.|..++..||||+|+.. .......+-|+++|.+|.+. + +|.+.++|
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF--- 160 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF--- 160 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh---
Confidence 378999999999999999999999999999999999742 12334455699999999532 2 45554544
Q ss_pred CcCCCccEEEEEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-----------
Q 008607 95 SRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA----------- 161 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~----------- 161 (560)
+-.++++||+|.++-++++++++|+ .++.++++.+.+||+.+++|||+++|+|.||||+|||+.+
T Consensus 161 --dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 161 --DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred --hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCC
Confidence 3446799999999999999999876 5899999999999999999999999999999999999643
Q ss_pred ---------CCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCC
Q 008607 162 ---------DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (560)
Q Consensus 162 ---------~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~ 232 (560)
+..|||+|||.|+...... +..+.|+.|+|||++.+ -+++..+||||+||||+||.+|..+|.
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~e~h------s~iVsTRHYRAPEViLg--LGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDHEHH------STIVSTRHYRAPEVILG--LGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred ccceeccCCCcceEEEecCCcceeccCc------ceeeeccccCCchheec--cCcCCccCceeeeeEEEEeeccceecc
Confidence 2348999999997643322 56789999999999998 589999999999999999999999999
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccC---------------CCCCCCCCCCCCC---HHHHHHHH
Q 008607 233 GKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKK---------------KPIPFSQKFPNAN---PLALRLLE 294 (560)
Q Consensus 233 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~---------------~~~~~~~~~~~~s---~~~~dLI~ 294 (560)
+.+..+.+..|..++|..+...+.+.+ ..+|+...+-. .+.++.......+ ..+.|||+
T Consensus 311 tHen~EHLaMMerIlGp~P~~mi~r~~---~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~ 387 (415)
T KOG0671|consen 311 THENLEHLAMMERILGPIPSRMIKKTR---KEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLR 387 (415)
T ss_pred cCCcHHHHHHHHHhhCCCcHHHhhhhh---hHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHH
Confidence 999999999999999977776666654 33343332100 0111111111112 34889999
Q ss_pred HhcccCCCCCCCHHHHhcCccccccc
Q 008607 295 RMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 295 ~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
+||.+||.+|+|+.|+|.||||+.+.
T Consensus 388 ~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 388 RMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred HHHccCccccccHHHHhcCHHhhcCC
Confidence 99999999999999999999998753
No 96
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.3e-44 Score=371.06 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=207.7
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHH---HhcCCCCccccceeecCCCcCCCc
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLL---RLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL---~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
|++++.||+|+||.||+|.+..+|+.||||++.... ........+.+|+.++ +.++||||+++++++... .
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~-----~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTE-----D 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcC-----C
Confidence 789999999999999999999999999999997432 1223345677777765 456799999999988443 4
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+||||+++ +|...+.. +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 68999999985 88877754 47999999999999999999999999999999999999999999999999998653221
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 155 ~---~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~------------- 216 (324)
T cd05589 155 G---DRTSTFCGTPEFLAPEVLTE--TSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVND------------- 216 (324)
T ss_pred C---CcccccccCccccCHhHhcC--CCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-------------
Confidence 1 11245689999999999976 57889999999999999999999999887765544433210
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
.. .....+++.+.+||.+||+.||.+|| +++++++||||+++
T Consensus 217 --------------~~----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 217 --------------EV----RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred --------------CC----CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 00 11235688999999999999999999 79999999999864
No 97
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.1e-44 Score=373.62 Aligned_cols=250 Identities=26% Similarity=0.461 Sum_probs=207.8
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
+.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+++++.++||||+.+++.+... ..+|+|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~-----~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH-----DRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcC-----CEEEEEEe
Confidence 46999999999999999999999999997532 2233456678899999999999999999988443 46899999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
|++ ++|..++.....+++..++.++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---~ 152 (325)
T cd05594 76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA---T 152 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc---c
Confidence 998 5899998888889999999999999999999997 7999999999999999999999999999875322211 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~-------------------- 210 (325)
T cd05594 153 MKTFCGTPEYLAPEVLED--NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM-------------------- 210 (325)
T ss_pred cccccCCcccCCHHHHcc--CCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhc--------------------
Confidence 244679999999999976 5789999999999999999999999987765443332211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
... .....+++.+.+||++||+.||.+|+ ++.++|+||||.+.
T Consensus 211 --------~~~---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 211 --------EEI---RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred --------CCC---CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 000 11135688999999999999999997 99999999999864
No 98
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3e-44 Score=377.78 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=213.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||+|+||.||+|.+..+++.||||++.... ........+.+|+.+|..++|+||+++++.+.. ...
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-----~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQD-----KRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 36999999999999999999999999999999986422 122345677889999999999999999998843 346
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+|||||. |+|.+++...+.+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 999999998 5999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CC--------------------------------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCC
Q 008607 181 PT--------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (560)
Q Consensus 181 ~~--------------------------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~ 228 (560)
.. .......+||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~--~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQ--TGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcC--CCCCCcceeccccceeeecccCC
Confidence 00 000124579999999999976 67899999999999999999999
Q ss_pred CCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---
Q 008607 229 PLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP--- 305 (560)
Q Consensus 229 ~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp--- 305 (560)
+||.+.+....+..+... .....+.. ...+++.+++||.+|+. ||.+|+
T Consensus 234 ~Pf~~~~~~~~~~~i~~~--------------------------~~~~~~p~-~~~~s~~~~~li~~l~~-~p~~R~~~~ 285 (360)
T cd05627 234 PPFCSETPQETYRKVMNW--------------------------KETLVFPP-EVPISEKAKDLILRFCT-DSENRIGSN 285 (360)
T ss_pred CCCCCCCHHHHHHHHHcC--------------------------CCceecCC-CCCCCHHHHHHHHHhcc-ChhhcCCCC
Confidence 999887765544433211 00111111 12368899999999875 999998
Q ss_pred CHHHHhcCcccccc
Q 008607 306 TAEEALADPYFKGL 319 (560)
Q Consensus 306 ta~elL~hp~f~~~ 319 (560)
+++|+++||||+++
T Consensus 286 ~~~ei~~hp~f~~~ 299 (360)
T cd05627 286 GVEEIKSHPFFEGV 299 (360)
T ss_pred CHHHHhcCCCCCCC
Confidence 58999999999875
No 99
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.2e-43 Score=359.05 Aligned_cols=282 Identities=39% Similarity=0.645 Sum_probs=228.0
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|++++.||.|++|.||+|++..+|..||||++............+.+|+++++.++||||+++++++.. ....|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhccc-----CCcEE
Confidence 3899999999999999999999999999999987543333344578899999999999999999998743 34689
Q ss_pred EEEecCCccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 104 VVFELMESDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
+||||+.++|..++.. ...+++..++.++.||+.||+|||+.||+||||+|+||+++.++.+||+|||++........
T Consensus 76 ~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 76 LVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred EEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 9999999899998865 34689999999999999999999999999999999999999999999999999875432211
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+...++.+....+......
T Consensus 156 ---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 156 ---TYTHEVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred ---ccccccccccccCCeEEecC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence 12344678899999988652 34678899999999999999999999999888888888888888876544332221
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..+...+.......+....+.+++.+.+||.+||+.||.+|||++++|.||||
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 232 --PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred --HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 11111222222222333345678899999999999999999999999999998
No 100
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.1e-43 Score=359.11 Aligned_cols=285 Identities=42% Similarity=0.731 Sum_probs=233.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++.. ...+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH-----GSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec-----CCeeE
Confidence 5999999999999999999999999999999987544334445678899999999999999999999854 34689
Q ss_pred EEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+|+||++++|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++........
T Consensus 76 ~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 76 LVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred EEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9999997799999865 45699999999999999999999999999999999999999999999999999986543321
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
.......++.+|+|||.+.+. ..++.++|||||||++|+|++|.++|.+.+....+..+...++.|....+.......
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGA-RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred -CccccccCcccccCceeeecc-ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 112445789999999998652 456889999999999999999999999999888888888888888776554432211
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
....+ .........+...+++.+..+.+||++||..||.+|||++++|+||||.
T Consensus 233 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 233 DYNKI-TFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred hhhcc-cCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence 00000 0111222233445567789999999999999999999999999999984
No 101
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.7e-44 Score=370.29 Aligned_cols=250 Identities=25% Similarity=0.417 Sum_probs=208.6
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++||+|+||.||+|.+..+++.||||++.... ........+..|..++..+ +||||+.+++++... ..+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTK-----DRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CeEEEEE
Confidence 46999999999999999999999999987432 2233445677899999866 799999999998543 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||++ ++|...+.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~---~ 152 (321)
T cd05591 76 EYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV---T 152 (321)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc---c
Confidence 9998 59999998888899999999999999999999999999999999999999999999999999875432221 2
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~------------------- 211 (321)
T cd05591 153 TTTFCGTPDYIAPEILQE--LEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHD------------------- 211 (321)
T ss_pred ccccccCccccCHHHHcC--CCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcC-------------------
Confidence 245679999999999976 57899999999999999999999999988766555443220
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-------CHHHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-------TAEEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-------ta~elL~hp~f~~~ 319 (560)
.. .....++..+.+||.+||+.||++|+ +++++++||||..+
T Consensus 212 --------~~----~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 212 --------DV----LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred --------CC----CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 00 01124678999999999999999999 99999999999753
No 102
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=6.3e-44 Score=377.14 Aligned_cols=262 Identities=25% Similarity=0.386 Sum_probs=211.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.++|++.+.||+|+||.||+|.+..+++.||+|++.+. .........+.+|+.+++.++||||+++++++... .
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~-----~ 116 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDD-----K 116 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-----C
Confidence 46899999999999999999999999999999998642 12223445678999999999999999999988543 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+|||||+ |+|.+++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~ 195 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET 195 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence 6999999998 5999988654 6899999999999999999999999999999999999999999999999999765322
Q ss_pred CCCcccccccccCccccccccccccc--CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~--~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
. .......+||+.|+|||++.+.. ..++.++|||||||++|+|++|+.||.+.+....+..|....
T Consensus 196 ~--~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~---------- 263 (370)
T cd05621 196 G--MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK---------- 263 (370)
T ss_pred C--ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCC----------
Confidence 1 11224568999999999986521 237889999999999999999999999877655544433211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD--RPTAEEALADPYFKG 318 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~--Rpta~elL~hp~f~~ 318 (560)
....+. ....++..+++||.+||..++.+ |+|++|+++||||+.
T Consensus 264 ----------------~~~~~p-~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 264 ----------------NSLNFP-EDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred ----------------cccCCC-CcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 011111 11356889999999999865543 899999999999975
No 103
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.2e-43 Score=368.97 Aligned_cols=264 Identities=23% Similarity=0.416 Sum_probs=212.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||++++..+++.||||++.+. .........+.+|+.++..++|+||+.+++++... ..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDE-----NN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecC-----Ce
Confidence 4799999999999999999999999999999998642 12223445678899999999999999999988433 46
Q ss_pred EEEEEecCC-ccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||+. ++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 999999997 599999976 457999999999999999999999999999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... .....+||+.|+|||++... ...++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~---------- 223 (331)
T cd05597 156 GTV--QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH---------- 223 (331)
T ss_pred CCc--cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcC----------
Confidence 211 11235799999999998531 135788999999999999999999999887765554433211
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD--RPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~--Rpta~elL~hp~f~~~ 319 (560)
.....+....+.++..+++||++||..++++ |++++++|+||||.++
T Consensus 224 ----------------~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 224 ----------------KEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred ----------------CCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 1111223334557899999999999765544 7899999999999764
No 104
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=6.9e-44 Score=369.51 Aligned_cols=251 Identities=28% Similarity=0.484 Sum_probs=207.4
Q ss_pred EEEEeecCCeEEEEEEEC---CCCcEEEEEEecCcc--cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 28 EEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~---~tg~~vAiK~i~~~~--~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++.||+|+||.||+|++. .+++.||||++.... ........+.+|+.+|+.++||||+++++++... ..+
T Consensus 1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~-----~~~ 75 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTG-----GKL 75 (323)
T ss_pred CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecC-----CeE
Confidence 368999999999999864 578899999987421 1223345677899999999999999999988543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+.+ +|.+++...+.++++.++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 76 YLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred EEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 999999985 9999998888899999999999999999999999999999999999999999999999999875322221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....+..+..
T Consensus 156 ---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~---------------- 214 (323)
T cd05584 156 ---VTHTFCGTIEYMAPEILMR--SGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILK---------------- 214 (323)
T ss_pred ---cccccCCCccccChhhccC--CCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHc----------------
Confidence 1234679999999999976 5688999999999999999999999988765444333221
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
.. ....+.+++.+.+||++||+.||.+|| +++++++||||...
T Consensus 215 ----------~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 215 ----------GK-----LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred ----------CC-----CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 00 112245688999999999999999999 89999999999853
No 105
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.2e-43 Score=368.60 Aligned_cols=300 Identities=42% Similarity=0.681 Sum_probs=231.7
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC-
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR- 97 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~- 97 (560)
|..+.+|++.+.||.|+||.||+|++..+|+.||+|++... .......+.+|+.+|+.++||||+++++++......
T Consensus 1 ~~~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~--~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (342)
T cd07854 1 FDLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL 78 (342)
T ss_pred CCcCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecC--CCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccc
Confidence 45678999999999999999999999999999999998643 223456688999999999999999999877543211
Q ss_pred --------CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEEe
Q 008607 98 --------EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKIC 168 (560)
Q Consensus 98 --------~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL~ 168 (560)
+...+|+||||++++|.+++.. +.+++..++.++.||+.||.|||+.||+||||||+|||++. ++.+||+
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 79 TEDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEEC
Confidence 1246899999999999888864 46999999999999999999999999999999999999985 5678999
Q ss_pred cccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcC
Q 008607 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 169 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g 248 (560)
|||+++...............+++..|+|||.+.+. ..++.++|||||||++|+|++|+.||.+.+....+..+.+...
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~ 236 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVP 236 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCc-cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999997653222211222334688999999987542 4678899999999999999999999999888777777666555
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccccC
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVE 323 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~~ 323 (560)
.+..+......+... ..+.........++....+..+..+.+||.+||+.||.+|||++|+|.||||+.+..+.
T Consensus 237 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~~~~ 310 (342)
T cd07854 237 VVREEDRNELLNVIP-SFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYSCPF 310 (342)
T ss_pred CCChHHhhhhhhhhh-hhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccccccCCc
Confidence 544433332221111 11111111222223334567889999999999999999999999999999999765443
No 106
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-43 Score=367.70 Aligned_cols=255 Identities=23% Similarity=0.396 Sum_probs=211.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.|++.+.||+|+||.||+|++..+++.||||++.+... .......+..|..++..+. |++|+.+++++... ..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTM-----DR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecC-----CE
Confidence 48999999999999999999999999999999875321 2233456778888888774 78899998888433 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||++ |+|.+.+...+.+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 899999998 5999999888889999999999999999999999999999999999999999999999999987532211
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 156 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~-------------- 216 (323)
T cd05616 156 V---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-------------- 216 (323)
T ss_pred C---ccccCCCChhhcCHHHhcC--CCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 1 1245679999999999976 57899999999999999999999999987765554443321
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~ 319 (560)
. . .....++..+.+||.+||+.||.+|++ ..++++||||+.+
T Consensus 217 ------------~--~---~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 217 ------------N--V---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred ------------C--C---CCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 0 0 111356889999999999999999997 4899999999854
No 107
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.3e-44 Score=369.68 Aligned_cols=250 Identities=27% Similarity=0.472 Sum_probs=205.5
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~-iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++||+|+||+||+|++..+|+.||||++.... ........+.+|.. +++.++||||+++++.+... ..+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~-----~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTA-----DKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeC-----CEEEEEE
Confidence 46999999999999999999999999986422 12233445666655 46789999999999988443 4689999
Q ss_pred ecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+.+ +|..++..++.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (323)
T cd05575 76 DYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK---T 152 (323)
T ss_pred cCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC---c
Confidence 99984 8999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~-------------------- 210 (323)
T cd05575 153 TSTFCGTPEYLAPEVLRK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN-------------------- 210 (323)
T ss_pred cccccCChhhcChhhhcC--CCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc--------------------
Confidence 245679999999999976 5789999999999999999999999988775544333321
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA----EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta----~elL~hp~f~~~ 319 (560)
. + ....+..++.+.+||++||+.||.+||++ .++++||||...
T Consensus 211 -------~-~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 211 -------K-P---LRLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred -------C-C---CCCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 0 0 11234668999999999999999999987 699999999753
No 108
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.8e-43 Score=359.80 Aligned_cols=288 Identities=37% Similarity=0.633 Sum_probs=229.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++ |+||+++++++..........
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 4699999999999999999999999999999998754333334456788999999995 699999999886554333345
Q ss_pred EEEEEecCCccHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEEeccccccc
Q 008607 102 IYVVFELMESDLHQVIKAN-----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARV 175 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~~-----~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL~DFGla~~ 175 (560)
+|+||||++++|.+++... ..+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|||+++.
T Consensus 81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~ 160 (295)
T cd07837 81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRA 160 (295)
T ss_pred EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeeccccee
Confidence 8999999999999988653 35899999999999999999999999999999999999999 89999999999875
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ......++++|+|||.+.+. ..++.++|||||||++|+|++|..||.+.+....+..+...++.|....+
T Consensus 161 ~~~~~~---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 161 FSIPVK---SYTHEIVTLWYRAPEVLLGS-THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW 236 (295)
T ss_pred cCCCcc---ccCCcccccCCCChHHhhCC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence 422111 11334678899999988542 45789999999999999999999999999888888888888887776554
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
.......... ......+.......+.+++.+.+||.+||..||.+||+++|+|.||||+
T Consensus 237 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 237 PGVSKLRDWH---EFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred cchhhccchh---hcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 3322211100 0111112222333457889999999999999999999999999999985
No 109
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.9e-43 Score=360.50 Aligned_cols=286 Identities=42% Similarity=0.678 Sum_probs=232.5
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC---hhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~---~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+|++.+.||+|+||.||+|.+..+|+.||||++...... ......+.+|+.+++.++|+||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH-----KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-----CC
Confidence 589999999999999999999999999999999753322 2234556789999999999999999999854 34
Q ss_pred cEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+||||+.++|.+++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++.....
T Consensus 76 ~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 76 NINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred EEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 689999999889999998776 7999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. ......+++.|+|||.+.+. ..++.++|||||||++|+|++|.++|.+.+..+.+..+...++.|....+....
T Consensus 156 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 156 NR---KMTHQVVTRWYRAPELLFGA-RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVT 231 (298)
T ss_pred Cc---cccccccceeeeCHHHHhCC-CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcc
Confidence 21 12334678899999988542 467889999999999999999999999988888888888877777665543322
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
... .+. ........+....+...+..+.+||.+||.+||++|||+.|+|.|+||++...
T Consensus 232 ~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~ 290 (298)
T cd07841 232 SLP--DYV-EFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPA 290 (298)
T ss_pred ccc--ccc-cccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCC
Confidence 111 111 11112223334455677889999999999999999999999999999997654
No 110
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=9.5e-44 Score=367.47 Aligned_cols=250 Identities=24% Similarity=0.410 Sum_probs=205.4
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++||+|+||.||+|.++.+|+.||+|++..... .......+..|..++..+ +||||+.+++++.. ...+|+||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT-----KEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-----CCEEEEEE
Confidence 479999999999999999999999999975321 123445667788888754 89999999998843 34699999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+. ++|..++...+.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 76 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~ 152 (316)
T cd05620 76 EFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---NR 152 (316)
T ss_pred CCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC---Cc
Confidence 9998 5999999888889999999999999999999999999999999999999999999999999987432211 12
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~-------------------- 210 (316)
T cd05620 153 ASTFCGTPDYIAPEILQG--LKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRV-------------------- 210 (316)
T ss_pred eeccCCCcCccCHHHHcC--CCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh--------------------
Confidence 245689999999999976 5789999999999999999999999988765443332211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA-EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta-~elL~hp~f~~~ 319 (560)
.. ......++..+.+||++||+.||.+|+++ +++++||||+..
T Consensus 211 -------~~----~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 211 -------DT----PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred -------CC----CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 00 01112468899999999999999999997 588899999864
No 111
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=6e-44 Score=355.38 Aligned_cols=258 Identities=36% Similarity=0.606 Sum_probs=212.9
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|++++.||+|+||+||++.+..+++.||+|++..............+|+.+++.++|+||+++++++.. ...+++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 899999999999999999999999999999998643333333445679999999999999999999855 346899
Q ss_pred EEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 105 VFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 105 V~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
|||++.+ +|.+++.....+++..++.++.||+.||++||+.||+|+||||+|||++.++.++|+|||++.... ...
T Consensus 76 v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~---~~~ 152 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS---ENN 152 (260)
T ss_dssp EEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST---STT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccc
Confidence 9999997 999999977789999999999999999999999999999999999999999999999999987541 111
Q ss_pred ccccccccCcccccccccc-cccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 184 IFWTDYVATRWYRAPELCG-SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~-~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
.......++..|+|||++. + ..++.++|||||||++|+|++|..||...+..+....+.+.......
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------- 220 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQG--KKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLP---------- 220 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTT--SSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHH----------
T ss_pred ccccccccccccccccccccc--ccccccccccccccccccccccccccccccchhhhhhhhhccccccc----------
Confidence 2335678999999999987 4 57889999999999999999999999987555555444432211110
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.... ........+.+||++||+.||++||++.++++||||
T Consensus 221 -----~~~~---------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 221 -----SSSQ---------QSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp -----HHTT---------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred -----cccc---------ccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0000 001113789999999999999999999999999998
No 112
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2e-43 Score=357.31 Aligned_cols=282 Identities=38% Similarity=0.698 Sum_probs=219.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|+||+++++++... ..+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRK-----RKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeC-----CEE
Confidence 479999999999999999999999999999999864322223345678999999999999999999988443 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++ .|..++.....+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred EEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999999997 4555555566799999999999999999999999999999999999999999999999999986533221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++.+|+|||.+.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++............
T Consensus 156 ---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (286)
T cd07847 156 ---DYTDYVATRWYRAPELLVGD-TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFST- 230 (286)
T ss_pred ---cccCcccccccCCHHHHhCC-CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccc-
Confidence 12345688999999998652 4578899999999999999999999999887777766666555433221111000
Q ss_pred HHHHHHHhhccCCC---CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKP---IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~---~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..+...+....+ .+....++.++..+.+||.+||+.||++|||+.|+|.||||
T Consensus 231 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 231 --NQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred --ccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 001111100000 11122345678899999999999999999999999999998
No 113
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3e-43 Score=360.12 Aligned_cols=296 Identities=34% Similarity=0.547 Sum_probs=228.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc--
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-- 96 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-- 96 (560)
...-++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 8 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (310)
T cd07865 8 CDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPY 87 (310)
T ss_pred cchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccc
Confidence 344567999999999999999999999999999999986433333334456789999999999999999998865432
Q ss_pred -CCCccEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 97 -REFKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 97 -~~~~~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.....+|+||||++++|.+++.... .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.
T Consensus 88 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~ 167 (310)
T cd07865 88 NRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLAR 167 (310)
T ss_pred cCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcc
Confidence 1234679999999999998887654 68999999999999999999999999999999999999999999999999997
Q ss_pred cccCCCCC-cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 175 VAFNDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 175 ~~~~~~~~-~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
........ .......+++..|+|||++.+. ..++.++|||||||++|+|++|++||.+.+...++..+..+.|....+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 168 AFSLSKNSKPNRYTNRVVTLWYRPPELLLGE-RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred cccCCcccCCCCccCcccCccccCcHHhcCC-cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 65332211 1112345678999999988552 347889999999999999999999999999888888888888876665
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCC--CCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQ--KFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.+...........+. +.......... .....+..+.+||.+||..||.+|||++|+|+||||
T Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 247 VWPGVDKLELFKKME-LPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hcccccchhhhhhcc-CCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 443332111111100 00000000000 011236778999999999999999999999999998
No 114
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-43 Score=378.22 Aligned_cols=281 Identities=23% Similarity=0.294 Sum_probs=217.5
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC--CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~--~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..+|++++.||+|+||.||+|... .++..||+|.+... ....+|+++|+.++||||+++++++.. .
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~-----~ 158 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW-----K 158 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee-----C
Confidence 357999999999999999999754 45688999987531 234589999999999999999998843 3
Q ss_pred ccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..+|+|||++.++|.+++...+.+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 159 ~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 159 STVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred CEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 46899999999999999987788999999999999999999999999999999999999999999999999999765432
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCC---hhhHHHHHHHhcCCCCHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN---VVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~---~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... ......+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.. ...++..+.+.++....+...
T Consensus 239 ~~~-~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 239 PDT-PQCYGWSGTLETNSPELLAL--DPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred ccc-ccccccccccCccCHhHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 221 11234679999999999976 578999999999999999999999998754 345566666666544333221
Q ss_pred HhhhHHHHHHHHhhcc--CCCCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRK--KKPIPFSQKF--PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~--~~~~~~~~~~--~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
... ......+..... ..+......+ ...+..+.+||.+||.+||.+|||+.|+|.||||..
T Consensus 316 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 316 NGS-TNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred ccc-hhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 111 111111111111 1111111111 245678999999999999999999999999999975
No 115
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.5e-43 Score=358.43 Aligned_cols=287 Identities=37% Similarity=0.659 Sum_probs=226.2
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
||.-++|++.+.||+|++|.||+|.++.+++.||||.+...... .....+.+|+++++.++|+||+++++++...
T Consensus 1 ~~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 75 (291)
T cd07844 1 FGKLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIHTK---- 75 (291)
T ss_pred CCCccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEecC----
Confidence 56778999999999999999999999999999999998643222 2234467899999999999999999998433
Q ss_pred CccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
...|+||||+.++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 76 -~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 154 (291)
T cd07844 76 -KTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKS 154 (291)
T ss_pred -CeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccC
Confidence 468999999999999988764 468999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~-~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.... ......++..|+|||++.+. ..++.++||||+||++|+|++|+.||.+.. ..+++..+.+.++.+..+.+.
T Consensus 155 ~~~~---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07844 155 VPSK---TYSNEVVTLWYRPPDVLLGS-TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230 (291)
T ss_pred CCCc---cccccccccccCCcHHhhcC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence 2111 11234578899999988642 457889999999999999999999998766 667778888888888776554
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCC--HHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNAN--PLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s--~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.......... ..............++..+ ..+.+||.+||..||.+|||+.|+|+||||
T Consensus 231 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 231 GVSSNPEFKP-YSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhhcccccc-ccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 4321100000 0000011111222333444 789999999999999999999999999998
No 116
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.5e-43 Score=365.92 Aligned_cols=250 Identities=26% Similarity=0.452 Sum_probs=205.0
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++||+|+||.||+|.+..+++.||||+++... ........+..|..++..+ +||||+++++++... ..+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTK-----EHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CEEEEEE
Confidence 46999999999999999999999999987432 1223445566777777654 799999999988433 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||++ ++|..++...+.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 76 e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---~~ 152 (316)
T cd05592 76 EYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---GK 152 (316)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---Cc
Confidence 9997 5999999888889999999999999999999999999999999999999999999999999997543222 12
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~-------------------- 210 (316)
T cd05592 153 ASTFCGTPDYIAPEILKG--QKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN-------------------- 210 (316)
T ss_pred cccccCCccccCHHHHcC--CCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--------------------
Confidence 245679999999999976 5789999999999999999999999998776544333221
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA-EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta-~elL~hp~f~~~ 319 (560)
.. ......++..+.+||.+||+.||.+||++ .+++.||||...
T Consensus 211 -------~~----~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 211 -------DR----PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred -------CC----CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 00 01113467889999999999999999986 588899999854
No 117
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=2.3e-43 Score=361.12 Aligned_cols=296 Identities=36% Similarity=0.615 Sum_probs=231.7
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc--
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-- 96 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-- 96 (560)
...-++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+++|+.++|+||+++++++.....
T Consensus 4 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (311)
T cd07866 4 CSKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKS 83 (311)
T ss_pred CcccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence 344578999999999999999999999999999999986433333333456789999999999999999998765432
Q ss_pred -CCCccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 97 -REFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 97 -~~~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.....+|+|+||++++|...+... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 84 ~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 163 (311)
T cd07866 84 KRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred cccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccch
Confidence 233468999999999988888653 479999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCC--------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHh
Q 008607 175 VAFNDTPT--------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246 (560)
Q Consensus 175 ~~~~~~~~--------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~ 246 (560)
........ ....+...+++.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~ 242 (311)
T cd07866 164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKL 242 (311)
T ss_pred hccCCCcccccCCcccccccccceeccCcCChHHhhCC-CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 65332211 1122445788999999987542 45788999999999999999999999999999888888888
Q ss_pred cCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 247 ~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.+.+.+..+.....-..... .......+......+..+++.+.+||.+||..||.+|||+.|+|.||||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 243 CGTPTEETWPGWRSLPGCEG-VHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred hCCCChhhchhhhhcccccc-cccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 88776554332211000000 0001111122223345567889999999999999999999999999998
No 118
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.3e-44 Score=369.26 Aligned_cols=251 Identities=27% Similarity=0.454 Sum_probs=208.7
Q ss_pred EEEEeecCCeEEEEEEE---CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 28 EEVIGKGSYGVVCSAYD---TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d---~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
++.||+|+||.||++++ ..+|+.||+|++............+.+|+++|+.++||||+++++++... ..+|+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 75 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTE-----GKLYL 75 (318)
T ss_pred CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----CEEEE
Confidence 36799999999999976 46889999999975433333455678899999999999999999988543 46899
Q ss_pred EEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 105 VFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 105 V~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
||||++ ++|.+++.....+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 153 (318)
T cd05582 76 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK-- 153 (318)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--
Confidence 999998 59999998888899999999999999999999999999999999999999999999999999876433211
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
.....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 154 -~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~----------------- 213 (318)
T cd05582 154 -KAYSFCGTVEYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKA----------------- 213 (318)
T ss_pred -ceecccCChhhcCHHHHcC--CCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcC-----------------
Confidence 1234679999999999976 57889999999999999999999999887755444333210
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccccc
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGL 319 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~ 319 (560)
. ......+++.+.+||++||+.||.+||+ +++++.||||..+
T Consensus 214 ---------~-----~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 214 ---------K-----LGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred ---------C-----CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 0 0112356889999999999999999999 7889999999853
No 119
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.6e-43 Score=366.62 Aligned_cols=264 Identities=23% Similarity=0.406 Sum_probs=212.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.++||+|+||.||++++..+++.||+|++.+.. ........+.+|+.++..++|++|+.+++.+... ..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDE-----NN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecC-----CE
Confidence 46999999999999999999999999999999986421 1222334577899999999999999999988443 46
Q ss_pred EEEEEecCC-ccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||+. |+|.+++.. ...+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 899999997 699999977 457999999999999999999999999999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... .....+||+.|+|||++.+. ...++.++|||||||++|||++|+.||.+.+....+..+..
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~----------- 222 (332)
T cd05623 156 GTV--QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN----------- 222 (332)
T ss_pred Ccc--eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC-----------
Confidence 211 12345799999999998531 14578899999999999999999999988776555444322
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCcccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD--RPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~--Rpta~elL~hp~f~~~ 319 (560)
......+......+++.+.+||++||..++.+ |++++|+++||||.++
T Consensus 223 ---------------~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 223 ---------------HKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred ---------------CCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 11112233334567899999999999765554 6899999999999864
No 120
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=2.9e-43 Score=372.15 Aligned_cols=263 Identities=24% Similarity=0.379 Sum_probs=212.0
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..++|++.+.||+|+||.||+|++..+++.||+|++... .........+.+|+.+++.++||||+++++++...
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~----- 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD----- 115 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC-----
Confidence 347999999999999999999999999999999998642 12223345677899999999999999999988443
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|||||+ |+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~ 194 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 194 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCc
Confidence 46999999997 5899888654 589999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccccCccccccccccccc--CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~--~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... ......+||+.|+|||++.+.. ..++.++|||||||++|||++|+.||.+.+....+..|...
T Consensus 195 ~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~---------- 262 (371)
T cd05622 195 EGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH---------- 262 (371)
T ss_pred CCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC----------
Confidence 211 1123568999999999986421 23788999999999999999999999987765544443321
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD--RPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~--Rpta~elL~hp~f~~ 318 (560)
.....+ .....++..+.+||.+||..++.+ |++++|+++|+||++
T Consensus 263 ----------------~~~~~~-~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 263 ----------------KNSLTF-PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred ----------------CCcccC-CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 111111 123467899999999999844433 789999999999976
No 121
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-44 Score=342.30 Aligned_cols=257 Identities=25% Similarity=0.380 Sum_probs=222.9
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
..-+.|++.+.||+|-||.||+|+.+.++..||+|++.+. ........++.||++|-..|+||||+++++.|.+.
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~---- 94 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDS---- 94 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheecc----
Confidence 4456799999999999999999999999999999998643 22333446788999999999999999999999554
Q ss_pred CccEEEEEecCC-ccHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIK--ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~--~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
..+|+++||.. |+|+..+. ....+++...+.+++|++.||.|||..+||||||||+|+|++.++.+||+|||-+..
T Consensus 95 -~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~ 173 (281)
T KOG0580|consen 95 -KRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVH 173 (281)
T ss_pred -ceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceee
Confidence 45999999998 79999998 566799999999999999999999999999999999999999999999999999865
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
.. .....+.|||..|.+||...+ ..++..+|+|++|++.||++.|.+||...+..+.+..|.++-
T Consensus 174 ~p-----~~kR~tlcgt~dyl~pEmv~~--~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~-------- 238 (281)
T KOG0580|consen 174 AP-----SNKRKTLCGTLDYLPPEMVEG--RGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD-------- 238 (281)
T ss_pred cC-----CCCceeeecccccCCHhhcCC--CCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc--------
Confidence 42 123467899999999999987 689999999999999999999999999888777776665421
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
-+ ....++..+.|||.+||.++|.+|.+..|++.|||+...
T Consensus 239 ----------------~~-------~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 239 ----------------LK-------FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred ----------------cc-------CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 00 114678999999999999999999999999999998643
No 122
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=373.19 Aligned_cols=256 Identities=30% Similarity=0.464 Sum_probs=220.5
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
...|+.++.||+|+||.||+|+|..|++.||||++... ........+..|+.+|..++++||.++++.|+... .
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le-~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~ 85 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLE-EAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----K 85 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechh-hcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----c
Confidence 45688889999999999999999999999999999753 23345677889999999999999999999997665 4
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
++++||||. |++.+.++....+.+.++..++++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+.......
T Consensus 86 LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred HHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 899999998 5899999888878999999999999999999999999999999999999999999999999997765443
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.. ..+++||+.|||||++.. ..|+.++||||||++.+||++|.+||.......
T Consensus 166 ~r---r~tfvGTPfwMAPEVI~~--~~Y~~KADIWSLGITaiEla~GePP~s~~hPmr---------------------- 218 (467)
T KOG0201|consen 166 KR---RKTFVGTPFWMAPEVIKQ--SGYDTKADIWSLGITAIELAKGEPPHSKLHPMR---------------------- 218 (467)
T ss_pred hc---cccccccccccchhhhcc--ccccchhhhhhhhHHHHHHhcCCCCCcccCcce----------------------
Confidence 32 367899999999999986 689999999999999999999999997655421
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
++-.+.+..|..+.. .+++.+++||..||++||+.||+|.++|+|+|++.
T Consensus 219 -----vlflIpk~~PP~L~~---~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 219 -----VLFLIPKSAPPRLDG---DFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred -----EEEeccCCCCCcccc---ccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 112222333333332 67899999999999999999999999999999986
No 123
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=4.6e-43 Score=383.74 Aligned_cols=268 Identities=25% Similarity=0.385 Sum_probs=219.9
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC--
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR-- 97 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~-- 97 (560)
...++|++.+.||+|+||+||+|.+..+|+.||||++............+.+|+.+|..++|+||+++++.+......
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 345899999999999999999999999999999999976544555667788999999999999999998877543211
Q ss_pred -CCccEEEEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccc
Q 008607 98 -EFKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171 (560)
Q Consensus 98 -~~~~i~lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFG 171 (560)
....+++||||+. |+|.+++.. ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG 188 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG 188 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence 1124789999998 599998865 3468999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
+++........ ......+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||.+.+..+.+..+..
T Consensus 189 ls~~~~~~~~~-~~~~~~~Gt~~Y~aPE~~~~--~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~------ 259 (496)
T PTZ00283 189 FSKMYAATVSD-DVGRTFCGTPYYVAPEIWRR--KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA------ 259 (496)
T ss_pred cCeeccccccc-cccccccCCcceeCHHHhCC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc------
Confidence 99865332211 11245689999999999976 5789999999999999999999999988765444332211
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.. .....+.+++.+.+||.+||..||.+||++.++|+|||++.+.
T Consensus 260 ---------------------~~---~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 260 ---------------------GR---YDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred ---------------------CC---CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 00 1112346789999999999999999999999999999987643
No 124
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.3e-43 Score=364.83 Aligned_cols=250 Identities=24% Similarity=0.447 Sum_probs=207.4
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||+||+|.+..++..||||++.... ........+.+|+.+++.+ +||||+++++++... ..+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~-----~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTK-----DRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcC-----CEEEEEE
Confidence 46999999999999999999999999987432 2233456677899999888 699999999988443 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+. ++|...+...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (318)
T cd05570 76 EYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV---T 152 (318)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC---c
Confidence 9998 58999998888899999999999999999999999999999999999999999999999999865322111 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~-------------------- 210 (318)
T cd05570 153 TSTFCGTPDYIAPEILSY--QPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILE-------------------- 210 (318)
T ss_pred ccceecCccccCHHHhcC--CCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHc--------------------
Confidence 234579999999999976 5789999999999999999999999987765443332211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA-----EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta-----~elL~hp~f~~~ 319 (560)
... .....++..+.+||++||+.||.+||++ .++++||||+..
T Consensus 211 -------~~~----~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 211 -------DEV----RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred -------CCC----CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 000 0113468899999999999999999999 999999999864
No 125
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.7e-43 Score=381.07 Aligned_cols=282 Identities=25% Similarity=0.326 Sum_probs=211.7
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.+..|.+.+.||+|+||.||+|.+..++..||||... ...+.+|+++|+.|+|+||+++++++... .
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~-----~ 233 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVVG-----G 233 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEEC-----C
Confidence 4567999999999999999999999999999999643 22356899999999999999999987543 3
Q ss_pred cEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..++|||++.++|..++... ..+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 234 ~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 234 LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 58999999999999988764 46999999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCC-CCCCC------hhhHHHHHHHhcCCCCH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPGKN------VVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~p-F~~~~------~~~~~~~i~~~~g~p~~ 252 (560)
... ......+||+.|+|||++.+ ..++.++|||||||+||||++|..+ |.... ...++..+....+....
T Consensus 314 ~~~-~~~~~~~GT~~Y~APE~~~~--~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~ 390 (461)
T PHA03211 314 WST-PFHYGIAGTVDTNAPEVLAG--DPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVD 390 (461)
T ss_pred ccc-ccccccCCCcCCcCHHHHcC--CCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccc
Confidence 211 11234579999999999977 5789999999999999999998754 43321 12334444333332211
Q ss_pred HHHHHhhhHHHHHHHHhh----ccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 253 EAIARVRNEKARRYLSSM----RKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
+............+.... ......+....+...++.+.+||.+||++||.+|||++|||+||||+.
T Consensus 391 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 391 EFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 110000000011111111 111111112233456788999999999999999999999999999973
No 126
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=3.1e-43 Score=365.64 Aligned_cols=259 Identities=23% Similarity=0.402 Sum_probs=204.7
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++||+|+||.||+|.+..+++.||||+++.... .......+.+|+.+++.+ +||||+++++++... ..+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcC-----CEEEEEE
Confidence 479999999999999999999999999975322 233445678899999988 699999999988543 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
|||+ ++|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 76 e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---~~ 152 (329)
T cd05588 76 EFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---DT 152 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC---Cc
Confidence 9998 4899999888889999999999999999999999999999999999999999999999999987432211 12
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||......+ .+..... ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~----------~~~~~~~--------~~ 212 (329)
T cd05588 153 TSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSD----------NPDQNTE--------DY 212 (329)
T ss_pred cccccCCccccCHHHHcC--CCCCCccceechHHHHHHHHHCCCCcccccccc----------cccccch--------HH
Confidence 245689999999999976 578899999999999999999999996422111 0000000 00
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT------AEEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt------a~elL~hp~f~~~ 319 (560)
....+... ... ....++..+.+||++||+.||.+|++ ++++++||||..+
T Consensus 213 ~~~~~~~~-~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 213 LFQVILEK-QIR---IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred HHHHHHcC-CCC---CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 00111111 111 12356889999999999999999987 7999999999754
No 127
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=5e-43 Score=356.94 Aligned_cols=288 Identities=39% Similarity=0.675 Sum_probs=229.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||+|++|.||+|.+..+|+.||||++............+.+|+++++.++|+||+++++++... ...
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSE-----KRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecC-----CeE
Confidence 479999999999999999999999999999999865433333445678899999999999999999998533 468
Q ss_pred EEEEecCCccHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEEecccccccccCC
Q 008607 103 YVVFELMESDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~~~~--lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL~DFGla~~~~~~ 179 (560)
|+||||++++|.+.+..... +++..++.++.||+.||+|||++||+||||+|+||+++. ++.+||+|||++......
T Consensus 77 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 77 YLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred EEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 99999999999998876543 588899999999999999999999999999999999985 567999999999754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. .......++..|+|||.+.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++.|....+....
T Consensus 157 ~---~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (294)
T PLN00009 157 V---RTFTHEVVTLWYRAPEILLGS-RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVT 232 (294)
T ss_pred c---cccccCceeecccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccc
Confidence 1 112345778999999988552 457889999999999999999999999988888888888888877665543221
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.. ..+................+..++.+.+||.+||+.||++||+++++|+||||.++..
T Consensus 233 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~~ 292 (294)
T PLN00009 233 SL--PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLGD 292 (294)
T ss_pred cc--hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHhc
Confidence 11 1111111111122222334677899999999999999999999999999999987653
No 128
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=7.3e-43 Score=353.26 Aligned_cols=281 Identities=41% Similarity=0.693 Sum_probs=230.3
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|++.+.||.|++|.||+|.+..+|..||+|++............+.+|+.+++.++|+||+++++++... ...|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~-----~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSE-----NKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccC-----CeEEE
Confidence 6789999999999999999999999999999875433333445678899999999999999999998543 46899
Q ss_pred EEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 105 VFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 105 V~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
||||++++|.+++.... .+++..++.++.||+.||+|||+.+++||||+|+||+++.++.++|+|||++........
T Consensus 76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 76 VFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred EEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 99999999999998765 699999999999999999999999999999999999999999999999999875422111
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
......++..|+|||++.+. ..++.++|||||||++|+|++|++||.+.+....+..+.+..++|....+......
T Consensus 155 --~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (283)
T cd07835 155 --TYTHEVVTLWYRAPEILLGS-RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSL- 230 (283)
T ss_pred --ccCccccccCCCCCceeecC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhc-
Confidence 12334678899999987552 35788999999999999999999999999888888888888888877665433211
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..+...+............+.++..+.+||.+||+.||.+|||++|++.||||
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 231 -PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred -hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 12222222222333344456788999999999999999999999999999998
No 129
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-43 Score=369.26 Aligned_cols=279 Identities=25% Similarity=0.338 Sum_probs=208.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
...|++++.||+|+||.||+|.+..+++.||+|+.... ....|+.+|+.++|+||+++++++... ..
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 131 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVSG-----AI 131 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEeC-----Ce
Confidence 35699999999999999999999999999999975421 234699999999999999999988543 35
Q ss_pred EEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
.|+|||++.++|.+++.. ...+++..++.|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 132 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 211 (357)
T PHA03209 132 TCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP 211 (357)
T ss_pred eEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCc
Confidence 899999999999998876 4469999999999999999999999999999999999999999999999999997532221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCC-CCCCCCCh---------hhHHHHHHHhcCCC
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNV---------VHQLDIMTDLLGTP 250 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~-~pF~~~~~---------~~~~~~i~~~~g~p 250 (560)
......||+.|+|||++.+ ..++.++|||||||++|||+++. ++|.+... ..++..+...++..
T Consensus 212 ----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 285 (357)
T PHA03209 212 ----AFLGLAGTVETNAPEVLAR--DKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH 285 (357)
T ss_pred ----ccccccccccccCCeecCC--CCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccC
Confidence 1234679999999999976 57899999999999999999865 44443221 12233333334433
Q ss_pred CHHHHHHhhhHHHHHHHHhhcc-CCCCCCC--CCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 251 SPEAIARVRNEKARRYLSSMRK-KKPIPFS--QKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~--~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..+............++..... +.+.... ....+++..+.+||.+||++||.+|||++|+|+||||+.+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 286 PEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred hhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 2221111111111222221110 1111000 0112567788999999999999999999999999999853
No 130
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=5.1e-43 Score=356.15 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=209.7
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.|++.++||+|+||.||++.+..+++.||||++.... ........+.+|+.+|+.++|+||+.+++.+... ..+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCC-----CeE
Confidence 4899999999999999999999999999999986422 2222334577899999999999999999988433 468
Q ss_pred EEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|+||||+. ++|..++... ..+++..+..++.||+.||.|||+.||+||||||+|||+++++.++|+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999998 5888887653 36999999999999999999999999999999999999999999999999998764322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. ....+|+..|+|||++.+ ..++.++||||+||++|+|++|+.||.+.+.......+...
T Consensus 156 ~~----~~~~~~~~~y~aPE~~~~--~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~------------- 216 (285)
T cd05605 156 ET----IRGRVGTVGYMAPEVVKN--ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR------------- 216 (285)
T ss_pred Cc----cccccCCCCccCcHHhcC--CCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH-------------
Confidence 21 134578999999999976 57889999999999999999999999876643332222111
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
+. . .. ......+++.+.+||.+||..||.+|| +++++++||||...
T Consensus 217 -------~~---~-~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 217 -------VK---E-DQ---EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred -------hh---h-cc---cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 00 0 00 112235688899999999999999999 99999999999863
No 131
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5.6e-43 Score=354.34 Aligned_cols=282 Identities=37% Similarity=0.694 Sum_probs=221.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+++|+.++|+||+++++++.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRR-----KKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhccc-----CCeE
Confidence 46999999999999999999999999999999986543333345667899999999999999999998843 3468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++ .|..++.....+++..++.++.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~- 154 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 154 (286)
T ss_pred EEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-
Confidence 999999996 566666556679999999999999999999999999999999999999999999999999987653322
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.......++.+|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+....+.............
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 155 --EVYTDYVATRWYRAPELLVGD-TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred --cccCcccceeeccCcHHhccc-cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 123456789999999998652 45778999999999999999999999988877777776666555432211111000
Q ss_pred HHHHHHHhhcc---CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRK---KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~---~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. .+..+.. .........+++++..+.+||.+||..||.+||++.++|+||||
T Consensus 232 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 232 P---LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred h---HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 0 0000000 01111223356788999999999999999999999999999998
No 132
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.5e-43 Score=354.63 Aligned_cols=281 Identities=37% Similarity=0.689 Sum_probs=227.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||.|++|.||+|.+..+|+.||||++..... ......+.+|+.+++.++|+||+++++.+... ...|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 74 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE-EGTPSTAIREISLMKELKHENIVRLHDVIHTE-----NKLM 74 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc-ccchHHHHHHHHHHHhhcCCCEeeeeeeEeeC-----CcEE
Confidence 48999999999999999999999999999999875322 22345677899999999999999999988543 4689
Q ss_pred EEEecCCccHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELMESDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~~---~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||++++|.+++.... .++++.+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 75 LVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred EEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 999999999999887643 58999999999999999999999999999999999999999999999999997543221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. .....+++..|++||.+.+. ..++.++|||||||++|+|++|+.||.+.+..+.+..+....+.|....+..+..
T Consensus 155 ~---~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 155 N---TFSNEVVTLWYRAPDVLLGS-RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred c---ccccccccccccChHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 1 12345678999999988552 4578899999999999999999999999998888888888888888766654431
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. ..+................+..++.+.++|.+||+.||.+||+++|+++||||
T Consensus 231 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 231 L--PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred C--chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 1 11111111111111122334568889999999999999999999999999998
No 133
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=6.2e-43 Score=362.49 Aligned_cols=255 Identities=23% Similarity=0.397 Sum_probs=210.1
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCcc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.|++.+.||+|+||.||+|.++.+|+.||||++..... .......+..|+.+++.+. |++|+.+++++... ..
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~-----~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV-----DR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecC-----CE
Confidence 47889999999999999999999999999999874321 2234456778999998886 56777888877433 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||++ ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 899999998 5999999888889999999999999999999999999999999999999999999999999987532221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 156 ~---~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~-------------- 216 (323)
T cd05615 156 V---TTRTFCGTPDYIAPEIIAY--QPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH-------------- 216 (323)
T ss_pred c---cccCccCCccccCHHHHcC--CCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--------------
Confidence 1 1234679999999999976 57899999999999999999999999887755444433220
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~ 319 (560)
. ......++..+.+||.+||+.||.+|++ .+++++||||..+
T Consensus 217 ------------~-----~~~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 217 ------------N-----VSYPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred ------------C-----CCCCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 0 0112356788999999999999999997 5799999999864
No 134
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.6e-43 Score=356.36 Aligned_cols=253 Identities=24% Similarity=0.383 Sum_probs=202.7
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||+|+||+||++.+..+|+.||+|++.... ........+..|+.+|+.++|+||+.+.+++... ..+|+|||||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTK-----TDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCC-----CeEEEEEeCC
Confidence 799999999999999999999999986432 1222345677899999999999999999888433 4689999999
Q ss_pred C-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcc
Q 008607 110 E-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (560)
Q Consensus 110 ~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~ 184 (560)
+ ++|...+.. +..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-- 153 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK-- 153 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--
Confidence 8 588877643 346999999999999999999999999999999999999999999999999999765332221
Q ss_pred cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHH
Q 008607 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKAR 264 (560)
Q Consensus 185 ~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 264 (560)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||...........+..
T Consensus 154 -~~~~~g~~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~------------------- 211 (280)
T cd05608 154 -TKGYAGTPGFMAPELLQG--EEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ------------------- 211 (280)
T ss_pred -ccccCCCcCccCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHH-------------------
Confidence 234679999999999976 5788999999999999999999999976543211111100
Q ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 265 RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
... ..+ ......+++.+.+||.+||+.||.+|| +++++++||||+++.
T Consensus 212 ----~~~-~~~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 212 ----RIL-NDS---VTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred ----hhc-ccC---CCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 000 001 112245788999999999999999999 899999999998753
No 135
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=4.2e-43 Score=357.32 Aligned_cols=286 Identities=40% Similarity=0.661 Sum_probs=230.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.|++.+.||.|+||.||+|.+..+++.+|+|.++...........+.+|+.+++.++||||+.+++++.... ...+
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSN---LDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecC---CCcE
Confidence 5799999999999999999999999999999999754333333446778999999999999999999885432 2579
Q ss_pred EEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+|+||+.++|.+++.... .+++..++.++.||+.||+|||+.||+|+||||+|||++.++.+||+|||++........
T Consensus 82 ~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 82 YMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred EEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 9999999999999987654 599999999999999999999999999999999999999999999999999986543211
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......+++.|+|||.+.+. ..++.++|||||||++|+|++|.+||.+.+..+.+..+...++.|....+.....-
T Consensus 162 ---~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 162 ---PYTQLVVTLWYRAPELLLGA-KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred ---ccccccccccccCchhhcCC-ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 12345678999999998652 34688999999999999999999999999988888888888888877765543211
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCC--CHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNA--NPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~--s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..... ..........+...++.. ++.+.+||++||+.||++|||+.|+|.||||
T Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 238 PGAKK-KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred chhcc-cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 00000 001111112223344543 8899999999999999999999999999998
No 136
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.5e-43 Score=365.45 Aligned_cols=250 Identities=28% Similarity=0.492 Sum_probs=204.7
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~-iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||+||+|.+..+|+.||||++.... ........+.+|.. +++.++||||+++++.+... ..+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTT-----EKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecC-----CEEEEEE
Confidence 46999999999999999999999999986432 12233455666665 46789999999999988443 4689999
Q ss_pred ecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+.+ +|...+.....+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~---~ 152 (325)
T cd05604 76 DFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD---T 152 (325)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC---C
Confidence 99984 8999998888899999999999999999999999999999999999999999999999999875322221 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~-------------------- 210 (325)
T cd05604 153 TTTFCGTPEYLAPEVIRK--QPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH-------------------- 210 (325)
T ss_pred cccccCChhhCCHHHHcC--CCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc--------------------
Confidence 245689999999999976 5788999999999999999999999988765444332221
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA----EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta----~elL~hp~f~~~ 319 (560)
. . ....+..+..+.+||++||+.||.+||++ .+++.||||...
T Consensus 211 -------~-~---~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 211 -------K-P---LVLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred -------C-C---ccCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 0 0 11224678899999999999999999976 699999999853
No 137
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=5.1e-43 Score=364.15 Aligned_cols=258 Identities=23% Similarity=0.429 Sum_probs=203.9
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||.||+|++..+++.||+|++.+.. ........+.+|+.++..+ +||||+++++++... ..+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE-----SRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeC-----CEEEEEE
Confidence 47999999999999999999999999997542 2333455678899998776 799999999988543 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||++ ++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~---~ 152 (329)
T cd05618 76 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---T 152 (329)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC---c
Confidence 9998 58999888888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||....... .+... ...
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~----------~~~~~---------~~~ 211 (329)
T cd05618 153 TSTFCGTPNYIAPEILRG--EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSD----------NPDQN---------TED 211 (329)
T ss_pred cccccCCccccCHHHHcC--CCCCCccceecccHHHHHHhhCCCCCccCCCcC----------Ccccc---------cHH
Confidence 244689999999999976 578899999999999999999999995321100 00000 000
Q ss_pred H-HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccccc
Q 008607 266 Y-LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT------AEEALADPYFKGL 319 (560)
Q Consensus 266 ~-l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt------a~elL~hp~f~~~ 319 (560)
+ ...+... .. ......+..+.+||++||+.||.+|++ ++++++||||+..
T Consensus 212 ~~~~~i~~~-~~---~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 212 YLFQVILEK-QI---RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred HHHHHHhcC-CC---CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 0 0111111 11 122456889999999999999999998 5899999999764
No 138
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=4.6e-43 Score=362.46 Aligned_cols=251 Identities=25% Similarity=0.427 Sum_probs=205.8
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHh-cCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRL-LRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~-l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||.||+|++..+++.||||++..... .......+..|..++.. ++||||+++++++... ..+|+||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~-----~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTK-----ENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeC-----CEEEEEE
Confidence 469999999999999999999999999875321 12334556778888876 4899999999998543 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||++ |+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (316)
T cd05619 76 EYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA---K 152 (316)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC---c
Confidence 9998 59999998887899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~-------------------- 210 (316)
T cd05619 153 TCTFCGTPDYIAPEILLG--QKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRM-------------------- 210 (316)
T ss_pred eeeecCCccccCHHHHcC--CCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--------------------
Confidence 234679999999999976 5789999999999999999999999988765443332211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH-HHhcCccccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE-EALADPYFKGLA 320 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~-elL~hp~f~~~~ 320 (560)
..+ .....++..+.+||.+||+.||.+|+++. ++++||||+.+.
T Consensus 211 -------~~~----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 211 -------DNP----CYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred -------CCC----CCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 000 01124678899999999999999999996 899999998753
No 139
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.7e-43 Score=351.91 Aligned_cols=280 Identities=39% Similarity=0.733 Sum_probs=222.5
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
|++.+.||+|+||.||+|.+..+++.||+|+++...... ......+|+.+++.+. |+||+++++++.... ...++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~---~~~~~ 76 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL-EQVNNLREIQALRRLSPHPNILRLIEVLFDRK---TGRLA 76 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc-hhhhHHHHHHHHhhcCCCCCccceEEEEecCC---CCcEE
Confidence 788999999999999999999999999999987543332 2234457999998886 999999999986531 24689
Q ss_pred EEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+||||++++|.+.+... ..+++..++.++.||+.||.|||+.||+||||||+||+++. +.+||+|||+++.......
T Consensus 77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 77 LVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 99999999999888764 46899999999999999999999999999999999999999 9999999999976533222
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
.....++..|+|||.+... ..++.++|||||||++|+|++|.+||.+.+..+.+..+.+.++.+............
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 155 ---YTEYISTRWYRAPECLLTD-GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred ---cCCCCCCcccCChhHhhcC-CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 1345689999999976432 456889999999999999999999999999988888898888888765532221110
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...+ .+.......+....+.++..+.+||.+||.+||.+|||++++|+||||
T Consensus 231 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 231 HMNY--NFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccc--cCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0000 000000111112234568999999999999999999999999999998
No 140
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.7e-43 Score=368.51 Aligned_cols=258 Identities=26% Similarity=0.331 Sum_probs=203.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
-+.|++++.||+|+||.||+|.+..+|+.||||++.... .......+.+|+++|+.++|+||+++++++.. ...
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~ 146 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH-----NGE 146 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-----CCe
Confidence 356889999999999999999999999999999986422 22345678899999999999999999998843 346
Q ss_pred EEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+|||||.+ +|.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 147 ~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred EEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 8999999985 66432 346788899999999999999999999999999999999999999999999998653221
Q ss_pred CCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
. .....+||..|+|||++... ...++.++|||||||++|||++|+.||......+....+..
T Consensus 223 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~------------ 287 (353)
T PLN00034 223 D---PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCA------------ 287 (353)
T ss_pred c---cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH------------
Confidence 1 12446899999999987431 12345689999999999999999999974332221111111
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..... .......++..+.+||.+||+.||++|||+.|+|+||||.+.
T Consensus 288 ------------~~~~~---~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 288 ------------ICMSQ---PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred ------------HhccC---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 00000 111234678899999999999999999999999999999864
No 141
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=7.6e-43 Score=363.06 Aligned_cols=263 Identities=22% Similarity=0.378 Sum_probs=212.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||++++..+++.||+|++.+.. ........+.+|+.+++.+.|+||+.+++.+.. ...
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~-----~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQD-----ENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CCE
Confidence 47999999999999999999999999999999986421 222334457789999999999999999998843 346
Q ss_pred EEEEEecCC-ccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||+. |+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 899999997 599999987 457999999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCccccccccccccc---CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~---~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... .....+||+.|+|||++.+.. ..++.++|||||||++|+|++|+.||.+.+..+.+..+..
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~----------- 222 (331)
T cd05624 156 GTV--QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN----------- 222 (331)
T ss_pred Cce--eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc-----------
Confidence 211 113357999999999986421 3577899999999999999999999988775544433321
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC--CCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD--RPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~--Rpta~elL~hp~f~~ 318 (560)
.....++......++..+.+||.+||..++.+ |++++++++||||++
T Consensus 223 ---------------~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 223 ---------------HEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred ---------------CCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 11112233344567899999999999976654 579999999999985
No 142
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=4.5e-43 Score=362.77 Aligned_cols=250 Identities=26% Similarity=0.446 Sum_probs=203.3
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~-iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++||+|+||.||+|++..+|+.||+|++.+.. ........+.+|.. +++.++||||+++++.+... ..+|+||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~-----~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTA-----EKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcC-----CEEEEEE
Confidence 47999999999999999999999999986432 12223345556654 67889999999999888433 4689999
Q ss_pred ecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
|||++ +|...+.....+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~---~ 152 (321)
T cd05603 76 DYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE---T 152 (321)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC---c
Confidence 99985 8998888888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-------------------- 210 (321)
T cd05603 153 TSTFCGTPEYLAPEVLRK--EPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH-------------------- 210 (321)
T ss_pred cccccCCcccCCHHHhcC--CCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc--------------------
Confidence 245679999999999976 5789999999999999999999999988765443332211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA----EEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta----~elL~hp~f~~~ 319 (560)
.+. ...+..+..+.+||.+||+.||.+|+++ .++++|+||..+
T Consensus 211 --------~~~---~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 211 --------KPL---QLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred --------CCC---CCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 011 1224567889999999999999999875 599999999753
No 143
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-42 Score=345.86 Aligned_cols=258 Identities=26% Similarity=0.441 Sum_probs=211.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC---hhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH---VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~---~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
+.|++.+.||+|++|.||.|.+..++..||+|.+...... ......+.+|+.+++.++||||+++++++...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDD----- 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccC-----
Confidence 4699999999999999999999999999999998643221 12345688999999999999999999998443
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|+||+.+ +|.+++...+.+++..++.+++||+.||.|||+.||+||||||+||+++.++.++|+|||+++....
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 379999999984 8999998888899999999999999999999999999999999999999999999999999876433
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
............++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+..
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~------------- 221 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISG--EGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT------------- 221 (263)
T ss_pred cccccccccCCCcCccccCcceecc--CCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-------------
Confidence 2221111134568899999999977 4688999999999999999999999976554332221111
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
... .......++..+.+||++||..||.+|||+.++|+||||
T Consensus 222 -------------~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 222 -------------QPT---NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred -------------cCC---CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 000 011223578889999999999999999999999999998
No 144
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.8e-43 Score=362.78 Aligned_cols=249 Identities=27% Similarity=0.461 Sum_probs=203.9
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHH-HHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIK-LLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~-iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||+||+|++..+++.||+|++..... .......+.+|.. +++.++|+||+++++++... ..+|+||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~-----~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA-----DKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcC-----CeEEEEE
Confidence 469999999999999999999999999864221 1222334555544 56889999999999988443 4689999
Q ss_pred ecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+.+ +|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~---~ 152 (325)
T cd05602 76 DYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG---T 152 (325)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC---C
Confidence 99985 8999998888899999999999999999999999999999999999999999999999999975322211 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+....+..+..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-------------------- 210 (325)
T cd05602 153 TSTFCGTPEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN-------------------- 210 (325)
T ss_pred cccccCCccccCHHHHcC--CCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh--------------------
Confidence 245689999999999976 5789999999999999999999999988776554433321
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH----HHhcCccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE----EALADPYFKG 318 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~----elL~hp~f~~ 318 (560)
.+ ....+.+++.+.+||++||+.||.+|+++. ++++|+||..
T Consensus 211 --------~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~ 256 (325)
T cd05602 211 --------KP---LQLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSP 256 (325)
T ss_pred --------CC---cCCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCC
Confidence 01 112356789999999999999999999865 8999999975
No 145
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-43 Score=364.39 Aligned_cols=253 Identities=32% Similarity=0.434 Sum_probs=207.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcE-EEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEK-VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~-vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.....+.+.||+|+||+||++. ..|.. ||||++............+.+|+.+|..++|||||.+++++..+..
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~--~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~---- 113 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGK--WRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG---- 113 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEE--eCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----
Confidence 4455667779999999999995 45666 9999998644444446789999999999999999999999965431
Q ss_pred cEEEEEecCC-ccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCCCCeeeCCCC-cEEEeccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKPKNILANADC-KLKICDFGLARV 175 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~g-IiHrDLKP~NILl~~~~-~lKL~DFGla~~ 175 (560)
.++||||||+ |+|.+++.. ...++...+..|+.||++||.|||+.+ ||||||||+|||++.++ ++||||||+++.
T Consensus 114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~ 193 (362)
T KOG0192|consen 114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSRE 193 (362)
T ss_pred ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCcccee
Confidence 5899999998 699999987 568999999999999999999999999 99999999999999998 999999999987
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
..... ...+...||+.|||||++.+....|+.++||||||+++|||+||+.||.+.........+.....+|
T Consensus 194 ~~~~~---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp----- 265 (362)
T KOG0192|consen 194 KVISK---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRP----- 265 (362)
T ss_pred ecccc---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC-----
Confidence 64321 1224478999999999998412579999999999999999999999999888643333222111111
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.+ ...+++.+..||++||..||.+||+..+++.
T Consensus 266 -------------------~~-----p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 266 -------------------PI-----PKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred -------------------CC-----CccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 11 1227888999999999999999999999874
No 146
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.1e-42 Score=362.28 Aligned_cols=283 Identities=22% Similarity=0.367 Sum_probs=215.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|++.+.||+|+||.||+|.+..++..+|+|.+.... .......+.+|+++|+.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~ 77 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-----GE 77 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEEC-----CE
Confidence 468999999999999999999999999999999887532 233456788999999999999999999998543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||+. ++|.+++...+.+++..+..++.||+.||.|||+. +|+||||||+|||++.++.+||+|||++......
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 78 ISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 899999997 59999999888899999999999999999999975 7999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHH-hcCCCCHHHHH--
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTD-LLGTPSPEAIA-- 256 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~-~~g~p~~~~~~-- 256 (560)
. ....+||..|+|||++.+ ..++.++|||||||++|+|++|+.||......+....+.. ..+.+......
T Consensus 158 ~-----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 158 M-----ANSFVGTRSYMSPERLQG--THYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR 230 (333)
T ss_pred c-----cccCCCCccccCHHHhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence 1 134579999999999976 5788999999999999999999999987654332221110 11111100000
Q ss_pred ---------Hhhh-----HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 257 ---------RVRN-----EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ---------~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.... ..............+..+. ....+.++.+||.+||++||.+|||++|+|.||||+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLP--SGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCC--CCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 0000 0000111111111111111 12357889999999999999999999999999999753
No 147
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.2e-43 Score=365.27 Aligned_cols=249 Identities=25% Similarity=0.414 Sum_probs=201.9
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc---CCCCccccceeecCCCcCCCccEEEEE
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
||+|+||+||+|++..+|+.||||++.+.. ..........+|..++..+ .||||+.+++++... ..+|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~-----~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTD-----SDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecC-----CeEEEEE
Confidence 799999999999999999999999986421 1222344556777777665 699999999988443 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+. ++|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~---~ 152 (330)
T cd05586 76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK---T 152 (330)
T ss_pred cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC---C
Confidence 9998 58999998888899999999999999999999999999999999999999999999999999875322221 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 153 ~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~------------------- 212 (330)
T cd05586 153 TNTFCGTTEYLAPEVLLDE-KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFG------------------- 212 (330)
T ss_pred ccCccCCccccCHHHHcCC-CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcC-------------------
Confidence 2456899999999998652 45789999999999999999999999887654433332210
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC----CHHHHhcCccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP----TAEEALADPYFKG 318 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp----ta~elL~hp~f~~ 318 (560)
.. .+. ...+++.+.+||++||..||.+|| +++++++||||..
T Consensus 213 -------~~--~~~--~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 213 -------KV--RFP--KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred -------CC--CCC--CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 00 010 124688899999999999999998 7999999999975
No 148
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.3e-42 Score=351.61 Aligned_cols=286 Identities=38% Similarity=0.688 Sum_probs=223.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||+|+||.||+|.+..+++.||||+++...........+.+|+++++.++|+||+++++++.. ...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR-----KGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE-----CCEE
Confidence 47999999999999999999999999999999987544444455778899999999999999999999854 2468
Q ss_pred EEEEecCCccHHHH-HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMESDLHQV-IKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~gdL~~~-i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++++... +.....+++..++.++.||+.||.|||++||+||||+|+||+++.++.+||+|||++........
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 76 YLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred EEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99999999765554 44455799999999999999999999999999999999999999999999999999977544332
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.....++++.+|+|||++.+. ..++.++|||||||++|+|++|++||.+.+..+.+..+...++...+.........
T Consensus 156 --~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 156 --SPLTDYVATRWYRAPELLVGD-TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred --ccccCcccccCCcCCchhcCC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 122456789999999998762 37889999999999999999999999998888877777777776554332221110
Q ss_pred HHHHHHHhhccCCCCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFP-NANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~-~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
....-...........+...++ .++..+.+||++||..||++|||++++++||||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 0000000000000000111222 348889999999999999999999999999998
No 149
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.2e-42 Score=353.77 Aligned_cols=288 Identities=38% Similarity=0.650 Sum_probs=219.7
Q ss_pred ceEEEEEEeecCCeEEEEEEECC--CCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTR--TGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~--tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+|++.+.||+|+||.||+|.+.. ++..||||.+.... ........+.+|+.+++.++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 58999999999999999999988 89999999987532 1122345678899999999999999999998653 224
Q ss_pred cEEEEEecCCccHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC----CCcEEEeccc
Q 008607 101 DIYVVFELMESDLHQVIKAN-----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA----DCKLKICDFG 171 (560)
Q Consensus 101 ~i~lV~E~~~gdL~~~i~~~-----~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~----~~~lKL~DFG 171 (560)
.+|+||||++++|.+++... ..+++..++.++.||+.||.|||+.+|+||||||+|||++. ++.+||+|||
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg 157 (316)
T cd07842 78 SVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG 157 (316)
T ss_pred eEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence 68999999999888877532 26899999999999999999999999999999999999999 8999999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChh---------hHHHH
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV---------HQLDI 242 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~---------~~~~~ 242 (560)
++................+++.+|+|||++.+. ..++.++|||||||++|+|++|++||.+.+.. ..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred cccccCCCcccccccCCccccccccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 998653322211122345789999999987552 45788999999999999999999999876543 34556
Q ss_pred HHHhcCCCCHHHHHHhhhHH-HHHHHHhhccCCCCC------CCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 008607 243 MTDLLGTPSPEAIARVRNEK-ARRYLSSMRKKKPIP------FSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315 (560)
Q Consensus 243 i~~~~g~p~~~~~~~~~~~~-~~~~l~~~~~~~~~~------~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~ 315 (560)
+...++.+....+....... .....+... ....+ +...+...+..+.+||.+||+.||++|||+.|+++|||
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~ 315 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFK-TKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhcc-CCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCC
Confidence 66667766554443222110 011100110 00000 00111256788999999999999999999999999999
Q ss_pred c
Q 008607 316 F 316 (560)
Q Consensus 316 f 316 (560)
|
T Consensus 316 f 316 (316)
T cd07842 316 F 316 (316)
T ss_pred C
Confidence 8
No 150
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=7e-42 Score=347.98 Aligned_cols=286 Identities=37% Similarity=0.628 Sum_probs=220.0
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
|+..+.|++++.||+|+||.||+|.+..+|..||||.+..... ......+.+|+.+|+.++|+||+++++++...
T Consensus 1 ~~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 75 (291)
T cd07870 1 FGAATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE-EGVPFTAIREASLLKGLKHANIVLLHDIIHTK---- 75 (291)
T ss_pred CCccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc-CCCcHHHHHHHHHHHhcCCCCEeEEEEEEecC----
Confidence 3566889999999999999999999999999999999864321 22234567899999999999999999988432
Q ss_pred CccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
...|+||||+.++|.+.+... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.++.+||+|||+++...
T Consensus 76 -~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 76 -ETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred -CeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 468999999999888877653 468899999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~-~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.... ......++..|+|||.+.+. ..++.++|||||||++|+|++|..||.+.+ ..+++..+...+|.|......
T Consensus 155 ~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 155 IPSQ---TYSSEVVTLWYRPPDVLLGA-TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred CCCC---CCCCccccccccCCceeecC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 2111 12345678999999998642 457889999999999999999999998654 345566666677777665443
Q ss_pred HhhhHHHHHHHHhh-ccCCCCCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 257 RVRNEKARRYLSSM-RKKKPIPFSQKFP--NANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 257 ~~~~~~~~~~l~~~-~~~~~~~~~~~~~--~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.+... ..+.... ....+......+. ..++.+.+||.+||..||.+|||++|+|.||||
T Consensus 231 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 231 GVSKL--PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhhc--ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 33211 0000000 0001111111111 136789999999999999999999999999998
No 151
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.8e-42 Score=348.02 Aligned_cols=282 Identities=48% Similarity=0.794 Sum_probs=234.2
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|++.+.||.|++|.||+|.+..+|+.+++|++............+.+|+.+|+.++|+||+++++++... ..+|+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHK-----GDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccC-----CCEEE
Confidence 6788999999999999999999999999999875444434556788999999999999999999988543 46899
Q ss_pred EEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 105 VFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 105 V~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
|+||++++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||.+.......
T Consensus 76 v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--- 152 (283)
T cd05118 76 VFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--- 152 (283)
T ss_pred EEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---
Confidence 9999999999888764 579999999999999999999999999999999999999999999999999997654332
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
.......++.+|+|||.+.+. ..++.++|||||||++|+|++|+.||.+.+..+++..+...++.+..+.+...... .
T Consensus 153 ~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 230 (283)
T cd05118 153 RPYTHYVVTRWYRAPELLLGD-KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSL-A 230 (283)
T ss_pred ccccCccCcccccCcHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhh-h
Confidence 122345688999999998762 36889999999999999999999999999999999888888888877665544331 1
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
....-.+............+.++..+.+||.+||..||.+||++.++|.||||
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 11111222233333344556788999999999999999999999999999997
No 152
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.3e-42 Score=358.13 Aligned_cols=295 Identities=39% Similarity=0.611 Sum_probs=233.5
Q ss_pred cCCCCceEE-EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChh------------HHHHHHHHHHHHHhcCCCCcc
Q 008607 19 YGEGSRYKI-EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS------------DATRILREIKLLRLLRHPDIV 85 (560)
Q Consensus 19 ~~~~~~Y~i-~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~------------~~~~i~rEi~iL~~l~HpnIv 85 (560)
+.+.++|.. .+.||.|+||+||+|.+..+++.||||++........ ....+.+|+++|+.++|+||+
T Consensus 4 ~~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 83 (335)
T PTZ00024 4 FSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIM 83 (335)
T ss_pred cccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCccee
Confidence 456788875 5779999999999999999999999999864322110 012467899999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcE
Q 008607 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~l 165 (560)
++++++... ..+|+||||+.++|.+++.....++++.+..++.||+.||+|||+.||+|+||||+|||++.++.+
T Consensus 84 ~~~~~~~~~-----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 84 GLVDVYVEG-----DFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred eeeEEEecC-----CcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCE
Confidence 999998543 468999999999999999888889999999999999999999999999999999999999999999
Q ss_pred EEecccccccccCCC-----------CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC
Q 008607 166 KICDFGLARVAFNDT-----------PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (560)
Q Consensus 166 KL~DFGla~~~~~~~-----------~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~ 234 (560)
||+|||+++...... ..........++..|+|||.+.+. ..++.++|||||||++|+|++|++||.+.
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~ 237 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-EKYHFAVDMWSVGCIFAELLTGKPLFPGE 237 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 999999997654111 011122334678899999998652 35788999999999999999999999999
Q ss_pred ChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 008607 235 NVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314 (560)
Q Consensus 235 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp 314 (560)
+..+++..+...++.|....+....... .+ .......+..+...++..+..+.+||.+||+.||++|||++|+|.||
T Consensus 238 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 238 NEIDQLGRIFELLGTPNEDNWPQAKKLP--LY-TEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred CHHHHHHHHHHHhCCCchhhCcchhhcc--cc-cccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 9999998888888888765433221100 00 00111112223334456788999999999999999999999999999
Q ss_pred cccccccc
Q 008607 315 YFKGLAKV 322 (560)
Q Consensus 315 ~f~~~~~~ 322 (560)
||+.....
T Consensus 315 ~~~~~~~~ 322 (335)
T PTZ00024 315 YFKSDPLP 322 (335)
T ss_pred ccCCCCCC
Confidence 99876443
No 153
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.1e-42 Score=346.65 Aligned_cols=281 Identities=43% Similarity=0.737 Sum_probs=233.4
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|++.+.||+|.||.||+|.+..+++.||+|++............+.+|+.+++.++|+||+++++++... ..+|+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTE-----RKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcC-----CceEE
Confidence 6788999999999999999999999999999976443344456778899999999999999999988543 46899
Q ss_pred EEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 105 VFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 105 V~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
|+||++++|.+++... ..+++..++.++.||+.||+|||++||+||||+|+||+++.++.+||+|||+++.......
T Consensus 76 v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 76 VFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred EecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 9999999999999876 5799999999999999999999999999999999999999999999999999976533221
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
......++..|+|||.+.+. ..++.++|||||||++++|++|++||.+.+....+..+...++.+....+..+....
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 230 (282)
T cd07829 154 -TYTHEVVTLWYRAPEILLGS-KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP- 230 (282)
T ss_pred -ccCccccCcCcCChHHhcCC-cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc-
Confidence 12345668889999998652 378899999999999999999999999999999999999999988877665443321
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.+-..+...........++..+..+.+||++||..||++||++++++.||||
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 231 -DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred -cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 1111112222223334556678899999999999999999999999999998
No 154
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3e-42 Score=357.98 Aligned_cols=257 Identities=22% Similarity=0.393 Sum_probs=204.3
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..+ +|+||+.+++++... ..+|+||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTT-----SRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeC-----CEEEEEE
Confidence 479999999999999999999999999975322 223455678999999888 599999999988443 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+. ++|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 76 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---~~ 152 (327)
T cd05617 76 EYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---DT 152 (327)
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC---Cc
Confidence 9998 5999999888889999999999999999999999999999999999999999999999999987532211 11
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.......... .. ..
T Consensus 153 ~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~---------~~-----------~~ 210 (327)
T cd05617 153 TSTFCGTPNYIAPEILRG--EEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN---------TE-----------DY 210 (327)
T ss_pred eecccCCcccCCHHHHCC--CCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc---------cH-----------HH
Confidence 245689999999999976 578999999999999999999999996432111000 00 00
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC------HHHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT------AEEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt------a~elL~hp~f~~~ 319 (560)
....+. ..+.. ....++..+.+||++||..||.+|++ +++++.||||+.+
T Consensus 211 ~~~~~~-~~~~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 211 LFQVIL-EKPIR---IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHHHHH-hCCCC---CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 000111 11111 12356888999999999999999998 5799999999865
No 155
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.5e-41 Score=338.19 Aligned_cols=254 Identities=28% Similarity=0.467 Sum_probs=210.0
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|++.+.||+|++|.||++.+..+++.||+|++............+.+|+++++.++|+|++++++.+... ...+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE----DGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC----CCEEE
Confidence 49999999999999999999999999999999975444444556788999999999999999998876322 23589
Q ss_pred EEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||++ ++|.+++... ..+++..++.++.||+.||.+||++||+||||||+||+++.++.++|+|||++.......
T Consensus 77 lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 9999998 5899988763 358999999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ......+++.|+|||++.+ ..++.++|||||||++++|++|+.||.+.+.......+..
T Consensus 157 ~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~--------------- 216 (257)
T cd08223 157 D---MASTLIGTPYYMSPELFSN--KPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIE--------------- 216 (257)
T ss_pred C---ccccccCCcCccChhHhcC--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHh---------------
Confidence 1 2244578999999999876 5788899999999999999999999987664333222111
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. . ........++.+.+||.+||+.||.+|||+.++|+||||
T Consensus 217 --------~---~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 217 --------G---K----LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred --------c---C----CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0 0 011123567899999999999999999999999999997
No 156
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.5e-42 Score=389.64 Aligned_cols=264 Identities=27% Similarity=0.409 Sum_probs=213.5
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
-..-++|++++.||+|+||+||+|.+..++..||+|++............+.+|+.+|+.|+|||||+++++|....
