Query         008613
Match_columns 559
No_of_seqs    390 out of 2655
Neff          7.0 
Searched_HMMs 13730
Date          Mon Mar 25 07:38:39 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008613.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/008613hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d2fbna1 a.118.8.1 (A:22-174) P  99.8 1.7E-19 1.2E-23  164.1  19.9  133   67-199    13-152 (153)
  2 d1p5qa1 a.118.8.1 (A:258-427)   99.8 8.6E-19 6.3E-23  162.1  20.3  133   67-199     9-147 (170)
  3 d1kt1a1 a.118.8.1 (A:254-421)   99.8 1.4E-18   1E-22  160.1  20.2  133   67-199    11-149 (168)
  4 d1elwa_ a.118.8.1 (A:) Hop {Hu  99.8 5.5E-19   4E-23  153.4  15.8  115   70-193     2-116 (117)
  5 d1a17a_ a.118.8.1 (A:) Protein  99.8 5.2E-18 3.8E-22  154.3  18.1  122   67-197     6-127 (159)
  6 d1ihga1 a.118.8.1 (A:197-365)   99.7 1.6E-17 1.1E-21  152.7  16.8  133   67-199    23-162 (169)
  7 d2c2la1 a.118.8.1 (A:24-224) S  99.7   9E-18 6.6E-22  156.0  11.8  102   71-181     4-105 (201)
  8 d1elra_ a.118.8.1 (A:) Hop {Hu  99.7 4.3E-16 3.1E-20  136.9  15.4  117   70-196     3-126 (128)
  9 d1xnfa_ a.118.8.1 (A:) Lipopro  99.6 8.6E-15 6.3E-19  140.5  16.9  118   68-194    34-151 (259)
 10 d1nzna_ a.118.8.1 (A:) Mitocho  99.5 8.6E-15 6.3E-19  128.0  10.4  113   76-197     4-121 (122)
 11 d1w3ba_ a.118.8.1 (A:) O-GlcNA  99.5 7.8E-14 5.7E-18  138.4  17.8  132   56-196   256-387 (388)
 12 d1fcha_ a.118.8.1 (A:) Peroxin  99.5 1.7E-13 1.3E-17  135.5  18.8  206    4-209    19-267 (323)
 13 d2hr2a1 a.118.8.8 (A:2-157) Hy  99.5 2.3E-14 1.7E-18  129.6  10.8  112   70-181     8-133 (156)
 14 d1hh8a_ a.118.8.1 (A:) Neutrop  99.5   6E-14 4.3E-18  131.6  13.2  119   70-200     4-138 (192)
 15 d2h6fa1 a.118.6.1 (A:55-369) P  99.5 9.8E-14 7.1E-18  139.9  14.5  139   32-197    56-195 (315)
 16 d2h6fa1 a.118.6.1 (A:55-369) P  99.5   5E-14 3.6E-18  142.0  11.9  135   66-209    38-173 (315)
 17 d1hxia_ a.118.8.1 (A:) Peroxin  99.5 1.2E-13 8.5E-18  118.2  11.8   94   73-175    18-111 (112)
 18 d1w3ba_ a.118.8.1 (A:) O-GlcNA  99.5 3.4E-13 2.5E-17  133.6  15.4  143   58-209   224-366 (388)
 19 d1fcha_ a.118.8.1 (A:) Peroxin  99.4 2.7E-13 1.9E-17  134.2  14.2  202   21-282    21-273 (323)
 20 d1hh8a_ a.118.8.1 (A:) Neutrop  99.4 7.3E-13 5.3E-17  124.1  16.0  102   71-181    36-153 (192)
 21 d1zu2a1 a.118.8.1 (A:1-145) Mi  99.4 2.9E-13 2.1E-17  121.4  10.3  110   80-198     6-136 (145)
 22 d1xnfa_ a.118.8.1 (A:) Lipopro  99.3 3.4E-12 2.4E-16  122.0  11.6  120   85-209    13-132 (259)
 23 d1tjca_ a.118.8.1 (A:) Prolyl   99.3 1.1E-11 8.3E-16  102.6  11.4   89   71-161     5-93  (95)
 24 d1a17a_ a.118.8.1 (A:) Protein  99.2   2E-10 1.5E-14  103.1  17.1  115   28-169    19-135 (159)
 25 d2ff4a2 a.118.8.3 (A:105-283)   99.2 2.1E-10 1.5E-14  106.2  17.6  114   67-180     7-140 (179)
 26 d1elwa_ a.118.8.1 (A:) Hop {Hu  99.2 9.8E-11 7.1E-15  100.3  13.9  106   27-159    11-116 (117)
