Your job contains 1 sequence.
>008612
MEMPQYDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRD
FMINKYREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINFGAVSRGDDSDNRDSS
LGDTELKNQVKIEEGAPNGVRVVALPNSLKPISVPNSGADGSGNGKVAVAGETGVKLPPL
ASYLDVFGDLVKLKGFKCGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDFR
FSDLGGNSLTHGATWTEAETLLLLESVMRHGDNWELVAQNVPTKSKLDCISKLIELPFGE
FMMGSAHEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEP
PAKRKRIAPLSDGGSTLIKQVAHISTMVGPHVTAAAAEAAVAALCNESSCPREIFDGDED
YLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNLRIRTATATALGAA
AANAKLLADQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVE
ERIDVLERALKTGVSKWRS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 008612
(559 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043263 - symbol:SWI3A "SWITCH/sucrose nonferm... 609 5.2e-102 2
TAIR|locus:2051028 - symbol:SWI3B "switch subunit 3" spec... 244 1.6e-34 3
DICTYBASE|DDB_G0277033 - symbol:swi3 "SWIRM domain-contai... 258 2.9e-33 3
MGI|MGI:1203524 - symbol:Smarcc1 "SWI/SNF related, matrix... 233 2.9e-27 5
UNIPROTKB|Q92922 - symbol:SMARCC1 "SWI/SNF complex subuni... 233 2.9e-27 5
ZFIN|ZDB-GENE-080514-3 - symbol:smarcc1a "SWI/SNF related... 241 9.9e-27 3
ZFIN|ZDB-GENE-060503-273 - symbol:smarcc1b "SWI/SNF relat... 236 1.0e-26 4
POMBASE|SPAC23H3.10 - symbol:ssr2 "SWI/SNF and RSC comple... 249 1.9e-26 2
UNIPROTKB|G5EF87 - symbol:swsn-1 "SWI3-like protein" spec... 216 2.5e-26 3
WB|WBGene00004203 - symbol:swsn-1 species:6239 "Caenorhab... 216 2.5e-26 3
RGD|1304850 - symbol:Smarcc1 "SWI/SNF related, matrix ass... 233 2.9e-26 4
UNIPROTKB|G3N0H4 - symbol:SMARCC1 "Uncharacterized protei... 233 3.0e-26 4
ASPGD|ASPL0000005061 - symbol:AN6705 species:162425 "Emer... 243 4.4e-26 3
UNIPROTKB|F1MYU1 - symbol:SMARCC1 "Uncharacterized protei... 233 4.7e-26 3
UNIPROTKB|F1N4N6 - symbol:SMARCC2 "Uncharacterized protei... 237 8.4e-26 4
UNIPROTKB|F1SM00 - symbol:LOC100621845 "Uncharacterized p... 237 1.9e-25 4
UNIPROTKB|E2REF0 - symbol:SMARCC1 "Uncharacterized protei... 233 2.3e-25 3
UNIPROTKB|I3LRY4 - symbol:I3LRY4 "Uncharacterized protein... 237 2.3e-25 4
RGD|1597704 - symbol:Smarcc2 "SWI/SNF related, matrix ass... 236 2.8e-25 4
UNIPROTKB|F1PVA9 - symbol:SMARCC2 "Uncharacterized protei... 237 3.4e-25 4
UNIPROTKB|F1P1A8 - symbol:F1P1A8 "Uncharacterized protein... 234 3.4e-25 3
UNIPROTKB|Q8TAQ2 - symbol:SMARCC2 "SWI/SNF complex subuni... 237 3.7e-25 4
UNIPROTKB|F8VXC8 - symbol:SMARCC2 "SWI/SNF complex subuni... 237 4.3e-25 4
POMBASE|SPAC17G6.10 - symbol:ssr1 "SWI/SNF and RSC comple... 234 5.3e-25 3
MGI|MGI:1915344 - symbol:Smarcc2 "SWI/SNF related, matrix... 237 6.0e-25 4
FB|FBgn0002783 - symbol:mor "moira" species:7227 "Drosoph... 228 1.3e-24 4
TAIR|locus:2036942 - symbol:SWI3C "SWITCH/sucrose nonferm... 251 3.3e-24 2
SGD|S000001933 - symbol:RSC8 "Component of the RSC chroma... 283 3.6e-24 2
CGD|CAL0002007 - symbol:orf19.4488 species:5476 "Candida ... 265 2.4e-23 2
SGD|S000003712 - symbol:SWI3 "Subunit of the SWI/SNF chro... 210 1.8e-22 3
UNIPROTKB|G4MV88 - symbol:MGG_01720 "Transcription regula... 229 2.7e-22 3
UNIPROTKB|F1SLI6 - symbol:LOC100626030 "Uncharacterized p... 233 3.7e-17 2
UNIPROTKB|I3LJ29 - symbol:SMARCC1 "Uncharacterized protei... 233 1.8e-16 1
CGD|CAL0003837 - symbol:orf19.7234 species:5476 "Candida ... 190 1.2e-15 3
DICTYBASE|DDB_G0288285 - symbol:mybX "myb domain-containi... 89 1.5e-06 6
UNIPROTKB|I3LNI6 - symbol:LOC100737447 "Uncharacterized p... 113 3.7e-05 2
>TAIR|locus:2043263 [details] [associations]
symbol:SWI3A "SWITCH/sucrose nonfermenting 3A"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0016514 "SWI/SNF complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
EMBL:AC002535 HSSP:P32591 eggNOG:COG5259 KO:K11649 EMBL:AY062794
EMBL:AY081570 IPI:IPI00529579 PIR:T00422 RefSeq:NP_850476.1
UniGene:At.27229 ProteinModelPortal:Q8W475 SMR:Q8W475 IntAct:Q8W475
STRING:Q8W475 PaxDb:Q8W475 PRIDE:Q8W475 EnsemblPlants:AT2G47620.1
GeneID:819375 KEGG:ath:AT2G47620 TAIR:At2g47620
HOGENOM:HOG000083881 InParanoid:Q8W475 OMA:SCPKEIF PhylomeDB:Q8W475
ProtClustDB:CLSN2680302 Genevestigator:Q8W475 Uniprot:Q8W475
Length = 512
Score = 609 (219.4 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 137/296 (46%), Positives = 180/296 (60%)
Query: 128 NQVKIEEGAPNGVRVVALPNSLKPISVPNSGADGSGNGKVAVAGETGVKLPPLASYLDVF 187
+ KIE+G P G+RV A PNSL+PI+ P + +V ETG+K+PPL SY DVF
Sbjct: 115 DNAKIEQGTPAGIRVTATPNSLRPITAPPLVEE-----RV----ETGIKVPPLTSYSDVF 165
Query: 188 GDLVKLKG-FKCGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDFRFSDLGG 246
DL K C CGE+C+S Y+++K G ICEKCFKNGNYGE+ + DDF+ L G
Sbjct: 166 SDLKKPDHVLVCAHCGERCDSPFYQHNK-GIVNICEKCFKNGNYGENNTADDFK---LIG 221
Query: 247 NSLTHGXXXXXXXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSA 306
NS SV++HGD+WEL++Q+V TKS+LDCISKLIELPFGEF+MGSA
Sbjct: 222 NSAA--AVWTEEEILLLLESVLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMGSA 279
Query: 307 HEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATE-EPPAKRK 365
+G LN EN V+ + Q H++ ++ D E EPPAKRK
Sbjct: 280 ---------SGRLNP---SILTEDENTEQVQTDGQEHEETETREEKEDRVNEDEPPAKRK 327
Query: 366 RIAPLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCNESSCPREIFDGDEDY 421
R+A +S+G S+L+KQVA +++ VGP V LC+E+SCP+EIFD D DY
Sbjct: 328 RVALISEGDSSLMKQVAAMASKVGPSVATAAAKAALAALCDEASCPKEIFDTD-DY 382
Score = 422 (153.6 bits), Expect = 5.2e-102, Sum P(2) = 5.2e-102
Identities = 87/153 (56%), Positives = 103/153 (67%)
Query: 3 MPQYDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFM 62
M DP+ E ELYTIP+ SSWF WDDIHE ER EFF SSI+RTPK+YKEYRDF+
Sbjct: 1 MEATDPSA--EIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFI 58
Query: 63 INKYREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINFGAVXXXXXXXXXXXXXX 122
INK+RE+ RRLTFT VRK LVGDV+LL KVF L++WGLINF +
Sbjct: 59 INKFREDTCRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSS--------SLKKNDH 110
Query: 123 XTELKNQVKIEEGAPNGVRVVALPNSLKPISVP 155
+ N KIE+G P G+RV A PNSL+PI+ P
Sbjct: 111 LLSVDN-AKIEQGTPAGIRVTATPNSLRPITAP 142
Score = 385 (140.6 bits), Expect = 2.2e-78, Sum P(2) = 2.2e-78
Identities = 89/229 (38%), Positives = 132/229 (57%)
Query: 331 ENQNDVKMEDQVHDQMNESKQNGDAATE-EPPAKRKRIAPLSDGGSTLIKQVAHISTMVG 389
EN V+ + Q H++ ++ D E EPPAKRKR+A +S+G S+L+KQVA +++ VG
Sbjct: 292 ENTEQVQTDGQEHEETETREEKEDRVNEDEPPAKRKRVALISEGDSSLMKQVAAMASKVG 351
Query: 390 PHVTXXXXXXXXXXLCNESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEEN 449
P V LC+E+SCP+EIFD D DY S+ T+ +RA + MEE
Sbjct: 352 PSVATAAAKAALAALCDEASCPKEIFDTD-DY-----SNFTV----DRANGEKDTDMEEQ 401
Query: 450 QSETQDASSEKNDVPLNLRIRXXXXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKK 509
Q E +D +P+ LRIR DQE+RE+E L A +IE Q+KK
Sbjct: 402 QEE-KDGPQ---GLPVALRIRASVATALGAAAAQAKILADQEEREMEQLAATVIEQQLKK 457
Query: 510 LHSKINYFDDLELIMEKEYNEMMQLKECLVEERIDVLERALKTGVSK-W 557
L SK+ + DDLE IM++E + +KE +++ER+ VL+ A ++G++K W
Sbjct: 458 LQSKLKFLDDLESIMDEEEKVIEGVKETIIQERVSVLQCAFRSGITKRW 506
Score = 53 (23.7 bits), Expect = 2.0e-43, Sum P(2) = 2.0e-43
Identities = 9/38 (23%), Positives = 22/38 (57%)
Query: 423 ANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEK 460
A+G +P+++++ E QV E ++ET++ ++
Sbjct: 279 ASGRLNPSILTEDENTEQVQTDGQEHEETETREEKEDR 316
>TAIR|locus:2051028 [details] [associations]
symbol:SWI3B "switch subunit 3" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0040029 "regulation
of gene expression, epigenetic" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0007275 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 EMBL:AC002332 HSSP:P32591
eggNOG:COG5259 KO:K11649 OMA:LCARCYV EMBL:BT004085 EMBL:BT005094
IPI:IPI00525437 PIR:F84747 RefSeq:NP_180919.2 UniGene:At.43725
ProteinModelPortal:Q84JG2 SMR:Q84JG2 IntAct:Q84JG2 STRING:Q84JG2
PaxDb:Q84JG2 PRIDE:Q84JG2 EnsemblPlants:AT2G33610.1 GeneID:817927
KEGG:ath:AT2G33610 TAIR:At2g33610 HOGENOM:HOG000238867
InParanoid:Q84JG2 PhylomeDB:Q84JG2 ProtClustDB:CLSN2680010
Genevestigator:Q84JG2 Uniprot:Q84JG2
Length = 469
Score = 244 (91.0 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 43/100 (43%), Positives = 67/100 (67%)
Query: 8 PNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYR 67
P++ + + +PS+SSWF W DI++ E +L EFFD S S+ PK Y R+ +I +YR
Sbjct: 39 PSSSSDIDNIHVPSYSSWFSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYR 98
Query: 68 EEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINFGA 107
++ R+++FT VR++LV DV + +VF LD WGLIN+ +
Sbjct: 99 DDHPRKISFTDVRRTLVSDVVSIRRVFDFLDSWGLINYNS 138
Score = 137 (53.3 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 30/112 (26%), Positives = 53/112 (47%)
Query: 198 CGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDFRFSDLGGNSLTHGXXXXX 257
C C C+ C+ K +C +C+ NY + +F+ ++ S
Sbjct: 175 CNGCKAICSIACFACDKY-DLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWSDKEI 233
Query: 258 XXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIELPFGE-FMMGSAHE 308
+VM +GD+W+ VA +V +++ DC+S+ ++LPFGE F+ S E
Sbjct: 234 LLLLE---AVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSE 282
Score = 100 (40.3 bits), Expect = 1.6e-34, Sum P(3) = 1.6e-34
Identities = 34/143 (23%), Positives = 64/143 (44%)
Query: 330 SENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVG 389
S++++ ++M DQ+ D + + G P KR ++ PL+D + ++ Q A +S + G
Sbjct: 279 SDSEDGLEMFDQIKDS-DIPESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAG 337
Query: 390 PHVTXXXXXXXXXXLCN-ESSCPREIFDGDEDYLANGLSS-PTMVSDPERALQVDASKME 447
+V L + + + AN SS T ++ ERA S +E
Sbjct: 338 TNVAEAAARAAVRALSDVDYEADKNASRDPNRQDANAASSGETTRNESERAWADAKSLIE 397
Query: 448 ENQSETQDASSEKNDVPLNLRIR 470
+ + E + A E +V + +IR
Sbjct: 398 KEEHEVEGAIKETVEVEMK-KIR 419
Score = 91 (37.1 bits), Expect = 1.3e-33, Sum P(3) = 1.3e-33
Identities = 17/67 (25%), Positives = 41/67 (61%)
Query: 489 DQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEERIDVL-- 546
++E+ E+E + +E +MKK+ +I +F+ L+L ME+ ++ +++ L +++++
Sbjct: 397 EKEEHEVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFH 456
Query: 547 -ERALKT 552
+A KT
Sbjct: 457 TRKARKT 463
>DICTYBASE|DDB_G0277033 [details] [associations]
symbol:swi3 "SWIRM domain-containing protein Swi3"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 InterPro:IPR001357 dictyBase:DDB_G0277033
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000019 SUPFAM:SSF52113 eggNOG:COG5259
KO:K11649 RefSeq:XP_642866.1 ProteinModelPortal:Q550R6 SMR:Q550R6
PRIDE:Q550R6 EnsemblProtists:DDB0219999 GeneID:8620732
KEGG:ddi:DDB_G0277033 InParanoid:Q550R6 OMA:QTTIDMP
ProtClustDB:CLSZ2430855 Uniprot:Q550R6
Length = 1223
Score = 258 (95.9 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 50/104 (48%), Positives = 68/104 (65%)
Query: 4 PQYDPNTKPEFEL-YTIP-SHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDF 61
PQ P + +TIP S +WF+ + IHE E+ L EFF G S S+TP++YKEYRDF
Sbjct: 626 PQPQPPKNVTLQSSFTIPPSQCTWFKMERIHEVEKNQLPEFFTGKSPSKTPEVYKEYRDF 685
Query: 62 MINKYREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
MIN Y + P + LT T +R++LVGDV + +V L+ WGLIN+
Sbjct: 686 MINTYLQNPYQYLTLTAIRRNLVGDVCSILRVHSFLEHWGLINY 729
Score = 128 (50.1 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 32/127 (25%), Positives = 56/127 (44%)
Query: 421 YLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNLRIRXXXXXXXXXX 480
+L+ +SS + + A D E S D ++ ND + I+
Sbjct: 1015 FLSTSVSSEVASAAAKAA--TDVLNKENGDSMITDNDNDDNDHLSKVNIQAAASATLAAT 1072
Query: 481 XXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVE 540
E+REI+ L+ II Q KKL K+ + ++E +EKE N++ + ++ L