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~--- 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA--- 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC---
Confidence 33446899999999999999999999999999999998755445556678899999999999999999999886432
Q ss_pred CccEEEEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-------CeeeccCCCCCeeeCC-----
Q 008607 99 FKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTA-------NVFHRDLKPKNILANA----- 161 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~-------gIiHrDLKP~NILl~~----- 161 (560)
...+||||||+. ++|.++|.. .+.+++..++.|+.||+.||.|||+. +|+||||||+||||+.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 246899999998 599998865 35799999999999999999999985 4999999999999964
Q ss_pred ------------CCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCC
Q 008607 162 ------------DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKP 229 (560)
Q Consensus 162 ------------~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~ 229 (560)
.+.+||+|||++....... .....+||+.|+|||++.+....++.++||||||||||+|++|+.
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~ 241 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 3458999999997653222 123467999999999986433468899999999999999999999
Q ss_pred CCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHH
Q 008607 230 LFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEE 309 (560)
Q Consensus 230 pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~e 309 (560)
||...+...++..+. ...... .....+..+.+||.+||.+||.+||++.|
T Consensus 242 PF~~~~~~~qli~~l--------------------------k~~p~l----pi~~~S~eL~dLI~~~L~~dPeeRPSa~Q 291 (1021)
T PTZ00266 242 PFHKANNFSQLISEL--------------------------KRGPDL----PIKGKSKELNILIKNLLNLSAKERPSALQ 291 (1021)
T ss_pred CCCcCCcHHHHHHHH--------------------------hcCCCC----CcCCCCHHHHHHHHHHhcCChhHCcCHHH
Confidence 997655433321111 111111 12346788999999999999999999999
Q ss_pred HhcCcccccc
Q 008607 310 ALADPYFKGL 319 (560)
Q Consensus 310 lL~hp~f~~~ 319 (560)
+|.|+||+.+
T Consensus 292 lL~h~~ik~i 301 (1021)
T PTZ00266 292 CLGYQIIKNV 301 (1021)
T ss_pred HhccHHHhhc
Confidence 9999999744
No 157
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=5.2e-42 Score=348.96 Aligned_cols=258 Identities=26% Similarity=0.415 Sum_probs=207.2
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.|++.++||+|+||.||++.+..+++.||+|++..... .......+.+|+.+|+.++|++|+.+++.+... ..+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~ 75 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETK-----DAL 75 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecC-----CEE
Confidence 37889999999999999999999999999999864322 222335577899999999999999999888433 468
Q ss_pred EEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|+||||+. ++|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++.++.++|+|||++......
T Consensus 76 ~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 76 CLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred EEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999998 58988886533 5999999999999999999999999999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. ....+|+..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+.
T Consensus 156 ~~----~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~--------------- 214 (285)
T cd05630 156 QT----IKGRVGTVGYMAPEVVKN--ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVE--------------- 214 (285)
T ss_pred cc----ccCCCCCccccChHHHcC--CCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHH---------------
Confidence 21 133579999999999976 578999999999999999999999997643211111110
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGL 319 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~ 319 (560)
..+.... . .....+++.+.+||++||+.||.+||| ++|+++||||+++
T Consensus 215 -----~~~~~~~----~---~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 215 -----RLVKEVQ----E---EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred -----hhhhhhh----h---hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 0111000 0 112356788999999999999999999 9999999999864
No 158
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=5.1e-42 Score=350.30 Aligned_cols=289 Identities=38% Similarity=0.654 Sum_probs=228.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC-----c
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-----R 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~-----~ 96 (560)
.++|++.+.||+|+||.||+|.++.+|+.||||+++...........+.+|+.+++.++||||+++++++.... .
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhcc
Confidence 46799999999999999999999999999999998754333334456778999999999999999999886543 1
Q ss_pred CCCccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 97 REFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 97 ~~~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
.+...+|+|+||++++|...+... ..++++.++.++.||+.||+|||++||+|+||||+||+++.++.+||+|||++..
T Consensus 86 ~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~ 165 (302)
T cd07864 86 KDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARL 165 (302)
T ss_pred ccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccccc
Confidence 123378999999999988888764 3699999999999999999999999999999999999999999999999999976
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
....... ......++..|+|||.+.+. ..++.++|||||||++++|++|++||...+....+..+.+..+.+....+
T Consensus 166 ~~~~~~~--~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 166 YNSEESR--PYTNKVITLWYRPPELLLGE-ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVW 242 (302)
T ss_pred ccCCccc--ccccceeccCccChHHhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhc
Confidence 5433221 11234567889999988542 35788999999999999999999999999988888888888887776544
Q ss_pred HHhhhHHHHHHHHhhcc--CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 256 ARVRNEKARRYLSSMRK--KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..+.... +...... .........+..++..+.+||.+||..||.+|||++++|.||||
T Consensus 243 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 243 PDVIKLP---YFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred ccccccc---cccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 3221110 0000000 00011122344568899999999999999999999999999997
No 159
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.9e-42 Score=373.39 Aligned_cols=257 Identities=24% Similarity=0.325 Sum_probs=211.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCC-CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRT-GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~t-g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
..|.+.+.||+|++|.||+|.+..+ +..||+|++.. ........+.+|+.+|+.++||||+++++.+... ..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~--~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~-----~~ 139 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVML--NDERQAAYARSELHCLAACDHFGIVKHFDDFKSD-----DK 139 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEEC-----CE
Confidence 3499999999999999999998887 78899998743 2334455678899999999999999999998543 46
Q ss_pred EEEEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 102 IYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+||||||++ |+|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 140 ~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred EEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 999999998 589887753 346899999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
..... .......+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+...
T Consensus 220 ~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~---------- 286 (478)
T PTZ00267 220 SDSVS-LDVASSFCGTPYYLAPELWER--KRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYG---------- 286 (478)
T ss_pred CCccc-cccccccCCCccccCHhHhCC--CCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC----------
Confidence 33221 112345679999999999976 57899999999999999999999999877654443332210
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.. ......+++.+.+||.+||..||++||+++++|.|+|++.+
T Consensus 287 -----------------~~---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 287 -----------------KY---DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred -----------------CC---CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 00 01123567889999999999999999999999999998753
No 160
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.2e-41 Score=344.15 Aligned_cols=282 Identities=40% Similarity=0.653 Sum_probs=224.9
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc---CCCCccccceeecCCCcCCCcc
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL---RHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l---~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
|++.+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.+ .|+||+++++++..........
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 7899999999999999999999999999999975433333345567888888766 4999999999987654333445
Q ss_pred EEEEEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++++|||+.++|.+++.... .+++..++.++.||+.||+|||+.+|+|+||+|+|||++.++.+||+|||++......
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 89999999999999887643 5899999999999999999999999999999999999999999999999999775333
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. .....++..|+|||.+.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.+..+.+....+....
T Consensus 161 ~~----~~~~~~~~~~~~PE~~~~--~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 161 MA----LTSVVVTLWYRAPEVLLQ--SSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred cc----cccccccccccChHHhcc--CCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCc
Confidence 21 133467889999999976 568889999999999999999999999999888888887776655443221111
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
... ...........+....+..++.+.+||.+||+.||.+||+++|+|.||||
T Consensus 235 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 235 SLP----RSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccc----hhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 000 00111122222334445667889999999999999999999999999998
No 161
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.3e-41 Score=349.90 Aligned_cols=283 Identities=24% Similarity=0.379 Sum_probs=214.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.|++.+.||+|+||.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++... ..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 74 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYSD-----GEI 74 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC-----CEE
Confidence 36999999999999999999999999999999987432 233456688999999999999999999998543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|+||||+++ +|.+++...+.+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++.......
T Consensus 75 ~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 75 SICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred EEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 999999984 999999888889999999999999999999997 599999999999999999999999999987543221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH-----
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI----- 255 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~----- 255 (560)
....+++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+.......+............
T Consensus 155 -----~~~~~~~~~~~aPE~~~~--~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 155 -----ANSFVGTRSYMSPERLQG--THYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred -----cccCCCCcCccChhHhcC--CCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccccc
Confidence 134678999999999876 56889999999999999999999999876643322222111000000000
Q ss_pred ----HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 256 ----ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 256 ----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
..............+....+.. .....++..+.+||.+||..||++|||++|+++||||.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~ 294 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPK--LPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAE 294 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCcc--CcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcc
Confidence 0000000011111111111110 11123678899999999999999999999999999998653
No 162
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=6.4e-42 Score=345.79 Aligned_cols=283 Identities=40% Similarity=0.696 Sum_probs=227.9
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|++.+.||.|+||.||+|.+..+|+.+|+|++............+.+|+.+++.++|+|++++++++.... ...+|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEE
Confidence 78999999999999999999999999999999864433444567889999999999999999999985431 256899
Q ss_pred EEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 105 VFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 105 V~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
|+||++++|.+++... ..+++..++.++.||+.||+|||+.|++|+||||+|||++.++.+||+|||++........
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 78 VFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred EeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 9999999999998765 5799999999999999999999999999999999999999999999999999986543321
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
...+...++..|+|||.+.+. ..++.++|||||||++|+|++|+.||.+.+....+..+.+..+.+....+.....-
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 232 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGA-TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL-- 232 (287)
T ss_pred ccccccccccccCCceeeEcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc--
Confidence 112345678899999987542 45789999999999999999999999999988888888888887766554332211
Q ss_pred HHHHHhhccCC--CCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 264 RRYLSSMRKKK--PIPFSQKFPN-ANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 264 ~~~l~~~~~~~--~~~~~~~~~~-~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.+........ +..+...+.. .++.+.++|++||..||.+||+++++++||||
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 233 -PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred -hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 0001110000 0011122333 38899999999999999999999999999997
No 163
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=1.8e-43 Score=332.18 Aligned_cols=290 Identities=30% Similarity=0.586 Sum_probs=234.6
Q ss_pred ccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCC
Q 008607 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPP 94 (560)
Q Consensus 16 ~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~ 94 (560)
..+||..+.|++++++|+|.|+.||.|++..+.++++||+++. -....|.||++||+.|+ ||||+.++++..++
T Consensus 31 ~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-----VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp 105 (338)
T KOG0668|consen 31 VIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-----VKKKKIKREIKILQNLRGGPNIIKLLDIVKDP 105 (338)
T ss_pred eeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-----HHHHHHHHHHHHHHhccCCCCeeehhhhhcCc
Confidence 3468999999999999999999999999999999999999863 45677899999999998 99999999998765
Q ss_pred CcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccc
Q 008607 95 SRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGL 172 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGl 172 (560)
.. ....+||||+.. |...+.. .|+.-.++.+++|||.||.|||+.||+|||+||.|++||.. ..++|+||||
T Consensus 106 ~S---ktpaLiFE~v~n~Dfk~ly~---tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGL 179 (338)
T KOG0668|consen 106 ES---KTPSLIFEYVNNTDFKQLYP---TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGL 179 (338)
T ss_pred cc---cCchhHhhhhccccHHHHhh---hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecch
Confidence 43 346899999996 6655553 48888999999999999999999999999999999999975 4699999999
Q ss_pred cccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCC-CCCCChhhHHHHHHHhcCCCC
Q 008607 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 173 a~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~p-F~~~~~~~~~~~i~~~~g~p~ 251 (560)
|..+..+..- .-.+.++.|--||+|... ..|+.+-|+|||||+|+.|+..+.| |.|.+..+|+-+|.+++|+-.
T Consensus 180 AEFYHp~~eY----nVRVASRyfKGPELLVdy-~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~e 254 (338)
T KOG0668|consen 180 AEFYHPGKEY----NVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDE 254 (338)
T ss_pred HhhcCCCcee----eeeeehhhcCCchheeec-hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHH
Confidence 9987655432 446889999999999874 6799999999999999999998855 678999999999999999864
Q ss_pred HHHH-HHhhhHHHHHHHHhhccCCCCCCCCCC-----CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 252 PEAI-ARVRNEKARRYLSSMRKKKPIPFSQKF-----PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 252 ~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.... .+..-+-...|-+-+......+|.... .-++++++|||.++|..|-.+|+||.|++.||||..+..
T Consensus 255 l~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~ 330 (338)
T KOG0668|consen 255 LYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVRE 330 (338)
T ss_pred HHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHH
Confidence 4322 222211112222222222233333222 235799999999999999999999999999999986543
No 164
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7e-42 Score=346.40 Aligned_cols=252 Identities=25% Similarity=0.390 Sum_probs=199.6
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcccC-hhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~-~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||+|+||.||++.++.+|+.||+|++...... ......+..|+++|+.++||||+++++++.. ...+|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFES-----KTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEec-----CCeEEEEEecC
Confidence 79999999999999999999999998642221 2223445679999999999999999998843 34689999999
Q ss_pred C-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 110 E-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 110 ~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
. ++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++....... ..
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~----~~ 151 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK----TI 151 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc----ee
Confidence 8 58988886543 58899999999999999999999999999999999999999999999999987653322 12
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
....|+..|+|||++.+ ..++.++|||||||++|+|++|+.||.+.........+. ...
T Consensus 152 ~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~-------------------~~~ 210 (277)
T cd05607 152 TQRAGTNGYMAPEILKE--EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELK-------------------RRT 210 (277)
T ss_pred eccCCCCCccCHHHHcc--CCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHH-------------------HHh
Confidence 34578999999999976 468999999999999999999999997643211100000 000
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCcccccc
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA----EEALADPYFKGL 319 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta----~elL~hp~f~~~ 319 (560)
+ ... .......+++.+.+||.+||+.||.+||++ ++++.||||+.+
T Consensus 211 ~---~~~----~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 211 L---EDE----VKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred h---ccc----cccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 0 000 011123578899999999999999999999 778899999875
No 165
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.5e-41 Score=345.31 Aligned_cols=259 Identities=25% Similarity=0.408 Sum_probs=210.1
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.|++.+.||+|+||+||+|.+..+++.||+|++.... ........+.+|+.+|+.++|+||+.+.+.+... ..+
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~-----~~~ 75 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETK-----DAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecC-----CEE
Confidence 4888999999999999999999999999999986432 2222334577899999999999999998888443 468
Q ss_pred EEEEecCCc-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|+||||+.+ +|..++... ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++......
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 76 CLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred EEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 999999985 888877543 36999999999999999999999999999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. ......|+..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.........+....
T Consensus 156 ~----~~~~~~g~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~------------ 217 (285)
T cd05632 156 E----SIRGRVGTVGYMAPEVLNN--QRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRV------------ 217 (285)
T ss_pred C----cccCCCCCcCccChHHhcC--CCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh------------
Confidence 1 1234579999999999976 578899999999999999999999998766543333222110
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGLA 320 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~~ 320 (560)
. .. . ......+++.+.+||.+||+.||++||+ +.+++.|+||+...
T Consensus 218 --------~---~~-~---~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 218 --------L---ET-E---EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred --------h---cc-c---cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence 0 00 0 0112456788999999999999999999 89999999998753
No 166
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=359.75 Aligned_cols=258 Identities=28% Similarity=0.423 Sum_probs=214.5
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh-hHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-SDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~-~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.--..|.-++.||.|+||-||.|+|..+.+.||||++....... ..-..|+.|+.+|+.|+|||++.+.++|+-..
T Consensus 23 DPEklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~--- 99 (948)
T KOG0577|consen 23 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH--- 99 (948)
T ss_pred CHHHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc---
Confidence 33457888899999999999999999999999999997543332 33467999999999999999999999997543
Q ss_pred CccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..|||||||-|+-.+++.-. .++.+.++..|+.+.|.||+|||+.+.||||||..|||+++.|.|||+|||.|....
T Consensus 100 --TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 100 --TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred --hHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC
Confidence 46999999988555555432 369999999999999999999999999999999999999999999999999997753
Q ss_pred CCCCCcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
. ..+++|||+|||||++... .+.|+-++||||||++..||...++|+...|....+.-|..
T Consensus 178 P-------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQ----------- 239 (948)
T KOG0577|consen 178 P-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----------- 239 (948)
T ss_pred c-------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHh-----------
Confidence 2 2458999999999998532 25699999999999999999999999887776665554432
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
+.+..+. -+.++..+++||..||++-|.+|||.+++|.|+|...
T Consensus 240 ----------------NesPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R 283 (948)
T KOG0577|consen 240 ----------------NESPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLR 283 (948)
T ss_pred ----------------cCCCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhcc
Confidence 1111111 3567889999999999999999999999999999863
No 167
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.7e-41 Score=340.60 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=207.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc---ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..|++.+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++|+||+++++++.... .
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRA---E 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC---C
Confidence 468999999999999999999999999999999864322 2233456889999999999999999999875422 2
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+++|+||+.+ +|.+++...+.+++..++.++.||+.||+|||+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 468999999984 8999998887899999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
............++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........+..+. ..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~---~~~-------- 225 (266)
T cd06651 159 ICMSGTGIRSVTGTPYWMSPEVISG--EGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIA---TQP-------- 225 (266)
T ss_pred ccccCCccccCCccccccCHHHhCC--CCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHh---cCC--------
Confidence 2211111233568889999999876 568899999999999999999999997654332221111 000
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
. ........++.+.+|| +||..||++||+++|+++||||+
T Consensus 226 -------------~-----~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 226 -------------T-----NPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred -------------C-----CCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 0 0011124577888899 67778999999999999999996
No 168
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=5.4e-42 Score=355.67 Aligned_cols=287 Identities=23% Similarity=0.307 Sum_probs=207.6
Q ss_pred EEEEEeec--CCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 27 IEEVIGKG--SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 27 i~~~IG~G--~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
++++||+| +||+||++.++.+|+.||||++............+.+|+.+++.++||||+++++++... ..+|+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~-----~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD-----NELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEEC-----CEEEE
Confidence 57889999 678999999999999999999975443444456678899999999999999999998544 36899
Q ss_pred EEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 105 VFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 105 V~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
||||++ ++|.+++..+ ..+++..++.++.||+.||+|||++||+||||||+|||++.++.++|+|||..........
T Consensus 77 v~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred EEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999998 5899998653 4599999999999999999999999999999999999999999999999987644321111
Q ss_pred C----cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCH-HHHH
Q 008607 182 T----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP-EAIA 256 (560)
Q Consensus 182 ~----~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~-~~~~ 256 (560)
. .......+++..|+|||++.+....|+.++|||||||++|+|++|+.||........+... ..+.... ....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~ 234 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK--LNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH--hcCCcccccccc
Confidence 0 0011224577889999998653246889999999999999999999999875543322221 1111100 0000
Q ss_pred HhhhHHHHHHH------Hhhcc----------CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 257 RVRNEKARRYL------SSMRK----------KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l------~~~~~----------~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
....+...... ..+.. ............+++.+.+||++||+.||++|||++|+|+||||+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~ 314 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 314 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence 00000000000 00000 000001112234578899999999999999999999999999998643
No 169
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1e-41 Score=354.83 Aligned_cols=254 Identities=26% Similarity=0.467 Sum_probs=199.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEE-----CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d-----~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~ 95 (560)
.++|++.++||+|+||.||+|.+ ..+++.||||++... ........+.+|+.+|+.+ +||||+++++++....
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 36899999999999999999975 345678999998743 2233456788999999999 8999999999875322
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHhC------------------------------------------------------
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------ 120 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~~------------------------------------------------------ 120 (560)
..+|+||||++ |+|.+++...
T Consensus 85 ----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 85 ----GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred ----CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 35899999998 5999988753
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccC
Q 008607 121 --------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192 (560)
Q Consensus 121 --------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT 192 (560)
..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++........ .......++
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~-~~~~~~~~~ 239 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKGSARLP 239 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcch-hcccCCCCC
Confidence 23778899999999999999999999999999999999999999999999999865332211 111234466
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhc
Q 008607 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMR 271 (560)
Q Consensus 193 ~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~ 271 (560)
..|+|||++.+ ..++.++|||||||++|||++ |..||.+......+.... .
T Consensus 240 ~~y~aPE~~~~--~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~--------------------------~ 291 (338)
T cd05102 240 LKWMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRL--------------------------K 291 (338)
T ss_pred ccccCcHHhhc--CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHH--------------------------h
Confidence 78999999876 578999999999999999997 999998765332221110 0
Q ss_pred cCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 272 KKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 272 ~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ......+++.+.+||.+||+.||.+|||+.|+++
T Consensus 292 ~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 292 DGTR---MRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred cCCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 0000 0112356788999999999999999999999975
No 170
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=4.4e-41 Score=334.32 Aligned_cols=253 Identities=27% Similarity=0.439 Sum_probs=211.1
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|++.+.||+|++|.||+|.+..+++.|++|.+............+.+|+.+++.++||||+++++.+... ...|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDK-----GKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccC-----CEEE
Confidence 38899999999999999999999999999999875444455667888999999999999999999988543 4689
Q ss_pred EEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||+. ++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.......
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999997 5999999774 468999999999999999999999999999999999999999999999999987654322
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ......++.+|+|||++.+ ..++.++|||||||++++|++|+.||...+.......+..
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------------- 215 (256)
T cd08529 156 N---FANTIVGTPYYLSPELCED--KPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIR--------------- 215 (256)
T ss_pred c---hhhccccCccccCHHHhcC--CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc---------------
Confidence 1 1234578899999999976 5688999999999999999999999987764333222211
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. .......++..+.++|++||+.+|++||++.++++|||+
T Consensus 216 ------------~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 216 ------------GV---FPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred ------------CC---CCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 00 011112567889999999999999999999999999996
No 171
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.5e-41 Score=343.13 Aligned_cols=254 Identities=25% Similarity=0.461 Sum_probs=213.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||++.+..+++.||+|++.... ........+.+|+++|+.+.||||+++++++... ..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDD-----SN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcC-----Ce
Confidence 46999999999999999999999999999999986421 2233456788999999999999999999988443 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+|+||+|.|||++.++.+||+|||++......
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 899999995 699999998889999999999999999999999999999999999999999999999999999765433
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
....++++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+..
T Consensus 155 -----~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--------------- 212 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIILS--KGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILE--------------- 212 (290)
T ss_pred -----CCCCCCCccccChhhhcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---------------
Confidence 134578999999999866 4678899999999999999999999987664332222211
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
.. .. .....+..+.+||++||..||.+|+ +++|+++||||+.+.
T Consensus 213 -----------~~--~~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 213 -----------GK--VR---FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred -----------CC--cc---CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 00 01 1134578899999999999999999 999999999998654
No 172
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=361.03 Aligned_cols=268 Identities=28% Similarity=0.433 Sum_probs=209.3
Q ss_pred ccccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeec
Q 008607 14 DFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILL 92 (560)
Q Consensus 14 ~~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~ 92 (560)
++++. .+..|+++++||+|+.+.||++.... ...||+|++.....+......+.+|+.+|.+|+ |.+||+|+++-+
T Consensus 354 ~~i~V--kg~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 354 EIIKV--KGREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred eeEEE--CcchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 44444 46789999999999999999997543 356777777655566777888999999999997 999999999876
Q ss_pred CCCcCCCccEEEEEecCCccHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccc
Q 008607 93 PPSRREFKDIYVVFELMESDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~gdL~~~i~~~~~-lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFG 171 (560)
.. ..+|||||+-+.||..++++... ++.-.++++.+|+|.|++++|..||||.||||.|+|+- .|.+||+|||
T Consensus 431 ~d-----~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFG 504 (677)
T KOG0596|consen 431 TD-----GYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFG 504 (677)
T ss_pred cC-----ceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeec
Confidence 53 46999999999999999988654 34358999999999999999999999999999999885 6799999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccC---------CCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHH
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFS---------KYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~---------~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~ 242 (560)
.|.....++. .+.....+||+.||+||.+..... +.+.++||||||||||+|+.|++||..- ..++.+
T Consensus 505 IA~aI~~DTT-sI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~--~n~~aK 581 (677)
T KOG0596|consen 505 IANAIQPDTT-SIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQI--INQIAK 581 (677)
T ss_pred hhcccCcccc-ceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHH--HHHHHH
Confidence 9988766554 345567899999999998753211 2567899999999999999999999421 111111
Q ss_pred HHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 243 MTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 243 i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
+..+ -.| ...++|....++ .+++++++.||..||++|||+.|+|+|||+..
T Consensus 582 l~aI-~~P----------------------~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 582 LHAI-TDP----------------------NHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred HHhh-cCC----------------------CccccccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 1111 011 122233222221 23999999999999999999999999999974
No 173
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-43 Score=343.45 Aligned_cols=257 Identities=25% Similarity=0.429 Sum_probs=222.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|.++++||+|.||.|-+++.+.+|+.||||++++.. .........+.|-++|+..+||.+..+...|.+.+ .
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d-----r 242 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD-----R 242 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc-----e
Confidence 56888999999999999999999999999999998643 34455677788999999999999999988886654 5
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||.. |+|+-.+.+...|+++..+++...|+.||.|||+++|+.||||.+|+|+|.+|++||+||||++-..
T Consensus 243 lCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I--- 319 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI--- 319 (516)
T ss_pred EEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc---
Confidence 999999998 5899999888889999999999999999999999999999999999999999999999999997532
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.......++||||.|.|||++.. ..|+.++|.|.+||++|||++|+.||...+....+.+|..-
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleD--nDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~e-------------- 383 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLED--NDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILME-------------- 383 (516)
T ss_pred cccceeccccCChhhcCchhhcc--ccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhh--------------
Confidence 22233467999999999999987 68999999999999999999999999998877776665420
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
.+ .....++++++.||..+|.+||.+|. .+.||.+|+||.++.
T Consensus 384 --------d~---------kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~ 431 (516)
T KOG0690|consen 384 --------DL---------KFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD 431 (516)
T ss_pred --------hc---------cCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence 00 11236799999999999999999996 488999999998753
No 174
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1e-41 Score=342.01 Aligned_cols=260 Identities=26% Similarity=0.413 Sum_probs=209.0
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
...++|++.+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|+.+++.++||||+++++.+...
T Consensus 6 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~----- 78 (267)
T cd06645 6 NPQEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE--PGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRR----- 78 (267)
T ss_pred CcHHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecC--chhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeC-----
Confidence 3446899999999999999999999999999999998643 223445678899999999999999999988443
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+||||++ ++|.+++...+.+++..++.++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.....
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITA 158 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccC
Confidence 46899999998 49999998888999999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCcccccccccCccccccccccc-ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~-~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
... ......|+..|+|||++.. ....++.++|||||||++|+|++|..||........+..+..
T Consensus 159 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~------------ 223 (267)
T cd06645 159 TIA---KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTK------------ 223 (267)
T ss_pred ccc---ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhc------------
Confidence 211 1234578999999998742 124578899999999999999999999865443222211110
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~ 315 (560)
....+ +.......++..+.+||.+||..||++|||++++|+|||
T Consensus 224 -------------~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 224 -------------SNFQP-PKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -------------cCCCC-CcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 00001 111112246778999999999999999999999999998
No 175
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-44 Score=349.98 Aligned_cols=254 Identities=26% Similarity=0.436 Sum_probs=217.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+-|.++++||+|+||.||+|+|+.+|..+|||++.. .++.+.|..||.|++++..|++|++++.|+-. .++
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV----~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~-----sDL 103 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV----DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH-----SDL 103 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc----cchHHHHHHHHHHHHHcCCchhhhhhhhhccC-----Cce
Confidence 347889999999999999999999999999999863 47889999999999999999999999988544 469
Q ss_pred EEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|||||||+ |++.++++.+ ..|+++++..+++..|.||+|||...-||||||..|||+|.+|..||+|||.|..+....
T Consensus 104 WIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM 183 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM 183 (502)
T ss_pred EeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH
Confidence 99999999 7999999764 579999999999999999999999999999999999999999999999999997654333
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ...+.+||+.|||||++.. -.|++++||||||++..||..|++||.+-... ..|..+
T Consensus 184 A---KRNTVIGTPFWMAPEVI~E--IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---RAIFMI-------------- 241 (502)
T KOG0574|consen 184 A---KRNTVIGTPFWMAPEVIEE--IGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---RAIFMI-------------- 241 (502)
T ss_pred H---hhCccccCcccccHHHHHH--hccchhhhHhhhcchhhhhhcCCCCccccccc---ceeEec--------------
Confidence 2 2367899999999999987 58999999999999999999999999653322 222211
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
...|.+.......++.++.|||++||.+.|++|-||-++++|||+++
T Consensus 242 -----------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn 288 (502)
T KOG0574|consen 242 -----------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKN 288 (502)
T ss_pred -----------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence 12233333444567889999999999999999999999999999985
No 176
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-42 Score=338.32 Aligned_cols=275 Identities=25% Similarity=0.400 Sum_probs=219.6
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEEEEe
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
+.||+|+|+.|-.+....||..||||+|.+.- .-...++.||++++.+.+ |+||++++++| ++...+|||||
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--gHsR~RvfREVe~f~~Cqgh~nilqLiefF-----Edd~~FYLVfE 156 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--GHSRSRVFREVETFYQCQGHKNILQLIEFF-----EDDTRFYLVFE 156 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC--chHHHHHHHHHHHHHHhcCCccHHHHHHHh-----cccceEEEEEe
Confidence 68999999999999999999999999998753 234678999999999997 99999999998 44456999999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC---cEEEecccccccccCCCC--
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFGLARVAFNDTP-- 181 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~---~lKL~DFGla~~~~~~~~-- 181 (560)
-|. |.|...|.++..|+|.++..++..|+.||+|||.+||.||||||+|||..... -||||||.|+....-..+
T Consensus 157 Km~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s 236 (463)
T KOG0607|consen 157 KMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS 236 (463)
T ss_pred cccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC
Confidence 998 58999999999999999999999999999999999999999999999987654 489999999865322111
Q ss_pred --CcccccccccCcccccccccc---cccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 182 --TAIFWTDYVATRWYRAPELCG---SFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 182 --~~~~~~~~~gT~~Y~APEll~---~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
....+.+.||+-.|||||+.. +....|+.+.|+||||||+|.||+|.+||.|....+. |.-..+...
T Consensus 237 pastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC--------GWdrGe~Cr 308 (463)
T KOG0607|consen 237 PASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC--------GWDRGEVCR 308 (463)
T ss_pred CCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC--------CccCCCccH
Confidence 112235678999999999753 3346799999999999999999999999998653221 111111111
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
.. -..++.++.....-.....|..+|.+++|||.++|..|+..|.++.++|+|||++.....
T Consensus 309 ~C----Q~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 309 VC----QNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HH----HHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 11 123444554444444455677889999999999999999999999999999999976543
No 177
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=7.5e-41 Score=344.65 Aligned_cols=262 Identities=26% Similarity=0.441 Sum_probs=213.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC-hhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH-VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~-~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|.+..+++.||||.+...... ......+.+|+++|+.++|+||+++++.+.. ...
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQT-----ETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeec-----CCE
Confidence 4799999999999999999999999999999998753222 2345678899999999999999999998743 346
Q ss_pred EEEEEecCCc-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+|+||||+.+ +|.+++... ..+++..++.++.||+.||+|||+.||+|+||||+|||++.++.++|+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 8999999985 999998764 4699999999999999999999999999999999999999999999999999875432
Q ss_pred CCCC--------------------------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCC
Q 008607 179 DTPT--------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (560)
Q Consensus 179 ~~~~--------------------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~ 232 (560)
.... .......+||..|+|||++.+ ..++.++|||||||++|+|++|+.||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~l~~g~~pf~ 233 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG--DGHGSAVDWWTLGILLYEMLYGTTPFK 233 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC--CCCCchHHHHHHHHHHHHHhhCCCCCC
Confidence 2110 001123578999999999976 568899999999999999999999998
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC----HH
Q 008607 233 GKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT----AE 308 (560)
Q Consensus 233 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt----a~ 308 (560)
+.+....+..+.. .. ..+. ....++..+.+||++||..||++||| ++
T Consensus 234 ~~~~~~~~~~~~~--------------------------~~--~~~~-~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~ 284 (316)
T cd05574 234 GSNRDETFSNILK--------------------------KE--VTFP-GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAA 284 (316)
T ss_pred CCchHHHHHHHhc--------------------------CC--ccCC-CccccCHHHHHHHHHHccCCHhHCCCchhhHH
Confidence 8775444332211 00 0111 11236889999999999999999999 99
Q ss_pred HHhcCccccccc
Q 008607 309 EALADPYFKGLA 320 (560)
Q Consensus 309 elL~hp~f~~~~ 320 (560)
|+|.||||++..
T Consensus 285 ~ll~~~~~~~~~ 296 (316)
T cd05574 285 EIKQHPFFRGVN 296 (316)
T ss_pred HHHcCchhhcCC
Confidence 999999998754
No 178
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=6.5e-41 Score=341.28 Aligned_cols=263 Identities=24% Similarity=0.391 Sum_probs=211.5
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
...+.|++++.||.|+||.||+|.+..++..|++|.+... .......+.+|+.+++.++|+||+++++.+...
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYWD----- 81 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeC-----
Confidence 4457899999999999999999999999999999998642 334566788999999999999999999988543
Q ss_pred ccEEEEEecCCc-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 100 KDIYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..+|+||||+++ +|..++.+ ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++....
T Consensus 82 ~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 161 (292)
T cd06644 82 GKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNV 161 (292)
T ss_pred CeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecc
Confidence 368999999985 77777654 4568999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
.... ......++..|+|||++.+. ...++.++|||||||++|+|++|.+||...+....+..+..
T Consensus 162 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~--------- 229 (292)
T cd06644 162 KTLQ---RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--------- 229 (292)
T ss_pred cccc---ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc---------
Confidence 2211 12345688999999998421 14578899999999999999999999976554332221111
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.. .+.......++..+.+||.+||..||++||+++++|+||||..+.
T Consensus 230 ------------------~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 276 (292)
T cd06644 230 ------------------SE-PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT 276 (292)
T ss_pred ------------------CC-CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence 00 011112345678899999999999999999999999999998654
No 179
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=5.1e-41 Score=339.44 Aligned_cols=280 Identities=42% Similarity=0.728 Sum_probs=226.1
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
|++.+.||+|++|.||+|.+..+++.|+||++...... .......+|+..++.++ |+||+++++++.. ....|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~-----~~~~~ 74 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE-----NDELY 74 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc-----CCcEE
Confidence 78899999999999999999999999999998754332 23334567999999999 9999999998854 34689
Q ss_pred EEEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 104 VVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
+||||+.++|.+.+.... .+++..+..++.||+.||.|||++||+|+||+|+||+++.++.++|+|||++........
T Consensus 75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (283)
T cd07830 75 FVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP 154 (283)
T ss_pred EEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC
Confidence 999999989999998765 789999999999999999999999999999999999999999999999999976533221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.....++..|+|||.+.+. ..++.++|+|||||++++|++|++||.+.+..+.+..+...++.|....+......
T Consensus 155 ----~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 ----YTDYVSTRWYRAPEILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred ----cCCCCCcccccCceeeecC-cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhh
Confidence 2446789999999988542 45788999999999999999999999999999999999999998876544322110
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. ...-..+....+......++..+..+.+||++||+.||.+|||++|++.||||
T Consensus 230 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 230 A-SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred h-ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 0 00000011111122223344557889999999999999999999999999997
No 180
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.7e-41 Score=342.19 Aligned_cols=261 Identities=27% Similarity=0.461 Sum_probs=213.2
Q ss_pred cccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 17 ~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
+.-+...+|++.+.||+|+||.||+|++..++..||+|.+.... ......+.+|+.+++.+.|+||+++++.+...
T Consensus 14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~-- 89 (296)
T cd06654 14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--QPKKELIINEILVMRENKNPNIVNYLDSYLVG-- 89 (296)
T ss_pred ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--cchHHHHHHHHHHHHhCCCCCEeeEEEEEEeC--
Confidence 33445579999999999999999999999999999999987432 23456788999999999999999999988543
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...|+||||+.+ +|.+++.. ..+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++..
T Consensus 90 ---~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~ 165 (296)
T cd06654 90 ---DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQ 165 (296)
T ss_pred ---CEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchh
Confidence 368999999984 89998865 4689999999999999999999999999999999999999999999999999876
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ......+++.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+....+..+..
T Consensus 166 ~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~---------- 230 (296)
T cd06654 166 ITPEQS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT---------- 230 (296)
T ss_pred cccccc---ccCcccCCccccCHHHHcC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhc----------
Confidence 432221 1234578899999999876 5678999999999999999999999987654332221110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
. ..+.......+++.+.+||.+||..||.+|||+.++++||||..
T Consensus 231 ----------------~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 231 ----------------N--GTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred ----------------C--CCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 0 00111122456788999999999999999999999999999975
No 181
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.7e-41 Score=340.82 Aligned_cols=261 Identities=24% Similarity=0.427 Sum_probs=210.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++++.||+|+||.||+|.+..+|..||+|.+.... .......+.+|+.+|+.++|+||+++++.+... ..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~ 74 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFIE-----GAV 74 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecC-----CeE
Confidence 36899999999999999999999999999999986432 333456788999999999999999999987543 468
Q ss_pred EEEEecCCc-cHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 103 YVVFELMES-DLHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~---~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
|+||||+++ +|..++... ..+++..++.++.||+.||.|||+ .||+||||||+|||++.++.+||+|||++....
T Consensus 75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 154 (286)
T cd06622 75 YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLV 154 (286)
T ss_pred EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999999985 888888763 369999999999999999999997 599999999999999999999999999987543
Q ss_pred CCCCCcccccccccCccccccccccccc----CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFF----SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~----~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
... .....++..|+|||++.+.. ..++.++|||||||++|+|++|+.||...........+...
T Consensus 155 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~------- 222 (286)
T cd06622 155 ASL-----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAI------- 222 (286)
T ss_pred CCc-----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHH-------
Confidence 221 13356888999999985421 23578999999999999999999999765433322222111
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.... .....+.++..+.+||.+||..||.+||++++++.||||.....
T Consensus 223 -----------------~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 223 -----------------VDGD---PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred -----------------hhcC---CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 1111 11223457899999999999999999999999999999987653
No 182
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=8.8e-41 Score=333.90 Aligned_cols=262 Identities=26% Similarity=0.429 Sum_probs=211.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||.|+||+||+|.+..++..+++|++....... ....+.+|+.+|+.++|+||+++++.+.. ....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 74 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV-----GDEL 74 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee-----CCEE
Confidence 46999999999999999999999999999999986433222 56778999999999999999999998743 3468
Q ss_pred EEEEecCCc-cHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 103 YVVFELMES-DLHQVIKAN---DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~---~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
|+|||++.+ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+||++++++.+||+|||++.....
T Consensus 75 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~ 154 (267)
T cd06610 75 WLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD 154 (267)
T ss_pred EEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence 999999985 899998764 4589999999999999999999999999999999999999999999999999977644
Q ss_pred CCCCc-ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~-~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..... ......+++..|+|||.+... ..++.++|+|||||++++|++|+.||...+....+..+.. .
T Consensus 155 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~---~-------- 222 (267)
T cd06610 155 GGDRTRKVRKTFVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ---N-------- 222 (267)
T ss_pred CccccccccccccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc---C--------
Confidence 32221 112345789999999998662 3678899999999999999999999976654332222111 0
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..........+..+++.+.+||.+||..||.+|||++++++||||
T Consensus 223 --------------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 223 --------------DPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred --------------CCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 000111111234678899999999999999999999999999998
No 183
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.5e-40 Score=333.41 Aligned_cols=260 Identities=26% Similarity=0.453 Sum_probs=208.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc---ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..|++.++||+|+||.||++.+..+|..||||++..... .......+.+|+.+++.++|+||+++++.+.... .
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPM---E 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCC---C
Confidence 579999999999999999999999999999999863221 1233567889999999999999999999874322 2
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+||||++ ++|.+++.....+++..+..++.||+.||.|||+.+|+|+||||+|||++.++.+||+|||+++....
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~ 158 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQT 158 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence 35889999998 48999998877899999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
............++..|+|||++.+ ..++.++|||||||++|+|++|+.||.+......+..+. ..+
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~-------- 225 (265)
T cd06652 159 ICLSGTGMKSVTGTPYWMSPEVISG--EGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQP-------- 225 (265)
T ss_pred ccccccccccCCCCccccChhhhcC--CCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCC--------
Confidence 2111111234568899999999876 568899999999999999999999997654332221111 100
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
. ........+..+.++|.+||. +|++||+++|+++|||+.
T Consensus 226 ----------------~--~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 226 ----------------T--NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred ----------------C--CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 0 011123557789999999995 999999999999999984
No 184
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.9e-41 Score=337.74 Aligned_cols=259 Identities=25% Similarity=0.400 Sum_probs=207.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
..+.|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++.+... .
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~-----~ 79 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLE--PGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSR-----E 79 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecC--ccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeC-----C
Confidence 346799999999999999999999999999999998642 223445678999999999999999999988543 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+||||++ ++|.+++...+.+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++......
T Consensus 80 ~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 80 KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 6899999998 489999988888999999999999999999999999999999999999999999999999999765322
Q ss_pred CCCcccccccccCccccccccccc-ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~-~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.. ......++..|+|||.+.. ....++.++|||||||++|+|++|+.||...+.......+..
T Consensus 160 ~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~------------- 223 (267)
T cd06646 160 IA---KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSK------------- 223 (267)
T ss_pred cc---ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeec-------------
Confidence 11 1134578899999998742 124577899999999999999999999965443221111100
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~ 315 (560)
....+ +.......++..+.+||++||..||.+|||++++|+|+|
T Consensus 224 ------------~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 224 ------------SNFQP-PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred ------------CCCCC-CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 00000 111112346789999999999999999999999999987
No 185
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.5e-40 Score=338.15 Aligned_cols=262 Identities=25% Similarity=0.421 Sum_probs=209.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.++|++.+.||+|+||.||+|.+..+++.+|+|.+... ......+.+|+.+++.+ +|||++++++++.........
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~---~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 97 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI---SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGG 97 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc---ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCC
Confidence 57799999999999999999999999999999998642 12345677899999998 799999999998755433345
Q ss_pred cEEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 101 DIYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++..
T Consensus 98 ~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~ 177 (291)
T cd06639 98 QLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQ 177 (291)
T ss_pred eeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchh
Confidence 68999999985 88888753 45689999999999999999999999999999999999999999999999999876
Q ss_pred ccCCCCCcccccccccCccccccccccccc---CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFF---SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~---~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~ 252 (560)
....... .....++..|+|||.+.... ..++.++|||||||++|+|++|++||...+....+..+..
T Consensus 178 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~------- 247 (291)
T cd06639 178 LTSTRLR---RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR------- 247 (291)
T ss_pred ccccccc---ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc-------
Confidence 5322211 13356889999999975421 1367899999999999999999999977654333222111
Q ss_pred HHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
... +.......++..+.+||.+||+.||.+||++.|+|+||||+
T Consensus 248 --------------------~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 248 --------------------NPP-PTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred --------------------CCC-CCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 000 00111234567899999999999999999999999999995
No 186
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=7.5e-41 Score=335.36 Aligned_cols=256 Identities=27% Similarity=0.491 Sum_probs=208.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh-------hHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-------SDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~-------~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
+|.+.+.||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+...
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDA-- 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeC--
Confidence 5888999999999999999999999999999886432221 1225678999999999999999999987443
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...++||||+++ +|.+++...+.+++..++.++.||+.||.|||++||+||||+|+|||++.++.+||+|||+++.
T Consensus 79 ---~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 79 ---DHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred ---CccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 468999999985 8999998888899999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCc---ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 008607 176 AFNDTPTA---IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 176 ~~~~~~~~---~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~ 252 (560)
........ .......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||.+.+....+..+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------- 226 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQ--TSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE------- 226 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhcc--CCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-------
Confidence 64221111 11123468889999999876 5678899999999999999999999987554332221111
Q ss_pred HHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. .........+..+.+||++||+.||.+||++.|+++||||
T Consensus 227 --------------------~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 227 --------------------N---ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred --------------------c---CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 0 0111223567889999999999999999999999999997
No 187
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=4e-41 Score=338.25 Aligned_cols=260 Identities=23% Similarity=0.416 Sum_probs=207.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCC-C
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRRE-F 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~-~ 99 (560)
.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+.+|+.+++.+ +|+||+++++.+....... .
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC---ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 467999999999999999999999999999999986432 2345678899999998 6999999999986543221 2
Q ss_pred ccEEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 100 KDIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+||||+. ++|.+++... ..+++..++.++.||+.||+|||+.+|+||||||+||+++.++.+||+|||++...
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~ 161 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 161 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence 46899999998 4899988763 36899999999999999999999999999999999999999999999999998764
Q ss_pred cCCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
..... ......|+..|+|||++.+. ...++.++|||||||++|+|++|+.||...........+.
T Consensus 162 ~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~--------- 229 (272)
T cd06637 162 DRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP--------- 229 (272)
T ss_pred ccccc---cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHh---------
Confidence 32211 12446789999999998531 1357889999999999999999999996544322111110
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.... .......++..+.+||.+||..||.+|||+.+++.||||
T Consensus 230 ------------------~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 230 ------------------RNPA--PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred ------------------cCCC--CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0000 001123467889999999999999999999999999997
No 188
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.8e-41 Score=354.56 Aligned_cols=261 Identities=28% Similarity=0.466 Sum_probs=224.4
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.-.-|.+.+.||+|.|++|.+|++..|+..||||.|++...+......+.+|+++|+.|.|||||+++.++.+. .
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~-----~ 128 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETE-----A 128 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeec-----c
Confidence 34569999999999999999999999999999999998877777778899999999999999999999998554 3
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+||||+. |++++++.+++++.+..++.+|.|++.|++|||+.+|+|||||.+|||++.+..+||+|||++......
T Consensus 129 ~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 129 TLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred eeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc
Confidence 6999999997 699999999999999999999999999999999999999999999999999999999999999876533
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. ...++||++.|.|||++.+. ..-++.+|+||+|++||.|+.|.+||.|.+....-..
T Consensus 209 ~----~lqt~cgsppyAaPEl~~g~-~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~r----------------- 266 (596)
T KOG0586|consen 209 L----MLQTFCGSPPYAAPELFNGK-KYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPR----------------- 266 (596)
T ss_pred c----cccccCCCCCccChHhhcCc-ccCCcceehhhhhhhheeeeecccccCCcccccccch-----------------
Confidence 3 34678999999999999884 3446899999999999999999999998774332111
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
.++.+..+++ -++.++.+||++||..+|.+|++.+++..|.|.......
T Consensus 267 ---------vl~gk~rIp~-----~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 267 ---------VLRGKYRIPF-----YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred ---------heeeeecccc-----eeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 1112222222 246778999999999999999999999999998765443
No 189
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.5e-40 Score=331.06 Aligned_cols=253 Identities=28% Similarity=0.501 Sum_probs=213.2
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++++.||.|+||.||.+.+..+++.+++|++............+.+|+.+|+.++|+||+++++++... ..++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDD-----NTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecC-----CeEE
Confidence 69999999999999999999999999999999875544455567788999999999999999999998543 4689
Q ss_pred EEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||+. ++|.+++... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++.......
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred EEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 9999998 5999999775 468999999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ......++..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+....+.. +
T Consensus 156 ~---~~~~~~~~~~y~ape~~~~--~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~------------ 216 (256)
T cd08221 156 S---MAETVVGTPYYMSPELCQG--VKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQ--G------------ 216 (256)
T ss_pred c---cccccCCCccccCHhhcCC--CCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--C------------
Confidence 1 2244678999999999876 4678899999999999999999999987665444333321 0
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. +......++..+.+||.+||..||.+||+++++|+|+|+
T Consensus 217 -------------~---~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 217 -------------N---YTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred -------------C---CCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 0 111124568889999999999999999999999999996
No 190
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-40 Score=340.44 Aligned_cols=262 Identities=29% Similarity=0.502 Sum_probs=214.6
Q ss_pred ccC-CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 18 EYG-EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 18 ~~~-~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
+++ ...+|++.+.||.|+||.||+|++..+|+.|+||.+... .......+.+|+.+++.++|+||+.+++.+...
T Consensus 13 ~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-- 88 (296)
T cd06655 13 SIGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQ--KQPKKELIINEILVMKELKNPNIVNFLDSFLVG-- 88 (296)
T ss_pred hcCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecc--cCchHHHHHHHHHHHHhcCCCceeeeeeeEecC--
Confidence 344 356899999999999999999999999999999998642 223456788999999999999999999988543
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
..+|+|+||+.+ +|..++... .+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++..
T Consensus 89 ---~~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~ 164 (296)
T cd06655 89 ---DELFVVMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQ 164 (296)
T ss_pred ---ceEEEEEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchh
Confidence 468999999985 888877654 699999999999999999999999999999999999999999999999999876
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 165 ~~~~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~--------- 230 (296)
T cd06655 165 ITPEQS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN--------- 230 (296)
T ss_pred cccccc---cCCCcCCCccccCcchhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc---------
Confidence 433221 1134578899999999876 56888999999999999999999999887654433222110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
..+.......+++.+.+||++||..||.+|||+.+++.||||+...
T Consensus 231 -------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 231 -------------------GTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred -------------------CCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 0011122345788999999999999999999999999999998543
No 191
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=8.1e-41 Score=335.00 Aligned_cols=261 Identities=25% Similarity=0.449 Sum_probs=209.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC----hhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH----VSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~----~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
.|+..+.||+|+||.||++.+..+++.||+|++...... ......+.+|+++|+.++|+||+++++++...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCED----- 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccC-----
Confidence 488899999999999999999999999999998643211 12346788999999999999999999998433
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-cEEEeccccccccc
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAF 177 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-~lKL~DFGla~~~~ 177 (560)
..+++||||+.+ +|.+++...+.+++..++.++.||+.||.|||++||+|+||||+||+++.++ .+||+|||++....
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 468999999985 8999998888899999999999999999999999999999999999998876 59999999987654
Q ss_pred CCCCCc-ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTA-IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~-~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... .......++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------- 224 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRG--EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA--------- 224 (268)
T ss_pred cccccCCccccccccccceeCHhHhcc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh---------
Confidence 332111 11123468889999999876 578899999999999999999999997655433332222110
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
... .........++.+.+||.+||..||.+|||+.++|+||||+
T Consensus 225 --------------~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 225 --------------SAT---TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred --------------ccC---CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 000 01112235678899999999999999999999999999985
No 192
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.2e-40 Score=333.69 Aligned_cols=257 Identities=25% Similarity=0.412 Sum_probs=207.9
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc----ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE----HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~----~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
+|++.+.||.|+||.||+|.+ .+|+.+|+|.+..... .......+.+|+.+|+.++|+||+++++.+...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----- 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD----- 74 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC-----
Confidence 588999999999999999986 5789999999864221 122335688999999999999999999988433
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+|+||+.+ +|.+++.+.+.++++.++.++.||+.||+|||+.+|+|+||+|+||+++.++.+||+|||++.....
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 468999999985 9999998888899999999999999999999999999999999999999999999999999875421
Q ss_pred CC---CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 179 DT---PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 179 ~~---~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
.. ..........++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+.......+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 224 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINE--SGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHR-------- 224 (265)
T ss_pred ccccccccccccccCCCccccChhhhcC--CCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhcc--------
Confidence 11 11112234578999999999976 568899999999999999999999997655433222111100
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.........++..+.+||++||..||.+||++.|+|+||||
T Consensus 225 --------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 225 --------------------GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred --------------------CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 00112234578899999999999999999999999999997
No 193
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.3e-41 Score=371.13 Aligned_cols=286 Identities=24% Similarity=0.295 Sum_probs=205.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCC-cEEEEEEe--------------cC-cccChhHHHHHHHHHHHHHhcCCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKI--------------ND-IFEHVSDATRILREIKLLRLLRHPDIV 85 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg-~~vAiK~i--------------~~-~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (560)
.++|++++.||+|+||.||+|..+... ...++|.+ .+ ..........+.+|+.+|+.++|+||+
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 368999999999999999998765432 22222211 11 111222345678999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCCccHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 86 EIKHILLPPSRREFKDIYVVFELMESDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~gdL~~~i~~~~-----~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
++++++... ...|+|++++.++|..++.... ......++.|+.||+.||+|||++||+||||||+|||++
T Consensus 227 ~l~~~~~~~-----~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 227 KIEEILRSE-----ANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN 301 (501)
T ss_pred cEeEEEEEC-----CeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 999998543 3589999999999988875432 244677889999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCC-CCC--CChh
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPG--KNVV 237 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~p-F~~--~~~~ 237 (560)
.++.+||+|||+++....... ......+||..|+|||++.+ ..|+.++|||||||++|||++|..+ |.+ .+..
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE--AFDYGWVGTVATNSPEILAG--DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred CCCCEEEEeCCCceecCcccc--cccccccCCcCCCCchhhcC--CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 999999999999976533221 11234689999999999977 5789999999999999999999854 432 2344
Q ss_pred hHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhcc-CCCCCCCCCC--CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 008607 238 HQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK-KKPIPFSQKF--PNANPLALRLLERMLAFEPKDRPTAEEALADP 314 (560)
Q Consensus 238 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~--~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp 314 (560)
.++..+...++.+..+... . ..+...++....- ..+..+...+ ...+..+.+||.+||++||.+|||+.|+|+||
T Consensus 378 ~~~~~~~~~~~~~~~~~p~-~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp 455 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPD-P-PCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALP 455 (501)
T ss_pred HHHHHHHHhcccChhhcCC-c-HHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhCh
Confidence 5555555555543322111 0 1112223322110 0000111111 13567789999999999999999999999999
Q ss_pred cccc
Q 008607 315 YFKG 318 (560)
Q Consensus 315 ~f~~ 318 (560)
||..
T Consensus 456 ~f~~ 459 (501)
T PHA03210 456 LFSA 459 (501)
T ss_pred hhhc
Confidence 9975
No 194
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1.4e-40 Score=331.81 Aligned_cols=257 Identities=29% Similarity=0.462 Sum_probs=208.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||.|+||.||+|.+..+++.+++|++... .......+.+|+.+++.++||||+++++.+... ..+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~~ 75 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLE--PGDDFEIIQQEISMLKECRHPNIVAYFGSYLRR-----DKL 75 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcC--chhhHHHHHHHHHHHHhCCCCChhceEEEEEeC-----CEE
Confidence 5799999999999999999999999999999998743 223567788999999999999999999987433 468
Q ss_pred EEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|++|||+++ +|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++.++.+||+|||++.......
T Consensus 76 ~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 76 WIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred EEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 999999995 888888776 689999999999999999999999999999999999999999999999999987653322
Q ss_pred CCcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. .....+++..|+|||.+.+. ...++.++|||||||++|+|++|++||.+.+.......+...
T Consensus 156 ~---~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~------------- 219 (262)
T cd06613 156 A---KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKS------------- 219 (262)
T ss_pred h---ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------------
Confidence 1 12345788899999998651 126788999999999999999999999876644433222110
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~ 315 (560)
...+ .........+..+.+||++||..||.+|||+.+++.|+|
T Consensus 220 ------------~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 220 ------------NFPP-PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred ------------cCCC-ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 0000 000111234677999999999999999999999999998
No 195
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.7e-40 Score=330.81 Aligned_cols=255 Identities=33% Similarity=0.530 Sum_probs=211.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||.|+||.||+|.+..++..||+|.+...........++.+|+.+++.++|+||+++++.+.... ...+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRS---NQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCC---CCEEE
Confidence 489999999999999999999999999999998754444556677889999999999999999999875432 24689
Q ss_pred EEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH-----hCCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 104 VVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIH-----TANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLH-----s~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
++|||++ ++|.+++.. ...+++..++.++.||+.||.||| +.+|+|+||||+||+++.++.+||+|||++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999998 589988875 357999999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 174 ~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
........ ......++..|+|||.+.+ ..++.++|+|||||++++|++|+.||.+.+.......+..
T Consensus 158 ~~~~~~~~---~~~~~~~~~~~~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------- 224 (265)
T cd08217 158 KILGHDSS---FAKTYVGTPYYMSPEQLNH--MSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKE-------- 224 (265)
T ss_pred ccccCCcc---cccccccCCCccChhhhcC--CCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhc--------
Confidence 87543321 1244678999999999876 5688899999999999999999999987663332222111
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. ........+..+.+||.+||..||.+|||++++|+|||+
T Consensus 225 -------------------~~---~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 225 -------------------GK---FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred -------------------CC---CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 10 111223567889999999999999999999999999996
No 196
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.4e-40 Score=331.30 Aligned_cols=253 Identities=26% Similarity=0.465 Sum_probs=209.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|+||.||++.+..+|+.||+|.+............+.+|+.+++.++|+||+++++.+.. ....|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEE-----NGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecC-----CCeEE
Confidence 5999999999999999999999999999999987533334455678899999999999999999998843 34689
Q ss_pred EEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||+. ++|.+.+.... .+++..+..|+.||+.||.|||++||+|+||+|+|||++.++.++|+|||++.......
T Consensus 76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999998 48999887643 58999999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.. .....|+..|+|||++.+ ..++.++|+|||||++++|++|+.||...+..+.+..+.. +
T Consensus 156 ~~---~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~------------ 216 (256)
T cd08218 156 EL---ARTCIGTPYYLSPEICEN--RPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--G------------ 216 (256)
T ss_pred hh---hhhccCCccccCHHHhCC--CCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--C------------
Confidence 11 123468889999999876 5678899999999999999999999976655443332211 0
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. ........+..+.+||.+||+.||.+||++.++|+||||
T Consensus 217 ------------~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 217 ------------S----YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ------------C----CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 0 011123567889999999999999999999999999997
No 197
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.7e-40 Score=336.43 Aligned_cols=267 Identities=24% Similarity=0.413 Sum_probs=210.4
Q ss_pred ccccC-CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecC
Q 008607 16 FTEYG-EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLP 93 (560)
Q Consensus 16 ~~~~~-~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~ 93 (560)
|..+. ..++|++.+.||+|+||.||+|.+..+++.+|+|++... ......+.+|+.+++.+ +|+||+++++++..
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~---~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI---HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc---cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 44444 458999999999999999999999999999999987642 12235677899999999 69999999998865
Q ss_pred CCcCCCccEEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEe
Q 008607 94 PSRREFKDIYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 94 ~~~~~~~~i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
........+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||+.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEc
Confidence 443445679999999984 88887753 3468999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHH
Q 008607 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTD 245 (560)
Q Consensus 169 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~ 245 (560)
|||+++....... ......|++.|+|||++... ...++.++|||||||++|+|++|+.||...+....+..+.
T Consensus 167 dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~- 242 (286)
T cd06638 167 DFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP- 242 (286)
T ss_pred cCCceeecccCCC---ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc-
Confidence 9999876532211 12345789999999998531 1357889999999999999999999997655333221110
Q ss_pred hcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 246 LLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 246 ~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...... ......++..+.+||.+||+.||++|||+.|+|+|+||
T Consensus 243 --------------------------~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 243 --------------------------RNPPPT-LHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred --------------------------ccCCCc-ccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 000000 00112356789999999999999999999999999997
No 198
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2.1e-40 Score=329.38 Aligned_cols=252 Identities=29% Similarity=0.477 Sum_probs=209.1
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|+||.||+|.+..++..+|||.+............+.+|+.+|+.++|+||+++++.+.. ...++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE-----DKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec-----CCEEE
Confidence 5999999999999999999999999999999997544444556788899999999999999999998743 24689
Q ss_pred EEEecCCc-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccccccccCC
Q 008607 104 VVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFND 179 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGla~~~~~~ 179 (560)
+||||+++ +|.+++... ..+++..++.++.|++.||+|||++||+|+||||+||+++.+ +.+||+|||++......
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 99999985 899999764 358999999999999999999999999999999999999865 46899999999865433
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
... ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.......+..
T Consensus 156 ~~~----~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-------------- 215 (256)
T cd08220 156 SKA----YTVVGTPCYISPELCEG--KPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMS-------------- 215 (256)
T ss_pred ccc----cccccCCcccCchhccC--CCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHh--------------
Confidence 221 33568899999999976 5678899999999999999999999987665433322211
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. .......+++.+.+||.+||..||.+|||+.|+|+||||
T Consensus 216 -------------~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 216 -------------GT---FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred -------------cC---CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 00 011123468889999999999999999999999999997
No 199
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-42 Score=362.56 Aligned_cols=264 Identities=28% Similarity=0.492 Sum_probs=222.2
Q ss_pred ccccCCCCce-EEEEEEeecCCeEEEEEEECCCCcEEEEEEec--CcccChhHHHHHHHHHHHHHhcCCCCccccceeec
Q 008607 16 FTEYGEGSRY-KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--DIFEHVSDATRILREIKLLRLLRHPDIVEIKHILL 92 (560)
Q Consensus 16 ~~~~~~~~~Y-~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~--~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~ 92 (560)
|-+-....|| ++.++||+|+|-+||+|.|..+|..||+-.++ +........+++..|+.+|+.|+|+||+++++.|.
T Consensus 32 ~ve~~p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~ 111 (632)
T KOG0584|consen 32 FVEKDPTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWV 111 (632)
T ss_pred ccccCCCCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeehee
Confidence 4444445666 78899999999999999999999999986554 45566677799999999999999999999999997
Q ss_pred CCCcCCCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeeeCCC-CcEEEe
Q 008607 93 PPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANAD-CKLKIC 168 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~g--IiHrDLKP~NILl~~~-~~lKL~ 168 (560)
+... ..+-+|+|+|. |+|..++++.++++...++.|++|||+||.|||++. |||||||.+||+|+.+ |.|||+
T Consensus 112 d~~n---~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIG 188 (632)
T KOG0584|consen 112 DTDN---KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIG 188 (632)
T ss_pred cCCC---ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeec
Confidence 7543 56899999998 799999999999999999999999999999999986 9999999999999986 899999
Q ss_pred cccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcC
Q 008607 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 169 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g 248 (560)
|+|||....... ....+|||.|||||+... .|+..+||||||+++.||+|+..||.......|+.+-.. .
T Consensus 189 DLGLAtl~r~s~-----aksvIGTPEFMAPEmYEE---~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~--S 258 (632)
T KOG0584|consen 189 DLGLATLLRKSH-----AKSVIGTPEFMAPEMYEE---NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT--S 258 (632)
T ss_pred chhHHHHhhccc-----cceeccCccccChHHHhh---hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH--c
Confidence 999998864332 244799999999999974 799999999999999999999999987776665543221 1
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..+|..+.. --+|++++||++||.. ..+|+|+.|+|.||||..-
T Consensus 259 -----------------------GiKP~sl~k---V~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 259 -----------------------GIKPAALSK---VKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred -----------------------CCCHHHhhc---cCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 111211211 1268899999999999 9999999999999999864
No 200
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.6e-40 Score=335.82 Aligned_cols=258 Identities=25% Similarity=0.444 Sum_probs=203.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHH-HHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKL-LRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~i-L~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++.+.||+|+||.||+|.+..+|+.||||++...... .....+..|+.+ ++.+.|+||+++++.+... ..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~-----~~ 74 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-QEQKRLLMDLDISMRSVDCPYTVTFYGALFRE-----GD 74 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecC-----Cc
Confidence 4699999999999999999999999999999998754332 233456667665 6777899999999988533 46
Q ss_pred EEEEEecCCccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 102 IYVVFELMESDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+|+||||++++|.+++.. ...+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++...
T Consensus 75 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 75 VWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred EEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 899999999998887754 23689999999999999999999997 9999999999999999999999999998764
Q ss_pred cCCCCCcccccccccCcccccccccccc--cCCCCCccchhhHHHHHHHHhhCCCCCCCCC-hhhHHHHHHHhcCCCCHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAELLTGKPLFPGKN-VVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~--~~~y~~~~DIWSlG~il~eLltG~~pF~~~~-~~~~~~~i~~~~g~p~~~ 253 (560)
..... .+...++..|+|||.+.+. ...++.++|+|||||++|+|++|+.||.... ....+..+.
T Consensus 155 ~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--------- 221 (283)
T cd06617 155 VDSVA----KTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVV--------- 221 (283)
T ss_pred ccccc----cccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHH---------
Confidence 32211 1234688899999988541 1346889999999999999999999996422 111111110
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.... ..+ ....++..+.+||.+||..||.+||+++++++||||...
T Consensus 222 --------------~~~~----~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 267 (283)
T cd06617 222 --------------EEPS----PQL--PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELH 267 (283)
T ss_pred --------------hcCC----CCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhc
Confidence 0000 000 012467889999999999999999999999999999853
No 201
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.1e-40 Score=340.05 Aligned_cols=262 Identities=25% Similarity=0.394 Sum_probs=211.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.|++++.||+|+||.||++.+..+++.|++|.+..... .......+.+|+++++.++||||+++++.+.. ...
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFET-----KRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec-----CCE
Confidence 369999999999999999999999999999999874321 22334577899999999999999999998843 346
Q ss_pred EEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+|+||||++| +|.+++...+.+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 8999999985 999999888889999999999999999999999999999999999999999999999999987421111
Q ss_pred CC------------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcC
Q 008607 181 PT------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 181 ~~------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g 248 (560)
.. ........++..|+|||.+.. ..++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~-- 231 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD-- 231 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc--
Confidence 00 001122467889999999876 57889999999999999999999999876644333222110
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccccc
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT---AEEALADPYFKGL 319 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt---a~elL~hp~f~~~ 319 (560)
...+......++..+.+||++||+.||++||+ +.++|+||||...
T Consensus 232 --------------------------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 232 --------------------------DIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred --------------------------ccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 00111112356888999999999999999998 7999999999764
No 202
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.4e-41 Score=338.76 Aligned_cols=259 Identities=26% Similarity=0.416 Sum_probs=210.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++++.||.|+||.||++.+..++..||+|.+.. ........+.+|+++++.++|+||+++++.+... ..+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQI--ESEEELEDFMVEIDILSECKHPNIVGLYEAYFYE-----NKL 77 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEee--CCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecC-----CeE
Confidence 569999999999999999999999999999999863 2344556788999999999999999999998543 468
Q ss_pred EEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|+||||+++ +|.+++... ..+++..++.++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 78 WILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred EEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 999999985 898888764 469999999999999999999999999999999999999999999999999987543222
Q ss_pred CCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
. ......++..|+|||++... ...++.++|||||||++|+|++|++||.+.+....+..+..
T Consensus 158 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------------ 222 (280)
T cd06611 158 Q---KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK------------ 222 (280)
T ss_pred c---ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc------------
Confidence 1 12345789999999997421 13467899999999999999999999987654333222211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.. .+.......++..+.+||.+||..||.+||+++++|+||||...
T Consensus 223 ---------------~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 223 ---------------SE-PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred ---------------CC-CCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 00 00111123567889999999999999999999999999999864
No 203
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8.3e-41 Score=333.64 Aligned_cols=254 Identities=27% Similarity=0.467 Sum_probs=210.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+|++.+.||.|+||.||+|.+..+++.||+|++..... .......+.+|+++++.++||||+++++.+. +...+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ-----DEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc-----CCCeE
Confidence 59999999999999999999999999999999975322 2245678889999999999999999998874 33469
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+|+||+.+ +|.+.+.....+++..++.|+.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 999999985 899999887789999999999999999999999999999999999999999999999999987654332
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+.... ..+.
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~~----------------- 211 (258)
T cd05578 155 ---LTTSTSGTPGYMAPEVLCR--QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR-DQIR----------------- 211 (258)
T ss_pred ---cccccCCChhhcCHHHHcc--cCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH-HHHH-----------------
Confidence 1234568889999999976 4688999999999999999999999987664211 0000
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH--HHHhcCccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA--EEALADPYF 316 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta--~elL~hp~f 316 (560)
..... ........++..+.+||++||..||.+||++ .|+++||||
T Consensus 212 ------~~~~~----~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 212 ------AKQET----ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred ------HHhcc----ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 00110 0111223567899999999999999999999 999999998
No 204
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.4e-40 Score=329.43 Aligned_cols=261 Identities=30% Similarity=0.467 Sum_probs=211.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
||++.+.||+|+||.||++.+..++..|++|.+............+.+|+.+++.++|+||+++++.+... ..++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHR-----EKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecC-----CEEE
Confidence 69999999999999999999999999999999875444444677899999999999999999999987433 4689
Q ss_pred EEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+|+||+. ++|.+++.....++++.++.++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++.........
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred EEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 9999998 589999988777999999999999999999999999999999999999999999999999999875443322
Q ss_pred ccc-ccccccCccccccccccccc-CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 183 AIF-WTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 183 ~~~-~~~~~gT~~Y~APEll~~~~-~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
... .....++..|+|||.+.+.. ..++.++|||||||++|+|++|+.||.+.+..........
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~--------------- 220 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVG--------------- 220 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHh---------------
Confidence 211 22456888999999987631 2378899999999999999999999976532211111000
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. ...+.......+++.+.+||++||+.||.+|||+++++.|||+
T Consensus 221 ---------~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 221 ---------A---GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred ---------c---CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0 0001111223458889999999999999999999999999996
No 205
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.7e-40 Score=333.00 Aligned_cols=261 Identities=28% Similarity=0.466 Sum_probs=209.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCc-CCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR-REF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~-~~~ 99 (560)
.++|++.+.||.|++|.||+|.+..+++.+++|++... ......+.+|+.+++.+ .|+||+++++.+..... ...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDII---EDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecC---chhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 47899999999999999999999999999999998642 22346788999999999 69999999999865442 234
Q ss_pred ccEEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 100 KDIYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
..+|+||||+++ +|.+++.. +..+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~ 161 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA 161 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence 568999999995 88888764 3579999999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
....... ......++..|+|||++... ...++.++|||||||++|+|++|+.||...+....+..+..
T Consensus 162 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------ 232 (275)
T cd06608 162 QLDSTLG---RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPR------ 232 (275)
T ss_pred ecccchh---hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhc------
Confidence 6432221 12346789999999987431 13477899999999999999999999976543332222111
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
... +.......++..+.+||++||..||++|||++++++|||+
T Consensus 233 ---------------------~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 233 ---------------------NPP-PTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ---------------------cCC-CCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 000 0011112367889999999999999999999999999996
No 206
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.1e-41 Score=336.97 Aligned_cols=256 Identities=29% Similarity=0.454 Sum_probs=211.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||.|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.++|+||+++++.+... ..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 74 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKG-----SKL 74 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEEC-----CeE
Confidence 47999999999999999999999999999999986432 233456688999999999999999999988543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+|+||+.+ +|.+++..+ .+++..++.++.||+.||.|||+.+|+||||+|+||+++.++.++|+|||+++.......
T Consensus 75 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 153 (274)
T cd06609 75 WIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS 153 (274)
T ss_pred EEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence 999999985 899998766 799999999999999999999999999999999999999999999999999987643321
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 154 ---~~~~~~~~~~y~~PE~~~~--~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~---------------- 212 (274)
T cd06609 154 ---KRNTFVGTPFWMAPEVIKQ--SGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPK---------------- 212 (274)
T ss_pred ---ccccccCCccccChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhh----------------
Confidence 1234578889999999977 4689999999999999999999999976553322221111
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..+.... ...++..+.+||.+||..||++|||++++++||||...
T Consensus 213 -----------~~~~~~~--~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~ 257 (274)
T cd06609 213 -----------NNPPSLE--GNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKA 257 (274)
T ss_pred -----------cCCCCCc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCC
Confidence 0010011 11267889999999999999999999999999999853
No 207
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.6e-40 Score=336.54 Aligned_cols=256 Identities=23% Similarity=0.364 Sum_probs=207.5
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|++.+.||.|+||.||++.+..++..+++|.+... .......+.+|+++++.++|+||+++++.+... ...|+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~~~ 79 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYYE-----NNLWI 79 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeC-----CEEEE
Confidence 78899999999999999999999999999998642 334566788999999999999999999988543 46899
Q ss_pred EEecCCc-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 105 VFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 105 V~E~~~g-dL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
|+||+++ +|..++.. ...+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 80 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~- 158 (282)
T cd06643 80 LIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ- 158 (282)
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc-
Confidence 9999985 77777654 45799999999999999999999999999999999999999999999999999875432211
Q ss_pred cccccccccCccccccccccc---ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 183 AIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~---~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
......++..|+|||++.. ....++.++|||||||++|+|++|++||...+....+..+...
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~------------- 223 (282)
T cd06643 159 --RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS------------- 223 (282)
T ss_pred --ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhc-------------
Confidence 1234578999999999742 1145778999999999999999999999876644333222110
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
... .......++..+.+||.+||+.||.+||+++++++||||..
T Consensus 224 --------------~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 267 (282)
T cd06643 224 --------------EPP-TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTV 267 (282)
T ss_pred --------------CCC-CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEec
Confidence 000 01112346788999999999999999999999999999985
No 208
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.3e-40 Score=340.76 Aligned_cols=260 Identities=29% Similarity=0.484 Sum_probs=212.4
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
+...+|++++.||.|+||.||+|.+..++..||+|.+... .......+.+|+.+++.++|+||+++++.+...
T Consensus 16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~----- 88 (297)
T cd06656 16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKNPNIVNYLDSYLVG----- 88 (297)
T ss_pred ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecC--ccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC-----
Confidence 3448899999999999999999999999999999998642 223456688999999999999999999988543
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~ 167 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP 167 (297)
T ss_pred CEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccC
Confidence 468999999985 89888865 4689999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
... ......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+.+....+..+.. .+.+
T Consensus 168 ~~~---~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~-------- 233 (297)
T cd06656 168 EQS---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTP-------- 233 (297)
T ss_pred Ccc---CcCcccCCccccCHHHHcC--CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCC--------
Confidence 221 1234578899999999876 5788999999999999999999999977654332211110 0111
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.......++..+.+||.+||..||.+||+++++|+||||....
T Consensus 234 -------------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 234 -------------------ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred -------------------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 1112235678899999999999999999999999999998644
No 209
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-42 Score=381.41 Aligned_cols=265 Identities=24% Similarity=0.391 Sum_probs=225.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
...|+|+++||+|+||.|.+++++.|++.||+|++++.. .+..+...|..|-.+|..-..+=|+.++-.|. +..
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ-----D~~ 148 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ-----DER 148 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc-----Ccc
Confidence 467999999999999999999999999999999998622 23445567888999999888899999999884 445
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++|+|||||. |||..++.+.++++++.+++|+..|+.||.-||+.|+|||||||+|||||..|+|||+|||.+-....+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d 228 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD 228 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCC
Confidence 7999999998 599999998889999999999999999999999999999999999999999999999999988765433
Q ss_pred CCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
. .......+|||.|.+||+|... .+.|++.+|.||+||++||||.|..||...+.++.+.+|+..
T Consensus 229 G--~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~h---------- 296 (1317)
T KOG0612|consen 229 G--TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNH---------- 296 (1317)
T ss_pred C--cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhch----------
Confidence 2 2344678999999999998432 256999999999999999999999999988888777776542
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCcccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT---AEEALADPYFKGLAK 321 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt---a~elL~hp~f~~~~~ 321 (560)
+....|+. -..+|..+++||+++|. +|..|.. ++++-.||||.++..
T Consensus 297 ----------------k~~l~FP~-~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 297 ----------------KESLSFPD-ETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred ----------------hhhcCCCc-ccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 22233332 23589999999999987 6889988 999999999998754
No 210
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.4e-40 Score=336.86 Aligned_cols=258 Identities=25% Similarity=0.432 Sum_probs=204.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.++||+|+||.||+|++..++..||+|.+.... .......+.+|+++|+.+.||||+++++.+... ...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~ 74 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI-TVELQKQIMSELEILYKCDSPYIIGFYGAFFVE-----NRI 74 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC-ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC-----CEE
Confidence 36899999999999999999999999999999986432 233446788999999999999999999988543 458
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
++||||+++ +|..+ ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++.......
T Consensus 75 ~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~- 149 (279)
T cd06619 75 SICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI- 149 (279)
T ss_pred EEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc-
Confidence 999999996 55433 357899999999999999999999999999999999999999999999999997643221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
....++|..|+|||.+.+ ..++.++|||||||++|+|++|+.||......... +..
T Consensus 150 ----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~---------~~~--------- 205 (279)
T cd06619 150 ----AKTYVGTNAYMAPERISG--EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGS---------LMP--------- 205 (279)
T ss_pred ----ccCCCCChhhcCceeecC--CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccc---------cch---------
Confidence 234679999999999976 57889999999999999999999999653211100 000
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
...........+.. ......++.+.+||.+||+.||.+||+++|++.||||...
T Consensus 206 --~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 206 --LQLLQCIVDEDPPV--LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY 259 (279)
T ss_pred --HHHHHHHhccCCCC--CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence 00001101111110 1123467889999999999999999999999999999865
No 211
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2.4e-40 Score=334.90 Aligned_cols=261 Identities=24% Similarity=0.427 Sum_probs=207.8
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCc-CC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR-RE 98 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~-~~ 98 (560)
..+.|++.+.||.|+||.||+|.+..+++.+|+|.+... ......+..|+.+++.+ +|+||+++++.+..... ..
T Consensus 14 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 90 (282)
T cd06636 14 PAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT---EDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH 90 (282)
T ss_pred hhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC---hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence 456899999999999999999999999999999998642 23445678899999988 69999999998864321 23
Q ss_pred CccEEEEEecCCc-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 99 FKDIYVVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 99 ~~~i~lV~E~~~g-dL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...+|+||||+++ +|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~ 170 (282)
T cd06636 91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 170 (282)
T ss_pred CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence 4578999999985 899988753 3588999999999999999999999999999999999999999999999999875
Q ss_pred ccCCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~ 252 (560)
...... .....+|+..|+|||.+... ...++.++|||||||++|+|++|..||........+..+.
T Consensus 171 ~~~~~~---~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~-------- 239 (282)
T cd06636 171 LDRTVG---RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIP-------- 239 (282)
T ss_pred hhcccc---CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHh--------
Confidence 422111 12346789999999987521 1457889999999999999999999997654322211110
Q ss_pred HHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
... ........++..+.+||++||..||.+|||+.|+|.||||
T Consensus 240 -------------------~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 240 -------------------RNP--PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred -------------------hCC--CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 000 0111123568899999999999999999999999999997
No 212
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.4e-40 Score=329.03 Aligned_cols=252 Identities=30% Similarity=0.521 Sum_probs=208.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||.|+||.||+|.+..++..|++|.+... .....+.+|+.+++.++|+||+++++.+... ..+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~ 73 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE----EDLQEIIKEISILKQCDSPYIVKYYGSYFKN-----TDL 73 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH----HHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CcE
Confidence 5799999999999999999999999999999998642 2266788999999999999999999988543 468
Q ss_pred EEEEecCCc-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|+++||+++ +|.+++.. ...+++..++.++.||+.||.|||+.+|+|+||+|+||+++.++.+||+|||++.......
T Consensus 74 ~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 74 WIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred EEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 999999995 89999875 4468999999999999999999999999999999999999999999999999987654322
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+.......+.