 27 d2c2la1 a.118.8.1 (A:24-224) S  99.2 1.9E-11 1.3E-15  112.4   9.0   94  116-209     6-99  (201)
 28 d1hxia_ a.118.8.1 (A:) Peroxin  99.2 3.8E-11 2.7E-15  102.2  10.0   87  116-202    18-104 (112)
 29 d1ya0a1 a.118.8.1 (A:1-497) SM  99.1 4.3E-11 3.1E-15  127.7  10.9  122   66-198   115-236 (497)
 30 d1tjca_ a.118.8.1 (A:) Prolyl   99.1 1.2E-10   9E-15   96.2  11.3   82  115-196     6-94  (95)
 31 d1ihga1 a.118.8.1 (A:197-365)   99.1 1.1E-09 7.9E-14   99.3  16.7   94   66-168    72-165 (169)
 32 d1elra_ a.118.8.1 (A:) Hop {Hu  99.1 8.5E-11 6.2E-15  102.3   8.4   96  114-209     4-99  (128)
 33 d1kt1a1 a.118.8.1 (A:254-421)   99.1 9.5E-10 6.9E-14   99.9  15.5   96   70-174    63-159 (168)
 34 d1p5qa1 a.118.8.1 (A:258-427)   99.0 1.6E-09 1.1E-13   98.7  15.0   89   71-168    62-150 (170)
 35 d1dcea1 a.118.6.1 (A:1-241,A:3  99.0 1.5E-09 1.1E-13  108.2  15.3  159   35-210    45-206 (334)
 36 d2fbna1 a.118.8.1 (A:22-174) P  99.0 2.3E-09 1.7E-13   95.9  13.6   84   71-163    67-150 (153)
 37 d1nzna_ a.118.8.1 (A:) Mitocho  98.9 7.7E-10 5.6E-14   95.9   7.7  104   51-161    13-119 (122)
 38 d1zu2a1 a.118.8.1 (A:1-145) Mi  98.9 8.8E-10 6.4E-14   98.1   8.3  104   56-168    16-140 (145)
 39 d1qqea_ a.118.8.1 (A:) Vesicul  98.9 1.7E-09 1.2E-13  106.4  11.1  104   71-177    37-147 (290)
 40 d1qqea_ a.118.8.1 (A:) Vesicul  98.9 1.9E-08 1.4E-12   98.5  18.8  113   67-182    73-192 (290)
 41 d1dcea1 a.118.6.1 (A:1-241,A:3  98.7   2E-08 1.4E-12   99.8   9.7  128   55-191   127-319 (334)
 42 d1hz4a_ a.118.8.2 (A:) Transcr  98.5 1.4E-06   1E-10   83.5  17.7  141   25-181    18-166 (366)
 43 d1ya0a1 a.118.8.1 (A:1-497) SM  98.5 1.8E-08 1.3E-12  106.9   4.2  122   77-209    92-213 (497)
 44 d2hr2a1 a.118.8.8 (A:2-157) Hy  98.5 4.7E-07 3.5E-11   80.4  12.9  114   28-147    18-133 (156)
 45 d1hz4a_ a.118.8.2 (A:) Transcr  98.5   7E-07 5.1E-11   85.7  14.3  104   71-178    12-121 (366)
 46 d1zbpa1 e.61.1.1 (A:2-265) Hyp  98.4 2.7E-08 1.9E-12   97.4   1.8   91   78-177     3-93  (264)
 47 d1zbpa1 e.61.1.1 (A:2-265) Hyp  98.4 1.6E-07 1.2E-11   91.6   6.7  131   27-184     4-135 (264)
 48 d2pqrb1 a.118.8.1 (B:5-128) Mi  98.4 2.1E-06 1.6E-10   73.7  12.5   84  114-197    35-122 (124)
 49 d2pqrb1 a.118.8.1 (B:5-128) Mi  98.3 4.3E-06 3.1E-10   71.8  13.0  101   50-159    15-118 (124)
 50 d2ff4a2 a.118.8.3 (A:105-283)   98.3 1.3E-06 9.6E-11   79.9   9.9  100  113-212    10-131 (179)
 51 d2onda1 a.118.8.7 (A:242-549)   98.2 5.5E-06   4E-10   81.1  12.9  125   69-201    97-222 (308)
 52 d2onda1 a.118.8.7 (A:242-549)   98.1 1.6E-05 1.2E-09   77.6  14.1  116   72-196   135-255 (308)
 53 d1ouva_ a.118.18.1 (A:) Cystei  97.7 0.00021 1.5E-08   67.2  13.8  106   71-191     2-115 (265)
 54 d1klxa_ a.118.18.1 (A:) Cystei  97.3  0.0012 8.7E-08   56.0  11.8   83   83-178    35-125 (133)