Sbjct: 1073 SIKAKALSKSEEREIQSLILKIINVQTKKLELKLKCYSEMENALEKEKNQLEKERQALFS 1132
Query: 541 ERIDVLE 547
ER +L+
Sbjct: 1133 ERFSLLK 1139
Score = 104 (41.7 bits), Expect = 2.9e-33, Sum P(3) = 2.9e-33
Identities = 34/123 (27%), Positives = 54/123 (43%)
Query: 217 SFVICEKCFKNGNYGEDKS---KDDFRFSDLGGNS-LTHGXXXXXXXXXXXXXSVMRHGD 272
+ ++C CF N D S KD F+ +L S L + + D
Sbjct: 880 TILLCNNCFTNDQTFIDHSHLIKDQFKKIELPEPSPLEDQWTDQETLLLLEALDI--YSD 937
Query: 273 NWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSEN 332
+W VA +V TKSK C+ + ++LP E + + S P S NS+ G S+++ N
Sbjct: 938 SWNDVADHVKTKSKEQCLLQFLKLPIEEPYLEDNITKSISLQPPSS-NSILNGSSSNNNN 996
Query: 333 QND 335
N+
Sbjct: 997 NNN 999
Score = 51 (23.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/69 (24%), Positives = 29/69 (42%)
Query: 318 SLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTL 377
+LNS +++SEN + N D+ +E + ++ PL+D ST
Sbjct: 351 TLNSNNSNSNSNSENTTAQDSNGGTEQSNGGDQMNVDSGSEVNDSNKR---PLADPTSTP 407
Query: 378 IKQVAHIST 386
K+ H T
Sbjct: 408 SKKQKHDDT 416
Score = 43 (20.2 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 20/83 (24%), Positives = 36/83 (43%)
Query: 279 QNVPTKSKLDCISKLIELPFGE-FMMGSAHEMNS--SSCPTGSLN-SLKEGQSASSENQN 334
+N K K + + K + F E F + A + N P+ +N + K+ Q S+ Q+
Sbjct: 1113 ENALEKEK-NQLEKERQALFSERFSLLKASQNNQLQQQIPSYLVNQNKKDHQQQQSQLQS 1171
Query: 335 DVKMEDQVHDQMNESKQNGDAAT 357
++ + Q Q N + Q T
Sbjct: 1172 QLQQQPQQQQQQNYNDQPSATTT 1194
Score = 43 (20.2 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 12/58 (20%), Positives = 28/58 (48%)
Query: 310 NSSSCPTGSLNSLKEGQSASSENQNDV-KMEDQVHDQMNESKQNGDAATEEPPAKRKR 366
N+S+ + S N+ + + +E N +M ++N+S + A P+K+++
Sbjct: 355 NNSNSNSNSENTTAQDSNGGTEQSNGGDQMNVDSGSEVNDSNKRPLADPTSTPSKKQK 412
>MGI|MGI:1203524 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10090 "Mus musculus" [GO:0001741 "XY body" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006323 "DNA packaging" evidence=TAS] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IDA] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1203524 GO:GO:0008286 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0006323 GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 CTD:6599
HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649 OMA:YKKYVHA
EMBL:U85614 EMBL:BC052423 EMBL:BC053064 IPI:IPI00125662
IPI:IPI00515361 PIR:T30967 RefSeq:NP_033237.2 UniGene:Mm.85410
ProteinModelPortal:P97496 SMR:P97496 DIP:DIP-39986N IntAct:P97496
MINT:MINT-4084777 STRING:P97496 PhosphoSite:P97496 PaxDb:P97496
PRIDE:P97496 Ensembl:ENSMUST00000088716 Ensembl:ENSMUST00000111969
GeneID:20588 KEGG:mmu:20588 UCSC:uc009rto.1 UCSC:uc009rtp.1
GeneTree:ENSGT00390000018166 InParanoid:P97496 OrthoDB:EOG4JHCF5
NextBio:298891 Bgee:P97496 Genevestigator:P97496
GermOnline:ENSMUSG00000032481 Uniprot:P97496
Length = 1104
Score = 233 (87.1 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 450 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 509
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 510 CRRNLTGDVCAVMRVHAFLEQWGLVNY 536
Score = 128 (50.1 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q ++ L+ ER
Sbjct: 887 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 938
Score = 56 (24.8 bits), Expect = 7.7e-27, Sum P(4) = 7.7e-27
Identities = 14/66 (21%), Positives = 33/66 (50%)
Query: 300 EFMMGSAHEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEE 359
E + GS E + P G E + + ++ D K++D+ +++ E +Q+ D + +
Sbjct: 770 EKLEGSEEEKMETD-PDGQQPEKAENKVENESDEGD-KIQDRENEKNTEKEQDSDVSEDV 827
Query: 360 PPAKRK 365
P +++
Sbjct: 828 KPEEKE 833
Score = 52 (23.4 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 639 DDWNKVSEHVGSRTQDECILHFLRLP 664
Score = 51 (23.0 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 19/59 (32%), Positives = 24/59 (40%)
Query: 407 ESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSET----QDASSEKN 461
ESSC DE G M +DP+ A EN+S+ QD +EKN
Sbjct: 757 ESSCIAGT-GPDEPEKLEGSEEEKMETDPDGQQPEKAENKVENESDEGDKIQDRENEKN 814
Score = 46 (21.3 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 351 QNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHV 392
+N DA+ P A + P S G+ ++ VA ++++V P V
Sbjct: 671 ENSDASLG-PLAYQP--VPFSQSGNPVMSTVAFLASVVDPRV 709
Score = 46 (21.3 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLIK 379
K+GQ++ + K ED+ D + + E K + P D +T +K
Sbjct: 344 KKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVK 400
>UNIPROTKB|Q92922 [details] [associations]
symbol:SMARCC1 "SWI/SNF complex subunit SMARCC1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0071564 "npBAF complex" evidence=ISS] [GO:0071565 "nBAF
complex" evidence=ISS] [GO:0071778 "WINAC complex" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=NAS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0006337 "nucleosome disassembly"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0003713 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884 PROSITE:PS51293
Pathway_Interaction_DB:ar_tf_pathway SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 eggNOG:COG5259 EMBL:U66615
EMBL:BC039843 EMBL:BC065253 EMBL:BC113465 EMBL:BC117213
IPI:IPI00234252 RefSeq:NP_003065.3 UniGene:Hs.476179 PDB:2YUS
PDBsum:2YUS ProteinModelPortal:Q92922 SMR:Q92922 DIP:DIP-27545N
DIP:DIP-33044N IntAct:Q92922 MINT:MINT-1137868 STRING:Q92922
PhosphoSite:Q92922 DMDM:209572723 PaxDb:Q92922 PRIDE:Q92922
DNASU:6599 Ensembl:ENST00000254480 GeneID:6599 KEGG:hsa:6599
UCSC:uc003crq.2 CTD:6599 GeneCards:GC03M047626 H-InvDB:HIX0030795
HGNC:HGNC:11104 HPA:CAB011576 HPA:CAB016336 HPA:HPA024352
HPA:HPA026853 MIM:601732 neXtProt:NX_Q92922 PharmGKB:PA35954
HOGENOM:HOG000047736 HOVERGEN:HBG054849 InParanoid:Q92922 KO:K11649
OMA:YKKYVHA OrthoDB:EOG4V9TSW PhylomeDB:Q92922 ChiTaRS:SMARCC1
EvolutionaryTrace:Q92922 GenomeRNAi:6599 NextBio:25671
ArrayExpress:Q92922 Bgee:Q92922 CleanEx:HS_SMARCC1
Genevestigator:Q92922 GermOnline:ENSG00000173473 Uniprot:Q92922
Length = 1105
Score = 233 (87.1 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 451 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 510
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 511 CRRNLTGDVCAVMRVHAFLEQWGLVNY 537
Score = 128 (50.1 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q ++ L+ ER
Sbjct: 888 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 939
Score = 52 (23.4 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 640 DDWNKVSEHVGSRTQDECILHFLRLP 665
Score = 51 (23.0 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 18/59 (30%), Positives = 24/59 (40%)
Query: 407 ESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSE----TQDASSEKN 461
ESSC DE G M +DP+ A EN+++ QD +EKN
Sbjct: 758 ESSCIAGT-GPDEPEKLEGAEEEKMEADPDGQQPEKAENKVENETDEGDKAQDGENEKN 815
Score = 46 (21.3 bits), Expect = 2.9e-27, Sum P(5) = 2.9e-27
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 351 QNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHV 392
+N DA+ P A + P S G+ ++ VA ++++V P V
Sbjct: 672 ENSDASLG-PLAYQP--VPFSQSGNPVMSTVAFLASVVDPRV 710
Score = 45 (20.9 bits), Expect = 1.0e-25, Sum P(4) = 1.0e-25
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 320 NSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEE 359
N EG A + +N+ E + +++E ++ + TEE
Sbjct: 799 NETDEGDKAQ-DGENEKNSEKEQDSEVSEDTKSEEKETEE 837
Score = 41 (19.5 bits), Expect = 2.6e-25, Sum P(4) = 2.6e-25
Identities = 12/60 (20%), Positives = 29/60 (48%)
Query: 306 AHEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRK 365
A E + P G E + + ++ D K +D +++ +E +Q+ + + E+ ++ K
Sbjct: 776 AEEEKMEADPDGQQPEKAENKVENETDEGD-KAQDGENEKNSEKEQDSEVS-EDTKSEEK 833
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 344 DQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHI 384
D+ +E +E PAK + + G + +Q HI
Sbjct: 409 DEQDEETVTAGGKEDEDPAKGDQSRSVDLGEDNVTEQTNHI 449
Score = 39 (18.8 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 16/66 (24%), Positives = 26/66 (39%)
Query: 315 PTGSLN-SLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDG 373
PT S S K+GQ++ + K ED+ D + + E K + D
Sbjct: 336 PTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNLKKDS 395
Query: 374 GSTLIK 379
+T +K
Sbjct: 396 ENTPVK 401
>ZFIN|ZDB-GENE-080514-3 [details] [associations]
symbol:smarcc1a "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily c, member 1a"
species:7955 "Danio rerio" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-080514-3 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 EMBL:CR391962 IPI:IPI00972152
RefSeq:XP_003200294.1 UniGene:Dr.76866 PRIDE:F1Q9K1
Ensembl:ENSDART00000109259 GeneID:403020 KEGG:dre:403020 CTD:403020
NextBio:20816825 ArrayExpress:F1Q9K1 Bgee:F1Q9K1 Uniprot:F1Q9K1
Length = 1089
Score = 241 (89.9 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 43/87 (49%), Positives = 62/87 (71%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS+++WF ++ IHE ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 446 IPSYAAWFDYNSIHEIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTS 505
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 506 CRRNLTGDVCAVMRVHAFLEQWGLVNY 532
Score = 132 (51.5 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 430 TMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNL-RIRXXXXXXXXXXXXXXXXXX 488
T ++ E+ ++ ++ + E Q+ +K ++ + I
Sbjct: 830 TKTAEKEKEEAMETTEEGKEDEEEQEEGKKKLELDIGEGNIATAAAAALASAATKAKHLA 889
Query: 489 DQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEM-MQLKECLVEERIDVLE 547
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + +Q ++ L E + +E
Sbjct: 890 AVEERKIKSLVALLVETQMKKLELKLRHFEELETIMDREKEALELQRQQLLTERQAFHME 949
Query: 548 RALKTGVSKWR 558
+ LK K R
Sbjct: 950 Q-LKYAEMKAR 959
Score = 59 (25.8 bits), Expect = 3.3e-19, Sum P(3) = 3.3e-19
Identities = 21/97 (21%), Positives = 35/97 (36%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCN-ESSCPREIFDGDEDYLANGLS 427
P S G+ ++ VA ++++V P V P E+ + +
Sbjct: 681 PFSQSGNPVMSTVAFLASVVDPRVAAAAAKAALDEFSRVREEVPAELVEAHVKKVQEAAR 740
Query: 428 SPTMVSDPERALQVD--ASKMEENQSETQDASSEKND 462
S V DP L+ A E +T+ +EK D
Sbjct: 741 STGKV-DPAFGLESSGIAGTAPEEPEKTEPTETEKMD 776
Score = 54 (24.1 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 237 DDFRFSDLGGNSLTHGXXXXXXXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIEL 296
D + +L G G ++ + D+W V+++V ++++ +CI + L
Sbjct: 599 DIYSKKNLKGKGAAGGRDWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRL 658
Query: 297 PFGEFMMGSA 306
P + + S+
Sbjct: 659 PIEDQYLESS 668
Score = 43 (20.2 bits), Expect = 1.4e-17, Sum P(3) = 1.4e-17
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 423 ANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKND 462
++G++ T +PE+ + KM+ + Q +E D
Sbjct: 753 SSGIAG-TAPEEPEKTEPTETEKMDTDSDSQQPDKAESKD 791
>ZFIN|ZDB-GENE-060503-273 [details] [associations]
symbol:smarcc1b "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily c,
member 1b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357
ZFIN:ZDB-GENE-060503-273 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CR626876 EMBL:CR626877 IPI:IPI00972005
Ensembl:ENSDART00000085619 Bgee:E7FAW0 Uniprot:E7FAW0
Length = 961
Score = 236 (88.1 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 43/87 (49%), Positives = 62/87 (71%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
+P+++SWF ++ IH+ ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 427 VPTYASWFDYNCIHQIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTS 486
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV L +V L++WGLIN+
Sbjct: 487 SRRNLTGDVCALIRVHSFLEQWGLINY 513