T Consensus 154 ~---~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~---------------- 212 (256)
T cd06612 154 A---KRNTVIGTPFWMAPEVIQE--IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIP---------------- 212 (256)
T ss_pred c---ccccccCCccccCHHHHhc--CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhc----------------
Confidence 1 1233457889999999876 578899999999999999999999997654332211110
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. ..........++..+.+||.+||+.||++|||+.|+|+||||
T Consensus 213 -----------~~-~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 213 -----------NK-PPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred -----------cC-CCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 00 001111223467889999999999999999999999999997
No 213
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-41 Score=353.29 Aligned_cols=266 Identities=31% Similarity=0.500 Sum_probs=213.1
Q ss_pred cccccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeec
Q 008607 13 VDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILL 92 (560)
Q Consensus 13 ~~~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~ 92 (560)
++|=-+|.+.++= =+||+|.||+||.|+|..|..++|||.|... .....+-+..||.+-+.|+|.|||++++.+
T Consensus 568 iefeYeyde~~er---vVLGKGTYG~VYA~RD~~tqvrIaIKEIpek--dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~- 641 (1226)
T KOG4279|consen 568 IEFEYEYDESNER---VVLGKGTYGTVYAARDMDTQVRIAIKEIPEK--DSREVQPLHEEIALHSTLRHKNIVRYLGSV- 641 (1226)
T ss_pred eEEEeeecCCCce---EEeecCceeEEEeeccccceeEEEeeecccc--cchhhccHHHHHHHHHHHhhHhHHHHhhcc-
Confidence 4453344444432 3599999999999999999999999999742 344567788999999999999999999987
Q ss_pred CCCcCCCccEEEEEecCC-ccHHHHHHh-CCCC--CHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEE
Q 008607 93 PPSRREFKDIYVVFELME-SDLHQVIKA-NDDL--TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKI 167 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~-gdL~~~i~~-~~~l--se~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL 167 (560)
.+.+.+-|.||-++ |+|..+++. .+++ +|..+-++..||++||+|||++.|+|||||.+|||||. .|.+||
T Consensus 642 ----senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKI 717 (1226)
T KOG4279|consen 642 ----SENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKI 717 (1226)
T ss_pred ----CCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEe
Confidence 33346889999998 589998875 5777 89999999999999999999999999999999999985 689999
Q ss_pred ecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhc
Q 008607 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247 (560)
Q Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~ 247 (560)
+|||-++......+-. .++.||..|||||++.....+|+.++|||||||++.||.||++||........
T Consensus 718 SDFGTsKRLAginP~T---ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA-------- 786 (1226)
T KOG4279|consen 718 SDFGTSKRLAGINPCT---ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA-------- 786 (1226)
T ss_pred cccccchhhccCCccc---cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH--------
Confidence 9999998765444332 45789999999999965457899999999999999999999999964332211
Q ss_pred CCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 248 GTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 248 g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.-|--.|-+..| .....++.+++.||.+|+.+||.+||+|.++|++||++.-
T Consensus 787 ----------------AMFkVGmyKvHP----~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 787 ----------------AMFKVGMYKVHP----PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred ----------------hhhhhcceecCC----CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 111111111111 1223567889999999999999999999999999999864
No 214
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=5.2e-40 Score=330.43 Aligned_cols=262 Identities=27% Similarity=0.480 Sum_probs=208.0
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC--------hhHHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH--------VSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~--------~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~ 95 (560)
+|.+.+.||.|+||.||+|.+..+|+.||+|.+...... ......+.+|+.+++.++|+||+++++.+...
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~- 80 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE- 80 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC-
Confidence 589999999999999999999999999999988532111 11134577899999999999999999987433
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
..+++||||+. ++|.+++...+.+++..++.++.||+.||.|||++|++||||+|+||+++.++.+||+|||+++
T Consensus 81 ----~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 81 ----EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ----CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 46899999997 5999999888889999999999999999999999999999999999999999999999999997
Q ss_pred cccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
...... .........++..|+|||.+......++.++|+|||||++|+|++|..||...+....+..+..
T Consensus 157 ~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~--------- 226 (272)
T cd06629 157 KSDDIY-DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN--------- 226 (272)
T ss_pred cccccc-cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc---------
Confidence 643221 1111234568899999999865323478899999999999999999999965443322111100
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. ...........+.++..+.+||.+||..||.+|||++++|+||||
T Consensus 227 ---------------~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 227 ---------------K-RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred ---------------c-ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 0 001111112234578899999999999999999999999999997
No 215
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.3e-40 Score=340.04 Aligned_cols=258 Identities=28% Similarity=0.526 Sum_probs=209.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.|.....||.|+||.||++.+..++..||||++... .......+.+|+.+++.++|+||+++++.+... ...
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~-----~~~ 94 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR--KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVG-----DEL 94 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc--hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecC-----CeE
Confidence 5566678899999999999999999999999998642 233456688999999999999999999987543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++ +|.+++. .+.++++.++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 95 ~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 95 WVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred EEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 999999985 7877764 45699999999999999999999999999999999999999999999999999875432221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.+....+..+...+
T Consensus 174 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~-------------- 234 (292)
T cd06658 174 ---KRKSLVGTPYWMAPEVISR--LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNL-------------- 234 (292)
T ss_pred ---cCceeecCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--------------
Confidence 1234678999999999876 578899999999999999999999998766544333221110
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
+ .........+..+.+||.+||..||.+|||++|+|+||||.....
T Consensus 235 -------------~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~ 280 (292)
T cd06658 235 -------------P-PRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP 280 (292)
T ss_pred -------------C-CccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCC
Confidence 0 001112346788999999999999999999999999999986543
No 216
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=335.04 Aligned_cols=246 Identities=19% Similarity=0.243 Sum_probs=200.6
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhH-HHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-ATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~-~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
..||+|++|.||+|.. +|+.||||++......... ...+.+|+.+|+.++||||+++++++.... .....+++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 5699999999999976 7899999999754332222 466789999999999999999999885411 22346899999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
|+. |+|.+++.....+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~----- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP----- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-----
Confidence 999 5899999988889999999999999999999998 499999999999999999999999999997653221
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
...+++..|+|||++.+....++.++|||||||++|||++|+.||.+.+..+.+..+....
T Consensus 178 -~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~------------------ 238 (283)
T PHA02988 178 -FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKN------------------ 238 (283)
T ss_pred -ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcC------------------
Confidence 2356889999999997644578999999999999999999999998876554443332110
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ....+++.+.+||.+||+.||.+|||++|+++
T Consensus 239 --------~~~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 239 --------NSLK---LPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred --------CCCC---CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 0011 11256889999999999999999999999985
No 217
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6e-40 Score=326.23 Aligned_cols=254 Identities=28% Similarity=0.489 Sum_probs=208.5
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc---ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+|++.+.||+|+||.||+|.+..+++.|++|.+..... .......+.+|+.+++.++|+||+++++.+... .
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREE-----D 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecC-----C
Confidence 58889999999999999999998999999999864221 123456788999999999999999999987433 4
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+|+|+||+++ +|.+++.....+++..++.++.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++......
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 68999999985 89999988878999999999999999999999999999999999999999999999999998765333
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
. ......++..|++||.+... ..++.++|+|||||++|+|++|+.||...........+...
T Consensus 156 ~----~~~~~~~~~~y~~pe~~~~~-~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~------------- 217 (258)
T cd06632 156 S----FAKSFKGSPYWMAPEVIAQQ-GGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS------------- 217 (258)
T ss_pred c----cccccCCCcceeCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc-------------
Confidence 2 12345788999999998652 23788999999999999999999999765532222111100
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.........+++.+.+||.+||..||.+||++.++|.|||+
T Consensus 218 ----------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 218 ----------------KELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred ----------------ccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 00112234568899999999999999999999999999996
No 218
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.4e-40 Score=332.70 Aligned_cols=257 Identities=28% Similarity=0.476 Sum_probs=209.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.|++.+.||.|+||.||+|.+..+++.||+|.+..... ......+.+|+++++.++||||+++++.+... ..+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-----~~~ 74 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYNN-----GDI 74 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeecC-----CEE
Confidence 358889999999999999999999999999999875432 24556788999999999999999999988544 468
Q ss_pred EEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|+|+||++ ++|.+++... ..+++..++.++.||+.||.|||+ .||+|+||||+||+++.++.+||+|||++......
T Consensus 75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 75 SICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred EEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999 5999999876 689999999999999999999999 99999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCCh--hhHHHHHHHhcCCCCHHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~--~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.. ....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+. ....+.+
T Consensus 155 ~~-----~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-------------- 213 (265)
T cd06605 155 LA-----KTFVGTSSYMAPERIQG--NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELL-------------- 213 (265)
T ss_pred Hh-----hcccCChhccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHH--------------
Confidence 11 12578889999999977 5788999999999999999999999975431 0011111
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCC-CCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFP-NANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~-~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..+....... ... .++..+.+||.+||..||++|||+.+++.||||+.+
T Consensus 214 ----------~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 214 ----------QYIVNEPPPR---LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred ----------HHHhcCCCCC---CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 1111111111 111 168889999999999999999999999999999865
No 219
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-42 Score=351.92 Aligned_cols=254 Identities=29% Similarity=0.570 Sum_probs=214.5
Q ss_pred eEE--EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 25 YKI--EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 25 Y~i--~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
|+| .++||+|-||+||-|.|+++|+.||||+|.+..-.......+.+|+.||+.+.||.||.+.-.|.++. .+
T Consensus 564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e-----rv 638 (888)
T KOG4236|consen 564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE-----RV 638 (888)
T ss_pred HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc-----eE
Confidence 444 38999999999999999999999999999864444445577889999999999999999998886554 59
Q ss_pred EEEEecCCccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC---cEEEeccccccccc
Q 008607 103 YVVFELMESDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFGLARVAF 177 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~---~lKL~DFGla~~~~ 177 (560)
++|||-+.||+.+.|.. .++|++..-++++.|||.||+|||-.+|+|+||||+|||+.... .+||||||+|++..
T Consensus 639 FVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg 718 (888)
T KOG4236|consen 639 FVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG 718 (888)
T ss_pred EEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecc
Confidence 99999999999998865 45799999999999999999999999999999999999998763 59999999999864
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCCh-hhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV-VHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~-~~~~~~i~~~~g~p~~~~~~ 256 (560)
.. .+..+.+||+.|.|||+|.. ..|..+-|+||+|||+|.-|.|..||....+ .+|++.-.
T Consensus 719 Ek----sFRrsVVGTPAYLaPEVLrn--kGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAa------------ 780 (888)
T KOG4236|consen 719 EK----SFRRSVVGTPAYLAPEVLRN--KGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAA------------ 780 (888)
T ss_pred hh----hhhhhhcCCccccCHHHHhh--ccccccccceeeeEEEEEEecccccCCCccchhHHhhccc------------
Confidence 43 35678899999999999987 7899999999999999999999999975432 22222110
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
| -.. ..-|.++++.++|||..+|+..-.+|-+++..|.|||+++.
T Consensus 781 ---------F-----MyP----p~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y 825 (888)
T KOG4236|consen 781 ---------F-----MYP----PNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY 825 (888)
T ss_pred ---------c-----ccC----CCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence 0 011 22356789999999999999999999999999999999864
No 220
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8.4e-40 Score=326.27 Aligned_cols=259 Identities=31% Similarity=0.474 Sum_probs=213.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.|++.+.||+|++|.||+|.+..+++.|+||++...... .....+.+|+.++..++|+||+++++.+... ..+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 74 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYKE-----GEI 74 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC-----CeE
Confidence 3689999999999999999999999999999998753322 4467788999999999999999999998544 468
Q ss_pred EEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|+||||++ ++|.+++.....+++..++.++.||+.||.|||+ .|++||||+|+||+++.++.++|+|||++.......
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 75 SIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 99999999 6999999888889999999999999999999999 999999999999999999999999999998654332
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.. .....++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...+.....+.+..
T Consensus 155 ~~---~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~--------------- 214 (264)
T cd06623 155 DQ---CNTFVGTVTYMSPERIQG--ESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA--------------- 214 (264)
T ss_pred Cc---ccceeecccccCHhhhCC--CCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH---------------
Confidence 22 134568899999999876 5788899999999999999999999977642111111111
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCC-CCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPN-ANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~-~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
+..... ...... ++..+.+||++||..+|++||++.|+|+||||+..
T Consensus 215 ---------~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 215 ---------ICDGPP---PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred ---------HhcCCC---CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 111111 111223 67889999999999999999999999999999754
No 221
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=318.26 Aligned_cols=268 Identities=25% Similarity=0.390 Sum_probs=211.1
Q ss_pred cccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 17 ~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
+.+-+++||+|.+.||+|+|+-||++.+..+++.||+|+|... ...+....++|++..++++|||++++++..+....
T Consensus 15 tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~--~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 15 TVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH--SQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred cEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeecc--chHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 3466789999999999999999999999999999999999753 34667889999999999999999999987765544
Q ss_pred CCCccEEEEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeeeCCCCcEEEec
Q 008607 97 REFKDIYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICD 169 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~g--IiHrDLKP~NILl~~~~~lKL~D 169 (560)
+.....||+++|+. |+|.+.|.. ...++|.++..|+.+|++||++||+.. .+||||||.|||+.+.+.++|.|
T Consensus 93 D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D 172 (302)
T KOG2345|consen 93 DGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMD 172 (302)
T ss_pred cCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEe
Confidence 45567999999998 789998865 236999999999999999999999999 99999999999999999999999
Q ss_pred ccccccccCCCCC------cccccccccCccccccccccc-ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHH
Q 008607 170 FGLARVAFNDTPT------AIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242 (560)
Q Consensus 170 FGla~~~~~~~~~------~~~~~~~~gT~~Y~APEll~~-~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~ 242 (560)
||.++...-.... ...|.....|..|+|||++.- .....+.++|||||||+||.|+.|..||.-
T Consensus 173 ~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~--------- 243 (302)
T KOG2345|consen 173 LGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER--------- 243 (302)
T ss_pred ccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH---------
Confidence 9999754211111 112344567889999999842 224567899999999999999999999942
Q ss_pred HHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 243 MTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 243 i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
+....|.-.. . .......+... +.++..+.+||+.||+.||.+||++.++|.+
T Consensus 244 ~~~~GgSlaL----A-------------v~n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 244 IYQQGGSLAL----A-------------VQNAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HhhcCCeEEE----e-------------eeccccccCCC-CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 1111110000 0 00011112222 2378899999999999999999999999864
No 222
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3e-40 Score=335.23 Aligned_cols=261 Identities=26% Similarity=0.443 Sum_probs=204.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.|+..+.||+|+||.||++.+..++..||||++...... .....+.+|+.++..+. |+||+++++++... ...
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~-----~~~ 78 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFRE-----GDC 78 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecC-----CcE
Confidence 567788999999999999999999999999998743222 44567889999999996 99999999987543 358
Q ss_pred EEEEecCCccHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 103 YVVFELMESDLHQVIK-----ANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 103 ~lV~E~~~gdL~~~i~-----~~~~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
++||||+..+|.++.. ....+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~ 158 (288)
T cd06616 79 WICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQL 158 (288)
T ss_pred EEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHh
Confidence 9999999876555432 235799999999999999999999975 9999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCccccccccccccc-CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~-~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ....++..|+|||++.+.. ..++.++|||||||++|+|++|+.||...+ .....+.....
T Consensus 159 ~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~------- 225 (288)
T cd06616 159 VDSIAK----TRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN--SVFDQLTQVVK------- 225 (288)
T ss_pred ccCCcc----ccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc--hHHHHHhhhcC-------
Confidence 332211 3346889999999986521 268899999999999999999999997544 11111111110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
...+.........++..+.+||.+||+.||.+|||++++++||||+..
T Consensus 226 ----------------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 226 ----------------GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred ----------------CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 011111111224578899999999999999999999999999999864
No 223
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.4e-40 Score=335.24 Aligned_cols=259 Identities=21% Similarity=0.325 Sum_probs=199.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEECC----------------CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTR----------------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~----------------tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (560)
.++|++.++||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+|+.++||||+
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHHHHHHHHhhcCCCCee
Confidence 4689999999999999999997532 34479999987432 233456788999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-ccHHHHHHhCC-------------------CCCHHHHHHHHHHHHHHHHHHHhC
Q 008607 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND-------------------DLTPEHYQFFLYQLLRGLKYIHTA 145 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~-------------------~lse~~~~~i~~Qll~aL~yLHs~ 145 (560)
++++++... ..+|+||||+. ++|.+++.... .+++..++.++.||+.||.|||+.
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~ 157 (304)
T cd05096 83 RLLGVCVDE-----DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL 157 (304)
T ss_pred EEEEEEecC-----CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 999988543 35899999998 59999886532 367788999999999999999999
Q ss_pred CeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHh
Q 008607 146 NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225 (560)
Q Consensus 146 gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLl 225 (560)
||+||||||+|||++.++.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|+|+
T Consensus 158 ~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~ 234 (304)
T cd05096 158 NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY-RIQGRAVLPIRWMAWECILM--GKFTTASDVWAFGVTLWEIL 234 (304)
T ss_pred CccccCcchhheEEcCCccEEECCCccceecccCcee-EecCcCCCCccccCHHHHhc--CCCCchhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999765332211 11123456788999999876 57899999999999999998
Q ss_pred h--CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCC
Q 008607 226 T--GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKD 303 (560)
Q Consensus 226 t--G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~ 303 (560)
+ +..||.+.+....+..+... +.... ...+....+.++..+.+||.+||+.||.+
T Consensus 235 ~~~~~~p~~~~~~~~~~~~~~~~--------------------~~~~~---~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 291 (304)
T cd05096 235 MLCKEQPYGELTDEQVIENAGEF--------------------FRDQG---RQVYLFRPPPCPQGLYELMLQCWSRDCRE 291 (304)
T ss_pred HccCCCCCCcCCHHHHHHHHHHH--------------------hhhcc---ccccccCCCCCCHHHHHHHHHHccCCchh
Confidence 7 56788766544433322211 11000 00011123456788999999999999999
Q ss_pred CCCHHHHhc
Q 008607 304 RPTAEEALA 312 (560)
Q Consensus 304 Rpta~elL~ 312 (560)
|||+++|.+
T Consensus 292 RPs~~~i~~ 300 (304)
T cd05096 292 RPSFSDIHA 300 (304)
T ss_pred CcCHHHHHH
Confidence 999999953
No 224
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.5e-40 Score=329.19 Aligned_cols=251 Identities=20% Similarity=0.308 Sum_probs=201.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC---CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~---~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.++|++.+.||+|+||.||+|.+. ..+..||+|.++... .......+.+|+.+|+.++||||+++++++...
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC-SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRG---- 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecC----
Confidence 467999999999999999999765 456789999987532 223445788999999999999999999988543
Q ss_pred CccEEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+||||+++ +|.+++... ..+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||.+...
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 79 -NTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred -CCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 468999999985 888888764 47999999999999999999999999999999999999999999999999987653
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+..+.+..+.+..
T Consensus 158 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-------- 225 (266)
T cd05064 158 KSEAIY--TTMSGKSPVLWAAPEAIQY--HHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF-------- 225 (266)
T ss_pred cccchh--cccCCCCceeecCHHHHhh--CCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--------
Confidence 211110 0112335678999999876 578999999999999999775 999998776554443332211
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.. .....++..+.+|+.+||+.||.+||++++|++
T Consensus 226 -------------------~~---~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 226 -------------------RL---PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -------------------CC---CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 11 112456788999999999999999999999975
No 225
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=9.3e-40 Score=324.97 Aligned_cols=253 Identities=29% Similarity=0.503 Sum_probs=207.7
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|+||.||++.+..+|..||+|.+............+.+|+.+++.++|+||+++++.+... ..+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~-----~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQEN-----GRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccC-----CeEE
Confidence 58999999999999999999999999999999865322334456778999999999999999999988443 4689
Q ss_pred EEEecCCc-cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCc-EEEecccccccccCC
Q 008607 104 VVFELMES-DLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK-LKICDFGLARVAFND 179 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~-lKL~DFGla~~~~~~ 179 (560)
+|+||+.+ +|.+++.... .+++..+..++.||+.||.|||+.+|+|+||||+||+++.++. +||+|||.+......
T Consensus 76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 99999974 9999887643 4799999999999999999999999999999999999998864 699999999765432
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. ......|++.|+|||.+.+ ..++.++|+|||||++++|++|..||.+.+....+..+..
T Consensus 156 ~~---~~~~~~~~~~~~ape~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------- 216 (257)
T cd08225 156 ME---LAYTCVGTPYYLSPEICQN--RPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ-------------- 216 (257)
T ss_pred cc---cccccCCCccccCHHHHcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--------------
Confidence 21 1133568899999999876 4688999999999999999999999977654333221110
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
. .+....+.++..+.++|.+||..+|++|||+.|+++||||
T Consensus 217 -------------~---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 217 -------------G---YFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred -------------c---cCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 0 0112234567889999999999999999999999999997
No 226
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2e-39 Score=325.29 Aligned_cols=259 Identities=27% Similarity=0.459 Sum_probs=209.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc---cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF---EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~---~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
..|++.+.||+|+||.||+|.+..+++.||+|.+.... ........+.+|+.+++.++|+||+++++.+.... .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~---~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPE---E 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCC---C
Confidence 57999999999999999999999999999999875321 12234567889999999999999999999875432 2
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
..+++|+||+.+ +|.+++...+.+++..++.++.||+.||.|||+.||+|+||||+||+++.++.++|+|||+++....
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 158 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQT 158 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence 458899999984 8999998877899999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
............++..|+|||++.+ ..++.++|+|||||++|+|++|+.||........+ .+....+.
T Consensus 159 ~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~---~~~~~~~~------- 226 (264)
T cd06653 159 ICMSGTGIKSVTGTPYWMSPEVISG--EGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAI---FKIATQPT------- 226 (264)
T ss_pred ccccCccccccCCcccccCHhhhcC--CCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHH---HHHHcCCC-------
Confidence 2111111234578999999999876 56788999999999999999999999765433322 22111110
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.......+++.+.++|++||. +|..||++.++|.|||.
T Consensus 227 -------------------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 227 -------------------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred -------------------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 011224578899999999999 57999999999999983
No 227
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.6e-39 Score=330.38 Aligned_cols=258 Identities=29% Similarity=0.528 Sum_probs=211.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|...+.||+|++|.||++.+..++..+++|++... .......+.+|+.+++.+.|+||+++++.+... ...
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~-----~~~ 91 (285)
T cd06648 19 SYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR--KQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVG-----DEL 91 (285)
T ss_pred HhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc--chhHHHHHHHHHHHHHHcCCCChheEEEEEEcC-----CeE
Confidence 3566678999999999999999999999999998632 233455688999999999999999999987543 458
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+|+||+.+ +|.+++.. ..++++.++.++.||+.||+|||++||+||||+|+||+++.++.++|+|||++........
T Consensus 92 ~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred EEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 999999975 89998877 5799999999999999999999999999999999999999999999999998875433222
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
. .....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 171 ~---~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--------------- 230 (285)
T cd06648 171 R---RKSLVGTPYWMAPEVISR--LPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--------------- 230 (285)
T ss_pred c---cccccCCccccCHHHhcC--CCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc---------------
Confidence 1 133568999999999876 56889999999999999999999999876654433322211
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
..+.......++..+.+||++||..||++|||+.++|+||||+....
T Consensus 231 -------------~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 231 -------------LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred -------------CCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 00111112346788999999999999999999999999999987553
No 228
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-40 Score=365.23 Aligned_cols=257 Identities=25% Similarity=0.421 Sum_probs=205.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCcccccee-ecCCCcCC-
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHI-LLPPSRRE- 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i-~~~~~~~~- 98 (560)
..+++|.+.|.+|+|+.||+|.+...|..||+|++... +......+.+||.+|++|+ |+|||.+++. ........
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~ 113 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNG 113 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCc
Confidence 36789999999999999999999998899999998643 6667788999999999998 9999999994 33222222
Q ss_pred CccEEEEEecCC-ccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~g--IiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
.-.++|+||||. |.|.+++.. ...|+|.++.+||+|+++||++||... |||||||-+||||+.+|.+||||||.|
T Consensus 114 ~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 114 VWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred eeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 246889999999 699999975 346999999999999999999999998 999999999999999999999999999
Q ss_pred ccccCCCCCccc------ccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHh
Q 008607 174 RVAFNDTPTAIF------WTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL 246 (560)
Q Consensus 174 ~~~~~~~~~~~~------~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~ 246 (560)
+-.......... --....|+.|||||.|.-. ....+.|+|||+|||+||.||....||.+.....+++
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIln----- 268 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILN----- 268 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEe-----
Confidence 754332211100 0123579999999987321 1467899999999999999999999998653221110
Q ss_pred cCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 247 ~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+..+ ..++.++..+.+||+.||+.||.+||++-|++.+
T Consensus 269 -------------------------g~Y~~---P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 269 -------------------------GNYSF---PPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred -------------------------ccccC---CCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 01111 2246788999999999999999999999999864
No 229
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.1e-40 Score=336.44 Aligned_cols=257 Identities=29% Similarity=0.533 Sum_probs=209.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.-|+....||+|+||.||+|.+..++..||||++... .......+.+|+.+++.+.||||+++++.+... ..+
T Consensus 21 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~~ 93 (297)
T cd06659 21 SLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLR--KQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVG-----EEL 93 (297)
T ss_pred hhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEec--ccchHHHHHHHHHHHHhCCCCchhhhhhheeeC-----CeE
Confidence 4455666899999999999999999999999998642 223456688999999999999999999988543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+|+||+++ +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 94 ~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~ 172 (297)
T cd06659 94 WVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP 172 (297)
T ss_pred EEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence 999999985 78877654 5699999999999999999999999999999999999999999999999999875432221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.....+++..|+|||++.+ ..++.++|||||||++|+|++|+.||...+....+..+..
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---------------- 231 (297)
T cd06659 173 ---KRKSLVGTPYWMAPEVISR--TPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---------------- 231 (297)
T ss_pred ---cccceecCccccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc----------------
Confidence 1234678999999999976 5788999999999999999999999987665444332211
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
. ..........++..+.+||++||+.||.+||+++++++||||.+..
T Consensus 232 -----------~-~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~ 278 (297)
T cd06659 232 -----------S-PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTG 278 (297)
T ss_pred -----------c-CCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCC
Confidence 0 1111222345678899999999999999999999999999998654
No 230
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=7.3e-40 Score=331.03 Aligned_cols=252 Identities=26% Similarity=0.392 Sum_probs=203.0
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||+|+||+||+|.+..+|+.||+|.+..... .......+.+|+++|+.++||||+.+++++.. ...+|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET-----KDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec-----CCeEEEEEecC
Confidence 6899999999999999999999999864322 22234456789999999999999999998843 24689999999
Q ss_pred C-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 110 E-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 110 ~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
+ ++|.+++.... .+++..++.++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++....... ..
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~----~~ 151 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK----KI 151 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC----cc
Confidence 8 59999987765 69999999999999999999999999999999999999999999999999987643321 12
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus 152 ~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-------------------- 209 (277)
T cd05577 152 KGRAGTPGYMAPEVLQG--EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRR-------------------- 209 (277)
T ss_pred ccccCCCCcCCHHHhcC--CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhc--------------------
Confidence 34567889999999876 45889999999999999999999999776532211111110
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
....+ ....+..++.+.+||++||+.||.+|| ++.++++||||..+.
T Consensus 210 ----~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 210 ----TLEMA---VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred ----ccccc---ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 00011 112245688999999999999999999 999999999998654
No 231
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-39 Score=324.35 Aligned_cols=248 Identities=29% Similarity=0.450 Sum_probs=204.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||.|+||.||++.+..++..||+|.++... .......+.+|+.+++.++|+||+++++.+... ..+|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~ 74 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK-SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEAD-----GHLY 74 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc-chHHHHHHHHHHHHHHhCCCCCcceEEEEEEEC-----CEEE
Confidence 5899999999999999999999999999999986432 234556788999999999999999999988433 4689
Q ss_pred EEEecCC-ccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
+||||++ ++|.+++.. ...++++.++.|+.||+.||.|||++||+|+||||+|||++.++.++|+|||+++......
T Consensus 75 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 75 IVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred EEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999998 589988865 3358999999999999999999999999999999999999999999999999987653221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ......++..|+|||++.+ ..++.++|+|||||++|+|++|..||...+....+..+..
T Consensus 155 ~---~~~~~~~~~~~~aPE~~~~--~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~--------------- 214 (255)
T cd08219 155 A---YACTYVGTPYYVPPEIWEN--MPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ--------------- 214 (255)
T ss_pred c---ccccccCCccccCHHHHcc--CCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc---------------
Confidence 1 1234678999999999876 5688999999999999999999999987664433322211
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......++..+.+||.+||+.||.+|||+.++|+
T Consensus 215 ------------~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 215 ------------GSY---KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred ------------CCC---CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 000 1112346788999999999999999999999986
No 232
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=9.4e-40 Score=326.76 Aligned_cols=249 Identities=23% Similarity=0.404 Sum_probs=204.9
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||.|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++|+||+++++.+... ..+|+|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDK-----KYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcC-----CccEEEEecC
Confidence 6999999999999999999999999874322 223456788999999999999999999987433 4689999999
Q ss_pred C-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccc
Q 008607 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD 188 (560)
Q Consensus 110 ~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~ 188 (560)
+ ++|.+++.....+++..+..++.||+.||+|||++|++|+||+|+||+++.++.+||+|||++....... ....
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----~~~~ 151 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----KTWT 151 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc----cccc
Confidence 8 5999999888789999999999999999999999999999999999999999999999999998764432 1134
Q ss_pred cccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCC--hhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN--VVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 189 ~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~--~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
..++..|++||.+.+ ..++.++|+|||||++|+|++|..||.... ....+..+..
T Consensus 152 ~~~~~~~~~PE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--------------------- 208 (262)
T cd05572 152 FCGTPEYVAPEIILN--KGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK--------------------- 208 (262)
T ss_pred ccCCcCccChhHhcC--CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc---------------------
Confidence 578899999999876 568899999999999999999999997765 2222111110
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCcccccc
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGL 319 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~ 319 (560)
..... ......++.+.+||.+||..||.+||+ ++|+++||||+++
T Consensus 209 -----~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 209 -----GNGKL---EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred -----cCCCC---CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 00011 111234788999999999999999999 9999999999865
No 233
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=354.72 Aligned_cols=262 Identities=25% Similarity=0.408 Sum_probs=214.0
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
+-...|+|+..||.|+||.||+|.++.++-..|.|+|.. ........++-||.||..+.||+||+|++.|+...
T Consensus 29 nP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~en---- 102 (1187)
T KOG0579|consen 29 NPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN---- 102 (1187)
T ss_pred CHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC----
Confidence 334568889999999999999999999999999998853 34456778889999999999999999999986653
Q ss_pred ccEEEEEecCCcc-HHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 100 KDIYVVFELMESD-LHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 100 ~~i~lV~E~~~gd-L~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
.+||+.|||+|. +..++.. ...|++++++.+++|+|.||.|||+++|||||||..|||++-+|.++|+|||.+....
T Consensus 103 -kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~ 181 (1187)
T KOG0579|consen 103 -KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK 181 (1187)
T ss_pred -ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccch
Confidence 599999999975 4444444 4469999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCCcccccccccCccccccccccc---ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGS---FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~---~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
. +.....+++|||+|||||+... ...+|++++||||||++|.||..+.+|-..-+....+-+|.+
T Consensus 182 ~---t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaK--------- 249 (1187)
T KOG0579|consen 182 S---TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK--------- 249 (1187)
T ss_pred h---HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhh---------
Confidence 2 2223467899999999998521 125799999999999999999999999876665544433332
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
..|..+ -....++..+.|||++||.+||..||++.++|+||||.+.
T Consensus 250 ------------------SePPTL-lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~ 295 (1187)
T KOG0579|consen 250 ------------------SEPPTL-LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNA 295 (1187)
T ss_pred ------------------cCCCcc-cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccC
Confidence 111111 1234678889999999999999999999999999999864
No 234
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-41 Score=342.87 Aligned_cols=261 Identities=28% Similarity=0.448 Sum_probs=216.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChh-HHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-DATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~-~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
-+.|+.-++||+|+||.||-++-+.||+.||+|++.+...+.. ...-.++|-.||.+++.+.||.+-..|.+. .
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTk-----d 258 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETK-----D 258 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCC-----C
Confidence 4678889999999999999999999999999999875333222 234467999999999999999998888554 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
.+++|+.+|. |||.-.|.+.+ .|+++.+.+++.+|+.||.+||..+|+.|||||+|||+|++|+++|+|.|||....
T Consensus 259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 6999999998 59999888766 79999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.+.+. ...+||..|||||++.+ ..|+.+.|.|||||+||||+.|+.||.....-..-
T Consensus 339 ~g~~~----~~rvGT~GYMAPEvl~n--e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~----------------- 395 (591)
T KOG0986|consen 339 EGKPI----RGRVGTVGYMAPEVLQN--EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKR----------------- 395 (591)
T ss_pred CCCcc----ccccCcccccCHHHHcC--CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhH-----------------
Confidence 55443 55699999999999987 57999999999999999999999999654321111
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
++ ++.+....+..++ ...|+++++|.+.+|++||.+|. +++++-+||||+.+.
T Consensus 396 ---eE----vdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln 453 (591)
T KOG0986|consen 396 ---EE----VDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN 453 (591)
T ss_pred ---HH----HHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence 11 1111112222222 46789999999999999999996 588999999999864
No 235
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.2e-39 Score=328.06 Aligned_cols=256 Identities=31% Similarity=0.542 Sum_probs=211.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~ 100 (560)
++|++.+.||+|+||.||+|.+..+|..||+|++.... ........+.+|+.+++.++ |+||+++++++... .
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~-----~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDE-----E 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCC-----c
Confidence 47999999999999999999999999999999987522 23344567889999999999 99999999987433 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.+++|||++. ++|.+++.+.+.+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 6899999995 699999998888999999999999999999999999999999999999999999999999999865432
Q ss_pred CCC-----------------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHH
Q 008607 180 TPT-----------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242 (560)
Q Consensus 180 ~~~-----------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~ 242 (560)
... ........++..|+|||.+.+ ..++.++|||||||++++|++|+.||...+....+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 233 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE--KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQK 233 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCC--CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHH
Confidence 211 011234567899999999876 4678899999999999999999999987664332222
Q ss_pred HHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH----HHHhcCccc
Q 008607 243 MTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA----EEALADPYF 316 (560)
Q Consensus 243 i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta----~elL~hp~f 316 (560)
+.. .. ......+++.+.+||++||+.||.+||++ +++|+||||
T Consensus 234 ~~~--------------------------~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 234 ILK--------------------------LE-----YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHh--------------------------cC-----CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 211 00 11123557889999999999999999999 999999998
No 236
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=8.8e-40 Score=330.68 Aligned_cols=252 Identities=23% Similarity=0.364 Sum_probs=203.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCC-----cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg-----~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
++|++++.||+|+||.||+|.+...+ ..||+|.+.... .......+.+|+.+|+.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~--- 80 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKE--- 80 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-CHHHHHHHHHHHHHHHhcCCcccceEEEEEcCC---
Confidence 46999999999999999999876655 689999986432 233456788999999999999999999988433
Q ss_pred CCccEEEEEecCC-ccHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~----------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
...|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 81 --~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~ 158 (283)
T cd05048 81 --QPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG 158 (283)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence 35899999998 5999999764 4578899999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhH
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~ 239 (560)
.++.+||+|||+++........ .......+++.|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+.
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADYY-RVQSKSLLPVRWMPPEAILY--GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEV 235 (283)
T ss_pred CCCcEEECCCcceeeccccccc-cccCCCcccccccCHHHhcc--CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9999999999999754322211 11234567889999999876 578999999999999999998 9999987765443
Q ss_pred HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 240 LDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 240 ~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
...+.. ... ......+++.+.+|+.+||+.||.+||++.|++++
T Consensus 236 ~~~i~~---------------------------~~~---~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 236 IEMIRS---------------------------RQL---LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHc---------------------------CCc---CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 332221 111 11124678999999999999999999999999874
No 237
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=3.1e-39 Score=320.01 Aligned_cols=253 Identities=29% Similarity=0.520 Sum_probs=212.1
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|+||.||++.+..++..|++|++............+.+|+++++.++|+|++++.+.+... ..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~-----~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEK-----GKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecC-----CEEE
Confidence 58999999999999999999999999999999976544445667788999999999999999999988544 4689
Q ss_pred EEEecCCc-cHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 104 VVFELMES-DLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~----~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+|+|++++ +|.+.+... ..+++..++.++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.....
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 155 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS 155 (258)
T ss_pred EEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence 99999985 899988763 6799999999999999999999999999999999999999999999999999976544
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
... ......+++.|+|||.+.+ ..++.++|+||+|+++++|++|+.||...+.......+..
T Consensus 156 ~~~---~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------------- 217 (258)
T cd08215 156 TVD---LAKTVVGTPYYLSPELCQN--KPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILK------------- 217 (258)
T ss_pred Ccc---eecceeeeecccChhHhcc--CCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc-------------
Confidence 321 1234578899999999876 5688899999999999999999999977653322221111
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. .......++..+.++|++||..||.+|||+.++|+||||
T Consensus 218 --------------~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 218 --------------GQ---YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred --------------CC---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 11 111122567889999999999999999999999999997
No 238
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-39 Score=328.22 Aligned_cols=266 Identities=24% Similarity=0.404 Sum_probs=207.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++.+.||.|++|.||+|.+..+++.+|+|.+... .......++.+|+++++.++|+||+++++++.... ...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~---~~~~ 76 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTD-PNPDLQKQILRELEINKSCKSPYIVKYYGAFLDES---SSSI 76 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecC-CchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC---CCeE
Confidence 4699999999999999999999999999999998743 22245567899999999999999999999885432 2468
Q ss_pred EEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 103 YVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....
T Consensus 77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 999999985 88877643 3468999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCCh--hhHHHHHHHhcCCCCHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV--VHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~--~~~~~~i~~~~g~p~~~~~ 255 (560)
.... ....++..|+|||.+.+ ..++.++|||||||++|+|++|..||..... ....+...
T Consensus 157 ~~~~-----~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----------- 218 (287)
T cd06621 157 NSLA-----GTFTGTSFYMAPERIQG--KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS----------- 218 (287)
T ss_pred cccc-----ccccCCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH-----------
Confidence 2221 23467889999999876 5788999999999999999999999976532 11111111
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
++..............-..+++.+.+||.+||..||.+|||+.|++.||||+...
T Consensus 219 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 219 ----------YIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM 273 (287)
T ss_pred ----------HHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence 1111000000000000113467899999999999999999999999999997543
No 239
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=100.00 E-value=6.2e-41 Score=345.11 Aligned_cols=280 Identities=32% Similarity=0.540 Sum_probs=227.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCC------CCccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH------PDIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~H------pnIv~l~~i~~~~~ 95 (560)
.++|.+....|+|-||+|..|.|...|..||||+|.+ +..-...=++|++||++|.. -+++.++..|...
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRn---NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk- 506 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRN---NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK- 506 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeec---chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc-
Confidence 5899999999999999999999999999999999974 33334455689999999963 3678888877443
Q ss_pred cCCCccEEEEEecCCccHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEeccc
Q 008607 96 RREFKDIYVVFELMESDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFG 171 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~gdL~~~i~~~~---~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFG 171 (560)
+++|||||-+.-+|.+++++-+ .|....++.|++||+.||+.|-..||+|.||||+|||||+. ..+||||||
T Consensus 507 ----nHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 507 ----NHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred ----ceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCc
Confidence 5799999999999999998754 58999999999999999999999999999999999999986 568999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
.|....... .+.|..++.|+|||++.| ..|+..+|+||+||+||||.||+.+|+|.+..+.+..++++-|..+
T Consensus 583 SA~~~~ene-----itPYLVSRFYRaPEIiLG--~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p 655 (752)
T KOG0670|consen 583 SASFASENE-----ITPYLVSRFYRAPEIILG--LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFP 655 (752)
T ss_pred ccccccccc-----ccHHHHHHhccCcceeec--CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCc
Confidence 997654332 377899999999999998 6899999999999999999999999999999999999999999887
Q ss_pred HHHHHHhhhHHHHHHHHh--------------------hccCCC-CCCC------CCCC----CCCHHHHHHHHHhcccC
Q 008607 252 PEAIARVRNEKARRYLSS--------------------MRKKKP-IPFS------QKFP----NANPLALRLLERMLAFE 300 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~--------------------~~~~~~-~~~~------~~~~----~~s~~~~dLI~~mL~~D 300 (560)
...+.+..-. ...|+. |...+| ..+. +.++ ..-..+.+||.+||..|
T Consensus 656 ~KmlRKgqF~--dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~Ld 733 (752)
T KOG0670|consen 656 NKMLRKGQFK--DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILD 733 (752)
T ss_pred HHHhhhcchh--hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccC
Confidence 7766543210 000110 000011 0000 0111 12245899999999999
Q ss_pred CCCCCCHHHHhcCccccc
Q 008607 301 PKDRPTAEEALADPYFKG 318 (560)
Q Consensus 301 P~~Rpta~elL~hp~f~~ 318 (560)
|.+|.|..++|.||||.+
T Consensus 734 P~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 734 PEKRITVNQALKHPFITE 751 (752)
T ss_pred hhhcCCHHHHhcCCcccC
Confidence 999999999999999974
No 240
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-39 Score=330.28 Aligned_cols=252 Identities=27% Similarity=0.412 Sum_probs=197.1
Q ss_pred EEeecCCeEEEEEEECCCCcEEEEEEecCcccChh-HHHHHHHHHHHHHh---cCCCCccccceeecCCCcCCCccEEEE
Q 008607 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-DATRILREIKLLRL---LRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~-~~~~i~rEi~iL~~---l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
+||+|+||.||++.+..+++.+|+|.+........ ......+|..+++. ..|+||+.+++.+... +.+|+|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTP-----DKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecC-----CeEEEE
Confidence 48999999999999999999999999865332212 22334455554444 4699999998888543 358999
Q ss_pred EecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcc
Q 008607 106 FELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~ 184 (560)
|||+. ++|.+++...+.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 76 LDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 99998 5899999888889999999999999999999999999999999999999999999999999986543221
Q ss_pred cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHH
Q 008607 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKAR 264 (560)
Q Consensus 185 ~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 264 (560)
.....||..|+|||.+... ..++.++||||+||++|+|++|..||.+........ +..
T Consensus 152 -~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~-~~~------------------- 209 (279)
T cd05633 152 -PHASVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDR------------------- 209 (279)
T ss_pred -ccCcCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH-HHH-------------------
Confidence 1235789999999998531 457889999999999999999999997643221110 000
Q ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 265 RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
...... ....+.+++.+.+||++||..||.+|+ |++|+++||||+++.
T Consensus 210 -----~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 210 -----MTLTVN---VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred -----HhhcCC---cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 000000 112345788999999999999999999 699999999999754
No 241
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-40 Score=320.40 Aligned_cols=259 Identities=24% Similarity=0.431 Sum_probs=211.0
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.+++..||.|+.|+||+++.+.+|...|||.+.+. .+.....+|++.+.++..-. +|+||+.+++|.... +++
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt-~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-----dV~ 167 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRT-GNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-----DVF 167 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeeccc-CCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-----hHH
Confidence 35678899999999999999999999999999864 45567789999999987665 899999999997654 589
Q ss_pred EEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 104 VVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 104 lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|.||.|..-+..+++. .+.++|..+-++...++.||.||.. +||+|||+||+|||+|+.|.+||||||.+-.......
T Consensus 168 IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkA 247 (391)
T KOG0983|consen 168 ICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKA 247 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccc
Confidence 9999999766666654 3469999999999999999999975 5899999999999999999999999999976544332
Q ss_pred CcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 182 TAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
.+...|-+.|||||.+.-. ...|+..+||||||+.++||.||+.||.+.+.. ++.+++++.
T Consensus 248 ----htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td--Fe~ltkvln------------ 309 (391)
T KOG0983|consen 248 ----HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD--FEVLTKVLN------------ 309 (391)
T ss_pred ----cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc--HHHHHHHHh------------
Confidence 2456788999999998532 467999999999999999999999999986642 222222211
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
..| +.-..-.++|+.+.+|+..||++|+.+||...++|+|||+....
T Consensus 310 ------------~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye 356 (391)
T KOG0983|consen 310 ------------EEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE 356 (391)
T ss_pred ------------cCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence 111 11111234799999999999999999999999999999998654
No 242
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.5e-39 Score=332.08 Aligned_cols=258 Identities=29% Similarity=0.497 Sum_probs=210.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
..+|++.+.||+|+||.||++.+..++..||+|.+... .......+.+|+.+++.++||||+++++.+... ..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~-----~~ 90 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQ--QQPKKELIINEILVMRENKHPNIVNYLDSYLVG-----DE 90 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccc--cchHHHHHHHHHHHHhhcCCCCeeehhheeeeC-----Cc
Confidence 47899999999999999999999999999999998632 233456788999999999999999999988543 46
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
.|+|+||++ ++|.+++.+. .+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 91 ~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 91 LWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred EEEEEecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 899999998 4899988654 58999999999999999999999999999999999999999999999999887543222
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ......+++.|+|||.+.. ..++.++|+|||||++|+|++|+.||...+...++..+.. .+
T Consensus 170 ~---~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~------------ 231 (293)
T cd06647 170 S---KRSTMVGTPYWMAPEVVTR--KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NG------------ 231 (293)
T ss_pred c---ccccccCChhhcCchhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhc-CC------------
Confidence 1 2234578899999999866 5688999999999999999999999987664433221110 00
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.+.......++..+.+||++||..||.+||++.+++.|+||+...
T Consensus 232 ---------------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 232 ---------------TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred ---------------CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 001112234577899999999999999999999999999998543
No 243
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3.7e-39 Score=323.16 Aligned_cols=248 Identities=22% Similarity=0.449 Sum_probs=202.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|++.+.||+|+||.||+|.+..+++.||+|++.. .......+.+|+++|+.++|+||+++++++... ..+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE-----PPF 77 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecC---CchHHHHHHHHHHHHHhCCCCChhheEEEEcCC-----CCc
Confidence 469999999999999999999999999999999864 223456788999999999999999999988443 458
Q ss_pred EEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++||||++ ++|.+++.... .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 78 YIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999997 58999987643 5899999999999999999999999999999999999999999999999999865433
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+..+....+...
T Consensus 158 ~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~------------ 221 (263)
T cd05052 158 TYTA--HAGAKFPIKWTAPESLAY--NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG------------ 221 (263)
T ss_pred eeec--cCCCCCccccCCHHHhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC------------
Confidence 2211 112234567999999876 578899999999999999998 99999887654433322110
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... .....++..+.+||.+||+.||++|||+.++++
T Consensus 222 ---------------~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 222 ---------------YRM---ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred ---------------CCC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 000 112456789999999999999999999999975
No 244
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2.9e-39 Score=331.90 Aligned_cols=258 Identities=27% Similarity=0.419 Sum_probs=210.1
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
....+|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~---- 87 (307)
T cd06607 12 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLRE---- 87 (307)
T ss_pred CcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeC----
Confidence 344679999999999999999999999999999999864322 233446788999999999999999999998543
Q ss_pred CccEEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
...|+||||+.|+|.+++.. ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.+||+|||++....
T Consensus 88 -~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~ 166 (307)
T cd06607 88 -HTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVS 166 (307)
T ss_pred -CeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence 35899999999998888764 4469999999999999999999999999999999999999999999999999986542
Q ss_pred CCCCCcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.. ....++..|+|||++.+. ...++.++|||||||++|+|++|+.||.+.+....+..+..
T Consensus 167 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~----------- 228 (307)
T cd06607 167 PA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ----------- 228 (307)
T ss_pred CC-------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-----------
Confidence 21 235688899999987421 14578899999999999999999999987664433222111
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
..+. ......++..+.+||.+||..||++||++.+++.||||..
T Consensus 229 ----------------~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 229 ----------------NDSP--TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred ----------------CCCC--CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 0000 0011235778999999999999999999999999999974
No 245
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=333.99 Aligned_cols=288 Identities=30% Similarity=0.500 Sum_probs=224.2
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-----C---CCccccceeec
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-----H---PDIVEIKHILL 92 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-----H---pnIv~l~~i~~ 92 (560)
.+.||.+.++||.|-|++||+|.|..+.+.||+|+++.. ....+..+.||++|++++ | ..||+|++.|.
T Consensus 76 ~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk 152 (590)
T KOG1290|consen 76 NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK 152 (590)
T ss_pred cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence 358999999999999999999999999999999998732 223455779999999995 2 35999999886
Q ss_pred CCCcCCCccEEEEEecCCccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCC-------
Q 008607 93 PPSRREFKDIYVVFELMESDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANAD------- 162 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~------- 162 (560)
... .+..+++||||+++.+|..+|+... .++...++.|++|||.||.|||.. ||||.||||+|||+..+
T Consensus 153 hsG-pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~ 231 (590)
T KOG1290|consen 153 HSG-PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKD 231 (590)
T ss_pred ecC-CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhh
Confidence 543 5667999999999999999998754 699999999999999999999965 99999999999995110
Q ss_pred --------------------------------------------------------------------------------
Q 008607 163 -------------------------------------------------------------------------------- 162 (560)
Q Consensus 163 -------------------------------------------------------------------------------- 162 (560)
T Consensus 232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~ 311 (590)
T KOG1290|consen 232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING 311 (590)
T ss_pred hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence
Q ss_pred -------------------------------------------------------------------------------C
Q 008607 163 -------------------------------------------------------------------------------C 163 (560)
Q Consensus 163 -------------------------------------------------------------------------------~ 163 (560)
.
T Consensus 312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di 391 (590)
T KOG1290|consen 312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI 391 (590)
T ss_pred cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence 0
Q ss_pred cEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCC------CChh
Q 008607 164 KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG------KNVV 237 (560)
Q Consensus 164 ~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~------~~~~ 237 (560)
++||+|||.|+-.. ..++..+.|+.|+|||++.+ ..|++.+||||++|++|||+||..+|.- ....
T Consensus 392 ~vKIaDlGNACW~~------khFT~DIQTRQYRapEVllG--sgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDE 463 (590)
T KOG1290|consen 392 RVKIADLGNACWVH------KHFTEDIQTRQYRAPEVLLG--SGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDE 463 (590)
T ss_pred eEEEeeccchhhhh------hhhchhhhhhhccCcceeec--CCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccH
Confidence 13444444443211 12355678999999999988 7999999999999999999999999963 2356
Q ss_pred hHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhc------cCCCCCCCCC------CC-CCCHHHHHHHHHhcccCCCCC
Q 008607 238 HQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMR------KKKPIPFSQK------FP-NANPLALRLLERMLAFEPKDR 304 (560)
Q Consensus 238 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~------~~-~~s~~~~dLI~~mL~~DP~~R 304 (560)
+.+..|.+++|..+...+..-.. -++|++.-. +-++.++... |+ .....+.|||.-||+++|++|
T Consensus 464 DHiA~i~ELLG~iPr~ia~~Gk~--SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR 541 (590)
T KOG1290|consen 464 DHIALIMELLGKIPRKIALGGKY--SRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKR 541 (590)
T ss_pred HHHHHHHHHHhhccHHHHhcCcc--hHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCcccc
Confidence 78899999999888877654433 245555322 2222222211 11 123458899999999999999
Q ss_pred CCHHHHhcCccccccccc
Q 008607 305 PTAEEALADPYFKGLAKV 322 (560)
Q Consensus 305 pta~elL~hp~f~~~~~~ 322 (560)
|||.++|+|||++.....
T Consensus 542 ~tA~~cl~hPwLn~~~~~ 559 (590)
T KOG1290|consen 542 PTAAQCLKHPWLNPVAGP 559 (590)
T ss_pred ccHHHHhcCccccCCCCC
Confidence 999999999999977654
No 246
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=6.3e-39 Score=317.78 Aligned_cols=253 Identities=32% Similarity=0.542 Sum_probs=212.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|++|.||++.+..+++.|++|.+............+.+|+++++.++|+|++++++++... ..+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETS-----DSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeC-----CEEE
Confidence 58999999999999999999999999999999976544445667889999999999999999999987443 4689
Q ss_pred EEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+||||+++ +|.+++...+.++++.++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.........
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 76 IILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred EEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 99999985 89999988888999999999999999999999999999999999999999999999999999876443321
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
.....++..|+|||.+.+ ..++.++||||||+++|+|++|+.||...+....+..+.
T Consensus 156 ---~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~------------------ 212 (254)
T cd06627 156 ---DASVVGTPYWMAPEVIEM--SGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV------------------ 212 (254)
T ss_pred ---ccccccchhhcCHhhhcC--CCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHh------------------
Confidence 234568889999999876 457889999999999999999999997655322221110
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. ........++..+.+||.+||..||++|||+++++.||||
T Consensus 213 ---------~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 213 ---------QD---DHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred ---------cc---CCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 00 0111224567899999999999999999999999999997
No 247
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.6e-39 Score=329.67 Aligned_cols=266 Identities=26% Similarity=0.392 Sum_probs=210.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++|++++.||+|+||.||++.+..+|..||+|++.... .......+.+|+++++.++||||+++++.+... ..+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~ 78 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLNE-----NNI 78 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEecC-----CEE
Confidence 57999999999999999999999999999999886432 233456788999999999999999999998543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|+||||+++ +|.+++...+.+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++.......
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 999999985 899998887889999999999999999999997 589999999999999999999999999986542221
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
. ...+|+..|+|||++.+ ..++.++|||||||++|+|++|+.||...+....... . .
T Consensus 159 ~-----~~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~--------~--------~ 215 (284)
T cd06620 159 A-----DTFVGTSTYMSPERIQG--GKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQD--------D--------P 215 (284)
T ss_pred c-----CccccCcccCCHHHHcc--CCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhh--------h--------h
Confidence 1 23578999999999876 4788899999999999999999999986553211000 0 0
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
......+..+....+..+. ...++..+.+||.+||+.||.+|||++|+++|+||...
T Consensus 216 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 216 MGILDLLQQIVQEPPPRLP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred hHHHHHHHHHhhccCCCCC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 0001111111111111111 11357789999999999999999999999999999653
No 248
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.4e-39 Score=322.60 Aligned_cols=251 Identities=29% Similarity=0.451 Sum_probs=199.4
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
...||+|+||.||+|.+..++..||+|.+... .......+.+|+.+++.++|+||+++++++... ..+++|+|
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~e 85 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPER--DSRYVQPLHEEIALHSYLKHRNIVQYLGSDSEN-----GFFKIFME 85 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCC--CHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccC-----CEEEEEEe
Confidence 45799999999999999999999999988642 234556788999999999999999999988543 46899999
Q ss_pred cCC-ccHHHHHHhC-CCC--CHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEEecccccccccCCCCC
Q 008607 108 LME-SDLHQVIKAN-DDL--TPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 108 ~~~-gdL~~~i~~~-~~l--se~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL~DFGla~~~~~~~~~ 182 (560)
|+. ++|.+++... ..+ ++..+..++.||+.||.|||+.||+||||||+||+++. ++.+||+|||++........
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~- 164 (268)
T cd06624 86 QVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP- 164 (268)
T ss_pred cCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-
Confidence 998 5999998764 445 88999999999999999999999999999999999986 67899999999876533221
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
......++..|+|||.+......++.++|||||||++|+|++|+.||............
T Consensus 165 --~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~------------------- 223 (268)
T cd06624 165 --CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK------------------- 223 (268)
T ss_pred --ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh-------------------
Confidence 12334688999999998653234788999999999999999999999653321110000
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...... .......+++.+.+||++||+.+|.+|||+.|++.||||
T Consensus 224 -----~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 224 -----VGMFKI----HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred -----hhhhcc----CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 000000 011123567889999999999999999999999999997
No 249
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.2e-39 Score=323.66 Aligned_cols=250 Identities=26% Similarity=0.421 Sum_probs=199.5
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHH-HhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLL-RLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL-~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||.|+||.||+|.+..+|+.||||.+.+... .......+..|..++ ..+.|+||+++++++.. ...+|+|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~-----~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS-----KDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-----CCeEEEEE
Confidence 579999999999999999999999999864321 112223445555554 45589999999998843 24689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
||+. ++|.+++...+.+++..++.++.||+.||.|||+.||+||||+|+|||++.++.+||+|||++.....
T Consensus 77 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------- 149 (260)
T cd05611 77 EYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------- 149 (260)
T ss_pred eccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-------
Confidence 9998 49999998888899999999999999999999999999999999999999999999999999875432
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
.....++..|+|||.+.+ ..++.++|||||||++|+|++|..||.+.+.......+..
T Consensus 150 ~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-------------------- 207 (260)
T cd05611 150 NKKFVGTPDYLAPETILG--VGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS-------------------- 207 (260)
T ss_pred cccCCCCcCccChhhhcC--CCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh--------------------
Confidence 123468889999999876 4588999999999999999999999987665433322211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC---CHHHHhcCcccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP---TAEEALADPYFKGL 319 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp---ta~elL~hp~f~~~ 319 (560)
............+++.+.+||.+||+.||.+|| +++|+|.||||+.+
T Consensus 208 -------~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 208 -------RRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred -------cccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 000001112235788999999999999999999 45899999999764
No 250
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2.7e-39 Score=326.15 Aligned_cols=257 Identities=31% Similarity=0.504 Sum_probs=208.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC---CCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~---HpnIv~l~~i~~~~~~~~~~ 100 (560)
.|++.+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+.+++.++ |+|++++++.+... .
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~-----~ 75 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKG-----P 75 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeC-----C
Confidence 5889999999999999999999999999999986432 2234567889999999997 99999999987533 4
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..|+||||+.+ +|.+++... .+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 76 RLWIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred EEEEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 68999999985 898888654 7999999999999999999999999999999999999999999999999999875433
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. ......|+..|+|||.+.+. ..++.++|+|||||++|+|++|..||.+.+.......+.
T Consensus 155 ~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--------------- 215 (277)
T cd06917 155 SS---KRSTFVGTPYWMAPEVITEG-KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP--------------- 215 (277)
T ss_pred cc---ccccccCCcceeCHHHhccC-CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---------------
Confidence 32 12445789999999988542 457889999999999999999999998765433221110
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
...+..+. ...++..+.+||.+||..||++||++.+++.|+||+...
T Consensus 216 ------------~~~~~~~~--~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 216 ------------KSKPPRLE--DNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred ------------cCCCCCCC--cccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 01111111 112678899999999999999999999999999997644
No 251
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.5e-39 Score=322.93 Aligned_cols=256 Identities=21% Similarity=0.361 Sum_probs=202.3
Q ss_pred eEEEEEEeecCCeEEEEEEECC---CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-CCCc
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTR---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-REFK 100 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~---tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~~~~ 100 (560)
|++.+.||+|+||.||+|.+.. ++..||||++............+.+|+.+|+.++|+||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 6788999999999999998765 44789999987544444556778999999999999999999998765443 2334
Q ss_pred cEEEEEecCC-ccHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAN------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
..++||||+. ++|..++... ..+++..++.++.||+.||.|||+.+|+||||||+|||+++++.+||+|||++
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 160 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS 160 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence 5799999998 5898887542 25899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCH
Q 008607 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 174 ~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~ 252 (560)
+......... ......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+....++.+..
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~------- 230 (273)
T cd05035 161 KKIYSGDYYR-QGRIAKMPVKWIAIESLAD--RVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRH------- 230 (273)
T ss_pred eecccccccc-ccccccCCccccCHhhccc--CCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-------
Confidence 8654322111 1112234667999999866 578899999999999999999 8899987664433322211
Q ss_pred HHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
... ......++..+.+||.+||+.||.+|||+.|++++
T Consensus 231 --------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 231 --------------------GNR---LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred --------------------CCC---CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 100 11224567899999999999999999999999863
No 252
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.4e-39 Score=326.93 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=196.3
Q ss_pred EEeecCCeEEEEEEECCCCcEEEEEEecCcccCh-hHHHHHHHHH---HHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-SDATRILREI---KLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~-~~~~~i~rEi---~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
+||+|+||.||+|.+..+++.||+|++....... ........|. .+++...||+|+.+++.+... ..+|+|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP-----DKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecC-----CEEEEE
Confidence 4899999999999999999999999987532221 1122233444 344556799999999888433 468999
Q ss_pred EecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcc
Q 008607 106 FELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~ 184 (560)
|||+. ++|.+++...+.+++..++.|+.|++.||.|||+.+|+||||||+|||++.++.+||+|||++.......
T Consensus 76 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 76 LDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 99998 4899999888889999999999999999999999999999999999999999999999999987542221
Q ss_pred cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHH
Q 008607 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKAR 264 (560)
Q Consensus 185 ~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 264 (560)
....+|+..|+|||++.+. ..++.++||||+||++|+|++|+.||.+...........
T Consensus 152 -~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~-------------------- 209 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR-------------------- 209 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHH--------------------
Confidence 1235799999999998642 458899999999999999999999997653221111000
Q ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCcccccc
Q 008607 265 RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGL 319 (560)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~ 319 (560)
. ...... ......+..+.+||.+||..||.+|| +++++++||||+..
T Consensus 210 -~----~~~~~~---~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 210 -M----TLTMAV---ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred -H----hhccCC---CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 0 000011 11234588999999999999999999 99999999999864
No 253
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-39 Score=344.24 Aligned_cols=252 Identities=26% Similarity=0.411 Sum_probs=197.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCC-----cEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR 96 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg-----~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~ 96 (560)
++|++.+.||+|+||.||+|++..+| ..||||++.... .......+.+|+.+|+.+ +|+||+++++.+...
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~-- 114 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA-HTDEREALMSELKILSHLGQHKNIVNLLGACTHG-- 114 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC-CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC--
Confidence 57999999999999999999865443 579999997432 223456788999999999 899999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhC-------------------------------------------------------
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------- 120 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~------------------------------------------------------- 120 (560)
..+|+|||||. |+|.+++...
T Consensus 115 ---~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (374)
T cd05106 115 ---GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS 191 (374)
T ss_pred ---CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence 46899999998 5999888542
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 121 ---------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 121 ---------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ ..
T Consensus 192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~-~~ 270 (374)
T cd05106 192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNY-VV 270 (374)
T ss_pred cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcce-ee
Confidence 13788899999999999999999999999999999999999999999999999765332211 11
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKAR 264 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 264 (560)
.....++..|+|||++.+ ..++.++|||||||++|+|++ |+.||........+..+..
T Consensus 271 ~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~------------------- 329 (374)
T cd05106 271 KGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVK------------------- 329 (374)
T ss_pred ccCCCCccceeCHHHhcC--CCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHH-------------------
Confidence 122345667999999876 578999999999999999997 9999976543222111110
Q ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 265 RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. .... ......++.+.+||.+||+.||.+|||++++++
T Consensus 330 ----~---~~~~---~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 330 ----R---GYQM---SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred ----c---ccCc---cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 0000 011235789999999999999999999999975
No 254
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9.7e-39 Score=316.07 Aligned_cols=259 Identities=29% Similarity=0.452 Sum_probs=212.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|++|.||+|.+..+++.|++|++............+.+|+.+++.++|+||+++++.+.... ...++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEE
Confidence 488999999999999999999999999999998754433455678889999999999999999999885442 24689
Q ss_pred EEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+|+||++ ++|.+++.....+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||.+.........
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999996 599999988778999999999999999999999999999999999999999999999999999876443321
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
.......++..|+|||.+.+ ..++.++|||||||++|+|++|..||...+. ....+..+
T Consensus 158 -~~~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~---------------- 216 (260)
T cd06606 158 -EGTGSVRGTPYWMAPEVIRG--EEYGRAADIWSLGCTVIEMATGKPPWSELGN--PMAALYKI---------------- 216 (260)
T ss_pred -ccccCCCCCccccCHhhhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHhc----------------
Confidence 01234568889999999876 4588999999999999999999999987651 11111111
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. ...........+..+.+||.+||..||.+||++.+++.||||
T Consensus 217 --------~~--~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 217 --------GS--SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred --------cc--cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 00 001112223457889999999999999999999999999997
No 255
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-40 Score=369.11 Aligned_cols=264 Identities=32% Similarity=0.483 Sum_probs=205.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC-------
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS------- 95 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~------- 95 (560)
+.|+.++.||+|+||.||+|+++-.|..||||+|.... .......+.+|+++|.+|+|||||+++..|....
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 34688899999999999999999999999999998665 5566788999999999999999999988771000
Q ss_pred ---------------------------------------------------------------------c----------
Q 008607 96 ---------------------------------------------------------------------R---------- 96 (560)
Q Consensus 96 ---------------------------------------------------------------------~---------- 96 (560)
+
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0
Q ss_pred ------------------C---C-------CccEEEEEecCCccHHHHHHhCCCC--CHHHHHHHHHHHHHHHHHHHhCC
Q 008607 97 ------------------R---E-------FKDIYVVFELMESDLHQVIKANDDL--TPEHYQFFLYQLLRGLKYIHTAN 146 (560)
Q Consensus 97 ------------------~---~-------~~~i~lV~E~~~gdL~~~i~~~~~l--se~~~~~i~~Qll~aL~yLHs~g 146 (560)
+ + ...+||-||||+.+|.+.+...+.+ ..+.+|++|+||++||+|+|++|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g 717 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG 717 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence 0 0 0247999999997655555554455 48899999999999999999999
Q ss_pred eeeccCCCCCeeeCCCCcEEEeccccccccc----C----------C-CCCcccccccccCccccccccccccc-CCCCC
Q 008607 147 VFHRDLKPKNILANADCKLKICDFGLARVAF----N----------D-TPTAIFWTDYVATRWYRAPELCGSFF-SKYTP 210 (560)
Q Consensus 147 IiHrDLKP~NILl~~~~~lKL~DFGla~~~~----~----------~-~~~~~~~~~~~gT~~Y~APEll~~~~-~~y~~ 210 (560)
||||||||.||++++++.|||+|||+|+... . . .......+..+||--|+|||++.+.. ..|+.
T Consensus 718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~ 797 (1351)
T KOG1035|consen 718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS 797 (1351)
T ss_pred eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence 9999999999999999999999999998721 0 0 01112346789999999999997742 26999
Q ss_pred ccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCC-CCCCCCCCHHH
Q 008607 211 AIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPF-SQKFPNANPLA 289 (560)
Q Consensus 211 ~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~s~~~ 289 (560)
|+||||||+||+||+. ||... .+.... +.+++ +..++. ...+.+--+..
T Consensus 798 KiDmYSLGIVlFEM~y---PF~Ts--MERa~i------------------------L~~LR-~g~iP~~~~f~~~~~~~e 847 (1351)
T KOG1035|consen 798 KIDMYSLGIVLFEMLY---PFGTS--MERASI------------------------LTNLR-KGSIPEPADFFDPEHPEE 847 (1351)
T ss_pred hhhhHHHHHHHHHHhc---cCCch--HHHHHH------------------------HHhcc-cCCCCCCcccccccchHH
Confidence 9999999999999985 46432 222222 22333 222222 23333445677
Q ss_pred HHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 290 LRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 290 ~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
..+|++||+.||.+||||.|+|++-||-
T Consensus 848 ~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 848 ASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred HHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 8999999999999999999999999986
No 256
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.8e-39 Score=328.15 Aligned_cols=255 Identities=26% Similarity=0.405 Sum_probs=209.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|+..+.||.|+||.||+|.+..++..||||.+... ........+.+|+.+++.+.|+||+++++++... ..+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG-----TKL 77 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecc-ccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-----CEE
Confidence 4688899999999999999999999999999998642 2234456788999999999999999999988443 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++ +|.+++.. +.+++..+..++.|++.||+|||+.+|+|+||+|+||+++.++.++|+|||++........
T Consensus 78 ~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06640 78 WIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence 999999985 89888865 4799999999999999999999999999999999999999999999999999976533221
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||++.+ ..++.++|+|||||++|+|++|..||.+.+.......+..
T Consensus 157 ---~~~~~~~~~~y~apE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~---------------- 215 (277)
T cd06640 157 ---KRNTFVGTPFWMAPEVIQQ--SAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK---------------- 215 (277)
T ss_pred ---ccccccCcccccCHhHhcc--CCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhc----------------
Confidence 1133568889999999876 5678999999999999999999999976654332221100
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.. .......++..+.+||.+||..||.+||+++++++|+||...
T Consensus 216 -----------~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 216 -----------NN---PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred -----------CC---CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 00 011223456789999999999999999999999999999754
No 257
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.6e-39 Score=342.44 Aligned_cols=253 Identities=26% Similarity=0.401 Sum_probs=197.6
Q ss_pred CceEEEEEEeecCCeEEEEEEE-----CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR 96 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d-----~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~ 96 (560)
++|++.+.||+|+||.||+|.+ ..++..||||+++... .......+.+|+.+|+.+ +||||+++++++...
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~-- 111 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHINIVNLLGACTVG-- 111 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCc-CcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC--
Confidence 5799999999999999999964 4567789999986432 233456788999999999 799999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC------------------------------------------------------
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND------------------------------------------------------ 121 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~------------------------------------------------------ 121 (560)
...|+|||||+ |+|.+++....
T Consensus 112 ---~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 112 ---GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred ---CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 35899999998 59998886421
Q ss_pred ---------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 122 ---------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 122 ---------------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
.+++..+..|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 37788999999999999999999999999999999999999999999999997653322
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.. .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+......+..+
T Consensus 269 ~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~---------------- 329 (375)
T cd05104 269 NY-VVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKM---------------- 329 (375)
T ss_pred cc-cccCCCCCCcceeChhHhcC--CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHH----------------
Confidence 11 11122345667999999976 578999999999999999998 88999765433221111
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
+... ... ......+..+.+||.+||+.||++|||+.|+++.
T Consensus 330 -------~~~~---~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 330 -------IKEG---YRM---LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred -------HHhC---ccC---CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 1100 000 0112346789999999999999999999999863
No 258
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.1e-39 Score=338.49 Aligned_cols=289 Identities=21% Similarity=0.267 Sum_probs=205.3
Q ss_pred EEEEeec--CCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 28 EEVIGKG--SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 28 ~~~IG~G--~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
...||+| +||+||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++... ..+|+|
T Consensus 3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-----~~~~~v 77 (328)
T cd08226 3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTG-----SWLWVI 77 (328)
T ss_pred HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecC-----CceEEE
Confidence 3457777 999999999999999999999875443444557788999999999999999999998543 358999
Q ss_pred EecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 106 FELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
|||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+|++||+.+.........
T Consensus 78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99998 4899988764 35899999999999999999999999999999999999999999999999866433221111
Q ss_pred c-cc---ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH----
Q 008607 183 A-IF---WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA---- 254 (560)
Q Consensus 183 ~-~~---~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~---- 254 (560)
. .. .....++..|+|||++.+....++.++|||||||++|+|++|++||.+......+..+...........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFP 237 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccc
Confidence 0 00 011234567999999865334578999999999999999999999987765443322222111000000
Q ss_pred --HHHhhh--HHHHH-HHHhhcc-----CC--CCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 255 --IARVRN--EKARR-YLSSMRK-----KK--PIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 255 --~~~~~~--~~~~~-~l~~~~~-----~~--~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
.....+ ..... ....... .. ..........+++.+.+||++||+.||++|||++|+|+||||.....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 238 CEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred hhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 000000 00000 0000000 00 00000112345678999999999999999999999999999986543
No 259
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=6.3e-39 Score=318.50 Aligned_cols=251 Identities=28% Similarity=0.450 Sum_probs=209.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
+|++.+.||+|+||.||++.+..+++.+++|++............+.+|+.+++.++|+||+++++++... ...|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDG-----NKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccC-----CEEE
Confidence 58999999999999999999999999999999875444445566788999999999999999999988543 4689
Q ss_pred EEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 104 VVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+||||+++ +|.+++.. ...+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.....
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~ 155 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKK 155 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence 99999975 89988866 35689999999999999999999999999999999999999999999999999987644
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.. .....++..|++||.+.+ ..++.++|+||||+++++|++|+.||...+.......+..
T Consensus 156 ~~-----~~~~~~~~~~~~Pe~~~~--~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------------- 215 (256)
T cd08530 156 NM-----AKTQIGTPHYMAPEVWKG--RPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQR------------- 215 (256)
T ss_pred CC-----cccccCCccccCHHHHCC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc-------------
Confidence 31 133568889999999876 5788899999999999999999999987664332221111
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
.. +......++..+.++|.+||..||.+|||+.++|+||++
T Consensus 216 --------------~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 216 --------------GK---YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred --------------CC---CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 00 111123567889999999999999999999999999974
No 260
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5e-39 Score=321.10 Aligned_cols=245 Identities=23% Similarity=0.341 Sum_probs=197.3
Q ss_pred EEeecCCeEEEEEEE--CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 30 VIGKGSYGVVCSAYD--TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d--~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
.||+|+||.||+|.+ ..++..+|+|++............+.+|+.+++.+.|+||+++++++.. ...++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA------ESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC------CCcEEEEe
Confidence 589999999999964 4678899999987544444456778899999999999999999987632 24689999
Q ss_pred cCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 108 LME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
|++ ++|.+++.....+++..+..++.||+.||+|||++||+||||||.|||++.++.+||+|||+++............
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 76 LAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 998 5899999887789999999999999999999999999999999999999999999999999997654332211111
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....++..|+|||.+.. ..++.++|||||||++|||++ |+.||.+.+..+....+..
T Consensus 156 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-------------------- 213 (257)
T cd05116 156 THGKWPVKWYAPECMNY--YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-------------------- 213 (257)
T ss_pred CCCCCCccccCHhHhcc--CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC--------------------
Confidence 22344678999999865 568889999999999999998 9999987665443333221
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......+++.+.+||.+||+.||.+||++++|..
T Consensus 214 -------~~~---~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 214 -------GER---MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred -------CCC---CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 111 1122457889999999999999999999998864
No 261
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5e-39 Score=326.85 Aligned_cols=263 Identities=21% Similarity=0.383 Sum_probs=208.3
Q ss_pred ceEEEEEEeecCCeEEEEEEEC---CCCcEEEEEEecCcc--cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~---~tg~~vAiK~i~~~~--~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~ 97 (560)
.|++.+.||.|+||.||+|.+. .+|+.||+|.+.... .......++.+|+.+|+.+ +|+||+.+++.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~---- 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT---- 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeec----
Confidence 3899999999999999999875 478999999986421 1223446678899999999 58999999988743
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
...+|+||||++ ++|.+++.....+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 77 -~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 77 -DTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred -CCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 246899999998 499999988888999999999999999999999999999999999999999999999999999764
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... ......|+..|+|||.+.+....++.++|||||||++|+|++|..||...+.......+.+
T Consensus 156 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~----------- 222 (290)
T cd05613 156 HEDEVE--RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR----------- 222 (290)
T ss_pred cccccc--ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-----------
Confidence 332211 1234678999999999865334577899999999999999999999965432221111111
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC-----CHHHHhcCccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP-----TAEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp-----ta~elL~hp~f~~~~ 320 (560)
.+.... .+ ....+++.+.+||++||+.||.+|+ ++++++.||||+.+.
T Consensus 223 ------------~~~~~~-~~---~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 223 ------------RILKSE-PP---YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred ------------HhhccC-CC---CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 110100 01 1234678899999999999999997 899999999998653
No 262
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=5.2e-39 Score=331.54 Aligned_cols=252 Identities=23% Similarity=0.367 Sum_probs=201.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcE----EEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEK----VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~----vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
..+|++.+.||+|+||.||+|.+..+++. ||||++... ........+.+|+.+++.++||||+++++++...
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~--- 81 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS--- 81 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC---
Confidence 35699999999999999999998766664 899998642 2234456788999999999999999999988543
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
..++|+||+. |+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus 82 ---~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 82 ---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred ---CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccc
Confidence 3589999998 68999998754 689999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
........ ......++..|+|||.+.+ ..++.++|||||||++|||++ |+.||.+.........+..
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~--------- 226 (316)
T cd05108 159 LGADEKEY-HAEGGKVPIKWMALESILH--RIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK--------- 226 (316)
T ss_pred ccCCCcce-eccCCccceeecChHHhcc--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC---------
Confidence 54332211 1122334678999999876 578899999999999999997 9999987654332211110
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.... ...+.++..+.+||.+||..||.+||++.+++.+
T Consensus 227 ------------------~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 227 ------------------GERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred ------------------CCCC---CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 0011 1123467789999999999999999999999975
No 263
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.9e-39 Score=323.65 Aligned_cols=254 Identities=20% Similarity=0.365 Sum_probs=200.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~ 95 (560)
..++|++.+.||+|+||+||+|.+. .++..||||++... ........+.+|+.+++.++|+||+++++++..
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~-- 80 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ-- 80 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--
Confidence 4578999999999999999999864 34578999998642 223345678899999999999999999998843
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCc
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKAND----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK 164 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~~~----------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~ 164 (560)
....++||||+. ++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+|||++.++.
T Consensus 81 ---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~ 157 (277)
T cd05062 81 ---GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 157 (277)
T ss_pred ---CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCC
Confidence 246899999998 58999987532 2577889999999999999999999999999999999999999
Q ss_pred EEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHH
Q 008607 165 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIM 243 (560)
Q Consensus 165 lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i 243 (560)
+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+.+....+..+
T Consensus 158 ~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~ 234 (277)
T cd05062 158 VKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKD--GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV 234 (277)
T ss_pred EEECCCCCccccCCcceee-cCCCCccCHhhcChhHhhc--CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 9999999987543322111 1122355778999999876 578899999999999999999 78999876654433322
Q ss_pred HHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 244 TDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 244 ~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.. ... .......+..+.+||.+||+.||.+|||+.|++++
T Consensus 235 ~~---------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 235 ME---------------------------GGL---LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred Hc---------------------------CCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 11 000 01123467789999999999999999999999864
No 264
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.3e-39 Score=337.96 Aligned_cols=254 Identities=26% Similarity=0.437 Sum_probs=199.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSR 96 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~-----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~ 96 (560)
++|++++.||+|+||.||+|++.. +++.||+|++.... .......+.+|+.+++.+ +|+||+++++.+....
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~- 84 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKPG- 84 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC-
Confidence 689999999999999999997543 45789999987532 223446678999999999 7999999999875432
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhC-------------------------------------------------------
Q 008607 97 REFKDIYVVFELMES-DLHQVIKAN------------------------------------------------------- 120 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~------------------------------------------------------- 120 (560)
..+++||||+.+ +|.+++...
T Consensus 85 ---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 85 ---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred ---CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 368999999984 898888542
Q ss_pred ------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcc
Q 008607 121 ------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRW 194 (560)
Q Consensus 121 ------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~ 194 (560)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ .......++..
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~-~~~~~~~~~~~ 240 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKGDARLPLK 240 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcch-hhccCCCCCcc
Confidence 25789999999999999999999999999999999999999999999999999865332211 11233456778
Q ss_pred cccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccC
Q 008607 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKK 273 (560)
Q Consensus 195 Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~ 273 (560)
|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+.+.... . ..