 55 d1ouva_ a.118.18.1 (A:) Cystei  97.2 0.00089 6.5E-08   62.7  11.8  104   71-189   142-257 (265)
 56 d1klxa_ a.118.18.1 (A:) Cystei  97.0  0.0034 2.5E-07   53.0  12.0   93   85-194     7-103 (133)
 57 d1qsaa1 a.118.5.1 (A:1-450) 70  80.8     3.5 0.00026   40.6  10.7   91   76-176   257-347 (450)
 58 d1wfda_ a.7.14.1 (A:) Hypothet  78.7     1.3 9.6E-05   34.5   5.2   32   69-100    13-44  (93)
 59 d2crba1 a.7.16.1 (A:8-90) Nucl  77.2     1.9 0.00014   32.7   5.4   31   70-100     7-37  (83)
 60 d1b89a_ a.118.1.3 (A:) Clathri  75.2     3.5 0.00026   39.6   8.3  100   76-192    19-143 (336)
 61 d2crba1 a.7.16.1 (A:8-90) Nucl  73.5     2.2 0.00016   32.4   4.8   39  149-188     9-54  (83)
 62 d1wfda_ a.7.14.1 (A:) Hypothet  65.8      14   0.001   28.2   8.5   24  118-141    19-42  (93)
 63 d1wr0a1 a.7.14.1 (A:5-81) Vacu  62.9     2.7  0.0002   31.4   3.4   33   68-100     8-40  (77)
 64 d3ckca1 a.118.8.6 (A:42-551) S  61.4      13 0.00095   36.8   9.6   88   89-176    87-214 (510)
 65 d2ijqa1 a.246.2.1 (A:14-158) H  58.8      29  0.0021   28.8   9.8   73   70-143    16-89  (145)
 66 d1wy6a1 a.118.20.1 (A:7-167) H  53.5      31  0.0022   28.4   8.7   62  116-177    87-149 (161)
 67 d1qsaa1 a.118.5.1 (A:1-450) 70  49.9      78  0.0057   30.1  13.2  121    7-144     9-132 (450)
 68 d2cfua2 d.157.1.13 (A:20-524)   45.0      19  0.0014   36.1   7.5   54  148-201   430-483 (505)
 69 d2cfua2 d.157.1.13 (A:20-524)   43.8      16  0.0012   36.7   6.7   52  115-166   431-482 (505)
 70 d1om2a_ a.23.4.1 (A:) Mitochon  39.5      14 0.00099   28.7   4.0   29   75-103    24-52  (95)
 71 d1wr0a1 a.7.14.1 (A:5-81) Vacu  38.8      25  0.0018   25.7   5.4   15  126-140    23-37  (77)
 72 d1om2a_ a.23.4.1 (A:) Mitochon  38.1      18  0.0013   28.0   4.5   35  154-188    26-60  (95)
 73 d1fs1b1 a.157.1.1 (B:86-140) C  33.5      12 0.00084   26.0   2.4   19  358-376    36-54  (55)
 74 d2cwya1 a.246.2.1 (A:1-94) Hyp  30.6      32  0.0023   26.3   4.9   28   75-102     5-32  (94)
 75 d1rw6a_ a.47.4.1 (A:) CAPPD, a  29.8      76  0.0055   27.3   7.9   85   87-180    96-180 (192)
 76 d1rw6a_ a.47.4.1 (A:) CAPPD, a  28.7 1.7E+02   0.012   25.0  10.3   85  115-200    82-173 (192)
 77 d1wy6a1 a.118.20.1 (A:7-167) H  28.1      60  0.0044   26.5   6.4   55   81-144    96-150 (161)
 78 d2o8pa1 a.118.7.1 (A:8-227) 14  27.0      84  0.0061   27.5   8.0   71   70-141   117-193 (220)
 79 d1fs1b1 a.157.1.1 (B:86-140) C  23.3      26  0.0019   24.1   2.8   19  462-480    35-53  (55)
 80 d1b89a_ a.118.1.3 (A:) Clathri  23.0 1.2E+02  0.0085   28.2   8.7   91   71-171    99-197 (336)
 81 d2ijqa1 a.246.2.1 (A:14-158) H  22.6 1.6E+02   0.012   23.9   8.4   61  117-177    20-89  (145)
 82 d1yvia1 a.24.10.2 (A:2-143) Hi  21.5 1.6E+02   0.012   23.3   8.2   13   82-94    104-116 (142)
 83 d2d2sa1 a.118.17.2 (A:525-753)  21.2 2.4E+02   0.017   24.2  12.1  102   67-174     8-111 (229)