Score = 129 (50.5 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q ++ L+ ER
Sbjct: 844 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLSER 895
Score = 56 (24.8 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ DCI + LP
Sbjct: 615 DDWNKVSEHVGSRTQDDCILHFLRLP 640
Score = 43 (20.2 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 22/91 (24%), Positives = 38/91 (41%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCNESSCPREIFDGDEDYL-ANGLS 427
P S G+ ++ VA ++++V V E S RE D ++ AN
Sbjct: 662 PFSQSGNPVMSTVAFLASVVDSRVASAAAKAAL----EEFSRARE--DAPSEFFNANFHK 715
Query: 428 SPT--MVSDPERALQVD-ASKMEENQSETQD 455
+P + +P LQ A+ ++ + SE D
Sbjct: 716 APRVRLNLEPAFTLQTGGAAGLDSDLSEKND 746
>POMBASE|SPAC23H3.10 [details] [associations]
symbol:ssr2 "SWI/SNF and RSC complex subunit Ssr2"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IC] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IDA]
[GO:0016586 "RSC complex" evidence=IDA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS01357 PROSITE:PS50135
PROSITE:PS50934 SMART:SM00291 SMART:SM00717 PomBase:SPAC23H3.10
GO:GO:0005737 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000790 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0016586 eggNOG:COG5259
OrthoDB:EOG4PZNGG KO:K11649 EMBL:D89227 PIR:T38303 PIR:T43061
RefSeq:NP_593800.1 ProteinModelPortal:O14470 SMR:O14470
DIP:DIP-48383N STRING:O14470 EnsemblFungi:SPAC23H3.10.1
GeneID:2541851 KEGG:spo:SPAC23H3.10 OMA:TEYLTIT NextBio:20802939
Uniprot:O14470
Length = 503
Score = 249 (92.7 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
+PS++ WF IH+ ER + EFF+G S +TP IYK+YRDFMIN YR EP+ LT T
Sbjct: 20 VPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLTVTA 79
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++LVGDV + +V L++WGLIN+
Sbjct: 80 CRRNLVGDVCAIIRVHAFLEQWGLINY 106
Score = 119 (46.9 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 35/160 (21%), Positives = 61/160 (38%)
Query: 198 CGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDFRFSDLGGNSLTHGXXXXX 257
C +CG C+ Y K + IC C+K G + + DF D +
Sbjct: 193 CFTCGVNCSQTWYHNLKNKKYDICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSN 252
Query: 258 XXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTG 317
++ +GD+W +A +V +++K C+ +++P + + G
Sbjct: 253 QETLLLLEAIETYGDDWNQIALHVGSRTKEQCLIHFLQIPIED-----PYRQKLQ----G 303
Query: 318 SLNSLKEGQSASSENQNDVK-----MEDQVHDQMNESKQN 352
+ K+G EN+N V + V M E KQN
Sbjct: 304 DFSPFKKGFLPFDENENPVLSTLTYLASIVQQGMKERKQN 343
Score = 68 (29.0 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
Identities = 28/118 (23%), Positives = 52/118 (44%)
Query: 415 FDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSE-KNDVPLNLRIRXXX 473
FD +E+ + + L+ + S ++ ++ Q ET +SE KN PL R+
Sbjct: 315 FDENENPVLSTLTY--LASIVQQGMKERKQNESVKQGETSFGNSEFKN--PLE-RVAYYA 369
Query: 474 XXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEM 531
E+R++ LV +I+ Q++KL K+ + LE + E +E+
Sbjct: 370 LKSAAQKAKLIAAF---ENRQLRRLVFSLIQAQLEKLQLKMKVLEQLEKMCSLELSEL 424
Score = 47 (21.6 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 5 QYDPNTKPEFELYTIPSH 22
Q DP T+P F L I H
Sbjct: 107 QIDPETRPAFRLPPISGH 124
Score = 39 (18.8 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 425 GLSSPTMVSDPERALQVDASKMEENQSETQDASSEK 460
G SS V E+ + ME+ + +D S+K
Sbjct: 150 GSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDK 185
>UNIPROTKB|G5EF87 [details] [associations]
symbol:swsn-1 "SWI3-like protein" species:6239
"Caenorhabditis elegans" [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0040018
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 GeneTree:ENSGT00390000018166 EMBL:AF230279
PIR:T26449 RefSeq:NP_001256906.1 UniGene:Cel.7072 SMR:G5EF87
IntAct:G5EF87 EnsemblMetazoa:Y113G7B.23 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 WormBase:Y113G7B.23a
OMA:HFDELEQ NextBio:908892 Uniprot:G5EF87
Length = 789
Score = 216 (81.1 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 2 EMPQY-DPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRD 60
E PQ + N + +PS++ WF ++ IH+ E+ A+ EFF+G + S+TP +Y YR+
Sbjct: 67 EAPQLAEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRN 126
Query: 61 FMINKYREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
FM++ YR P ++ T R++L GDV + ++ L++WGL+N+
Sbjct: 127 FMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNY 171
Score = 140 (54.3 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 50/202 (24%), Positives = 81/202 (40%)
Query: 353 GDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCN-ESSCP 411
G AA E + P S G+ ++ VA ++++V P V + P
Sbjct: 319 GGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIP 378
Query: 412 REIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKN---DVP---- 464
+ + E +A ++ T D L K E + D + N DVP
Sbjct: 379 PLVAEAHEKNVA-AMAEKTGQVDGAVGLTKSGLKPAEEAAGDSDEKMDTNTNDDVPSTTE 437
Query: 465 ----LNLRIRXXXXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDL 520
++ ++ E+R I+ LVA ++ETQMKKL K+ +FD+L
Sbjct: 438 AKSAIDKGVQAAAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDEL 497
Query: 521 ELIMEKEYNEMMQLKECLVEER 542
E IM+KE + + L+ ER
Sbjct: 498 EQIMDKERESLEYQRHQLILER 519
Score = 64 (27.6 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 11/48 (22%), Positives = 27/48 (56%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGE-FMMGSAHEMNSSSCPTGS 318
D+W V +V T+++ +C+ K ++LP + ++ + + + P G+
Sbjct: 274 DDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGA 321
>WB|WBGene00004203 [details] [associations]
symbol:swsn-1 species:6239 "Caenorhabditis elegans"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IGI;IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IGI;IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0046662 "regulation of oviposition" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0035262 "gonad
morphogenesis" evidence=IMP] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003677
GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0046662 GO:GO:0040035
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0040027 GO:GO:0035262
EMBL:AL110477 KO:K11649 UniGene:Cel.7072 GeneID:180324
KEGG:cel:CELE_Y113G7B.23 CTD:180324 RefSeq:NP_001256907.1
ProteinModelPortal:H8ESF3 SMR:H8ESF3 WormBase:Y113G7B.23c
Uniprot:H8ESF3
Length = 792
Score = 216 (81.1 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 38/105 (36%), Positives = 66/105 (62%)
Query: 2 EMPQY-DPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRD 60
E PQ + N + +PS++ WF ++ IH+ E+ A+ EFF+G + S+TP +Y YR+
Sbjct: 67 EAPQLAEGNVIEQTHYIVVPSYAGWFDYNAIHQIEKRAMPEFFNGKNKSKTPDVYVAYRN 126
Query: 61 FMINKYREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
FM++ YR P ++ T R++L GDV + ++ L++WGL+N+
Sbjct: 127 FMVDTYRLNPFEYVSATACRRNLAGDVCSIVRLHSFLEQWGLLNY 171
Score = 140 (54.3 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 50/202 (24%), Positives = 81/202 (40%)
Query: 353 GDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCN-ESSCP 411
G AA E + P S G+ ++ VA ++++V P V + P
Sbjct: 319 GGAAKEVLGPLAFQPVPFSQSGNPVMSTVAFLASVVDPQVAAAATKAAMEEFGKLKEEIP 378
Query: 412 REIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKN---DVP---- 464
+ + E +A ++ T D L K E + D + N DVP
Sbjct: 379 PLVAEAHEKNVA-AMAEKTGQVDGAVGLTKSGLKPAEEAAGDSDEKMDTNTNDDVPSTTE 437
Query: 465 ----LNLRIRXXXXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDL 520
++ ++ E+R I+ LVA ++ETQMKKL K+ +FD+L
Sbjct: 438 AKSAIDKGVQAAAASCLAAAAVKAKHLAQIEERRIKSLVAQLVETQMKKLEMKLRHFDEL 497
Query: 521 ELIMEKEYNEMMQLKECLVEER 542
E IM+KE + + L+ ER
Sbjct: 498 EQIMDKERESLEYQRHQLILER 519
Score = 64 (27.6 bits), Expect = 2.5e-26, Sum P(3) = 2.5e-26
Identities = 11/48 (22%), Positives = 27/48 (56%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGE-FMMGSAHEMNSSSCPTGS 318
D+W V +V T+++ +C+ K ++LP + ++ + + + P G+
Sbjct: 274 DDWNKVCDHVGTRTQHECVLKFLQLPIQDPYLTENLSSDKAEAAPGGA 321
>RGD|1304850 [details] [associations]
symbol:Smarcc1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 1"
species:10116 "Rattus norvegicus" [GO:0001741 "XY body"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA;ISO] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337
"nucleosome disassembly" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0008286 "insulin receptor signaling
pathway" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0071778
"WINAC complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 RGD:1304850
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 IPI:IPI00764046
Ensembl:ENSRNOT00000028250 ArrayExpress:D4A4J7 Uniprot:D4A4J7
Length = 1086
Score = 233 (87.1 bits), Expect = 2.9e-26, Sum P(4) = 2.9e-26
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 450 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 509
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 510 CRRNLTGDVCAVMRVHAFLEQWGLVNY 536
Score = 132 (51.5 bits), Expect = 2.9e-26, Sum P(4) = 2.9e-26
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 406 NESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKND--- 462
NES +I DG+ + N S SD ++ + + EEN+ T ++D
Sbjct: 798 NESDEGDKIQDGENE--KN--SEKERDSDTSEDVKPEEKENEENKELTDTCKERESDTGK 853
Query: 463 --VPLNL---RIRXXXXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYF 517
V + + E+R+I+ LVA+++ETQMKKL K+ +F
Sbjct: 854 KKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHF 913
Query: 518 DDLELIMEKEYNEMMQLKECLVEER 542
++LE IM++E + Q ++ L+ ER
Sbjct: 914 EELETIMDREKEALEQQRQQLLTER 938
Score = 52 (23.4 bits), Expect = 2.9e-26, Sum P(4) = 2.9e-26
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 639 DDWNKVSEHVGSRTQDECILHFLRLP 664
Score = 52 (23.4 bits), Expect = 3.9e-18, Sum P(4) = 3.9e-18
Identities = 19/59 (32%), Positives = 24/59 (40%)
Query: 407 ESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSET----QDASSEKN 461
ESSC DE G M +DP+ A EN+S+ QD +EKN
Sbjct: 757 ESSCIAGT-GPDEPEKLEGSEEEKMETDPDGQQPEKAENKGENESDEGDKIQDGENEKN 814
Score = 48 (22.0 bits), Expect = 5.7e-17, Sum P(3) = 5.7e-17
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 320 NSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATE-EPPAKRKRIA-PLSDG 373
NS KE S +SE DVK E++ ++ E+K+ D E E +K++ +S+G
Sbjct: 814 NSEKERDSDTSE---DVKPEEKENE---ENKELTDTCKERESDTGKKKVEHEISEG 863
Score = 46 (21.3 bits), Expect = 2.9e-26, Sum P(4) = 2.9e-26
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 351 QNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHV 392
+N DA+ P A + P S G+ ++ VA ++++V P V
Sbjct: 671 ENSDASLG-PLAYQP--VPFSQSGNPVMSTVAFLASVVDPRV 709
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLIK 379
K+GQ++ + + K ED+ D + + E K + P D +T +K
Sbjct: 344 KKGQASLYGKRRNQKDEDEQEDLTKDMEDPTPVPNIEEVLLPKNVNPKKDSENTPVK 400
Score = 43 (20.2 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 10/39 (25%), Positives = 22/39 (56%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNE--SKQNGDAATEE 359
++ + A ++ +N+ D++ D NE S++ D+ T E
Sbjct: 787 QQPEKAENKGENESDEGDKIQDGENEKNSEKERDSDTSE 825
>UNIPROTKB|G3N0H4 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:DAAA02054442 Ensembl:ENSBTAT00000065210 Uniprot:G3N0H4
Length = 925
Score = 233 (87.1 bits), Expect = 3.0e-26, Sum P(4) = 3.0e-26
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 387 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 446
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 447 CRRNLTGDVCAVMRVHAFLEQWGLVNY 473
Score = 128 (50.1 bits), Expect = 3.0e-26, Sum P(4) = 3.0e-26
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q ++ L+ ER