T Consensus 241 y~aPE~~~~--~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~-----------------------~---~~ 292 (337)
T cd05054 241 WMAPESIFD--KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRL-----------------------K---EG 292 (337)
T ss_pred ccCcHHhcC--CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHH-----------------------h---cc
Confidence 999999876 578999999999999999997 999998754322221110 0 00
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 274 KPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 274 ~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
... ......++.+.+|+.+||+.+|++||+++|+++|
T Consensus 293 ~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 293 TRM---RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 000 1113467889999999999999999999999874
No 265
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=6e-39 Score=322.44 Aligned_cols=256 Identities=22% Similarity=0.382 Sum_probs=201.3
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCc--EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-CCCcc
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGE--KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-REFKD 101 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~--~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~~~~~ 101 (560)
|.+.++||+|+||.||+|.+..++. .||+|.++...........+.+|+.+|+.++|+||+++++.+..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3577899999999999999887775 69999987654455567788899999999999999999998754321 22345
Q ss_pred EEEEEecCC-ccHHHHHHh------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 102 IYVVFELME-SDLHQVIKA------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~------~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.++||||+. ++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 160 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK 160 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence 799999998 589888743 1248899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
......... ......+++.|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.......+.+..
T Consensus 161 ~~~~~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~-------- 229 (272)
T cd05075 161 KIYNGDYYR-QGRIAKMPVKWIAIESLAD--RVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ-------- 229 (272)
T ss_pred ccCccccee-cCCcccCCcccCCHHHccC--CCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--------
Confidence 654322111 1122345678999999876 578899999999999999999 8899987654332222111
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.... ...+.++..+.+||.+||+.||.+|||+++++++
T Consensus 230 -------------------~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 230 -------------------GNRL---KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred -------------------CCCC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1000 1123567889999999999999999999999863
No 266
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.7e-39 Score=325.36 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=202.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~-----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
..+|.+.+.||+|+||.||+|.+.. ++..||||++..... ......+.+|+++|+.++|+||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 80 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTEG-- 80 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEecC--
Confidence 3568999999999999999998753 467899999875322 22456788999999999999999999998543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND--------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~--------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~ 161 (560)
...|+||||+. ++|.+++...+ .+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 81 ---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~ 157 (280)
T cd05049 81 ---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGY 157 (280)
T ss_pred ---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcC
Confidence 46899999998 59999997643 3789999999999999999999999999999999999999
Q ss_pred CCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHH
Q 008607 162 DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQL 240 (560)
Q Consensus 162 ~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~ 240 (560)
++.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+....+
T Consensus 158 ~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~ 234 (280)
T cd05049 158 DLVVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMY--RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVI 234 (280)
T ss_pred CCeEEECCcccceecccCcce-ecCCCCcccceecChhhhcc--CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999999999754322211 11123456788999999876 578999999999999999998 99999876654433
Q ss_pred HHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 241 DIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 241 ~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..+.. ... ......++..+.+||++||+.||.+|||++|+++
T Consensus 235 ~~~~~---------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 235 ECITQ---------------------------GRL---LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHc---------------------------CCc---CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 33221 000 1112356788999999999999999999999985
No 267
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-40 Score=343.81 Aligned_cols=246 Identities=29% Similarity=0.440 Sum_probs=203.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.+++++.||+|-||.||++... ....||+|.++.. ....+.+++|+++|++|+|+|||++++++... ..+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~---~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~-----~pi 276 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEG---SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQ-----EPI 276 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEecc---ccChhHHHHHHHHHHhCcccCeEEEEEEEecC-----Cce
Confidence 45677899999999999999653 2348999998742 33456788999999999999999999999543 259
Q ss_pred EEEEecCC-ccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|||||||. |+|.++++. ...+.......|+.||++|++||+++++|||||-..||||+++..+||+|||||+...++
T Consensus 277 yIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~ 356 (468)
T KOG0197|consen 277 YIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD 356 (468)
T ss_pred EEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC
Confidence 99999998 899999987 446999999999999999999999999999999999999999999999999999954433
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
..... ...--..-|.|||.+.- ..++.++|||||||+|+||+| |+.||++.+..+.++.+.+...-|.
T Consensus 357 ~Y~~~--~~~kfPIkWtAPEa~~~--~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~------- 425 (468)
T KOG0197|consen 357 EYTAS--EGGKFPIKWTAPEALNY--GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPR------- 425 (468)
T ss_pred ceeec--CCCCCCceecCHHHHhh--CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCC-------
Confidence 32211 11122334889999976 689999999999999999999 8899999998887777665433222
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL 311 (560)
.+.+++.+-+|+..||..+|++|||++.+.
T Consensus 426 -----------------------P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 426 -----------------------PEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred -----------------------CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 246889999999999999999999999664
No 268
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.6e-39 Score=334.17 Aligned_cols=275 Identities=24% Similarity=0.308 Sum_probs=201.1
Q ss_pred CCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-ccH
Q 008607 35 SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDL 113 (560)
Q Consensus 35 ~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~-gdL 113 (560)
++|.||.+++..+++.||||++............+.+|+.+|+.++|+||+++++++... ...|++|||+. ++|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~-----~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVD-----SELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecC-----CeEEEEEeccCCCCH
Confidence 556677777788999999999976434455677899999999999999999999988543 45899999998 589
Q ss_pred HHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC----ccccc
Q 008607 114 HQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT----AIFWT 187 (560)
Q Consensus 114 ~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~----~~~~~ 187 (560)
.+++... ..+++..++.+++||+.||+|||+++|+||||||+|||++.++.+||+|||.+......... .....
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~ 166 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPK 166 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccc
Confidence 9988763 46899999999999999999999999999999999999999999999999998754322111 11123
Q ss_pred ccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHH
Q 008607 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYL 267 (560)
Q Consensus 188 ~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l 267 (560)
...++..|+|||++......|+.++|||||||++|+|++|+.||........+ +....+..... +...... ...
T Consensus 167 ~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~--~~~~~~~~~~~-~~~~~~~---~~~ 240 (314)
T cd08216 167 SSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQML--LEKVRGTVPCL-LDKSTYP---LYE 240 (314)
T ss_pred cccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHH--HHHHhccCccc-cccCchh---hhc
Confidence 35678899999998653346889999999999999999999999876543322 11221211100 0000000 000
Q ss_pred Hhhcc--------CCCC-CCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 268 SSMRK--------KKPI-PFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 268 ~~~~~--------~~~~-~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
..+.. .... ........++..+.+||.+||..||.+|||++++|+||||+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 00000 0000 00011123456789999999999999999999999999998765
No 269
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=6e-39 Score=362.93 Aligned_cols=147 Identities=24% Similarity=0.436 Sum_probs=132.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|+++++||+|+||.||+|++..+++.||||++... .........+.+|+.+++.++|+||+.++.++.. ...
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~-----~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS-----ANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-----CCE
Confidence 5799999999999999999999999999999999742 2233345678899999999999999999988743 346
Q ss_pred EEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 102 IYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
+||||||+. ++|.+++...+.+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 899999997 5999999888889999999999999999999999999999999999999999999999999986
No 270
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.1e-38 Score=324.47 Aligned_cols=259 Identities=22% Similarity=0.374 Sum_probs=203.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~-----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.++|++.++||+|+||.||+|.++. .+..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG-- 81 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC--
Confidence 4689999999999999999997652 35589999886432 223445678999999999999999999987433
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcE
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~----------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~l 165 (560)
...|+||||+. |+|.+++.... .++...+..++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 82 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 ---QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred ---CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcE
Confidence 35899999998 69999997532 34667889999999999999999999999999999999999999
Q ss_pred EEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 008607 166 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMT 244 (560)
Q Consensus 166 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~ 244 (560)
||+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+.++.+.
T Consensus 159 ~L~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~--~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 159 KIGDFGMTRDIYETDYYR-KGGKGLLPVRWMAPESLKD--GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred EECcCCcccccccccccc-ccCCCcccccccCHHHhcc--CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999997643322111 1122345678999999876 568899999999999999998 789998765443332221
Q ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc------Cccccc
Q 008607 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA------DPYFKG 318 (560)
Q Consensus 245 ~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~------hp~f~~ 318 (560)
. .. ........++.+.+||.+||+.||++|||+.++++ ||||.+
T Consensus 236 ~---------------------------~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~ 285 (288)
T cd05061 236 D---------------------------GG---YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPE 285 (288)
T ss_pred c---------------------------CC---CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCC
Confidence 1 00 00111245788999999999999999999999987 999986
Q ss_pred c
Q 008607 319 L 319 (560)
Q Consensus 319 ~ 319 (560)
+
T Consensus 286 ~ 286 (288)
T cd05061 286 V 286 (288)
T ss_pred C
Confidence 5
No 271
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=5e-39 Score=320.20 Aligned_cols=253 Identities=30% Similarity=0.505 Sum_probs=205.4
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||.|+||.||++.+..+|+.|++|.+..... .......+.+|+++++.++|+||+++++.+.. ...+|+|+||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-----~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQG-----KKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheec-----CcEEEEEEecC
Confidence 6899999999999999999999999864321 22345678899999999999999999988743 34689999999
Q ss_pred Cc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC-----c
Q 008607 110 ES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT-----A 183 (560)
Q Consensus 110 ~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~-----~ 183 (560)
.+ +|.+++.+.+.+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++......... .
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 84 99999988778999999999999999999999999999999999999999999999999998765332110 1
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
.......++..|+|||.+.. ..++.++|||||||++|+|++|..||...+.......+..
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~------------------ 215 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILG--QGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN------------------ 215 (265)
T ss_pred ccccCcccCccccCHHHhcC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc------------------
Confidence 11234568889999999876 4578899999999999999999999987664433322211
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH---HHHhcCcccccc
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA---EEALADPYFKGL 319 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta---~elL~hp~f~~~ 319 (560)
....+.. ....+..+.+||++||+.||.+|||+ .++|+||||+++
T Consensus 216 ----------~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 216 ----------GKIEWPE-DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred ----------CCcCCCc-cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 0001111 11247889999999999999999999 999999999854
No 272
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.2e-39 Score=329.19 Aligned_cols=255 Identities=28% Similarity=0.417 Sum_probs=206.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|++.+.||+|+||.||+|.+..++..||+|.+.... .......+.+|+.+++.++|+||+++++.+... ..+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 77 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKG-----TKL 77 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-chHHHHHHHHHHHHHHcCCCCccHhhhcccccC-----Cce
Confidence 35778889999999999999999999999999986432 223456788999999999999999999988543 468
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|+||||+++ +|.+++.. +.+++..++.++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++........
T Consensus 78 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06642 78 WIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI 156 (277)
T ss_pred EEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence 999999985 88888764 4799999999999999999999999999999999999999999999999999876432211
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
......++..|+|||.+.+ ..++.++|+|||||++|+|++|+.||...........+.
T Consensus 157 ---~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~----------------- 214 (277)
T cd06642 157 ---KRNTFVGTPFWMAPEVIKQ--SAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP----------------- 214 (277)
T ss_pred ---hhhcccCcccccCHHHhCc--CCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-----------------
Confidence 1233468889999999976 578889999999999999999999997544322211110
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
...+ ......++..+.+||.+||..+|.+||++.++|+||||..+
T Consensus 215 ----------~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 215 ----------KNSP---PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred ----------cCCC---CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 0000 11123457789999999999999999999999999999754
No 273
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1e-38 Score=329.26 Aligned_cols=263 Identities=26% Similarity=0.405 Sum_probs=212.8
Q ss_pred cccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecC
Q 008607 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLP 93 (560)
Q Consensus 15 ~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~ 93 (560)
+|......+.|...+.||+|+||.||+|.+..+|..|++|++..... .......+.+|+.+++.++|+|++++++++..
T Consensus 13 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 92 (313)
T cd06633 13 LFYKDDPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK 92 (313)
T ss_pred HhccCCHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe
Confidence 34445555678888999999999999999999999999999864322 22334578899999999999999999999854
Q ss_pred CCcCCCccEEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccc
Q 008607 94 PSRREFKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL 172 (560)
Q Consensus 94 ~~~~~~~~i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGl 172 (560)
. ...|+||||+.++|.+++.. ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||+
T Consensus 93 ~-----~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~ 167 (313)
T cd06633 93 E-----HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGS 167 (313)
T ss_pred C-----CEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCC
Confidence 3 46899999999998888865 44689999999999999999999999999999999999999999999999998
Q ss_pred cccccCCCCCcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 173 a~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
+..... .....|+..|+|||++... ...++.++|||||||++|+|++|..||.+.+....+..+...
T Consensus 168 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~----- 235 (313)
T cd06633 168 ASKSSP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN----- 235 (313)
T ss_pred CcccCC-------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc-----
Confidence 854211 1345788999999998421 145788999999999999999999999876654443322110
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
..+ ......++..+.+||.+||+.||.+||++.++|.||||..
T Consensus 236 ---------------------~~~---~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~ 278 (313)
T cd06633 236 ---------------------DSP---TLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRR 278 (313)
T ss_pred ---------------------CCC---CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence 000 0112345678999999999999999999999999999984
No 274
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.1e-38 Score=312.36 Aligned_cols=251 Identities=31% Similarity=0.530 Sum_probs=207.9
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|++.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+.+++.++|+||+.+++++... ...+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~ 73 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLKK-----DELW 73 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----CeEE
Confidence 38899999999999999999999999999999975322 3567888999999999999999999988544 4589
Q ss_pred EEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 104 VVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
+++||++ ++|.+++... ..+++..++.++.|++.||++||++|++||||+|+||+++.++.++|+|||.+........
T Consensus 74 l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 74 IVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred EEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 9999999 5999998776 5799999999999999999999999999999999999999999999999999876544332
Q ss_pred CcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.....++..|++||.+.+ ..++.++|||||||++|+|++|+.||...+....+..+..
T Consensus 154 ----~~~~~~~~~~~~PE~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---------------- 211 (253)
T cd05122 154 ----RNTMVGTPYWMAPEVING--KPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT---------------- 211 (253)
T ss_pred ----ccceecCCcccCHHHHcC--CCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----------------
Confidence 234578899999999876 4578899999999999999999999987653333222111
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~ 315 (560)
.. .+.......++..+.+||.+||+.||++|||+.|+|+|||
T Consensus 212 -----------~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 212 -----------NG-PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred -----------cC-CCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 00 0000111124788999999999999999999999999998
No 275
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.2e-38 Score=317.91 Aligned_cols=248 Identities=26% Similarity=0.398 Sum_probs=199.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.+.|++.+.||+|+||.||++... .+..+|+|.+... ......+.+|+.+|+.++||||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 73 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEG---AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQ-----KP 73 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEec-cCceEEEEecccC---CccHHHHHHHHHHHHHCCCCCceeEEEEEccC-----CC
Confidence 357999999999999999999865 4568999987632 22345678899999999999999999988433 46
Q ss_pred EEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||++ ++|.+++... +.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05114 74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDD 153 (256)
T ss_pred EEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCC
Confidence 899999998 5899998753 46899999999999999999999999999999999999999999999999998764332
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||...+..+.+..+....
T Consensus 154 ~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~----------- 218 (256)
T cd05114 154 EYTS--SSGAKFPVKWSPPEVFNF--SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF----------- 218 (256)
T ss_pred ceec--cCCCCCchhhCChhhccc--CccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-----------
Confidence 2111 122345567999999876 578899999999999999999 899998877655544433210
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ....+..+.+||.+||+.||.+||+++++++
T Consensus 219 ----------------~~~~---~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 219 ----------------RLYR---PKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred ----------------CCCC---CCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0000 1234678999999999999999999999985
No 276
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=9.8e-39 Score=322.78 Aligned_cols=253 Identities=22% Similarity=0.373 Sum_probs=200.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~-----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.+.|++.+.||+|+||.||+|.+.. ++..||+|.+.... .......+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-- 81 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC-SEQDESDFLMEALIMSKFNHQNIVRLIGVSFER-- 81 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--
Confidence 4679999999999999999999987 78899999886422 223345688999999999999999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC---cE
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND-------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KL 165 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~-------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~---~l 165 (560)
...|+||||+. ++|.+++.... .+++..+..++.||+.||+|||+++|+||||||+|||++.++ .+
T Consensus 82 ---~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~ 158 (277)
T cd05036 82 ---LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVA 158 (277)
T ss_pred ---CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcce
Confidence 35799999997 59999997653 489999999999999999999999999999999999998765 59
Q ss_pred EEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 008607 166 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMT 244 (560)
Q Consensus 166 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~ 244 (560)
||+|||+++......... .......+..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+....+..+.
T Consensus 159 kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~ 235 (277)
T cd05036 159 KIADFGMARDIYRASYYR-KGGRAMLPIKWMPPEAFLD--GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT 235 (277)
T ss_pred EeccCccccccCCcccee-cCCCCCccHhhCCHHHHhc--CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 999999998653221110 0112233567999999876 578999999999999999997 999998776544333221
Q ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 245 ~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.. .. ......++..+.+||++||+.||++|||+.++|+|
T Consensus 236 ~~---------------------------~~---~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 236 GG---------------------------GR---LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred cC---------------------------Cc---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 10 00 01123567889999999999999999999999986
No 277
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-38 Score=318.41 Aligned_cols=248 Identities=25% Similarity=0.403 Sum_probs=200.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|+++++||+|+||.||+|.+. .+..||+|.+... ......+.+|+.+++.++|+||+++++.+... ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 75 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPG---TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE-----EP 75 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCC---chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCC-----CC
Confidence 467999999999999999999864 5678999987632 22456788999999999999999999887432 45
Q ss_pred EEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+.+|+||||||+||+++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05072 76 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIED 155 (261)
T ss_pred cEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCC
Confidence 899999997 5999998753 4689999999999999999999999999999999999999999999999999986533
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+.......+...
T Consensus 156 ~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~----------- 220 (261)
T cd05072 156 NEYT--AREGAKFPIKWTAPEAINF--GSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG----------- 220 (261)
T ss_pred Ccee--ccCCCccceecCCHHHhcc--CCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-----------
Confidence 2211 1123345678999999876 568889999999999999998 99999876644433322211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... .....++..+.+||.+||..||++||+++++++
T Consensus 221 ----------------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 221 ----------------YRM---PRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred ----------------CCC---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011 122356788999999999999999999999875
No 278
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.2e-38 Score=325.90 Aligned_cols=249 Identities=24% Similarity=0.384 Sum_probs=197.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCc--EEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGE--KVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~--~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~ 99 (560)
++|++.+.||+|+||.||+|.+..++. .+++|.++. .........+.+|+.++..+ +||||+++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~----- 75 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACENR----- 75 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccC-----
Confidence 579999999999999999999887775 468887763 22334456788999999999 699999999987433
Q ss_pred ccEEEEEecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC
Q 008607 100 KDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~ 162 (560)
..+|+||||+. ++|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~ 155 (297)
T cd05089 76 GYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGEN 155 (297)
T ss_pred CcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCC
Confidence 35899999998 59999997542 48899999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 008607 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (560)
Q Consensus 163 ~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~ 241 (560)
+.+||+|||++........ ......+..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+..+...
T Consensus 156 ~~~kl~dfg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~ 229 (297)
T cd05089 156 LASKIADFGLSRGEEVYVK----KTMGRLPVRWMAIESLNY--SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYE 229 (297)
T ss_pred CeEEECCcCCCccccceec----cCCCCcCccccCchhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999864321111 111223456999999876 578899999999999999997 999998776544332
Q ss_pred HHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 242 ~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+.. ... ......++..+.+||.+||..||.+|||++++++.
T Consensus 230 ~~~~---------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 230 KLPQ---------------------------GYR---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHhc---------------------------CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2211 000 01123578899999999999999999999999753
No 279
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=7.3e-39 Score=322.73 Aligned_cols=246 Identities=23% Similarity=0.365 Sum_probs=196.0
Q ss_pred CceEEEEEE--eecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVI--GKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~I--G~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~ 99 (560)
+.|++.+.+ |+|+||.||++.++.++..+|+|.+....... .|+.+...+ .|+||+++++.+...
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~~----- 81 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTTL----- 81 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEecC-----
Confidence 456666666 99999999999999999999999986421111 133333333 699999999998543
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-cEEEeccccccccc
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAF 177 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-~lKL~DFGla~~~~ 177 (560)
..+|+||||++ ++|.+++..+..++++.++.++.||+.||.|||+.||+||||||+||+++.++ .++|+|||++....
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 161 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG 161 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence 36899999997 59999998888899999999999999999999999999999999999999998 99999999987643
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhH-HHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQ-LDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~-~~~i~~~~g~p~~~~~~ 256 (560)
.. ....++..|+|||++.+ ..++.++|||||||++|+|++|+.||........ ...+
T Consensus 162 ~~-------~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~------------- 219 (267)
T PHA03390 162 TP-------SCYDGTLDYFSPEKIKG--HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESL------------- 219 (267)
T ss_pred CC-------ccCCCCCcccChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHH-------------
Confidence 21 23468899999999976 5788999999999999999999999975432210 0000
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-HHHHhcCcccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-AEEALADPYFK 317 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-a~elL~hp~f~ 317 (560)
.... . ......+..++.+.+||.+||+.||.+|++ ++|+|+||||.
T Consensus 220 ----------~~~~--~---~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 220 ----------LKRQ--Q---KKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred ----------HHhh--c---ccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 0101 0 011223468899999999999999999996 59999999996
No 280
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.1e-38 Score=319.58 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=201.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|++..+++.||||++... .........+.+|+.+|+.++||||+++++.+... ..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIED-----NE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEEC-----Ce
Confidence 5799999999999999999999999999999988642 22334456788999999999999999999988543 46
Q ss_pred EEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 102 IYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+|+|+||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~ 156 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceec
Confidence 8999999994 88887753 345899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
..... ......++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ....+
T Consensus 157 ~~~~~---~~~~~~~~~~~~aPE~~~~--~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~-~~~~~------------- 217 (267)
T cd08228 157 SSKTT---AAHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LFSLC------------- 217 (267)
T ss_pred cchhH---HHhcCCCCccccChhhhcc--CCCCchhhHHHHHHHHHHHhcCCCCCcccccc-HHHHH-------------
Confidence 32221 1234568889999999876 56788999999999999999999999654321 00100
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..+...... .......+..+.+||.+||..||.+||++.++|+
T Consensus 218 -----------~~~~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 218 -----------QKIEQCDYP--PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred -----------HHHhcCCCC--CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 000000000 0111245678999999999999999999999986
No 281
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.2e-38 Score=322.19 Aligned_cols=254 Identities=28% Similarity=0.431 Sum_probs=207.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
-|++.+.||+|+||.||+|.+..+++.||||.+... ........+.+|+.+++.++|+||+++++.+... ...|
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 78 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE-EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-----TKLW 78 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccc-cchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeC-----CeEE
Confidence 478899999999999999999999999999987642 2223456788999999999999999999988433 4689
Q ss_pred EEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+||||+++ +|.+++.. ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......
T Consensus 79 lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 79 IIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred EEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 99999985 88888764 469999999999999999999999999999999999999999999999999987543221
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
.......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||...+.......+..
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~----------------- 215 (277)
T cd06641 156 -IKRNTFVGTPFWMAPEVIKQ--SAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPK----------------- 215 (277)
T ss_pred -hhhccccCCccccChhhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhc-----------------
Confidence 11234578899999999876 5678899999999999999999999976553322221110
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.. .......++..+.++|.+||..||.+||++.++++||||...
T Consensus 216 ----------~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 216 ----------NN---PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred ----------CC---CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 00 011223567889999999999999999999999999999853
No 282
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=8.7e-39 Score=328.11 Aligned_cols=249 Identities=24% Similarity=0.402 Sum_probs=196.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcE--EEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEK--VAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~--vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~ 99 (560)
+.|++.+.||+|+||.||+|.+..++.. +++|.+... ........+.+|+.+|..+ +|+||+++++++...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~----- 80 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR----- 80 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCC-----
Confidence 5799999999999999999999888764 577776532 2233456788999999999 899999999988433
Q ss_pred ccEEEEEecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC
Q 008607 100 KDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~ 162 (560)
..+|+||||+. ++|.+++...+ .+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGEN 160 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCC
Confidence 46899999998 59999987542 47899999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 008607 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (560)
Q Consensus 163 ~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~ 241 (560)
+.+||+|||++......... ....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+..+..+
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~----~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 234 (303)
T cd05088 161 YVAKIADFGLSRGQEVYVKK----TMGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE 234 (303)
T ss_pred CcEEeCccccCcccchhhhc----ccCCCcccccCHHHHhc--cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHH
Confidence 99999999998642211110 11234567999999866 568899999999999999998 999998766443322
Q ss_pred HHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 242 ~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+. ..... ......++.+.+||.+||+.||++||+++++|++
T Consensus 235 ~~~---------------------------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 235 KLP---------------------------QGYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHh---------------------------cCCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 211 00000 1112467889999999999999999999999875
No 283
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.2e-38 Score=316.91 Aligned_cols=245 Identities=23% Similarity=0.406 Sum_probs=193.5
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~ 108 (560)
+.||+|+||.||+|.+..+++.||+|.+.... .......+.+|+++|+.++|+||+++++++... ..+|+||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~ 74 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-----QPIYIVMEL 74 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----CCeEEEEee
Confidence 46999999999999999999999999886432 233456788999999999999999999988543 468999999
Q ss_pred CC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 109 ME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 109 ~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
+. ++|.+++...+ .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++.......... ..
T Consensus 75 ~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-~~ 153 (252)
T cd05084 75 VQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYAS-TG 153 (252)
T ss_pred ccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccc-cC
Confidence 97 58999987644 68999999999999999999999999999999999999999999999999987543221110 00
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
.....+..|+|||.+.+ ..++.++|||||||++|+|++ |..||...+.......+..
T Consensus 154 ~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~-------------------- 211 (252)
T cd05084 154 GMKQIPVKWTAPEALNY--GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ-------------------- 211 (252)
T ss_pred CCCCCceeecCchhhcC--CCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc--------------------
Confidence 11123456999999876 568899999999999999997 8899965543222111111
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..... .....+..+.+||++||+.||++|||+.++++
T Consensus 212 -------~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 212 -------GVRLP---CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred -------CCCCC---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 11111 12345788999999999999999999999974
No 284
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-38 Score=323.56 Aligned_cols=260 Identities=32% Similarity=0.527 Sum_probs=214.7
Q ss_pred cCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 19 YGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 19 ~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
-...+.|++.+.||.|+||.||+|.+..++..|++|++..... ....+.+|+.+++.++|+||+++++.+...
T Consensus 15 ~~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---- 87 (286)
T cd06614 15 GDPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLVG---- 87 (286)
T ss_pred CCccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEEC----
Confidence 3456779999999999999999999999999999999874322 456788999999999999999999988554
Q ss_pred CccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+|+||++ ++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++...
T Consensus 88 -~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~ 166 (286)
T cd06614 88 -DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL 166 (286)
T ss_pred -CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence 46899999999 59999998876 8999999999999999999999999999999999999999999999999998654
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
..... ......++..|++||.+.+ ..++.++|+|||||++|+|++|+.||.+.+.......+..
T Consensus 167 ~~~~~---~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~----------- 230 (286)
T cd06614 167 TKEKS---KRNSVVGTPYWMAPEVIKR--KDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITT----------- 230 (286)
T ss_pred ccchh---hhccccCCcccCCHhHhcC--CCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------
Confidence 32211 1123457889999999876 5688999999999999999999999987655433222211
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
... +.......++..+.+||.+||+.||.+|||+.++|+|+||++.
T Consensus 231 ----------------~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 231 ----------------KGI-PPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred ----------------cCC-CCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 000 0111123467889999999999999999999999999999873
No 285
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.2e-38 Score=317.76 Aligned_cols=253 Identities=25% Similarity=0.394 Sum_probs=201.7
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCC---CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~t---g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.++|++.+.||+|+||+||+|.+..+ ...||||.+.... .......+.+|+.+|+.++|+||+++++.+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKS---- 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecC----
Confidence 46799999999999999999988654 4579999886432 233456788999999999999999999987432
Q ss_pred CccEEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+||||+.+ +|.+++... +.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 78 -~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 78 -RPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred -CceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 458999999985 899998764 46899999999999999999999999999999999999999999999999999876
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||...........+.+..
T Consensus 157 ~~~~~~-~~~~~~~~~~~y~~Pe~~~~--~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-------- 225 (266)
T cd05033 157 EDSEAT-YTTKGGKIPIRWTAPEAIAY--RKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY-------- 225 (266)
T ss_pred cccccc-eeccCCCCCccccChhhhcc--CCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC--------
Confidence 421111 11112345678999999876 578899999999999999998 999997655443333222110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
..+ ....++..+.+|+.+||+.||.+||+++|++++
T Consensus 226 -------------------~~~---~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 226 -------------------RLP---PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred -------------------CCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 001 123567889999999999999999999999864
No 286
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.6e-38 Score=323.20 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=201.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
...|.+.+.||+|+||.||++.+. .++..+|+|.+... .......+.+|+.+|+.++|+||+++++.+...
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 79 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG-- 79 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC--
Confidence 467999999999999999999863 35567999988642 233456788999999999999999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC-------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND-------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~-------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~ 162 (560)
..+|+||||+. ++|.+++...+ .+++..++.++.||+.||+|||+.||+||||||+|||++.+
T Consensus 80 ---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~ 156 (288)
T cd05093 80 ---DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGEN 156 (288)
T ss_pred ---CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence 46899999998 59999987543 48999999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 008607 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (560)
Q Consensus 163 ~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~ 241 (560)
+.+||+|||+++....... ........++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+.
T Consensus 157 ~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~ 233 (288)
T cd05093 157 LLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMY--RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 233 (288)
T ss_pred CcEEeccCCccccccCCce-eecCCCCCccccccCHHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999975432221 111233456778999999876 578899999999999999998 999998766544333
Q ss_pred HHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 242 ~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.+.. .... ......+..+.+||.+||+.||.+|||+.++++
T Consensus 234 ~i~~---------------------------~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 234 CITQ---------------------------GRVL---QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHc---------------------------CCcC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 3221 1111 112246788999999999999999999999964
No 287
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=1.7e-38 Score=328.00 Aligned_cols=258 Identities=28% Similarity=0.435 Sum_probs=209.5
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.....|+..+.||+|+||.||++.+..++..||+|++.... ........+.+|+.+++.++|+|++++++++...
T Consensus 22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 97 (317)
T cd06635 22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLRE---- 97 (317)
T ss_pred CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC----
Confidence 34455999999999999999999999999999999986432 2233446788999999999999999999988543
Q ss_pred CccEEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 99 FKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
...|+||||+.|+|.+.+.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.++.+||+|||++....
T Consensus 98 -~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 98 -HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred -CeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 35899999999998888765 4569999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
.. ....++..|+|||.+... ...++.++|||||||++|+|++|+.||.+.+....+..+...
T Consensus 177 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~---------- 239 (317)
T cd06635 177 PA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN---------- 239 (317)
T ss_pred Cc-------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc----------
Confidence 21 235688999999997421 245788999999999999999999999776544333322210
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
..+ ......+++.+.+||.+||+.||.+||++.++++|+|+..
T Consensus 240 ----------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 240 ----------------ESP---TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred ----------------cCC---CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 000 0112346778999999999999999999999999999853
No 288
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.6e-38 Score=315.67 Aligned_cols=246 Identities=26% Similarity=0.429 Sum_probs=202.4
Q ss_pred EEEeecCCeEEEEEEECCC---CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~t---g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
+.||+|+||.||+|.+... +..|++|.+....... ....+.+|+.+++.++|+||+++++++.. ...+++|
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-----~~~~~lv 74 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE-----EEPLYLV 74 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC-----CCceEEE
Confidence 4699999999999999866 8999999997543332 46778899999999999999999998854 3468999
Q ss_pred EecCC-ccHHHHHHhC---------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 106 FELME-SDLHQVIKAN---------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~---------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
|||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||.+..
T Consensus 75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 154 (262)
T cd00192 75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRD 154 (262)
T ss_pred EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccc
Confidence 99995 6999999875 6799999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
...... ........++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+....+....+..
T Consensus 155 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--------- 222 (262)
T cd00192 155 VYDDDY-YRKKTGGKLPIRWMAPESLKD--GIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--------- 222 (262)
T ss_pred cccccc-cccccCCCcCccccCHHHhcc--CCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc---------
Confidence 543321 111234567889999999876 478899999999999999999 6999988755443332221
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.. .......++..+.++|.+||..||.+|||++|++++
T Consensus 223 ------------------~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 223 ------------------GY---RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred ------------------CC---CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00 111224558899999999999999999999999875
No 289
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=2.5e-38 Score=316.56 Aligned_cols=248 Identities=25% Similarity=0.396 Sum_probs=199.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|++.+.||+|+||.||+|.+. +++.||+|.+.... .....+.+|+.+++.++|+||+++++++... ..
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT---MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLE-----EP 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc---ccHHHHHHHHHHHHHCCCCCccceeEEEecC-----CC
Confidence 367999999999999999999875 45789999986422 2345688999999999999999999987432 46
Q ss_pred EEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.|+||||+. ++|.+++.... .+++..+..++.|++.||.|||+.||+||||||+|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 155 (261)
T cd05068 76 IYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKE 155 (261)
T ss_pred eeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccC
Confidence 899999995 69999997654 699999999999999999999999999999999999999999999999999987642
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..... ......+..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+....+..+...
T Consensus 156 ~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----------- 220 (261)
T cd05068 156 DIYEA--REGAKFPIKWTAPEAALY--NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG----------- 220 (261)
T ss_pred Ccccc--cCCCcCceeccCcccccc--CCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------
Confidence 22111 111223457999999876 578899999999999999999 99999877654433332211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......+..+.+||.+||+.||.+||++.++++
T Consensus 221 ----------------~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 221 ----------------YRM---PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred ----------------CCC---CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 001 112356788999999999999999999999874
No 290
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1e-38 Score=326.13 Aligned_cols=256 Identities=27% Similarity=0.516 Sum_probs=208.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.|....+||+|+||.||++.+..+|+.||||++... .......+.+|+.+++.++|+||+++++.+... ...|
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-----~~~~ 93 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR--KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG-----DELW 93 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc--chhHHHHHHHHHHHHHhcCCcchhheeeEEEeC-----CEEE
Confidence 344457899999999999999999999999998632 223456688999999999999999999988543 4689
Q ss_pred EEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 104 VVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
+||||+++ +|.+++. ...+++..++.++.||+.||+|||+.||+||||+|+||+++.++.++|+|||++........
T Consensus 94 lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~- 171 (292)
T cd06657 94 VVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP- 171 (292)
T ss_pred EEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc-
Confidence 99999985 7877664 45789999999999999999999999999999999999999999999999999875433221
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEK 262 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~ 262 (560)
......++..|+|||.+.+ ..++.++|+||+||++|+|++|..||.+.+....+..+..
T Consensus 172 --~~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~----------------- 230 (292)
T cd06657 172 --RRKSLVGTPYWMAPELISR--LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD----------------- 230 (292)
T ss_pred --cccccccCccccCHHHhcC--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-----------------
Confidence 1234578899999999876 5678899999999999999999999987665443332221
Q ss_pred HHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 263 ARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
..+.. ......+++.+.+||.+||+.||.+||++.++|+||||....
T Consensus 231 ----------~~~~~-~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 231 ----------NLPPK-LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred ----------hCCcc-cCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 00111 112245688899999999999999999999999999998765
No 291
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-38 Score=321.28 Aligned_cols=252 Identities=21% Similarity=0.383 Sum_probs=200.9
Q ss_pred CceEEEEEEeecCCeEEEEEEE----CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYD----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d----~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
+.|++.+.||+|+||+||+|.+ ..++..||+|.+.... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---- 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQE---- 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecC----
Confidence 4689999999999999999985 3456789999987432 233446788999999999999999999987543
Q ss_pred CccEEEEEecCC-ccHHHHHHhC-----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 99 FKDIYVVFELME-SDLHQVIKAN-----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~-----------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
...|+||||+. ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 80 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~ 158 (283)
T cd05090 80 -QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG 158 (283)
T ss_pred -CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence 35899999998 5999988532 2478899999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhH
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~ 239 (560)
.++.+||+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+....
T Consensus 159 ~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05090 159 EQLHVKISDLGLSREIYSADYYR-VQPKSLLPIRWMPPEAIMY--GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV 235 (283)
T ss_pred CCCcEEeccccccccccCCccee-cccCCCccceecChHHhcc--CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 99999999999997653322111 1233455678999999876 568899999999999999998 9999987664433
Q ss_pred HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 240 LDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 240 ~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
+..+.. .... .....+++.+.+||.+||+.||.+||++.+++++
T Consensus 236 ~~~~~~---------------------------~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 236 IEMVRK---------------------------RQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred HHHHHc---------------------------CCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 332211 1111 1223567899999999999999999999999864
No 292
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.1e-38 Score=317.98 Aligned_cols=248 Identities=28% Similarity=0.397 Sum_probs=198.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
..++|++.++||+|+||.||+|.+..+ ..||+|++.... .....+.+|+.+++.++|+||+++++.+.. .
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~---~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~ 73 (262)
T cd05071 4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE------E 73 (262)
T ss_pred ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc---cCHHHHHHHHHHHHhCCCCCcceEEEEECC------C
Confidence 347899999999999999999988665 469999987422 233567899999999999999999887622 2
Q ss_pred cEEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..|+||||+. ++|.+++... ..++++.+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~ 153 (262)
T cd05071 74 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 153 (262)
T ss_pred CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecc
Confidence 4799999998 5999999763 358999999999999999999999999999999999999999999999999997653
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+......+..+...
T Consensus 154 ~~~~~~--~~~~~~~~~y~~PE~~~~--~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~---------- 219 (262)
T cd05071 154 DNEYTA--RQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---------- 219 (262)
T ss_pred cccccc--ccCCcccceecCHhHhcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC----------
Confidence 322111 122346678999999866 578899999999999999999 88999876544433322110
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... .....++..+.+||.+||+.||.+||+++++++
T Consensus 220 -----------------~~~---~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 220 -----------------YRM---PCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred -----------------CCC---CCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 000 112356788999999999999999999999875
No 293
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.6e-38 Score=325.35 Aligned_cols=258 Identities=27% Similarity=0.417 Sum_probs=208.2
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
...+|...+.||+|+||.||+|++..++..+|+|.+.... .......++.+|+++++.++|+|++++++++...
T Consensus 13 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 87 (308)
T cd06634 13 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE----- 87 (308)
T ss_pred cHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcC-----
Confidence 4456888999999999999999999999999999986422 2223445788999999999999999999988543
Q ss_pred ccEEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
...|+||||+.++|.+++.. ...+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||++.....
T Consensus 88 ~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 88 HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred CeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 35899999999988887754 44689999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCcccccccccCcccccccccccc-cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~-~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
. ....++..|+|||.+.+. ...++.++|||||||++|+|++|..||...+....+..+..
T Consensus 168 ~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~------------ 228 (308)
T cd06634 168 A-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ------------ 228 (308)
T ss_pred c-------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhh------------
Confidence 1 235688899999997431 13578899999999999999999999976543332221111
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
... + ......++..+.+||++||..+|.+||++++++.|||+...
T Consensus 229 --------------~~~--~-~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 229 --------------NES--P-ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred --------------cCC--C-CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 000 0 01123567889999999999999999999999999999763
No 294
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.2e-38 Score=318.18 Aligned_cols=253 Identities=26% Similarity=0.425 Sum_probs=202.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCc---EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~---~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
..+|++.+.||+|+||.||+|.+..++. .+|+|.+.... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS---- 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC----
Confidence 4689999999999999999999876554 79999886432 233456788999999999999999999988432
Q ss_pred CccEEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+||||++ ++|.+++... +.+++..+..++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 78 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 78 -KPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred -CccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 46899999998 5899999765 46899999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
..............++..|+|||.+.+ ..++.++|+|||||++|+|++ |..||.+.+..+....+.+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-------- 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-------- 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhcc--CccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC--------
Confidence 433221111122233567999999976 578899999999999999886 999998766544433332211
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..+ ....+++.+.+|+.+||+.+|.+||++.++++
T Consensus 227 -------------------~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 227 -------------------RLP---APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred -------------------cCC---CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 011 12346788999999999999999999999975
No 295
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.3e-38 Score=316.13 Aligned_cols=245 Identities=21% Similarity=0.322 Sum_probs=196.0
Q ss_pred EEEeecCCeEEEEEEECCCC---cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTG---EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg---~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
++||+|+||.||+|....++ ..+|+|.+...... .....+.+|+.+++.+.|+||+++++++.. ..+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v 73 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCKG------EPLMLV 73 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC------CceEEE
Confidence 46999999999999876554 78999998753322 455678899999999999999999997632 257999
Q ss_pred EecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcc
Q 008607 106 FELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~ 184 (560)
|||+. ++|.+++..+..+++..+..++.||+.||+|||+.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~ 153 (257)
T cd05060 74 MELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYR 153 (257)
T ss_pred EEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccc
Confidence 99998 59999998888899999999999999999999999999999999999999999999999999986543322111
Q ss_pred cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHH
Q 008607 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKA 263 (560)
Q Consensus 185 ~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~ 263 (560)
......++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||...+..+....+..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~------------------ 213 (257)
T cd05060 154 ATTAGRWPLKWYAPECINY--GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES------------------ 213 (257)
T ss_pred cccCccccccccCHHHhcC--CCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc------------------
Confidence 1111223457999999876 578899999999999999998 9999977665433322211
Q ss_pred HHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 264 RRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 264 ~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. .. ......++..+.+||.+||..||++||++.++++
T Consensus 214 ------~---~~---~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 214 ------G---ER---LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred ------C---Cc---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 0 00 1122456788999999999999999999999975
No 296
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.3e-38 Score=317.97 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=198.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
...|++.+.||+|+||.||++.+. ++..+|+|++.... .....+.+|+++++.++|+||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 73 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA---MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQ-----RP 73 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCC-----Cc
Confidence 346899999999999999999875 56789999986422 2234678899999999999999999987433 46
Q ss_pred EEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.|+||||++ ++|.+++..+ ..++++.++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~ 153 (256)
T cd05059 74 IFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDD 153 (256)
T ss_pred eEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccc
Confidence 899999997 4899998764 46899999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+..+....+...
T Consensus 154 ~~~~--~~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~------------ 217 (256)
T cd05059 154 QYTS--SQGTKFPVKWAPPEVFDY--SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG------------ 217 (256)
T ss_pred cccc--cCCCCCCccccCHHHhcc--CCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC------------
Confidence 2111 111223457999999876 578899999999999999999 89999876544333222110
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
... .....++..+.+|+.+||..+|++|||++|+++.
T Consensus 218 ---------------~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 218 ---------------YRL---YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred ---------------CcC---CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 000 1123468899999999999999999999999863
No 297
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=3.2e-38 Score=316.79 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=201.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCc---EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~---~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.+.|+..+.||+|+||.||+|.+..++. .+|+|++.... .......+.+|+++++.++|+||+++.+++...
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---- 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKF---- 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccC----
Confidence 4679999999999999999999887665 79999886432 233456788999999999999999999988433
Q ss_pred CccEEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
...|+||||+++ +|.+++... +.+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||++...
T Consensus 79 -~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 79 -KPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred -CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 458999999985 898888764 57899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...............+..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~------- 228 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAY--RKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFR------- 228 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhc--CCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCC-------
Confidence 433221111111223457999999876 568899999999999999997 9999987665444443322110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.+ ....++..+.+|+.+||+.||.+||++.++++
T Consensus 229 --------------------~~---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 229 --------------------LP---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred --------------------CC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 01 11245788999999999999999999999975
No 298
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.8e-39 Score=319.29 Aligned_cols=247 Identities=26% Similarity=0.417 Sum_probs=202.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|++.++||.|+||.||+|.+.. +..+|+|++... .......+.+|+.+|+.++|+||+++++++... ..+
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~ 77 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSD--DLLKQQDFQKEVQALKRLRHKHLISLFAVCSVG-----EPV 77 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecC-CCcEEEEecccc--chhhHHHHHHHHHHHhcCCCcchhheeeeEecC-----CCe
Confidence 458999999999999999999987 899999998742 233456788999999999999999999987433 458
Q ss_pred EEEEecCCc-cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELMES-DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|+||||+++ +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred EEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 999999985 999999763 36899999999999999999999999999999999999999999999999999765332
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
... .....++..|+|||.+.. ..++.++|||||||++|+|++ |+.||.+.+..+.+..+.....
T Consensus 158 ~~~---~~~~~~~~~~~~PE~~~~--~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---------- 222 (261)
T cd05148 158 VYL---SSDKKIPYKWTAPEAASH--GTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR---------- 222 (261)
T ss_pred ccc---ccCCCCceEecCHHHHcc--CCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc----------
Confidence 211 123345678999999876 578899999999999999998 8999988765444433321100
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. ......++.+.++|.+||+.||.+|||+.++++
T Consensus 223 -----------------~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 223 -----------------M---PCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred -----------------C---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 112456788999999999999999999999975
No 299
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.3e-38 Score=316.68 Aligned_cols=247 Identities=27% Similarity=0.385 Sum_probs=198.7
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+..... ....+.+|+.+++.++|+||+++++.+.. ..
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~---~~~~~~~E~~~l~~l~~~~i~~~~~~~~~------~~ 74 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM---SPESFLEEAQIMKKLRHDKLVQLYAVVSE------EP 74 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC---CHHHHHHHHHHHHhcCCCceEEEEeEECC------CC
Confidence 457999999999999999999765 566799999874222 24568899999999999999999987632 24
Q ss_pred EEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+|+||||+. ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05070 75 IYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIED 154 (260)
T ss_pred cEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccC
Confidence 799999998 5999998763 3589999999999999999999999999999999999999999999999999976533
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..... .....++..|+|||++.+ ..++.++|||||||++|+|++ |.+||.+.+..+.+..+...
T Consensus 155 ~~~~~--~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~----------- 219 (260)
T cd05070 155 NEYTA--RQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG----------- 219 (260)
T ss_pred ccccc--ccCCCCCccccChHHHhc--CCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-----------
Confidence 22111 122345667999999866 578899999999999999999 89999877655444433211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......+..+.+||.+||..||.+|||++++++
T Consensus 220 ----------------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 220 ----------------YRM---PCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred ----------------CCC---CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 011 112356788999999999999999999999874
No 300
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=4.2e-38 Score=314.82 Aligned_cols=253 Identities=28% Similarity=0.461 Sum_probs=201.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|.+..+|+.||+|.++.. .........+.+|+++++.++|+||+.+++.+... ..
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~-----~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIEN-----NE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----Ce
Confidence 5799999999999999999999999999999988632 22333456788999999999999999999988543 46
Q ss_pred EEEEEecCC-ccHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 102 IYVVFELME-SDLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
.++||||++ ++|.+++.. ...++++.++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~ 156 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeec
Confidence 899999998 499988864 235899999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ..+
T Consensus 157 ~~~~~~---~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~--------------- 215 (267)
T cd08224 157 SSKTTA---AHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN-LYS--------------- 215 (267)
T ss_pred cCCCcc---cceecCCccccCHHHhcc--CCCCchhcHHHHHHHHHHHHHCCCCcccCCcc-HHH---------------
Confidence 322211 234568899999999876 57889999999999999999999999654311 000
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..+.+......+. .....+..+.++|.+||..||.+|||+.++++
T Consensus 216 ---------~~~~~~~~~~~~~--~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 216 ---------LCKKIEKCDYPPL--PADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred ---------HHhhhhcCCCCCC--ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 0011100000000 01246778999999999999999999999875
No 301
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.7e-38 Score=321.93 Aligned_cols=259 Identities=22% Similarity=0.323 Sum_probs=203.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCC----------------cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG----------------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg----------------~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (560)
.++|++++.||+|+||.||+|.+..++ ..||+|++.... .......+.+|+++|+.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 357999999999999999999877644 457999987432 224566788999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-ccHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 008607 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND-----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~-----------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK 153 (560)
++++++... ...++|||++. ++|.+++.... .+++..++.++.||+.||+|||+.||+|||||
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 83 RLLGVCTVD-----PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred EEEEEEecC-----CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 999988543 46899999998 58999987765 68999999999999999999999999999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh--CCCCC
Q 008607 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLF 231 (560)
Q Consensus 154 P~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt--G~~pF 231 (560)
|+|||++.++.++|+|||+++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~~~~~p~ 234 (296)
T cd05051 158 TRNCLVGKNYTIKIADFGMSRNLYSSDYY-RVQGRAPLPIRWMAWESVLL--GKFTTKSDVWAFGVTLWEILTLCREQPY 234 (296)
T ss_pred hhceeecCCCceEEccccceeecccCcce-eecCcCCCCceecCHHHhhc--CCCCccchhhhhHHHHHHHHhcCCCCCC
Confidence 99999999999999999998764332211 11233456788999999876 578899999999999999998 67888
Q ss_pred CCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008607 232 PGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311 (560)
Q Consensus 232 ~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL 311 (560)
...+....+..+.... ............+.++..+.+||.+||+.||.+|||+.|++
T Consensus 235 ~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~ 291 (296)
T cd05051 235 EHLTDQQVIENAGHFF-----------------------RDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIH 291 (296)
T ss_pred CCcChHHHHHHHHhcc-----------------------ccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHH
Confidence 7655444333222111 00001111112245678999999999999999999999996
Q ss_pred c
Q 008607 312 A 312 (560)
Q Consensus 312 ~ 312 (560)
+
T Consensus 292 ~ 292 (296)
T cd05051 292 L 292 (296)
T ss_pred H
Confidence 5
No 302
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.4e-38 Score=322.06 Aligned_cols=253 Identities=26% Similarity=0.448 Sum_probs=201.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCC-----cEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg-----~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~ 95 (560)
.++|++.+.||+|+||.||++.+.... ..+|+|.+.... .......+.+|+.+++.+ +|+||+++++++...
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~- 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE- 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC-
Confidence 368999999999999999999876443 789999987432 233456788999999999 799999999988433
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHh----------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCee
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKA----------------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~----------------~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NIL 158 (560)
..+|+||||+. ++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 89 ----~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil 164 (293)
T cd05053 89 ----GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL 164 (293)
T ss_pred ----CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence 45899999997 599999864 235889999999999999999999999999999999999
Q ss_pred eCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChh
Q 008607 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVV 237 (560)
Q Consensus 159 l~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~ 237 (560)
++.++.+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+..
T Consensus 165 ~~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 165 VTEDHVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred EcCCCeEEeCcccccccccccccee-ccCCCCCCccccCHHHhcc--CCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9999999999999998654322111 1122334567999999866 578899999999999999997 99999877654
Q ss_pred hHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 238 HQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 238 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
+....+.. ... .......+..+.+||.+||..||++|||+.|++++
T Consensus 242 ~~~~~~~~---------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 242 ELFKLLKE---------------------------GYR---MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHHc---------------------------CCc---CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 43332211 000 01123567889999999999999999999999874
No 303
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.4e-38 Score=315.34 Aligned_cols=249 Identities=22% Similarity=0.339 Sum_probs=198.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.+.|++.+.||+|+||+||++.+.. +..+|||.+.... .....+.+|+.+++.++||||+++++++... ..
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~ 73 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGS---MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQ-----RP 73 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCc---ccHHHHHHHHHHHhcCCCCCeeeEEEEEccC-----CC
Confidence 4579999999999999999997654 4569999886422 2345688999999999999999999988433 35
Q ss_pred EEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||+. ++|.+++.... .+++..++.++.||+.||+|||+.||+|+||||+|||++.++.+||+|||+++.....
T Consensus 74 ~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~ 153 (256)
T cd05113 74 IYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDD 153 (256)
T ss_pred cEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCC
Confidence 799999997 58999987643 6899999999999999999999999999999999999999999999999998765332
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||...+..+....+...
T Consensus 154 ~~~~--~~~~~~~~~y~~pe~~~~--~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~------------ 217 (256)
T cd05113 154 EYTS--SVGSKFPVRWSPPEVLLY--SKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG------------ 217 (256)
T ss_pred ceee--cCCCccChhhCCHHHHhc--CcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC------------
Confidence 2111 112335677999999976 568899999999999999998 99999776644333322211
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.... .....+..+.+|+.+||..||.+|||+.+++.+
T Consensus 218 ---------------~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 218 ---------------LRLY---RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred ---------------CCCC---CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 0000 112357889999999999999999999999864
No 304
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=4.9e-38 Score=317.79 Aligned_cols=252 Identities=23% Similarity=0.351 Sum_probs=200.6
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCc----EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~----~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
..++|++.++||+|+||+||+|.+..++. .||+|.+... ........+.+|+.+++.+.|+||+.+++++...
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 81 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-- 81 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC--
Confidence 45689999999999999999999877776 4899988643 2333456788999999999999999999988542
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
..++++||++ |+|.+++..+ +.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++
T Consensus 82 ----~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 82 ----TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred ----CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 3689999998 6999999764 469999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 175 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
........ .......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.........+..
T Consensus 158 ~~~~~~~~-~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-------- 226 (279)
T cd05109 158 LLDIDETE-YHADGGKVPIKWMALESILH--RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK-------- 226 (279)
T ss_pred ecccccce-eecCCCccchhhCCHHHhcc--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC--------
Confidence 65332211 11122334678999999866 578899999999999999998 8999976553332221111
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ......+..+.+||.+||..||++||++.+++.
T Consensus 227 -------------------~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 227 -------------------GERL---PQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred -------------------CCcC---CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1111 112456788999999999999999999999984
No 305
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=4.9e-38 Score=316.69 Aligned_cols=252 Identities=22% Similarity=0.370 Sum_probs=201.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCC-----cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg-----~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.++|++.+.||+|+||.||+|.+...+ ..||+|.+... ........+.+|+.+|+.++|+||+++++++...
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 81 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNEN-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG-- 81 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCc-cCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC--
Confidence 468999999999999999999886544 88999998643 2334456788999999999999999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhC----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcE
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAN----------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKL 165 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~----------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~l 165 (560)
...|+||||+. ++|.+++... ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+
T Consensus 82 ---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~ 158 (277)
T cd05032 82 ---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTV 158 (277)
T ss_pred ---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCE
Confidence 46899999997 6999998653 236788999999999999999999999999999999999999999
Q ss_pred EEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHH
Q 008607 166 KICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMT 244 (560)
Q Consensus 166 KL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~ 244 (560)
||+|||+++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+....+..+.
T Consensus 159 kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~ 235 (277)
T cd05032 159 KIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKD--GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI 235 (277)
T ss_pred EECCcccchhhccCccc-ccCCCCCccccccCHHHHhc--CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh
Confidence 99999999765332211 11133456788999999865 568899999999999999998 999998766544332221
Q ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 245 ~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..... ......+..+.+||.+||+.||++|||+.++++
T Consensus 236 ---------------------------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 236 ---------------------------DGGHL---DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred ---------------------------cCCCC---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 11111 112345788999999999999999999999986
No 306
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=4.7e-38 Score=321.05 Aligned_cols=262 Identities=24% Similarity=0.398 Sum_probs=205.4
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~ 99 (560)
..+.|++.+.||+|+||.||+|.+..+++.||||.+..... ......+.+|+.++..+. |+||+++++.+...
T Consensus 13 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~----- 86 (296)
T cd06618 13 DLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-KEENKRILMDLDVVLKSHDCPYIVKCYGYFITD----- 86 (296)
T ss_pred CcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-hHHHHHHHHHHHHHHhccCCCchHhhheeeecC-----
Confidence 34679999999999999999999999999999999874322 234456777888776665 99999999988543
Q ss_pred ccEEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 100 KDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..+|+||||+++.|.+++.. ...+++..+..++.||+.||+|||+ .||+||||+|+||+++.++.+||+|||++....
T Consensus 87 ~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~ 166 (296)
T cd06618 87 SDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV 166 (296)
T ss_pred CeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence 46899999999888888766 4579999999999999999999997 599999999999999999999999999987643
Q ss_pred CCCCCcccccccccCccccccccccccc--CCCCCccchhhHHHHHHHHhhCCCCCCCCChh-hHHHHHHHhcCCCCHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFF--SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV-HQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~--~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~-~~~~~i~~~~g~p~~~~ 254 (560)
..... ....++..|+|||.+.+.. ..++.++|||||||++|+|++|+.||...... +.+..+.
T Consensus 167 ~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---------- 232 (296)
T cd06618 167 DSKAK----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKIL---------- 232 (296)
T ss_pred CCCcc----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHh----------
Confidence 22211 2335788899999986521 34788999999999999999999999653221 1111110
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.. . ...+ .....++..+.+||.+||..||.+||+++++++||||..+.
T Consensus 233 -------------~~---~-~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 233 -------------QE---E-PPSL-PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred -------------cC---C-CCCC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 00 0 0000 11124678899999999999999999999999999998644
No 307
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=5.1e-38 Score=318.22 Aligned_cols=270 Identities=23% Similarity=0.395 Sum_probs=201.1
Q ss_pred CCceEEEEEEeecCCeEEEEEE----ECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAY----DTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~----d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
..+|++.+.||+|+||.||++. +..++..||||++... .......+.+|+++|+.++||||+++++++....
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-- 78 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG-- 78 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC--
Confidence 4589999999999999999987 4568899999998642 3344567889999999999999999999875432
Q ss_pred CCccEEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...+++||||++ ++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 79 -~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 79 -RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred -CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence 235899999997 5999999764 4689999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...............++..|+|||.+.+ ..++.++|||||||++|||++|..++...... .. ...+......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-~~----~~~~~~~~~~- 229 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTE--SKFSVASDVWSFGVVLYELFTYSDKSCSPPAE-FM----RMMGNDKQGQ- 229 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhcc--CCcChHHHHHHHHHHHHHHhhcCCcCCCcchh-hh----hhcccccccc-
Confidence 5332221111112234456999999876 57889999999999999999998776443211 11 1111100000
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.......+.+...... .....++..+.+||.+||..||++|||+.|+++
T Consensus 230 -----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 230 -----MIVYHLIELLKNNGRL---PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred -----cchHHHHHHHhcCCcC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0000111111111111 123467889999999999999999999999975
No 308
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=3.1e-38 Score=357.75 Aligned_cols=256 Identities=27% Similarity=0.383 Sum_probs=200.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.++||+|+||.||+|++..+|+.||||++..... ......++.+|+.+++.++||||+++++++.. ...
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d-----~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD-----GDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-----CCE
Confidence 579999999999999999999999999999999975332 23345678999999999999999999998843 346
Q ss_pred EEEEEecCCc-cHHHHHHhC-----------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEec
Q 008607 102 IYVVFELMES-DLHQVIKAN-----------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICD 169 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~-----------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~D 169 (560)
.|+||||++| +|.+++... ..++...+..++.||+.||+|||+.||+||||||+|||++.++.+||+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiD 156 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILD 156 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEe
Confidence 8999999985 899888641 2355677889999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCC---------------cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC
Q 008607 170 FGLARVAFNDTPT---------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK 234 (560)
Q Consensus 170 FGla~~~~~~~~~---------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~ 234 (560)
||+++........ .......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.
T Consensus 157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g--~~~S~kSDIWSLGVILyELLTG~~PF~~~ 234 (932)
T PRK13184 157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG--VPASESTDIYALGVILYQMLTLSFPYRRK 234 (932)
T ss_pred cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC--CCCCcHhHHHHHHHHHHHHHHCCCCCCCc
Confidence 9999865211100 001123579999999999876 57899999999999999999999999775
Q ss_pred ChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 235 NVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 235 ~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
+....... .... .+... ..+..+++.+.+++.+||..||++|++..+.|.+
T Consensus 235 ~~~ki~~~--~~i~-------------------------~P~~~-~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~ 285 (932)
T PRK13184 235 KGRKISYR--DVIL-------------------------SPIEV-APYREIPPFLSQIAMKALAVDPAERYSSVQELKQ 285 (932)
T ss_pred chhhhhhh--hhcc-------------------------Chhhc-cccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 43221110 0000 00000 1124678889999999999999999887665543
No 309
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.9e-38 Score=313.92 Aligned_cols=248 Identities=27% Similarity=0.423 Sum_probs=200.5
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.++|++.++||+|+||.||+|.+. .+..||||.+... ......+.+|+.+++.++|+||+++++++.. ...
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 75 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPG---TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSE-----EEP 75 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCC---ccCHHHHHHHHHHHhhCCCCCEeeeeeeeec-----CCc
Confidence 468999999999999999999875 4578999998742 2334678899999999999999999998743 245
Q ss_pred EEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.++||||++ ++|.+++.... .+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.....
T Consensus 76 ~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~ 155 (261)
T cd05034 76 IYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIED 155 (261)
T ss_pred eEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccc
Confidence 899999998 48999997643 689999999999999999999999999999999999999999999999999876533
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+....+..+......
T Consensus 156 ~~~~~--~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (261)
T cd05034 156 DEYTA--REGAKFPIKWTAPEAANY--GRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRM-------- 223 (261)
T ss_pred hhhhh--hhccCCCccccCHHHhcc--CCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--------
Confidence 21110 112234567999999876 578899999999999999998 99999887655544443221110
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
......+..+.++|.+||..||.+||+++++++
T Consensus 224 ----------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 224 ----------------------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred ----------------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 111344778999999999999999999999874
No 310
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2e-38 Score=317.72 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=201.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++|++.+.||+|+||.||+|++..+++.+|||++.... ........+.+|+.+++.++|+||+++++.+... ..
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-----~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED-----NE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeC-----Ce
Confidence 46899999999999999999999999999999886422 2333456788999999999999999999988543 46
Q ss_pred EEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 102 IYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+++||||+.+ +|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.++|+|||++...
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 156 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence 8999999985 89888863 346899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... .....++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.+...... . +
T Consensus 157 ~~~~~~---~~~~~~~~~~~ape~~~~--~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~-~------------- 216 (267)
T cd08229 157 SSKTTA---AHSLVGTPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-S-L------------- 216 (267)
T ss_pred ccCCcc---cccccCCcCccCHHHhcC--CCccchhhHHHHHHHHHHHHhCCCCcccccchHH-H-H-------------
Confidence 332211 234578999999999876 5688899999999999999999999976442110 0 0
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
...+...... .......+..+.+||.+||..||.+|||++++++
T Consensus 217 ----------~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 217 ----------CKKIEQCDYP--PLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred ----------hhhhhcCCCC--CCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 0000000000 0112346788999999999999999999998864
No 311
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-38 Score=321.56 Aligned_cols=251 Identities=21% Similarity=0.350 Sum_probs=200.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCC-----CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~t-----g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
..|++.+.||+|+||.||+|.+..+ +..||||+++... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~--- 80 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE--- 80 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC---
Confidence 4588899999999999999987543 5789999987432 223346688999999999999999999998544
Q ss_pred CCccEEEEEecCC-ccHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~----------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
..+++++||+. ++|.+++... ..+++..++.++.|++.||.|||++||+||||||+|||++
T Consensus 81 --~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~ 158 (283)
T cd05091 81 --QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF 158 (283)
T ss_pred --CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec
Confidence 35899999998 5898888532 2478889999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhH
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~ 239 (560)
.++.+||+|||+++........ .......+++.|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+.
T Consensus 159 ~~~~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~ 235 (283)
T cd05091 159 DKLNVKISDLGLFREVYAADYY-KLMGNSLLPIRWMSPEAIMY--GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 235 (283)
T ss_pred CCCceEecccccccccccchhe-eeccCccCCccccCHHHHhc--CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 9999999999998764322211 11233456788999999865 568899999999999999998 8899987665544
Q ss_pred HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 240 LDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 240 ~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
+..+... ... .....++..+.+|+.+||+.||.+||+++++++
T Consensus 236 ~~~i~~~---------------------------~~~---~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 236 IEMIRNR---------------------------QVL---PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHHHHcC---------------------------CcC---CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 4333221 111 112357788999999999999999999999986
No 312
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=4e-38 Score=314.65 Aligned_cols=252 Identities=29% Similarity=0.501 Sum_probs=201.8
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc---cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF---EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~---~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
||.+.+.||+|+||.||++.+..++..+++|.++... ........+.+|+.+++.++||||+++++.+... .
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLER-----D 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcC-----C
Confidence 6999999999999999999999888877777765322 1223445677899999999999999999987543 3
Q ss_pred cEEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 101 DIYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
..++|+||+.+ +|.+++.. ...+++..++.++.||+.||.|||+.||+|+||||+||+++. +.+||+|||++..
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~ 154 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRL 154 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceee
Confidence 58999999985 88887753 456999999999999999999999999999999999999975 5699999999876
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ......++..|+|||.+.+ ..++.++|+||||+++|+|++|..||.+.+.......+.. .
T Consensus 155 ~~~~~~---~~~~~~~~~~~~~pe~~~~--~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~---~------ 220 (260)
T cd08222 155 LMGSCD---LATTFTGTPYYMSPEALKH--QGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE---G------ 220 (260)
T ss_pred cCCCcc---cccCCCCCcCccCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---C------
Confidence 543222 1234568889999999865 5678899999999999999999999976554332222111 0
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
........++..+.+||.+||..||.+||+++|+++||||
T Consensus 221 ---------------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 221 ---------------------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred ---------------------CCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 0111123567889999999999999999999999999997
No 313
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6e-38 Score=313.60 Aligned_cols=247 Identities=28% Similarity=0.413 Sum_probs=199.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.+.|+++++||+|+||.||+|.+. +++.||+|.+.... .....+.+|+.+++.++|+||+++++++.. ..
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~ 74 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGS---MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ------EP 74 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCC---CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc------CC
Confidence 467999999999999999999864 57789999987422 234578899999999999999999987632 24
Q ss_pred EEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++.....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05067 75 IYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIED 154 (260)
T ss_pred cEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCC
Confidence 799999997 5999988753 3689999999999999999999999999999999999999999999999999976542
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..... .....++..|+|||.+.. ..++.++|||||||++|+|++ |++||.+.+..+....+....
T Consensus 155 ~~~~~--~~~~~~~~~y~~pe~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---------- 220 (260)
T cd05067 155 NEYTA--REGAKFPIKWTAPEAINY--GTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGY---------- 220 (260)
T ss_pred CCccc--ccCCcccccccCHHHhcc--CCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCC----------
Confidence 22111 122345678999999876 568899999999999999999 999998776544433322111
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.. ......+..+.+||.+||..||++|||++++++
T Consensus 221 -----------------~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 221 -----------------RM---PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred -----------------CC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 00 112345788999999999999999999999875
No 314
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=7.9e-38 Score=314.33 Aligned_cols=253 Identities=26% Similarity=0.429 Sum_probs=201.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCc---EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~---~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.+.|++.+.||+|+||.||+|.+..+++ .||||.+.... .......+.+|+.+++.++||||+++++.+...
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---- 77 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKS---- 77 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCC----
Confidence 3569999999999999999999887765 59999987532 334456789999999999999999999988433
Q ss_pred CccEEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+++||||+++ +|.+++... +.+++..++.++.|++.||.|||++|++|+||||+|||++.++.+||+|||++...
T Consensus 78 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 78 -RPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred -CceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 458999999985 899888764 46899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCccccccc--ccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 177 FNDTPTAIFWTDY--VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 177 ~~~~~~~~~~~~~--~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
............. ..+..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.+..+....+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~------- 227 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQD------- 227 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhcc--CcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-------
Confidence 4322211111111 12457999999876 578899999999999999886 99999876654433332211
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
...+ ....++..+.+|+.+||..||.+||++++++.
T Consensus 228 --------------------~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 228 --------------------YRLP---PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred --------------------CcCC---CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0111 12356788999999999999999999999985
No 315
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.1e-38 Score=335.88 Aligned_cols=253 Identities=26% Similarity=0.401 Sum_probs=197.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCC-----CcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~t-----g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~ 95 (560)
.++|++.++||+|+||.||+|.+... +..||||++... ........+.+|+++|+.+. ||||+++++++...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~-~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~- 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT-ARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS- 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC-CChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC-
Confidence 46789999999999999999987433 457999998643 23344567899999999996 99999999998443
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHhC------------------------------------------------------
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKAN------------------------------------------------------ 120 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~~------------------------------------------------------ 120 (560)
..+|||||||. |+|.+++..+
T Consensus 114 ----~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
T cd05105 114 ----GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYV 189 (400)
T ss_pred ----CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccc
Confidence 46899999998 5898887542
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCee
Q 008607 121 ------------------------------------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNIL 158 (560)
Q Consensus 121 ------------------------------------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NIL 158 (560)
..+++..+..++.||+.||+|||+.+|+||||||+|||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nil 269 (400)
T cd05105 190 PMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVL 269 (400)
T ss_pred hhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEE
Confidence 23778889999999999999999999999999999999
Q ss_pred eCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChh
Q 008607 159 ANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVV 237 (560)
Q Consensus 159 l~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~ 237 (560)
++.++.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....
T Consensus 270 l~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~ 346 (400)
T cd05105 270 LAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFD--NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD 346 (400)
T ss_pred EeCCCEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCcccchh
Confidence 999999999999999865332211 11123456788999999876 578999999999999999997 99999765432
Q ss_pred hHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 238 HQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 238 ~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..+... +...... .....++..+.+||.+||+.||++|||+.++.+
T Consensus 347 ~~~~~~--------------------------~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 347 STFYNK--------------------------IKSGYRM---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHH--------------------------HhcCCCC---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 211110 0000000 112356788999999999999999999999865
No 316
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=8.2e-38 Score=318.50 Aligned_cols=250 Identities=24% Similarity=0.356 Sum_probs=199.4
Q ss_pred CceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
..|.+.+.||+|+||.||+|.+. .++..+++|.+.. ........+.+|+.+++.++|+||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVKFYGVCGDG--- 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccC---
Confidence 46999999999999999999754 3456789998864 2233446688999999999999999999988443
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
...++||||++ ++|.+++..+. .+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 80 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~ 157 (291)
T cd05094 80 --DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG 157 (291)
T ss_pred --CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc
Confidence 45899999997 59999997542 388999999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhH
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~ 239 (560)
.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||...+..+.
T Consensus 158 ~~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~ 234 (291)
T cd05094 158 ANLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMY--RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV 234 (291)
T ss_pred cCCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 999999999999976433221 111234567888999999876 578899999999999999998 9999977654433
Q ss_pred HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 240 LDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 240 ~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
++.+.. .. ........+..+.+||.+||+.||++|||+.++++
T Consensus 235 ~~~~~~---------------------------~~---~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 235 IECITQ---------------------------GR---VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHhC---------------------------CC---CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 322211 00 01112345788999999999999999999999975
No 317
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.2e-38 Score=319.52 Aligned_cols=258 Identities=22% Similarity=0.374 Sum_probs=198.8
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCC--------------cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTG--------------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIK 88 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg--------------~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~ 88 (560)
++|++.+.||+|+||.||+|++..++ ..||+|+++... .......+.+|+++|+.++|+||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 58999999999999999999875432 358999987432 233445788999999999999999999
Q ss_pred eeecCCCcCCCccEEEEEecCC-ccHHHHHHhCC------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCC
Q 008607 89 HILLPPSRREFKDIYVVFELME-SDLHQVIKAND------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPK 155 (560)
Q Consensus 89 ~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~ 155 (560)
+.+... ..+|+||||+. ++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+
T Consensus 84 ~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 158 (295)
T cd05097 84 GVCVSD-----DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATR 158 (295)
T ss_pred EEEcCC-----CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChh
Confidence 988543 45899999998 48999886532 3688899999999999999999999999999999
Q ss_pred CeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh--CCCCCCC
Q 008607 156 NILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLFPG 233 (560)
Q Consensus 156 NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt--G~~pF~~ 233 (560)
|||++.++.+||+|||++......... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||..
T Consensus 159 Nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwSlG~~l~el~~~~~~~p~~~ 235 (295)
T cd05097 159 NCLVGNHYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMAWESILL--GKFTTASDVWAFGVTLWEMFTLCKEQPYSL 235 (295)
T ss_pred hEEEcCCCcEEecccccccccccCcce-eccCcCcCceeecChhhhcc--CCcCchhhHHHHHHHHHHHHHcCCCCCCcc
Confidence 999999999999999999764322211 11122345678999999876 568999999999999999988 6678877
Q ss_pred CChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 234 KNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 234 ~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.+....+..+... +..... ..+....+..++.+.+||.+||+.||.+||+++++++
T Consensus 236 ~~~~~~~~~~~~~--------------------~~~~~~---~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 236 LSDEQVIENTGEF--------------------FRNQGR---QIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred cChHHHHHHHHHh--------------------hhhccc---cccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 6654433322211 111000 0111123346789999999999999999999999975
No 318
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=9e-38 Score=311.60 Aligned_cols=243 Identities=23% Similarity=0.395 Sum_probs=197.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
..+|++.+.||+|+||.||++.. .|..||+|.+... .....+.+|+.+++.++|+|++++++++... ...
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~----~~~ 74 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEE----KGG 74 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCC----chHHHHHHHHHHHHhCCCCCeeeEEEEEEcC----CCc
Confidence 35799999999999999999965 4888999988632 2345688999999999999999999876432 235
Q ss_pred EEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 154 (256)
T cd05082 75 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 154 (256)
T ss_pred eEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccc
Confidence 899999998 59999997654 488999999999999999999999999999999999999999999999999875432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.. ....++..|+|||++.+ ..++.++|||||||++|+|++ |+.||...+..+....+..
T Consensus 155 ~~------~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~------------ 214 (256)
T cd05082 155 TQ------DTGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEK------------ 214 (256)
T ss_pred cC------CCCccceeecCHHHHcc--CCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc------------
Confidence 22 22344567999999876 578899999999999999997 9999976554332222111
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ....+.+++.+.+||.+||..||++|||+.++++
T Consensus 215 ---------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 215 ---------------GYK---MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred ---------------CCC---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 100 1122467889999999999999999999999975
No 319
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=6.5e-38 Score=317.54 Aligned_cols=267 Identities=25% Similarity=0.335 Sum_probs=198.7
Q ss_pred Cce-EEEEEEeecCCeEEEEEE----ECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRY-KIEEVIGKGSYGVVCSAY----DTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y-~i~~~IG~G~~G~Vy~a~----d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
+|| ++++.||+|+||+||++. ...++..||+|.+.... .......+.+|+.+|+.++||||+++++.+...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 456 999999999999998764 34578899999987432 223456778999999999999999999987432
Q ss_pred CCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 98 EFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 98 ~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
....+|+||||+.+ +|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~~~~~-~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 79 GGKGLQLIMEYVPLGSLRDYLPKH-KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred CCceEEEEecCCCCCCHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 22468999999984 898888764 5999999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHh-cCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL-LGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~-~g~p~~~~~ 255 (560)
..............++..|+|||.+.+ ..++.++|||||||++|+|++|..||...... +..+... .+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~--- 230 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKE--NKFSYASDVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTV--- 230 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcc--cCCCcccccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccch---
Confidence 432221111123345677999999876 56889999999999999999999998653311 1111110 000000
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
......+. .... ......++..+.+|+.+||+.||++|||++++++
T Consensus 231 -----~~~~~~~~---~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 231 -----VRLIELLE---RGMR---LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred -----hhhhhhhh---cCCC---CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 00001111 1111 1122456789999999999999999999999985
No 320
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.2e-37 Score=311.80 Aligned_cols=247 Identities=28% Similarity=0.393 Sum_probs=197.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
..+|++.+.||+|+||.||+|.+..+ ..+|+|.+... ......+.+|+.+++.++|+|++++++++.. ..
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~ 74 (260)
T cd05069 5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPG---TMMPEAFLQEAQIMKKLRHDKLVPLYAVVSE------EP 74 (260)
T ss_pred hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccC---CccHHHHHHHHHHHHhCCCCCeeeEEEEEcC------CC
Confidence 46799999999999999999987655 46999987632 1234567889999999999999999887632 24
Q ss_pred EEEEEecCCc-cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELMES-DLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.|+||||+.+ +|.+++.... .+++..+..++.||+.||.|||+.||+|+||||+|||+++++.+||+|||+++....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~ 154 (260)
T cd05069 75 IYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIED 154 (260)
T ss_pred cEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccC
Confidence 7999999985 9999997643 489999999999999999999999999999999999999999999999999976533
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+....+....+...
T Consensus 155 ~~~~~--~~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~----------- 219 (260)
T cd05069 155 NEYTA--RQGAKFPIKWTAPEAALY--GRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG----------- 219 (260)
T ss_pred Ccccc--cCCCccchhhCCHHHhcc--CCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-----------
Confidence 22111 122345678999998876 568899999999999999999 89999876654433322210
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......+..+.+||++||..||.+||+++++++
T Consensus 220 ----------------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 220 ----------------YRM---PCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred ----------------CCC---CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 001 112356788999999999999999999999975
No 321
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-39 Score=341.79 Aligned_cols=243 Identities=31% Similarity=0.509 Sum_probs=200.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~ 100 (560)
...|++...+|.|+|++|-.+.+..++...++|++.+. .....+|+.++... .|+||+++++++ .+..
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~------~~~~~~e~~~~~~~~~h~niv~~~~v~-----~~~~ 389 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR------ADDNQDEIPISLLVRDHPNIVKSHDVY-----EDGK 389 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccc------ccccccccchhhhhcCCCcceeeccee-----cCCc
Confidence 45688888899999999999999999999999999754 11223577665544 699999999998 4456
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeee-CCCCcEEEecccccccccC
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA-NADCKLKICDFGLARVAFN 178 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl-~~~~~lKL~DFGla~~~~~ 178 (560)
++|+|||++.| .|.+.|.....+. ..+..|+.||+.|+.|||++||+||||||+|||+ +..+.|+|||||.++....
T Consensus 390 ~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~ 468 (612)
T KOG0603|consen 390 EIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELER 468 (612)
T ss_pred eeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCch
Confidence 89999999996 6777776665555 7888899999999999999999999999999999 6889999999999987644
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
+ +.+-|-|..|.|||++.. ..|+.++||||||++||+||+|+.||...... ++++.. ++.+
T Consensus 469 ~------~~tp~~t~~y~APEvl~~--~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei~~~-i~~~-------- 529 (612)
T KOG0603|consen 469 S------CDTPALTLQYVAPEVLAI--QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEIHTR-IQMP-------- 529 (612)
T ss_pred h------hcccchhhcccChhhhcc--CCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHHHHh-hcCC--------
Confidence 3 234578899999999986 78999999999999999999999999765443 111111 1111
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
+++ ..+|..+++||+.||++||.+|+++.+++.||||
T Consensus 530 ------------------~~s---~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 530 ------------------KFS---ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ------------------ccc---cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 111 4679999999999999999999999999999999
No 322
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.3e-38 Score=318.43 Aligned_cols=263 Identities=22% Similarity=0.391 Sum_probs=205.4
Q ss_pred ceEEEEEEeecCCeEEEEEEEC---CCCcEEEEEEecCcc--cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIF--EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~---~tg~~vAiK~i~~~~--~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~ 97 (560)
.|++.+.||+|+||.||++.+. .+++.||||.+.+.. ........+.+|+.++..+ +|+||+.+++++...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~--- 77 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTD--- 77 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecC---
Confidence 4899999999999999999864 467899999986421 1223345678999999999 599999999887433
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+|+||||+. ++|.+++.....+++..++.++.|++.||.|||+.|++||||||.||+++.++.++|+|||+++..