No 1  
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=99.83  E-value=1.7e-19  Score=164.06  Aligned_cols=133  Identities=30%  Similarity=0.444  Sum_probs=121.8

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCc-------hhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSS-------EGRTLLLACSLNSMSCYLKTKQYDECIKVGSE  139 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~-------e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~  139 (559)
                      .+..+..++..|+.+|+.|+|.+|+..|.+||.+.+.....       ....+...+|+|+|.||+++++|++|+.+|++
T Consensus        13 ~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~   92 (153)
T d2fbna1          13 KVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASK   92 (153)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhc
Confidence            56678999999999999999999999999999988776532       23455678999999999999999999999999


Q ss_pred             HHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc
Q 008613          140 VLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKED  199 (559)
Q Consensus       140 AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~  199 (559)
                      +|+++|+++++|+++|.+|..+|+|++|+.+|+++++++|++..+...+..+..++++.+
T Consensus        93 al~~~p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~kl~~~~  152 (153)
T d2fbna1          93 VLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDIRNSYELCVNKLKEAR  152 (153)
T ss_dssp             HHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccchhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999999999999999999999999999999999999998887643


No 2  
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80  E-value=8.6e-19  Score=162.09  Aligned_cols=133  Identities=24%  Similarity=0.377  Sum_probs=122.6

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCc------hhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSS------EGRTLLLACSLNSMSCYLKTKQYDECIKVGSEV  140 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~------e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~A  140 (559)
                      .+..+..+++.|+.+|+.|+|++|+..|+++|.+.+.....      ....+...+|.|+|.||+++|+|++|+.+|+++
T Consensus         9 k~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~a   88 (170)
T d1p5qa1           9 KLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKA   88 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhh
Confidence            66679999999999999999999999999999998876542      245677789999999999999999999999999


Q ss_pred             HHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc
Q 008613          141 LAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKED  199 (559)
Q Consensus       141 L~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~  199 (559)
                      |+++|+++.+|+++|.+|..+|+|++|+.+|+++++++|+++.+...+..+...+.+..
T Consensus        89 l~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~  147 (170)
T d1p5qa1          89 LELDSNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQL  147 (170)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHH
T ss_pred             hhccccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988876554


No 3  
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=99.80  E-value=1.4e-18  Score=160.06  Aligned_cols=133  Identities=25%  Similarity=0.401  Sum_probs=122.2

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCc------hhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSS------EGRTLLLACSLNSMSCYLKTKQYDECIKVGSEV  140 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~------e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~A  140 (559)
                      .+..++.+++.|+.+|+.|+|.+|+.+|.+||.+.+.....      ....+...+|.|+|.||+++++|++|+.+|+++
T Consensus        11 ~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~a   90 (168)
T d1kt1a1          11 KLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKA   90 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhh
Confidence            55679999999999999999999999999999998876542      345667889999999999999999999999999


Q ss_pred             HHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc
Q 008613          141 LAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKED  199 (559)
Q Consensus       141 L~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~  199 (559)
                      |+++|+++++|+++|.+|..+|+|++|+.+|++++.++|+++.+...+..+...+....
T Consensus        91 l~l~p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~~~~~l~~~~~~~~~~~  149 (168)
T d1kt1a1          91 LGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQIFMCQKKAKEHN  149 (168)
T ss_dssp             HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hhcccchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhHH
Confidence            99999999999999999999999999999999999999999999999999988876543