Sbjct: 844 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 895
Score = 52 (23.4 bits), Expect = 3.0e-26, Sum P(4) = 3.0e-26
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 577 DDWNKVSEHVGSRTQDECILHFLRLP 602
Score = 49 (22.3 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 315 PTGSLN-SLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDG 373
PT S S K+GQ++ + K ED+ D + + E K + P D
Sbjct: 272 PTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDS 331
Query: 374 GSTLIK 379
+T +K
Sbjct: 332 ENTPVK 337
Score = 46 (21.3 bits), Expect = 3.0e-26, Sum P(4) = 3.0e-26
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 351 QNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHV 392
+N DA+ P A + P S G+ ++ VA ++++V P V
Sbjct: 609 ENSDASLG-PLAYQP--VPFSQSGNPVMSTVAFLASVVDPRV 647
Score = 38 (18.4 bits), Expect = 2.0e-25, Sum P(4) = 2.0e-25
Identities = 12/57 (21%), Positives = 28/57 (49%)
Query: 311 SSSCPTGSLNSLKEGQSASSENQNDV--KMEDQVHDQMNESKQNGDAATEEPPAKRK 365
S + G L ++ EN+ D K +D +++ +E +Q+ + + E+ ++ K
Sbjct: 734 SLAASKGGLMHIQLKAENKGENETDEGDKAQDGENEKNSEKEQDSEVS-EDTKSEEK 789
>ASPGD|ASPL0000005061 [details] [associations]
symbol:AN6705 species:162425 "Emericella nidulans"
[GO:0016586 "RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015616 "DNA translocase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000433
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 GO:GO:0005634 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:BN001301 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACD01000112 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 RefSeq:XP_664309.1 ProteinModelPortal:Q5AYC5
STRING:Q5AYC5 EnsemblFungi:CADANIAT00007492 GeneID:2870489
KEGG:ani:AN6705.2 HOGENOM:HOG000180903 OMA:SKTPAVY Uniprot:Q5AYC5
Length = 681
Score = 243 (90.6 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 44/87 (50%), Positives = 60/87 (68%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
+PS+S+WF IH E+ AL EFF+G + S+TP +YK+YRDFMIN YR P LT T
Sbjct: 107 LPSYSTWFDMHTIHPIEKKALAEFFNGRNRSKTPAVYKDYRDFMINTYRLNPIEYLTVTA 166
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGLIN+
Sbjct: 167 CRRNLAGDVCAIMRVHSFLEQWGLINY 193
Score = 91 (37.1 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 27/130 (20%), Positives = 53/130 (40%)
Query: 194 KGFKCGSCGEQCNSGCYEYSKQ----GS------FVICEKCFKNGNYGEDKSKDDF-RFS 242
K +C SCG C + Y+K G+ + +C CF G + DF +
Sbjct: 308 KKIQCFSCGIDCTRLRFHYAKSTPATGTAAPDSKYDLCPNCFLQGRMPSSHNASDFVKLE 367
Query: 243 DLGGNSLTHGXXXXXXXXXXXXXSVMRHGD-NWELVAQNVPTKSKLDCISKLIELPFGEF 301
D + + + + D NWE +A +V T+++ +C+ K ++L +
Sbjct: 368 DSSYSRIPDREAPWSDSELLLLLEGLENFDENWEQIANHVGTRTREECVMKFLQLEIEDQ 427
Query: 302 MMGSAHEMNS 311
+ + E+ +
Sbjct: 428 YLEDSPEVRA 437
Score = 77 (32.2 bits), Expect = 4.4e-26, Sum P(3) = 4.4e-26
Identities = 23/113 (20%), Positives = 50/113 (44%)
Query: 436 ERALQVDASKMEENQSETQDASSEKNDVPLNLRIRXXXXXXXXXXXXXXXXXXDQEDREI 495
E ++ VD ++ EE + T+ + + N+ + E+RE+
Sbjct: 514 EDSMDVDTAR-EEPSTSTESSDKQPKASLANVAL--------GAAAARAGALASHEEREM 564
Query: 496 EHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEERIDVLER 548
LV+ + ++K K+ F+++E I+E E E+ ++ L +R+ +R
Sbjct: 565 TRLVSAAVNVTLQKFEIKLQQFNEMEEIIEAERRELELARQQLFLDRLAFKKR 617
>UNIPROTKB|F1MYU1 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0006337 "nucleosome
disassembly" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001741 "XY body" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0009887 GO:GO:0071564 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GO:GO:0001741 GO:GO:0071778 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:DAAA02054442 IPI:IPI01002084
Ensembl:ENSBTAT00000044741 Uniprot:F1MYU1
Length = 952
Score = 233 (87.1 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 387 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 446
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 447 CRRNLTGDVCAVMRVHAFLEQWGLVNY 473
Score = 128 (50.1 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q ++ L+ ER
Sbjct: 824 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 875
Score = 58 (25.5 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 39/191 (20%), Positives = 74/191 (38%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSE 331
D+W V+++V ++++ +CI + LP + + E + +S + + QS +
Sbjct: 576 DDWNKVSEHVGSRTQDECILHFLRLPIEDPYL----ENSDASLGPLAYQPVPFSQSGNPV 631
Query: 332 NQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIA-PLSDGGSTLIKQVAHISTMVGP 390
+ V V D S AA EE R+ + L + +++ A S V P
Sbjct: 632 -MSTVAFLASVVDPRVASAA-AKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP 689
Query: 391 HVTXXXXXXXXXXLCNESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQ 450
+ E +G E+ + + T PE+A ++ +E
Sbjct: 690 -----TYGLESSCIAGTGPDEPEKLEGAEE---EKMETDTDAQQPEKAENKGENETDEGD 741
Query: 451 SETQDASSEKN 461
+ QD +EKN
Sbjct: 742 -KAQDGENEKN 751
Score = 49 (22.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 315 PTGSLN-SLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDG 373
PT S S K+GQ++ + K ED+ D + + E K + P D
Sbjct: 272 PTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDS 331
Query: 374 GSTLIK 379
+T +K
Sbjct: 332 ENTPVK 337
Score = 39 (18.8 bits), Expect = 4.3e-24, Sum P(3) = 4.3e-24
Identities = 9/46 (19%), Positives = 22/46 (47%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNES---KQNGDAATEEPPAKRK 365
++ + A ++ +N+ D+ D NE K+ +E+ ++ K
Sbjct: 724 QQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEK 769
>UNIPROTKB|F1N4N6 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR007526 InterPro:IPR009057
Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
SMART:SM00717 InterPro:IPR001357 GO:GO:0017053 GO:GO:0045892
GO:GO:0045893 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
GeneTree:ENSGT00390000018166 OMA:QYIQAEP EMBL:DAAA02013534
IPI:IPI00712028 Ensembl:ENSBTAT00000019562 Uniprot:F1N4N6
Length = 1094
Score = 237 (88.5 bits), Expect = 8.4e-26, Sum P(4) = 8.4e-26
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 377 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 436
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 437 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 476
Score = 125 (49.1 bits), Expect = 8.4e-26, Sum P(4) = 8.4e-26
Identities = 34/131 (25%), Positives = 60/131 (45%)
Query: 416 DGD-EDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNL---RIRX 471
DGD E PT +DPE+ + + E + + K V ++ +
Sbjct: 798 DGDSEKESEKSDGDPT--ADPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLST 855
Query: 472 XXXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEM 531
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E +
Sbjct: 856 AAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREAL 915
Query: 532 MQLKECLVEER 542
++ L+ +R
Sbjct: 916 EYQRQQLLADR 926
Score = 52 (23.4 bits), Expect = 8.4e-26, Sum P(4) = 8.4e-26
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 613 DDWNKVSEHVGSRTQDECILHFLRLP 638
Score = 46 (21.3 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 146 PNSLKPISVPNSGADGSGNGKVAVAGETGVKLPP 179
PN P S+ GSG+ VA + G LPP
Sbjct: 1047 PNQQTPPSMMPGAVPGSGHPGVA---DPGTPLPP 1077
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 14/68 (20%), Positives = 25/68 (36%)
Query: 298 FGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAAT 357
F E+M +E+N P + N D D+ + K++ + +
Sbjct: 212 FNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRS-PSPS 270
Query: 358 EEPPAKRK 365
P AK+K
Sbjct: 271 PTPEAKKK 278
Score = 44 (20.5 bits), Expect = 8.4e-26, Sum P(4) = 8.4e-26
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 660 PFSQSGNPVMSTVAFLASVVDPRV 683
Score = 43 (20.2 bits), Expect = 6.6e-17, Sum P(3) = 6.6e-17
Identities = 15/65 (23%), Positives = 34/65 (52%)
Query: 317 GSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGST 376
G++ + +++ + ++D K +D ++ +E K +GD + P K K P +G
Sbjct: 775 GTVEEEAKEKTSEAPKKDDEKGKDGDSEKESE-KSDGDPTAD--PEKEKE--P-KEGQEE 828
Query: 377 LIKQV 381
++K+V
Sbjct: 829 VLKEV 833
>UNIPROTKB|F1SM00 [details] [associations]
symbol:LOC100621845 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
EMBL:CU498845 Ensembl:ENSSSCT00000000410 OMA:AWFDYNX Uniprot:F1SM00
Length = 1167
Score = 237 (88.5 bits), Expect = 1.9e-25, Sum P(4) = 1.9e-25
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 425 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 484
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 485 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 524
Score = 123 (48.4 bits), Expect = 1.9e-25, Sum P(4) = 1.9e-25
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 434 DPERALQVDASKMEENQSETQDASSEKNDVPLNL---RIRXXXXXXXXXXXXXXXXXXDQ 490
DPE+ + + EE E + K V ++ +
Sbjct: 867 DPEKEKEPKEGQ-EEVLKEVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAV 925
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + ++ L+ +R
Sbjct: 926 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 977
Score = 52 (23.4 bits), Expect = 1.9e-25, Sum P(4) = 1.9e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 661 DDWNKVSEHVGSRTQDECILHFLRLP 686
Score = 46 (21.3 bits), Expect = 4.2e-16, Sum P(2) = 4.2e-16
Identities = 14/39 (35%), Positives = 17/39 (43%)
Query: 146 PNSLKPISVPNSGADGSGNGKVAVAGETGVKLPPLASYL 184
P S+ P +VP SG G A+ L P AS L
Sbjct: 1103 PPSMMPGAVPGSGHPGVAAQSPAIVAAVQGNLLPSASPL 1141
Score = 45 (20.9 bits), Expect = 0.00096, Sum P(3) = 0.00096
Identities = 14/68 (20%), Positives = 25/68 (36%)
Query: 298 FGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAAT 357
F E+M +E+N P + N D D+ + K++ + +
Sbjct: 260 FNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRKRS-PSPS 318
Query: 358 EEPPAKRK 365
P AK+K
Sbjct: 319 PTPEAKKK 326
Score = 44 (20.5 bits), Expect = 1.9e-25, Sum P(4) = 1.9e-25
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 708 PFSQSGNPVMSTVAFLASVVDPRV 731
>UNIPROTKB|E2REF0 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0008286
GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0009887 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 CTD:6599 KO:K11649 OMA:YKKYVHA
GeneTree:ENSGT00390000018166 EMBL:AAEX03012237 EMBL:AAEX03012238
RefSeq:XP_533845.2 ProteinModelPortal:E2REF0
Ensembl:ENSCAFT00000020868 GeneID:476640 KEGG:cfa:476640
NextBio:20852260 Uniprot:E2REF0
Length = 1107
Score = 233 (87.1 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 451 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 510
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 511 CRRNLTGDVCAVMRVHAFLEQWGLVNY 537
Score = 128 (50.1 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 24/52 (46%), Positives = 40/52 (76%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q ++ L+ ER
Sbjct: 888 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTER 939
Score = 54 (24.1 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 39/191 (20%), Positives = 74/191 (38%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSE 331
D+W V+++V ++++ +CI + LP + + E + +S + + QS +
Sbjct: 640 DDWNKVSEHVGSRTQDECILHFLRLPIEDPYL----ENSDASLGPLAYQPVPFSQSGNPV 695
Query: 332 NQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIA-PLSDGGSTLIKQVAHISTMVGP 390
+ V V D S AA EE R+ + L + +++ A S V P
Sbjct: 696 -MSTVAFLASVVDPRVASAA-AKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP 753
Query: 391 HVTXXXXXXXXXXLCNESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQ 450
+ E +G E+ + + T PE+A ++ +E
Sbjct: 754 -----TYGLESSCIAGTGPDEPEKLEGAEE---EKMEADTDGQHPEKAENKGENETDEGD 805
Query: 451 SETQDASSEKN 461
+ QD +EKN
Sbjct: 806 -KAQDGENEKN 815