T Consensus 78 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 78 --TKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred --CEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 46899999998 499999988778999999999999999999999999999999999999999999999999998764
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
...... ......|+..|+|||.+.+.....+.++|||||||++|+|++|..||...+.......+.+
T Consensus 156 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~----------- 222 (288)
T cd05583 156 LAEEEE--RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISR----------- 222 (288)
T ss_pred cccccc--ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHH-----------
Confidence 332211 1123468899999999865322367899999999999999999999965432211111110
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC---HHHHhcCccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT---AEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt---a~elL~hp~f~~~~ 320 (560)
..... . ......+++.+.+||.+||+.||++||| +.++|+||||+.+.
T Consensus 223 --------~~~~~---~-----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 223 --------RILKS---K-----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred --------HHHcc---C-----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 00100 0 1112346788999999999999999998 57789999998764
No 323
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.1e-37 Score=310.60 Aligned_cols=244 Identities=25% Similarity=0.438 Sum_probs=199.9
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
..+.|++.+.||.|+||.||+|.+ .|+.||+|++..... ...++.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 73 (256)
T cd05039 4 NSKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQG-----N 73 (256)
T ss_pred ChhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcCC-----C
Confidence 356799999999999999999976 488999999975322 467788999999999999999999988542 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..|+||||++ ++|.+++.... .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~ 153 (256)
T cd05039 74 PLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEAS 153 (256)
T ss_pred CeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccc
Confidence 5899999998 59999998765 69999999999999999999999999999999999999999999999999997652
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
... .....+..|+|||.+.. ..++.++|||||||++|+|++ |..||...+..+....+..
T Consensus 154 ~~~------~~~~~~~~~~ape~~~~--~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~----------- 214 (256)
T cd05039 154 QGQ------DSGKLPVKWTAPEALRE--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK----------- 214 (256)
T ss_pred ccc------ccCCCcccccCchhhcC--CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc-----------
Confidence 221 12334567999999865 568889999999999999997 9999976654332221111
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... .......++.+.+||.+||..+|.+|||++|+++
T Consensus 215 ----------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 215 ----------------GYR---MEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred ----------------CCC---CCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000 0112346788999999999999999999999985
No 324
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=7.5e-38 Score=317.02 Aligned_cols=251 Identities=23% Similarity=0.366 Sum_probs=200.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.++|.+.++||+|+||.||++... .++..+|+|.+... .......+.+|+++++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-- 79 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTEG-- 79 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC--
Confidence 357899999999999999999743 35678999988642 334456788999999999999999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND---------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~---------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
...++||||+. ++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++
T Consensus 80 ---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 ---RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG 156 (280)
T ss_pred ---CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc
Confidence 35899999998 58999987643 488999999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhH
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQ 239 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~ 239 (560)
+++.+||+|||+++........ .......+++.|+|||.+.+ ..++.++|||||||++|+|++ |.+||......+.
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 233 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTDYY-RVGGRTMLPIRWMPPESILY--RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEA 233 (280)
T ss_pred CCCCEEECCCCceeEcCCCcee-ecCCCccccccccCHHHhcc--CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHH
Confidence 9999999999999754322211 11123345678999999876 578999999999999999998 9999977655443
Q ss_pred HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 240 LDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 240 ~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
+..+.. .... .....+++.+.+||.+||+.||.+||+++|+++
T Consensus 234 ~~~~~~---------------------------~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 234 IECITQ---------------------------GREL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHc---------------------------CccC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 332211 0000 112356788999999999999999999999975
No 325
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.4e-37 Score=317.94 Aligned_cols=266 Identities=18% Similarity=0.205 Sum_probs=194.7
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCC---CcEEEEEEecCcccChhHH---------HHHHHHHHHHHhcCCCCccccc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDA---------TRILREIKLLRLLRHPDIVEIK 88 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~t---g~~vAiK~i~~~~~~~~~~---------~~i~rEi~iL~~l~HpnIv~l~ 88 (560)
.+++|++.++||+|+||.||+|.+..+ +..+|+|+........... .....++..+..+.|+||+.++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 457899999999999999999998877 6677777643211111000 1122344455667899999999
Q ss_pred eeecCCCcCCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEe
Q 008607 89 HILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 89 ~i~~~~~~~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
+....... .....+++++++..++.+.+.....+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~ 168 (294)
T PHA02882 90 GCGSFKRC-RMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYII 168 (294)
T ss_pred EeeeEecC-CceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEE
Confidence 86543221 11245788998888888887776667899999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCc----ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHH
Q 008607 169 DFGLARVAFNDTPTA----IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244 (560)
Q Consensus 169 DFGla~~~~~~~~~~----~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~ 244 (560)
|||+|+......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+....+....
T Consensus 169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~--~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~ 246 (294)
T PHA02882 169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG--ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAA 246 (294)
T ss_pred EcCCceeeccCCcccccccccccccCCCccccCHHHhCC--CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHh
Confidence 999998653221110 11123479999999999877 578999999999999999999999998764322211111
Q ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 245 ~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. ..++..+.... ...+..+..+.++++.|+..||++||+.+++++
T Consensus 247 ~------------------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 247 K------------------CDFIKRLHEGK-----IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred H------------------HHHHHHhhhhh-----hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 0 11122211111 123456788999999999999999999999975
No 326
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=8e-38 Score=321.21 Aligned_cols=252 Identities=25% Similarity=0.419 Sum_probs=198.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECC-------CCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTR-------TGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPP 94 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~-------tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~ 94 (560)
++|.+.+.||+|+||.||+|.+.. +...+|+|.+... ........+.+|+.+++.+ +|+||+++++++...
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC-CChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 689999999999999999998643 3357999998743 2233456788999999999 799999999988433
Q ss_pred CcCCCccEEEEEecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 008607 95 SRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NI 157 (560)
..+|+||||+. ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+||
T Consensus 97 -----~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 171 (307)
T cd05098 97 -----GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV 171 (307)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence 46899999998 59999997642 478899999999999999999999999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCCh
Q 008607 158 LANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (560)
Q Consensus 158 Ll~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~ 236 (560)
|++.++.+||+|||+++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+.
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred EEcCCCcEEECCCcccccccccchh-hccccCCCccceeChHHhcc--CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 9999999999999998754322111 01112234568999999876 568899999999999999998 8899977654
Q ss_pred hhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 237 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+....+.. ... ......++..+.+||.+||..+|.+|||+.+++++
T Consensus 249 ~~~~~~~~~---------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~ 295 (307)
T cd05098 249 EELFKLLKE---------------------------GHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED 295 (307)
T ss_pred HHHHHHHHc---------------------------CCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 333222211 101 11223567899999999999999999999999863
No 327
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-39 Score=324.14 Aligned_cols=258 Identities=24% Similarity=0.399 Sum_probs=221.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~ 99 (560)
...|.++.+||+|+||.|.+|..+.|.+.||||++++. .....+.+....|-++|.... -|.+++++..|.+.+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD---- 423 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD---- 423 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh----
Confidence 35688999999999999999999999999999999753 334456666778999998774 678999999886655
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.+|+||||+. |||...|+.-+++.|.++.+++.+|+-||-|||+.|||.||||.+|||++.+|.+||+|||+++....
T Consensus 424 -RLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 424 -RLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred -heeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 4999999998 59999999999999999999999999999999999999999999999999999999999999975322
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
+.. ...++|||+.|+|||++.- .+|+.++|.||+||+|||||.|++||.|.+..+.+..|.+...
T Consensus 503 ~~~---TTkTFCGTPdYiAPEIi~Y--qPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnv---------- 567 (683)
T KOG0696|consen 503 DGV---TTKTFCGTPDYIAPEIIAY--QPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNV---------- 567 (683)
T ss_pred CCc---ceeeecCCCcccccceEEe--cccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccC----------
Confidence 222 2357899999999999864 7999999999999999999999999999999888887765211
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGLA 320 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~~ 320 (560)
.....+|.++.++++.+|.+.|.+|.. -.+|-.||||+.+.
T Consensus 568 ---------------------syPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD 613 (683)
T KOG0696|consen 568 ---------------------SYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID 613 (683)
T ss_pred ---------------------cCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence 122357889999999999999999964 45788999998653
No 328
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=9.4e-38 Score=309.28 Aligned_cols=245 Identities=29% Similarity=0.494 Sum_probs=202.6
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
||.|+||.||++.+..+++.+|+|.+.... ........+.+|+.+++.++|+||+++++.+.. ...+|+||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQT-----EEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeec-----CCeeEEEEecC
Confidence 699999999999999999999999987532 222345678899999999999999999988743 34689999999
Q ss_pred C-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccc
Q 008607 110 E-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTD 188 (560)
Q Consensus 110 ~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~ 188 (560)
. ++|.+++.....+++..++.++.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++........ ....
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~---~~~~ 152 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS---RTNT 152 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC---cccC
Confidence 5 69999998887899999999999999999999999999999999999999999999999999976543321 1244
Q ss_pred cccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHH
Q 008607 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLS 268 (560)
Q Consensus 189 ~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~ 268 (560)
..++..|++||.+.+ ..++.++|+|||||++|+|++|..||...+.......+..
T Consensus 153 ~~~~~~~~~Pe~~~~--~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~----------------------- 207 (250)
T cd05123 153 FCGTPEYLAPEVLLG--KGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK----------------------- 207 (250)
T ss_pred CcCCccccChHHhCC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-----------------------
Confidence 578889999999876 4578899999999999999999999977654222221111
Q ss_pred hhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH---HHHhcCccc
Q 008607 269 SMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA---EEALADPYF 316 (560)
Q Consensus 269 ~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta---~elL~hp~f 316 (560)
... ......+..+.+||++||..||++||++ +++++||||
T Consensus 208 -----~~~---~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 208 -----DPL---RFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred -----CCC---CCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 000 1112347889999999999999999999 999999998
No 329
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.3e-37 Score=310.04 Aligned_cols=246 Identities=23% Similarity=0.363 Sum_probs=197.7
Q ss_pred EEEeecCCeEEEEEEECC-CCc--EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTR-TGE--KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~-tg~--~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
++||+|++|+||+|.+.. +++ .||||.+...... .....+.+|+.+++.++|+||+++++++.. ..+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~v 73 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVLT------HPLMMV 73 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEcC------CeEEEE
Confidence 468999999999999865 333 6999999764333 456788999999999999999999998854 468999
Q ss_pred EecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 106 FELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
|||++ ++|.+++..+. .+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.........
T Consensus 74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99997 69999998764 6899999999999999999999999999999999999999999999999999876432221
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
........++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||.+.+..+.+..+...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~--------------- 216 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRT--RTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKE--------------- 216 (257)
T ss_pred eecccCCCCCceecCHHHhcc--cCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc---------------
Confidence 111123456788999999876 578899999999999999998 99999876655443332210
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ......+..+.+|+.+||..+|++||++.++++
T Consensus 217 -----------~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 217 -----------GERL---ERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred -----------CCcC---CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 0000 011245788999999999999999999999975
No 330
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=1.5e-37 Score=314.90 Aligned_cols=250 Identities=22% Similarity=0.361 Sum_probs=197.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCc----EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~----~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.+|++.+.||+|+||+||+|.+..++. .+++|.+... ........+..|+.+++.+.||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~----- 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG----- 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-----
Confidence 578999999999999999999887776 4777776532 122334567788999999999999999998632
Q ss_pred CccEEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
...++|+||+. |+|.+++... +.+++..+..|+.||+.||.|||+.||+||||||+|||++.++.+||+|||+++..
T Consensus 81 -~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 81 -ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred -CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 24689999998 6999999764 46899999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
..... ........++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+.......+.+..
T Consensus 160 ~~~~~-~~~~~~~~~~~~y~~pE~~~~--~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~---------- 226 (279)
T cd05111 160 YPDDK-KYFYSEHKTPIKWMALESILF--GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK---------- 226 (279)
T ss_pred cCCCc-ccccCCCCCcccccCHHHhcc--CCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC----------
Confidence 33221 112234456778999999876 578999999999999999998 9999987664332222211
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..... ....++..+.+++.+||..||.+|||+.|+++
T Consensus 227 -----------------~~~~~---~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 227 -----------------GERLA---QPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred -----------------CCcCC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 11111 11234667899999999999999999999975
No 331
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.2e-38 Score=317.16 Aligned_cols=271 Identities=24% Similarity=0.378 Sum_probs=203.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEE----CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYD----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d----~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
..-|++++.||+|+||.||+|.. ..++..||+|.+.... .......+.+|+.+|+.++|+||+++++++....
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 79 (284)
T cd05079 3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTEDG-- 79 (284)
T ss_pred hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCC--
Confidence 44589999999999999999973 5678899999986432 2334567889999999999999999999875432
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...+++||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 80 -~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 80 -GNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred -CCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccc
Confidence 245899999997 58999987653 589999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...............++..|+|||.+.+ ..++.++|||||||++|+|+++..|+.... ....+..+....+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~ellt~~~~~~~~~-----~~~~~~~~~~~~~~~ 231 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQ--SKFYIASDVWSFGVTLYELLTYCDSESSPM-----TLFLKMIGPTHGQMT 231 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhcc--CCCCccccchhhhhhhhhhhcCCCCCcccc-----chhhhhccccccccc
Confidence 5432221112234556778999999876 578899999999999999999886653321 111122221111100
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
....+..+...... .....++..+.+||.+||+.||.+|||+++++++
T Consensus 232 -------~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 232 -------VTRLVRVLEEGKRL---PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred -------HHHHHHHHHcCccC---CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 00111111111111 1234678899999999999999999999999863
No 332
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=337.04 Aligned_cols=259 Identities=25% Similarity=0.323 Sum_probs=207.6
Q ss_pred cccCCC-CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 008607 17 TEYGEG-SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (560)
Q Consensus 17 ~~~~~~-~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~ 95 (560)
.+|.+. +...+.+.||+|+||+||+|++ --.||||+++...-+....+.|.+|+.+|++-+|.||+-+.+++..+.
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~w---hGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRW---HGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccc---ccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 344443 6678999999999999999964 347999999877777778899999999999999999999999886543
Q ss_pred cCCCccEEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 96 RREFKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
+.||+.+|+| +|+.++.-. ..|.......|++||++|+.|||.++|||||||..||++.++++|||+||||+
T Consensus 462 ------~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLa 535 (678)
T KOG0193|consen 462 ------LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLA 535 (678)
T ss_pred ------eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccce
Confidence 4899999998 899988654 36889999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCccccccccccc-ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHH-HhcCCCC
Q 008607 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGS-FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT-DLLGTPS 251 (560)
Q Consensus 174 ~~~~~~~~~~~~~~~~~gT~~Y~APEll~~-~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~-~~~g~p~ 251 (560)
.+.... ..........|...|||||++.. ...+|++.+|||||||++|||++|..||.. +..+|+-.+. ...+.|
T Consensus 536 tvk~~w-~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIifmVGrG~l~p- 612 (678)
T KOG0193|consen 536 TVKTRW-SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQIIFMVGRGYLMP- 612 (678)
T ss_pred eeeeee-ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheEEEecccccCc-
Confidence 864322 11112233467888999999842 235799999999999999999999999994 4344432111 111111
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.......+++.++++|+..||.+++++||.+.+||.
T Consensus 613 -------------------------d~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 613 -------------------------DLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred -------------------------cchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 122333566779999999999999999999999986
No 333
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.6e-37 Score=310.78 Aligned_cols=243 Identities=22% Similarity=0.343 Sum_probs=192.0
Q ss_pred EeecCCeEEEEEEEC--CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 008607 31 IGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~--~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~ 108 (560)
||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+|+.++|+||+++++++.. ...++||||
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~------~~~~lv~e~ 75 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA------EALMLVMEM 75 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC------CCeEEEEEe
Confidence 899999999999765 456679999986532 23344678899999999999999999998732 257999999
Q ss_pred CC-ccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 109 ME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 109 ~~-gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
++ ++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.............
T Consensus 76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05115 76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKAR 155 (257)
T ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceecc
Confidence 98 589998875 4469999999999999999999999999999999999999999999999999997543332211111
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+....+....+..
T Consensus 156 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-------------------- 213 (257)
T cd05115 156 SAGKWPLKWYAPECINF--RKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ-------------------- 213 (257)
T ss_pred CCCCCCcccCCHHHHcc--CCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHC--------------------
Confidence 22233568999999875 568889999999999999996 9999987665443322211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ...+..++.+.+||.+||..||++||++.++++
T Consensus 214 -------~~~~---~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 214 -------GKRL---DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred -------CCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1111 122456889999999999999999999999865
No 334
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.1e-37 Score=317.78 Aligned_cols=253 Identities=26% Similarity=0.408 Sum_probs=199.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEE-----CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d-----~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~ 95 (560)
.++|++.+.||+|+||.||++.+ ..++..||+|+++... .......+.+|+.+++.+ +|+||+++++.+...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA-HSSEREALMSELKIMSHLGNHENIVNLLGACTIG- 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC-ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC-
Confidence 45899999999999999999975 3356689999887432 233456788999999999 799999999988443
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccc
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL 172 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGl 172 (560)
..+|+||||+. ++|.+++.... .+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+||+|||+
T Consensus 112 ----~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 ----GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred ----CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 35899999998 69999997643 389999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCC
Q 008607 173 ARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPS 251 (560)
Q Consensus 173 a~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~ 251 (560)
++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+......+..+..
T Consensus 188 ~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~------ 258 (302)
T cd05055 188 ARDIMNDSNY-VVKGNARLPVKWMAPESIFN--CVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK------ 258 (302)
T ss_pred cccccCCCce-eecCCCCcccccCCHhhhcc--CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH------
Confidence 9765332211 11122346788999999876 568899999999999999998 9999987654332211110
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. .... ......++.+.+||.+||..||++|||+.|+++
T Consensus 259 -----------------~---~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 259 -----------------E---GYRM---AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred -----------------c---CCcC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 0 0000 112345788999999999999999999999985
No 335
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=367.98 Aligned_cols=262 Identities=29% Similarity=0.413 Sum_probs=215.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
-++.-...||.|.||.||.|.+..||+..|+|.|............+.+|+++|..|.|||+|+++++=++.. .+
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-----kv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-----KV 1309 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-----HH
Confidence 3677778899999999999999999999999998743333445567889999999999999999999876543 48
Q ss_pred EEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC-
Q 008607 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT- 180 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~- 180 (560)
||.||||+ |+|.+++...+..+|-..+.+..|++.||.|||+.||+||||||.|||++.+|.+|++|||.|....+..
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 99999998 5899999887778888889999999999999999999999999999999999999999999998765543
Q ss_pred CCcccccccccCccccccccccccc-CCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~-~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
.-......++||+-|||||++.+.. .+..-+.|||||||++.||+||+.||...+..-++ |.++
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aI--My~V------------- 1454 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAI--MYHV------------- 1454 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHH--HhHH-------------
Confidence 2222345789999999999996642 34567899999999999999999999765543332 2221
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
.+..+.++| ..++++..|||++||.-||+.|.++.|||+|-|-+.
T Consensus 1455 ---------~~gh~Pq~P-----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1455 ---------AAGHKPQIP-----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred ---------hccCCCCCc-----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 122222222 247899999999999999999999999999998653
No 336
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-37 Score=319.20 Aligned_cols=251 Identities=25% Similarity=0.430 Sum_probs=198.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECC-------CCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTR-------TGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPP 94 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~-------tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~ 94 (560)
.+|.+.+.||+|+||.||+|.+.. ....+|+|.+.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 589999999999999999998642 34579999887432 234456788999999999 599999999988433
Q ss_pred CcCCCccEEEEEecCC-ccHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 008607 95 SRREFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~-gdL~~~i~~~----------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NI 157 (560)
..+|+||||+. ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni 165 (314)
T cd05099 91 -----GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV 165 (314)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence 35899999998 5999999753 2488899999999999999999999999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCCh
Q 008607 158 LANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (560)
Q Consensus 158 Ll~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~ 236 (560)
|++.++.+||+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.+.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAPEALFD--RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEcCCCcEEEcccccccccccccccc-ccccCCCCccccCHHHHcc--CCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999997653222111 0112234467999999876 578899999999999999999 8899987665
Q ss_pred hhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 237 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.+.+..+.. ... ......++..+.+||.+||..||++|||+.|+++
T Consensus 243 ~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 243 EELFKLLRE---------------------------GHR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHHHc---------------------------CCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 444332221 000 0112456778999999999999999999999985
No 337
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-37 Score=317.99 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=200.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC-------CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT-------RTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLP 93 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~-------~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~ 93 (560)
..+|.+.+.||+|+||.||+|++. ..+..||+|.+.... .......+.+|+.+++.+ +||||+++++.+..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 568999999999999999999753 234579999886432 234456788999999999 79999999998843
Q ss_pred CCcCCCccEEEEEecCC-ccHHHHHHhC----------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCC
Q 008607 94 PSRREFKDIYVVFELME-SDLHQVIKAN----------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKN 156 (560)
Q Consensus 94 ~~~~~~~~i~lV~E~~~-gdL~~~i~~~----------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~N 156 (560)
. ..+|+||||+. ++|.+++... ..++...+..++.||+.||.|||++||+||||||+|
T Consensus 93 ~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N 167 (304)
T cd05101 93 D-----GPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167 (304)
T ss_pred C-----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence 3 46899999998 5999998763 247788899999999999999999999999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCC
Q 008607 157 ILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN 235 (560)
Q Consensus 157 ILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~ 235 (560)
||++.++.+||+|||+++........ .......+++.|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+
T Consensus 168 ili~~~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 244 (304)
T cd05101 168 VLVTENNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 244 (304)
T ss_pred EEEcCCCcEEECCCccceeccccccc-ccccCCCCCceeeCchhhcc--CCCCchhhHHHHHHHHHHHHcCCCCCcccCC
Confidence 99999999999999999765332211 11123345678999999876 578899999999999999998 789998776
Q ss_pred hhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 236 VVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 236 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
..+....+.. ... ......++..+.+||.+||..+|.+|||+.|+++.
T Consensus 245 ~~~~~~~~~~---------------------------~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 245 VEELFKLLKE---------------------------GHR---MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHHHHc---------------------------CCc---CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 5444332211 000 01123567889999999999999999999999863
No 338
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.3e-37 Score=312.76 Aligned_cols=254 Identities=21% Similarity=0.362 Sum_probs=202.2
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECC----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTR----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.+++|++.++||+|+||.||+|.+.. ++..|++|.+... ........+.+|+.+|+.++|+||+++++++....
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~- 81 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH-ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG- 81 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-
Confidence 45789999999999999999999876 3678999988642 34445677889999999999999999999875432
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEE
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAN--------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKI 167 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~--------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL 167 (560)
...+++++|+. ++|.+++... ..+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||
T Consensus 82 ---~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl 158 (280)
T cd05043 82 ---EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKI 158 (280)
T ss_pred ---CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEE
Confidence 35799999998 6999988653 35899999999999999999999999999999999999999999999
Q ss_pred ecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHh
Q 008607 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246 (560)
Q Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~ 246 (560)
+|||+++......... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||...+..+....+..
T Consensus 159 ~d~g~~~~~~~~~~~~-~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~- 234 (280)
T cd05043 159 TDNALSRDLFPMDYHC-LGDNENRPVKWMALESLVN--KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKD- 234 (280)
T ss_pred CCCCCcccccCCceEE-eCCCCCcchhccCHHHHhc--CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHc-
Confidence 9999997654322111 1122345678999999876 578899999999999999998 9999987654332221111
Q ss_pred cCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 247 ~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... .....+++.+.+++.+||..||++|||+.++++
T Consensus 235 --------------------------~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 235 --------------------------GYRL---AQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred --------------------------CCCC---CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0000 112345788999999999999999999999985
No 339
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=7e-38 Score=314.15 Aligned_cols=248 Identities=27% Similarity=0.440 Sum_probs=195.0
Q ss_pred EEEEEEeecCCeEEEEEEEC----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 26 KIEEVIGKGSYGVVCSAYDT----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
++.+.||.|+||.||+|... ..+..|+||.++. .........+.+|+++|+.++||||+++++++... ..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~-----~~ 75 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIEN-----EP 75 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESS-----SS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeeccccccccccccccccccccccc-----cc
Confidence 57899999999999999887 4567899999964 23444578899999999999999999999999732 34
Q ss_pred EEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
+++|+|||. |+|.+++... ..+++..++.|+.||+.||.|||+++|+|+||+++|||++.++.+||+|||++.....
T Consensus 76 ~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~ 155 (259)
T PF07714_consen 76 LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISE 155 (259)
T ss_dssp EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 899999998 6999999987 6799999999999999999999999999999999999999999999999999987632
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... ...........|+|||.+.+ ..++.++||||||+++|||++ |+.||.+.+..+.+..+.+.
T Consensus 156 ~~~~-~~~~~~~~~~~~~aPE~~~~--~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~----------- 221 (259)
T PF07714_consen 156 KSKY-KNDSSQQLPLRYLAPEVLKD--GEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQG----------- 221 (259)
T ss_dssp SSSE-EESTTSESGGGGS-HHHHHH--SEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTT-----------
T ss_pred cccc-cccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccc-----------
Confidence 2211 11233456778999999976 458899999999999999999 78999877655444333211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... .....++..+.+||.+||..||.+|||+.++++
T Consensus 222 ----------------~~~---~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 222 ----------------QRL---PIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp ----------------EET---TSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ----------------ccc---eeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 000 112356888999999999999999999999975
No 340
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.4e-37 Score=325.11 Aligned_cols=255 Identities=26% Similarity=0.428 Sum_probs=197.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEE-----CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYD-----TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPS 95 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d-----~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~ 95 (560)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++... .......+.+|+.+|..+ +|+||+++++.+...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~- 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC-
Confidence 35899999999999999999984 3567899999997432 223456788999999999 689999999987433
Q ss_pred cCCCccEEEEEecCC-ccHHHHHHhCC-----------------------------------------------------
Q 008607 96 RREFKDIYVVFELME-SDLHQVIKAND----------------------------------------------------- 121 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~-gdL~~~i~~~~----------------------------------------------------- 121 (560)
...+++|||||+ |+|.+++....
T Consensus 84 ---~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (343)
T cd05103 84 ---GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSD 160 (343)
T ss_pred ---CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCcccc
Confidence 235899999998 58998886431
Q ss_pred --------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccccc
Q 008607 122 --------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWT 187 (560)
Q Consensus 122 --------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~ 187 (560)
.+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++......... ....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-~~~~ 239 (343)
T cd05103 161 VEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY-VRKG 239 (343)
T ss_pred chhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcch-hhcC
Confidence 3677888999999999999999999999999999999999999999999999764322111 1112
Q ss_pred ccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHH
Q 008607 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRY 266 (560)
Q Consensus 188 ~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~ 266 (560)
...++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+......+...
T Consensus 240 ~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----------------------- 294 (343)
T cd05103 240 DARLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR----------------------- 294 (343)
T ss_pred CCCCCcceECcHHhcC--CCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH-----------------------
Confidence 2345677999999876 578899999999999999997 99999765432211110
Q ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 267 LSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 267 l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
+. ...... .....++.+.+++.+||+.||.+|||+.|+++|
T Consensus 295 ~~---~~~~~~---~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 295 LK---EGTRMR---APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred Hh---ccCCCC---CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 00 000000 112356789999999999999999999999975
No 341
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.9e-37 Score=315.49 Aligned_cols=250 Identities=24% Similarity=0.406 Sum_probs=196.4
Q ss_pred ceEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~-----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
+|++.+.||+|+||.||+|.+.. ....+++|.+.... .......+.+|+.+|+.++||||+++++.+...
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---- 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA-SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQD---- 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC-CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecC----
Confidence 48899999999999999998753 33578888876432 233456788999999999999999999987432
Q ss_pred CccEEEEEecCC-ccHHHHHHhC------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 008607 99 FKDIYVVFELME-SDLHQVIKAN------------------------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~------------------------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK 153 (560)
...|+|+||+. ++|.+++... ..+++..++.++.|++.||.|||++||+|||||
T Consensus 76 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 76 -GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred -CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 45899999998 5899888642 247889999999999999999999999999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCC
Q 008607 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFP 232 (560)
Q Consensus 154 P~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~ 232 (560)
|+|||+++++.+||+|||+++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.
T Consensus 155 p~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~~l~el~t~g~~p~~ 231 (290)
T cd05045 155 ARNVLVAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFD--HIYTTQSDVWSFGVLLWEIVTLGGNPYP 231 (290)
T ss_pred hheEEEcCCCcEEeccccccccccCccch-hcccCCCCCccccCHHHHcc--CCcchHhHHHHHHHHHHHHHhcCCCCCC
Confidence 99999999999999999999764322211 11122345678999998866 578899999999999999998 999998
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 233 GKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 233 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
+.......+.+.. .... .....++..+.+||.+||+.||.+||++.|+++
T Consensus 232 ~~~~~~~~~~~~~---------------------------~~~~---~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 232 GIAPERLFNLLKT---------------------------GYRM---ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CCCHHHHHHHHhC---------------------------CCCC---CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 7664433222111 0000 112356788999999999999999999999975
No 342
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.9e-37 Score=309.48 Aligned_cols=250 Identities=24% Similarity=0.412 Sum_probs=200.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCC---CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~t---g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
.++|.+.+.||+|+||.||+|.+... ...|+||.+.... .......+.+|+.+++.+.|+||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~----- 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE----- 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-----
Confidence 35699999999999999999987654 3468999886432 23455678899999999999999999998743
Q ss_pred CccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 99 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
...|+||||+. ++|.+++.... .+++..++.++.||+.||+|||+.|++||||||+|||++.++.+||+|||+++..
T Consensus 79 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 79 -NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 23689999998 59999998754 5899999999999999999999999999999999999999999999999999765
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...... ..+...++..|+|||.+.. ..++.++|||||||++|+|++ |..||.+.+..+.+..+..
T Consensus 158 ~~~~~~--~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~---------- 223 (270)
T cd05056 158 EDESYY--KASKGKLPIKWMAPESINF--RRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN---------- 223 (270)
T ss_pred ccccce--ecCCCCccccccChhhhcc--CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc----------
Confidence 333211 1122334567999999865 578899999999999999986 9999987765544332211
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ...+.++..+.+||.+||..+|.+|||+.+++.
T Consensus 224 -----------------~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 224 -----------------GERL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred -----------------CCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0111 123466889999999999999999999999875
No 343
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=5.5e-37 Score=306.88 Aligned_cols=247 Identities=26% Similarity=0.401 Sum_probs=198.4
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
..+|++.+.||+|+||.||++.+. .+..+|+|.+... ......+.+|+.+++.++|+||+++++.+.. ..
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~ 74 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG---SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EP 74 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC---hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CC
Confidence 568999999999999999999754 5567999988642 2345678899999999999999999988743 35
Q ss_pred EEEEEecCC-ccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 102 IYVVFELME-SDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.|+||||++ ++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||++.....
T Consensus 75 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 154 (260)
T cd05073 75 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED 154 (260)
T ss_pred eEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccC
Confidence 799999998 5999999763 3578899999999999999999999999999999999999999999999999976432
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
.... ......++..|+|||++.. ..++.++|||||||++|+|++ |+.||.+.+..+....+...
T Consensus 155 ~~~~--~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~----------- 219 (260)
T cd05073 155 NEYT--AREGAKFPIKWTAPEAINF--GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG----------- 219 (260)
T ss_pred CCcc--cccCCcccccccCHhHhcc--CCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-----------
Confidence 2211 1122345677999999876 568889999999999999998 99999876654433322210
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.. .......+..+.+++.+||+.||.+||++.++++
T Consensus 220 ----------------~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 220 ----------------YR---MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred ----------------CC---CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 00 0122456788999999999999999999998864
No 344
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3e-37 Score=320.99 Aligned_cols=252 Identities=26% Similarity=0.426 Sum_probs=198.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCC-------CcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRT-------GEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPP 94 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~t-------g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~ 94 (560)
.+|++.+.||+|+||.||+|++... +..||+|.+... ........+.+|+++++.+ +|+||+++++.+...
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 4799999999999999999986432 236899987642 2233456788999999999 799999999988433
Q ss_pred CcCCCccEEEEEecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 008607 95 SRREFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NI 157 (560)
..+|+|+||+. ++|.+++.... .++...+..++.||+.||.|||++||+||||||+||
T Consensus 91 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni 165 (334)
T cd05100 91 -----GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV 165 (334)
T ss_pred -----CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence 35899999998 59999987532 377888999999999999999999999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCCh
Q 008607 158 LANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (560)
Q Consensus 158 Ll~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~ 236 (560)
|++.++.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYY-KKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EEcCCCcEEECCcccceeccccccc-ccccCCCcCceEcCHHHhcc--CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999765332211 11122334567999999976 578899999999999999998 8899987765
Q ss_pred hhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 237 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+.+..+.. ... .......+..+.+||.+||+.+|.+|||+.|+|++
T Consensus 243 ~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 243 EELFKLLKE---------------------------GHR---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHHHc---------------------------CCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 444333221 000 01123567889999999999999999999999874
No 345
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.7e-37 Score=305.84 Aligned_cols=248 Identities=28% Similarity=0.482 Sum_probs=200.7
Q ss_pred eEEEEEEeecCCeEEEEEEECCCC----cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTG----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg----~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+++.+.||.|+||.||++.+...+ ..||+|++.... .......+.+|+.+|+.+.|+||+++++.+... .
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~ 74 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEE-----E 74 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCC-----C
Confidence 357889999999999999998776 899999986432 222566788999999999999999999988543 4
Q ss_pred cEEEEEecCCc-cHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELMES-DLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~--lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
..|++|||+.+ +|.+++..... +++..++.++.||+.||+|||+.||+|+||||+||+++.++.++|+|||++....
T Consensus 75 ~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 75 PLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 68999999984 99999976554 9999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
....... ....++..|+|||.+.+ ..++.++|||||||++|+|++ |.+||.+.+....+..+..
T Consensus 155 ~~~~~~~--~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~----------- 219 (258)
T smart00219 155 DDDYYKK--KGGKLPIRWMAPESLKD--GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKK----------- 219 (258)
T ss_pred ccccccc--ccCCCcccccChHHhcc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc-----------
Confidence 4321111 12236788999999865 578899999999999999998 8899987654443332221
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ......+..+.+++.+||..||.+|||+.|+++
T Consensus 220 ----------------~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 220 ----------------GYRL---PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred ----------------CCCC---CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 1111 112346888999999999999999999999986
No 346
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.2e-37 Score=306.30 Aligned_cols=249 Identities=26% Similarity=0.430 Sum_probs=198.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
...|++.+.||+|+||.||++.+. .+..+|+|.+.... .....+.+|+++++.+.||||+++++.+... ..
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~ 73 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA---MSEEDFIEEAQVMMKLSHPKLVQLYGVCTER-----SP 73 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC---CCHHHHHHHHHHHHhCCCCCeeeEEEEEccC-----Cc
Confidence 457999999999999999999875 46789999886422 2235678899999999999999999987433 36
Q ss_pred EEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|+||||+.+ +|.+++... +.++++.++.++.|++.||+|||+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 74 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 153 (256)
T cd05112 74 ICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDD 153 (256)
T ss_pred eEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccC
Confidence 8999999984 898888764 46899999999999999999999999999999999999999999999999998765332
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.... .....++..|+|||.+.+ ..++.++|||||||++|+|++ |..||........+..+.+
T Consensus 154 ~~~~--~~~~~~~~~~~aPe~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~------------- 216 (256)
T cd05112 154 QYTS--STGTKFPVKWSSPEVFSF--SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINA------------- 216 (256)
T ss_pred cccc--cCCCccchhhcCHhHhcc--CCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhC-------------
Confidence 2111 112334568999999876 568889999999999999998 9999977664433332211
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
..... .....+..+.+|+.+||+.||++|||+.+++++
T Consensus 217 --------------~~~~~---~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 217 --------------GFRLY---KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred --------------CCCCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 00000 012347889999999999999999999999863
No 347
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=2.7e-37 Score=311.03 Aligned_cols=242 Identities=25% Similarity=0.393 Sum_probs=190.4
Q ss_pred EEEeecCCeEEEEEEECCCCc--EEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCccEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGE--KVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~--~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
+.||+|+||.||+|.+..++. .+++|.+... ........+.+|+.++..+ +||||+++++++... ..+|+|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-----~~~~lv 74 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR-----GYLYLA 74 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc-CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecC-----CCceEE
Confidence 368999999999999988876 4688887632 2233456788999999999 799999999988443 358999
Q ss_pred EecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEe
Q 008607 106 FELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
|||+. ++|.+++.... .++++.++.++.||+.||+|||+.||+||||||+|||++.++.+||+
T Consensus 75 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~ 154 (270)
T cd05047 75 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 154 (270)
T ss_pred EEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEEC
Confidence 99998 59999997543 47899999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhc
Q 008607 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247 (560)
Q Consensus 169 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~ 247 (560)
|||++....... .......+..|+|||++.. ..++.++|||||||++|+|++ |..||.+.+..+....+.
T Consensus 155 dfgl~~~~~~~~----~~~~~~~~~~y~apE~~~~--~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~--- 225 (270)
T cd05047 155 DFGLSRGQEVYV----KKTMGRLPVRWMAIESLNY--SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP--- 225 (270)
T ss_pred CCCCccccchhh----hccCCCCccccCChHHHcc--CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh---
Confidence 999986322111 0111234567999999866 578899999999999999997 999997765433322211
Q ss_pred CCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 248 GTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 248 g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..... ......+..+.+||.+||..||.+|||+++++.
T Consensus 226 ------------------------~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 226 ------------------------QGYRL---EKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred ------------------------CCCCC---CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 10000 112346788999999999999999999999985
No 348
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.5e-37 Score=340.29 Aligned_cols=279 Identities=20% Similarity=0.260 Sum_probs=186.1
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCC----CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRT----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~t----g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
..++|++.+.||+|+||.||+|++..+ +..||||++.... .......| .++...+.++..+...+.....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~----~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG----AVEIWMNE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc----hhHHHHHH--HHHhhchhhHHHHHHhhhcccc
Confidence 457899999999999999999999998 9999999986421 11111111 1222233334433333322211
Q ss_pred -CCCccEEEEEecCC-ccHHHHHHhCCC--------------------CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCC
Q 008607 97 -REFKDIYVVFELME-SDLHQVIKANDD--------------------LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKP 154 (560)
Q Consensus 97 -~~~~~i~lV~E~~~-gdL~~~i~~~~~--------------------lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP 154 (560)
.....++||+||++ ++|.+++..... ..+..++.++.||+.||.|||+.||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 34457899999998 489888865421 12345778999999999999999999999999
Q ss_pred CCeeeCC-CCcEEEecccccccccCCCCCcccccccccCccccccccccccc--------------------CCCCCccc
Q 008607 155 KNILANA-DCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF--------------------SKYTPAID 213 (560)
Q Consensus 155 ~NILl~~-~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~--------------------~~y~~~~D 213 (560)
+|||++. ++.+||+|||+|+....... .....+++|+.|+|||.+.... ..++.++|
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~--~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGIN--YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccc--cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 9999986 57999999999975432221 1224578999999999653210 12445679
Q ss_pred hhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCC---CCCCCCCHHHH
Q 008607 214 IWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFS---QKFPNANPLAL 290 (560)
Q Consensus 214 IWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~s~~~~ 290 (560)
||||||+||||+++..++ .+...++..+....+..... +. ............ ..+......+.
T Consensus 362 VwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~~d~~~~~~~ 427 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVA-WR-----------KLVEPRASPDLRRGFEVLDLDGGAGW 427 (566)
T ss_pred cHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHH-HH-----------HhhccccchhhhhhhhhccccchHHH
Confidence 999999999999966543 34444444443333322111 10 000000000101 11122344567
Q ss_pred HHHHHhcccCCCCCCCHHHHhcCcccccccc
Q 008607 291 RLLERMLAFEPKDRPTAEEALADPYFKGLAK 321 (560)
Q Consensus 291 dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~ 321 (560)
+||.+||++||.+|||+.|+|+||||++...
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999999999999987544
No 349
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=5.7e-37 Score=309.95 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=200.7
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCc----EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~----~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
..+|++.+.||+|+||.||+|.++.+|. .+|+|.+.... .......+.+|+.+++.++|+||+++++++..
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 80 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS---- 80 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 4689999999999999999999877765 58999876432 23445678899999999999999999998854
Q ss_pred CCccEEEEEecCC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...++||||+. ++|.+++..+ ..+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus 81 --~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 81 --SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred --CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 35899999998 5999998774 4699999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
........ ......++..|+|||.+.. ..++.++|||||||++|||++ |+.||.+....+....+..
T Consensus 159 ~~~~~~~~-~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~--------- 226 (279)
T cd05057 159 LDVDEKEY-HAEGGKVPIKWMALESILH--RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK--------- 226 (279)
T ss_pred ccCcccce-ecCCCcccccccCHHHhhc--CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC---------
Confidence 54322111 1111223567999998865 578899999999999999998 9999987664433222211
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ......+..+.++|.+||..||.+|||+.++++
T Consensus 227 ------------------~~~~---~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 227 ------------------GERL---PQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred ------------------CCCC---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 1111 112345678999999999999999999999875
No 350
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.8e-37 Score=313.59 Aligned_cols=259 Identities=22% Similarity=0.374 Sum_probs=197.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECC----------------CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTR----------------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~----------------tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (560)
.++|++.+.||+|+||.||++.+.. ++..||+|++... ........+.+|+.+|+.++|+||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcc
Confidence 3579999999999999999986433 3457999998643 2233456788999999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-ccHHHHHHhCC-----------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 008607 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND-----------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~-----------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK 153 (560)
++++.+... ..+|+||||+. ++|.+++.... .+++..+..++.||+.||+|||+.||+|||||
T Consensus 83 ~~~~~~~~~-----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 83 RLLAVCITS-----DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred eEEEEEecC-----CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 999988543 35899999998 59999987642 36778999999999999999999999999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh--CCCCC
Q 008607 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLF 231 (560)
Q Consensus 154 P~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt--G~~pF 231 (560)
|+|||++.++.+||+|||+++......... ......++..|++||.+.+ ..++.++|||||||++|||++ |..||
T Consensus 158 p~Nili~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~~DiwSlG~~l~el~~~~~~~p~ 234 (296)
T cd05095 158 TRNCLVGKNYTIKIADFGMSRNLYSGDYYR-IQGRAVLPIRWMSWESILL--GKFTTASDVWAFGVTLWEILTLCKEQPY 234 (296)
T ss_pred hheEEEcCCCCEEeccCcccccccCCccee-ccCcCcCccccCCHHHHhc--CCccchhhhhHHHHHHHHHHHhCCCCCc
Confidence 999999999999999999997643322111 1122345678999998765 568899999999999999998 77888
Q ss_pred CCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008607 232 PGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311 (560)
Q Consensus 232 ~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL 311 (560)
...+..+.+.... .++....... .......+++.+.+||.+||+.||.+||++.+++
T Consensus 235 ~~~~~~~~~~~~~--------------------~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~ 291 (296)
T cd05095 235 SQLSDEQVIENTG--------------------EFFRDQGRQV---YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIH 291 (296)
T ss_pred cccChHHHHHHHH--------------------HHHhhccccc---cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 7655433222111 1111110000 1111234678899999999999999999999987
Q ss_pred c
Q 008607 312 A 312 (560)
Q Consensus 312 ~ 312 (560)
+
T Consensus 292 ~ 292 (296)
T cd05095 292 A 292 (296)
T ss_pred H
Confidence 4
No 351
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.7e-37 Score=312.00 Aligned_cols=252 Identities=22% Similarity=0.326 Sum_probs=198.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
.++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++.+.||||+++++++...
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~-- 80 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDHPNIVKLLGVCAVG-- 80 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC--
Confidence 357999999999999999999875 367899999986432 223346688999999999999999999988543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC----------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND----------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~----------------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK 153 (560)
...|+||||+. ++|.+++.... .+++..++.++.||+.||.|||++||+|||||
T Consensus 81 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 81 ---KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred ---CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 35899999998 59999987431 37888999999999999999999999999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCC
Q 008607 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFP 232 (560)
Q Consensus 154 P~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~ 232 (560)
|+|||++.++.+||+|||+++......... .......+..|+|||.+.+ ..++.++|||||||++|+|++ |..||.
T Consensus 158 p~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~~~~~~p~~ 234 (288)
T cd05050 158 TRNCLVGENMVVKIADFGLSRNIYSADYYK-ASENDAIPIRWMPPESIFY--NRYTTESDVWAYGVVLWEIFSYGMQPYY 234 (288)
T ss_pred HhheEecCCCceEECccccceecccCcccc-ccCCCccChhhcCHHHHhc--CCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999987543222111 0122344667999999876 578999999999999999997 888997
Q ss_pred CCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 233 GKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 233 ~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
+.+..+.+..+.. ... .......+..+.+||.+||+.||.+|||++|+++
T Consensus 235 ~~~~~~~~~~~~~---------------------------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 235 GMAHEEVIYYVRD---------------------------GNV---LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCCHHHHHHHHhc---------------------------CCC---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 7654433222211 110 1112356788999999999999999999999874
No 352
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=4.4e-37 Score=305.19 Aligned_cols=244 Identities=25% Similarity=0.411 Sum_probs=193.8
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~ 108 (560)
++||.|+||.||+|.+.. ++.||+|++...... .....+.+|+++++.+.|+||+++++++... ...|+||||
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-----~~~~~v~e~ 73 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQK-----QPIYIVMEL 73 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-----CCeEEEEEc
Confidence 469999999999999887 999999998753322 3456788999999999999999999987443 458999999
Q ss_pred CC-ccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 109 ME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 109 ~~-gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
+. ++|.+++.. ...+++..+..++.|++.||+|||+++|+||||||+|||++.++.+||+|||++.......... ..
T Consensus 74 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~-~~ 152 (251)
T cd05041 74 VPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTV-SD 152 (251)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCccee-cc
Confidence 97 589999866 3468999999999999999999999999999999999999999999999999997643221110 00
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
.....+..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+.........+...
T Consensus 153 ~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~------------------- 211 (251)
T cd05041 153 GLKQIPIKWTAPEALNY--GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG------------------- 211 (251)
T ss_pred ccCcceeccCChHhhcc--CCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-------------------
Confidence 11233567999999866 578899999999999999999 88999776543322222110
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......+..+.+||.+||..+|.+|||++|+|+
T Consensus 212 --------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 212 --------YRM---PAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred --------CCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 000 012345788999999999999999999999986
No 353
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=4e-37 Score=309.40 Aligned_cols=255 Identities=22% Similarity=0.368 Sum_probs=199.7
Q ss_pred eEEEEEEeecCCeEEEEEEEC---CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC-Cc
Q 008607 25 YKIEEVIGKGSYGVVCSAYDT---RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE-FK 100 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~---~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~-~~ 100 (560)
|++.+.||+|+||.||+|.+. .++..||||++............+.+|+++|+.++||||+++++++....... ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 678899999999999999864 46789999999765555556677899999999999999999999886543222 12
Q ss_pred cEEEEEecCC-ccHHHHHHhC------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 101 DIYVVFELME-SDLHQVIKAN------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
..+++++|+. ++|.+++... ..+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~ 160 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS 160 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence 3578999998 6888877432 14789999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCH
Q 008607 174 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSP 252 (560)
Q Consensus 174 ~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~ 252 (560)
+......... ......++..|++||.+.+ ..++.++|||||||++|+|++ |++||.+.+..+....+..
T Consensus 161 ~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~--~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~------- 230 (273)
T cd05074 161 KKIYSGDYYR-QGCASKLPVKWLALESLAD--NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK------- 230 (273)
T ss_pred ccccCCccee-cCCCccCchhhcCHhHHhc--CccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc-------
Confidence 8653322111 1122345677999999876 567889999999999999999 8899987664433222211
Q ss_pred HHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 253 EAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ....+..+..+.+|+.+||+.+|++||++.++++
T Consensus 231 --------------------~~~---~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 231 --------------------GNR---LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred --------------------CCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 000 0111356788999999999999999999999986
No 354
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.7e-37 Score=303.29 Aligned_cols=243 Identities=24% Similarity=0.416 Sum_probs=192.9
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEec
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFEL 108 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~ 108 (560)
++||+|+||.||+|.+. .+..||+|++..... ......+.+|+.+++.++||||+++++++... ...++||||
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~ 73 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLP-QELKIKFLSEARILKQYDHPNIVKLIGVCTQR-----QPIYIVMEL 73 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCC-HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecC-----CccEEEEEC
Confidence 46999999999999864 688999999875432 23345688999999999999999999988443 358999999
Q ss_pred CC-ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccc
Q 008607 109 ME-SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFW 186 (560)
Q Consensus 109 ~~-gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~ 186 (560)
++ ++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.......... .
T Consensus 74 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~ 151 (250)
T cd05085 74 VPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSS--S 151 (250)
T ss_pred CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccccc--C
Confidence 98 5899888754 458999999999999999999999999999999999999999999999999987543222111 0
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
....++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+.+.......+..
T Consensus 152 ~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~-------------------- 209 (250)
T cd05085 152 GLKQIPIKWTAPEALNY--GRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEK-------------------- 209 (250)
T ss_pred CCCCCcccccCHHHhcc--CCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHc--------------------
Confidence 12234567999999876 568889999999999999998 9999987654432222211
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ......++..+.+|+.+||..||++||++.|+++
T Consensus 210 -------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 210 -------GYR---MSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred -------CCC---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 000 1122356789999999999999999999999975
No 355
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=329.62 Aligned_cols=238 Identities=28% Similarity=0.430 Sum_probs=196.7
Q ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
-++-||.|+.|-||+++ -.++.||||+++.. . ..+|+-|++|+|+||+.++++|... ..+||||
T Consensus 128 ELeWlGSGaQGAVF~Gr--l~netVAVKKV~el-------k--ETdIKHLRkLkH~NII~FkGVCtqs-----PcyCIiM 191 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGR--LHNETVAVKKVREL-------K--ETDIKHLRKLKHPNIITFKGVCTQS-----PCYCIIM 191 (904)
T ss_pred hhhhhccCcccceeeee--ccCceehhHHHhhh-------h--hhhHHHHHhccCcceeeEeeeecCC-----ceeEEee
Confidence 35779999999999995 45889999998631 1 2478889999999999999999543 4689999
Q ss_pred ecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccc
Q 008607 107 ELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIF 185 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~ 185 (560)
|||. |-|..+++....++......|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||-++...... +
T Consensus 192 EfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S-T--- 267 (904)
T KOG4721|consen 192 EFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS-T--- 267 (904)
T ss_pred eccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhh-h---
Confidence 9998 7999999999999999999999999999999999999999999999999999999999999987654332 1
Q ss_pred ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 186 ~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
.-.++||..|||||++.. ...+.|+|||||||+|||||||..||.+-+ +..+|..+ |+-+
T Consensus 268 kMSFaGTVaWMAPEvIrn--ePcsEKVDIwSfGVVLWEmLT~EiPYkdVd---ssAIIwGV-GsNs-------------- 327 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRN--EPCSEKVDIWSFGVVLWEMLTGEIPYKDVD---SSAIIWGV-GSNS-------------- 327 (904)
T ss_pred hhhhhhhHhhhCHHHhhc--CCcccccceehhHHHHHHHHhcCCCccccc---hheeEEec-cCCc--------------
Confidence 246899999999999987 689999999999999999999999997533 22222111 1100
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPY 315 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~ 315 (560)
... .....++..++=||+.||.-.|..||++.+||.|-=
T Consensus 328 --------L~L---pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 328 --------LHL---PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred --------ccc---cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 001 122456777899999999999999999999999853
No 356
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=8.3e-37 Score=307.65 Aligned_cols=252 Identities=22% Similarity=0.371 Sum_probs=199.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECC-----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTR-----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~-----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
++|++.+.||+|+||.||+|+++. ..+.|++|.+... ........+.+|+.+|+.++|+||+++++.+...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 80 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT-KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREA--- 80 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc-cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCC---
Confidence 579999999999999999999754 3467999987642 1222456788999999999999999999987432
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC---------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEE
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND---------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKI 167 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~---------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL 167 (560)
...|+||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+||||||+|||++.++.++|
T Consensus 81 --~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l 158 (275)
T cd05046 81 --EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKV 158 (275)
T ss_pred --CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEE
Confidence 45799999998 69999998765 6899999999999999999999999999999999999999999999
Q ss_pred ecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHh
Q 008607 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246 (560)
Q Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~ 246 (560)
+|||++........ .......++..|+|||.+.+ ..++.++|||||||++|+|++ |..||.+......+..+.
T Consensus 159 ~~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~-- 232 (275)
T cd05046 159 SLLSLSKDVYNSEY--YKLRNALIPLRWLAPEAVQE--DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQ-- 232 (275)
T ss_pred cccccccccCcccc--cccCCceeEEeecChhhhcc--CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHH--
Confidence 99999875432221 11233456778999998865 467889999999999999998 788997654332222111
Q ss_pred cCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 247 ~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.. ...+ .....++..+.++|.+||+.||.+|||+.|++.+
T Consensus 233 -------------------------~~-~~~~-~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 233 -------------------------AG-KLEL-PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred -------------------------cC-CcCC-CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 00 0011 1123567889999999999999999999999864
No 357
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-39 Score=330.24 Aligned_cols=259 Identities=22% Similarity=0.379 Sum_probs=224.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
-+..+++..||-|+||.|=++.-......+|+|++++.. -+......+..|-+||..++.|.||++|..| ++.+
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-----rd~k 493 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-----RDSK 493 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh-----ccch
Confidence 356788889999999999988766655569999997532 3444567789999999999999999999988 5667
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++|++||-|- |+|+..+..++.|.+...++++..+++|++|||+.|||+|||||+|+|++.+|-+||.|||+|+....+
T Consensus 494 yvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 8999999986 699999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVR 259 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~ 259 (560)
..+ .++|||+.|.|||++.+ ...+.++|.||||+++||||+|.+||.+.+....++.|.+.+..
T Consensus 574 ~KT----wTFcGTpEYVAPEIILn--KGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~---------- 637 (732)
T KOG0614|consen 574 RKT----WTFCGTPEYVAPEIILN--KGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDK---------- 637 (732)
T ss_pred Cce----eeecCCcccccchhhhc--cCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhh----------
Confidence 544 67899999999999987 67899999999999999999999999999998888888653210
Q ss_pred hHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccccc
Q 008607 260 NEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGLA 320 (560)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~~ 320 (560)
-.....++..+.+||+++...+|.+|.. +.+|-.|.||.++.
T Consensus 638 -------------------i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd 684 (732)
T KOG0614|consen 638 -------------------IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFD 684 (732)
T ss_pred -------------------hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence 0111345677999999999999999975 89999999998754
No 358
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8e-37 Score=304.42 Aligned_cols=240 Identities=26% Similarity=0.456 Sum_probs=195.5
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.|++.+.||+|+||.||++. .+++.||+|++... .....+.+|+.+++.++|+||+++++.+... ..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~----~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~ 73 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCD----VTAQAFLEETAVMTKLHHKNLVRLLGVILHN------GL 73 (254)
T ss_pred HHceeeeeeccCCCCceEecc--cCCCceEEEeecCc----chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC------Cc
Confidence 569999999999999999984 57889999998642 2345788999999999999999999987432 36
Q ss_pred EEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|+||||+. ++|.+++.... .+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||++......
T Consensus 74 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~ 153 (254)
T cd05083 74 YIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG 153 (254)
T ss_pred EEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc
Confidence 99999998 59999997654 5899999999999999999999999999999999999999999999999998754322
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
. .....+..|+|||.+.+ ..++.++|+|||||++|+|++ |+.||.+.+..+....+..
T Consensus 154 ~------~~~~~~~~y~~pe~~~~--~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~------------- 212 (254)
T cd05083 154 V------DNSKLPVKWTAPEALKH--KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK------------- 212 (254)
T ss_pred C------CCCCCCceecCHHHhcc--CCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-------------
Confidence 1 12234567999999865 578889999999999999997 9999987664433222211
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... .....++..+.+||.+||+.+|.+||++++++.
T Consensus 213 --------------~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 213 --------------GYRM---EPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred --------------CCCC---CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0001 112356788999999999999999999999975
No 359
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=7.1e-37 Score=313.78 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=199.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCc----EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~----~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
.++|++.+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.++|+||+++++.+...
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~--- 81 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP--- 81 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC---
Confidence 4578999999999999999999988776 46888876422 223344678999999999999999999988542
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
..++|+||+. |+|.+++.... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 82 ---~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 82 ---TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred ---CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccc
Confidence 3579999998 68999987754 589999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
....... .......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.+....+....+..
T Consensus 159 ~~~~~~~-~~~~~~~~~~~y~~PE~~~~--~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~--------- 226 (303)
T cd05110 159 LEGDEKE-YNADGGKMPIKWMALECIHY--RKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK--------- 226 (303)
T ss_pred ccCcccc-cccCCCccccccCCHHHhcc--CCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC---------
Confidence 5332211 11223456778999999876 578899999999999999997 8999977653332221111
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.... ...+..+..+.++|.+||..||.+||+++++++
T Consensus 227 ------------------~~~~---~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 227 ------------------GERL---PQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred ------------------CCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0001 112345778999999999999999999999876
No 360
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1e-36 Score=306.25 Aligned_cols=250 Identities=24% Similarity=0.324 Sum_probs=187.5
Q ss_pred EEeecCCeEEEEEEECC--CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 30 VIGKGSYGVVCSAYDTR--TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~--tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
.||+|+||.||+|.... ....+++|.+... ........+.+|+.+++.++|+||+++++.+... ...|+|||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~-----~~~~lv~e 75 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIES-----IPYLLVLE 75 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCC-----CceEEEEE
Confidence 59999999999996433 4457888877542 2233445678999999999999999999988543 35899999
Q ss_pred cCC-ccHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 108 LME-SDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 108 ~~~-gdL~~~i~~~~-----~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
|++ ++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 76 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 155 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY 155 (269)
T ss_pred eCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchh
Confidence 998 59999987643 246788899999999999999999999999999999999999999999999865322211
Q ss_pred CcccccccccCcccccccccccc-----cCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 182 TAIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 182 ~~~~~~~~~gT~~Y~APEll~~~-----~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
.. ......++..|+|||++... ...++.++|||||||++|+|++ |..||......+.+..+....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-------- 226 (269)
T cd05042 156 YI-TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQ-------- 226 (269)
T ss_pred ee-ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhcc--------
Confidence 11 01223456779999987431 1356789999999999999999 788997765444333221110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
....+.......++..+.+++..|+ .||++|||++++++
T Consensus 227 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 227 -----------------DIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred -----------------CccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 0111111223456788899999998 59999999999975
No 361
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=3e-37 Score=305.36 Aligned_cols=228 Identities=25% Similarity=0.364 Sum_probs=185.0
Q ss_pred cCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-cc
Q 008607 34 GSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SD 112 (560)
Q Consensus 34 G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~-gd 112 (560)
|.+|.||+|++..+++.||+|++.... ...+|...+....||||+++++.+... ..+|+||||++ ++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~~~-----~~~~lv~e~~~~~~ 71 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIVSE-----DSVFLVLQHAEGGK 71 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhheecC-----CeEEEEEecCCCCC
Confidence 899999999999999999999986421 123455555566799999999987433 46899999998 59
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccC
Q 008607 113 LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVAT 192 (560)
Q Consensus 113 L~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT 192 (560)
|.+++.....+++..+..++.||+.||.|||+.||+||||||+||+++.++.++|+|||++....... ....++
T Consensus 72 L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~------~~~~~~ 145 (237)
T cd05576 72 LWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC------DGEAVE 145 (237)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc------ccCCcC
Confidence 99999887789999999999999999999999999999999999999999999999999876543221 234567
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhcc
Q 008607 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272 (560)
Q Consensus 193 ~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~ 272 (560)
..|+|||.+.+ ..++.++||||+||++|+|++|+.||...... + . .
T Consensus 146 ~~y~aPE~~~~--~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~------------------------~---~ 191 (237)
T cd05576 146 NMYCAPEVGGI--SEETEACDWWSLGAILFELLTGKTLVECHPSG-----I------------------------N---T 191 (237)
T ss_pred ccccCCcccCC--CCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----c------------------------c---c
Confidence 78999999865 56888999999999999999999887432110 0 0 0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH-----HHHhcCccc
Q 008607 273 KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA-----EEALADPYF 316 (560)
Q Consensus 273 ~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta-----~elL~hp~f 316 (560)
.... ...+.+++.+.+||.+||+.||++|+++ +++++||||
T Consensus 192 ~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 192 HTTL---NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cccc---CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 0000 1123468889999999999999999985 999999998
No 362
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.9e-38 Score=328.83 Aligned_cols=264 Identities=25% Similarity=0.400 Sum_probs=212.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc-ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
-+-|..++.||-|+||.|++++...|...||+|.+.+. .........+..|-.||..-..+-||+|+-.|.+. .
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDk-----d 702 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDK-----D 702 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccC-----C
Confidence 35588999999999999999999999999999998752 22334456778899999999999999999988544 4
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC-
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN- 178 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~- 178 (560)
.+|+||||+. ||+..++.+.+-|.|+.+++++.+|.+|+++.|+.|+|||||||+|||||.+|.|||.||||+.-...
T Consensus 703 nLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred ceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceec
Confidence 6999999998 59999999999999999999999999999999999999999999999999999999999999964211
Q ss_pred --------CCCC------------------------------cccccccccCcccccccccccccCCCCCccchhhHHHH
Q 008607 179 --------DTPT------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCI 220 (560)
Q Consensus 179 --------~~~~------------------------------~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~i 220 (560)
+... .......+||+.|+|||+|.. ..|+..+|.||.|||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r--~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLAR--TGYTQLCDWWSVGVI 860 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcc--cCccccchhhHhhHH
Confidence 0000 000124689999999999987 689999999999999
Q ss_pred HHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccC
Q 008607 221 FAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFE 300 (560)
Q Consensus 221 l~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~D 300 (560)
||||+.|++||-.....+...+|..+ +.++. ...-.+++.++.+||.++.. +
T Consensus 861 l~em~~g~~pf~~~tp~~tq~kv~nw-----------------~~~l~----------~~~~~~ls~e~~~li~kLc~-s 912 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGETQYKVINW-----------------RNFLH----------IPYQGNLSKEALDLIQKLCC-S 912 (1034)
T ss_pred HHHHhhCCCCccCCCCCcceeeeeeh-----------------hhccc----------cccccccCHHHHHHHHHHhc-C
Confidence 99999999999776544332222110 11111 01124789999999998765 6
Q ss_pred CCCCC---CHHHHhcCccccccc
Q 008607 301 PKDRP---TAEEALADPYFKGLA 320 (560)
Q Consensus 301 P~~Rp---ta~elL~hp~f~~~~ 320 (560)
++.|. .++|+..||||+++.
T Consensus 913 ad~RLGkng~d~vKaHpfFkgID 935 (1034)
T KOG0608|consen 913 ADSRLGKNGADQVKAHPFFKGID 935 (1034)
T ss_pred hhhhhcccchhhhhcCccccccc
Confidence 77886 478899999999764
No 363
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-39 Score=308.54 Aligned_cols=261 Identities=23% Similarity=0.404 Sum_probs=209.0
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHH-hcCCCCccccceeecCCCcCCCccEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLR-LLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~-~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.+-+..||.|+||+|++..|+.+|+..|||+|+.... ..+..+++.|..... .-.+||||+++++.+.. ++.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E-----GdcW 139 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE-----GDCW 139 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-----Ccee
Confidence 3445779999999999999999999999999985433 456678888988764 44699999999998654 4689
Q ss_pred EEEecCCccHHHHHH-----hCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 104 VVFELMESDLHQVIK-----ANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 104 lV~E~~~gdL~~~i~-----~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
|.||+|+-+|..+.+ ....++|+.+-+|....+.||.||.. .+||||||||+|||++..|.+||||||.+-.+.
T Consensus 140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv 219 (361)
T KOG1006|consen 140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV 219 (361)
T ss_pred eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence 999999987655543 24579999999999999999999975 589999999999999999999999999987654
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHh-cCCCCHHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDL-LGTPSPEAIA 256 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~-~g~p~~~~~~ 256 (560)
+.... +...|-+.|||||.+.....+|+.++|+||||++|||+.||+.|+.+-+. .++.+..+ .|.|+.
T Consensus 220 ~SiAk----T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~Vv~gdpp~---- 289 (361)
T KOG1006|consen 220 DSIAK----TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQVVIGDPPI---- 289 (361)
T ss_pred HHHHh----hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHHHHcCCCCe----
Confidence 33222 44578899999999976556799999999999999999999999976443 34433332 122221
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
..+...--+.+..+++||.-||.+|-.+||...+++.+||++-..
T Consensus 290 -------------------l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~ 334 (361)
T KOG1006|consen 290 -------------------LLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYA 334 (361)
T ss_pred -------------------ecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhh
Confidence 112222235788999999999999999999999999999998654
No 364
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7.8e-37 Score=326.03 Aligned_cols=253 Identities=25% Similarity=0.377 Sum_probs=198.7
Q ss_pred CceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~ 96 (560)
++|.+.++||+|+||.||+|++. .+++.||||+++... .......+.+|+.+|..+. ||||+++++++...
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~-- 113 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTA-RSSEKQALMSELKIMSHLGPHLNIVNLLGACTKG-- 113 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCC-ChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC--
Confidence 56889999999999999999853 456789999997532 2233457889999999997 99999999998543
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhCC------------------------------------------------------
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAND------------------------------------------------------ 121 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~~------------------------------------------------------ 121 (560)
..+|+|||||. |+|.+++..+.
T Consensus 114 ---~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (401)
T cd05107 114 ---GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYV 190 (401)
T ss_pred ---CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCcc
Confidence 35899999998 59999986532
Q ss_pred --------------------------------------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCe
Q 008607 122 --------------------------------------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNI 157 (560)
Q Consensus 122 --------------------------------------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NI 157 (560)
.+++..+..|+.||+.||.|||+.+|+||||||+||
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~Ni 270 (401)
T cd05107 191 PMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNV 270 (401)
T ss_pred chhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceE
Confidence 256778889999999999999999999999999999
Q ss_pred eeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCCh
Q 008607 158 LANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNV 236 (560)
Q Consensus 158 Ll~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~ 236 (560)
|++.++.+||+|||+++........ .......++..|+|||.+.+ ..++.++|||||||++|||++ |..||.....
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~--~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNY-ISKGSTFLPLKWMAPESIFN--NLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEeCCCEEEEEecCcceeccccccc-ccCCCcCCCCceeChHHhcC--CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 9999999999999999764322211 11123457788999999976 568899999999999999998 8899976543
Q ss_pred hhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 237 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+.+..... ... .. .....++..+.+||.+||..||.+||++.||++.
T Consensus 348 ~~~~~~~~~----------------------~~~----~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~ 395 (401)
T cd05107 348 NEQFYNAIK----------------------RGY----RM---AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL 395 (401)
T ss_pred hHHHHHHHH----------------------cCC----CC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 332211110 000 00 1123568899999999999999999999999863
No 365
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-36 Score=303.91 Aligned_cols=247 Identities=25% Similarity=0.401 Sum_probs=189.5
Q ss_pred EEEeecCCeEEEEEEECC---CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTR---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~---tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
+.||+|+||.||+|.+.. .+..||||++... ........+.+|+.+++.++||||+++++++.... ...++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~lv 75 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSE----GSPLVV 75 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCC----CCcEEE
Confidence 468999999999998653 3457999988532 23345567889999999999999999999775332 347899
Q ss_pred EecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 106 FELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 106 ~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
|||+. ++|.+++.... .+++..+..++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 76 LPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 99998 59999987643 46788889999999999999999999999999999999999999999999997543221100
Q ss_pred -ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhH
Q 008607 184 -IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNE 261 (560)
Q Consensus 184 -~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~ 261 (560)
.......++..|+|||.+.+ ..++.++|||||||++|||++ |.+||...+..+....+.
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~----------------- 216 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQT--QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL----------------- 216 (262)
T ss_pred ecccccCcCCccccChhHhcc--CccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-----------------
Confidence 11123345778999999876 578899999999999999999 467787655433222111
Q ss_pred HHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 262 KARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 262 ~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
....... ....+..+.+|+.+||..||++||++.+++.
T Consensus 217 ----------~~~~~~~---~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 217 ----------QGRRLLQ---PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred ----------cCCCCCC---CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 0111111 1234678999999999999999999999986
No 366
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=335.42 Aligned_cols=263 Identities=24% Similarity=0.429 Sum_probs=217.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~ 100 (560)
...|+|.++||.|.||.||++.+++++...|+|++... ......+..|.++|+.+. |||++.++++|.-.......
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~---~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~D 94 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT---EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGD 94 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC---ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCC
Confidence 46799999999999999999999999999999988642 233456778999999885 99999999999766556667
Q ss_pred cEEEEEecCC-ccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 101 DIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
++|||||||+ |+..++++. ..++.|+.+.+|++.++.||.+||.+.++|||||-.|||++.++.|||+|||.+....
T Consensus 95 qLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld 174 (953)
T KOG0587|consen 95 QLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 174 (953)
T ss_pred eEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence 8999999998 577777765 5579999999999999999999999999999999999999999999999999997663
Q ss_pred CCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
. +.....+.+||+.|||||++... ...|+..+|+||||++..||.-|.+|+-+..... .+..+...|++
T Consensus 175 s---T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr---aLF~IpRNPPP-- 246 (953)
T KOG0587|consen 175 S---TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR---ALFLIPRNPPP-- 246 (953)
T ss_pred c---ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh---hhccCCCCCCc--
Confidence 3 23344678999999999998532 1347778999999999999999999996654332 22222223322
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
-...+..++..+.+||..||.+|..+||+..++|.|||++.
T Consensus 247 -----------------------kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e 287 (953)
T KOG0587|consen 247 -----------------------KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE 287 (953)
T ss_pred -----------------------cccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence 22334567889999999999999999999999999999983
No 367
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.5e-36 Score=303.61 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=187.8
Q ss_pred EEEeecCCeEEEEEEEC--CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDT--RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~--~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.||+|+||.||+|... .++..+|+|++..... ......+.+|+.+++.++||||+++++.+... ..+++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-----~~~~lv~ 74 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEV-----TPYLLVM 74 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-----CCcEEEE
Confidence 36899999999999754 4567899999875332 23345688999999999999999999987433 3589999
Q ss_pred ecCC-ccHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 107 ELME-SDLHQVIKAND-----DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 107 E~~~-gdL~~~i~~~~-----~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
||++ ++|.+++.... ..++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~ 154 (269)
T cd05087 75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED 154 (269)
T ss_pred ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcc
Confidence 9998 69999986532 35677888999999999999999999999999999999999999999999987543221
Q ss_pred CCcccccccccCccccccccccccc-----CCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFF-----SKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~-----~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
.. .......++..|+|||++.+.. ..++.++|||||||++|||++ |+.||......+.+.....
T Consensus 155 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~--------- 224 (269)
T cd05087 155 YY-VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVR--------- 224 (269)
T ss_pred ee-ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhh---------
Confidence 11 1112345778899999985421 135789999999999999996 9999976554332211100
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.. ....+........+..+.+|+++|+ .||.+|||++||+.
T Consensus 225 --------------~~--~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 225 --------------EQ--QLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred --------------cc--cCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 00 0011111112245778999999998 68999999999974
No 368
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.1e-36 Score=305.75 Aligned_cols=238 Identities=20% Similarity=0.279 Sum_probs=184.3
Q ss_pred EEEeecCCeEEEEEEECC------------CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 29 EVIGKGSYGVVCSAYDTR------------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~------------tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
+.||+|+||.||+|.... ....|++|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~-- 76 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--HRDISLAFFETASMMRQVSHKHIVLLYGVCVRD-- 76 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 468999999999997432 2346888887642 233445678899999999999999999988543
Q ss_pred CCCccEEEEEecCCc-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCc-------EEE
Q 008607 97 REFKDIYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK-------LKI 167 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~-------lKL 167 (560)
...++||||+++ .|..++.. ...+++..++.++.||+.||+|||+.||+||||||+|||++.++. +||
T Consensus 77 ---~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 77 ---VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred ---CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 346999999995 77777765 346999999999999999999999999999999999999987664 899
Q ss_pred ecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHh-hCCCCCCCCChhhHHHHHHHh
Q 008607 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL-TGKPLFPGKNVVHQLDIMTDL 246 (560)
Q Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLl-tG~~pF~~~~~~~~~~~i~~~ 246 (560)
+|||++...... ....++..|+|||.+... ..++.++|||||||++|+|+ .|..||.+....+....
T Consensus 154 ~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~---- 221 (262)
T cd05077 154 SDPGIPITVLSR-------QECVERIPWIAPECVEDS-KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF---- 221 (262)
T ss_pred CCCCCCccccCc-------ccccccccccChhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH----
Confidence 999998654211 235678889999988632 56888999999999999998 58888876543221110
Q ss_pred cCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 247 ~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.... .......+..+.+||.+||+.||.+||++.+||++
T Consensus 222 --------------------~~~~--------~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 222 --------------------YEGQ--------CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred --------------------HhcC--------ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 0000 00112235678999999999999999999999874
No 369
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.2e-37 Score=307.58 Aligned_cols=238 Identities=18% Similarity=0.277 Sum_probs=186.4
Q ss_pred EEEeecCCeEEEEEEECCCCcE-------EEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEK-------VAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~-------vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+.||+|+||.||+|.+...+.. ||+|.+... .......+.+|+.+|+.+.||||+++++++... ..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~-----~~ 73 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCG-----DE 73 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch--hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeC-----CC
Confidence 4699999999999998665543 888887532 233446788899999999999999999998543 35
Q ss_pred EEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCc--------EEEeccc
Q 008607 102 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--------LKICDFG 171 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~--------lKL~DFG 171 (560)
.++||||+. |+|.+++..++ .+++..+..++.||+.||+|||+.||+||||||+|||++.++. +||+|||
T Consensus 74 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 74 SIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 799999998 58999997654 5899999999999999999999999999999999999987764 6999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCC-CCCCCCChhhHHHHHHHhcCCC
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK-PLFPGKNVVHQLDIMTDLLGTP 250 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~-~pF~~~~~~~~~~~i~~~~g~p 250 (560)
++...... ....++..|+|||++.+. ..++.++|||||||++|+|++|. +||...+........
T Consensus 154 ~~~~~~~~-------~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~------- 218 (258)
T cd05078 154 ISITVLPK-------EILLERIPWVPPECIENP-QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY------- 218 (258)
T ss_pred cccccCCc-------hhccccCCccCchhccCC-CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-------
Confidence 88654221 235688899999998652 35788999999999999999995 666544432221110
Q ss_pred CHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 251 SPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
. ... ......+..+.+||.+||+.||++|||++++++.
T Consensus 219 -----------------~---~~~-----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 219 -----------------E---DRH-----QLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred -----------------H---ccc-----cCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 0 000 0112345779999999999999999999999863
No 370
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.4e-36 Score=306.72 Aligned_cols=270 Identities=26% Similarity=0.424 Sum_probs=201.7
Q ss_pred CCceEEEEEEeecCCeEEEEEEEC----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDT----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
...|++.+.||+|+||.||+|... .+++.||||++...... .....+.+|+++++.++|+||+++++++....
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~-- 79 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKPG-- 79 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecCC--
Confidence 356899999999999999999854 35889999998754332 34667899999999999999999998874422
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
....++||||++ ++|.+++.... .+++..+..++.||+.||+|||++||+|+||||+|||++.++.+||+|||++..
T Consensus 80 -~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 80 -GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred -CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 246899999997 59999997754 599999999999999999999999999999999999999999999999999987
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
...............++..|+|||.+.+ ..++.++|||||||++++|++|..||....... ....+......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~--~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~-----~~~~~~~~~~~- 230 (284)
T cd05038 159 LPEDKDYYYVKEPGESPIFWYAPECLRT--SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF-----LRMIGIAQGQM- 230 (284)
T ss_pred cccCCcceeccCCCCCcccccCcHHHcc--CCCCcccchHHHhhhhheeeccCCCcccccchh-----ccccccccccc-
Confidence 6422221111122345567999999876 478889999999999999999999986532211 11111100000
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. .......+......+ ....++..+.+|+.+||..||.+|||+.|+++
T Consensus 231 ---~---~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 231 ---I---VTRLLELLKEGERLP---RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred ---c---HHHHHHHHHcCCcCC---CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 001111111111111 12345688999999999999999999999986
No 371
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.6e-36 Score=302.10 Aligned_cols=236 Identities=18% Similarity=0.277 Sum_probs=186.8
Q ss_pred EEEeecCCeEEEEEEECCCC----------cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCC
Q 008607 29 EVIGKGSYGVVCSAYDTRTG----------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg----------~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~ 98 (560)
+.||+|+||.||+|.+..++ ..+++|.+.... .....+.+|+.+|+.++|+||+++++.+..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH---RDSLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch---hhHHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 46999999999999998777 357888765321 125678899999999999999999998854
Q ss_pred CccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-------cEEEec
Q 008607 99 FKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-------KLKICD 169 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-------~lKL~D 169 (560)
...++||||+. ++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++ .+||+|
T Consensus 73 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 73 -DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred -CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCC
Confidence 24699999998 58999998765 799999999999999999999999999999999999999888 799999
Q ss_pred ccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcC
Q 008607 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 170 FGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g 248 (560)
||++...... ....++..|+|||++.+....++.++|||||||++|+|++ |..||...+........
T Consensus 152 fg~a~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~----- 219 (259)
T cd05037 152 PGIPITVLSR-------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY----- 219 (259)
T ss_pred CCcccccccc-------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHH-----
Confidence 9999764331 2345677899999987632368899999999999999999 57888665422211110
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. .....+ ......+.+||.+||..||.+|||+.++++
T Consensus 220 -------------------~---~~~~~~-----~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 220 -------------------Q---DQHRLP-----MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -------------------h---cCCCCC-----CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 000000 111267899999999999999999999985
No 372
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.9e-36 Score=302.73 Aligned_cols=249 Identities=27% Similarity=0.471 Sum_probs=198.6
Q ss_pred eEEEEEEeecCCeEEEEEEECC-CCcEEEEEEecCcc--------cChhHHHHHHHHHHHHHh-cCCCCccccceeecCC
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIF--------EHVSDATRILREIKLLRL-LRHPDIVEIKHILLPP 94 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~-tg~~vAiK~i~~~~--------~~~~~~~~i~rEi~iL~~-l~HpnIv~l~~i~~~~ 94 (560)
|++.+.||+|+||.||+|.+.. +++.+|+|.+.... ........+.+|+.+++. ++|+||+++++.+...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 8889999999999999999988 78899999886321 122334567789998865 7899999999988543
Q ss_pred CcCCCccEEEEEecCCc-cHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEe
Q 008607 95 SRREFKDIYVVFELMES-DLHQVIKA----NDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~g-dL~~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
...++||||+++ +|.+++.. ...+++..++.++.||+.||.|||+ .+|+|+||||+|||++.++.+||+
T Consensus 82 -----~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~ 156 (269)
T cd08528 82 -----DRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTIT 156 (269)
T ss_pred -----CeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEe
Confidence 468999999985 78777643 3469999999999999999999996 789999999999999999999999
Q ss_pred cccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcC
Q 008607 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 169 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g 248 (560)
|||++....... ......++..|+|||.+.+ ..++.++|||||||++|+|++|++||...+.......+....