No 4  
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80  E-value=5.5e-19  Score=153.35  Aligned_cols=115  Identities=23%  Similarity=0.275  Sum_probs=109.9

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVK  149 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~k  149 (559)
                      .+..++.+|+.+++.|+|++|+.+|+++|.++|.++.         +|+++|.||+++|+|++|+.+|+++++++|+++.
T Consensus         2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~~~~---------~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~   72 (117)
T d1elwa_           2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHV---------LYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGK   72 (117)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcchh---------hhhcccccccccccccccchhhhhHHHhccchhh
Confidence            3677899999999999999999999999999999865         9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008613          150 ALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKE  193 (559)
Q Consensus       150 al~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~  193 (559)
                      +|+++|.+|..+|+|++|+.+|+++++++|+++.++..++.++.
T Consensus        73 ~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l~~  116 (117)
T d1elwa_          73 GYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA  116 (117)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999999888764


No 5  
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.77  E-value=5.2e-18  Score=154.26  Aligned_cols=122  Identities=22%  Similarity=0.341  Sum_probs=114.3

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAK  146 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~  146 (559)
                      .+..++.++.+|+.+++.|+|++|+.+|.++++++|.++.         +|+++|.||+.+|++++|+.+|.++|+++|+
T Consensus         6 ~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~~~~---------~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~   76 (159)
T d1a17a_           6 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAI---------YYGNRSLAYLRTECYGYALGDATRAIELDKK   76 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchhhhh---------hhhhhHHHHHhccccchHHHHHHHHHHHccc
Confidence            4466899999999999999999999999999999998865         9999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 008613          147 NVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMK  197 (559)
Q Consensus       147 ~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~  197 (559)
                      ++.+|+++|.+|..+|+|++|+.+|++++.++|++..++..+..+...+++
T Consensus        77 ~~~a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~  127 (159)
T d1a17a_          77 YIKGYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQ  127 (159)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999888887665543


No 6  
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.74  E-value=1.6e-17  Score=152.72  Aligned_cols=133  Identities=27%  Similarity=0.482  Sum_probs=118.2

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCc-------hhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHH
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSS-------EGRTLLLACSLNSMSCYLKTKQYDECIKVGSE  139 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~-------e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~  139 (559)
                      .+..++.++..|+.++..|+|.+|+..|.++|.+.+.....       ........+|.|+|.||.++|+|++||.+|++
T Consensus        23 ~~~~a~~~~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~  102 (169)
T d1ihga1          23 ILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLE  102 (169)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhChhhHHHHHHHHHHHHhhcccchhhhhhhh
Confidence            34457778999999999999999999999999876543211       23566778999999999999999999999999


Q ss_pred             HHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhc
Q 008613          140 VLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKED  199 (559)
Q Consensus       140 AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~  199 (559)
                      ||+++|+++++|+++|.+|..+|+|++|+.+|+++++++|++..+...|..+...+....
T Consensus       103 al~~~p~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n~~~~~~l~~~~~~l~~~~  162 (169)
T d1ihga1         103 ALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQK  162 (169)
T ss_dssp             HHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhhhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999988876543


No 7  
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.72  E-value=9e-18  Score=155.95  Aligned_cols=102  Identities=26%  Similarity=0.375  Sum_probs=98.1

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKA  150 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~ka  150 (559)
                      ++.++++|+.|++.|+|++|+..|.++|.++|.++.         +|+|+|.||.++|+|++|+.+|.+||+++|+++.+
T Consensus         4 a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~---------~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a   74 (201)
T d2c2la1           4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAV---------YYTNRALCYLKMQQPEQALADCRRALELDGQSVKA   74 (201)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHH
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH---------HHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHH
Confidence            677999999999999999999999999999999865         99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 008613          151 LYRRGQAYKDIGRLEEAVSDLSNAHEVSPDD  181 (559)
Q Consensus       151 l~~rG~A~~~lg~~eeAi~dlekAl~l~P~~  181 (559)
                      |+++|.+|..+|+|++|+.+|++++.++|++
T Consensus        75 ~~~lg~~~~~l~~~~~A~~~~~~al~l~p~~  105 (201)
T d2c2la1          75 HFFLGQCQLEMESYDEAIANLQRAYSLAKEQ  105 (201)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999998854