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 315 PTGSLN-SLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDG 373
PT S S K+GQ++ + K ED+ D + + E K + P D
Sbjct: 336 PTESRKKSGKKGQASLYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDS 395
Query: 374 GSTLIK 379
+T +K
Sbjct: 396 ENTPVK 401
Score = 45 (20.9 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 320 NSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEE 359
N EG A + +N+ E + +++E ++ + TEE
Sbjct: 799 NETDEGDKAQ-DGENEKNSEKEQDSEVSEDTKSEEKETEE 837
Score = 38 (18.4 bits), Expect = 1.0e-23, Sum P(3) = 1.0e-23
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 326 QSASSENQNDVKMEDQVHDQMNES---KQNGDAATEEPPAKRK 365
+ A ++ +N+ D+ D NE K+ +E+ ++ K
Sbjct: 791 EKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEK 833
>UNIPROTKB|I3LRY4 [details] [associations]
symbol:I3LRY4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:CU694915 Ensembl:ENSSSCT00000032096 Uniprot:I3LRY4
Length = 1212
Score = 237 (88.5 bits), Expect = 2.3e-25, Sum P(4) = 2.3e-25
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 379 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 438
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 439 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 478
Score = 123 (48.4 bits), Expect = 2.3e-25, Sum P(4) = 2.3e-25
Identities = 30/112 (26%), Positives = 54/112 (48%)
Query: 434 DPERALQVDASKMEENQSETQDASSEKNDVPLNL---RIRXXXXXXXXXXXXXXXXXXDQ 490
DPE+ + + EE E + K V ++ +
Sbjct: 821 DPEKEKEPKEGQ-EEVLKEVESEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAV 879
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + ++ L+ +R
Sbjct: 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 931
Score = 57 (25.1 bits), Expect = 3.3e-17, Sum P(2) = 3.3e-17
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 146 PNSLKPISVPNSGADG-SGNGKVAVAGETGVKLPPLASYLDVFGDL 190
P S+ P +VP SG G +GN + + G+ PP A + FG L
Sbjct: 1057 PPSMMPGAVPGSGHPGVAGNAPLGLP--FGMPPPPPAPSIIPFGSL 1100
Score = 52 (23.4 bits), Expect = 2.3e-25, Sum P(4) = 2.3e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 615 DDWNKVSEHVGSRTQDECILHFLRLP 640
Score = 44 (20.5 bits), Expect = 2.3e-25, Sum P(4) = 2.3e-25
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 662 PFSQSGNPVMSTVAFLASVVDPRV 685
>RGD|1597704 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=ISO] [GO:0071565 "nBAF complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0017053 "transcriptional repressor
complex" evidence=ISO] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
RGD:1597704 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 KO:K11649
GeneTree:ENSGT00390000018166 IPI:IPI00393081 RefSeq:XP_001055673.1
ProteinModelPortal:D4A510 PhosphoSite:D4A510
Ensembl:ENSRNOT00000028244 GeneID:685179 KEGG:rno:685179
UCSC:RGD:1597704 NextBio:729140 ArrayExpress:D4A510 Uniprot:D4A510
Length = 1135
Score = 236 (88.1 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
Identities = 42/100 (42%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + +PS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 413 HEDNVTEQTHHIIVPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 472
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 473 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 119 (46.9 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + ++ L+ +R
Sbjct: 911 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 962
Score = 52 (23.4 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 649 DDWNKVSEHVGSRTQDECILHFLRLP 674
Score = 47 (21.6 bits), Expect = 2.8e-25, Sum P(4) = 2.8e-25
Identities = 23/109 (21%), Positives = 42/109 (38%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCN-ESSCPREIFDG-----DEDYL 422
P S G+ ++ VA ++++V P V + P + + +E
Sbjct: 696 PFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAK 755
Query: 423 ANGLSSP-----------TMVSDPERALQVDASKMEENQSETQDASSEK 460
G + P T +PER ++ S EE ++E+Q A +K
Sbjct: 756 VTGKADPAFGLESSGIAGTASDEPER---IEESGTEEARAESQAADEKK 801
Score = 46 (21.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 146 PNSLKPISVPNSGADGSGNGKVAVAGETGVKLPP 179
PN P S+ GSG+ VA + G LPP
Sbjct: 1088 PNQQTPPSMMPGAVPGSGHPGVA---DPGTPLPP 1118
Score = 43 (20.2 bits), Expect = 7.1e-25, Sum P(4) = 7.1e-25
Identities = 12/48 (25%), Positives = 23/48 (47%)
Query: 323 KEGQSASSENQNDVKMEDQVHD-----QMNESKQNGDAATEEPPAKRK 365
++G+ A SE +++ D + D + E ++ G EP +RK
Sbjct: 830 EKGKEADSEKESEKSDGDPIVDPEKDKEPTEGQEEGLKEVAEPEGERK 877
>UNIPROTKB|F1PVA9 [details] [associations]
symbol:SMARCC2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GeneTree:ENSGT00390000018166
OMA:QYIQAEP EMBL:AAEX03006920 Ensembl:ENSCAFT00000000173
Uniprot:F1PVA9
Length = 1092
Score = 237 (88.5 bits), Expect = 3.4e-25, Sum P(4) = 3.4e-25
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 406 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 465
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 466 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 505
Score = 119 (46.9 bits), Expect = 3.4e-25, Sum P(4) = 3.4e-25
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + ++ L+ +R
Sbjct: 873 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 924
Score = 52 (23.4 bits), Expect = 3.4e-25, Sum P(4) = 3.4e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 611 DDWNKVSEHVGSRTQDECILHFLRLP 636
Score = 44 (20.5 bits), Expect = 3.4e-25, Sum P(4) = 3.4e-25
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 658 PFSQSGNPVMSTVAFLASVVDPRV 681
Score = 43 (20.2 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 146 PNSLKPISVPNSGADGSGNGKVAVAGETGVKLPP 179
PN P ++ GSG+ VA + G LPP
Sbjct: 1045 PNQQTPPAMMPGAVPGSGHPGVA---DPGTPLPP 1075
>UNIPROTKB|F1P1A8 [details] [associations]
symbol:F1P1A8 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0001741
"XY body" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0008286
"insulin receptor signaling pathway" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071778
"WINAC complex" evidence=IEA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0008286 GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0071565 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337 GO:GO:0001741
GO:GO:0071778 OMA:YKKYVHA GeneTree:ENSGT00390000018166
EMBL:AADN02000062 EMBL:AADN02000057 EMBL:AADN02000058
EMBL:AADN02000059 EMBL:AADN02000060 EMBL:AADN02000061
IPI:IPI00575887 Ensembl:ENSGALT00000008096 Uniprot:F1P1A8
Length = 1035
Score = 234 (87.4 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 44/87 (50%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 386 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 445
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGLIN+
Sbjct: 446 CRRNLTGDVCAVMRVHAFLEQWGLINY 472
Score = 134 (52.2 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 37/128 (28%), Positives = 61/128 (47%)
Query: 418 DEDYLANGLSSPTMVSDPERALQVDASK---MEENQSETQDASSEKNDVPLNLRIRXXXX 474
+++ A + P E VDASK ME + + + SE N +
Sbjct: 754 EQESEATADTKPEEKEAEENKENVDASKDKEMEAGKKKVEHEISEGN-------VATAAA 806
Query: 475 XXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQL 534
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + Q
Sbjct: 807 AALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQ 866
Query: 535 KECLVEER 542
++ L+ ER
Sbjct: 867 RQQLLTER 874
Score = 57 (25.1 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 39/191 (20%), Positives = 75/191 (39%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSE 331
D+W V+++V ++++ +CI + LP + + E + +S + + QS +
Sbjct: 575 DDWNKVSEHVGSRTQDECILHFLRLPIEDPYL----ENSDASLGPLAYQPVPFSQSGNPV 630
Query: 332 NQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIA-PLSDGGSTLIKQVAHISTMVGP 390
+ V V D S AA EE R+ + L + +++ A S V P
Sbjct: 631 -MSTVAFLASVVDPRVASAA-AKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP 688
Query: 391 HVTXXXXXXXXXXLCNESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQ 450
+ E DG E+ + + T PE+ S++EE +
Sbjct: 689 -----TYGLESSCIAGTGPDEPEKMDGAEE---EKMETETDGQQPEKVESKAESEIEEGE 740
Query: 451 SETQDASSEKN 461
+ Q+ +E+N
Sbjct: 741 -KVQEGENERN 750
Score = 45 (20.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 17/74 (22%), Positives = 27/74 (36%)
Query: 307 HEMNSSSCPTGSLN-SLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRK 365
H + P S S K+GQ+ + K ED+ D + + E K
Sbjct: 263 HSPSPPPTPVESRKKSGKKGQATIYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPK 322
Query: 366 RIAPLSDGGSTLIK 379
+ P D +T +K
Sbjct: 323 NVNPKKDSENTPVK 336
Score = 44 (20.5 bits), Expect = 3.4e-25, Sum P(3) = 3.4e-25
Identities = 9/50 (18%), Positives = 21/50 (42%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSD 372
+E ++ Q K+E + ++ E ++ + E P K + +D
Sbjct: 713 EEKMETETDGQQPEKVESKAESEIEEGEKVQEGENERNPEKEQESEATAD 762
>UNIPROTKB|Q8TAQ2 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IDA] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0017053
"transcriptional repressor complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0003713
"transcription coactivator activity" evidence=NAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
GO:GO:0045892 GO:GO:0045893 GO:GO:0007399 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
GO:GO:0003713 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 UniGene:Hs.632717 EMBL:AC073896 HOGENOM:HOG000047736
HOVERGEN:HBG054849 KO:K11649 EMBL:U66616 EMBL:BT009924
EMBL:AB209006 EMBL:BC009067 EMBL:BC013045 EMBL:BC026222
IPI:IPI00150057 IPI:IPI00216047 IPI:IPI00793163
RefSeq:NP_001123892.1 RefSeq:NP_003066.2 RefSeq:NP_620706.1
UniGene:Hs.236030 ProteinModelPortal:Q8TAQ2 SMR:Q8TAQ2
DIP:DIP-27611N IntAct:Q8TAQ2 MINT:MINT-1151033 STRING:Q8TAQ2
PhosphoSite:Q8TAQ2 DMDM:57012959 PaxDb:Q8TAQ2 PeptideAtlas:Q8TAQ2
PRIDE:Q8TAQ2 DNASU:6601 Ensembl:ENST00000267064
Ensembl:ENST00000347471 Ensembl:ENST00000394023 GeneID:6601
KEGG:hsa:6601 UCSC:uc001ska.3 UCSC:uc001skb.3 CTD:6601
GeneCards:GC12M056555 HGNC:HGNC:11105 HPA:CAB004321 HPA:HPA021213
MIM:601734 neXtProt:NX_Q8TAQ2 PharmGKB:PA35955 InParanoid:Q8TAQ2
PhylomeDB:Q8TAQ2 ChiTaRS:SMARCC2 GenomeRNAi:6601 NextBio:25677
ArrayExpress:Q8TAQ2 Bgee:Q8TAQ2 CleanEx:HS_SMARCC2
Genevestigator:Q8TAQ2 GermOnline:ENSG00000139613 Uniprot:Q8TAQ2
Length = 1214
Score = 237 (88.5 bits), Expect = 3.7e-25, Sum P(4) = 3.7e-25
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 413 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 472
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 473 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 121 (47.7 bits), Expect = 3.7e-25, Sum P(4) = 3.7e-25
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 416 DGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNL---RIRXX 472
+GD + + +V DPE+ + + E + + K V ++ +
Sbjct: 803 EGDSEKESEKSDGDPIV-DPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTA 861
Query: 473 XXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMM 532
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E +
Sbjct: 862 AAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALE 921
Query: 533 QLKECLVEER 542
++ L+ +R
Sbjct: 922 YQRQQLLADR 931
Score = 53 (23.7 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 146 PNSLKPISVPNSGADG-SGNGKVAVAGETGVKLPPLASYLDVFGDL 190
P S+ P +VP SG G +GN + + PP A + FG L
Sbjct: 1057 PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSL 1102
Score = 52 (23.4 bits), Expect = 3.7e-25, Sum P(4) = 3.7e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 618 DDWNKVSEHVGSRTQDECILHFLRLP 643