T Consensus 157 dfg~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~--~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~- 229 (269)
T cd08528 157 DFGLAKQKQPES----KLTSVVGTILYSCPEIVKN--EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAV- 229 (269)
T ss_pred cccceeeccccc----ccccccCcccCcChhhhcC--CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhcc-
Confidence 999997654322 2245678999999999976 568899999999999999999999997665443332222110
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
..+. .....++.+.+||++||+.||++||++.|+.++
T Consensus 230 ------------------------~~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 230 ------------------------YEPL----PEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred ------------------------CCcC----CcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 0010 112457889999999999999999999998764
No 373
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.1e-36 Score=306.02 Aligned_cols=237 Identities=19% Similarity=0.257 Sum_probs=183.4
Q ss_pred EEeecCCeEEEEEEECCC------------------------CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc
Q 008607 30 VIGKGSYGVVCSAYDTRT------------------------GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV 85 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~t------------------------g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv 85 (560)
.||+|+||.||+|....+ ...|++|++... .......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHHHHHHHHHHHHHHhcCCCCCee
Confidence 599999999999974322 245888888632 223345688899999999999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCCc-cHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC
Q 008607 86 EIKHILLPPSRREFKDIYVVFELMES-DLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC 163 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~ 163 (560)
++++++... ...|+||||+++ +|..++.. .+.+++..+..++.||+.||+|||+.||+||||||+|||++..+
T Consensus 80 ~~~~~~~~~-----~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 80 FVHGVCVRG-----SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLG 154 (274)
T ss_pred eEEEEEEeC-----CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence 999988543 357999999995 78888865 45789999999999999999999999999999999999997654
Q ss_pred -------cEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHh-hCCCCCCCCC
Q 008607 164 -------KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL-TGKPLFPGKN 235 (560)
Q Consensus 164 -------~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLl-tG~~pF~~~~ 235 (560)
.+||+|||++...... ....++..|+|||.+.+. ..++.++|||||||++|||+ +|+.||.+..
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGG-NSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cccCccceeeecCCccccccccc-------cccccCCcccCchhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 4899999988643221 223577889999988653 46889999999999999985 6999997654
Q ss_pred hhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 236 VVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 236 ~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
..+.... +.. ... .....++.+.+||.+||+.||++|||+.++|++
T Consensus 227 ~~~~~~~------------------------~~~---~~~-----~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 227 PSEKERF------------------------YEK---KHR-----LPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred hHHHHHH------------------------HHh---ccC-----CCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 3322111 110 000 012235679999999999999999999999874
No 374
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.1e-36 Score=303.40 Aligned_cols=245 Identities=27% Similarity=0.404 Sum_probs=192.4
Q ss_pred EEEeecCCeEEEEEEECCCC------cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 29 EVIGKGSYGVVCSAYDTRTG------EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg------~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.||+|+||.||+|.+.... ..+|||.+.... .......+.+|+.+|+.++||||+++++++... ...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-----~~~ 74 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLN-----EPQ 74 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCC-----CCe
Confidence 36999999999999876544 689999886432 123456788999999999999999999988543 358
Q ss_pred EEEEecCC-ccHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-----cEEEec
Q 008607 103 YVVFELME-SDLHQVIKAN-------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-----KLKICD 169 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~-------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-----~lKL~D 169 (560)
|+||||+. ++|.+++... ..+++..+..++.||+.||+|||+.+|+|+||||+|||++.++ .+||+|
T Consensus 75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECC
Confidence 99999998 5999998642 2478899999999999999999999999999999999999887 899999
Q ss_pred ccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcC
Q 008607 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 170 FGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g 248 (560)
||++.......... ......++..|+|||.+.+ ..++.++|||||||++|+|++ |+.||...+..+....+..
T Consensus 155 fg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~--~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~--- 228 (269)
T cd05044 155 FGLARDIYKSDYYR-KEGEGLLPVRWMAPESLLD--GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA--- 228 (269)
T ss_pred cccccccccccccc-cCcccCCCccccCHHHHcc--CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc---
Confidence 99997543322111 1122345678999999876 578899999999999999998 9999987665443322211
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... .......+..+.+||.+||..+|.+||+++++++
T Consensus 229 ------------------------~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 229 ------------------------GGR---LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred ------------------------CCc---cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 000 0112356788999999999999999999999875
No 375
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1.3e-35 Score=298.78 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=186.3
Q ss_pred EEeecCCeEEEEEEECCC--CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEe
Q 008607 30 VIGKGSYGVVCSAYDTRT--GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~t--g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
.||+|+||.||++..... ...+++|.+... ........+.+|+.+++.++||||+++++.+... ..+|+|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~-----~~~~lv~e 75 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN-ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEA-----IPYLLVFE 75 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC-CChHHHHHHHHHHHHHhccCCcchhheEEEecCC-----CccEEEEe
Confidence 599999999999975433 345677776532 2233456789999999999999999999988543 35899999
Q ss_pred cCC-ccHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 108 LME-SDLHQVIKAN----DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 108 ~~~-gdL~~~i~~~----~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
|+. ++|.+++... ..+++..++.++.||+.||+|||+.+|+||||||+|||++.++.+||+|||++.........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 155 (268)
T cd05086 76 YCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYI 155 (268)
T ss_pred cCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhh
Confidence 998 5999998764 24677788999999999999999999999999999999999999999999998643221110
Q ss_pred cccccccccCcccccccccccc-----cCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHH
Q 008607 183 AIFWTDYVATRWYRAPELCGSF-----FSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIA 256 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~-----~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~ 256 (560)
......+++..|+|||++... ...++.++|||||||++|||++ |..||...+..+.+..+..-
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~---------- 224 (268)
T cd05086 156 -ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKD---------- 224 (268)
T ss_pred -hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhh----------
Confidence 111345688899999998531 1245789999999999999997 56788776654443332210
Q ss_pred HhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 257 RVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
. .....-......+++.+.+||..|| .||.+||+++++++
T Consensus 225 -------------~--~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 225 -------------Q--QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred -------------c--ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 0 0000011112346788999999999 68999999999975
No 376
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-36 Score=315.26 Aligned_cols=262 Identities=26% Similarity=0.415 Sum_probs=195.3
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.+.|.-..+||+|+||.||+|.-..+ ..||||++....... ...|.+|+.+|..++|||+|+|+++|..... .
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~ 146 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGGE----H 146 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCCc----e
Confidence 36777778999999999999986544 899999887533221 4459999999999999999999999964431 4
Q ss_pred EEEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 102 IYVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~g---IiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
.+||+|||. |+|.+.+.... .++|.....|+.++++||+|||... |+|||||++|||+|++...||+|||+|+.
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL 226 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence 899999998 79999997755 7999999999999999999999865 99999999999999999999999999965
Q ss_pred ccCCCCCccccccc-ccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhh---HHHHHHHhcCCCC
Q 008607 176 AFNDTPTAIFWTDY-VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVH---QLDIMTDLLGTPS 251 (560)
Q Consensus 176 ~~~~~~~~~~~~~~-~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~---~~~~i~~~~g~p~ 251 (560)
.... ....... .||..|+|||.+.. ...+.++|||||||+|.||++|+.+........ ........
T Consensus 227 ~~~~---~~~~~~~~~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~----- 296 (361)
T KOG1187|consen 227 GPEG---DTSVSTTVMGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL----- 296 (361)
T ss_pred CCcc---ccceeeecCCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH-----
Confidence 4321 1111222 79999999999865 578899999999999999999998876533111 11111111
Q ss_pred HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 252 PEAIARVRNEKARRYLSSMRKKKPIPFSQKFP--NANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
+....+...++ ..... ..++ ..-..+..+..+|++.+|.+||++.|++.
T Consensus 297 ------~~~~~~~eiiD----~~l~~--~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 297 ------LEEGKLREIVD----PRLKE--GEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred ------HHCcchhheeC----CCccC--CCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 00001111111 11000 1111 11223677889999999999999999754
No 377
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=314.04 Aligned_cols=269 Identities=26% Similarity=0.443 Sum_probs=212.0
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEec--Cc---ccChhHHHHHHHHHHHHHhcCCCCccccceeecCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN--DI---FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPP 94 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~--~~---~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~ 94 (560)
....||-++.+||+|+|+.||+|.|....+.||||+-. +. ...........||..|-+.|.||.||+++++|.-.
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 34689999999999999999999999999999999743 11 01112235577999999999999999999998543
Q ss_pred CcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeeeCC---CCcEEEe
Q 008607 95 SRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANA---DCKLKIC 168 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~g--IiHrDLKP~NILl~~---~~~lKL~ 168 (560)
. ..+|.|+|||+| ||.-+++.+.-++|.+++.|+.||+.||.||.... |||-||||.|||+.. -|.+||.
T Consensus 540 t----dsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 540 T----DSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred c----ccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEee
Confidence 3 357999999998 89999999989999999999999999999999774 999999999999754 3779999
Q ss_pred cccccccccCCCCCc----ccccccccCccccccccccc--ccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHH
Q 008607 169 DFGLARVAFNDTPTA----IFWTDYVATRWYRAPELCGS--FFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDI 242 (560)
Q Consensus 169 DFGla~~~~~~~~~~----~~~~~~~gT~~Y~APEll~~--~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~ 242 (560)
||||+++...+.... ...+...||.||++||.+.- .-.+.+.++||||+|||||.++.|+.||..+.... ++
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ--dI 693 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ--DI 693 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH--HH
Confidence 999999876554432 22345789999999998632 12457889999999999999999999996543222 11
Q ss_pred HHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 243 MTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 243 i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
+.. +.+.+...+.|. .-|-+++++++||++||++--++|..+.++-.||||.
T Consensus 694 Lqe----------------------NTIlkAtEVqFP-~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll 745 (775)
T KOG1151|consen 694 LQE----------------------NTILKATEVQFP-PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL 745 (775)
T ss_pred Hhh----------------------hchhcceeccCC-CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence 111 001111111111 1256799999999999999999999999999999996
No 378
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=298.22 Aligned_cols=263 Identities=23% Similarity=0.422 Sum_probs=212.1
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~ 100 (560)
+.|.++++||+|+|..|.+++++.|.+.||+|++++.. ....+..-+..|-.+...- +||.+|.++..|.+.++
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesr---- 325 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESR---- 325 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccce----
Confidence 67999999999999999999999999999999998643 3344556677888888766 59999999999977764
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+++|.||+. |||.-.+++..++++++++++...|+.||.|||+.|||.||||.+|+|+|..|.+||.|+|.++.-...
T Consensus 326 -lffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 326 -LFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred -EEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 899999998 589888888889999999999999999999999999999999999999999999999999998753222
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCC--CCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP--GKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~--~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
....+++|||+.|.|||++.+ ..|+.++|.|+|||+++||+.|+.||. |.+..++
T Consensus 405 ---gd~tstfcgtpnyiapeilrg--eeygfsvdwwalgvlmfemmagrspfdivgm~n~d~------------------ 461 (593)
T KOG0695|consen 405 ---GDTTSTFCGTPNYIAPEILRG--EEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDM------------------ 461 (593)
T ss_pred ---CcccccccCCCcccchhhhcc--cccCceehHHHHHHHHHHHHcCCCCcceecCCCccc------------------
Confidence 223367899999999999998 689999999999999999999999995 1111110
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCC------CHHHHhcCccccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRP------TAEEALADPYFKGLA 320 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rp------ta~elL~hp~f~~~~ 320 (560)
..++|+-.+.-.+.+.+ ...++-.+..+|+..|.+||++|. ...++-.|+||+.+.
T Consensus 462 ----ntedylfqvilekqiri---prslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id 523 (593)
T KOG0695|consen 462 ----NTEDYLFQVILEKQIRI---PRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID 523 (593)
T ss_pred ----chhHHHHHHHhhhcccc---cceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence 01122221111111111 123456677899999999999995 478999999998653
No 379
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-35 Score=314.13 Aligned_cols=251 Identities=23% Similarity=0.383 Sum_probs=201.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCc---E-EEEEEecC-cccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGE---K-VAIKKIND-IFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~---~-vAiK~i~~-~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
++-.+.++||+|+||.||+|.-+..+. . ||+|..+. ..........+.+|.++++.++|||||+++|+.....
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~-- 234 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE-- 234 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC--
Confidence 445666999999999999998765422 3 89998874 2345566788999999999999999999999986543
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 98 EFKDIYVVFELME-SDLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~~-lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
-+|||||+|. |+|.+++++++. ++..+...++++.++||+|||++++|||||-..|+|++.++.+||+||||++.
T Consensus 235 ---Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 235 ---PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred ---ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 4899999998 599999999874 99999999999999999999999999999999999999999999999999875
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
...-.... ...-....|+|||.+.. ..|+.++|||||||++||+++ |..||.+....+....|...
T Consensus 312 ~~~~~~~~---~~~klPirWLAPEtl~~--~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~-------- 378 (474)
T KOG0194|consen 312 GSQYVMKK---FLKKLPIRWLAPETLNT--GIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN-------- 378 (474)
T ss_pred Ccceeecc---ccccCcceecChhhhcc--CccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc--------
Confidence 42111000 01124457999999987 589999999999999999999 78999998877655544220
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
..+.+. ....+..+..++.+|+..||++|||+.++.+
T Consensus 379 ------------------~~r~~~---~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 379 ------------------GYRMPI---PSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred ------------------CccCCC---CCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 000111 1245667888999999999999999999865
No 380
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=100.00 E-value=3e-36 Score=306.03 Aligned_cols=286 Identities=29% Similarity=0.449 Sum_probs=213.9
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECC---CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTR---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSR 96 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~---tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~ 96 (560)
+.+.|.++++||.|+|++||++.+.. .++.||+|.|.. .+...++.+|+++|..+. +.||+++.+.+
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~----ts~p~ri~~El~~L~~~gG~~ni~~~~~~~----- 104 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYR----TSSPSRILNELEMLYRLGGSDNIIKLNGCF----- 104 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccc----ccCchHHHHHHHHHHHhccchhhhcchhhh-----
Confidence 45779999999999999999999888 889999999874 345678999999999886 89999999988
Q ss_pred CCCccEEEEEecCCcc-HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccccc
Q 008607 97 REFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLAR 174 (560)
Q Consensus 97 ~~~~~i~lV~E~~~gd-L~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGla~ 174 (560)
+....+.+|+||++.+ ..+++ . .++...++.+++.++.||+++|.+|||||||||+|+|.+.. ++-.|+|||||.
T Consensus 105 rnnd~v~ivlp~~~H~~f~~l~-~--~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 105 RNNDQVAIVLPYFEHDRFRDLY-R--SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred ccCCeeEEEecccCccCHHHHH-h--cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence 4445799999999974 44444 3 37789999999999999999999999999999999999864 778999999997
Q ss_pred cccCC--------------CC-----------------Cc----------ccccccccCcccccccccccccCCCCCccc
Q 008607 175 VAFND--------------TP-----------------TA----------IFWTDYVATRWYRAPELCGSFFSKYTPAID 213 (560)
Q Consensus 175 ~~~~~--------------~~-----------------~~----------~~~~~~~gT~~Y~APEll~~~~~~y~~~~D 213 (560)
..... .+ .. ...-...||++|+|||++... ...++++|
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~-~~QttaiD 260 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRC-PRQTTAID 260 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhc-cCcCCccc
Confidence 21100 00 00 001246799999999999875 66789999
Q ss_pred hhhHHHHHHHHhhCCCCC-CCCChhhHHHHHHHhcCCCCHHHHHHhhh-------------HHHHHHH-----HhhccCC
Q 008607 214 IWSIGCIFAELLTGKPLF-PGKNVVHQLDIMTDLLGTPSPEAIARVRN-------------EKARRYL-----SSMRKKK 274 (560)
Q Consensus 214 IWSlG~il~eLltG~~pF-~~~~~~~~~~~i~~~~g~p~~~~~~~~~~-------------~~~~~~l-----~~~~~~~ 274 (560)
|||.|||+..+++++.|| ...+..+.+..|..++|.-.......... .+...-+ ..+.+..
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 999999999999999775 56677777777777776432222111100 0111111 1111111
Q ss_pred C--CCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 275 P--IPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 275 ~--~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
. ..........+..+.|||.+||..||.+|+||+++|.||||...
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 1 11111122345689999999999999999999999999999843
No 381
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.2e-36 Score=325.17 Aligned_cols=249 Identities=26% Similarity=0.431 Sum_probs=205.2
Q ss_pred CceEEEEEEeecCCeEEEEEEEC-----CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDT-----RTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRR 97 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~-----~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~ 97 (560)
+.-++.+.||+|+||.||+|+-. .....||||.+++. ........|.||+++|..|+|||||++++++...
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--- 561 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCREG--- 561 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC---
Confidence 45677899999999999999753 23457999999853 2233567899999999999999999999999543
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC----------C----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND----------D----LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~----------~----lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~ 162 (560)
+-+|||||||. |||.++++.+. . |+..+...|+.||+.|+.||-++.++||||-..|+||.++
T Consensus 562 --~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 562 --DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred --CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccc
Confidence 45899999999 89999997632 3 7889999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHH
Q 008607 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLD 241 (560)
Q Consensus 163 ~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~ 241 (560)
..|||+||||++...+.+.-... ....-...||+||-+.- .+|+.++||||+||+|||+++ |+-||.|....+-++
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~-~~t~lPIRWMppEsIly--~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVR-GNTLLPIRWMPPESILY--GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred eEEEecccccchhhhhhhhhccc-CCceeeeecCCHHHhhc--CcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 99999999999875444332211 11223456999998865 689999999999999999998 889999988877766
Q ss_pred HHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 008607 242 IMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 310 (560)
Q Consensus 242 ~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~el 310 (560)
.|..- + .-.+..+++.++-+|+..||+.+|++||++.||
T Consensus 717 ~i~~g---------------------------~---lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI 755 (774)
T KOG1026|consen 717 CIRAG---------------------------Q---LLSCPENCPTEVYSLMLECWNENPKRRPSFKEI 755 (774)
T ss_pred HHHcC---------------------------C---cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 66531 1 123446789999999999999999999999998
No 382
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=3.7e-34 Score=279.75 Aligned_cols=242 Identities=39% Similarity=0.655 Sum_probs=197.5
Q ss_pred CCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc-cH
Q 008607 35 SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES-DL 113 (560)
Q Consensus 35 ~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL 113 (560)
+||.||+|.+..+|+.+++|++........ ...+.+|+.+++.++|+||+++++.+... ...++|+|++++ +|
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~l~~e~~~~~~L 74 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFEDE-----DKLYLVMEYCDGGDL 74 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheeeC-----CEEEEEEeCCCCCCH
Confidence 589999999999999999999875322211 57888999999999999999999988543 468999999997 99
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCc
Q 008607 114 HQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATR 193 (560)
Q Consensus 114 ~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~ 193 (560)
..++.....+++..++.++.+++.+|.+||+.+|+|+||+|.||+++.++.++|+|||++....... ......++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----~~~~~~~~~ 150 (244)
T smart00220 75 FDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----LLTTFVGTP 150 (244)
T ss_pred HHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc----ccccccCCc
Confidence 9999877669999999999999999999999999999999999999999999999999998764432 124467888
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC-ChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhcc
Q 008607 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK-NVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRK 272 (560)
Q Consensus 194 ~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~-~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~ 272 (560)
.|++||.+.+ ..++.++||||||+++++|++|..||... +....++.+..
T Consensus 151 ~~~~pE~~~~--~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~--------------------------- 201 (244)
T smart00220 151 EYMAPEVLLG--KGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGK--------------------------- 201 (244)
T ss_pred CCCCHHHHcc--CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhc---------------------------
Confidence 9999999875 56788999999999999999999999763 22222111110
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 273 KKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 273 ~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
...........++..+.+++.+||..||++||++.++++||||
T Consensus 202 -~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 202 -PKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred -cCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 0111111111267889999999999999999999999999997
No 383
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-35 Score=317.95 Aligned_cols=270 Identities=30% Similarity=0.450 Sum_probs=202.3
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC-cCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS-RRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~-~~~ 98 (560)
++..-+...+.||+|+||.||+++++.||+.||||.++... .....++..+|+++|++|+|+|||+++++=-+.. .-.
T Consensus 10 ~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~ 88 (732)
T KOG4250|consen 10 GENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLV 88 (732)
T ss_pred CCCcceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcc
Confidence 55667888999999999999999999999999999998643 4567788899999999999999999988753221 111
Q ss_pred CccEEEEEecCC-ccHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC--CCC--cEEEecc
Q 008607 99 FKDIYVVFELME-SDLHQVIKA---NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN--ADC--KLKICDF 170 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~---~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~--~~~--~lKL~DF 170 (560)
...-.+|||||. |+|..++.+ ...|++.++..++..+..||.|||++||+||||||.||++- .+| ..||+||
T Consensus 89 ~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 89 TRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred cccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence 234589999998 599999975 33699999999999999999999999999999999999863 334 3799999
Q ss_pred cccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhH-HHHHH-HhcC
Q 008607 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQ-LDIMT-DLLG 248 (560)
Q Consensus 171 Gla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~-~~~i~-~~~g 248 (560)
|.|+....+. .+.+.+||+.|.+||++.. ...|+..+|.|||||++|+++||..||........ ...+. ...+
T Consensus 169 G~Arel~d~s----~~~S~vGT~~YLhPel~E~-q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tk 243 (732)
T KOG4250|consen 169 GAARELDDNS----LFTSLVGTEEYLHPELYER-QKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITK 243 (732)
T ss_pred cccccCCCCC----eeeeecCchhhcChHHHhh-ccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhcc
Confidence 9998765444 4578999999999999974 25788899999999999999999999964322210 11111 1112
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCC---CC----HHHHHHHHHhcccCCCCCCC
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPN---AN----PLALRLLERMLAFEPKDRPT 306 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~s----~~~~dLI~~mL~~DP~~Rpt 306 (560)
.|+.-.+... .....|+.|+..+|- ++ ..+..+|..||..||.+|-.
T Consensus 244 kp~~v~i~~~-----------~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 244 KPSGVAIGAQ-----------EEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGH 297 (732)
T ss_pred CCCceeEeee-----------cccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCC
Confidence 2222111100 111234444444432 22 23556889999999999983
No 384
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.4e-34 Score=307.86 Aligned_cols=277 Identities=18% Similarity=0.261 Sum_probs=187.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEEC----------------CCCcEEEEEEecCcccCh------------hHHHHHHHH
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDT----------------RTGEKVAIKKINDIFEHV------------SDATRILRE 72 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~----------------~tg~~vAiK~i~~~~~~~------------~~~~~i~rE 72 (560)
..++|++.++||+|+||+||+|.+. ..++.||||++....... ........|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 3568999999999999999999752 345679999986421110 011123346
Q ss_pred HHHHHhcCCCCc-----cccceeecCCCc---CCCccEEEEEecCC-ccHHHHHHhC-----------------------
Q 008607 73 IKLLRLLRHPDI-----VEIKHILLPPSR---REFKDIYVVFELME-SDLHQVIKAN----------------------- 120 (560)
Q Consensus 73 i~iL~~l~HpnI-----v~l~~i~~~~~~---~~~~~i~lV~E~~~-gdL~~~i~~~----------------------- 120 (560)
+.++..++|.++ +.+++++..... ......++|+||++ ++|.+++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776554 556665543211 12345899999998 5888887532
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCccccccc
Q 008607 121 -DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPE 199 (560)
Q Consensus 121 -~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APE 199 (560)
..+++..++.++.||+.||.|||+.+|+||||||+|||++.++.+||+|||+++......... .....+|+.|+|||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~--~~~g~~tp~Y~aPE 380 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFN--PLYGMLDPRYSPPE 380 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccC--ccccCCCcceeChh
Confidence 124567889999999999999999999999999999999999999999999997543322111 11234578999999
Q ss_pred ccccccC------------------CCC--CccchhhHHHHHHHHhhCCC-CCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 200 LCGSFFS------------------KYT--PAIDIWSIGCIFAELLTGKP-LFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 200 ll~~~~~------------------~y~--~~~DIWSlG~il~eLltG~~-pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
.+..... .|+ .+.||||+|||+|+|++|.. ||.+....... . ...
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~---~-----------~~~ 446 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTE---L-----------RQY 446 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhH---H-----------hhc
Confidence 8753100 122 24799999999999999985 77543211110 0 000
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCC---CCCCCHHHHhcCcccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEP---KDRPTAEEALADPYFK 317 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP---~~Rpta~elL~hp~f~ 317 (560)
.+. ...+... ......+. .+...++.+.|||.+||..+| .+|+|++|+|+||||.
T Consensus 447 ~~~--~~~~r~~-~~~~~~~~-~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 447 DND--LNRWRMY-KGQKYDFS-LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred cch--HHHHHhh-cccCCCcc-cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 000 0001111 11122222 356678999999999999876 6899999999999996
No 385
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=326.10 Aligned_cols=252 Identities=23% Similarity=0.407 Sum_probs=204.1
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCC-----cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTG-----EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg-----~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
...-++.+.||+|+||.||.|.-.... ..||||.+.+. .+..+...|++|..+|+.+.|||||+++++++...
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~-~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~- 768 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL-SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG- 768 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc-CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC-
Confidence 356788999999999999999754432 34999999753 45567788999999999999999999999998743
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhC-------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEe
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAN-------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~-------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
..+|++|||+ |||..+|++. ..++......|+.||++|+.||+++++|||||...|+|++....+||+
T Consensus 769 ----~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa 844 (1025)
T KOG1095|consen 769 ----PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA 844 (1025)
T ss_pred ----CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc
Confidence 5799999999 5999999876 258999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhc
Q 008607 169 DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247 (560)
Q Consensus 169 DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~ 247 (560)
|||+|+.......-... ....--..|||||.+.. ..++.++|||||||++||+++ |..||++.+..+.+.....-
T Consensus 845 DFGlArDiy~~~yyr~~-~~a~lPvkWm~PEsl~d--~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g- 920 (1025)
T KOG1095|consen 845 DFGLARDIYDKDYYRKH-GEAMLPVKWMPPESLKD--GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG- 920 (1025)
T ss_pred ccchhHhhhhchheecc-CccccceecCCHHHHhh--cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC-
Confidence 99999943322221110 01122346999999987 689999999999999999999 78999998876655432221
Q ss_pred CCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 248 GTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 248 g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
-+ -...+.++..+-+||..||+.+|++||++..|++
T Consensus 921 ----------------------gR-------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 921 ----------------------GR-------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ----------------------Cc-------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 10 0112466777889999999999999999999986
No 386
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-35 Score=315.00 Aligned_cols=250 Identities=30% Similarity=0.452 Sum_probs=193.2
Q ss_pred EEEEEeecCCeE-EEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEE
Q 008607 27 IEEVIGKGSYGV-VCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 27 i~~~IG~G~~G~-Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
-.+++|.|+.|+ ||+|. -.|+.||||.+-. .....+.||+.+|+.-. |||||++++.- .+...+||
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~E-----~d~qF~YI 580 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGV--YEGREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCSE-----QDRQFLYI 580 (903)
T ss_pred cHHHcccCCCCcEEEEEe--eCCceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEeec-----cCCceEEE
Confidence 346789999996 69995 4688999998753 34456789999999885 99999987754 33356899
Q ss_pred EEecCCccHHHHHHhCC-C---CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC---C--CcEEEeccccccc
Q 008607 105 VFELMESDLHQVIKAND-D---LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA---D--CKLKICDFGLARV 175 (560)
Q Consensus 105 V~E~~~gdL~~~i~~~~-~---lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~---~--~~lKL~DFGla~~ 175 (560)
..|+|..+|.++++... . ......+.++.|++.||++||+.+|+||||||+||||.. + .+++|+|||+++.
T Consensus 581 alELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 581 ALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred EehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 99999999999998741 1 111455788999999999999999999999999999986 3 4689999999998
Q ss_pred ccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhC-CCCCCCCChhhHHHHHHHhcCCCCHHH
Q 008607 176 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVHQLDIMTDLLGTPSPEA 254 (560)
Q Consensus 176 ~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG-~~pF~~~~~~~~~~~i~~~~g~p~~~~ 254 (560)
...+...-.......||-.|+|||++.. ..-+.++|||||||++|..++| ..||...- ..+.+++..
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~--~~~~~avDiFslGCvfyYvltgG~HpFGd~~-~R~~NIl~~--------- 728 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLRE--DRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL-ERQANILTG--------- 728 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhc--cccCcccchhhcCceEEEEecCCccCCCchH-HhhhhhhcC---------
Confidence 8776665555677889999999999977 3456799999999999999997 79995432 222221111
Q ss_pred HHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 255 IARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.. .+...-+....++.|||.+||.+||..||+|.++|.||+|-...
T Consensus 729 ------------------~~--~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~e 774 (903)
T KOG1027|consen 729 ------------------NY--TLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDSE 774 (903)
T ss_pred ------------------cc--ceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCChH
Confidence 00 01111112222899999999999999999999999999997543
No 387
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-33 Score=290.20 Aligned_cols=246 Identities=22% Similarity=0.434 Sum_probs=207.4
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
....+..+||-|-||.||.++.++-.-.||||.++ .+......|+.|..+|+.++|||+|+|+++|.... -+
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK---EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-----PF 338 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-----PF 338 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhh---hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-----Ce
Confidence 34567789999999999999999999999999987 35567889999999999999999999999996543 48
Q ss_pred EEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
|||+|||. |+|.++++..+ .++.-.+.+++.||..|+.||...++|||||-..|.|+.++..|||+||||++....+
T Consensus 339 YIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD 418 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD 418 (1157)
T ss_pred EEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC
Confidence 99999998 89999998755 4778888999999999999999999999999999999999999999999999998776
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
+.+.. ...--..-|.|||-|.- ..++.++|||+|||+|||+.| |-.||+|-+....+.++.+-+.
T Consensus 419 TYTAH--AGAKFPIKWTAPEsLAy--NtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR---------- 484 (1157)
T KOG4278|consen 419 TYTAH--AGAKFPIKWTAPESLAY--NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR---------- 484 (1157)
T ss_pred ceecc--cCccCcccccCcccccc--cccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc----------
Confidence 65431 11122356899998854 578899999999999999998 7799999876665555443211
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHH
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEA 310 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~el 310 (560)
- ....++++.+-.|++.||+++|.+||++.|+
T Consensus 485 -------------M-------~~PeGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 485 -------------M-------DGPEGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred -------------c-------cCCCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 0 1124788999999999999999999999998
No 388
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=304.83 Aligned_cols=263 Identities=27% Similarity=0.428 Sum_probs=218.3
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
+-..+|+++.+||.|+||.||+|+|+.+++..|+|+++.. -..+..-+..|+-+++..+|+||+.+++.+....
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLe--p~dd~~~iqqei~~~~dc~h~nivay~gsylr~d---- 85 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLE--PGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD---- 85 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeecc--CCccccccccceeeeecCCCcChHHHHhhhhhhc----
Confidence 4456799999999999999999999999999999999753 3345566778999999999999999999886443
Q ss_pred ccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 100 KDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
.++|+||||+| +|.+...--+.+++.++.+..+..++||+|||+.|-+|||||-.|||+++.|.+||+|||.+.....
T Consensus 86 -klwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 86 -KLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred -CcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhh
Confidence 48999999995 8888888888999999999999999999999999999999999999999999999999998865432
Q ss_pred CCCCcccccccccCccccccccc-ccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll-~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
+.....+++||++|||||+- -+....|...+|||++|+...||-.-++|.........+.+|++..-.|.
T Consensus 165 ---ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp------ 235 (829)
T KOG0576|consen 165 ---TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPP------ 235 (829)
T ss_pred ---hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCC------
Confidence 22334678999999999985 22236799999999999999999988888765555544445544322221
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
.. ..-..+++.+-+|++.+|.++|++|||++.+|+|||...
T Consensus 236 -------------------~l-kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 236 -------------------TL-KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred -------------------cc-cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 11 122356788999999999999999999999999999864
No 389
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-34 Score=301.28 Aligned_cols=256 Identities=25% Similarity=0.380 Sum_probs=207.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECC-CCc--EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTR-TGE--KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~-tg~--~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
++..+.|+||+|+||+|+.|..+. +|+ .||||+++...... ....|++|+.+|..|+|+|+++||++.++..
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~-~mddflrEas~M~~L~H~hliRLyGvVl~qp---- 184 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA-IMDDFLREASHMLKLQHPHLIRLYGVVLDQP---- 184 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch-hHHHHHHHHHHHHhccCcceeEEeeeeccch----
Confidence 455677899999999999997765 343 58999998543332 6678999999999999999999999997643
Q ss_pred ccEEEEEecCC-ccHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 100 KDIYVVFELME-SDLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+.||||++. |+|++.+.+ ...|-....+.|+.||+.|+.||.++++|||||-..|||+-....||||||||.+.+
T Consensus 185 --~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaL 262 (1039)
T KOG0199|consen 185 --AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRAL 262 (1039)
T ss_pred --hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceecc
Confidence 689999999 799999987 335888999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
.............-....|+|||.|.- ..++.++|+|++||+||||++ |..||.|.+....+++|.+.-.
T Consensus 263 g~ned~Yvm~p~rkvPfAWCaPEsLrh--~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er------- 333 (1039)
T KOG0199|consen 263 GENEDMYVMAPQRKVPFAWCAPESLRH--RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER------- 333 (1039)
T ss_pred CCCCcceEecCCCcCcccccCHhHhcc--ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc-------
Confidence 655433222222233456999999976 578999999999999999999 6799999998877766542110
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
-...+.++..+-+++.+||..+|.+|||+..|.+.-++.
T Consensus 334 -----------------------LpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 334 -----------------------LPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred -----------------------CCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 011245678899999999999999999999886544443
No 390
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=295.37 Aligned_cols=246 Identities=26% Similarity=0.464 Sum_probs=196.5
Q ss_pred EEEEEEeecCCeEEEEEEECC--CCc--EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 26 KIEEVIGKGSYGVVCSAYDTR--TGE--KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~~--tg~--~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.+.++||.|-||.||.|.-.. .|+ .||||..+.. ....+.+.|+.|..+|+.+.||||+++++++... -
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d-~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~------P 464 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTD-CTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ------P 464 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccC-CChhhHHHHHHHHHHHHhCCCcchhheeeeeecc------c
Confidence 345789999999999996432 333 5888877643 3344577899999999999999999999999654 3
Q ss_pred EEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+|||||++. |.|..+++.+. .++......+++||+.||.|||+.+++||||-..|||+.....|||+||||++....+
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 799999999 89999998865 5899999999999999999999999999999999999999999999999999986544
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
..-.. +...-..-|||||-+.- ..++.++|||.|||++||++. |..||.|-...+.+..|.+
T Consensus 545 ~yYka--S~~kLPIKWmaPESINf--RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEn------------- 607 (974)
T KOG4257|consen 545 AYYKA--SRGKLPIKWMAPESINF--RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIEN------------- 607 (974)
T ss_pred chhhc--cccccceeecCccccch--hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecC-------------
Confidence 32111 11122345999999864 578999999999999999776 8899988654443322221
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ..+.+++++.+-.|+.+||+.||.+||++.||..
T Consensus 608 --------------GeR---lP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 608 --------------GER---LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred --------------CCC---CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 111 1234788999999999999999999999988753
No 391
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=303.56 Aligned_cols=257 Identities=28% Similarity=0.445 Sum_probs=217.6
Q ss_pred ccccCCCCceEEEEEEeecCCeEEEEEEECCCCc---EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeec
Q 008607 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGE---KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILL 92 (560)
Q Consensus 16 ~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~---~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~ 92 (560)
|+.-...+...|.++||.|.||.||+++.+..|+ .||||.++. .-..+....|+.|..||-++.||||+.|.++..
T Consensus 622 FakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~-GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT 700 (996)
T KOG0196|consen 622 FAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKA-GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT 700 (996)
T ss_pred hhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeecc-CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence 3444556778999999999999999999987775 699999974 334556678999999999999999999999983
Q ss_pred CCCcCCCccEEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecc
Q 008607 93 PPSRREFKDIYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DF 170 (560)
- .+-+.||+|||+ |.|..+++.++ .|+.-++.-+++.|+.|++||-+.|.+||||-..|||||.+-.+|++||
T Consensus 701 k-----s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 701 K-----SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred c-----CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccc
Confidence 2 245899999999 79999998765 6999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCCccccccccc--CcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhc
Q 008607 171 GLARVAFNDTPTAIFWTDYVA--TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247 (560)
Q Consensus 171 Gla~~~~~~~~~~~~~~~~~g--T~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~ 247 (560)
||+|...++.+.. .++.-| ...|.|||.+.- .+++.++||||+|++|||.++ |..||-..+..+-++.|.+-+
T Consensus 776 GLSRvledd~~~~--ytt~GGKIPiRWTAPEAIa~--RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gy 851 (996)
T KOG0196|consen 776 GLSRVLEDDPEAA--YTTLGGKIPIRWTAPEAIAY--RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGY 851 (996)
T ss_pred cceeecccCCCcc--ccccCCccceeecChhHhhh--cccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhcc
Confidence 9999876555322 122222 256899999865 588999999999999999776 889999999888888887766
Q ss_pred CCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 248 GTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 248 g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
+-|++ .+++..+-+|+..||++|-..||++.||+.
T Consensus 852 RLPpP------------------------------mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 852 RLPPP------------------------------MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred CCCCC------------------------------CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 65543 467888999999999999999999999886
No 392
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-33 Score=291.62 Aligned_cols=261 Identities=24% Similarity=0.369 Sum_probs=204.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
++..++++||+|-||.|.++.- ..+.+||+|+++-. .+......|.+|+++|.+|+||||+.++++|+... -+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCev-eg~lkVAVK~Lr~~-a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----Pi 610 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEV-EGPLKVAVKILRPD-ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PL 610 (807)
T ss_pred hheehhhhhcCcccceeEEEEe-cCceEEEEeecCcc-cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----ch
Confidence 5678999999999999999963 44699999999743 23333478999999999999999999999997653 48
Q ss_pred EEEEecCC-ccHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 103 YVVFELME-SDLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
++|+|||+ |||.+++.++. .+.......|+.||+.|++||.+.+++||||-+.|+|++.++++||||||.++-+..+
T Consensus 611 cmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 611 CMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccC
Confidence 99999999 89999999874 3345566679999999999999999999999999999999999999999999976555
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh--CCCCCCCCChhhHHHHHHHhcCCCCHHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT--GKPLFPGKNVVHQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt--G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~ 257 (560)
..-... ...+-...|||+|.+.- .+++.++|+|+||+++||+++ ...||......+..+....++..+...
T Consensus 691 ~yy~vq-gr~vlpiRwmawEsill--gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~---- 763 (807)
T KOG1094|consen 691 DYYRVQ-GRAVLPIRWMAWESILL--GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQ---- 763 (807)
T ss_pred Cceeee-cceeeeeeehhHHHHHh--ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcc----
Confidence 432211 22355678999998755 588999999999999999765 678887665554444433333322211
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
-.....+-++..+.+||.+|+..|-++||+++++ |.+|++
T Consensus 764 -------------------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l--h~~lq~ 803 (807)
T KOG1094|consen 764 -------------------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL--HLFLQE 803 (807)
T ss_pred -------------------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH--HHHHHH
Confidence 1112234567788899999999999999999998 445543
No 393
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=260.51 Aligned_cols=208 Identities=26% Similarity=0.465 Sum_probs=170.7
Q ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHH-hcCCCCccccceeecCCCcCCCccEEE
Q 008607 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLR-LLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~-~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
.-++.||+|+||+|-+.+|..+|...|+|.+..... .....+.++|+.+.. ...+|.+|.+++.+.. ..+++|
T Consensus 49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn-~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r-----egdvwI 122 (282)
T KOG0984|consen 49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN-SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR-----EGDVWI 122 (282)
T ss_pred hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC-hHHHHHHHHhhhhhccCCCCCeEEEeehhhhc-----cccEEE
Confidence 345679999999999999999999999999975433 455677889999865 4469999999998743 357999
Q ss_pred EEecCCccHHH----HHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 105 VFELMESDLHQ----VIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 105 V~E~~~gdL~~----~i~~~~~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
.||.|..+|.. +++.++.++|..+-+|+..++.||.|||++ .|||||+||+|||||.+|++|+||||.+-.+.+.
T Consensus 123 cME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 123 CMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred eHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 99999987754 445677899999999999999999999976 8999999999999999999999999999776544
Q ss_pred CCCcccccccccCcccccccccccc--cCCCCCccchhhHHHHHHHHhhCCCCCCC-CChhhHHHHH
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAELLTGKPLFPG-KNVVHQLDIM 243 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~--~~~y~~~~DIWSlG~il~eLltG~~pF~~-~~~~~~~~~i 243 (560)
... +-..|--.|+|||.+... ...|+-++||||||+.++||.+++.||+. .+...|+..+
T Consensus 203 iAk----t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqv 265 (282)
T KOG0984|consen 203 IAK----TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQV 265 (282)
T ss_pred hHH----HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHH
Confidence 332 224577789999998432 24799999999999999999999999974 3444444443
No 394
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.98 E-value=4.7e-33 Score=290.36 Aligned_cols=199 Identities=24% Similarity=0.400 Sum_probs=173.9
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc------ChhHHHHHHHHHHHHHhcC---CCCccccceeecC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE------HVSDATRILREIKLLRLLR---HPDIVEIKHILLP 93 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~------~~~~~~~i~rEi~iL~~l~---HpnIv~l~~i~~~ 93 (560)
..|..++.+|.|+||.|++|.|+.+...|+||.|.+... ...+...+-.||.||..|+ |+||++++++|
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF-- 638 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF-- 638 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee--
Confidence 459999999999999999999999999999999875311 1122344668999999997 99999999999
Q ss_pred CCcCCCccEEEEEecCC-c-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccc
Q 008607 94 PSRREFKDIYVVFELME-S-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFG 171 (560)
Q Consensus 94 ~~~~~~~~i~lV~E~~~-g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFG 171 (560)
++..++||+||.-+ | ||+++|.....++|.+++.||+|++.|+++||+.||+|||||-+|+.++.+|-+||+|||
T Consensus 639 ---Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 639 ---EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred ---ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeecc
Confidence 55567999999987 5 999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCC
Q 008607 172 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFP 232 (560)
Q Consensus 172 la~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~ 232 (560)
.|....++. +..++||..|.|||+|+|. ...+..-|||+||++||.++....||.
T Consensus 716 saa~~ksgp-----fd~f~gtv~~aapevl~g~-~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSGP-----FDVFVGTVDYAAPEVLGGE-KYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCCC-----cceeeeeccccchhhhCCC-ccCCCcchhhhhhheeeEEEeccCCCc
Confidence 997765443 3568999999999999883 333567899999999999999988884
No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.98 E-value=4.7e-32 Score=319.95 Aligned_cols=253 Identities=24% Similarity=0.334 Sum_probs=185.0
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
..|...++||+|+||.||+|.+..+|..||||++..... ....|+++++.++|||||++++++... ...
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~~-----~~~ 758 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRSE-----KGA 758 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEcC-----CCC
Confidence 346677899999999999999999999999999864221 112468899999999999999998543 357
Q ss_pred EEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCCCCeeeCCCCcEEEecccccccccC
Q 008607 103 YVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 178 (560)
Q Consensus 103 ~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLH---s~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~ 178 (560)
|+|||||+ |+|.++++ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++..+++ ||.+.....
T Consensus 759 ~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~ 834 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT 834 (968)
T ss_pred EEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence 99999998 59999985 3899999999999999999999 6799999999999999999888776 665543221
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChh-hHHHHHHHhcCCCCHHHHHH
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVV-HQLDIMTDLLGTPSPEAIAR 257 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~-~~~~~i~~~~g~p~~~~~~~ 257 (560)
. ....+|..|+|||++.+ ..|+.++|||||||++|||++|+.||...... ..+..+.+..-.
T Consensus 835 ~-------~~~~~t~~y~aPE~~~~--~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-------- 897 (968)
T PLN00113 835 D-------TKCFISSAYVAPETRET--KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS-------- 897 (968)
T ss_pred C-------CCccccccccCcccccC--CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC--------
Confidence 1 23468899999999876 57999999999999999999999999532211 011111110000
Q ss_pred hhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 258 VRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
......+++.... ............+.+|+.+||+.||++|||+.|+++.
T Consensus 898 --~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~ 947 (968)
T PLN00113 898 --DCHLDMWIDPSIR----GDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT 947 (968)
T ss_pred --ccchhheeCcccc----CCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence 0000000000000 0000001112357789999999999999999999863
No 396
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-31 Score=273.86 Aligned_cols=268 Identities=24% Similarity=0.313 Sum_probs=199.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHh--cCCCCccccceeecCCCcCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRL--LRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~--l~HpnIv~l~~i~~~~~~~~~ 99 (560)
-.-.++.++||+|.||.||+|. -+++.||||++.. .+.+.+.+|-+|.+. ++|+||+++++.-...+.. .
T Consensus 209 l~pl~l~eli~~Grfg~V~Kaq--L~~~~VAVKifp~-----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~ 280 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQ--LDNRLVAVKIFPE-----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-R 280 (534)
T ss_pred CCchhhHHHhhcCccceeehhh--ccCceeEEEecCH-----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-c
Confidence 3456788999999999999994 5679999999863 566778888888775 4799999988765433322 4
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---------CeeeccCCCCCeeeCCCCcEEEec
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA---------NVFHRDLKPKNILANADCKLKICD 169 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~---------gIiHrDLKP~NILl~~~~~lKL~D 169 (560)
..++||++|.+ |+|.++++.+ .+++....+++..+++||+|||+- .|+|||||.+||||..|++.-|+|
T Consensus 281 ~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaD 359 (534)
T KOG3653|consen 281 MEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIAD 359 (534)
T ss_pred cceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeec
Confidence 57899999998 8999999887 699999999999999999999964 599999999999999999999999
Q ss_pred ccccccccCCCCCcccccccccCcccccccccccccCCCC-----CccchhhHHHHHHHHhhCCCCCC-CCChhhHHHHH
Q 008607 170 FGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYT-----PAIDIWSIGCIFAELLTGKPLFP-GKNVVHQLDIM 243 (560)
Q Consensus 170 FGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~-----~~~DIWSlG~il~eLltG~~pF~-~~~~~~~~~~i 243 (560)
||||.....+.+.... ...+||+.|||||+|.+- .... .++||||+|.+|+||++.-..+. +.-..-++---
T Consensus 360 FGLAl~~~p~~~~~d~-~~qVGT~RYMAPEvLEga-inl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe 437 (534)
T KOG3653|consen 360 FGLALRLEPGKPQGDT-HGQVGTRRYMAPEVLEGA-INLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE 437 (534)
T ss_pred cceeEEecCCCCCcch-hhhhhhhhhcCHHHHhhh-cccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh
Confidence 9999988765554433 348999999999999763 2222 35899999999999999765443 33222233223
Q ss_pred HHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCC--CCCHHHHHHHHHhcccCCCCCCCHHHH
Q 008607 244 TDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFP--NANPLALRLLERMLAFEPKDRPTAEEA 310 (560)
Q Consensus 244 ~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~s~~~~dLI~~mL~~DP~~Rpta~el 310 (560)
.++...|+-+.+..+ +- +++....+...|. ..-..+.+.|+.||+.|++-|.|+.=+
T Consensus 438 ~evG~hPt~e~mq~~--------VV--~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 438 AEVGNHPTLEEMQEL--------VV--RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred HHhcCCCCHHHHHHH--------HH--hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 344446665544322 11 1111111222222 223458899999999999999997654
No 397
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-30 Score=265.58 Aligned_cols=273 Identities=25% Similarity=0.364 Sum_probs=201.7
Q ss_pred ccCCCcccccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHH--hcCCCCcc
Q 008607 8 KSSADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLR--LLRHPDIV 85 (560)
Q Consensus 8 ~~~~~~~~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~--~l~HpnIv 85 (560)
-|..++.++-.-.+..+..+.+.||+|.||.||+| ...|+.||||++.. .+.....||.+|.+ .|+|+||+
T Consensus 196 GSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG--~wrGe~VAVKiF~s-----rdE~SWfrEtEIYqTvmLRHENIL 268 (513)
T KOG2052|consen 196 GSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRG--RWRGEDVAVKIFSS-----RDERSWFRETEIYQTVMLRHENIL 268 (513)
T ss_pred CCCCCchhHhHHhhhheeEEEEEecCccccceeec--cccCCceEEEEecc-----cchhhhhhHHHHHHHHHhccchhh
Confidence 45567788888888999999999999999999999 56799999999863 35566778888876 56999999
Q ss_pred ccceeecCCCcCCCccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC--------CeeeccCCCCC
Q 008607 86 EIKHILLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA--------NVFHRDLKPKN 156 (560)
Q Consensus 86 ~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~--------gIiHrDLKP~N 156 (560)
.++..-.... ....++|||++|.+ |+|++++.+ ..++.+.+.++++.++.||++||.. .|+|||||..|
T Consensus 269 gFIaaD~~~~-gs~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN 346 (513)
T KOG2052|consen 269 GFIAADNKDN-GSWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN 346 (513)
T ss_pred hhhhccccCC-CceEEEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc
Confidence 9877643222 34468999999999 899999988 4799999999999999999999954 49999999999
Q ss_pred eeeCCCCcEEEecccccccccCCCC-CcccccccccCccccccccccccc-----CCCCCccchhhHHHHHHHHhhC---
Q 008607 157 ILANADCKLKICDFGLARVAFNDTP-TAIFWTDYVATRWYRAPELCGSFF-----SKYTPAIDIWSIGCIFAELLTG--- 227 (560)
Q Consensus 157 ILl~~~~~lKL~DFGla~~~~~~~~-~~~~~~~~~gT~~Y~APEll~~~~-----~~y~~~~DIWSlG~il~eLltG--- 227 (560)
|||..++..-|+|+|||....++.. ........+||-.|||||+|...- ..| ..+||||||.++||++-.
T Consensus 347 ILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesy-k~ADIYafgLVlWEiarRc~~ 425 (513)
T KOG2052|consen 347 ILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESY-KRADIYAFGLVLWEIARRCES 425 (513)
T ss_pred EEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhh-hHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999987655532 233456789999999999986521 111 358999999999998762
Q ss_pred -------CCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCC--HHHHHHHHHhcc
Q 008607 228 -------KPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNAN--PLALRLLERMLA 298 (560)
Q Consensus 228 -------~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s--~~~~dLI~~mL~ 298 (560)
++||.+--.. .|+-+.+.++- -++.++...+ .-|...+ ..+..|++.||.
T Consensus 426 ggi~eey~~Pyyd~Vp~-----------DPs~eeMrkVV------Cv~~~RP~ip----nrW~s~~~l~~m~klMkeCW~ 484 (513)
T KOG2052|consen 426 GGIVEEYQLPYYDVVPS-----------DPSFEEMRKVV------CVQKLRPNIP----NRWKSDPALRVMAKLMKECWY 484 (513)
T ss_pred CCEehhhcCCcccCCCC-----------CCCHHHHhcce------eecccCCCCC----cccccCHHHHHHHHHHHHhhc
Confidence 4666542211 11111111110 0011111111 1111111 235678999999
Q ss_pred cCCCCCCCHHHHh
Q 008607 299 FEPKDRPTAEEAL 311 (560)
Q Consensus 299 ~DP~~Rpta~elL 311 (560)
.||.-|.||--|-
T Consensus 485 ~Np~aRltALriK 497 (513)
T KOG2052|consen 485 ANPAARLTALRIK 497 (513)
T ss_pred CCchhhhHHHHHH
Confidence 9999999986653
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=2.4e-29 Score=239.12 Aligned_cols=212 Identities=38% Similarity=0.646 Sum_probs=180.9
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME 110 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~ 110 (560)
||.|++|.||++.+..+++.+++|++....... ....+.+|+.+++.++|++|+++++++... ...++|+|++.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~-----~~~~~~~e~~~ 74 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFEDE-----NHLYLVMEYCE 74 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeecC-----CeEEEEEecCC
Confidence 689999999999998889999999987532221 346788999999999999999999988544 46899999999
Q ss_pred -ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-CCcEEEecccccccccCCCCCccccc
Q 008607 111 -SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-DCKLKICDFGLARVAFNDTPTAIFWT 187 (560)
Q Consensus 111 -gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-~~~lKL~DFGla~~~~~~~~~~~~~~ 187 (560)
++|.+++... ..+++..++.++.+++.+|++||+.|++|+||+|.||+++. ++.++|+|||.+........ ...
T Consensus 75 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---~~~ 151 (215)
T cd00180 75 GGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---LLK 151 (215)
T ss_pred CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---hhh
Confidence 6999999876 47999999999999999999999999999999999999999 89999999999976543321 123
Q ss_pred ccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHH
Q 008607 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYL 267 (560)
Q Consensus 188 ~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l 267 (560)
...+...|++||.+... ..++.+.|+|+||+++++|
T Consensus 152 ~~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l------------------------------------------- 187 (215)
T cd00180 152 TIVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL------------------------------------------- 187 (215)
T ss_pred cccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH-------------------------------------------
Confidence 45678889999998762 3678899999999999998
Q ss_pred HhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCc
Q 008607 268 SSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADP 314 (560)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp 314 (560)
..+.++|.+||..||.+||+++++++|+
T Consensus 188 -------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 -------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred -------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 1256799999999999999999999875
No 399
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-29 Score=282.60 Aligned_cols=247 Identities=28% Similarity=0.466 Sum_probs=195.5
Q ss_pred EEEEEEeecCCeEEEEEEEC----C---CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcC
Q 008607 26 KIEEVIGKGSYGVVCSAYDT----R---TGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRR 97 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~----~---tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~ 97 (560)
.+.+.||+|.||.|++|.-. . ....||||.++..... .+...+..|+++|+.+. |+||+.+++.+..
T Consensus 299 ~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~---- 373 (609)
T KOG0200|consen 299 KLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ---- 373 (609)
T ss_pred cccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc----
Confidence 67779999999999999632 1 1457999999865444 67788999999999885 9999999999855
Q ss_pred CCccEEEEEecCC-ccHHHHHHhCC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeC
Q 008607 98 EFKDIYVVFELME-SDLHQVIKAND----------------DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILAN 160 (560)
Q Consensus 98 ~~~~i~lV~E~~~-gdL~~~i~~~~----------------~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~ 160 (560)
...+++|+||+. |+|..+++.+. .++......+++||+.|++||++.+++||||-..|||+.
T Consensus 374 -~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 374 -DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred -CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 346899999998 79999998765 388999999999999999999999999999999999999
Q ss_pred CCCcEEEecccccccccCCCCCcccccccccC--cccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCC-h
Q 008607 161 ADCKLKICDFGLARVAFNDTPTAIFWTDYVAT--RWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKN-V 236 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT--~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~-~ 236 (560)
.+..+||+|||+|+.......-.. ....++ ..|||||.+.. ..|+.++||||+|++||||++ |..||++-. .
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~--~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~ 528 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFD--RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT 528 (609)
T ss_pred CCCEEEEccccceeccCCCCceEe--cCCCCccceeecCHHHhcc--CcccccchhhHHHHHHHHHhhCCCCCCCCCCcH
Confidence 999999999999986433322111 111222 33999999987 689999999999999999998 679998733 2
Q ss_pred hhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 237 VHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 237 ~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.+.++ ++....+. .....+++++-++++.|+..+|++||++.++..
T Consensus 529 ~~l~~------------------------~l~~G~r~------~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 529 EELLE------------------------FLKEGNRM------EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred HHHHH------------------------HHhcCCCC------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 22111 11211110 112356888999999999999999999999864
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97 E-value=7e-29 Score=240.64 Aligned_cols=200 Identities=38% Similarity=0.670 Sum_probs=172.6
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|.+.+.||.|++|.||++.+..+++.+++|.+...... .....+.+|+..++.++|+|++++++.+... ...++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~-----~~~~~ 74 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFEDP-----EPLYL 74 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeecC-----CceEE
Confidence 67889999999999999999999999999998753222 2567888999999999999999999987443 45899
Q ss_pred EEecCCc-cHHHHHHhCCC-CCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCC
Q 008607 105 VFELMES-DLHQVIKANDD-LTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT 182 (560)
Q Consensus 105 V~E~~~g-dL~~~i~~~~~-lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~ 182 (560)
++|++.+ +|.+++..... +++..++.++.+++.+|.+||+.+++|+||+|.||+++.++.++|+|||++.........
T Consensus 75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 75 VMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred EEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 9999997 99999988766 899999999999999999999999999999999999999999999999999876543211
Q ss_pred cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCC
Q 008607 183 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPG 233 (560)
Q Consensus 183 ~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~ 233 (560)
......++..|++||.+.+ ...++.++|+|||||++++|++|+.||.+
T Consensus 155 --~~~~~~~~~~~~~pe~~~~-~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 --LLKTVKGTPFYLAPEVLLG-GKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred --cccceeccCCcCCHhHhcC-CCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1234578889999999842 25778899999999999999999999977
No 401
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=1.4e-30 Score=300.95 Aligned_cols=208 Identities=16% Similarity=0.195 Sum_probs=148.1
Q ss_pred hcCC-CCccccceeecCCCc--CCCccEEEEEecCCccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 008607 78 LLRH-PDIVEIKHILLPPSR--REFKDIYVVFELMESDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (560)
Q Consensus 78 ~l~H-pnIv~l~~i~~~~~~--~~~~~i~lV~E~~~gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK 153 (560)
.++| .||..+++.|..... .....++++||+++++|.+++... ..+++.+++.|++||+.||.|||++||+|||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK 107 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR 107 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 3444 577777776622211 122357889999999999999753 469999999999999999999999999999999
Q ss_pred CCCeeeCC-------------------CCcEEEecccccccccCCC-------------CCcccccccccCccccccccc
Q 008607 154 PKNILANA-------------------DCKLKICDFGLARVAFNDT-------------PTAIFWTDYVATRWYRAPELC 201 (560)
Q Consensus 154 P~NILl~~-------------------~~~lKL~DFGla~~~~~~~-------------~~~~~~~~~~gT~~Y~APEll 201 (560)
|+||||+. ++.+||+|||+++...... +........+||++|+|||++
T Consensus 108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~ 187 (793)
T PLN00181 108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED 187 (793)
T ss_pred chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence 99999965 4456666666665321100 000011235789999999998
Q ss_pred ccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCC
Q 008607 202 GSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQK 281 (560)
Q Consensus 202 ~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 281 (560)
.+ ..|+.++|||||||+||||++|.+||..... .+..+... . .+ ..
T Consensus 188 ~~--~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~~~~-----------------------~---~~----~~ 233 (793)
T PLN00181 188 NG--SSSNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSLRHR-----------------------V---LP----PQ 233 (793)
T ss_pred cc--CCCCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHHHHh-----------------------h---cC----hh
Confidence 77 5789999999999999999999988753211 11111000 0 00 00
Q ss_pred CCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 282 FPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 282 ~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.....+.+.+++.+||..||.+||++.|+|+||||...
T Consensus 234 ~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 234 ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 01123556789999999999999999999999999864
No 402
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=249.61 Aligned_cols=259 Identities=27% Similarity=0.427 Sum_probs=196.8
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~ 99 (560)
..+.|.|.+.||+|.||.+.+|+|+.+...+++|.+... ......+.||...--.|. |.||+.-+++.+...
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p---~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~---- 94 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP---QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTS---- 94 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc---hhhHHHHHHHhccceeeccchhhhHHHHHHhhcC----
Confidence 356799999999999999999999999999999999864 345677889988866665 899999888765433
Q ss_pred ccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC--CCcEEEecccccccc
Q 008607 100 KDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--DCKLKICDFGLARVA 176 (560)
Q Consensus 100 ~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~--~~~lKL~DFGla~~~ 176 (560)
+.+++++||++ |||..-+..+ .+-|...+.++.||+.||.|||+.+|+|||||.+||||-. ..+|||||||+.+..
T Consensus 95 d~YvF~qE~aP~gdL~snv~~~-GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 95 DAYVFVQEFAPRGDLRSNVEAA-GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred ceEEEeeccCccchhhhhcCcc-cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 35778999999 8999988775 4889999999999999999999999999999999999743 247999999998754
Q ss_pred cCCCCCcccccccccCcccccccccccc---cCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSF---FSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~---~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
.... .-.--+..|.+||++... .-...+.+|||.||+|+|.+|||.+||......++
T Consensus 174 g~tV------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~-------------- 233 (378)
T KOG1345|consen 174 GTTV------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDK-------------- 233 (378)
T ss_pred Ccee------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCc--------------
Confidence 2211 112234568999987432 12356789999999999999999999963222111
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR---PTAEEALADPYF 316 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R---pta~elL~hp~f 316 (560)
...+++.-..++.+ .....|.-+++.+.++.++-|..++++| -++..-...-|.
T Consensus 234 --------~Y~~~~~w~~rk~~-~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 234 --------PYWEWEQWLKRKNP-ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred --------hHHHHHHHhcccCc-cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 11233333333322 4556777889999999999999999999 334433334443
No 403
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=4.5e-29 Score=268.90 Aligned_cols=247 Identities=25% Similarity=0.399 Sum_probs=198.0
Q ss_pred EEEEEEeecCCeEEEEEEECCCCc----EEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 26 KIEEVIGKGSYGVVCSAYDTRTGE----KVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~~tg~----~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
+..++||.|+||+||++...-.|+ +||||++.. +...+....+++|+-+|..|.|||+++|++++....
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------ 771 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------ 771 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------
Confidence 445789999999999998866665 578887753 344455678999999999999999999999997653
Q ss_pred EEEEEecCC-ccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 102 IYVVFELME-SDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 102 i~lV~E~~~-gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
+-||++||+ |.|.++++.+. .+-.+....|.+||++||.|||.++++||||-..||||..-..+||.|||+|+....+
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 689999999 79999998754 6889999999999999999999999999999999999999999999999999987655
Q ss_pred CCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 180 TPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 180 ~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
..... ....-..+-|+|=|.+.. ..|+.++||||+||++|||+| |..|+.+....+.-+.+.+
T Consensus 852 ~~ey~-~~~gK~pikwmale~i~~--~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~------------- 915 (1177)
T KOG1025|consen 852 EKEYS-APGGKVPIKWMALESIRI--RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEK------------- 915 (1177)
T ss_pred ccccc-ccccccCcHHHHHHHhhc--cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhc-------------
Confidence 43311 111122345778787765 689999999999999999998 8899988775443222211
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
-. + -...+.++-++--++-+||-.|+..||+++++..
T Consensus 916 -----------ge-R-----LsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 916 -----------GE-R-----LSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred -----------cc-c-----CCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 00 0 1234677888888999999999999999998764
No 404
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4.7e-29 Score=276.23 Aligned_cols=267 Identities=28% Similarity=0.352 Sum_probs=202.9
Q ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEecC---cccChhHH-HHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND---IFEHVSDA-TRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~---~~~~~~~~-~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
....++|.|++|.|+.+....-.+.++.|.... ........ ..+..|+.+-..|.|+|++..+.+++... .
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-----~ 395 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-----G 395 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-----c
Confidence 446779999999999998888788777776542 11122222 23667888888899999988877764432 2
Q ss_pred EEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC
Q 008607 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP 181 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~ 181 (560)
++-+||||++||+.++...+.++...+..++.||+.||+|||+.||.|||||++|+|++.+|.+||+|||.+.+......
T Consensus 396 ~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 396 ILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred chhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 34449999999999999988899999999999999999999999999999999999999999999999999987533322
Q ss_pred C-cccccccccCcccccccccccccCCCCC-ccchhhHHHHHHHHhhCCCCCCCCChhhHHH-HHHHhcCCCCHHHHHHh
Q 008607 182 T-AIFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIGCIFAELLTGKPLFPGKNVVHQLD-IMTDLLGTPSPEAIARV 258 (560)
Q Consensus 182 ~-~~~~~~~~gT~~Y~APEll~~~~~~y~~-~~DIWSlG~il~eLltG~~pF~~~~~~~~~~-~i~~~~g~p~~~~~~~~ 258 (560)
. .......+|+-.|+|||++.+ ..|++ ..||||.|+++..|++|+.||.-....++.. .+..
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~--~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~------------- 540 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTG--KEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY------------- 540 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccc--cccCcchhhhhhccceEEEEecCCCccccccccccchhhhcc-------------
Confidence 1 233467899999999999977 57776 5799999999999999999997544332210 0000
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKV 322 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~~~ 322 (560)
....+........+..++...+.+|.+||+.||.+|.|+++|++.+||+.+...
T Consensus 541 ----------~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c 594 (601)
T KOG0590|consen 541 ----------SDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECC 594 (601)
T ss_pred ----------ccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceE
Confidence 000111111222233456678899999999999999999999999999976543
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=2e-27 Score=223.68 Aligned_cols=165 Identities=22% Similarity=0.276 Sum_probs=127.2
Q ss_pred ccHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCccccccc
Q 008607 111 SDLHQVIKAN-DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDY 189 (560)
Q Consensus 111 gdL~~~i~~~-~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~ 189 (560)
|+|.+++..+ ..++++.++.|+.||+.||+|||+.+ ||+|||++.++.+|+ ||+++..... ..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~--------~~ 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE--------QS 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc--------cC
Confidence 6899999874 45999999999999999999999998 999999999999999 9998765332 23
Q ss_pred ccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhH-HHHHHHhcCCCCHHHHHHhhhHHHHHHHH
Q 008607 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQ-LDIMTDLLGTPSPEAIARVRNEKARRYLS 268 (560)
Q Consensus 190 ~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~-~~~i~~~~g~p~~~~~~~~~~~~~~~~l~ 268 (560)
.||+.|+|||++.+ ..|+.++|||||||++|||++|+.||........ +..+..
T Consensus 65 ~g~~~y~aPE~~~~--~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~----------------------- 119 (176)
T smart00750 65 RVDPYFMAPEVIQG--QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN----------------------- 119 (176)
T ss_pred CCcccccChHHhcC--CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH-----------------------
Confidence 68999999999977 5789999999999999999999999976543221 111111
Q ss_pred hhccCCCCCCCCCCCCCCH--HHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 269 SMRKKKPIPFSQKFPNANP--LALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 269 ~~~~~~~~~~~~~~~~~s~--~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
.+....+.. ......++. .+.+||.+||..||.+||++.|+++|+|+.
T Consensus 120 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 120 GMPADDPRD-RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred HhccCCccc-cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 111000000 000111222 589999999999999999999999999975
No 406
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94 E-value=3.8e-25 Score=222.28 Aligned_cols=265 Identities=34% Similarity=0.524 Sum_probs=204.5
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChh-HHHHHHHHHHHHHhcCCC-CccccceeecCCCcCCCccE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVS-DATRILREIKLLRLLRHP-DIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~-~~~~i~rEi~iL~~l~Hp-nIv~l~~i~~~~~~~~~~~i 102 (560)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +|+.+++.+.... ..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-----SL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-----EE
Confidence 889999999999999999887 8899999986554443 567889999999999988 7999999983332 37
Q ss_pred EEEEecCCc-cHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-cEEEeccccccccc
Q 008607 103 YVVFELMES-DLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-KLKICDFGLARVAF 177 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~---~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-~lKL~DFGla~~~~ 177 (560)
+++++++.+ ++.+++.... .+++..+..++.|++.+|.|+|+.+++||||||+|||++..+ .++++|||+++...
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 999999995 7887777664 799999999999999999999999999999999999999998 79999999998543
Q ss_pred CCCCCc---ccccccccCccccccccccccc-CCCCCccchhhHHHHHHHHhhCCCCCCCCCh---hhHHHHHHHhcCCC
Q 008607 178 NDTPTA---IFWTDYVATRWYRAPELCGSFF-SKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---VHQLDIMTDLLGTP 250 (560)
Q Consensus 178 ~~~~~~---~~~~~~~gT~~Y~APEll~~~~-~~y~~~~DIWSlG~il~eLltG~~pF~~~~~---~~~~~~i~~~~g~p 250 (560)
...... ......+||.+|+|||.+.+.. ..+....|+||+|++++++++|..||..... ......+......+
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence 332221 1346789999999999987621 3677899999999999999999999887664 22222222111111
Q ss_pred CHHHHHHhhhHHHHHHHHhhccCCCCCCCCCC-CCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 251 SPEAIARVRNEKARRYLSSMRKKKPIPFSQKF-PNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.......... ......+.+++.+|+..+|..|.+..+...++|....
T Consensus 234 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~ 281 (384)
T COG0515 234 ----------------------SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL 281 (384)
T ss_pred ----------------------ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence 0000000000 1123578899999999999999999999988666543
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93 E-value=2.4e-25 Score=232.55 Aligned_cols=168 Identities=21% Similarity=0.227 Sum_probs=129.5
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECC-CCcEEEEEEecCccc---ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFE---HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~-tg~~vAiK~i~~~~~---~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
...+|++.+.||+|+||+||+|++.. ++..||||++..... .......+.+|+++|+.++|+||+..+..+
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----- 90 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----- 90 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-----
Confidence 35679999999999999999999886 778889998753211 222355688999999999999998533221
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC-CCCCeeeCCCCcEEEecccccc
Q 008607 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL-KPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDL-KP~NILl~~~~~lKL~DFGla~ 174 (560)
...|||||||+| +|. .+... . ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+
T Consensus 91 ---~~~~LVmE~~~G~~L~-~~~~~---~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~ 160 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLH-LARPH---G---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS 160 (365)
T ss_pred ---CCcEEEEEccCCCCHH-HhCcc---c---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence 236999999986 665 22211 1 1568899999999999999999999 9999999999999999999998
Q ss_pred cccCCCCCcc-----cccccccCccccccccccc
Q 008607 175 VAFNDTPTAI-----FWTDYVATRWYRAPELCGS 203 (560)
Q Consensus 175 ~~~~~~~~~~-----~~~~~~gT~~Y~APEll~~ 203 (560)
.......... ..+..++++.|+|||.+..
T Consensus 161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred ecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 7643321111 1245678899999999854
No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.92 E-value=5.5e-24 Score=220.88 Aligned_cols=255 Identities=21% Similarity=0.230 Sum_probs=188.3
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCC-cEEEEEEecCcccChhHHHHHHHHHHHHHhcCC----CCccccceeecCCCcCC
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTG-EKVAIKKINDIFEHVSDATRILREIKLLRLLRH----PDIVEIKHILLPPSRRE 98 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg-~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~H----pnIv~l~~i~~~~~~~~ 98 (560)
+|++.+.||+|+||.||+|.+..++ ..+|+|......... ...+..|+.+|..+.. .++..+++... ..
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~--~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~ 92 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSK--PSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----ST 92 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCC--CccchhHHHHHHHHhhhcCCCCCCEEEEecc----CC
Confidence 8999999999999999999998875 678888765422111 1256789999988873 57777777663 12
Q ss_pred CccEEEEEecCCccHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-----CcEEEeccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-----CKLKICDFG 171 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-----~~lKL~DFG 171 (560)
...-||||++++.+|.++.+.. +.|+...+..++.|++.+|++||+.|++||||||+|+++... ..+.|.|||
T Consensus 93 ~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 93 EDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred CceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 2357999999999999988654 479999999999999999999999999999999999999865 469999999
Q ss_pred ccc--cccCCCCC-----cccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHH
Q 008607 172 LAR--VAFNDTPT-----AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMT 244 (560)
Q Consensus 172 la~--~~~~~~~~-----~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~ 244 (560)
+++ ........ ........||..|+++....+ ...+.+.|+||++.++.+|+.|..||.+.........+.
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~--~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG--IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCC--CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 998 32222111 011134569999999999887 577899999999999999999999997655433222221
Q ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 245 ~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
... ..... .......+..+..++..+-..+...+|....+..
T Consensus 251 ~~~-----------------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 251 KDP-----------------------RKLLT---DRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred HHh-----------------------hhhcc---ccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 100 00000 0011223455666777666788888998887755
No 409
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=1e-24 Score=219.31 Aligned_cols=253 Identities=18% Similarity=0.317 Sum_probs=196.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCC-----CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRT-----GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~t-----g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
..|+++..++-+|.||.||.|+.... .+.|.+|.++.. ...-....++.|..+|..+.|||+..+.++...
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~-AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie--- 358 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQH-ASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE--- 358 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhc-ccHHHHHHHHHHHHHHhcCcCCCccceeEEEee---
Confidence 35688889999999999999965533 234666766532 233455678899999999999999999998754
Q ss_pred CCCccEEEEEecCC-ccHHHHHHhC--------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEE
Q 008607 97 REFKDIYVVFELME-SDLHQVIKAN--------DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKI 167 (560)
Q Consensus 97 ~~~~~i~lV~E~~~-gdL~~~i~~~--------~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL 167 (560)
+...-++++.+++ |+|..++... +.++..+...++.||..|++|||+.||+|.||-..|.+|++.-++||
T Consensus 359 -~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 359 -DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred -ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEe
Confidence 3345688889998 7999998721 24777888899999999999999999999999999999999999999
Q ss_pred ecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHh
Q 008607 168 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDL 246 (560)
Q Consensus 168 ~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~ 246 (560)
+|=.|+|..+..+.....-. .-....||+||.+.. ..|+.++|+|||||+||||+| |+.|+..-+..+..
T Consensus 438 tDsaLSRDLFP~DYhcLGDn-EnRPvkWMslEal~n--~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~------ 508 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHCLGDN-ENRPVKWMSLEALQN--SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME------ 508 (563)
T ss_pred ccchhccccCcccccccCCC-CCCcccccCHHHHhh--hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH------
Confidence 99999998877665432111 123456899999977 689999999999999999998 78888665544332
Q ss_pred cCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhc
Q 008607 247 LGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALA 312 (560)
Q Consensus 247 ~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~ 312 (560)
.|++.-.+ + ...-++++++..++.-||..+|++||+.+|+..
T Consensus 509 ------------------~ylkdGyR-----l-aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 509 ------------------HYLKDGYR-----L-AQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred ------------------HHHhccce-----e-cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 23322111 0 112378899999999999999999999999864
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=1.9e-23 Score=198.64 Aligned_cols=214 Identities=26% Similarity=0.355 Sum_probs=168.8
Q ss_pred cccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCC-CCccccceeecCCC
Q 008607 17 TEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH-PDIVEIKHILLPPS 95 (560)
Q Consensus 17 ~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~H-pnIv~l~~i~~~~~ 95 (560)
.++-.+..|+++++||.|+||.+|+|....+|+.||||.-... .....+..|.++.+.|++ ..|..+....
T Consensus 9 ~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~----a~hpqL~yEskvY~iL~~g~GiP~i~~y~---- 80 (341)
T KOG1163|consen 9 EELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK----AKHPQLLYESKVYRILQGGVGIPHIRHYG---- 80 (341)
T ss_pred hhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc----CCCcchhHHHHHHHHhccCCCCchhhhhc----
Confidence 3457789999999999999999999999999999999986532 223456789999999985 5565555544
Q ss_pred cCCCccEEEEEecCCccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC---CcEEEeccc
Q 008607 96 RREFKDIYVVFELMESDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD---CKLKICDFG 171 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~---~~lKL~DFG 171 (560)
.+..+-.+||++++.+|.+++.- +..|+...+.-++-|++.-|+|+|..+++||||||+|+|..-+ ..+.|+|||
T Consensus 81 -~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 81 -TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred -cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEecc
Confidence 22345689999999888887764 3469999999999999999999999999999999999996543 459999999
Q ss_pred ccccccCCCCCc-c---cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHH
Q 008607 172 LARVAFNDTPTA-I---FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLD 241 (560)
Q Consensus 172 la~~~~~~~~~~-~---~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~ 241 (560)
||+.+....... + .-....||..|++--...+ ..-+...|+-|+|.+|..+.-|..||.|-......+
T Consensus 160 LaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g--~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~Q 231 (341)
T KOG1163|consen 160 LAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG--IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQ 231 (341)
T ss_pred chhhhccccccccCccccCCccceeeeehhhhhhhh--hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHH
Confidence 998764332211 1 1245679999998776655 355678999999999999999999999876554433
No 411
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.90 E-value=5.2e-25 Score=234.43 Aligned_cols=242 Identities=25% Similarity=0.396 Sum_probs=197.7
Q ss_pred EEeecCCeEEEEEEE---CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEEE
Q 008607 30 VIGKGSYGVVCSAYD---TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d---~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~lV 105 (560)
++|.|+||.|++++. ...|..+|+|+.++.........+...|-.++..++ ||.+|+++..+.+.+ .+|++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-----kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-----KLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-----chhHh
Confidence 379999999998753 356778999998865444444445567889999997 999999999886554 58999
Q ss_pred EecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcc
Q 008607 106 FELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAI 184 (560)
Q Consensus 106 ~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~ 184 (560)
+++..| +|...+.....+.+...+.+...++.|++++|+.+|+|||+|++||+++.+|.+|+.|||+++......
T Consensus 76 ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~---- 151 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEK---- 151 (612)
T ss_pred hhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhh----
Confidence 999985 999999888889999999999999999999999999999999999999999999999999998653322
Q ss_pred cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHH
Q 008607 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKAR 264 (560)
Q Consensus 185 ~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~ 264 (560)
..|||..|||||++. ....++|.||+|+++|+|++|..||.+ +....|.+.
T Consensus 152 ---~~cgt~eymApEI~~----gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~------------------ 202 (612)
T KOG0603|consen 152 ---IACGTYEYRAPEIIN----GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA------------------ 202 (612)
T ss_pred ---hcccchhhhhhHhhh----ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh------------------
Confidence 228999999999986 356899999999999999999999977 333333220
Q ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCC-----HHHHhcCccccccccc
Q 008607 265 RYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPT-----AEEALADPYFKGLAKV 322 (560)
Q Consensus 265 ~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpt-----a~elL~hp~f~~~~~~ 322 (560)
+ ......++..+.+++..|+..+|..|.. +.|+++|+||..+...