No 8  
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.67  E-value=4.3e-16  Score=136.92  Aligned_cols=117  Identities=21%  Similarity=0.296  Sum_probs=105.8

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH-
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNV-  148 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~-  148 (559)
                      .+..++++|+.++..|+|++|+.+|+++|+++|.++.         +|+|+|.||.++|+|++|+.+|+++|+++|++. 
T Consensus         3 ~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~---------~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~   73 (128)
T d1elra_           3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMT---------YITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE   73 (128)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHH---------HHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHH
Confidence            4788999999999999999999999999999998755         999999999999999999999999999998874 


Q ss_pred             ------HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008613          149 ------KALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILM  196 (559)
Q Consensus       149 ------kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~  196 (559)
                            ++|+++|.++..+++|++|+.+|++++..+++ +.+...+..+.+.++
T Consensus        74 ~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~-~~~~~~l~~~~k~lk  126 (128)
T d1elra_          74 DYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT-PDVLKKCQQAEKILK  126 (128)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-HHHHHHHHHHHHHHh
Confidence                  68888999999999999999999999999875 567777777776664


No 9  
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=99.59  E-value=8.6e-15  Score=140.46  Aligned_cols=118  Identities=20%  Similarity=0.053  Sum_probs=108.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 008613           68 FNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN  147 (559)
Q Consensus        68 ~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~  147 (559)
                      ...+..++.+|.+|++.|+|++|+..|+++|.++|.++.         +|+++|.||.++|+|++|+.+|+++++++|++
T Consensus        34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~---------a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~  104 (259)
T d1xnfa_          34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE---------VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY  104 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHH---------HHhhhchHHHHHHHHHHhhhhhhHHHHHHhhh
Confidence            345888999999999999999999999999999999865         99999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008613          148 VKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEI  194 (559)
Q Consensus       148 ~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~  194 (559)
                      +.+|+++|.+|..+|++++|+..|+++++++|++......+..+...
T Consensus       105 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~  151 (259)
T d1xnfa_         105 NYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWLYLAEQK  151 (259)
T ss_dssp             THHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhhHHHHHHHHHHHHhhccccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999987766555544433


No 10 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.54  E-value=8.6e-15  Score=128.03  Aligned_cols=113  Identities=16%  Similarity=0.155  Sum_probs=102.7

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCC--HHH
Q 008613           76 KQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTK---QYDECIKVGSEVLAYDAKN--VKA  150 (559)
Q Consensus        76 ~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg---~y~eAi~~~~~AL~ldP~~--~ka  150 (559)
                      ++.+.++..++|.+|.+.|.++|.++|.++.         +++|+|.|+.+.+   ++++||..|++++..+|.+  +.+
T Consensus         4 ~l~n~~~~~~~l~~Ae~~Y~~aL~~~p~~~~---------~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~   74 (122)
T d1nzna_           4 AVLNELVSVEDLLKFEKKFQSEKAAGSVSKS---------TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDY   74 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH---------HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhhCCCCHH---------HHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHH
Confidence            4678899999999999999999999999876         9999999998744   5667999999999998766  569


Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHh
Q 008613          151 LYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMK  197 (559)
Q Consensus       151 l~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~  197 (559)
                      |+++|.+|..+|+|++|+.+|+++++++|++..+...+..+..++++
T Consensus        75 ~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l~~~I~~~~~k  121 (122)
T d1nzna_          75 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKK  121 (122)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999999888754


No 11 
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.53  E-value=7.8e-14  Score=138.38  Aligned_cols=132  Identities=13%  Similarity=0.081  Sum_probs=114.1

Q ss_pred             HHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHH
Q 008613           56 MRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIK  135 (559)
Q Consensus        56 a~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~  135 (559)
                      +...++..++..+..+..+..+|.++...|++.+|+..|.+++...|....         +++.++.+|.+.|+|++|+.
T Consensus       256 A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~---------~~~~l~~~~~~~~~~~~A~~  326 (388)
T d1w3ba_         256 AIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHAD---------SLNNLANIKREQGNIEEAVR  326 (388)
T ss_dssp             HHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHTTTCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccCCccch---------hhhHHHHHHHHCCCHHHHHH
Confidence            334444444445555778888999999999999999999999998887754         88899999999999999999