Score = 44 (20.5 bits), Expect = 3.7e-25, Sum P(4) = 3.7e-25
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 665 PFSQSGNPVMSTVAFLASVVDPRV 688
Score = 38 (18.4 bits), Expect = 3.3e-16, Sum P(3) = 3.3e-16
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNES-KQNGDAATEEPPAKRKRIAPLSDGGSTLIKQV 381
+E + +SE + + + D ES K +GD + P K K P +G ++K+V
Sbjct: 784 EEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVD--PEKEKE--P-KEGQEEVLKEV 838
>UNIPROTKB|F8VXC8 [details] [associations]
symbol:SMARCC2 "SWI/SNF complex subunit SMARCC2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00298 SMART:SM00717 InterPro:IPR001357 GO:GO:0005634
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 SUPFAM:SSF52113 EMBL:AC073896 HGNC:HGNC:11105
ChiTaRS:SMARCC2 OMA:QYIQAEP IPI:IPI01021606
ProteinModelPortal:F8VXC8 SMR:F8VXC8 PRIDE:F8VXC8
Ensembl:ENST00000550164 ArrayExpress:F8VXC8 Bgee:F8VXC8
Uniprot:F8VXC8
Length = 1245
Score = 237 (88.5 bits), Expect = 4.3e-25, Sum P(4) = 4.3e-25
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 413 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 472
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 473 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 121 (47.7 bits), Expect = 4.3e-25, Sum P(4) = 4.3e-25
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 416 DGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNL---RIRXX 472
+GD + + +V DPE+ + + E + + K V ++ +
Sbjct: 834 EGDSEKESEKSDGDPIV-DPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTA 892
Query: 473 XXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMM 532
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E +
Sbjct: 893 AAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALE 952
Query: 533 QLKECLVEER 542
++ L+ +R
Sbjct: 953 YQRQQLLADR 962
Score = 53 (23.7 bits), Expect = 9.4e-17, Sum P(2) = 9.4e-17
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 146 PNSLKPISVPNSGADG-SGNGKVAVAGETGVKLPPLASYLDVFGDL 190
P S+ P +VP SG G +GN + + PP A + FG L
Sbjct: 1088 PPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSL 1133
Score = 52 (23.4 bits), Expect = 4.3e-25, Sum P(4) = 4.3e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 649 DDWNKVSEHVGSRTQDECILHFLRLP 674
Score = 44 (20.5 bits), Expect = 4.3e-25, Sum P(4) = 4.3e-25
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 696 PFSQSGNPVMSTVAFLASVVDPRV 719
Score = 38 (18.4 bits), Expect = 3.6e-16, Sum P(3) = 3.6e-16
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 323 KEGQSASSENQNDVKMEDQVHDQMNES-KQNGDAATEEPPAKRKRIAPLSDGGSTLIKQV 381
+E + +SE + + + D ES K +GD + P K K P +G ++K+V
Sbjct: 815 EEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVD--PEKEKE--P-KEGQEEVLKEV 869
>POMBASE|SPAC17G6.10 [details] [associations]
symbol:ssr1 "SWI/SNF and RSC complex subunit Ssr1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=NAS] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=IDA] [GO:0016586 "RSC complex" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=NAS] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 PomBase:SPAC17G6.10 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0000122
GO:GO:0000790 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0016586 HSSP:P32591 eggNOG:COG5259 OrthoDB:EOG4PZNGG
KO:K11649 PIR:T37842 RefSeq:NP_594257.1 ProteinModelPortal:O13788
DIP:DIP-48380N STRING:O13788 EnsemblFungi:SPAC17G6.10.1
GeneID:2542400 KEGG:spo:SPAC17G6.10 OMA:LCARCYV NextBio:20803459
Uniprot:O13788
Length = 527
Score = 234 (87.4 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 41/87 (47%), Positives = 59/87 (67%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
+P + WF + +HE E+ EFFDG + S+TP++YKEYRDFMI+ +R LTFT
Sbjct: 54 VPEWAQWFDFSKVHEIEKKQNPEFFDGKNTSKTPEVYKEYRDFMISTFRLNSKVYLTFTA 113
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V R L++WGLIN+
Sbjct: 114 CRRNLAGDVCAVLRVHRFLEQWGLINY 140
Score = 106 (42.4 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 26/113 (23%), Positives = 44/113 (38%)
Query: 198 CGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDFRFSDLGGNSLTHGXXXXX 257
C CG + N Y+ + +C C++ + + D++ + N +
Sbjct: 237 CYCCGNKFNESYYQSQTAQKYNVCISCYQQNRFPSPTTIADYKEVAIQ-NKIEDDDTWTA 295
Query: 258 XXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIELPFGE---FMMGSAH 307
V + D+W VA +V TKS +CI K + LP + F M H
Sbjct: 296 QELVLLSEGVEMYSDDWAKVASHVNTKSVEECILKFLNLPSSDKALFKMDKVH 348
Score = 55 (24.4 bits), Expect = 5.3e-25, Sum P(3) = 5.3e-25
Identities = 10/53 (18%), Positives = 29/53 (54%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEERI 543
E++++ ++ + Q+K + SK+++FD L+ + + E+ + E++
Sbjct: 429 EEKKMASIIKDSVNVQIKLIESKLSHFDYLDQHIRLKSQELDAFAQATYREKL 481
>MGI|MGI:1915344 [details] [associations]
symbol:Smarcc2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily c, member 2"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=ISO] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=IDA] [GO:0071565 "nBAF
complex" evidence=IDA] InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00298 SMART:SM00717 InterPro:IPR001357
MGI:MGI:1915344 GO:GO:0017053 GO:GO:0045892 GO:GO:0045893
GO:GO:0007399 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
InterPro:IPR017884 PROSITE:PS51293 SUPFAM:SSF52113 GO:GO:0006337
eggNOG:COG5259 HOGENOM:HOG000047736 HOVERGEN:HBG054849 KO:K11649
GeneTree:ENSGT00390000018166 OrthoDB:EOG4JHCF5 CTD:6601
ChiTaRS:SMARCC2 EMBL:BC058720 EMBL:BC062102 IPI:IPI00381019
IPI:IPI00459742 RefSeq:NP_001107568.1 RefSeq:NP_001107569.1
RefSeq:NP_937803.1 UniGene:Mm.417338 ProteinModelPortal:Q6PDG5
SMR:Q6PDG5 DIP:DIP-48884N IntAct:Q6PDG5 STRING:Q6PDG5
PhosphoSite:Q6PDG5 PaxDb:Q6PDG5 PRIDE:Q6PDG5
Ensembl:ENSMUST00000026433 Ensembl:ENSMUST00000105235 GeneID:68094
KEGG:mmu:68094 UCSC:uc007hmw.2 UCSC:uc007hmx.2 InParanoid:Q6PDG5
OMA:QYIQAEP NextBio:326404 Bgee:Q6PDG5 Genevestigator:Q6PDG5
GermOnline:ENSMUSG00000025369 Uniprot:Q6PDG5
Length = 1213
Score = 237 (88.5 bits), Expect = 6.0e-25, Sum P(4) = 6.0e-25
Identities = 43/100 (43%), Positives = 65/100 (65%)
Query: 6 YDPNTKPEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINK 65
++ N + IPS+++WF ++ +H ER AL EFF+G + S+TP+IY YR+FMI+
Sbjct: 413 HEDNVTEQTHHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDT 472
Query: 66 YREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
YR P LT T R++L GDV + +V L++WGLIN+
Sbjct: 473 YRLNPQEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINY 512
Score = 119 (46.9 bits), Expect = 6.0e-25, Sum P(4) = 6.0e-25
Identities = 22/52 (42%), Positives = 39/52 (75%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E + ++ L+ +R
Sbjct: 880 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR 931
Score = 52 (23.4 bits), Expect = 6.0e-25, Sum P(4) = 6.0e-25
Identities = 8/26 (30%), Positives = 18/26 (69%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELP 297
D+W V+++V ++++ +CI + LP
Sbjct: 618 DDWNKVSEHVGSRTQDECILHFLRLP 643
Score = 50 (22.7 bits), Expect = 1.8e-16, Sum P(2) = 1.8e-16
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 146 PNSLKPISVPNSGADG-SGNGKVAVAGETGVKLPPLASYLDV-FGDL 190
P S+ P +VP SG G +GN + + G+ PP A+ + FG L
Sbjct: 1057 PPSMMPGAVPGSGHPGVAGNAPLGLP--FGMPPPPPAAPSVIPFGSL 1101
Score = 44 (20.5 bits), Expect = 6.0e-25, Sum P(4) = 6.0e-25
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 665 PFSQSGNPVMSTVAFLASVVDPRV 688
Score = 42 (19.8 bits), Expect = 9.5e-25, Sum P(4) = 9.5e-25
Identities = 9/57 (15%), Positives = 29/57 (50%)
Query: 326 QSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLIKQVA 382
+ + E ++V +D+ + +S++ + + +P ++ ++G ++K+VA
Sbjct: 783 EEEAKEEISEVPKKDEEKGKEGDSEKESEKSDGDPIVDPEKDKEPTEGQEEVLKEVA 839
Score = 40 (19.1 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 137 PNGVRVVALPNSLKPISVPNSGADGSGNGKVAVAGETGVKLPP 179
P V +A+P + + P SGA G G+ G P
Sbjct: 980 PPTVHGLAVPPAAVASAPPGSGAPPGSLGPSEQIGQAGTTAGP 1022
>FB|FBgn0002783 [details] [associations]
symbol:mor "moira" species:7227 "Drosophila melanogaster"
[GO:0048477 "oogenesis" evidence=NAS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS;IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0035060
"brahma complex" evidence=IDA;NAS;TAS] [GO:0003713 "transcription
coactivator activity" evidence=IC] [GO:0005515 "protein binding"
evidence=IPI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=IGI] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0007480 "imaginal disc-derived leg
morphogenesis" evidence=IGI] [GO:0008587 "imaginal disc-derived
wing margin morphogenesis" evidence=IMP] [GO:0008586 "imaginal
disc-derived wing vein morphogenesis" evidence=IMP] [GO:0007474
"imaginal disc-derived wing vein specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 InterPro:IPR001357 EMBL:AE014297
GO:GO:0045893 GO:GO:0022008 GO:GO:0003677 GO:GO:0008586
GO:GO:0007474 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0007480 SUPFAM:SSF52113 GO:GO:0045749
GO:GO:0043044 GO:GO:0008587 GO:GO:0035060 KO:K11649
GeneTree:ENSGT00390000018166 OMA:QYIQAEP FlyBase:FBgn0002783
EMBL:AF071502 EMBL:BT031130 PIR:T13153 RefSeq:NP_524373.1
UniGene:Dm.2417 SMR:Q9VF03 DIP:DIP-38882N IntAct:Q9VF03
MINT:MINT-6541278 STRING:Q9VF03 EnsemblMetazoa:FBtr0083238
GeneID:41942 KEGG:dme:Dmel_CG18740 UCSC:CG18740-RA CTD:41942
InParanoid:Q9VF03 GenomeRNAi:41942 NextBio:826387 Uniprot:Q9VF03
Length = 1209
Score = 228 (85.3 bits), Expect = 1.3e-24, Sum P(4) = 1.3e-24
Identities = 40/87 (45%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
+PS+S+WF ++ IH E+ A+ EFF+ + S+TP+IY YR+FMI+ YR P+ LT T
Sbjct: 452 VPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTA 511
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGLIN+
Sbjct: 512 CRRNLAGDVCAIMRVHAFLEQWGLINY 538
Score = 121 (47.7 bits), Expect = 1.3e-24, Sum P(4) = 1.3e-24
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
E+R+I+ LVA+++ETQMKKL K+ +F++LE ME+E + ++ L+ ER
Sbjct: 968 EERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLITER 1019
Score = 57 (25.1 bits), Expect = 1.3e-24, Sum P(4) = 1.3e-24
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 270 HGDNWELVAQNVPTKSKLDCISKLIELP 297
H D+W V ++V ++++ +CI + LP
Sbjct: 670 HKDDWNKVCEHVGSRTQDECILHFLRLP 697
Score = 44 (20.5 bits), Expect = 1.3e-24, Sum P(4) = 1.3e-24
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 369 PLSDGGSTLIKQVAHISTMVGPHV 392
P S G+ ++ VA ++++V P V
Sbjct: 719 PFSKSGNPIMSTVAFLASVVDPRV 742
Score = 42 (19.8 bits), Expect = 2.0e-24, Sum P(4) = 2.0e-24
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 310 NSSSCPTGSLNSLKEGQS----------ASSENQNDVKMEDQVHDQMNESKQNGDA 355
+S S P+G +++K +S A+S + D+K ED D E+K +A
Sbjct: 869 SSGSSPSGDKSAIKSDKSNKSSPTETAAAASGGEVDIKTEDSSGD--GETKDGTEA 922
Score = 42 (19.8 bits), Expect = 6.8e-23, Sum P(4) = 6.8e-23
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 124 TELKNQVKIEEGAPNGVRVVALPNSLKPISVPNSGADGSGNGKVAVAGETG 174
T + N +K E A G + PN + NSG G+GN K G+ G
Sbjct: 764 TIMDNHLKNVEKASAGGKFN--PN----FGLANSGIAGTGNDKDDEEGKEG 808
Score = 41 (19.5 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 323 KEGQSASSENQNDVKMED-QVHDQMNESKQN 352
KEG +++S +D +M+D D +SK N
Sbjct: 806 KEGGASASAGGSDEEMKDLSKKDDDAKSKDN 836
Score = 37 (18.1 bits), Expect = 3.6e-22, Sum P(3) = 3.6e-22
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 151 PISVPNSGADGSGNGKVAVAG---ETGVKLPPLAS 182
P++VP G N + A A VK LA+
Sbjct: 932 PLAVPKEGTFSENNMQTAAAAALASAAVKAKHLAA 966
>TAIR|locus:2036942 [details] [associations]
symbol:SWI3C "SWITCH/sucrose nonfermenting 3C"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA]