T Consensus 203 --------~-----~~~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~ 252 (612)
T KOG0603|consen 203 --------E-----LEMPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWN 252 (612)
T ss_pred --------c-----cCCchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHh
Confidence 0 0112355778999999999999999964 5899999999876543
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=6.9e-23 Score=202.77 Aligned_cols=241 Identities=22% Similarity=0.314 Sum_probs=184.4
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~ 98 (560)
.+|-.|+|.++||+|+||+.+.+.+.-+++.||||.-.. .+++.++..|....+.|. .++|..++-+- .+
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr----kS~APQLrdEYr~YKlL~g~~GIP~vYYFG-----qe 95 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR----KSEAPQLRDEYRTYKLLGGTEGIPQVYYFG-----QE 95 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccc----cCCcchHHHHHHHHHHHcCCCCCCceeeec-----cc
Confidence 467789999999999999999999999999999997543 355667788999998886 67777765433 23
Q ss_pred CccEEEEEecCCccHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC-----cEEEecccc
Q 008607 99 FKDIYVVFELMESDLHQVIKAND-DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC-----KLKICDFGL 172 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~-~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~-----~lKL~DFGl 172 (560)
..+-.||+|+++.+|.+++.-.+ +|+...+..++.|++.-++|+|++++|.|||||+|+||..-+ .|.|+|||+
T Consensus 96 G~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGm 175 (449)
T KOG1165|consen 96 GKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGM 175 (449)
T ss_pred cchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccc
Confidence 34568999999988888887654 699999999999999999999999999999999999997643 499999999
Q ss_pred cccccCCCCC-cc---cccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCCh---hhHHHHHHH
Q 008607 173 ARVAFNDTPT-AI---FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNV---VHQLDIMTD 245 (560)
Q Consensus 173 a~~~~~~~~~-~~---~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~---~~~~~~i~~ 245 (560)
|+.+..-... .+ ...+..||-.||+=-...+ ..-+...|+-|||-+|...|-|.+||.|... -+.+++|-+
T Consensus 176 AK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG--rEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe 253 (449)
T KOG1165|consen 176 AKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG--REQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGE 253 (449)
T ss_pred hhhhcCccccccCccccccccccceeeeEeecccc--chhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcc
Confidence 9976432221 11 1245689999999887766 4667889999999999999999999998543 344445544
Q ss_pred hcCCCCHHHHHHhhhHHHHHHHHhhc
Q 008607 246 LLGTPSPEAIARVRNEKARRYLSSMR 271 (560)
Q Consensus 246 ~~g~p~~~~~~~~~~~~~~~~l~~~~ 271 (560)
.-..-+.+.+..--.++...|+.-.+
T Consensus 254 ~Kr~T~i~~Lc~g~P~efa~Yl~yvR 279 (449)
T KOG1165|consen 254 TKRSTPIEVLCEGFPEEFATYLRYVR 279 (449)
T ss_pred ccccCCHHHHHhcCHHHHHHHHHHHH
Confidence 33333333333333444555555443
No 413
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.90 E-value=1.3e-23 Score=233.32 Aligned_cols=230 Identities=27% Similarity=0.412 Sum_probs=175.2
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCC
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~ 99 (560)
...+.|..++.|..|+||-||+++|+.+..++|+ +|++. + -+ || ||..+-+
T Consensus 80 p~e~df~~IklisngAygavylvrh~~trqrfa~-kiNkq-----~--li------lR-----nilt~a~---------- 130 (1205)
T KOG0606|consen 80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQ-----N--LI------LR-----NILTFAG---------- 130 (1205)
T ss_pred CCccccceeEeeccCCCCceeeeeccccccchhh-ccccc-----c--hh------hh-----ccccccC----------
Confidence 3456789999999999999999999999999999 55431 1 11 11 1222111
Q ss_pred ccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..++| ||-...++..+.++.+. +.+++|||+.||+|||+||+|+||+.-|++|+.|||+...-...
T Consensus 131 -npfvv-----gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 131 -NPFVV-----GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -Cccee-----chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 12333 66666676666666554 78899999999999999999999999999999999999763222
Q ss_pred CCCc------------ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhc
Q 008607 180 TPTA------------IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLL 247 (560)
Q Consensus 180 ~~~~------------~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~ 247 (560)
.... ..-...|||+.|+|||++.. ..|+..+|.|++|+|+||.+-|..||.|....+.+..+..-
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr--qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd- 273 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD- 273 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhh--hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh-
Confidence 1111 11234699999999999876 68999999999999999999999999998877766544321
Q ss_pred CCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC---CCHHHHhcCccccccccc
Q 008607 248 GTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR---PTAEEALADPYFKGLAKV 322 (560)
Q Consensus 248 g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R---pta~elL~hp~f~~~~~~ 322 (560)
.+.|.+.-....++++++|.++|+.+|..| ..+-++.+|+||+.+...
T Consensus 274 ---------------------------~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 274 ---------------------------DIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred ---------------------------hccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 122344445678999999999999999999 457788899999987543
No 414
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.89 E-value=6.7e-23 Score=206.07 Aligned_cols=240 Identities=21% Similarity=0.276 Sum_probs=154.2
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc-cChhHHHHHHHHHHHHHhcCC----------CCccccceeec
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF-EHVSDATRILREIKLLRLLRH----------PDIVEIKHILL 92 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~~~i~rEi~iL~~l~H----------pnIv~l~~i~~ 92 (560)
.+...+.||.|+++.||.+.|..||+.+|+|++.... ......+.+.+|.-....+.+ -.++-.+++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 5678899999999999999999999999999975322 222344556666544444322 12222223221
Q ss_pred CCCc---------CCC---ccEEEEEecCCccHHHHHHh---CCC----CCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Q 008607 93 PPSR---------REF---KDIYVVFELMESDLHQVIKA---NDD----LTPEHYQFFLYQLLRGLKYIHTANVFHRDLK 153 (560)
Q Consensus 93 ~~~~---------~~~---~~i~lV~E~~~gdL~~~i~~---~~~----lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK 153 (560)
.... ... -+.+++|+-+.+||.+++.. ... +.......+..|+++.+++||+.||+|+|||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 1100 000 13478899999998888653 221 2233345566999999999999999999999
Q ss_pred CCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccc------cCCCCCccchhhHHHHHHHHhhC
Q 008607 154 PKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF------FSKYTPAIDIWSIGCIFAELLTG 227 (560)
Q Consensus 154 P~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~------~~~y~~~~DIWSlG~il~eLltG 227 (560)
|+|+|++.+|.++|+||+......... .....+..|.+||+.... ...++.+.|.|+||+++|.|+||
T Consensus 173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~------~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~ 246 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFSSLVRAGTRY------RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCG 246 (288)
T ss_dssp GGGEEE-TTS-EEE--GGGEEETTEEE------EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHS
T ss_pred eeeEEEcCCCCEEEcChHHHeecCcee------eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHc
Confidence 999999999999999999776542211 113455779999976431 13478899999999999999999
Q ss_pred CCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 008607 228 KPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304 (560)
Q Consensus 228 ~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R 304 (560)
..||........ ....|..|. +++..+++||+.||+.||.+|
T Consensus 247 ~lPf~~~~~~~~----------------------------------~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 247 RLPFGLSSPEAD----------------------------------PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp S-STCCCGGGST----------------------------------SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred cCCCCCCCcccc----------------------------------ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999975442110 001355666 888999999999999999988
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-23 Score=233.35 Aligned_cols=252 Identities=27% Similarity=0.396 Sum_probs=184.0
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc--cChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCcc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF--EHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKD 101 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~--~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~ 101 (560)
.|...+.||++.|=.|++|.|. .| .|+||++-+.. ..-....+.++|++ ...+++||.+.+..+..+ .+.
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t-----~kA 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EG-LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVT-----DKA 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cc-eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHh-----hHH
Confidence 7999999999999999999764 34 49999886432 12223344456666 677899999998776533 245
Q ss_pred EEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc--cCC
Q 008607 102 IYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA--FND 179 (560)
Q Consensus 102 i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~--~~~ 179 (560)
-|||-+|...+|++.+..+.-+..-+.+.|+.||+.||.-+|..||+|||||.+||||+.=+-+.|+||..-+.. ..+
T Consensus 96 AylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 96 AYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 799999999999999988888889999999999999999999999999999999999999989999999765532 222
Q ss_pred CCCc--ccccccccCcccccccccccc---------cCCCCCccchhhHHHHHHHHhh-CCCCCCCCChhhHHHHHHHhc
Q 008607 180 TPTA--IFWTDYVATRWYRAPELCGSF---------FSKYTPAIDIWSIGCIFAELLT-GKPLFPGKNVVHQLDIMTDLL 247 (560)
Q Consensus 180 ~~~~--~~~~~~~gT~~Y~APEll~~~---------~~~y~~~~DIWSlG~il~eLlt-G~~pF~~~~~~~~~~~i~~~~ 247 (560)
.+.. .++.+...-.+|.|||.+... ....+++-||||+||+++||++ |++||.- .|+-....
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~-- 249 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRS-- 249 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhc--
Confidence 2221 223333344579999987431 0125678999999999999988 6899942 11111100
Q ss_pred CCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 248 GTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 248 g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
| ........++.+. +...+.||..|++.||.+|.+|++.|+.
T Consensus 250 ~----------~~~~~e~~Le~Ie--------------d~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 250 G----------NADDPEQLLEKIE--------------DVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred c----------CccCHHHHHHhCc--------------CccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0 0011122222221 3357899999999999999999999975
No 416
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=1.1e-22 Score=195.19 Aligned_cols=140 Identities=24% Similarity=0.256 Sum_probs=109.0
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhH------------------------HHHHHHHHHHHHhcCCCC
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD------------------------ATRILREIKLLRLLRHPD 83 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~------------------------~~~i~rEi~iL~~l~Hpn 83 (560)
.+.||+|+||.||+|.+. +|+.||||+++........ .....+|+++|..+.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999987 8999999999743211111 112345999999998877
Q ss_pred ccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCeeeccCCCCCeeeCC
Q 008607 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLKPKNILANA 161 (560)
Q Consensus 84 Iv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yL-Hs~gIiHrDLKP~NILl~~ 161 (560)
+.....+.. ...+|||||++| ++...+.....+++..+..++.||+.+|.+| |+.||+||||||+|||++
T Consensus 81 v~~p~~~~~-------~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~- 152 (190)
T cd05147 81 IPCPEPILL-------KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH- 152 (190)
T ss_pred CCCCcEEEe-------cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-
Confidence 744332221 123899999996 4555444556799999999999999999999 799999999999999998
Q ss_pred CCcEEEecccccccc
Q 008607 162 DCKLKICDFGLARVA 176 (560)
Q Consensus 162 ~~~lKL~DFGla~~~ 176 (560)
++.++|+|||+|...
T Consensus 153 ~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 DGKLYIIDVSQSVEH 167 (190)
T ss_pred CCcEEEEEccccccC
Confidence 578999999999653
No 417
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.87 E-value=2.8e-22 Score=195.92 Aligned_cols=176 Identities=13% Similarity=0.139 Sum_probs=132.2
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhH-HHH------HHHHHHHHHhcCCCCccccceeecCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-ATR------ILREIKLLRLLRHPDIVEIKHILLPP 94 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~-~~~------i~rEi~iL~~l~HpnIv~l~~i~~~~ 94 (560)
.++|++.++||.|+||.||++.+ ++..+|||.+......... ..+ +.+|+..+..+.|++|..+.+.+...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 68999999999999999999754 4778999999754332222 223 57899999999999999998886543
Q ss_pred CcCC---CccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecc
Q 008607 95 SRRE---FKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (560)
Q Consensus 95 ~~~~---~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DF 170 (560)
.... ....+|||||++| +|.++. .++++ .+.+|+.+|..||..||+||||||+||+++.+| ++|+||
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDf 178 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDL 178 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEEC
Confidence 2211 2357999999997 787763 23332 466999999999999999999999999999998 999999
Q ss_pred cccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHh
Q 008607 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELL 225 (560)
Q Consensus 171 Gla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLl 225 (560)
|..+........ -.+... ..|+.++|+||||+++..+.
T Consensus 179 g~~~~~~e~~a~---------------d~~vle--r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 179 SGKRCTAQRKAK---------------DRIDLE--RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCcccccchhhH---------------HHHHHH--hHhcccccccceeEeehHHH
Confidence 988654211100 002222 34667899999999987654
No 418
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87 E-value=1.5e-21 Score=187.27 Aligned_cols=141 Identities=24% Similarity=0.228 Sum_probs=111.3
Q ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhH------------------------HHHHHHHHHHHHhcCCC
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD------------------------ATRILREIKLLRLLRHP 82 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~------------------------~~~i~rEi~iL~~l~Hp 82 (560)
+.+.||+|++|.||+|.+. +|+.||||+++........ ...+.+|+..+..+.|+
T Consensus 1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 79 (190)
T cd05145 1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA 79 (190)
T ss_pred CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999999987 8999999998753211000 12245799999999999
Q ss_pred CccccceeecCCCcCCCccEEEEEecCCcc-HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeC
Q 008607 83 DIVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILAN 160 (560)
Q Consensus 83 nIv~l~~i~~~~~~~~~~~i~lV~E~~~gd-L~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~ 160 (560)
++.....+... ..||||||++|. +.........+++..+..++.|++.+|.+||+ .||+||||||+|||++
T Consensus 80 ~i~~p~~~~~~-------~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~ 152 (190)
T cd05145 80 GVPVPEPILLK-------KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH 152 (190)
T ss_pred CCCCceEEEec-------CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE
Confidence 87554444321 138999999973 43333344578899999999999999999999 9999999999999999
Q ss_pred CCCcEEEecccccccc
Q 008607 161 ADCKLKICDFGLARVA 176 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~ 176 (560)
++.++|+|||+++..
T Consensus 153 -~~~~~liDFG~a~~~ 167 (190)
T cd05145 153 -DGKPYIIDVSQAVEL 167 (190)
T ss_pred -CCCEEEEEcccceec
Confidence 889999999999764
No 419
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-21 Score=196.91 Aligned_cols=255 Identities=27% Similarity=0.368 Sum_probs=173.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCC-----------------------------------cEEEEEEecCcccChhHHH
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTG-----------------------------------EKVAIKKINDIFEHVSDAT 67 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg-----------------------------------~~vAiK~i~~~~~~~~~~~ 67 (560)
+.|+|.+.||+|....||.|+-...| -..|||.+-+. +..+...
T Consensus 157 ddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~-~~~s~~~ 235 (598)
T KOG4158|consen 157 DDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNF-EHDSGDA 235 (598)
T ss_pred hhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhccc-ccCCchH
Confidence 46999999999999999998643211 02466665432 2223333
Q ss_pred HHHH----HH------HH--------HHh--------cCCCCccccceeecCCC----------------------cCCC
Q 008607 68 RILR----EI------KL--------LRL--------LRHPDIVEIKHILLPPS----------------------RREF 99 (560)
Q Consensus 68 ~i~r----Ei------~i--------L~~--------l~HpnIv~l~~i~~~~~----------------------~~~~ 99 (560)
.|++ |+ .+ .+. -+|||||.+...|.+.- ..+.
T Consensus 236 ~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~ 315 (598)
T KOG4158|consen 236 HILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEP 315 (598)
T ss_pred HHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCC
Confidence 3332 21 11 111 25999999998874321 1234
Q ss_pred ccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC--CC--cEEEeccccccc
Q 008607 100 KDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA--DC--KLKICDFGLARV 175 (560)
Q Consensus 100 ~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~--~~--~lKL~DFGla~~ 175 (560)
..+|+||..+..+|.+++-.+ ..+.....-++.|+++|+.|||.+||.|||||.+|||+.- |+ .+.|+|||++-.
T Consensus 316 ~tlylvMkrY~~tLr~yl~~~-~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLA 394 (598)
T KOG4158|consen 316 KTLYLVMKRYRQTLREYLWTR-HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLA 394 (598)
T ss_pred ceEEEehhcchhhHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeee
Confidence 569999999999999999776 4677778889999999999999999999999999999753 33 389999998754
Q ss_pred ccCCCCCccc---ccccccCcccccccccccccCC---C-CCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcC
Q 008607 176 AFNDTPTAIF---WTDYVATRWYRAPELCGSFFSK---Y-TPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLG 248 (560)
Q Consensus 176 ~~~~~~~~~~---~~~~~gT~~Y~APEll~~~~~~---y-~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g 248 (560)
..+..-...+ .-+.-|.-..||||+....-.+ . -.++|.|+.|.+.||++....||.+......
T Consensus 395 d~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L--------- 465 (598)
T KOG4158|consen 395 DDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLL--------- 465 (598)
T ss_pred ccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchhee---------
Confidence 3221111111 1234567788999987532111 1 1378999999999999999999976432110
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE 308 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~ 308 (560)
+.+.|-+ ..+......+++.+++|+..+|+.||++|+++.
T Consensus 466 -------------~~r~Yqe-------~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 466 -------------DTRTYQE-------SQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred -------------chhhhhh-------hhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 0011111 112233356789999999999999999999843
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=2e-20 Score=179.62 Aligned_cols=192 Identities=17% Similarity=0.038 Sum_probs=137.1
Q ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccC--hhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccE
Q 008607 26 KIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEH--VSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~--~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.+...|++|+||+|+.+.. .+.+++.+.+.....- ......+.+|+++|+.|. |++|..+++.. ..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~---------~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD---------GR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------CE
Confidence 4578899999999998843 6788887777532221 112235789999999996 57788887741 36
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccC-CCCCeeeCCCCcEEEecccccccccCCC
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDL-KPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDL-KP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
|++|||+.| +|.+.+.. . ...++.|++.+|++||++||+|||| ||+|||++.++.++|+|||+|.......
T Consensus 74 ~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~ 146 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRA 146 (218)
T ss_pred EEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcc
Confidence 999999997 56544321 1 1357899999999999999999999 7999999999999999999998543222
Q ss_pred CC----c-cc-----ccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCC
Q 008607 181 PT----A-IF-----WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKN 235 (560)
Q Consensus 181 ~~----~-~~-----~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~ 235 (560)
.. . .. ..-...++.|++|+.-.-....--...+.++.|+.+|.++|++.++-+.+
T Consensus 147 ~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 147 RWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 10 0 00 00122567788887543211122256788899999999999998875543
No 421
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.83 E-value=1.4e-20 Score=200.50 Aligned_cols=309 Identities=22% Similarity=0.253 Sum_probs=207.9
Q ss_pred HHhcCCCCccccceeecCCCcCCCccEEEEEecCC-ccHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhCCe-eeccC
Q 008607 76 LRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKA-NDDLTPEHYQFFLYQLLRGLKYIHTANV-FHRDL 152 (560)
Q Consensus 76 L~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~-~~~lse~~~~~i~~Qll~aL~yLHs~gI-iHrDL 152 (560)
|+.+.|.|+.+++++++.. ..+++|.+||. |+|.+.+.. ...+++-....+++.|+.||.|||..-| .|+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeee
Confidence 4678999999999999765 46899999998 799999987 3468888999999999999999999877 99999
Q ss_pred CCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccc--cCC---CCCccchhhHHHHHHHHhhC
Q 008607 153 KPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSF--FSK---YTPAIDIWSIGCIFAELLTG 227 (560)
Q Consensus 153 KP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~--~~~---y~~~~DIWSlG~il~eLltG 227 (560)
+..|.++|..+.+||.|||+........ .........-...|.|||++.+. ... .+.+.||||+|+|++|+++.
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~-~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETA-EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccc-cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 9999999999999999999998764311 10111222244568999998662 111 46679999999999999999
Q ss_pred CCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCH
Q 008607 228 KPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTA 307 (560)
Q Consensus 228 ~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta 307 (560)
+.||........-+.+.. . +.........+.-.......+.+..++++|+.-+|..||++
T Consensus 155 ~~~~~~~~~~~~~~eii~-----------~---------~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~ 214 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIIL-----------R---------VKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI 214 (484)
T ss_pred cCccccccccCChHHHHH-----------H---------HHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence 999986432221111110 0 11111111111111112455679999999999999999999
Q ss_pred HHHhcCcccccccccCCCCCC-CCCCcchhhHHhhcCCHHHHHHHHHHHHHhhChhHHHhhhcCCCCCCCCCCchhHHHH
Q 008607 308 EEALADPYFKGLAKVEREPSA-QPVTKMEFEFERRRITKEDVRELIYREILEYHPQMLKEFLEGSEPTGFMYPSAVDHFK 386 (560)
Q Consensus 308 ~elL~hp~f~~~~~~~~~~~~-~~~~~~~~~~e~~~~~~e~~~e~i~~ei~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (560)
+++-.. +..+..... .. ..+..+-...+......|+ .+.+...++..+..+......-|.|..|+
T Consensus 215 ~~i~~~--~~~~~~~~~--~~~nl~D~m~~~le~Y~~nLe~-------~v~eRt~~l~~e~~k~d~LL~~mLP~~VA--- 280 (484)
T KOG1023|consen 215 EQIRSK--LLTINKGGS--SKGNLMDSLFRMLESYADNLEK-------LVDERTAELEEEKKKTDTLLGQMLPKSVA--- 280 (484)
T ss_pred HHHHhh--hhhhccccc--ccchhHHHHHHHHHHHHhhhHH-------HHHHHHHHHHHHHHHHHHHHHHhcCHHHh---
Confidence 987431 111111000 00 1111111222222333333 23333333344444444555567787776
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCCCCCCccccccCCCCCCCcccc
Q 008607 387 KQFAYLEEHYGKGTTVAPPERQHASLPRPCVLYSDKTVQNSAAVT 431 (560)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (560)
+..+.|..+.|.....+.+..++++.++.+..+++|-.
T Consensus 281 -------~~lk~G~~v~pe~~~~vti~fsDiv~fT~l~~~~~P~~ 318 (484)
T KOG1023|consen 281 -------ESLKLGKTVDPESFDSVTIYFSDIVGFTVLSSNSTPIQ 318 (484)
T ss_pred -------hHhhcCCcCCccccCceeeeeHHHHHHHHHHhcCCCce
Confidence 67888999999999999999999999998888776654
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.83 E-value=6.1e-20 Score=178.37 Aligned_cols=136 Identities=20% Similarity=0.244 Sum_probs=107.3
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-----CCCCccccceeecCCCcCCCccE
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-----RHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-----~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
.+.||+|+||.||. |..++.. +||++... .......+.+|+.+++.+ .||||+++++++.+.. ....+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~--~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~--g~g~v 79 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHR--GDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDC--GTGYV 79 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEecc--ccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCC--CCeEE
Confidence 46899999999995 7777776 69988642 223456789999999999 5799999999996642 11344
Q ss_pred E-EEEecCC---ccHHHHHHhCCCCCHHHHHHHHHHHHHHH-HHHHhCCeeeccCCCCCeeeCCC----CcEEEeccccc
Q 008607 103 Y-VVFELME---SDLHQVIKANDDLTPEHYQFFLYQLLRGL-KYIHTANVFHRDLKPKNILANAD----CKLKICDFGLA 173 (560)
Q Consensus 103 ~-lV~E~~~---gdL~~~i~~~~~lse~~~~~i~~Qll~aL-~yLHs~gIiHrDLKP~NILl~~~----~~lKL~DFGla 173 (560)
+ +|+||++ ++|.++++.. .++++ ..++.|++.++ +|||+++|+||||||+|||++.+ +.++|+||+.+
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 4 7899955 5999999764 57666 36688888888 99999999999999999999743 47999996543
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.82 E-value=6.8e-20 Score=207.72 Aligned_cols=193 Identities=25% Similarity=0.358 Sum_probs=152.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC---CCCccccceeecCCCcCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~---HpnIv~l~~i~~~~~~~~ 98 (560)
+..|.|.+.||+|+||.||.|.+.+ |+.||||+=+- ...+.+.=-.+++.+|+ -+.|+.+...++..+
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P-----~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~--- 767 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKP-----PNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQN--- 767 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecC-----CCceeeeehHHHHHhhchhhhcchHHHHHHHccCC---
Confidence 4679999999999999999999887 99999997542 22233332334444444 244555554443322
Q ss_pred CccEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-------CcEEEecc
Q 008607 99 FKDIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-------CKLKICDF 170 (560)
Q Consensus 99 ~~~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-------~~lKL~DF 170 (560)
.-+||+||.+ |+|.+++..++.+++..+.+|..|+|+.|+.||..+|||+||||+|+||... --|+|+||
T Consensus 768 --~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDf 845 (974)
T KOG1166|consen 768 --ASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDF 845 (974)
T ss_pred --cceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEec
Confidence 3589999999 8999999988899999999999999999999999999999999999998542 34999999
Q ss_pred cccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCC
Q 008607 171 GLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGK 228 (560)
Q Consensus 171 Gla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~ 228 (560)
|.+-...-- +....+...++|-.+-.+|...| ..|+..+|.|.|+-+++.||.|+
T Consensus 846 G~siDm~lf-p~~~~F~~~~~td~f~C~EM~~g--rpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 846 GRSIDMKLF-PDGTKFKAVWHTDLFDCIEMREG--RPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ccceeeeEc-CCCcEEeeeeccccchhHHHhcC--CCCchhhhhHHHHHHHHHHHHHH
Confidence 988653211 12234566788888999999988 68999999999999999999998
No 424
>smart00090 RIO RIO-like kinase.
Probab=99.80 E-value=1.3e-19 Score=179.89 Aligned_cols=148 Identities=19% Similarity=0.147 Sum_probs=113.8
Q ss_pred CCCCceEEEEEEeecCCeEEEEEE-ECCCCcEEEEEEecCcccChh----------------------HHHHHHHHHHHH
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAY-DTRTGEKVAIKKINDIFEHVS----------------------DATRILREIKLL 76 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~-d~~tg~~vAiK~i~~~~~~~~----------------------~~~~i~rEi~iL 76 (560)
.-|.-|++.+.||+|+||.||+|. +..+|+.||||+++....... ....+.+|+.++
T Consensus 25 ~~~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L 104 (237)
T smart00090 25 NRGILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNL 104 (237)
T ss_pred hcCchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHH
Confidence 335568999999999999999999 778999999999874221000 112356899999
Q ss_pred HhcCCCCccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC-eeeccCCC
Q 008607 77 RLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTAN-VFHRDLKP 154 (560)
Q Consensus 77 ~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~g-IiHrDLKP 154 (560)
..+.+. ++.+..++.. ...|+||||++| +|.........+....+..++.||+.+|.+||+.| |+||||||
T Consensus 105 ~~L~~~-~i~~p~~~~~------~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp 177 (237)
T smart00090 105 QRLYEA-GVPVPKPIAW------RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSE 177 (237)
T ss_pred HHHHhc-CCCCCeeeEe------cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCCh
Confidence 999753 3333333311 124899999998 55555444455677778899999999999999999 99999999
Q ss_pred CCeeeCCCCcEEEeccccccc
Q 008607 155 KNILANADCKLKICDFGLARV 175 (560)
Q Consensus 155 ~NILl~~~~~lKL~DFGla~~ 175 (560)
+|||++ ++.++|+|||++..
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhc
Confidence 999999 88999999998864
No 425
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.80 E-value=2.3e-20 Score=195.69 Aligned_cols=254 Identities=24% Similarity=0.378 Sum_probs=167.3
Q ss_pred CceEEEEEEeecCCeEEEEEEECCC---CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccce-------eec
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKH-------ILL 92 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~t---g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~-------i~~ 92 (560)
..+.+.+.++..++|.+....-... .+.+.-+... ..+........+++-.+....|.+..-+.+ .+.
T Consensus 244 ~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~--~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~ 321 (516)
T KOG1033|consen 244 GSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRAD--VDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSK 321 (516)
T ss_pred ccccccccccccccCCchhhhhcccchhhhhccchhhh--ccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcc
Confidence 4455556666666666654432222 2233333221 112233445556666666665544333333 111
Q ss_pred CCCcCCCccEEEEEecCC-ccHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEe
Q 008607 93 PPSRREFKDIYVVFELME-SDLHQVIKAND---DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~---~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
........++||.|++|. .+|.++|..+. ..+...++.|+.|+..|++| +|.+|+|+||.||+...++.+||.
T Consensus 322 ~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIg 398 (516)
T KOG1033|consen 322 RNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIG 398 (516)
T ss_pred ccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhh
Confidence 111112236899999998 68999997543 46778899999999999999 999999999999999999999999
Q ss_pred cccccccccCCC---CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhC-CCCCCCCChhhHHHHHH
Q 008607 169 DFGLARVAFNDT---PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVHQLDIMT 244 (560)
Q Consensus 169 DFGla~~~~~~~---~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG-~~pF~~~~~~~~~~~i~ 244 (560)
|||+........ +.....+..+||.|||+||.+.+ ..|+.++||||||+|||||+.- .-.| +.+..+
T Consensus 399 DFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g--~~y~~kvdIyaLGlil~EL~~~f~T~~------er~~t~- 469 (516)
T KOG1033|consen 399 DFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG--QQYSEKVDIYALGLILAELLIQFSTQF------ERIATL- 469 (516)
T ss_pred hhhheeecccCCcccchhhhhhhcccccccCCHHHHhh--hhhhhhcchhhHHHHHHHHHHHhccHH------HHHHhh-
Confidence 999998765443 11223567899999999999988 6899999999999999999872 1111 111111
Q ss_pred HhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccc
Q 008607 245 DLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYF 316 (560)
Q Consensus 245 ~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f 316 (560)
..++... +...+..-.|...+||++||...|.+||++.+.--|.|.
T Consensus 470 -----------------------~d~r~g~---ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 470 -----------------------TDIRDGI---IPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred -----------------------hhhhcCC---CChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 1111111 111111223556789999999999999987777666664
No 426
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=2.5e-20 Score=206.89 Aligned_cols=265 Identities=27% Similarity=0.373 Sum_probs=207.0
Q ss_pred CCceEEEEEEeecCCeEEEEEEECC-CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCC
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~-tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~ 99 (560)
...|.+.+.||+|+|+.|-++.... +...+|+|.+...........++..|..+-+.+. |.|++.+++....+
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~----- 93 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSP----- 93 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCC-----
Confidence 4568888999999999998887643 4556788887754434445566677888888887 99999998877443
Q ss_pred ccEEEEEecCCc-cHHHHH-HhCC-CCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCCCCeeeCCCC-cEEEecccccc
Q 008607 100 KDIYVVFELMES-DLHQVI-KAND-DLTPEHYQFFLYQLLRGLKYIH-TANVFHRDLKPKNILANADC-KLKICDFGLAR 174 (560)
Q Consensus 100 ~~i~lV~E~~~g-dL~~~i-~~~~-~lse~~~~~i~~Qll~aL~yLH-s~gIiHrDLKP~NILl~~~~-~lKL~DFGla~ 174 (560)
...++++++..| ++...+ .... .++......++.|+..+|.|+| ..++.|+||||+|.+++..+ .+|+.|||+|.
T Consensus 94 ~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At 173 (601)
T KOG0590|consen 94 RSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLAT 173 (601)
T ss_pred cccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhc
Confidence 357899999775 888888 5554 6888899999999999999999 99999999999999999999 99999999998
Q ss_pred cccCCCCCccccccccc-CcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHH
Q 008607 175 VAFNDTPTAIFWTDYVA-TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPE 253 (560)
Q Consensus 175 ~~~~~~~~~~~~~~~~g-T~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~ 253 (560)
...............+| ++.|+|||.+.+. ....+..|+||+|+++..+++|..||......+.
T Consensus 174 ~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~-~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~-------------- 238 (601)
T KOG0590|consen 174 AYRNKNGAERSLKDRCGSSPPYGAPEHLSGK-AYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDG-------------- 238 (601)
T ss_pred cccccCCcceeeecccCCCCCCCCcccccch-hhcCCCcccccccccccccccCCCCccccccccc--------------
Confidence 87652223334456788 9999999998763 3456789999999999999999999865432221
Q ss_pred HHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 254 AIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
.|...+. .....-...|...+..+.+++.++|..+|..|.+.+++-.++|+..
T Consensus 239 -----------~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 239 -----------RYSSWKS-NKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred -----------cceeecc-cccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 1111111 1111123345677888999999999999999999999999999987
No 427
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.77 E-value=2.9e-18 Score=166.47 Aligned_cols=135 Identities=22% Similarity=0.285 Sum_probs=109.4
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh------hHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV------SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDI 102 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~------~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i 102 (560)
+.||+|++|.||+|++ .|..+++|+........ ....++.+|+.++..+.|++|.....++... ...
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDP-----ENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeC-----CCC
Confidence 5799999999999976 78889999865322111 1224577899999999999987766655332 246
Q ss_pred EEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 103 YVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 103 ~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
++||||++| +|.+++..... ....++.+|+.+|.+||+.||+|||++|.|||++ ++.++|+|||++..
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 899999986 89888865432 7888999999999999999999999999999999 78999999999865
No 428
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.74 E-value=1.9e-18 Score=167.14 Aligned_cols=242 Identities=17% Similarity=0.233 Sum_probs=181.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
...+.-+|.+.-.|..|+++ ..|..+++|++.-..........|..|.-.|+.+.||||+.+++.+..+ .++.
T Consensus 191 ~lnl~tkl~e~hsgelwrgr--wqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsp-----pnlv 263 (448)
T KOG0195|consen 191 SLNLITKLAESHSGELWRGR--WQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSP-----PNLV 263 (448)
T ss_pred hhhhhhhhccCCCccccccc--ccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCC-----CCce
Confidence 45566778899999999994 6788888888864333334445678899999999999999999999555 3589
Q ss_pred EEEecCC-ccHHHHHHhCCC--CCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeeeCCCCcEEEe--cccccccc
Q 008607 104 VVFELME-SDLHQVIKANDD--LTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKIC--DFGLARVA 176 (560)
Q Consensus 104 lV~E~~~-gdL~~~i~~~~~--lse~~~~~i~~Qll~aL~yLHs~g--IiHrDLKP~NILl~~~~~lKL~--DFGla~~~ 176 (560)
++..||+ |+|+.++..... ++..++.+|+..+++|++|||+.. |.---|....++||++.+.+|. |--++..
T Consensus 264 ~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq- 342 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ- 342 (448)
T ss_pred EeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee-
Confidence 9999999 799999987543 577888999999999999999985 3344678888999998765543 3222211
Q ss_pred cCCCCCcccccccccCcccccccccccccC-CCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHH
Q 008607 177 FNDTPTAIFWTDYVATRWYRAPELCGSFFS-KYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAI 255 (560)
Q Consensus 177 ~~~~~~~~~~~~~~gT~~Y~APEll~~~~~-~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~ 255 (560)
.....-.+.|++||.+..... ..-.++|+|||+++++||.|...||..-...+.-.+|
T Consensus 343 ---------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki------------ 401 (448)
T KOG0195|consen 343 ---------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI------------ 401 (448)
T ss_pred ---------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh------------
Confidence 122345788999999864211 1235789999999999999999999876655432222
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHh
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEAL 311 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL 311 (560)
.++.++. ...|+++.....|+.-|+.-||.+||.++.++
T Consensus 402 ----------aleglrv-------~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 402 ----------ALEGLRV-------HIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred ----------hhccccc-------cCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 1233332 23478899999999999999999999987764
No 429
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.73 E-value=1.2e-17 Score=161.13 Aligned_cols=138 Identities=22% Similarity=0.185 Sum_probs=105.6
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh--------------------hHHHHHHHHHHHHHhcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--------------------SDATRILREIKLLRLLRHP 82 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~--------------------~~~~~i~rEi~iL~~l~Hp 82 (560)
..|.+.+.||+|+||.||++.+. +|+.||||++....... .......+|+.++..+.|.
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~ 93 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEE 93 (198)
T ss_pred chhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHc
Confidence 34888999999999999999874 79999999875321000 0112356799999999877
Q ss_pred Cc--cccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeee
Q 008607 83 DI--VEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159 (560)
Q Consensus 83 nI--v~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl 159 (560)
++ ...++. ...++||||++| +|..+.. ......++.+|+.++.++|..||+||||||+||++
T Consensus 94 ~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill 158 (198)
T cd05144 94 GFPVPKPIDW---------NRHAVVMEYIDGVELYRVRV------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV 158 (198)
T ss_pred CCCCCceeec---------CCceEEEEEeCCcchhhccc------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE
Confidence 53 222221 235899999997 6655432 13467789999999999999999999999999999
Q ss_pred CCCCcEEEecccccccc
Q 008607 160 NADCKLKICDFGLARVA 176 (560)
Q Consensus 160 ~~~~~lKL~DFGla~~~ 176 (560)
+.++.++|+|||++...
T Consensus 159 ~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 159 DDDEKIYIIDWPQMVST 175 (198)
T ss_pred cCCCcEEEEECCccccC
Confidence 99999999999998543
No 430
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.72 E-value=1.6e-17 Score=159.79 Aligned_cols=131 Identities=28% Similarity=0.390 Sum_probs=102.2
Q ss_pred EEeecCCeEEEEEEECCCCcEEEEEEecCc-ccCh-----hHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEE
Q 008607 30 VIGKGSYGVVCSAYDTRTGEKVAIKKINDI-FEHV-----SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~-~~~~-----~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~ 103 (560)
.||+|+||.||++. .+|..+++|+.... .... ....++.+|+++++.++|+++....-++... ...+
T Consensus 1 ~ig~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-----~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDP-----DNKT 73 (199)
T ss_pred CCCCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC-----CCCE
Confidence 48999999999997 46788999985432 1111 1235677899999999988755443333222 2358
Q ss_pred EEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 104 VVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 104 lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
+||||++| +|.+++..... .++.|++.+|.+||+.||+|||++|.|||++ ++.++|+|||++..
T Consensus 74 lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999986 88887755321 7899999999999999999999999999999 88999999999865
No 431
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=5.7e-17 Score=179.63 Aligned_cols=138 Identities=22% Similarity=0.309 Sum_probs=106.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEec-Cccc-----ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN-DIFE-----HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR 96 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~-~~~~-----~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~ 96 (560)
..|...+.||+|+||+||++... +..+++|+.. +... ......++.+|+++++.++|++++.........
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~-- 408 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP-- 408 (535)
T ss_pred cccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC--
Confidence 34566799999999999999754 3445554432 2111 112235688999999999999988766555332
Q ss_pred CCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 97 REFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 97 ~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...++||||++| +|.+++. ....++.||+.+|.+||+.||+||||||+|||+ .++.++|+|||+++.
T Consensus 409 ---~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 409 ---EEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred ---CCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 236899999985 8888875 356789999999999999999999999999999 678999999999976
Q ss_pred c
Q 008607 176 A 176 (560)
Q Consensus 176 ~ 176 (560)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 3
No 432
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.69 E-value=1.2e-16 Score=152.08 Aligned_cols=136 Identities=25% Similarity=0.259 Sum_probs=96.1
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHH----------------------HHHHHHHHHhcCCCC--
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATR----------------------ILREIKLLRLLRHPD-- 83 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~----------------------i~rEi~iL~~l~Hpn-- 83 (560)
.+.||+|+||.||+|.+. +|+.||||++............ ...|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 8999999998643221111111 135666666665433
Q ss_pred ccccceeecCCCcCCCccEEEEEecCCc-cHH-HHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeeccCCCCCeeeC
Q 008607 84 IVEIKHILLPPSRREFKDIYVVFELMES-DLH-QVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRDLKPKNILAN 160 (560)
Q Consensus 84 Iv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~-~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrDLKP~NILl~ 160 (560)
+...+.. ...++||||+++ .+. ..+.... . ...++.++.+++.++.++|. .||+||||||+||+++
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD 149 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE
Confidence 2222221 125899999997 211 1111111 1 16788999999999999999 9999999999999999
Q ss_pred CCCcEEEecccccccc
Q 008607 161 ADCKLKICDFGLARVA 176 (560)
Q Consensus 161 ~~~~lKL~DFGla~~~ 176 (560)
++.++|+|||++...
T Consensus 150 -~~~~~liDfg~a~~~ 164 (187)
T cd05119 150 -DGKVYIIDVPQAVEI 164 (187)
T ss_pred -CCcEEEEECcccccc
Confidence 899999999998653
No 433
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=5.7e-17 Score=173.23 Aligned_cols=256 Identities=26% Similarity=0.268 Sum_probs=199.6
Q ss_pred ceEEEEEEee--cCCeEEEEEEE--CCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCC
Q 008607 24 RYKIEEVIGK--GSYGVVCSAYD--TRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 24 ~Y~i~~~IG~--G~~G~Vy~a~d--~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~ 98 (560)
.+.+.+.+|. |.+|.||.+.. ..++..+|+|+-+..+.......+-++|+...+.+. |+|.++.+..+ +.
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~-----e~ 189 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW-----EG 189 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc-----cc
Confidence 5777888999 99999999998 889999999986554454444555567888888776 99999866666 34
Q ss_pred CccEEEEEecCCccHHHHHHhCCC-CCHHHHHHHHHHHHH----HHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccc
Q 008607 99 FKDIYVVFELMESDLHQVIKANDD-LTPEHYQFFLYQLLR----GLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGL 172 (560)
Q Consensus 99 ~~~i~lV~E~~~gdL~~~i~~~~~-lse~~~~~i~~Qll~----aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGl 172 (560)
....|+-+|+|+.+|..+...... +++..++..+.+... ||.++|+.+|+|-|+||.||++..+ +..+++|||+
T Consensus 190 ~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 190 SGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred CCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcce
Confidence 456899999999999998877555 899999999999999 9999999999999999999999999 8899999999
Q ss_pred cccccCCCCCcccc--cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCC--ChhhHHHHHHHhcC
Q 008607 173 ARVAFNDTPTAIFW--TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGK--NVVHQLDIMTDLLG 248 (560)
Q Consensus 173 a~~~~~~~~~~~~~--~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~--~~~~~~~~i~~~~g 248 (560)
........-...+. ....|..-|++||++.+ .++.+.||+++|.++.+..+|..++... +.+.+++.+.
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~---l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~---- 342 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG---LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY---- 342 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhcc---ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc----
Confidence 98765443222111 12256778999999976 5788999999999999999998776554 3333332211
Q ss_pred CCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 249 TPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 249 ~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
++ .+.....+..+...+..|++.||..|++++.+++|+++...
T Consensus 343 ---------------------------ip-~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 343 ---------------------------IP-LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred ---------------------------Cc-hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 00 11122334555669999999999999999999999998743
No 434
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.64 E-value=2.3e-15 Score=149.64 Aligned_cols=139 Identities=22% Similarity=0.284 Sum_probs=103.2
Q ss_pred EEEe-ecCCeEEEEEEECCCCcEEEEEEecCc------cc-----ChhHHHHHHHHHHHHHhcCCCCc--cccceeecCC
Q 008607 29 EVIG-KGSYGVVCSAYDTRTGEKVAIKKINDI------FE-----HVSDATRILREIKLLRLLRHPDI--VEIKHILLPP 94 (560)
Q Consensus 29 ~~IG-~G~~G~Vy~a~d~~tg~~vAiK~i~~~------~~-----~~~~~~~i~rEi~iL~~l~HpnI--v~l~~i~~~~ 94 (560)
..|| .|+.|+||.+.. .+..++||.+... .. ......++.+|+.++..|+|++| +..+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4577 788888888865 3788999987421 01 11234568899999999998875 4555543222
Q ss_pred CcCCCccEEEEEecCCc--cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccc
Q 008607 95 SRREFKDIYVVFELMES--DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGL 172 (560)
Q Consensus 95 ~~~~~~~i~lV~E~~~g--dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGl 172 (560)
.. .....++|||+++| +|.+++.. ..+++.. +.||+.+|.+||++||+||||||.|||++.++.++|+|||.
T Consensus 115 ~~-~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~ 188 (239)
T PRK01723 115 HG-LFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDR 188 (239)
T ss_pred cC-cceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCC
Confidence 11 11123599999995 78888765 3566553 57899999999999999999999999999999999999998
Q ss_pred ccc
Q 008607 173 ARV 175 (560)
Q Consensus 173 a~~ 175 (560)
++.
T Consensus 189 ~~~ 191 (239)
T PRK01723 189 GEL 191 (239)
T ss_pred ccc
Confidence 865
No 435
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=6.9e-15 Score=132.96 Aligned_cols=131 Identities=23% Similarity=0.216 Sum_probs=105.8
Q ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCC--CCccccceeecCCCcCCCccEEE
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH--PDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~H--pnIv~l~~i~~~~~~~~~~~i~l 104 (560)
+++.||.|.++.||++.+.. ..+++|.+..... ...+.+|+.+++.++| .++.+++...... ...|+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~-----~~~~~ 70 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGESD-----GWSYL 70 (155)
T ss_pred cceecccccccceEEEEecC--CeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCC-----CccEE
Confidence 46789999999999998644 7899998864322 4567889999999986 4777777665322 45899
Q ss_pred EEecCCcc-HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 105 VFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 105 V~E~~~gd-L~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~---gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
+|||+.|. +..+ +......++.+++.+|++||.. +|+|+||+|.|||++..+.++++|||+++.
T Consensus 71 v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 71 LMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99999873 3332 5567778899999999999985 699999999999999989999999998854
No 436
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.55 E-value=2.4e-15 Score=168.27 Aligned_cols=264 Identities=23% Similarity=0.275 Sum_probs=199.6
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc-ChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE-HVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~-~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
...+.+.+-+-+|+++.++.+.-..+|...++|....... ...+...+.++-.++-..++|-++...--+. -..
T Consensus 803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~-----~rs 877 (1205)
T KOG0606|consen 803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFP-----CRS 877 (1205)
T ss_pred CccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCC-----CCC
Confidence 3457788889999999999998888887777776543211 1123445555666666666777765433321 123
Q ss_pred cEEEEEecCC-ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCC
Q 008607 101 DIYVVFELME-SDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND 179 (560)
Q Consensus 101 ~i~lV~E~~~-gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~ 179 (560)
..+||++|.. ++|...+...+..+.+-.+.++..+..+++|||+..+.|+|++|.|+|+..++..++.|||......-.
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred CcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccc
Confidence 5799999997 599999988888999999999999999999999999999999999999999999999999954332110
Q ss_pred CC--------C------------------c--ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCC
Q 008607 180 TP--------T------------------A--IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLF 231 (560)
Q Consensus 180 ~~--------~------------------~--~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF 231 (560)
.+ . . ......++|+.|.+||.+.+ .....++|+|++|++++|.++|.+||
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg--~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG--RRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc--ccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 0 0 01123578999999999987 46678999999999999999999999
Q ss_pred CCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHH---
Q 008607 232 PGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAE--- 308 (560)
Q Consensus 232 ~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~--- 308 (560)
........++.| . +..++|.......++.+.+++.++|..+|.+|..+.
T Consensus 1036 na~tpq~~f~ni---------------------------~-~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~ 1087 (1205)
T KOG0606|consen 1036 NAETPQQIFENI---------------------------L-NRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAA 1087 (1205)
T ss_pred CCcchhhhhhcc---------------------------c-cCCCCCCCCccccChhhhhhhhhhhccCchhccCccccc
Confidence 876654433222 1 223455555567789999999999999999998877
Q ss_pred HHhcCccccccc
Q 008607 309 EALADPYFKGLA 320 (560)
Q Consensus 309 elL~hp~f~~~~ 320 (560)
++-.|+||+...
T Consensus 1088 e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1088 EVKGHPFFQDVD 1099 (1205)
T ss_pred ccccCCccCCCC
Confidence 888999998754
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.47 E-value=1.5e-14 Score=143.93 Aligned_cols=246 Identities=20% Similarity=0.228 Sum_probs=160.9
Q ss_pred EEEEEEECCCCcEEEEEEecCcc-cChhHH-HHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-ccHH
Q 008607 38 VVCSAYDTRTGEKVAIKKINDIF-EHVSDA-TRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLH 114 (560)
Q Consensus 38 ~Vy~a~d~~tg~~vAiK~i~~~~-~~~~~~-~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~ 114 (560)
.||++.+...|..|+.-.+.... .+.... .....-..-|-.+-|.|||+++.+|.+...++...+.++.|||+ |.|.
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~ 160 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLK 160 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHH
Confidence 35677777777777665553110 011100 11111123344556999999999987766666677899999998 6888
Q ss_pred HHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCC--eeeccCCCCCeeeCCCCcEEEeccccccc--ccCCCCCcccc
Q 008607 115 QVIKA----NDDLTPEHYQFFLYQLLRGLKYIHTAN--VFHRDLKPKNILANADCKLKICDFGLARV--AFNDTPTAIFW 186 (560)
Q Consensus 115 ~~i~~----~~~lse~~~~~i~~Qll~aL~yLHs~g--IiHrDLKP~NILl~~~~~lKL~DFGla~~--~~~~~~~~~~~ 186 (560)
+++++ ...+.....++|+-||+.||.|||+.. |+|+++..+-|++..+|-+||+----... ..+.... ...
T Consensus 161 ~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~-~Ek 239 (458)
T KOG1266|consen 161 QFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTRE-AEK 239 (458)
T ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhH-hhh
Confidence 88865 235889999999999999999999885 99999999999999999888763221111 0000000 001
Q ss_pred cccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCC-CCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHH
Q 008607 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARR 265 (560)
Q Consensus 187 ~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~p-F~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 265 (560)
.-..+-+.|.+||.=.. ...+.++|||++|.+..+|..|..- -.+.+...--..|..
T Consensus 240 ~~~~~~~g~~a~~sg~~--tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~-------------------- 297 (458)
T KOG1266|consen 240 SVNTSLPGFSAPESGTT--TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIAN-------------------- 297 (458)
T ss_pred hccccCCccccCCcCcc--cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhh--------------------
Confidence 12345678899986433 3456789999999999999887732 222211111011110
Q ss_pred HHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCccccccc
Q 008607 266 YLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGLA 320 (560)
Q Consensus 266 ~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~~ 320 (560)
.+ +.--++.-+++|.+||+-.|..||++.++|.||.+-+++
T Consensus 298 ~i--------------~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 298 VI--------------IGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred he--------------eeccCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 00 011123345699999999999999999999999976554
No 438
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.46 E-value=1.7e-12 Score=140.47 Aligned_cols=184 Identities=23% Similarity=0.340 Sum_probs=135.5
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
|.+ +..+-++.+..-.|..+.++..|.|.+.+.... .....+.+-++-|+.|+||||+++++.+. ....+||
T Consensus 15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e-----~~~~~yl 86 (690)
T KOG1243|consen 15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTE-----EEGTLYL 86 (690)
T ss_pred ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhc-----ccCceEE
Confidence 555 444445554333466678899999988875322 34456778899999999999999999873 3347999
Q ss_pred EEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH-hCCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCc
Q 008607 105 VFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIH-TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTA 183 (560)
Q Consensus 105 V~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLH-s~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~ 183 (560)
|+|-+.. |..++++ +....+..-++||+.||.||| +.+++|++|.-+-|+|+..|..||++|.++.........
T Consensus 87 vTErV~P-l~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~- 161 (690)
T KOG1243|consen 87 VTERVRP-LETVLKE---LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP- 161 (690)
T ss_pred Eeecccc-HHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc-
Confidence 9998863 4445544 337788889999999999997 678999999999999999999999999988654322210
Q ss_pred ccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhC
Q 008607 184 IFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTG 227 (560)
Q Consensus 184 ~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG 227 (560)
.....---.|..|+.+.. . +-..|.|.|||+++|++.|
T Consensus 162 --~~~~~~~~s~~~P~~~~~--s--~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 162 --AKSLYLIESFDDPEEIDP--S--EWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred --cccchhhhcccChhhcCc--c--ccchhhhhHHHHHHHHhCc
Confidence 111222234677776643 1 2467999999999999999
No 439
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.40 E-value=1.4e-12 Score=125.04 Aligned_cols=139 Identities=22% Similarity=0.262 Sum_probs=98.9
Q ss_pred EEEEeecCCeEEEEEEECC------CCcEEEEEEecCc---c-------------c----ChhHHHHH----HHHHHHHH
Q 008607 28 EEVIGKGSYGVVCSAYDTR------TGEKVAIKKINDI---F-------------E----HVSDATRI----LREIKLLR 77 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~------tg~~vAiK~i~~~---~-------------~----~~~~~~~i----~rEi~iL~ 77 (560)
...||.|--+.||.|.... .+..+|||+.+-. + . +......+ .+|+..|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3569999999999997653 3579999987411 1 0 01112222 38999999
Q ss_pred hcCC--CCccccceeecCCCcCCCccEEEEEecCCcc-HHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCeeeccCC
Q 008607 78 LLRH--PDIVEIKHILLPPSRREFKDIYVVFELMESD-LHQVIKANDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLK 153 (560)
Q Consensus 78 ~l~H--pnIv~l~~i~~~~~~~~~~~i~lV~E~~~gd-L~~~i~~~~~lse~~~~~i~~Qll~aL~yL-Hs~gIiHrDLK 153 (560)
.+.. -++..++.+. .-+|||||++++ +..-..+...++++....++.|++.+|..| |..||+|+||+
T Consensus 82 rl~~~Gv~vP~pi~~~---------~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs 152 (197)
T cd05146 82 RMQKAGIPCPEVVVLK---------KHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLS 152 (197)
T ss_pred HHHHcCCCCCeEEEec---------CCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 8864 3444444431 238999999863 322222233466677788899999999999 89999999999
Q ss_pred CCCeeeCCCCcEEEecccccccc
Q 008607 154 PKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 154 P~NILl~~~~~lKL~DFGla~~~ 176 (560)
+.|||+. ++.+.|+|||.+...
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeC
Confidence 9999997 568999999988643
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.40 E-value=3.6e-13 Score=147.35 Aligned_cols=140 Identities=22% Similarity=0.332 Sum_probs=93.9
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh--------------------------------hHHHHHHHH
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV--------------------------------SDATRILRE 72 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~--------------------------------~~~~~i~rE 72 (560)
|+. +.||+|++|.||+|+.+.+|+.||||+++...... .....+.+|
T Consensus 122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 444 67999999999999998889999999986321000 111223344
Q ss_pred HHHHHhc------C----CCCccccceeecCCCcCCCccEEEEEecCCc-cHHHH--HHhCC----CCCHHHHHHHHHHH
Q 008607 73 IKLLRLL------R----HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV--IKAND----DLTPEHYQFFLYQL 135 (560)
Q Consensus 73 i~iL~~l------~----HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~--i~~~~----~lse~~~~~i~~Ql 135 (560)
+.+++.. + +.+.+.+-.++..- ....+|||||++| .+.++ +.+.+ .+.+..+..++.|+
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~----st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDY----CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeeccc----CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 4444333 2 23333333333211 1235799999997 67653 33333 25566666677776
Q ss_pred HHHHHHHHhCCeeeccCCCCCeeeCCCC----cEEEecccccccc
Q 008607 136 LRGLKYIHTANVFHRDLKPKNILANADC----KLKICDFGLARVA 176 (560)
Q Consensus 136 l~aL~yLHs~gIiHrDLKP~NILl~~~~----~lKL~DFGla~~~ 176 (560)
+ ..|++|+|+||.||+++.++ .++++|||++...
T Consensus 277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 5 48999999999999999988 9999999998654
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.36 E-value=2.3e-12 Score=120.30 Aligned_cols=126 Identities=20% Similarity=0.184 Sum_probs=92.0
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcCCCccEEEEE
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~i~~~~~~~~~~~i~lV~ 106 (560)
++.|+.|.++.||++... +..|++|....... ....+.+|+.+++.+.+.+++ +++... . ..-++||
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~-----~~~~lv~ 70 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--P-----ETGVLIT 70 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe--C-----CCCeEEE
Confidence 467899999999999754 78999998754211 122456899999988765544 333322 1 1237999
Q ss_pred ecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCe-----eeccCCCCCeeeCCCCcEEEecccccc
Q 008607 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV-----FHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 107 E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gI-----iHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
|+++| ++... .. ....++.+++++|+.||+.++ +|+|++|.||+++ ++.++|+|||.+.
T Consensus 71 e~i~G~~l~~~-----~~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 71 EFIEGSELLTE-----DF---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred EecCCCccccc-----cc---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 99997 44322 11 123457899999999999985 9999999999999 6789999999874
No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=5.5e-12 Score=136.10 Aligned_cols=140 Identities=21% Similarity=0.261 Sum_probs=92.2
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhH--------------------------------HH------HHH
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD--------------------------------AT------RIL 70 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~--------------------------------~~------~i~ 70 (560)
+.||.|++|.||+|+. .+|+.||||+.+......-. .. .+.
T Consensus 123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 4699999999999986 47999999998532100000 00 133
Q ss_pred HHHHHHHhc----CCCCccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhC-CCCCHHHHHHHHHHHHH-HHHHHH
Q 008607 71 REIKLLRLL----RHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKAN-DDLTPEHYQFFLYQLLR-GLKYIH 143 (560)
Q Consensus 71 rEi~iL~~l----~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~-~~lse~~~~~i~~Qll~-aL~yLH 143 (560)
+|...+..+ +|.+-+.+-.++..-+ ..-+|||||++| +|.++.... ..+. ...++.+++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~ 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVL 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHH
Confidence 444444444 2333333434442211 235899999997 666655421 1222 2345555655 478899
Q ss_pred hCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 144 TANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 144 s~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..|++|+|++|.||+++.++.++|+|||++...
T Consensus 275 ~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 275 RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred hCCceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 999999999999999999999999999998654
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35 E-value=1.2e-12 Score=140.26 Aligned_cols=250 Identities=22% Similarity=0.219 Sum_probs=176.8
Q ss_pred CceEEEEEEeecCCeEEEEEEEC-CCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceeecCCCcCCCc
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDT-RTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~-~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.+|..+..||.|.|+.|+.+.-. .++..|++|.+.+......+...-+.|+-+...+ .|.+++++...|. ...
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-----~~r 339 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-----QLR 339 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-----ccc
Confidence 35788899999999999987644 6788999998876544444444445677777666 4889998877773 334
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC-CcEEEecccccccccC
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD-CKLKICDFGLARVAFN 178 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~-~~lKL~DFGla~~~~~ 178 (560)
+.||-.|||++ ++...+.-...+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||++....-
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~ 419 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAF 419 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccccce
Confidence 57899999975 444444434468899999999999999999999999999999999999886 7889999998863111
Q ss_pred CCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHh
Q 008607 179 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARV 258 (560)
Q Consensus 179 ~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~ 258 (560)
... ...-+++.|-..|++... ..+..+.|++|||.-+.+.++|.+.-...+....+
T Consensus 420 ~~~-----~~~~~~r~~p~~~~~~e~-~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i------------------ 475 (524)
T KOG0601|consen 420 SSG-----VFHHIDRLYPIAEILLED-YPHLSKADIFSLGLSVDEAITGSPLSESGVQSLTI------------------ 475 (524)
T ss_pred ecc-----cccccccccccchhhccc-cccccccccccccccccccccCcccCcccccceee------------------
Confidence 000 111233444224544432 56778999999999999999998543222211100
Q ss_pred hhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccc
Q 008607 259 RNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFK 317 (560)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~ 317 (560)
+. ......+.....+..+.+.|+..|+..|+.+.++..|.=|.
T Consensus 476 ------------~~----~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 476 ------------RS----GDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFY 518 (524)
T ss_pred ------------ec----ccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhh
Confidence 00 00011123346678899999999999999999998876654
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.19 E-value=5.9e-10 Score=117.58 Aligned_cols=215 Identities=17% Similarity=0.195 Sum_probs=154.9
Q ss_pred CCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc--c
Q 008607 35 SYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES--D 112 (560)
Q Consensus 35 ~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g--d 112 (560)
.-.+.|++....+|..|++|.++... .........-++.++++.|+|+|.+.++|.+... ....+++|++|+++ +
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r--~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDR--DQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeecccc--ccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCch
Confidence 34567999999999999999994211 1111122345788999999999999999985543 33468999999984 7
Q ss_pred HHHHHHh---------------CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccccc
Q 008607 113 LHQVIKA---------------NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAF 177 (560)
Q Consensus 113 L~~~i~~---------------~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~ 177 (560)
|.++.-. +...+|..+|.|+.||..||.++|+.|+.-+-|.|.+||++.+.+++|...|...+..
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~ 444 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ 444 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence 8776632 2247789999999999999999999999999999999999999999999998876654
Q ss_pred CCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCC-CCCCChhhH-HHHHHHhcCCCCHHHH
Q 008607 178 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPL-FPGKNVVHQ-LDIMTDLLGTPSPEAI 255 (560)
Q Consensus 178 ~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~p-F~~~~~~~~-~~~i~~~~g~p~~~~~ 255 (560)
.+.. |.+.+ ..+-|.=.||.+++.|.||..- +........ ++.|
T Consensus 445 ~d~~-----------------~~le~-----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~I------------ 490 (655)
T KOG3741|consen 445 EDPT-----------------EPLES-----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTRI------------ 490 (655)
T ss_pred CCCC-----------------cchhH-----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHh------------
Confidence 4330 12222 2467999999999999999632 111111100 1111
Q ss_pred HHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcC
Q 008607 256 ARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALAD 313 (560)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~h 313 (560)
.+.++.++.++|.-+...++.+ -++++++.|
T Consensus 491 --------------------------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~ 521 (655)
T KOG3741|consen 491 --------------------------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM 521 (655)
T ss_pred --------------------------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence 1345667777888777777776 678888764
No 445
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=4.3e-10 Score=104.61 Aligned_cols=142 Identities=23% Similarity=0.302 Sum_probs=104.6
Q ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEE-ecCcccCh-----hHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCc
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKK-INDIFEHV-----SDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~-i~~~~~~~-----~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~ 100 (560)
.+..|-+|+-+.|+++ ...|+..+||. +.+...+. -...+..+|+++|.+++--.|.-..-++.+..
T Consensus 11 ~l~likQGAEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----- 83 (229)
T ss_pred cceeeeccceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----
Confidence 6788999999999998 46788888886 32322222 23466789999998886444433322332221
Q ss_pred cEEEEEecCCc--cHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCc---EEEeccccc
Q 008607 101 DIYVVFELMES--DLHQVIKAND--DLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK---LKICDFGLA 173 (560)
Q Consensus 101 ~i~lV~E~~~g--dL~~~i~~~~--~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~---lKL~DFGla 173 (560)
.-.|+|||++| ++.+++.... ....+....++.+|-+.|.-||.++|+|+||..+||++..++. +.|+|||++
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence 23799999998 8888887632 2333444789999999999999999999999999999987653 589999998
Q ss_pred cc
Q 008607 174 RV 175 (560)
Q Consensus 174 ~~ 175 (560)
..
T Consensus 164 ~~ 165 (229)
T KOG3087|consen 164 SV 165 (229)
T ss_pred hc
Confidence 65
No 446
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=4.5e-10 Score=104.90 Aligned_cols=130 Identities=22% Similarity=0.353 Sum_probs=92.8
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEE-ecCcccChh-----HHHHHHHHHHHHHhcCCCCc--cccceeecCCCcCCCc
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKK-INDIFEHVS-----DATRILREIKLLRLLRHPDI--VEIKHILLPPSRREFK 100 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~-i~~~~~~~~-----~~~~i~rEi~iL~~l~HpnI--v~l~~i~~~~~~~~~~ 100 (560)
..|++|+-+.++.+.. -|..+++|. +.+...+.. ...+..+|..+|+.++--.| ..++++. +.
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD--~~----- 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVD--PD----- 72 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEc--CC-----
Confidence 3578999999998843 455566664 333333322 23456789999998864333 3334433 21
Q ss_pred cEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 101 DIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 101 ~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
...|+|||++| .|.+++... .-.++..+-.-+.-||.+||+|+||.++||++..++ +.++||||+..
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 24799999998 566677665 145677777788899999999999999999998765 99999999964
No 447
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=7.7e-10 Score=107.48 Aligned_cols=142 Identities=18% Similarity=0.276 Sum_probs=100.7
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC--ccccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~i~~~~~~~~~~~i~lV~ 106 (560)
+.|+.|.++.||++.... |+.+++|+....... .....+.+|+.+++.+++.+ +.+++....... .....++||
T Consensus 4 ~~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~-~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~ 79 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALL-PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVM 79 (223)
T ss_pred eecCCCccceEEEEEecC-CcceEEEeCCCcccC-cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEE
Confidence 568999999999997643 689999987542211 13456789999999997643 455555442211 113468999
Q ss_pred ecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-----------------------------------------
Q 008607 107 ELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT----------------------------------------- 144 (560)
Q Consensus 107 E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs----------------------------------------- 144 (560)
||++| ++...+.. ..++++....++.+++++|..||+
T Consensus 80 e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 80 ERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred EEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 99997 45443321 346677777777777777777773
Q ss_pred ---------------CCeeeccCCCCCeeeCC--CCcEEEeccccccc
Q 008607 145 ---------------ANVFHRDLKPKNILANA--DCKLKICDFGLARV 175 (560)
Q Consensus 145 ---------------~gIiHrDLKP~NILl~~--~~~lKL~DFGla~~ 175 (560)
..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 23699999999999998 66789999998753
No 448
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.06 E-value=8.7e-11 Score=127.80 Aligned_cols=155 Identities=23% Similarity=0.335 Sum_probs=113.3
Q ss_pred HHHHHHHHHh-CCeeeccCCCCCeeeCCCCcEEEecccccccccCCCC-Cccccc-----ccccCcccccccccccccCC
Q 008607 135 LLRGLKYIHT-ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP-TAIFWT-----DYVATRWYRAPELCGSFFSK 207 (560)
Q Consensus 135 ll~aL~yLHs-~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~-~~~~~~-----~~~gT~~Y~APEll~~~~~~ 207 (560)
+..||.|+|. .+++|++|.|++|.+++++.+||+.|+.+........ ....++ -..-...|.|||++.+ ..
T Consensus 108 v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~--~~ 185 (700)
T KOG2137|consen 108 VADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG--TT 185 (700)
T ss_pred ccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc--cc
Confidence 3389999995 5999999999999999999999999998865433111 000011 1234567999999987 56
Q ss_pred CCCccchhhHHHHHHHHh-hCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCC
Q 008607 208 YTPAIDIWSIGCIFAELL-TGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNAN 286 (560)
Q Consensus 208 y~~~~DIWSlG~il~eLl-tG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s 286 (560)
.+.++|+|||||++|.+. .|+..|.+.+.......-...++ ......-.+++
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~---------------------------~~~~~~s~~~p 238 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLN---------------------------AGAFGYSNNLP 238 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccc---------------------------cccccccccCc
Confidence 789999999999999999 67777766543322111110000 00111125778
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHhcCccccc
Q 008607 287 PLALRLLERMLAFEPKDRPTAEEALADPYFKG 318 (560)
Q Consensus 287 ~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~ 318 (560)
+++++=|.++|..|+..||++.+++..|||.+
T Consensus 239 ~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D 270 (700)
T KOG2137|consen 239 SELRESLKKLLNGDSAVRPTLDLLLSIPFFSD 270 (700)
T ss_pred HHHHHHHHHHhcCCcccCcchhhhhcccccCC
Confidence 99999999999999999999999999999985
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.03 E-value=3.7e-09 Score=106.65 Aligned_cols=135 Identities=15% Similarity=0.117 Sum_probs=93.1
Q ss_pred EEEEEEECCCCcEEEEEEecCcccCh---------hHHHHHHHHHHHHHhcCCCCcccc--ceeecCCCcCCCccEEEEE
Q 008607 38 VVCSAYDTRTGEKVAIKKINDIFEHV---------SDATRILREIKLLRLLRHPDIVEI--KHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 38 ~Vy~a~d~~tg~~vAiK~i~~~~~~~---------~~~~~i~rEi~iL~~l~HpnIv~l--~~i~~~~~~~~~~~i~lV~ 106 (560)
.|+.+ ...|+.|.||......... .-...+.+|...+..|..-+|... ..+...........-+|||
T Consensus 37 rvvr~--~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVt 114 (268)
T PRK15123 37 RTLRF--ELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIIT 114 (268)
T ss_pred eEEEE--EECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEE
Confidence 35554 3457789999764221100 001136789999988865444433 2222111111123468999
Q ss_pred ecCCc--cHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC-------CCcEEEecccccc
Q 008607 107 ELMES--DLHQVIKA--NDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA-------DCKLKICDFGLAR 174 (560)
Q Consensus 107 E~~~g--dL~~~i~~--~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~-------~~~lKL~DFGla~ 174 (560)
|++++ +|.+++.. ....++.....++.+++..+.-||.+||+|+||++.|||++. +..+.|+||+.+.
T Consensus 115 e~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 115 EDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred eeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 99997 68888864 335667788899999999999999999999999999999975 4679999999774
No 450
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.97 E-value=5.9e-09 Score=101.35 Aligned_cols=129 Identities=23% Similarity=0.316 Sum_probs=93.7
Q ss_pred CCCcEEEEEEecCcc-----cChhHHHHHHHHHHHHHhcCCCCccc--cceeecCCCcCCCccEEEEEecCCc--cHHHH
Q 008607 46 RTGEKVAIKKINDIF-----EHVSDATRILREIKLLRLLRHPDIVE--IKHILLPPSRREFKDIYVVFELMES--DLHQV 116 (560)
Q Consensus 46 ~tg~~vAiK~i~~~~-----~~~~~~~~i~rEi~iL~~l~HpnIv~--l~~i~~~~~~~~~~~i~lV~E~~~g--dL~~~ 116 (560)
..++.+-+|...... .......+..+|...+..|..-.|.. .+.+..... ......++|+|++++ +|.++
T Consensus 30 ~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~ 108 (206)
T PF06293_consen 30 LVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDL 108 (206)
T ss_pred ccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHH
Confidence 345666666543211 11123456788999888886544433 233322211 111346899999986 79999
Q ss_pred HHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCC---cEEEeccccccc
Q 008607 117 IKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADC---KLKICDFGLARV 175 (560)
Q Consensus 117 i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~---~lKL~DFGla~~ 175 (560)
+.....++......++.++...++-||.+||+|+|+++.|||++.++ .+.|+||+.++.
T Consensus 109 ~~~~~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 109 LQQWEQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHhhcccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 98755577888899999999999999999999999999999999987 899999998764
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.94 E-value=4e-09 Score=100.71 Aligned_cols=127 Identities=28% Similarity=0.312 Sum_probs=81.2
Q ss_pred EEEEEEECCCCcEEEEEEecCc----------------cc------Chh--HHHHHHHHHHHHHhcCCCC--ccccceee
Q 008607 38 VVCSAYDTRTGEKVAIKKINDI----------------FE------HVS--DATRILREIKLLRLLRHPD--IVEIKHIL 91 (560)
Q Consensus 38 ~Vy~a~d~~tg~~vAiK~i~~~----------------~~------~~~--~~~~i~rEi~iL~~l~Hpn--Iv~l~~i~ 91 (560)
.||.|.. ..|..+|||+.+.. +. ... ......+|.+.|..+..-+ +.+++.+.
T Consensus 1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 3888876 56779999986421 00 011 1234678999999998653 45554432
Q ss_pred cCCCcCCCccEEEEEecCC--ccHHHHHHhCCCCCHHHHHHHHHHHHHHHHH-HHhCCeeeccCCCCCeeeCCCCcEEEe
Q 008607 92 LPPSRREFKDIYVVFELME--SDLHQVIKANDDLTPEHYQFFLYQLLRGLKY-IHTANVFHRDLKPKNILANADCKLKIC 168 (560)
Q Consensus 92 ~~~~~~~~~~i~lV~E~~~--gdL~~~i~~~~~lse~~~~~i~~Qll~aL~y-LHs~gIiHrDLKP~NILl~~~~~lKL~ 168 (560)
.-+|||||++ |.....+... .++.+....++.+++..+.. +|..||+|+||.+.|||++.+ .+.|+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~-~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDV-DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHC-GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE-
T ss_pred ---------CCEEEEEecCCCccchhhHHhc-cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEE
Confidence 1279999999 6322223222 12245667788888885555 589999999999999999988 99999
Q ss_pred cccccccc
Q 008607 169 DFGLARVA 176 (560)
Q Consensus 169 DFGla~~~ 176 (560)
|||.+...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99988643
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.74 E-value=1.2e-07 Score=91.47 Aligned_cols=143 Identities=16% Similarity=0.170 Sum_probs=101.9
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCc----ccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCc-CCCccEEEE
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDI----FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSR-REFKDIYVV 105 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~----~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~-~~~~~i~lV 105 (560)
-|+|+.+.|+.... .|..+-+|.-.+. .....-...+.+|+..|+.|..-+|.-..-++..... ...-.-+||
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEE
Confidence 35688888988743 3457888876421 1112234678899999999975444322112211111 112246899
Q ss_pred EecCCc--cHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCc--EEEeccccccc
Q 008607 106 FELMES--DLHQVIKAN--DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCK--LKICDFGLARV 175 (560)
Q Consensus 106 ~E~~~g--dL~~~i~~~--~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~--lKL~DFGla~~ 175 (560)
+|-++| +|.+++... .+.++.....++.++..+|+-||..|+.|+|+-+.|||++.++. ++++||.-++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 998885 899988663 24678888899999999999999999999999999999987777 99999987654
No 453
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.70 E-value=2.3e-07 Score=96.06 Aligned_cols=266 Identities=18% Similarity=0.196 Sum_probs=162.8
Q ss_pred ccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhc-CCCCccccceee---
Q 008607 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLL-RHPDIVEIKHIL--- 91 (560)
Q Consensus 16 ~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l-~HpnIv~l~~i~--- 91 (560)
|..||+. ....+-||+|+-+.+|..- .-+. .+.|+....--. ... .-+..|... .||.+-. --+|
T Consensus 6 ~~~~ge~--i~~gr~LgqGgea~ly~l~--e~~d-~VAKIYh~Pppa--~~a---qk~a~la~~p~~p~~~~-rvaWPqa 74 (637)
T COG4248 6 YDVYGEP--IPPGRPLGQGGEADLYTLG--EVRD-QVAKIYHAPPPA--AQA---QKVAELAATPDAPLLNY-RVAWPQA 74 (637)
T ss_pred ccccCcc--cCCCccccCCccceeeecc--hhhc-hhheeecCCCch--HHH---HHHHHhccCCCCcchhh-hhcccHH
Confidence 4455544 4556789999999999762 2222 344665532111 111 112223322 3554322 1111
Q ss_pred -cCCCcCCCccEEEEEecCCc--cHHHHHHh---C---CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCC
Q 008607 92 -LPPSRREFKDIYVVFELMES--DLHQVIKA---N---DDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANAD 162 (560)
Q Consensus 92 -~~~~~~~~~~i~lV~E~~~g--dL~~~i~~---~---~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~ 162 (560)
+... +...-+-+.|..+.| .+..++.. + ....++...+..+.|+.|.+.||..|-.-+|+.++|+|+.++
T Consensus 75 ~L~G~-~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~ 153 (637)
T COG4248 75 TLHGG-RRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD 153 (637)
T ss_pred HhhCC-CccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC
Confidence 1111 222337888988886 45555432 1 247789999999999999999999999999999999999999
Q ss_pred CcEEEecccccccccCCCCCcccccccccCcccccccccc-ccc--CCCCCccchhhHHHHHHHHhhC-CCCCCCCChhh
Q 008607 163 CKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCG-SFF--SKYTPAIDIWSIGCIFAELLTG-KPLFPGKNVVH 238 (560)
Q Consensus 163 ~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~-~~~--~~y~~~~DIWSlG~il~eLltG-~~pF~~~~~~~ 238 (560)
+.|.|.|=..-.+..++ ..+..-+|...|.+||+-. +.+ ..-+...|.|.||+++|+||.| +.||.|-..
T Consensus 154 ~~V~LVdsDsfqi~~ng----~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~-- 227 (637)
T COG4248 154 SKVVLVDSDSFQINANG----TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPL-- 227 (637)
T ss_pred ceEEEEcccceeeccCC----ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccc--
Confidence 99999985543332222 2334568999999999743 211 1345678999999999999997 899987321
Q ss_pred HHHHHHHhcCCCC--HHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhccc--CCCCCCCHHH
Q 008607 239 QLDIMTDLLGTPS--PEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAF--EPKDRPTAEE 309 (560)
Q Consensus 239 ~~~~i~~~~g~p~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~--DP~~Rpta~e 309 (560)
....|. ...|....-..+. +.-+..++.+..--|.-+++.+..|..+|+.. ++.-|||++-
T Consensus 228 -------~~~ap~p~E~~Ia~g~f~ya~---~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a 292 (637)
T COG4248 228 -------ISDAPNPLETDIAHGRFAYAS---DQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA 292 (637)
T ss_pred -------cCCCCCcchhhhhcceeeech---hccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence 111111 1122211111111 11223344444445556788999999999975 3568999764
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.67 E-value=9.6e-08 Score=94.45 Aligned_cols=137 Identities=27% Similarity=0.258 Sum_probs=98.7
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecC-------cc---------cChh----HHHHHHHHHHHHHhcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND-------IF---------EHVS----DATRILREIKLLRLLRHP 82 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~-------~~---------~~~~----~~~~i~rEi~iL~~l~Hp 82 (560)
.-+.+...||-|--|.||.|.+. .|.++|||.=+. .. .+.+ ......+|.++|..|...
T Consensus 91 ~ve~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~ 169 (304)
T COG0478 91 IVEAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPE 169 (304)
T ss_pred hHHhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhc
Confidence 34567789999999999999875 789999996320 00 1111 123457899999998754
Q ss_pred --CccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeee
Q 008607 83 --DIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159 (560)
Q Consensus 83 --nIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl 159 (560)
.+.+.++. +.-.+|||+++| .|...- ++.+....++..|++-+.-+-..||+|+|+++=|||+
T Consensus 170 G~~VP~P~~~---------nRHaVvMe~ieG~eL~~~r-----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV 235 (304)
T COG0478 170 GVKVPKPIAW---------NRHAVVMEYIEGVELYRLR-----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILV 235 (304)
T ss_pred CCCCCCcccc---------ccceeeeehcccceeeccc-----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEE
Confidence 44444332 234899999998 333321 2344555667777777777779999999999999999
Q ss_pred CCCCcEEEecccccc
Q 008607 160 NADCKLKICDFGLAR 174 (560)
Q Consensus 160 ~~~~~lKL~DFGla~ 174 (560)
+++|.+.++||-.+.
T Consensus 236 ~~dg~~~vIDwPQ~v 250 (304)
T COG0478 236 TEDGDIVVIDWPQAV 250 (304)
T ss_pred ecCCCEEEEeCcccc
Confidence 999999999998664
No 455
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.55 E-value=7.8e-07 Score=86.29 Aligned_cols=143 Identities=20% Similarity=0.275 Sum_probs=89.8
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhH-HH------HHHHHHHHHHhcCCCCccccceeecC-
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSD-AT------RILREIKLLRLLRHPDIVEIKHILLP- 93 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~-~~------~i~rEi~iL~~l~HpnIv~l~~i~~~- 93 (560)
.+.|++.+++-......|.+. ...|+.+++|..+........ .. ...+++..+..++...+..+-+.++.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 467899999988887777666 467899999987642211110 01 12344444444443333332222211
Q ss_pred --CCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecc
Q 008607 94 --PSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDF 170 (560)
Q Consensus 94 --~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DF 170 (560)
....-....+|||||++| .|.+.. .++++ +.-.|..++.-||+.|++|+|..|.|++++.++ ++++||
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~----~i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~ 178 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIE----DIDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDT 178 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccch----hcCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEEC
Confidence 111111245689999998 554432 13332 445677889999999999999999999998654 999999
Q ss_pred ccccc
Q 008607 171 GLARV 175 (560)
Q Consensus 171 Gla~~ 175 (560)
+..+.