Q ss_pred             HHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Q 008613          136 VGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILM  196 (559)
Q Consensus       136 ~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~  196 (559)
                      .|+++++++|+++.+|+++|.+|..+|++++|+.+|+++++++|+++.++..|+.+...++
T Consensus       327 ~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~lg~~~~~~~  387 (388)
T d1w3ba_         327 LYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQ  387 (388)
T ss_dssp             HHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999999999999999999999999999999998887664


No 12 
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52  E-value=1.7e-13  Score=135.51  Aligned_cols=206  Identities=11%  Similarity=-0.009  Sum_probs=162.1

Q ss_pred             ChHHHHHHHHHHhcCCHHHHHHHHHHhhCCChHHHHHHHHH-HHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHH
Q 008613            4 NPELMRIATENMKNMRPEDLKCAAEQLTHTPPEEVAEIGEK-LANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELY   82 (559)
Q Consensus         4 ~pe~l~~A~e~mk~m~pedl~~a~e~l~~~~pee~~~~~~~-~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~   82 (559)
                      .++.++++..-++....++....++.+-...|+........ .....-.++..+...+...+...+.....+..+|.+++
T Consensus        19 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~   98 (323)
T d1fcha_          19 HPQPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFT   98 (323)
T ss_dssp             CSSHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHHhhhcccccccccccccccccc
Confidence            34557777777777777777777766666666654433221 11111233445666666666667777889999999999


Q ss_pred             HcCCHHHHHHHHHHHHHhcCCCCCc------------------------------hh------------hhhHHHHHHHH
Q 008613           83 SEGRFSNALQKYLLAKKNLQGIHSS------------------------------EG------------RTLLLACSLNS  120 (559)
Q Consensus        83 k~g~y~eAi~~Y~kAL~l~p~~~~~------------------------------e~------------~~l~~~~~~nl  120 (559)
                      ..|++++|+..|.+++.+.|.....                              +.            ......+++++
T Consensus        99 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l  178 (323)
T d1fcha_          99 NESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGL  178 (323)
T ss_dssp             HTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHH
T ss_pred             ccccccccccchhhHHHhccchHHHHHhhhhhhhhcccccchhhHHHHHHhhHHHHHHHHHHHHHHHhhcccccccchhh
Confidence            9999999999999999988764321                              00            01123568899


Q ss_pred             HHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcC
Q 008613          121 MSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDG  200 (559)
Q Consensus       121 A~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~  200 (559)
                      |.++...|++++|+..|++++.++|+++.+|+.+|.+|..+|++++|+..|+++++++|++..++..++.+...+++.++
T Consensus       179 ~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~  258 (323)
T d1fcha_         179 GVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRALELQPGYIRSRYNLGISCINLGAHRE  258 (323)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHH
T ss_pred             HHHHHHHHHHhhhhcccccccccccccccchhhhhhcccccccchhHHHHHHHHHHHhhccHHHHHHHHHHHHHCCCHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998887


Q ss_pred             CCCCccchh
Q 008613          201 HHGPRGLLI  209 (559)
Q Consensus       201 ~~~~~~~~i  209 (559)
                      +...+.+++
T Consensus       259 A~~~~~~al  267 (323)
T d1fcha_         259 AVEHFLEAL  267 (323)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            777777666


No 13 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=99.51  E-value=2.3e-14  Score=129.62  Aligned_cols=112  Identities=17%  Similarity=0.255  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCch---hhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSE---GRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAK  146 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e---~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~  146 (559)
                      .+..++..|+.++..|+|++|+..|+++|++.+..+...   .....+.+|+|+|.||.++|+|++|+.+|+++|++.|.
T Consensus         8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~   87 (156)
T d2hr2a1           8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR   87 (156)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence            355566779999999999999999999999999877532   33446779999999999999999999999999987542


Q ss_pred             -----------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 008613          147 -----------NVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDD  181 (559)
Q Consensus       147 -----------~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~  181 (559)
                                 ...+|+++|.+|..+|++++|+.+|++++++.|+.
T Consensus        88 ~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~  133 (156)
T d2hr2a1          88 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER  133 (156)
T ss_dssp             HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred             cccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence                       35689999999999999999999999999997643