[GO:0045132 "meiotic chromosome segregation" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 GO:GO:0016514 InterPro:IPR017884 PROSITE:PS51293
HSSP:P32591 eggNOG:COG5259 EMBL:AC007727 KO:K11649 EMBL:AY091026
EMBL:AY117245 IPI:IPI00532467 PIR:D86350 RefSeq:NP_173589.1
UniGene:At.41645 ProteinModelPortal:Q9XI07 SMR:Q9XI07 IntAct:Q9XI07
STRING:Q9XI07 PaxDb:Q9XI07 PRIDE:Q9XI07 EnsemblPlants:AT1G21700.1
GeneID:838774 KEGG:ath:AT1G21700 TAIR:At1g21700
HOGENOM:HOG000243996 InParanoid:Q9XI07 OMA:VAASCAH PhylomeDB:Q9XI07
ProtClustDB:CLSN2679743 Genevestigator:Q9XI07 Uniprot:Q9XI07
Length = 807
Score = 251 (93.4 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 74/287 (25%), Positives = 119/287 (41%)
Query: 16 LYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLT 75
++ +P HS WF + + ER + +FF G S + TP+ Y E+R+ +++KY E P + LT
Sbjct: 175 VHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKTLT 234
Query: 76 FTQVRKSLVG-DVSLLHKVFRLLDEWGLINFGAVXXXXXXXXXXXXXXXTELKNQVKIEE 134
+ + + G D+ +VFR LD WG+IN+ A + +V +
Sbjct: 235 ISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNVPS 294
Query: 135 GAPNGVRVVALPNSLKPISVPNSGADGSGNGKVAVAGETGVKLPPL---ASYLDVFGDLV 191
A + +SL PN G GE LP L + LD+
Sbjct: 295 AALTSI------DSLIKFDKPNCRHKG---------GEVYSSLPSLDGDSPDLDI-RIRE 338
Query: 192 KLKGFKCGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDF-RFSDLGGNSLT 250
L C C + ++ K+G ++C CF +G + S DF R +
Sbjct: 339 HLCDSHCNHCSRPLPTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQ 398
Query: 251 HGXXXXXXXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIELP 297
G +V + +NW +A +V +KSK CI + LP
Sbjct: 399 DGDNWTDQETLLLLEAVELYNENWVQIADHVGSKSKAQCILHFLRLP 445
Score = 104 (41.7 bits), Expect = 3.3e-24, Sum P(2) = 3.3e-24
Identities = 41/196 (20%), Positives = 75/196 (38%)
Query: 352 NGDAATEEPPAKRKRIA-PLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCNESSC 410
NGD I P + ++ VA +++ VGP V L +
Sbjct: 477 NGDLPGYSEQGSDTEIKLPFVKSPNPVMALVAFLASAVGPRVAASCAHESLSVLSEDDRM 536
Query: 411 PREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNLRIR 470
E G E L +G E Q A K + +Q+ + + +P + ++
Sbjct: 537 KSEGMQGKEASLLDG----------ENQQQDGAHK-----TSSQNGAEAQTPLPQD-KVM 580
Query: 471 XXXXXXXXXXXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNE 530
D E+REI+ L A I+ Q+K++ K+ F ++E ++ KE +
Sbjct: 581 AAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLKQFAEIETLLMKECEQ 640
Query: 531 MMQLKECLVEERIDVL 546
+ + ++ ER +L
Sbjct: 641 VEKTRQRFSAERARML 656
>SGD|S000001933 [details] [associations]
symbol:RSC8 "Component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0016586 "RSC
complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP;IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA]
InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF00569 Pfam:PF04433
PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50934 SMART:SM00291
SMART:SM00717 SGD:S000001933 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0000082 GO:GO:0008270 EMBL:D50617 EMBL:BK006940
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0006368 GO:GO:0006337 GO:GO:0016586
GO:GO:0043044 GO:GO:0006303 eggNOG:COG5259 EMBL:AY692841 PIR:S56292
RefSeq:NP_116695.3 RefSeq:NP_116697.3 ProteinModelPortal:P43609
SMR:P43609 DIP:DIP-1478N IntAct:P43609 MINT:MINT-401637
STRING:P43609 PaxDb:P43609 PeptideAtlas:P43609 EnsemblFungi:YFR037C
GeneID:850598 GeneID:850600 KEGG:sce:YFR037C KEGG:sce:YFR039C
CYGD:YFR037c HOGENOM:HOG000246692 KO:K11762 OMA:PYEYLTI
OrthoDB:EOG4PZNGG NextBio:966460 Genevestigator:P43609
GermOnline:YFR037C Uniprot:P43609
Length = 557
Score = 283 (104.7 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 93/369 (25%), Positives = 160/369 (43%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS +SWF IHE E+ + +FF+ SS +TPK YK+ R+F+IN YR P LT T
Sbjct: 82 IPSFASWFDISKIHEIEKRSNPDFFNDSSRFKTPKAYKDTRNFIINTYRLSPYEYLTITA 141
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINFGAVXXXXXXXXXXXXXXXTELKNQVKIEEGAPN 138
VR+++ DV+ + K+ L++WGLIN+ ++ P
Sbjct: 142 VRRNVAMDVASIVKIHAFLEKWGLINY------QIDPRTKPSLIGPSFTGHFQVVLDTPQ 195
Query: 139 GVRVVALPNSLKPISVPNSGADGSGNGKVAVAGETGVKLPPLASYLDVFGDLVKL----- 193
G++ LP ++ I G DG+ + V E V L + D D L
Sbjct: 196 GLKPF-LPENV--IKQEVEGGDGA---EPQVKKEFPVNLTIKKNVYDSAQDFNALQDESR 249
Query: 194 ------KGFKCGSCGEQCNSGCYEYSKQGSFVICEKCFKNGNYGEDKSKDDFRFSDLGGN 247
K + C +CG + + Y + +C +CF+ G++G + DF + GN
Sbjct: 250 NSRQIHKVYICHTCGNESINVRYHNLRARDTNLCSRCFQEGHFGANFQSSDFIRLENNGN 309
Query: 248 SLTHGXXXXXXXXXXXXXSVMRHGDNWELVAQNVPTKSKL-DCISKLIELPFGEF----M 302
S+ + + D WE +A +V ++ DCI K + LP + +
Sbjct: 310 SVKKNWSDQEMLLLLE--GIEMYEDQWEKIADHVGGHKRVEDCIEKFLSLPIEDNYIREV 367
Query: 303 MGSAHEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPA 362
+GS GS++ K + + Q ++ +D++ ++S++ + EE A
Sbjct: 368 VGSTLNGKGGDSRDGSVSGSKLMECVNDAVQTLLQGDDKLGKVSDKSREISEKYIEESQA 427
Query: 363 KRKRIAPLS 371
+ + L+
Sbjct: 428 IIQELVKLT 436
Score = 61 (26.5 bits), Expect = 3.6e-24, Sum P(2) = 3.6e-24
Identities = 14/57 (24%), Positives = 32/57 (56%)
Query: 494 EIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEERIDVLERAL 550
E + ++ +++ M+KL SK DLE +E E + ++ E ++ +R+ + ++ L
Sbjct: 424 ESQAIIQELVKLTMEKLESKFTKLCDLETQLEMEKLKYVKESEKMLNDRLSLSKQIL 480
>CGD|CAL0002007 [details] [associations]
symbol:orf19.4488 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0044109 "cellular alcohol
catabolic process" evidence=IEA] [GO:0031496 "positive regulation
of mating type switching" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0005987 "sucrose catabolic
process" evidence=IEA] [GO:0000436 "carbon catabolite activation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
CGD:CAL0002007 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 EMBL:AACQ01000141 KO:K11772
RefSeq:XP_712915.1 ProteinModelPortal:Q59TH7 SMR:Q59TH7
STRING:Q59TH7 GeneID:3645438 KEGG:cal:CaO19.4488 Uniprot:Q59TH7
Length = 971
Score = 265 (98.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 50/105 (47%), Positives = 70/105 (66%)
Query: 4 PQYDPNTKPEFE---LYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRD 60
P+ P KP+++ L IPS++SWF IH+ E+ +L EFFD S++PK+Y YR+
Sbjct: 404 PEEPPKEKPQYKQTHLIVIPSYASWFNMKKIHKIEKESLPEFFDSIHPSKSPKLYVNYRN 463
Query: 61 FMINKYREEPSRRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
FMIN YR P+ LT T R++LVGDV L +V R L++WGLIN+
Sbjct: 464 FMINSYRLNPNEFLTLTSCRRNLVGDVGTLMRVHRFLNKWGLINY 508
Score = 83 (34.3 bits), Expect = 2.4e-23, Sum P(2) = 2.4e-23
Identities = 19/66 (28%), Positives = 40/66 (60%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEERIDVLERAL 550
E+RE+ + + I+ ++ K+ +K++ ++LE I E+E M++ +E L +RI + + +
Sbjct: 791 EEREMHKIGSSIVNHEISKIETKLDKVEELEKIYERERQNMLKQQEELFIDRISLTKSTI 850
Query: 551 KTGVSK 556
GV K
Sbjct: 851 --GVIK 854
Score = 42 (19.8 bits), Expect = 4.5e-19, Sum P(2) = 4.5e-19
Identities = 15/60 (25%), Positives = 27/60 (45%)
Query: 315 PTG-SLNSLKEGQSASSENQNDVKMEDQVHDQMNE--SKQNGDAATEEPPAKRKRIAPLS 371
PT +L +K G + ++ N+ D V+D ++ S G + T + + PLS
Sbjct: 900 PTRRALEQIKNGDNTNNTASNNSTTGDDVNDGGSKINSTTTGGSTTIDVELQDDSFKPLS 959
Score = 39 (18.8 bits), Expect = 9.1e-19, Sum P(2) = 9.1e-19
Identities = 25/110 (22%), Positives = 38/110 (34%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGE--FMMGSAHEMNSSSCPTGSLNSLKEGQSAS 329
D L + KL+ KLIE GS + S+ G LN K
Sbjct: 841 DRISLTKSTIGVIKKLEEAIKLIESNNNNNNTATGSGGGVRDSTNINGLLNEAKSLLYKP 900
Query: 330 SENQ-NDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLI 378
+ +K D ++ + + GD + +I + GGST I
Sbjct: 901 TRRALEQIKNGDNTNNTASNNSTTGDDVNDGG----SKINSTTTGGSTTI 946
>SGD|S000003712 [details] [associations]
symbol:SWI3 "Subunit of the SWI/SNF chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0003682
"chromatin binding" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA;IMP;IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000436 "carbon
catabolite activation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0031496
"positive regulation of mating type switching" evidence=IMP]
[GO:0042393 "histone binding" evidence=IPI] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 SGD:S000003712 EMBL:BK006943
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0016514
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0005987 GO:GO:0043044
GO:GO:0000436 EMBL:X56792 eggNOG:COG5259 OrthoDB:EOG4PZNGG
GeneTree:ENSGT00390000018166 GO:GO:0044109 GO:GO:0031496
EMBL:M84390 EMBL:Z49451 PIR:S26706 RefSeq:NP_012359.1 PDB:2FQ3
PDBsum:2FQ3 ProteinModelPortal:P32591 SMR:P32591 DIP:DIP-2471N
IntAct:P32591 MINT:MINT-563159 STRING:P32591 PaxDb:P32591
PeptideAtlas:P32591 EnsemblFungi:YJL176C GeneID:853264
KEGG:sce:YJL176C CYGD:YJL176c HOGENOM:HOG000142068 KO:K11772
OMA:ERISENC EvolutionaryTrace:P32591 NextBio:973526
Genevestigator:P32591 GermOnline:YJL176C Uniprot:P32591
Length = 825
Score = 210 (79.0 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 37/94 (39%), Positives = 57/94 (60%)
Query: 12 PEFELYTIPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPS 71
P+ IPS+S WF + IH E +L EFF S+TP++Y YR+FM+N YR P+
Sbjct: 300 PQAHEIVIPSYSKWFNLEKIHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPN 359
Query: 72 RRLTFTQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
+ T R+++ GD + L ++ + L +WGLIN+
Sbjct: 360 EYFSVTTARRNVSGDAAALFRLHKFLTKWGLINY 393
Score = 99 (39.9 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 33/128 (25%), Positives = 61/128 (47%)
Query: 425 GLSSP-TMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNLRIRXXXXXXXXXXXXX 483
GL +P T+ S +RA+Q E +S+ ++ S +K P+ I+
Sbjct: 616 GLVNPKTVQSMTQRAIQ----SAESIKSQKEEISDQK---PIE-HIKEGSEIAISSLGYR 667
Query: 484 XXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEERI 543
E+R++ L +I QM+KL +K+N+ LE ME E + + +E L+ +R+
Sbjct: 668 SHIFATNEERQMNFLTNELIRLQMEKLDAKLNHLKKLEKFMELERKTLERQQENLLIQRL 727
Query: 544 DVLERALK 551
+ + + K
Sbjct: 728 NFNQNSSK 735
Score = 75 (31.5 bits), Expect = 1.8e-22, Sum P(3) = 1.8e-22
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 267 VMRHGDNWELVAQNVPTKSKLDCISKLIELPFGE-FMMGSAHEMNSSSCPTGSLNSLKEG 325
+ G +W VA+NV KS CI + ++LP + F+ G + + G L
Sbjct: 539 IQEFGADWYKVAKNVGNKSPEQCILRFLQLPIEDKFLYGDGNGKGDNDNGLGPLKYAPHL 598
Query: 326 QSASSEN 332
+ SEN
Sbjct: 599 PFSKSEN 605
Score = 58 (25.5 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 28/118 (23%), Positives = 45/118 (38%)
Query: 274 WELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTGSLN-SLKEGQSASSEN 332
W L+ N SKL + K IE P + H+ P S S++ A +
Sbjct: 388 WGLI--NYQVDSKL--LPKNIEPPLTS-QYSTRHDAPRGLFPFESYKPSVQLPDMAKLKK 442
Query: 333 Q-NDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIAPLSDGGSTLIKQVAHISTMVG 389
N E ++ + ESK+ D T P +D G + +V+ ++M G
Sbjct: 443 MMNTSDSESTLYKYLKESKRKYDEITHPPSTTDDENGDKNDNGGKMNNEVSTSTSMTG 500
Score = 54 (24.1 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 307 HEMNSSSCPTGSLNSLKEGQSASSENQNDVKMEDQVHDQMNESKQN 352
+E+++S+ TG N L+EG++ S VK+ +Q+ + N SK++
Sbjct: 490 NEVSTSTSMTGDANLLEEGET--SRPLKKVKILEQIDE--NWSKED 531
Score = 43 (20.2 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 128 NQVKIEEGAPNGVRVVALPNSLKPISV 154
N+ IE G + + ++ N +KPIS+
Sbjct: 788 NKPNIETGENHNGQSISNENDVKPISI 814
>UNIPROTKB|G4MV88 [details] [associations]
symbol:MGG_01720 "Transcription regulatory protein SWI3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001005
InterPro:IPR007526 InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433
PROSITE:PS50934 SMART:SM00717 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:CM001232 KO:K11649 RefSeq:XP_003714717.1