T Consensus 179 ~~k~~ 183 (229)
T PF06176_consen 179 QGKRM 183 (229)
T ss_pred ccccc
Confidence 86643
No 456
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.35 E-value=2.2e-06 Score=98.57 Aligned_cols=204 Identities=18% Similarity=0.234 Sum_probs=140.7
Q ss_pred HHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Q 008607 69 ILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANV 147 (560)
Q Consensus 69 i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gI 147 (560)
..-|+..+..++|+|++.++.+-+..-... -.+.+..++|.+ ++...+..-+.++.+.++.+..++++||+|+|+...
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g-~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l 307 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRG-IVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL 307 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcch-HHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence 445777788889999999988765432111 123345577775 888888888889999999999999999999999977
Q ss_pred eeccCCCC---CeeeCCCCcEEEe--cccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHH
Q 008607 148 FHRDLKPK---NILANADCKLKIC--DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFA 222 (560)
Q Consensus 148 iHrDLKP~---NILl~~~~~lKL~--DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~ 222 (560)
.|.-|.-. +..++..+.+.+. ||+........... ........+.++|.+...........|+|++|..+.
T Consensus 308 ~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~----~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~ 383 (1351)
T KOG1035|consen 308 EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKS----FSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLL 383 (1351)
T ss_pred ceeEEecccccccccCccceeecchhhhcccccCCCcccc----hhhcCccccccccccccccchhhhhhHHHHHHHHHh
Confidence 66666555 5556667777777 88877654322211 223445567788887652222233479999999999
Q ss_pred HHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCH-HHHHHHHHhcccCC
Q 008607 223 ELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANP-LALRLLERMLAFEP 301 (560)
Q Consensus 223 eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~-~~~dLI~~mL~~DP 301 (560)
.+..|..+-.... .+.. ..+..+. ...+++.+|+.-|+
T Consensus 384 ~~~~~~~i~~~~~------~~~~-----------------------------------~l~~~~~~~~~d~~~~~~~~~~ 422 (1351)
T KOG1035|consen 384 QLSQGEDISEKSA------VPVS-----------------------------------LLDVLSTSELLDALPKCLDEDS 422 (1351)
T ss_pred hhhhcCccccccc------chhh-----------------------------------hhccccchhhhhhhhhhcchhh
Confidence 9988874321100 0000 0011111 56789999999999
Q ss_pred CCCCCHHHHhcCccccc
Q 008607 302 KDRPTAEEALADPYFKG 318 (560)
Q Consensus 302 ~~Rpta~elL~hp~f~~ 318 (560)
++|+++.++|.|+|.+-
T Consensus 423 ~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 423 EERLSALELLTHPFLRF 439 (1351)
T ss_pred hhccchhhhhhchhccc
Confidence 99999999999999874
No 457
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.34 E-value=5.8e-06 Score=80.48 Aligned_cols=139 Identities=20% Similarity=0.218 Sum_probs=79.9
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC--ccccceeecCCCcCCCccEEEE
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~i~~~~~~~~~~~i~lV 105 (560)
++.|+.|..+.||.+.... ..+++|..... .....+.+|..+++.|.... +..++...... ......+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~----~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~--~~~~~~~~~ 73 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP----DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSD--EFNGFPYLL 73 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH----HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEET--EETSEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC----CCHHHHHHHHHHHHHHHhcCCCCceEEeecccc--cccccceEE
Confidence 5779999999999997655 49999987532 35567889999999886443 33444422111 122247999
Q ss_pred EecCCc-cHHH----------------HHH---hC----CCCCHHH------HHHH---------------HHHHHH-HH
Q 008607 106 FELMES-DLHQ----------------VIK---AN----DDLTPEH------YQFF---------------LYQLLR-GL 139 (560)
Q Consensus 106 ~E~~~g-dL~~----------------~i~---~~----~~lse~~------~~~i---------------~~Qll~-aL 139 (560)
|++++| .+.. .+. .. ..+.... ...+ ...+.. .+
T Consensus 74 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (239)
T PF01636_consen 74 MEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLL 153 (239)
T ss_dssp EEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred EEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHH
Confidence 999997 4444 111 11 0111000 0000 111222 33
Q ss_pred HHHH-------hCCeeeccCCCCCeeeC-CCCcEEEecccccc
Q 008607 140 KYIH-------TANVFHRDLKPKNILAN-ADCKLKICDFGLAR 174 (560)
Q Consensus 140 ~yLH-------s~gIiHrDLKP~NILl~-~~~~lKL~DFGla~ 174 (560)
..++ ...++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus 154 ~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 154 QELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 3333 24599999999999999 66777899999764
No 458
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.29 E-value=1.6e-06 Score=94.81 Aligned_cols=151 Identities=21% Similarity=0.311 Sum_probs=91.5
Q ss_pred CCcccccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcc----------------------cC-----h
Q 008607 11 ADVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF----------------------EH-----V 63 (560)
Q Consensus 11 ~~~~~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~----------------------~~-----~ 63 (560)
+--+.|.+|+. +-|+.++-|.||.|+-+ +|+.||||+.+-.. .. .
T Consensus 120 ~iee~F~eF~~-------~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~ 191 (517)
T COG0661 120 PIEELFSEFEP-------EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDL 191 (517)
T ss_pred CHHHHHHHcCC-------CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCCh
Confidence 33456777774 66999999999999865 49999999874210 00 0
Q ss_pred -hH----HHH------HHHHHHHHHhcC----CCCccccceeecCCCcCCCccEEEEEecCCc-cHHHH--HHhCCCCCH
Q 008607 64 -SD----ATR------ILREIKLLRLLR----HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV--IKANDDLTP 125 (560)
Q Consensus 64 -~~----~~~------i~rEi~iL~~l~----HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~--i~~~~~lse 125 (560)
.. .+. +.+|...+..++ ...-+.+=.+|..-+ ..-.|+|||++| .+.+. +++ ..++.
T Consensus 192 ~~vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t----~~~VLtmE~i~Gi~i~d~~~l~~-~g~d~ 266 (517)
T COG0661 192 VEVVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYT----TRRVLTMEWIDGIKISDIAALKS-AGIDR 266 (517)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhcc----CCcEEEEEeeCCEecccHHHHHh-cCCCH
Confidence 00 011 234444444442 222233334443211 234899999998 45544 444 33553
Q ss_pred HHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 126 EHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 126 ~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+...+.++. +..+=..|++|.|..|.||+++.+|++-+.|||+....
T Consensus 267 k~ia~~~~~~f--~~q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 267 KELAELLVRAF--LRQLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HHHHHHHHHHH--HHHHHhcCccccCCCccceEEecCCcEEEEcCcceecC
Confidence 33322222211 12222379999999999999999999999999987543
No 459
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.29 E-value=9.2e-06 Score=80.13 Aligned_cols=132 Identities=18% Similarity=0.183 Sum_probs=77.9
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCc--cccceeecCCCcCCCccEEEEE
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDI--VEIKHILLPPSRREFKDIYVVF 106 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnI--v~l~~i~~~~~~~~~~~i~lV~ 106 (560)
..||.|..+.||+. .|..+++|..... .....+.+|.++++.+..-.+ .+++++.... ....+||
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~----~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~-----~~~glv~ 73 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPG----FDKETIKREFDASRKVFSLGIPTPHPFDLVEDG-----GRLGLIY 73 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecC-----Ceeeeee
Confidence 56899999999984 2557888877531 233457889999998864333 4445444222 2367899
Q ss_pred ecCCcc--HHHHH---------------------HhC--CCCCHHH-HHHHHHH----------HHHH-HHHHH----hC
Q 008607 107 ELMESD--LHQVI---------------------KAN--DDLTPEH-YQFFLYQ----------LLRG-LKYIH----TA 145 (560)
Q Consensus 107 E~~~gd--L~~~i---------------------~~~--~~lse~~-~~~i~~Q----------ll~a-L~yLH----s~ 145 (560)
|+++|. +...+ ..- ....... ...+..+ +... ..+|. ..
T Consensus 74 e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~ 153 (226)
T TIGR02172 74 ELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTS 153 (226)
T ss_pred eecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCC
Confidence 999983 11111 100 0111110 1111101 1111 12222 12
Q ss_pred CeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 146 NVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 146 gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.++|+|+.|.||+++.++ +.|+||+.+.
T Consensus 154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence 478999999999999988 9999999774
No 460
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.24 E-value=9.5e-06 Score=79.73 Aligned_cols=143 Identities=22% Similarity=0.180 Sum_probs=92.6
Q ss_pred CCceEEEEE---EeecCCeEEEEEEECCCCcEEEEEEecCccc--------------------ChhHH--HHHHHHHHHH
Q 008607 22 GSRYKIEEV---IGKGSYGVVCSAYDTRTGEKVAIKKINDIFE--------------------HVSDA--TRILREIKLL 76 (560)
Q Consensus 22 ~~~Y~i~~~---IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~--------------------~~~~~--~~i~rEi~iL 76 (560)
.++..+.+. |+.|--+.||+|.. ..+..+|+|+++.... +.... .-..+|..-|
T Consensus 44 ~~rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL 122 (268)
T COG1718 44 LSRGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNL 122 (268)
T ss_pred hcCCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHH
Confidence 344544444 55666668999863 5688999998852110 00011 1124567777
Q ss_pred HhcCC--CCccccceeecCCCcCCCccEEEEEecCCccH--HHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh-CCeeecc
Q 008607 77 RLLRH--PDIVEIKHILLPPSRREFKDIYVVFELMESDL--HQVIKANDDLTPEHYQFFLYQLLRGLKYIHT-ANVFHRD 151 (560)
Q Consensus 77 ~~l~H--pnIv~l~~i~~~~~~~~~~~i~lV~E~~~gdL--~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs-~gIiHrD 151 (560)
+.+.. -.+.+-+.+. .-.|||||++.+. .-.++ .-.+..+....+..++++.+.-|-. .+++|+|
T Consensus 123 ~R~~eAGVrvP~Pi~~~---------~nVLvMEfIg~~g~pAP~Lk-Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgD 192 (268)
T COG1718 123 KRAYEAGVRVPEPIAFR---------NNVLVMEFIGDDGLPAPRLK-DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGD 192 (268)
T ss_pred HHHHHcCCCCCCceeec---------CCeEEEEeccCCCCCCCCcc-cCCcCchhHHHHHHHHHHHHHHHHHhcCccccc
Confidence 76642 2333333322 3489999998541 00111 1123444788888999999998876 9999999
Q ss_pred CCCCCeeeCCCCcEEEecccccccc
Q 008607 152 LKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 152 LKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
|+.=|||+. ++.+.|+|||.|...
T Consensus 193 LSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 193 LSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred chhhheEEE-CCeEEEEECcccccc
Confidence 999999999 889999999988643
No 461
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.11 E-value=1.3e-05 Score=74.90 Aligned_cols=129 Identities=22% Similarity=0.310 Sum_probs=91.4
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYV 104 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~l 104 (560)
-++.+.|++|.+|+||++. ..|..+|+|+-+ ..+....+..|.++|..+.-.++..=+-.+ . ..++
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~--~~~~~~a~Kvrr----~ds~r~~l~kEakiLeil~g~~~~p~vy~y-g-------~~~i 89 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGE--WRGGEVALKVRR----RDSPRRNLEKEAKILEILAGEGVTPEVYFY-G-------EDFI 89 (201)
T ss_pred hhhhhhhhcccccEEEEee--ccCceEEEEEec----CCcchhhHHHHHHHHHHhhhcCCCceEEEe-c-------hhhh
Confidence 4567889999999999995 567799999764 234556788899999999866665432222 1 1356
Q ss_pred EEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC-CC-CeeeCCCCcEEEeccccccc
Q 008607 105 VFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLK-PK-NILANADCKLKICDFGLARV 175 (560)
Q Consensus 105 V~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLK-P~-NILl~~~~~lKL~DFGla~~ 175 (560)
.|||+.| .|..+.... +. +-+..++++---|-..||-|+.|. |. ||+++ ++.+.|+||..|+.
T Consensus 90 ~me~i~G~~L~~~~~~~---~r----k~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~-~~~~~iIDFd~At~ 155 (201)
T COG2112 90 RMEYIDGRPLGKLEIGG---DR----KHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVN-DRDVYIIDFDSATF 155 (201)
T ss_pred hhhhhcCcchhhhhhcc---cH----HHHHHHHHHHHHHHHhccchhhhcCCceeEEec-CCcEEEEEccchhh
Confidence 7999998 676654321 22 234556666566778899999998 44 55555 45999999998874
No 462
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.10 E-value=8.6e-07 Score=96.19 Aligned_cols=243 Identities=16% Similarity=0.132 Sum_probs=159.9
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC-ccccceeecCCCcCCCccEE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD-IVEIKHILLPPSRREFKDIY 103 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn-Iv~l~~i~~~~~~~~~~~i~ 103 (560)
|....-.++|+++.+++++...+...+ .+++... ..+.-++++|.+++||| .+..++ +.+...+.+
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~-h~fvs~~-------l~~rl~~eLLdK~n~P~~~v~~~~-----d~~~E~~~~ 310 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-------LSRRLAIELLDKVNNPNPVVRYLE-----DYDGEDYLW 310 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc-------hhhHHHHHHHHHccCCCCcccccc-----cCCcccccc
Confidence 344455789999999999877766655 6666431 33345899999999999 333222 334445789
Q ss_pred EEEecCCcc--HHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEecccccccccCCC
Q 008607 104 VVFELMESD--LHQVIK-ANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 180 (560)
Q Consensus 104 lV~E~~~gd--L~~~i~-~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~ 180 (560)
++++++++. ....+. ..-.+.+-+...+.+.-+++|+++|+.-=+|+| |||..+ +..|+.||+.+..+....
T Consensus 311 i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~ 385 (829)
T KOG0576|consen 311 IPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM 385 (829)
T ss_pred hhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----cccccc-cccccccccCCcccCccc
Confidence 999999853 111111 111244455666777888999999998778998 777655 689999999887664433
Q ss_pred CCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHHhhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhh
Q 008607 181 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRN 260 (560)
Q Consensus 181 ~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eLltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~ 260 (560)
......+|+.++|||+... ..+..+.|.|++|+--.+|--|-+|-...- .... ..|..... .
T Consensus 386 ----~~~t~~~~~~~~~pev~~~--~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~----~~g~~p~s--~---- 447 (829)
T KOG0576|consen 386 ----KPRTAIGTPEPLAPEVIQE--NTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLP----MIGNGPNS--P---- 447 (829)
T ss_pred ----ccccCCCCCCCCCchhhcc--cccccCCCccCCCcchhhcCCCCCCCCCCc--cccC----CCCCCCCc--c----
Confidence 2256789999999998876 578889999999987777777776643310 0000 00100000 0
Q ss_pred HHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCCCCHHHHhcCcccccc
Q 008607 261 EKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDRPTAEEALADPYFKGL 319 (560)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~Rpta~elL~hp~f~~~ 319 (560)
.+.. ...|...+. .++...||..-|..|++..+++-|.+|.+-
T Consensus 448 --------~L~~--~~aw~~~~~------~~~~~~~~~g~P~~pkv~mgacfsKvfngC 490 (829)
T KOG0576|consen 448 --------MLTD--KSAWSPVFH------RDFPAPCLNGLPPTPKVHMGACFSKVFNGC 490 (829)
T ss_pred --------ccch--hhhcCcccc------cCCcccccCCCCCCCcchhhHHHHHHhccC
Confidence 0000 011111111 147788999999999999999999999864
No 463
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.98 E-value=6.3e-05 Score=74.71 Aligned_cols=133 Identities=12% Similarity=0.058 Sum_probs=75.5
Q ss_pred EEeecCC-eEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCccccceeecCCCcCCCccEEEEEe
Q 008607 30 VIGKGSY-GVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDIVEIKHILLPPSRREFKDIYVVFE 107 (560)
Q Consensus 30 ~IG~G~~-G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnIv~l~~i~~~~~~~~~~~i~lV~E 107 (560)
.|..|.+ ..||++.. .+..+.||...... ...+.+|+.+++.+. +--+.+++...... ..-++|||
T Consensus 5 ~~~~g~~~~~v~~~~~--~~~~~~vk~~~~~~-----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~-----~~~~lv~e 72 (244)
T cd05150 5 RVTEGQSGATVYRLDG--KNPGLYLKIAPSGP-----TYELEREAERLRWLAGKLPVPEVIDYGSDD-----GRAWLLTS 72 (244)
T ss_pred ecCCCCCcCeEEEEcC--CCCcEEEEecCCCc-----ccchHHHHHHHHHHHhcCCCCeEEEEEecC-----CccEEEEE
Confidence 3555555 78899854 34678888765321 335678999998885 32333445444221 24689999
Q ss_pred cCCc-cHHHH----------------HHhCC-------CCCHH---HHHHH---H----------------HHHHHHHHH
Q 008607 108 LMES-DLHQV----------------IKAND-------DLTPE---HYQFF---L----------------YQLLRGLKY 141 (560)
Q Consensus 108 ~~~g-dL~~~----------------i~~~~-------~lse~---~~~~i---~----------------~Qll~aL~y 141 (560)
+++| .|... +.+-. .+... ..... + ..+...+..
T Consensus 73 ~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (244)
T cd05150 73 AVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAE 152 (244)
T ss_pred eeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHH
Confidence 9987 33322 11100 11100 00000 0 001111222
Q ss_pred H-------HhCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 142 I-------HTANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 142 L-------Hs~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
| ....++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 153 l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 153 LEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred HHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 2 12348999999999999998778999999763
No 464
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.97 E-value=4.3e-05 Score=73.41 Aligned_cols=143 Identities=26% Similarity=0.327 Sum_probs=97.6
Q ss_pred CCCcccccccCCCCceEEEEEEeecCC-eEEEEEEECCCCcEEEEEEecC-----------cccC-h-------hHHHHH
Q 008607 10 SADVDFFTEYGEGSRYKIEEVIGKGSY-GVVCSAYDTRTGEKVAIKKIND-----------IFEH-V-------SDATRI 69 (560)
Q Consensus 10 ~~~~~~~~~~~~~~~Y~i~~~IG~G~~-G~Vy~a~d~~tg~~vAiK~i~~-----------~~~~-~-------~~~~~i 69 (560)
.+-++-|+-. +..++.++.||.|.- |.||++. -.|+.||||.+.. .+.. . .....|
T Consensus 26 gPKL~~F~~h--~~~I~flefLg~g~~~~~V~kv~--I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF 101 (207)
T PF13095_consen 26 GPKLEPFTHH--GDDIEFLEFLGHGSHDGYVFKVE--IDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPF 101 (207)
T ss_pred CCCcCCcCCC--CCcEeeeeecCCCCceeEEEEEE--ECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChH
Confidence 3455656663 388999999999999 9999995 5688999999421 0000 0 112346
Q ss_pred HHHHHHHHhcC---CCCc--cccceeecCCCc-------------CCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHH
Q 008607 70 LREIKLLRLLR---HPDI--VEIKHILLPPSR-------------REFKDIYVVFELMESDLHQVIKANDDLTPEHYQFF 131 (560)
Q Consensus 70 ~rEi~iL~~l~---HpnI--v~l~~i~~~~~~-------------~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i 131 (560)
..|.+..-.|+ +.++ |++++++.-... .......||.||+...- .++...
T Consensus 102 ~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------~~~~~~---- 169 (207)
T PF13095_consen 102 NCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------PLQIRD---- 169 (207)
T ss_pred HHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------ccchhH----
Confidence 77877766554 5566 888887643210 11123468888887532 233333
Q ss_pred HHHHHHHHHHHHhCCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 132 LYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 132 ~~Qll~aL~yLHs~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
+.+|++-|..+|..||+-+|+++.|.. .-||+|||.+
T Consensus 170 ~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 170 IPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence 567888899999999999999999986 2489999964
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.91 E-value=0.0001 Score=86.20 Aligned_cols=146 Identities=16% Similarity=0.284 Sum_probs=88.7
Q ss_pred EEEEEeecCCeEEEEEEECCCC--cEEEEEEecCcccChhHHHHHHHHHHHHHhcC-CCCc--cccceeecCCCcCCCcc
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTG--EKVAIKKINDIFEHVSDATRILREIKLLRLLR-HPDI--VEIKHILLPPSRREFKD 101 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg--~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~-HpnI--v~l~~i~~~~~~~~~~~ 101 (560)
-++.|+.|.++.+|+......+ ..+++|+..... .......+.+|+.+|+.|. |.++ .+++..+.+. .....
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~-~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~--~v~G~ 118 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGK-LLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDA--SVIGT 118 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCc-cCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCC--CcCCC
Confidence 3577899999999998765432 468888764321 1123446789999999996 6664 5555544322 22235
Q ss_pred EEEEEecCCccH-H--------------------HHHH---hCC----C---------CCHHHHHHHHHH----------
Q 008607 102 IYVVFELMESDL-H--------------------QVIK---AND----D---------LTPEHYQFFLYQ---------- 134 (560)
Q Consensus 102 i~lV~E~~~gdL-~--------------------~~i~---~~~----~---------lse~~~~~i~~Q---------- 134 (560)
.|+||||++|.. . +.+. .-. . .-..++..|..+
T Consensus 119 ~flVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~ 198 (822)
T PLN02876 119 AFYIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKP 198 (822)
T ss_pred ceEEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCC
Confidence 689999999742 1 0111 100 0 111233333222
Q ss_pred -----HHHHHHHHHh-----------CCeeeccCCCCCeeeCCC-Cc-EEEeccccccc
Q 008607 135 -----LLRGLKYIHT-----------ANVFHRDLKPKNILANAD-CK-LKICDFGLARV 175 (560)
Q Consensus 135 -----ll~aL~yLHs-----------~gIiHrDLKP~NILl~~~-~~-lKL~DFGla~~ 175 (560)
+...+.+|.. ..++|+|+++.|||++.+ +. +-|.||+++..
T Consensus 199 ~~~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~ 257 (822)
T PLN02876 199 PRNPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL 257 (822)
T ss_pred CCChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence 2233566632 249999999999999853 33 58999999875
No 466
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=97.85 E-value=8.6e-05 Score=79.41 Aligned_cols=176 Identities=26% Similarity=0.369 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHh
Q 008607 65 DATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHT 144 (560)
Q Consensus 65 ~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs 144 (560)
....++--..+|+.+.|+|....+++..... ....+|+|+++.+|.+..+.+. +-.... + .
T Consensus 25 ~s~~ilgr~~~lktl~~~~l~~yl~~~r~~~----~r~IVV~e~~~~Sled~~~~~~-l~~~s~-------~-------~ 85 (725)
T KOG1093|consen 25 NSIQILGRFQYLKSLQHDNLCQYLDFSRGKH----ERVIVVMEHYTMSLEDILKTGN-LKDESL-------L-------A 85 (725)
T ss_pred cHHHHhhhhHHHHhhcCccceeeEeeecCcc----ceEEEEehhhccchHHHHHhcc-cchhhh-------c-------c
Confidence 4456677788999999999999888663322 2378999999999999987764 221111 1 2
Q ss_pred CCeeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHHHHHHH
Q 008607 145 ANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEL 224 (560)
Q Consensus 145 ~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~il~eL 224 (560)
+|+.|- | .++++| -++ +. | | ....+++||||+|.++.++
T Consensus 86 ~~~~~~-----~-------~~~~td-~~~-------------t~------~--~-------~~~~pKsdVwsl~~i~~el 124 (725)
T KOG1093|consen 86 HGVLHL-----N-------IIYITD-HFL-------------TK------Y--P-------SPIGPKSDVWSLGFIILEL 124 (725)
T ss_pred ccccee-----h-------hhhccc-ccc-------------cc------C--C-------CCCCcchhhhhHHHHHHHH
Confidence 222221 2 233333 110 00 0 1 1122599999999999999
Q ss_pred hhCCCCCCCCChhhHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHHHHhcccCCCCC
Q 008607 225 LTGKPLFPGKNVVHQLDIMTDLLGTPSPEAIARVRNEKARRYLSSMRKKKPIPFSQKFPNANPLALRLLERMLAFEPKDR 304 (560)
Q Consensus 225 ltG~~pF~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~s~~~~dLI~~mL~~DP~~R 304 (560)
..|...|......+++..|.++...+.....-.... .+. -.++....+++++|+-..|..|
T Consensus 125 ~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~-----~~~--------------~~~d~~~~~~~~~c~~~~~~ir 185 (725)
T KOG1093|consen 125 YLGISLEAELTESEYLEILLKYYTDDQELLSTAMEH-----LIQ--------------LLADKKRLPLLKKCLWLEPIIR 185 (725)
T ss_pred HHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHH-----HHH--------------HhhhHhHHHHhccCCccccccc
Confidence 999999999888888888887765554332221111 000 1345667889999999999999
Q ss_pred CCHHHHhcCcccccc
Q 008607 305 PTAEEALADPYFKGL 319 (560)
Q Consensus 305 pta~elL~hp~f~~~ 319 (560)
|...++..++-|...
T Consensus 186 ~l~~~~~k~~i~~ev 200 (725)
T KOG1093|consen 186 PLPMELSKRCSFTEV 200 (725)
T ss_pred cchhHHhcCccHHHH
Confidence 999999999999765
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.81 E-value=0.00014 Score=72.02 Aligned_cols=30 Identities=33% Similarity=0.482 Sum_probs=25.6
Q ss_pred CCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 145 ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 145 ~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.+++|+|+.+.|||++.++..-|+||+.+.
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~ 193 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG 193 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence 358999999999999877666799999764
No 468
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.77 E-value=0.0004 Score=67.03 Aligned_cols=128 Identities=20% Similarity=0.251 Sum_probs=89.8
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcc--------------cChhHHHHHHHHHHHHHhcC------CCCccccc
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIF--------------EHVSDATRILREIKLLRLLR------HPDIVEIK 88 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~--------------~~~~~~~~i~rEi~iL~~l~------HpnIv~l~ 88 (560)
..||+|+.-.||.- .......||++.... ..........+|+.....+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~H---P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH---PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC---CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46899999999854 334556888886432 11223456777888777776 77889999
Q ss_pred eeecCCCcCCCccEEEEEecCC---c----cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeeeCC
Q 008607 89 HILLPPSRREFKDIYVVFELME---S----DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANA 161 (560)
Q Consensus 89 ~i~~~~~~~~~~~i~lV~E~~~---g----dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl~~ 161 (560)
++..+. ...-+|+|.+. | +|.+++... .+++ .+ ...|-+-.+||-+++|+.+||+|.||++..
T Consensus 84 G~veT~-----~G~Glv~e~I~d~dG~~s~TL~~~l~~~-~~~~-~~---~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 84 GFVETN-----LGLGLVVELIRDADGNISPTLEDYLKEG-GLTE-EL---RQALDEFKRYLLDHHIVIRDLNPHNIVVQR 153 (199)
T ss_pred EEEecC-----CceEEEEEEEECCCCCcCccHHHHHHcC-CccH-HH---HHHHHHHHHHHHHcCCeecCCCcccEEEEe
Confidence 988554 34788888874 3 688888554 4666 33 333444567888999999999999999865
Q ss_pred CC----cEEEec
Q 008607 162 DC----KLKICD 169 (560)
Q Consensus 162 ~~----~lKL~D 169 (560)
+. .+.|+|
T Consensus 154 ~~~~~~~lvlID 165 (199)
T PF10707_consen 154 RDSGEFRLVLID 165 (199)
T ss_pred cCCCceEEEEEe
Confidence 42 577777
No 469
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.70 E-value=2.1e-05 Score=92.54 Aligned_cols=154 Identities=18% Similarity=0.107 Sum_probs=114.2
Q ss_pred HHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCC-ccHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHh
Q 008607 70 LREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELME-SDLHQVIKAND----DLTPEHYQFFLYQLLRGLKYIHT 144 (560)
Q Consensus 70 ~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~-gdL~~~i~~~~----~lse~~~~~i~~Qll~aL~yLHs 144 (560)
+.|...++...|+++.....-..+ .+....|.+++|+. |+++.+|.++- .+.+.-+.....+.+.+..-+|+
T Consensus 1277 l~e~de~~~~~h~~~~~~p~rI~p---s~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1277 LSERDELREAKHYLTEVDPLRIPP---SESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred hhhhhhhhhhhceeeecccccCCC---CCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhh
Confidence 345555666789988765554322 22345689999998 69999987642 34444444444554777888776
Q ss_pred CC-----eeeccCCCCCeeeCCCCcEEEecccccccccCCCCCcccccccccCcccccccccccccCCCCCccchhhHHH
Q 008607 145 AN-----VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 219 (560)
Q Consensus 145 ~g-----IiHrDLKP~NILl~~~~~lKL~DFGla~~~~~~~~~~~~~~~~~gT~~Y~APEll~~~~~~y~~~~DIWSlG~ 219 (560)
.. .+|++||+-|.+|..+..+|++++|+.+...+. ..+....++++.|+.|++... -.++.++|+|..||
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~---~sf~Gl~l~sp~~v~qli~N~--ik~t~rsdilr~s~ 1428 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV---LSFFGLELCSPIYVLQLIKNE--IKFTKRSDILRRSL 1428 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCcccccccccccccCch---HhhhhhhhCCHHHHHHHHHHH--HhhhhHHHHHHHHH
Confidence 52 689999999999999999999999999854322 233456778889999998866 46777799999999
Q ss_pred HHHHHhhCCCCC
Q 008607 220 IFAELLTGKPLF 231 (560)
Q Consensus 220 il~eLltG~~pF 231 (560)
-+|++..|..+|
T Consensus 1429 ~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1429 SLYLRSDGNAYF 1440 (2724)
T ss_pred HHHHHhcccHHH
Confidence 999999998776
No 470
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.70 E-value=0.00029 Score=77.24 Aligned_cols=139 Identities=25% Similarity=0.299 Sum_probs=84.3
Q ss_pred EEEeecCCeEEEEEEECCCCcEEEEEEecCcccCh-----------------------------hHHHH------HHHHH
Q 008607 29 EVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHV-----------------------------SDATR------ILREI 73 (560)
Q Consensus 29 ~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~-----------------------------~~~~~------i~rEi 73 (560)
+-||.-+.|.|++|+.+. |+.||||+-+...... .-... +.+|.
T Consensus 167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 569999999999999766 9999999864211110 00111 22333
Q ss_pred HHHH----hcCCCC---ccccceeecCCCcCCCccEEEEEecCCc----cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH
Q 008607 74 KLLR----LLRHPD---IVEIKHILLPPSRREFKDIYVVFELMES----DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI 142 (560)
Q Consensus 74 ~iL~----~l~Hpn---Iv~l~~i~~~~~~~~~~~i~lV~E~~~g----dL~~~i~~~~~lse~~~~~i~~Qll~aL~yL 142 (560)
+-.. .+.|-+ -|.+=.++..-+ ..-.|+||||+| || +.|.+.+ ++...+..-+.+... .-|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~s----t~RVLtME~~~G~~i~Dl-~~i~~~g-i~~~~i~~~l~~~~~--~qI 317 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLS----TKRVLTMEYVDGIKINDL-DAIDKRG-ISPHDILNKLVEAYL--EQI 317 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcC----cceEEEEEecCCccCCCH-HHHHHcC-CCHHHHHHHHHHHHH--HHH
Confidence 3322 223444 122333443221 135899999997 55 5555553 555543333222221 223
Q ss_pred HhCCeeeccCCCCCeeeCC----CCcEEEecccccccc
Q 008607 143 HTANVFHRDLKPKNILANA----DCKLKICDFGLARVA 176 (560)
Q Consensus 143 Hs~gIiHrDLKP~NILl~~----~~~lKL~DFGla~~~ 176 (560)
=..|++|+|=.|.||+++. ++.+.+-|||+....
T Consensus 318 f~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~i 355 (538)
T KOG1235|consen 318 FKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVI 355 (538)
T ss_pred HhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccc
Confidence 3468999999999999994 678999999998654
No 471
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.55 E-value=0.00068 Score=66.77 Aligned_cols=72 Identities=11% Similarity=0.178 Sum_probs=44.9
Q ss_pred EEEEeecCCeEEEEEEECC-CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcCCCccEEEE
Q 008607 28 EEVIGKGSYGVVCSAYDTR-TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRREFKDIYVV 105 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~-tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~i~~~~~~~~~~~i~lV 105 (560)
++.|..|-...+|++.... .++.|++|+...... ......+|+.+++.+...+++ +++... . -.+|
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~---~~~d~~~E~~~~~~l~~~gl~P~v~~~~--~-------~~~l 70 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTE---LIIDRERELRIHKLLSKHGLAPKLYATF--Q-------NGLI 70 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCcc---ceecHHHHHHHHHHHHhCCCCCeEEEEe--C-------CcEE
Confidence 4567889899999986433 357899997653211 112234799999988644443 333221 1 1479
Q ss_pred EecCCc
Q 008607 106 FELMES 111 (560)
Q Consensus 106 ~E~~~g 111 (560)
|||++|
T Consensus 71 ~e~i~G 76 (235)
T cd05157 71 YEFIPG 76 (235)
T ss_pred EEeeCC
Confidence 999986
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.53 E-value=0.00026 Score=67.82 Aligned_cols=97 Identities=23% Similarity=0.217 Sum_probs=77.6
Q ss_pred HHHHHHHhcCC-CCccccceeecCCCcCCCccEEEEEecCCc-cHHHH---HHhCCCCCHHHHHHHHHHHHHHHHHHHh-
Q 008607 71 REIKLLRLLRH-PDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQV---IKANDDLTPEHYQFFLYQLLRGLKYIHT- 144 (560)
Q Consensus 71 rEi~iL~~l~H-pnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~---i~~~~~lse~~~~~i~~Qll~aL~yLHs- 144 (560)
.|.-+|+.+++ +++.+++|.+ .-++|.||.+. .+... +..-..-++.....++.++++.+.+|+.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~C---------G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~ 78 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSC---------GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHG 78 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeEC---------CCEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC
Confidence 58889999986 6999999988 13678899883 44321 1111246799999999999999999987
Q ss_pred --CCeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 145 --ANVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 145 --~gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
..+.-.|++++|+-+++++++|++|...+...
T Consensus 79 ~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 79 PLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred CCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 45888999999999999999999999877543
No 473
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.50 E-value=0.00069 Score=69.84 Aligned_cols=150 Identities=17% Similarity=0.179 Sum_probs=86.6
Q ss_pred cccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC--ccccceeec
Q 008607 15 FFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILL 92 (560)
Q Consensus 15 ~~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~i~~ 92 (560)
++..|+.+ .....+.|+.|....+|++.. ++..+++|+.... .....+..|+++++.|.... +.+++.
T Consensus 15 ~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t--~~~~~vLK~~~~~----~~~~~i~~e~~~l~~L~~~g~pvp~~i~--- 84 (307)
T TIGR00938 15 FLDGYDLG-ELLSLKGIAEGVENSNYLLTT--DVGRYILTLYEKR----VKAEELPFFLALTTHLAARGLPVPKPVK--- 84 (307)
T ss_pred HHHhcCCC-CceeccccCCccccceEEEEe--CCCcEEEEEecCC----CCHHHHHHHHHHHHHHHHCCCCCCcccc---
Confidence 45556553 355577788888889998853 3446888876531 12345567888888885433 233322
Q ss_pred CCCc----CCCccEEEEEecCCcc-H-----H------HHH---Hh-CCCCC--------HHHHH---------------
Q 008607 93 PPSR----REFKDIYVVFELMESD-L-----H------QVI---KA-NDDLT--------PEHYQ--------------- 129 (560)
Q Consensus 93 ~~~~----~~~~~i~lV~E~~~gd-L-----~------~~i---~~-~~~ls--------e~~~~--------------- 129 (560)
+... ...+..++|++|++|. + . ..+ .. ...++ .....
T Consensus 85 t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~ 164 (307)
T TIGR00938 85 SRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEA 164 (307)
T ss_pred CCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCH
Confidence 1111 1124578999999861 1 1 111 10 01110 01000
Q ss_pred HHHHHHHHHHHHHHh-------CCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 130 FFLYQLLRGLKYIHT-------ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 130 ~i~~Qll~aL~yLHs-------~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.....+...++++.. .+++|+|+.+.||+++.++.+.|+||+.+.
T Consensus 165 ~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 165 HMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 001123334555542 589999999999999998877999999763
No 474
>PRK05231 homoserine kinase; Provisional
Probab=97.40 E-value=0.0013 Score=68.09 Aligned_cols=150 Identities=16% Similarity=0.130 Sum_probs=79.5
Q ss_pred ccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCC
Q 008607 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPS 95 (560)
Q Consensus 16 ~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~ 95 (560)
...|+.+ .-.-.+.|+.|....+|.... ++..+++|++.. .....+..|+.+++.|...++. +-.++.+.+
T Consensus 16 l~~y~~~-~~~~~~~l~~G~~n~~y~v~t--~~g~~vLK~~~~-----~~~~~l~~~~~~l~~L~~~glp-vP~~i~~~~ 86 (319)
T PRK05231 16 LAPYDLG-ELLSLKGIAEGIENSNFFLTT--TQGEYVLTLFER-----LTAEDLPFFLGLMQHLAARGVP-VPAPVARRD 86 (319)
T ss_pred HHhcCCc-hhhccchhccccccceEEEEe--CCCcEEEEEecc-----CChHHhHHHHHHHHHHHHCCCC-CCcceeCCC
Confidence 3456654 233345677888889998853 234789998751 1233445677777777533321 111121111
Q ss_pred c----CCCccEEEEEecCCcc-H-----------HHHHH----hCCCC--------C--H-HH-HH-----------HHH
Q 008607 96 R----REFKDIYVVFELMESD-L-----------HQVIK----ANDDL--------T--P-EH-YQ-----------FFL 132 (560)
Q Consensus 96 ~----~~~~~i~lV~E~~~gd-L-----------~~~i~----~~~~l--------s--e-~~-~~-----------~i~ 132 (560)
. ...+..++++++++|. + -+.+. ....+ . . .. .. ..+
T Consensus 87 G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 166 (319)
T PRK05231 87 GAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALL 166 (319)
T ss_pred CCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHH
Confidence 1 1123468999999873 1 11111 01111 0 0 00 00 111
Q ss_pred HHHH-HHHHHHH-------hCCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 133 YQLL-RGLKYIH-------TANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 133 ~Qll-~aL~yLH-------s~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.+.+ ..++.+. ..+++|+|+.|.|||++.+...-|+||+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 167 EAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1111 1122222 2379999999999999977666899999764
No 475
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.40 E-value=0.0029 Score=67.54 Aligned_cols=77 Identities=21% Similarity=0.192 Sum_probs=51.8
Q ss_pred EEEEeecCCeEEEEEEECCCCcEEEEEEecCc----ccC-hhHHHHHHHHHHHHHhcC---CCCccccceeecCCCcCCC
Q 008607 28 EEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI----FEH-VSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRREF 99 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~----~~~-~~~~~~i~rEi~iL~~l~---HpnIv~l~~i~~~~~~~~~ 99 (560)
.+.||.|.+..||++.+...++.|+||.-... ... .....+...|.+.|+.+. -..+.+++.+- .
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D--~----- 103 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYD--E----- 103 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEEC--C-----
Confidence 46799999999999998654468999984311 011 234567778999998874 23455555532 1
Q ss_pred ccEEEEEecCCc
Q 008607 100 KDIYVVFELMES 111 (560)
Q Consensus 100 ~~i~lV~E~~~g 111 (560)
...++|||++++
T Consensus 104 ~~~~lVME~L~~ 115 (401)
T PRK09550 104 ELAVTVMEDLSD 115 (401)
T ss_pred CCCEEEEecCCC
Confidence 235899999985
No 476
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.37 E-value=0.00065 Score=68.03 Aligned_cols=130 Identities=15% Similarity=0.236 Sum_probs=74.1
Q ss_pred EeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcCCCccEEEEEecC
Q 008607 31 IGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRREFKDIYVVFELM 109 (560)
Q Consensus 31 IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~i~~~~~~~~~~~i~lV~E~~ 109 (560)
+..|-.+.+|+.. .++..+++|......... .....+|..+|+.+....++ +++... . -++|+||+
T Consensus 4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~i~~~--~-------~~~v~e~i 70 (256)
T TIGR02721 4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKAL--GVDRQREYQILQALSALGLAPKPILVN--E-------HWLLVEWL 70 (256)
T ss_pred CCCcCcCCeEEEE--eCCccEEEeeCCcccccc--cCcHHHHHHHHHHHHhcCCCCceEEEe--C-------CEEEEEec
Confidence 5568888899885 557788898754321110 01245799999988754442 222221 1 26899999
Q ss_pred Cc-cHH--------------HHHHh---CC----CCCH-HHHHHHHHHH---------HHHHHHHHh--------CCeee
Q 008607 110 ES-DLH--------------QVIKA---ND----DLTP-EHYQFFLYQL---------LRGLKYIHT--------ANVFH 149 (560)
Q Consensus 110 ~g-dL~--------------~~i~~---~~----~lse-~~~~~i~~Ql---------l~aL~yLHs--------~gIiH 149 (560)
+| .+. +.+.+ .. .++. +.+..+..++ ...+..+-. ..++|
T Consensus 71 ~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H 150 (256)
T TIGR02721 71 EGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLH 150 (256)
T ss_pred cCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeec
Confidence 87 221 11111 10 1121 2222322222 111222221 25899
Q ss_pred ccCCCCCeeeCCCCcEEEecccccc
Q 008607 150 RDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 150 rDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
+|+.|.|||++.++ +.|+||+.|.
T Consensus 151 ~Dl~~~Nil~~~~~-~~lIDwE~a~ 174 (256)
T TIGR02721 151 MDVHAYNLVVTPQG-LKLIDWEYAS 174 (256)
T ss_pred CCCCcCcEEEeCCC-CEEEeccccC
Confidence 99999999999877 7899999774
No 477
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.24 E-value=0.0013 Score=67.28 Aligned_cols=150 Identities=17% Similarity=0.096 Sum_probs=84.9
Q ss_pred ccccCCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC--ccccceeecC
Q 008607 16 FTEYGEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLP 93 (560)
Q Consensus 16 ~~~~~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~i~~~ 93 (560)
+..|+.++ ..-.+.|..|....+|++.. .+..+++|+... .....+..|+.+++.|.+.+ +.+++... .
T Consensus 8 l~~y~~~~-~~~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~-----~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~-~ 78 (296)
T cd05153 8 LADYDLGE-LLSFEGISAGIENTNYFVTT--DSGRYVLTLFEK-----VSAEELPFFLALLDHLAERGLPVPRPIADR-D 78 (296)
T ss_pred HHHcCCCc-hhheecccCccccceEEEEe--CCCcEEEEEcCC-----CChHhccHHHHHHHHHHHCCCCCCccccCC-C
Confidence 34455432 23356677888889998843 345789998753 23455778899988886433 33332211 0
Q ss_pred CC--cCCCccEEEEEecCCc-cH--------HHH---H---Hh-CCCC----------CH--HHHH--------HHHHHH
Q 008607 94 PS--RREFKDIYVVFELMES-DL--------HQV---I---KA-NDDL----------TP--EHYQ--------FFLYQL 135 (560)
Q Consensus 94 ~~--~~~~~~i~lV~E~~~g-dL--------~~~---i---~~-~~~l----------se--~~~~--------~i~~Ql 135 (560)
.. ....+..++|+++++| .+ .++ + .. ...+ .+ .... .....+
T Consensus 79 g~~~~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 158 (296)
T cd05153 79 GEYLSELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALL 158 (296)
T ss_pred CcEeeeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHH
Confidence 00 0112346899999986 21 111 1 00 0001 00 0000 011122
Q ss_pred HHHHHHHHh-------CCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 136 LRGLKYIHT-------ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 136 l~aL~yLHs-------~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
..++.++.+ .+++|+|+.|.|||++.++.+.|+||+.+.
T Consensus 159 ~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 159 ADELARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred HHHHHHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 334444443 379999999999999998778999999763
No 478
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.16 E-value=0.002 Score=66.04 Aligned_cols=72 Identities=17% Similarity=0.137 Sum_probs=44.2
Q ss_pred EEEEeecCCeEEEEEEECC------CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc-ccceeecCCCcCCCc
Q 008607 28 EEVIGKGSYGVVCSAYDTR------TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPSRREFK 100 (560)
Q Consensus 28 ~~~IG~G~~G~Vy~a~d~~------tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~i~~~~~~~~~~ 100 (560)
++.|..|-...||++.... +++.+++|+..... .......+|+.+++.+....+. +++..+ ..
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~r~~E~~~~~~l~~~g~~P~~~~~~--~~----- 72 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV---ELLIDRERELVVFARLSERNLGPKLYGIF--PN----- 72 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC---cceechHHHHHHHHHHHhCCCCCceEEEe--CC-----
Confidence 3556668888899886433 36789999865321 2223456899999888644333 333333 11
Q ss_pred cEEEEEecCCc
Q 008607 101 DIYVVFELMES 111 (560)
Q Consensus 101 ~i~lV~E~~~g 111 (560)
.+|+||++|
T Consensus 73 --~~v~e~i~G 81 (302)
T cd05156 73 --GRIEEFIPS 81 (302)
T ss_pred --CchhheeCC
Confidence 357888775
No 479
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=97.15 E-value=0.0054 Score=63.37 Aligned_cols=145 Identities=18% Similarity=0.199 Sum_probs=83.3
Q ss_pred eEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc--ccceeecCCCcCCCccE
Q 008607 25 YKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV--EIKHILLPPSRREFKDI 102 (560)
Q Consensus 25 Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv--~l~~i~~~~~~~~~~~i 102 (560)
-.+++.+..|..-.+|...+. ++++++. ...............+|+.+|+.+.--.+. ..++++.... ....
T Consensus 27 ~~~v~~~~~G~sn~t~~~~~~--~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~---~g~p 100 (321)
T COG3173 27 LLIVEEISGGWSNDTFRLGDT--GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGY---LGTP 100 (321)
T ss_pred CceeeeccCCcccceEEEecC--CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCC---CCCc
Confidence 445565655555556666543 8888888 332223334556677899999877542222 2233332221 3457
Q ss_pred EEEEecCCc-cH------------------HHHHHh-------C-------CCCCHHHHHHHHHHH--------------
Q 008607 103 YVVFELMES-DL------------------HQVIKA-------N-------DDLTPEHYQFFLYQL-------------- 135 (560)
Q Consensus 103 ~lV~E~~~g-dL------------------~~~i~~-------~-------~~lse~~~~~i~~Ql-------------- 135 (560)
|.||++++| .+ .+++.. . +.+...++..+..+.
T Consensus 101 f~v~~~veGe~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~ 180 (321)
T COG3173 101 FYVMEWVEGEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLA 180 (321)
T ss_pred eEEEEEecceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchH
Confidence 999999998 11 111111 0 001111222222222
Q ss_pred HHHHHHHHhC--------CeeeccCCCCCeeeCCCCcEEEeccccccc
Q 008607 136 LRGLKYIHTA--------NVFHRDLKPKNILANADCKLKICDFGLARV 175 (560)
Q Consensus 136 l~aL~yLHs~--------gIiHrDLKP~NILl~~~~~lKL~DFGla~~ 175 (560)
..-..||+.+ .++|+|+.+.||+++.++.+=|.||+++..
T Consensus 181 ~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~l 228 (321)
T COG3173 181 DRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATL 228 (321)
T ss_pred HHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence 2223444433 489999999999999999999999999865
No 480
>PRK10593 hypothetical protein; Provisional
Probab=97.09 E-value=0.0069 Score=62.29 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=52.6
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCC---CCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH---PDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~H---pnIv~l~~i~~~~~~~~~~ 100 (560)
.-.-.+.||.|..+.||...+ ++.++++|..+. ......+.+|...|+.|.. -.+.++++++... ...+
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~--~~~~~~~k~~~~----~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~--~~~g 86 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYD--SQGNPMPLMARS----FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHE--QSPG 86 (297)
T ss_pred hhheeeecCCccceeEEEEEc--CCCCEEEEEecc----cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccC--CcCC
Confidence 344567899999999999843 233577776432 1123567789999998864 2456666655332 1123
Q ss_pred cEEEEEecCCc
Q 008607 101 DIYVVFELMES 111 (560)
Q Consensus 101 ~i~lV~E~~~g 111 (560)
.-+||||+++|
T Consensus 87 ~~~LVmE~i~G 97 (297)
T PRK10593 87 PDVLLLERLRG 97 (297)
T ss_pred CeEEEEeccCC
Confidence 47999999986
No 481
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.00 E-value=0.0033 Score=65.24 Aligned_cols=144 Identities=24% Similarity=0.283 Sum_probs=96.9
Q ss_pred CCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCc----------------c------cChhHHHH--HHHHHHHHH
Q 008607 22 GSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDI----------------F------EHVSDATR--ILREIKLLR 77 (560)
Q Consensus 22 ~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~----------------~------~~~~~~~~--i~rEi~iL~ 77 (560)
|---.|...|..|--+.||.|. ...|..+|||+++-. | .+....-. ...|+.-|.
T Consensus 143 G~i~~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLk 221 (520)
T KOG2270|consen 143 GVIVEINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLK 221 (520)
T ss_pred CeeeecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHH
Confidence 3334566678889999999986 456788999987421 1 11111222 235677777
Q ss_pred hcCCCCccccceeecCCCcCCCccEEEEEecCCccHH-HHHHhCCCCCHHHHHHHHHHHHHHHHHH-HhCCeeeccCCCC
Q 008607 78 LLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLH-QVIKANDDLTPEHYQFFLYQLLRGLKYI-HTANVFHRDLKPK 155 (560)
Q Consensus 78 ~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~gdL~-~~i~~~~~lse~~~~~i~~Qll~aL~yL-Hs~gIiHrDLKP~ 155 (560)
.|..-.|.-..-+.+- .-.|||++++.+-+ .=..++-.++...+..+-.|++.-+.-| |..+++|.||+-=
T Consensus 222 Rl~~aGIP~PePIlLk-------~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEf 294 (520)
T KOG2270|consen 222 RLNNAGIPCPEPILLK-------NHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEF 294 (520)
T ss_pred HHHhcCCCCCCceeee-------cceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhh
Confidence 7766555433333321 23799999985311 1111233588888888888888888877 6779999999999
Q ss_pred CeeeCCCCcEEEecccccc
Q 008607 156 NILANADCKLKICDFGLAR 174 (560)
Q Consensus 156 NILl~~~~~lKL~DFGla~ 174 (560)
|+|+- +|.|.|+|-+.+.
T Consensus 295 N~Lyh-dG~lyiIDVSQSV 312 (520)
T KOG2270|consen 295 NLLYH-DGKLYIIDVSQSV 312 (520)
T ss_pred hheEE-CCEEEEEEccccc
Confidence 99985 6789999998764
No 482
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.91 E-value=0.01 Score=61.25 Aligned_cols=29 Identities=17% Similarity=0.139 Sum_probs=27.1
Q ss_pred CeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 146 NVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 146 gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
+|+|+|+.+.|||++.++.+.|+||..+.
T Consensus 197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~ 225 (309)
T TIGR02904 197 VLVHGKLSLSHFLYDETRGGYFINFEKAS 225 (309)
T ss_pred eeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence 79999999999999999999999999774
No 483
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.83 E-value=0.0067 Score=61.70 Aligned_cols=30 Identities=33% Similarity=0.570 Sum_probs=25.2
Q ss_pred CeeeccCCCCCeeeCCCCc-EEEeccccccc
Q 008607 146 NVFHRDLKPKNILANADCK-LKICDFGLARV 175 (560)
Q Consensus 146 gIiHrDLKP~NILl~~~~~-lKL~DFGla~~ 175 (560)
.++|+|+.|.|||++.++. .-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 4899999999999997555 57999998743
No 484
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.79 E-value=0.012 Score=61.69 Aligned_cols=82 Identities=17% Similarity=0.148 Sum_probs=52.4
Q ss_pred EEeecCCeEEEEEEECCCCcEEEEEEec----Ccc-cChhHHHHHHHHHHHHHhcC--CCC-ccccceeecCCCcCCCcc
Q 008607 30 VIGKGSYGVVCSAYDTRTGEKVAIKKIN----DIF-EHVSDATRILREIKLLRLLR--HPD-IVEIKHILLPPSRREFKD 101 (560)
Q Consensus 30 ~IG~G~~G~Vy~a~d~~tg~~vAiK~i~----~~~-~~~~~~~~i~rEi~iL~~l~--Hpn-Iv~l~~i~~~~~~~~~~~ 101 (560)
.||.|.-..||++.+...++.|+||.-. ... .......+...|...|+... .|. +.+++. + ++ ..
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~-~-D~-----e~ 74 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH-F-DT-----EM 74 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE-E-cc-----cc
Confidence 4799999999999986544789999743 111 22445667778999998764 343 333433 2 11 23
Q ss_pred EEEEEecCCc--cHHHHHH
Q 008607 102 IYVVFELMES--DLHQVIK 118 (560)
Q Consensus 102 i~lV~E~~~g--dL~~~i~ 118 (560)
..+|||+++. .|...+.
T Consensus 75 ~~~vMEdL~~~~ilR~~Li 93 (370)
T TIGR01767 75 AVTVMEDLSHHKIARKGLI 93 (370)
T ss_pred ceehHhhCccchHHHHHHH
Confidence 4689999973 4544443
No 485
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.72 E-value=0.0019 Score=66.04 Aligned_cols=136 Identities=19% Similarity=0.214 Sum_probs=92.2
Q ss_pred CceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecC---cc---------------cChhHH--HHHHHHHHHHHhcCCC
Q 008607 23 SRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIND---IF---------------EHVSDA--TRILREIKLLRLLRHP 82 (560)
Q Consensus 23 ~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~---~~---------------~~~~~~--~~i~rEi~iL~~l~Hp 82 (560)
.-|.+.+.||=|--+.||.+-+ ..|+..++|.=+. .| ...-.. -...+|...|+.|...
T Consensus 92 ~v~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~ 170 (465)
T KOG2268|consen 92 SVESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYER 170 (465)
T ss_pred hhhhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHc
Confidence 4577888999999999999976 4588888885210 00 001111 2245788888888632
Q ss_pred C--ccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCCCCeee
Q 008607 83 D--IVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILA 159 (560)
Q Consensus 83 n--Iv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~gIiHrDLKP~NILl 159 (560)
. +...++ ...-++|||++.| .|.++-+-. ....+...|..-+.-|-.+|+||+|..-=||++
T Consensus 171 gfpVPkpiD---------~~RH~Vvmelv~g~Pl~~v~~v~------d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv 235 (465)
T KOG2268|consen 171 GFPVPKPID---------HNRHCVVMELVDGYPLRQVRHVE------DPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMV 235 (465)
T ss_pred CCCCCCccc---------ccceeeHHHhhcccceeeeeecC------ChHHHHHHHHHHHHHHHHcCceecccchheeEE
Confidence 2 222222 2235899999997 665543221 123345556666777889999999999999999
Q ss_pred CCCCcEEEecccccc
Q 008607 160 NADCKLKICDFGLAR 174 (560)
Q Consensus 160 ~~~~~lKL~DFGla~ 174 (560)
.+++.++++||-...
T Consensus 236 ~dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 236 KDDDKIVVIDFPQMV 250 (465)
T ss_pred ecCCCEEEeechHhh
Confidence 999999999997653
No 486
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.64 E-value=0.022 Score=58.49 Aligned_cols=28 Identities=25% Similarity=0.393 Sum_probs=25.0
Q ss_pred CCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 145 ANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 145 ~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
.+++|+|+.+.|||++. +.+.|+||+.+
T Consensus 187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~ 214 (313)
T TIGR02906 187 RGFCHQDYAYHNILLKD-NEVYVIDFDYC 214 (313)
T ss_pred CceEcCCCCcccEEEeC-CcEEEEECccc
Confidence 47999999999999987 67899999965
No 487
>PRK12396 5-methylribose kinase; Reviewed
Probab=96.44 E-value=0.024 Score=60.30 Aligned_cols=91 Identities=21% Similarity=0.257 Sum_probs=58.0
Q ss_pred CCCCceEEEEEEeecCCeEEEEEEECCCCcEEEEEEec---Ccc-cChhHHHHHHHHHHHHHhcC--CCCcc-ccceeec
Q 008607 20 GEGSRYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKIN---DIF-EHVSDATRILREIKLLRLLR--HPDIV-EIKHILL 92 (560)
Q Consensus 20 ~~~~~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~---~~~-~~~~~~~~i~rEi~iL~~l~--HpnIv-~l~~i~~ 92 (560)
...+.+. .+.||.|.-..||++.+...++.|+||.-. +.. +-.-...|...|.+.|+.+. .|..| +++. +
T Consensus 27 ~~~~~~~-~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~-~- 103 (409)
T PRK12396 27 EHAKGLQ-CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYL-F- 103 (409)
T ss_pred CCcccce-eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEE-E-
Confidence 4444455 567899999999999885446789999742 111 22445678888999998774 45443 3433 2
Q ss_pred CCCcCCCccEEEEEecCCc--cHHHHHH
Q 008607 93 PPSRREFKDIYVVFELMES--DLHQVIK 118 (560)
Q Consensus 93 ~~~~~~~~~i~lV~E~~~g--dL~~~i~ 118 (560)
++ ....+|||+++. .|.+.+.
T Consensus 104 D~-----e~~~~vMEdL~~~~ilR~~Li 126 (409)
T PRK12396 104 DS-----VMNCCVMEDLSDHTILRTALI 126 (409)
T ss_pred Cc-----HHhhHHHHhCcccHHHHHHHH
Confidence 11 235789999863 4555443
No 488
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.31 E-value=0.048 Score=56.96 Aligned_cols=146 Identities=14% Similarity=0.229 Sum_probs=79.3
Q ss_pred cccccC--CCCceEEEEEEeecCCeEEEEEEECCC---CcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc-ccc
Q 008607 15 FFTEYG--EGSRYKIEEVIGKGSYGVVCSAYDTRT---GEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIK 88 (560)
Q Consensus 15 ~~~~~~--~~~~Y~i~~~IG~G~~G~Vy~a~d~~t---g~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~ 88 (560)
+.++|. ..+..++..+.| |-...+|++..... +..|++|+...... ..-.-.+|..+++.+..-++. +++
T Consensus 5 ~~~~w~~~~~~~i~i~~l~g-GlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~---~~IdR~~E~~il~~l~~~gl~P~~l 80 (330)
T PLN02421 5 LFKGWSDLDDSDFSVERISG-GITNLLLKVSVKEENGNEVSVTVRLFGPNTD---YVIDRERELQAIKYLSAAGFGAKLL 80 (330)
T ss_pred hCCccccCCcCceEEEEeCC-cccceEEEEEecCCCCCCceEEEEEecCCcC---eEechHHHHHHHHHHHhcCCCCcee
Confidence 344454 234566655544 88888998864332 34899997753211 111224788999888755543 334
Q ss_pred eeecCCCcCCCccEEEEEecCCcc-H--------------HHHHHh-C-CC------C-CHHHHHHHHHHH---------
Q 008607 89 HILLPPSRREFKDIYVVFELMESD-L--------------HQVIKA-N-DD------L-TPEHYQFFLYQL--------- 135 (560)
Q Consensus 89 ~i~~~~~~~~~~~i~lV~E~~~gd-L--------------~~~i~~-~-~~------l-se~~~~~i~~Ql--------- 135 (560)
+.+ .. .+|.+|++|. | ...+++ + .. . -...+..++.++
T Consensus 81 ~~~--~~-------G~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~ 151 (330)
T PLN02421 81 GVF--GN-------GMIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPE 151 (330)
T ss_pred EEe--CC-------cEeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHH
Confidence 433 11 1477777652 1 111111 0 01 1 123333333322
Q ss_pred -------------HHHHHH---HH-hCC----eeeccCCCCCeeeCC-CCcEEEeccccc
Q 008607 136 -------------LRGLKY---IH-TAN----VFHRDLKPKNILANA-DCKLKICDFGLA 173 (560)
Q Consensus 136 -------------l~aL~y---LH-s~g----IiHrDLKP~NILl~~-~~~lKL~DFGla 173 (560)
..-+.. +. +.+ ++|.||.+.|||++. ++.++++||..|
T Consensus 152 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYa 211 (330)
T PLN02421 152 KQKKYETISFEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYG 211 (330)
T ss_pred HhhhhcccCHHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEccccc
Confidence 111222 21 112 799999999999975 578999999976
No 489
>PLN02236 choline kinase
Probab=96.11 E-value=0.05 Score=57.14 Aligned_cols=141 Identities=14% Similarity=0.131 Sum_probs=79.0
Q ss_pred CCCceEEEEEEeecCCeEEEEEEECC----CCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCcc-ccceeecCCC
Q 008607 21 EGSRYKIEEVIGKGSYGVVCSAYDTR----TGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIV-EIKHILLPPS 95 (560)
Q Consensus 21 ~~~~Y~i~~~IG~G~~G~Vy~a~d~~----tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv-~l~~i~~~~~ 95 (560)
..+...+.. |..|-...+|++.... +++.|++|...... ..... -.+|..+++.+..-++. ++++.+. .
T Consensus 35 ~~~~~~i~~-l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~--~ 108 (344)
T PLN02236 35 DDEALQVIP-LKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--ELFFD-RDDEIRTFECMSRHGQGPRLLGRFP--N 108 (344)
T ss_pred CcCcEEEEE-cCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--Ceeec-hHHHHHHHHHHHHcCCCCceEEEEC--C
Confidence 345566654 4448888999986322 34789999775421 11112 25689999888644443 3444431 1
Q ss_pred cCCCccEEEEEecCCc-cHH-----------HH---HH---hCC------CCCHHHHHHHHHHHH---------------
Q 008607 96 RREFKDIYVVFELMES-DLH-----------QV---IK---AND------DLTPEHYQFFLYQLL--------------- 136 (560)
Q Consensus 96 ~~~~~~i~lV~E~~~g-dL~-----------~~---i~---~~~------~lse~~~~~i~~Qll--------------- 136 (560)
..|.+|+++ +|. .+ +. ... ....+.+..|+.++.
T Consensus 109 -------g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 181 (344)
T PLN02236 109 -------GRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDS 181 (344)
T ss_pred -------ceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHH
Confidence 257788775 221 11 11 100 011233434432221
Q ss_pred --HHHHHH----H----hCCeeeccCCCCCeeeCC-CCcEEEecccccc
Q 008607 137 --RGLKYI----H----TANVFHRDLKPKNILANA-DCKLKICDFGLAR 174 (560)
Q Consensus 137 --~aL~yL----H----s~gIiHrDLKP~NILl~~-~~~lKL~DFGla~ 174 (560)
..+..| . ...++|+|+++.|||++. ++.+.|+||..|.
T Consensus 182 l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 182 LEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred HHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 111112 1 225899999999999986 4789999998764
No 490
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.01 E-value=0.09 Score=56.21 Aligned_cols=76 Identities=16% Similarity=0.134 Sum_probs=49.3
Q ss_pred EEEEEeecCCeEEEEEEECCCCcEEEEEEecCccc--C---hhHHHHHHHHHHHHHhcC---CCCccccceeecCCCcCC
Q 008607 27 IEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFE--H---VSDATRILREIKLLRLLR---HPDIVEIKHILLPPSRRE 98 (560)
Q Consensus 27 i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~--~---~~~~~~i~rEi~iL~~l~---HpnIv~l~~i~~~~~~~~ 98 (560)
..+.||.|....||++.+ .+..|+||.-..... . .-...+...|+..|+.+. ...+.+++.+..
T Consensus 36 ~~~eiggGn~N~VyrV~~--~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de------ 107 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVS--SSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR------ 107 (418)
T ss_pred eEEEcCCCceeeEEEEEc--CCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC------
Confidence 367789999999999976 345799997541100 1 124556667788887664 235666666542
Q ss_pred CccEEEEEecCCc
Q 008607 99 FKDIYVVFELMES 111 (560)
Q Consensus 99 ~~~i~lV~E~~~g 111 (560)
..-++|||++++
T Consensus 108 -d~~vlvME~L~~ 119 (418)
T PLN02756 108 -TMALIGMRYLEP 119 (418)
T ss_pred -CCCEEEEeecCC
Confidence 124789999976
No 491
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.33 E-value=0.036 Score=57.75 Aligned_cols=74 Identities=23% Similarity=0.354 Sum_probs=58.9
Q ss_pred CCccEEEEEecCCccHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-CeeeccCCCCCeeeCCCCcEEEecccccccc
Q 008607 98 EFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTA-NVFHRDLKPKNILANADCKLKICDFGLARVA 176 (560)
Q Consensus 98 ~~~~i~lV~E~~~gdL~~~i~~~~~lse~~~~~i~~Qll~aL~yLHs~-gIiHrDLKP~NILl~~~~~lKL~DFGla~~~ 176 (560)
+..+.|++|++-++.|.-. + .-..+++..|+++.+..+.-+... ..-|||+.-.||||+ +|.|-|+||-++|..
T Consensus 297 e~~y~yl~~kdhgt~is~i-k---~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 297 ETLYLYLHFKDHGTPISII-K---ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred CceEEEEEEecCCceeeee-e---cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence 4457889999888765422 1 234677888999988888877755 688999999999999 999999999999853
No 492
>PTZ00384 choline kinase; Provisional
Probab=94.63 E-value=0.21 Score=53.22 Aligned_cols=28 Identities=32% Similarity=0.309 Sum_probs=23.4
Q ss_pred CCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 145 ANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 145 ~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
...+|.||-+.|||.++ ..++++||..|
T Consensus 227 ~VfCHNDL~~gNIL~~~-~~l~lID~EYA 254 (383)
T PTZ00384 227 VLFCHNDLFFTNILDFN-QGIYFIDFDFA 254 (383)
T ss_pred eeeeeccCCcccEEecC-CCEEEEEeccc
Confidence 35799999999999765 46999999866
No 493
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.56 E-value=0.57 Score=48.74 Aligned_cols=72 Identities=15% Similarity=0.083 Sum_probs=40.6
Q ss_pred cCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCC--ccccceeecCCC--cCCCccEEEEEecC
Q 008607 34 GSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPD--IVEIKHILLPPS--RREFKDIYVVFELM 109 (560)
Q Consensus 34 G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~Hpn--Iv~l~~i~~~~~--~~~~~~i~lV~E~~ 109 (560)
+.-..||.+.. ..|..+++|+.+. .......+..|+.++..|.... ++.... .... ....+..+.|++++
T Consensus 36 s~eN~vy~v~~-~~~~~~vlKv~r~---~~~~~~~i~~E~~~l~~L~~~gipv~~p~~--~~G~~~~~~~g~~~~l~~~~ 109 (325)
T PRK11768 36 SYENRVYQFGD-EDGRRVVAKFYRP---ERWSDAQILEEHAFALELAEAEIPVVAPLA--FNGQTLHEHQGFRFALFPRR 109 (325)
T ss_pred cccceEEEEec-CCCCEEEEEEcCc---ccCCHHHHHHHHHHHHHHHHCCCCCCCCcc--CCCCEEEEECCEEEEEEeee
Confidence 44556888853 4566789987642 1124566778999988885322 222111 1110 01123467899998
Q ss_pred Cc
Q 008607 110 ES 111 (560)
Q Consensus 110 ~g 111 (560)
+|
T Consensus 110 ~G 111 (325)
T PRK11768 110 GG 111 (325)
T ss_pred CC
Confidence 86
No 494
>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=94.36 E-value=0.16 Score=49.56 Aligned_cols=101 Identities=18% Similarity=0.223 Sum_probs=64.0
Q ss_pred cEEEEEEecCcccChhHHHHHHHHHHHHHhcCCCCccccceeecCCCcCCCccEEEEEecCCc--cHHHHHHhCCCCCHH
Q 008607 49 EKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMES--DLHQVIKANDDLTPE 126 (560)
Q Consensus 49 ~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g--dL~~~i~~~~~lse~ 126 (560)
-...+|++....-.. ...-+..+..++.++. .|+++.. .+.-.+-++.|.|-. .+.
T Consensus 86 G~L~lKKi~slp~~~-~~~~y~nky~v~Armh--GilrL~N-------Dn~~~yGvIlE~Cy~~~i~~------------ 143 (308)
T PF07387_consen 86 GPLFLKKIRSLPCCI-NDALYFNKYRVFARMH--GILRLKN-------DNNYKYGVILERCYKIKINF------------ 143 (308)
T ss_pred chhhhhhccCCCccc-chhhhhhhhhHHHHhh--heeEeec-------CCCceeEEEEeeccCcccch------------
Confidence 345666665321111 2233467888887664 4555542 122357789999863 111
Q ss_pred HHHHHHHHHHHHHHHHHh--CCeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 127 HYQFFLYQLLRGLKYIHT--ANVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 127 ~~~~i~~Qll~aL~yLHs--~gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
..++..=+.+|.-.|+ .+.+|+|-.|+||+.|..|-+||.|-+.-
T Consensus 144 --~N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~L 190 (308)
T PF07387_consen 144 --SNFITAGIKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVCL 190 (308)
T ss_pred --hHHHHHhHHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhhh
Confidence 1112222566777884 37999999999999999999999998753
No 495
>PRK06148 hypothetical protein; Provisional
Probab=94.01 E-value=0.42 Score=57.39 Aligned_cols=31 Identities=42% Similarity=0.574 Sum_probs=26.3
Q ss_pred CCeeeccCCCCCeeeCCCC--cEE-Eeccccccc
Q 008607 145 ANVFHRDLKPKNILANADC--KLK-ICDFGLARV 175 (560)
Q Consensus 145 ~gIiHrDLKP~NILl~~~~--~lK-L~DFGla~~ 175 (560)
.+|||+|+.+.|||++.++ .+. |+|||.+..
T Consensus 203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~ 236 (1013)
T PRK06148 203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH 236 (1013)
T ss_pred cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence 4799999999999999875 554 999998754
No 496
>PHA03111 Ser/Thr kinase; Provisional
Probab=93.90 E-value=0.15 Score=52.63 Aligned_cols=76 Identities=26% Similarity=0.287 Sum_probs=47.3
Q ss_pred cEEEEEecCCcc---HHH-HHHhCCCC-CHHHHHHHHHHHHHHHHHHHh----CCeeeccCCCCCeeeCCCC--------
Q 008607 101 DIYVVFELMESD---LHQ-VIKANDDL-TPEHYQFFLYQLLRGLKYIHT----ANVFHRDLKPKNILANADC-------- 163 (560)
Q Consensus 101 ~i~lV~E~~~gd---L~~-~i~~~~~l-se~~~~~i~~Qll~aL~yLHs----~gIiHrDLKP~NILl~~~~-------- 163 (560)
.-.|||++..++ +.. .+.+.|-. -.+-+++++.||+.-.-.+-. .+.+|-||||+||||-+..
T Consensus 249 GnIIIfPLArcSadkv~~~~~~e~GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~ 328 (444)
T PHA03111 249 GNIIIFPLARCSADKVTEENAAELGFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLK 328 (444)
T ss_pred CcEEEEehhhcccccCCHHHHHHcCCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEEC
Confidence 346788876542 211 22223322 346788899999876644432 3689999999999975443
Q ss_pred ----------cEEEecccccccc
Q 008607 164 ----------KLKICDFGLARVA 176 (560)
Q Consensus 164 ----------~lKL~DFGla~~~ 176 (560)
+.+|.||.++++.
T Consensus 329 ~~~~vF~Epi~~~LnDFDfSqv~ 351 (444)
T PHA03111 329 DATYVFNEPIKACLNDFDFSQVA 351 (444)
T ss_pred CeEEEeccchhhhhcccCHHHHc
Confidence 2466677776653
No 497
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=93.35 E-value=0.14 Score=52.99 Aligned_cols=75 Identities=25% Similarity=0.301 Sum_probs=46.9
Q ss_pred EEEEEecCCcc-----HHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCCCCeeeCCCC---------
Q 008607 102 IYVVFELMESD-----LHQVIKANDDLTPEHYQFFLYQLLRGLKYIH----TANVFHRDLKPKNILANADC--------- 163 (560)
Q Consensus 102 i~lV~E~~~gd-----L~~~i~~~~~lse~~~~~i~~Qll~aL~yLH----s~gIiHrDLKP~NILl~~~~--------- 163 (560)
-.|||++..++ +....+-+-.--.+-+++++.||+.-.-.+- -.+.+|-||||+||||-+..
T Consensus 246 nIIIfPLA~~Sadkv~~~~~~e~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~ 325 (434)
T PF05445_consen 246 NIIIFPLARCSADKVTESNAAELGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFGN 325 (434)
T ss_pred cEEEEehhhcchhhcCHHHHHhcCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEECC
Confidence 35888887642 2222221112234667888899876442232 34689999999999975432
Q ss_pred ---------cEEEecccccccc
Q 008607 164 ---------KLKICDFGLARVA 176 (560)
Q Consensus 164 ---------~lKL~DFGla~~~ 176 (560)
..+|.||.++++.
T Consensus 326 ~~~vF~Epi~~~LnDFDfSqv~ 347 (434)
T PF05445_consen 326 RNYVFKEPIRCCLNDFDFSQVA 347 (434)
T ss_pred eEEEecccceeeecccCHHHhc
Confidence 2677888888764
No 498
>PTZ00296 choline kinase; Provisional
Probab=92.71 E-value=0.95 Score=49.22 Aligned_cols=27 Identities=33% Similarity=0.701 Sum_probs=23.2
Q ss_pred CeeeccCCCCCeeeCCCCcEEEeccccc
Q 008607 146 NVFHRDLKPKNILANADCKLKICDFGLA 173 (560)
Q Consensus 146 gIiHrDLKP~NILl~~~~~lKL~DFGla 173 (560)
.++|.|+-+.|||.+.++ ++|+||..|
T Consensus 285 VfCHNDl~~~NiL~~~~~-l~LIDfEYA 311 (442)
T PTZ00296 285 VFCHNDLQENNIINTNKC-LRLIDFEYS 311 (442)
T ss_pred eEEeCCCCccceeecCCC-EEEEeeccc
Confidence 479999999999987554 999999866
No 499
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=92.68 E-value=0.97 Score=46.25 Aligned_cols=75 Identities=15% Similarity=0.135 Sum_probs=43.0
Q ss_pred ceEEEEEEeecCCeEEEEEEECCCCcEEEEEEecCcccChhHHHHHHHHHHHHHhcCC---CCccccceeecCCCcCCCc
Q 008607 24 RYKIEEVIGKGSYGVVCSAYDTRTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRH---PDIVEIKHILLPPSRREFK 100 (560)
Q Consensus 24 ~Y~i~~~IG~G~~G~Vy~a~d~~tg~~vAiK~i~~~~~~~~~~~~i~rEi~iL~~l~H---pnIv~l~~i~~~~~~~~~~ 100 (560)
.-+-.+.|+-|....+|... .+++.+.||+-.. .....+..|..-|+.|.. -.+.+++.+....+
T Consensus 18 ~i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~-----~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~----- 85 (288)
T PF03881_consen 18 KITSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE-----SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDD----- 85 (288)
T ss_dssp ---EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG-----GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SS-----
T ss_pred ceeeeEecCCCChhheEEEE--CCCccEEEEecCh-----hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecC-----
Confidence 34556778889999999885 7888999997642 223446678888888842 23445555442221
Q ss_pred cEEEEEecCC
Q 008607 101 DIYVVFELME 110 (560)
Q Consensus 101 ~i~lV~E~~~ 110 (560)
.-||||||++
T Consensus 86 ~~fLlle~l~ 95 (288)
T PF03881_consen 86 DAFLLLEFLE 95 (288)
T ss_dssp CCEEEEE---
T ss_pred CceEEEEeec
Confidence 2389999987
No 500
>KOG2269 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=91.80 E-value=0.19 Score=51.69 Aligned_cols=136 Identities=21% Similarity=0.293 Sum_probs=89.0
Q ss_pred EEEEEEeecCCeEEEEEEE-------CC---CCcEEEEEEecCc--------------------cc--ChhHHHHHH--H
Q 008607 26 KIEEVIGKGSYGVVCSAYD-------TR---TGEKVAIKKINDI--------------------FE--HVSDATRIL--R 71 (560)
Q Consensus 26 ~i~~~IG~G~~G~Vy~a~d-------~~---tg~~vAiK~i~~~--------------------~~--~~~~~~~i~--r 71 (560)
.|..+|..|.-++|+-|+- .. ....+|||+++-. |. +......+. +
T Consensus 255 ~i~GiIsTGKEsvvlHAY~GS~E~~~qd~ql~ptecAIKvfKTTLnEFKnRd~YiKDDfRFKDRFSK~NpR~i~~mWAEk 334 (531)
T KOG2269|consen 255 SIDGIISTGKESVVLHAYAGSNEHGHQDPQLSPTECAIKVFKTTLNEFKNRDEYIKDDFRFKDRFSKQNPRGILKMWAEK 334 (531)
T ss_pred hhhhhhhcCcceEEEEeccCcccccccCcccCchHHHHHHHHHHHHHHhhhhhhhccchhhhhhhcccCcHHHHHHHHHH
Confidence 3456788899999987742 11 3346899876411 11 111112222 3
Q ss_pred HHHHHHhcC-----CCCccccceeecCCCcCCCccEEEEEecCCc-cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH-Hh
Q 008607 72 EIKLLRLLR-----HPDIVEIKHILLPPSRREFKDIYVVFELMES-DLHQVIKANDDLTPEHYQFFLYQLLRGLKYI-HT 144 (560)
Q Consensus 72 Ei~iL~~l~-----HpnIv~l~~i~~~~~~~~~~~i~lV~E~~~g-dL~~~i~~~~~lse~~~~~i~~Qll~aL~yL-Hs 144 (560)
|+.-|.+++ +|.+|.+.. -.|||-+++. .+..=-.++-.|+.++.+..-.|++.++.-| |.
T Consensus 335 EmhNL~RMq~~GlpcP~vV~lkk------------hvLVMsFiGd~~~aAPkLK~v~l~d~E~~~aY~q~~~~M~~lY~E 402 (531)
T KOG2269|consen 335 EMHNLSRMQKHGLPCPQVVKLKK------------HVLVMSFIGDQGLAAPKLKNVELTDDERRNAYDQVQSIMCRLYKE 402 (531)
T ss_pred HHHHHHHHHhcCCCCCceeeeec------------ceEEEEeecCCCCCCccccccccChHHHHHHHHHHHHHHHHHHHh
Confidence 444444443 566665543 2689999884 2221111233589999999999999998887 67
Q ss_pred CCeeeccCCCCCeeeCCCCcEEEecccccc
Q 008607 145 ANVFHRDLKPKNILANADCKLKICDFGLAR 174 (560)
Q Consensus 145 ~gIiHrDLKP~NILl~~~~~lKL~DFGla~ 174 (560)
.-++|-||+--|||.... .+.++|-..+.
T Consensus 403 c~LVHADlSEyN~Lw~~g-Kvw~IDVsQsv 431 (531)
T KOG2269|consen 403 CLLVHADLSEYNLLWTPG-KVWVIDVSQSV 431 (531)
T ss_pred hheeecchhhhhheecCC-ceEEEechhcc
Confidence 789999999999999876 89999987653
Done!