ProteinModelPortal:G4MV88 EnsemblFungi:MGG_01720T0 GeneID:2679776
KEGG:mgr:MGG_01720 Uniprot:G4MV88
Length = 704
Score = 229 (85.7 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 41/87 (47%), Positives = 60/87 (68%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
+PS++ WF + I+ E+ AL EFF+ + S+TP +YK+YRDFMIN YR P+ LT T
Sbjct: 139 LPSYTVWFDMNAINNIEKKALPEFFNSRNRSKTPAVYKDYRDFMINTYRLNPAEYLTVTA 198
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGLIN+
Sbjct: 199 CRRNLAGDVCAIMRVHAFLEQWGLINY 225
Score = 91 (37.1 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 33/184 (17%), Positives = 71/184 (38%)
Query: 360 PPAKRKRIAPLSDGGSTLIKQVAHISTMVGPHVTXXXXXXXXXXLCNESSCPREIFDGDE 419
P ++ P S + ++ VA ++T+ P L E+ D +
Sbjct: 472 PTIGNDKLLPFSHADNPILSVVAFLATLADPTSVASAAGRSYEDLTKALRKQLELGDSSQ 531
Query: 420 DYLANGLSSPTMVSDPERALQVDASKMEENQSETQDASSEKNDVPLNLRIRXXXXXXXXX 479
NG D + ++ VD + E + T ++ K I+
Sbjct: 532 ---TNGKGKE---KDGD-SMDVDIQQ-ETTTTTTTTTTTTKTS------IQGLAGIPLAA 577
Query: 480 XXXXXXXXXDQEDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLV 539
E+RE+ LV+ + ++K+ K+ +F+D+E +++ E E+ + ++ L
Sbjct: 578 TASRAGGLASHEEREMTRLVSAAVNVTLQKVDMKLKFFNDMESVLQAERRELERARQQLY 637
Query: 540 EERI 543
+R+
Sbjct: 638 LDRL 641
Score = 57 (25.1 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 21/130 (16%), Positives = 54/130 (41%)
Query: 198 CGSCGEQCNSGCYE--YSKQGSFV----ICEKCFKNGNYGEDKSKDDFRFSDLGGN---- 247
C +CG+ C Y ++ G+ V +C C+ + D +D+ + +
Sbjct: 345 CFTCGKDCTREYYHKVQTEGGANVPKKELCPGCYASSRM--DAKEDNMGYEKMENPQYPA 402
Query: 248 SLTHGXXXXXXXXXXXXXSVMRHGDNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAH 307
++ ++ ++ ++W +A +V T+++ +C ++L + + +
Sbjct: 403 TVDREAPWTDEETVRLLEALQKYDEDWGEIANHVGTRTREECALHFLQLDIEDKYLDT-- 460
Query: 308 EMNSSSCPTG 317
E ++ PTG
Sbjct: 461 EPLQANVPTG 470
>UNIPROTKB|F1SLI6 [details] [associations]
symbol:LOC100626030 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 EMBL:CU633694 EMBL:CU929897
Ensembl:ENSSSCT00000012417 Uniprot:F1SLI6
Length = 1024
Score = 233 (87.1 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 453 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 512
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 513 CRRNLTGDVCAVMRVHAFLEQWGLVNY 539
Score = 59 (25.8 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 12/50 (24%), Positives = 30/50 (60%)
Query: 493 REIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEMMQLKECLVEER 542
++ E ++ + I+T+ +K K YF ++ I +++ ++ Q ++ L+ ER
Sbjct: 898 KKCETIIRLSIQTKRQKTKKKKKYFINVPTIRKRQSLQLEQQRQQLLTER 947
>UNIPROTKB|I3LJ29 [details] [associations]
symbol:SMARCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000953 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00298
InterPro:IPR001357 GO:GO:0005634 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 SUPFAM:SSF46689 SUPFAM:SSF52113
GeneTree:ENSGT00390000018166 Ensembl:ENSSSCT00000029308 OMA:EWNISEN
Uniprot:I3LJ29
Length = 532
Score = 233 (87.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 43/87 (49%), Positives = 61/87 (70%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFFDGSSISRTPKIYKEYRDFMINKYREEPSRRLTFTQ 78
IPS++SWF ++ IH ER AL EFF+G + S+TP+IY YR+FMI+ YR P LT T
Sbjct: 342 IPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTA 401
Query: 79 VRKSLVGDVSLLHKVFRLLDEWGLINF 105
R++L GDV + +V L++WGL+N+
Sbjct: 402 CRRNLTGDVCAVMRVHAFLEQWGLVNY 428
>CGD|CAL0003837 [details] [associations]
symbol:orf19.7234 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0015616 "DNA
translocase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF00249 Pfam:PF04433 PROSITE:PS50934
SMART:SM00717 CGD:CAL0003837 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AACQ01000092 eggNOG:COG5259 KO:K11762
RefSeq:XP_715034.1 ProteinModelPortal:Q59ZV7 STRING:Q59ZV7
GeneID:3643306 KEGG:cal:CaO19.7234 Uniprot:Q59ZV7
Length = 561
Score = 190 (71.9 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 36/89 (40%), Positives = 58/89 (65%)
Query: 19 IPSHSSWFRWDDIHETERTALKEFF--DGSSISRTPKIYKEYRDFMINKYREEPSRRLTF 76
+PS + WF IH+ E+ +L +FF DGS ++ + YK RDF++N +R P LT
Sbjct: 65 VPSFAKWFDLSKIHDIEKKSLPDFFVEDGSGY-KSSQDYKYIRDFIVNTFRLNPKEYLTI 123
Query: 77 TQVRKSLVGDVSLLHKVFRLLDEWGLINF 105
T VR++L GDV+ + ++ + L++WGLIN+
Sbjct: 124 TAVRRNLSGDVTNIIRIHQFLEQWGLINY 152
Score = 66 (28.3 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGE-FMMGSAHEMN 310
+ W+ ++++V TK++ CI K I+LP + F+ E N
Sbjct: 348 NQWDKISEHVATKTREQCIIKFIQLPIEDKFLTKLIKEEN 387
Score = 56 (24.8 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 494 EIEHLVAIIIETQMKKLHSKINYFDDLELIMEKEYNEM-MQLKECLVE 540
E +LV +IE ++K + K+ D+L+ + K N++ ++ K+ L+E
Sbjct: 432 EQTNLVNQVIELTLEKFNLKLKKIDELQANLLKYENQLNLERKQILLE 479
Score = 47 (21.6 bits), Expect = 1.0e-13, Sum P(3) = 1.0e-13
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 437 RALQVDASKMEENQSETQDASSEKNDVPLNLRIR 470
+A + +K ++ +E + E N++PLNL IR
Sbjct: 193 KATPSNVTKTDDLNNENIPTAKE-NELPLNLEIR 225
Score = 40 (19.1 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 319 LNSLKEGQSASSENQN-DVKMEDQVHDQMNESKQNGD---AATEEPPA 362
+N + + S++ +N D KM+ V + NE+ N + +EP A
Sbjct: 510 INEIHKSVKQSNQTENGDDKMD--VDESSNENDDNTSKLPVSVKEPKA 555
>DICTYBASE|DDB_G0288285 [details] [associations]
symbol:mybX "myb domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001005 InterPro:IPR007526
InterPro:IPR009057 Pfam:PF04433 PROSITE:PS50934 SMART:SM00717
dictyBase:DDB_G0288285 GO:GO:0005634 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GenomeReviews:CM000154_GR SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 EMBL:AAFI02000109 RefSeq:XP_636792.1 HSSP:P32591
ProteinModelPortal:Q54J55 PRIDE:Q54J55 EnsemblProtists:DDB0220513
GeneID:8626549 KEGG:ddi:DDB_G0288285 eggNOG:COG5259 OMA:WDLINCF
Uniprot:Q54J55
Length = 1620
Score = 89 (36.4 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 53 KIYKEYRDFMINKYREEPSRRLTFTQVRKSLVG--------DVSLLHKVFRLLDEWGLIN 104
++YK YRD+MI Y++ P + L+ T V+ + ++ + K+F L+ W LIN
Sbjct: 352 ELYKIYRDYMITSYQKNPYQYLSVTDVKNHFINQNKKTFKVNIRSIIKIFDFLEYWDLIN 411
Score = 81 (33.6 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 38/152 (25%), Positives = 58/152 (38%)
Query: 190 LVKLKG--FKCGSCGEQCNSGCYEYSKQGS-------------FVICEKCFKNGNYGEDK 234
L+K K F+C C C++ Y+ + +IC CF +GNY
Sbjct: 853 LIKKKKPLFECKKCKADCSNVRYQLVNNSTALDGNILPEYFYPMIICVNCFSSGNYENFI 912
Query: 235 SKDDFRFSDLGGNSLTHGXXXXXXXXXXXXXSVMRHGDNWELVAQNVP-TKSKLDCISKL 293
F+ + G + R DNW+ ++ + +K+ C++
Sbjct: 913 QSSSFQRIEQHQPE-EFGWTDIETLLLLEGIEIFR--DNWQEISDYIGGSKTPEQCLTHF 969
Query: 294 IELPF-GEFMMGSAHEMNSSSCPTGSLNSLKE 324
I LP EF+ E SS P GSL S KE
Sbjct: 970 IRLPIEDEFL-----ERKISSFPVGSL-SKKE 995
Score = 57 (25.1 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 322 LKEGQSASSENQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKR 366
LKE + E + D + +D+V + E KQ D EE K+++
Sbjct: 1098 LKERED--KEKEEDKEAKDKVDKEKEEDKQKQDKEKEEDKEKQEK 1140
Score = 54 (24.1 bits), Expect = 2.8e-06, Sum P(6) = 2.8e-06
Identities = 12/43 (27%), Positives = 27/43 (62%)
Query: 319 LNSLKEGQSASSENQNDVKM--EDQVHDQMNESKQNGDAATEE 359
LN+L E QS++ +++++ +M ++Q + +ES N ++E
Sbjct: 1302 LNNLSESQSSNDQSKSNEQMSSDNQESKENSESNSNTQITSKE 1344
Score = 52 (23.4 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKE 527
E++EI L+ I+ Q++KL ++ E +EKE
Sbjct: 1571 EEQEIRDLIRSIVICQIRKLELLWKFYVTYEQSLEKE 1607
Score = 50 (22.7 bits), Expect = 1.0e-05, Sum P(5) = 1.0e-05
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 320 NSLKEGQSASSENQNDVKMEDQVHDQMNESKQNG-DAATEE 359
N++ + + E ++E++ +D +E K+NG D EE
Sbjct: 1456 NNVDKNEKDKDEENEMEEVEEEENDLNDEKKENGVDGVGEE 1496
Score = 47 (21.6 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 24 SWFR-WDDIHETERTALKEFF 43
+WF D+IH+ E L EFF
Sbjct: 275 NWFTSLDNIHQVEINNLPEFF 295
Score = 41 (19.5 bits), Expect = 7.2e-05, Sum P(5) = 7.2e-05
Identities = 7/26 (26%), Positives = 15/26 (57%)
Query: 436 ERALQVDASKMEENQSETQDASSEKN 461
++ + D K E+++ E +D E+N
Sbjct: 1128 DKEKEEDKEKQEKDKEEDKDKEKEEN 1153
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 442 DASKMEENQSETQDASSEKND 462
+ ++MEE + E D + EK +
Sbjct: 1467 EENEMEEVEEEENDLNDEKKE 1487
Score = 39 (18.8 bits), Expect = 1.5e-06, Sum P(6) = 1.5e-06
Identities = 17/63 (26%), Positives = 30/63 (47%)
Query: 406 NESSCPREIFDGDE-DYLANGLSSPTMVSDPERA---LQVDASKMEENQ---SETQDASS 458
NE+ ++I + +E + N LS +D ++ + D + +EN S TQ S
Sbjct: 1284 NENKNEKQIENENEKEKDLNNLSESQSSNDQSKSNEQMSSDNQESKENSESNSNTQITSK 1343
Query: 459 EKN 461
E+N
Sbjct: 1344 EQN 1346
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(5) = 0.00011
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 434 DPERALQVDASKMEENQSETQDASSEK 460
D E +VD K E+ Q + ++ +K
Sbjct: 1109 DKEAKDKVDKEKEEDKQKQDKEKEEDK 1135
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(6) = 1.8e-06
Identities = 7/30 (23%), Positives = 17/30 (56%)
Query: 432 VSDPERALQVDASKMEENQSETQDASSEKN 461
+ D +++ + + +E + E QD+S+ N
Sbjct: 1188 IGDHDKSDSTNTTTTKEMEIEKQDSSTSTN 1217
Score = 37 (18.1 bits), Expect = 2.3e-06, Sum P(6) = 2.3e-06
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 416 DGDEDYLANGLSSPTMVSDPERALQ---VDAS-KMEENQSETQDASSEKNDV 463
D D++ N S+ M D + VD + K ++ ++E ++ E+ND+
Sbjct: 1430 DNDDNNNNNNNSNDKMDVDNKNNNNNNNVDKNEKDKDEENEMEEVEEEENDL 1481
Score = 37 (18.1 bits), Expect = 0.00017, Sum P(5) = 0.00017
Identities = 7/32 (21%), Positives = 17/32 (53%)
Query: 320 NSLKEGQSASSENQNDVKMEDQVHDQMNESKQ 351
N + + ++ N N+V ++ D+ NE ++
Sbjct: 1442 NDKMDVDNKNNNNNNNVDKNEKDKDEENEMEE 1473
>UNIPROTKB|I3LNI6 [details] [associations]
symbol:LOC100737447 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071564 "npBAF complex"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016514 "SWI/SNF
complex" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008286 "insulin receptor signaling pathway"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006337 "nucleosome disassembly" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001741 "XY body"
evidence=IEA] InterPro:IPR017884 PROSITE:PS51293
GeneTree:ENSGT00390000018166 EMBL:CU929897
Ensembl:ENSSSCT00000023426 Uniprot:I3LNI6
Length = 301
Score = 113 (44.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 20/37 (54%), Positives = 32/37 (86%)
Query: 491 EDREIEHLVAIIIETQMKKLHSKINYFDDLELIMEKE 527
E+R+I+ LVA+++ETQMKKL K+ +F++LE IM++E
Sbjct: 252 EERKIKSLVALLVETQMKKLEIKLRHFEELETIMDRE 288
Score = 55 (24.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 39/191 (20%), Positives = 75/191 (39%)
Query: 272 DNWELVAQNVPTKSKLDCISKLIELPFGEFMMGSAHEMNSSSCPTGSLNSLKEGQSASSE 331
D+W V+++V ++++ +CI + LP + + E + +S + + QS +
Sbjct: 4 DDWNKVSEHVGSRTQDECILHFLRLPIEDPYL----ENSDASLGPLAYQPVPFSQSGNPV 59
Query: 332 NQNDVKMEDQVHDQMNESKQNGDAATEEPPAKRKRIA-PLSDGGSTLIKQVAHISTMVGP 390
+ V V D S AA EE R+ + L + +++ A S V P
Sbjct: 60 -MSTVAFLASVVDPRVASAA-AKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDP 117
Query: 391 HVTXXXXXXXXXXLCNESSCPREIFDGDEDYLANGLSSPTMVSDPERALQVDASKMEENQ 450
T + P ++ +E+ + S PE+A ++ +E
Sbjct: 118 --TYGLESSCIAGTGPDE--PEKLEGAEEEKMETDADS----QQPEKAENKGENETDEGD 169
Query: 451 SETQDASSEKN 461
+ QD +EKN
Sbjct: 170 -KAQDGENEKN 179
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 559 503 0.00085 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 620 (66 KB)
Total size of DFA: 313 KB (2160 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 48.89u 0.14s 49.03t Elapsed: 00:00:02
Total cpu time: 48.89u 0.14s 49.03t Elapsed: 00:00:02
Start: Fri May 10 06:44:13 2013 End: Fri May 10 06:44:15 2013