No 14 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.50  E-value=6e-14  Score=131.63  Aligned_cols=119  Identities=16%  Similarity=0.085  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVK  149 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~k  149 (559)
                      .+-.++++|..++..|+|++|++.|.++   .+.+         ..+|+|+|.||..+|+|++|+.+|++||+++|+++.
T Consensus         4 ~~~~l~~~g~~~~~~~d~~~Al~~~~~i---~~~~---------~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~   71 (192)
T d1hh8a_           4 EAISLWNEGVLAADKKDWKGALDAFSAV---QDPH---------SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAV   71 (192)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHTS---SSCC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHhc---CCCC---------HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhh
Confidence            3567889999999999999999999864   3333         238999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----------------HHHHHHHHHHHHHHHhhcC
Q 008613          150 ALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDD----------------GTIADVLRDAKEILMKEDG  200 (559)
Q Consensus       150 al~~rG~A~~~lg~~eeAi~dlekAl~l~P~~----------------~~a~~~L~~a~~~l~~~~~  200 (559)
                      +|+++|.+|..+|+|++|+.+|++++...+.+                .+++..++.+...+++...
T Consensus        72 a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~  138 (192)
T d1hh8a_          72 AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKK  138 (192)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHH
T ss_pred             hHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHH
Confidence            99999999999999999999999999876653                2455666777666655544


No 15 
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.49  E-value=9.8e-14  Score=139.86  Aligned_cols=139  Identities=7%  Similarity=-0.034  Sum_probs=119.7

Q ss_pred             CCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCCCCchhh
Q 008613           32 HTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEG-RFSNALQKYLLAKKNLQGIHSSEGR  110 (559)
Q Consensus        32 ~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g-~y~eAi~~Y~kAL~l~p~~~~~e~~  110 (559)
                      ....++......++..+.|+.                  ..+|..+|.++...+ +|++|+..|.++++++|.+..    
T Consensus        56 ~e~~~~Al~~~~~ai~lnP~~------------------~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p~~~~----  113 (315)
T d2h6fa1          56 DERSERAFKLTRDAIELNAAN------------------YTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQ----  113 (315)
T ss_dssp             TCCCHHHHHHHHHHHHHCTTC------------------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCHH----
T ss_pred             CCchHHHHHHHHHHHHHCCCC------------------hHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhhh----
Confidence            344555555555566666665                  889999999999876 499999999999999998865    


Q ss_pred             hhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHH
Q 008613          111 TLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRD  190 (559)
Q Consensus       111 ~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~  190 (559)
                           +|+++|.|+.++|+|++|+.+|+++++++|++..+|+++|.++..++++++|+.+|+++++++|.+..++..++.
T Consensus       114 -----a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~p~n~~a~~~r~~  188 (315)
T d2h6fa1         114 -----VWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYF  188 (315)
T ss_dssp             -----HHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred             -----HHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHCCccHHHHHHHHH
Confidence                 999999999999999999999999999999999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHh
Q 008613          191 AKEILMK  197 (559)
Q Consensus       191 a~~~l~~  197 (559)
                      +...++.
T Consensus       189 ~l~~~~~  195 (315)
T d2h6fa1         189 VISNTTG  195 (315)
T ss_dssp             HHHHTTC
T ss_pred             HHHHccc
Confidence            8766543


No 16 
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.48  E-value=5e-14  Score=142.05  Aligned_cols=135  Identities=8%  Similarity=-0.080  Sum_probs=125.5

Q ss_pred             HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcC
Q 008613           66 YEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQ-YDECIKVGSEVLAYD  144 (559)
Q Consensus        66 ~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~-y~eAi~~~~~AL~ld  144 (559)
                      +.+.-++.+...|.++.+.++|++|+.+|++||+++|.+..         +|++||.|+..+++ +++|+.+|+++++++
T Consensus        38 ~~p~~~~a~~~~~~~~~~~e~~~~Al~~~~~ai~lnP~~~~---------a~~~r~~~l~~l~~~~~eal~~~~~al~~~  108 (315)
T d2h6fa1          38 YSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYT---------VWHFRRVLLKSLQKDLHEEMNYITAIIEEQ  108 (315)
T ss_dssp             CCHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCCHHHHHHHHHHHHHHC
T ss_pred             cCHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHCCCChH---------HHHHHHHHHHHhCcCHHHHHHHHHHHHHHH
Confidence            45566888888999999999999999999999999999865         99999999999875 999999999999999


Q ss_pred             CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCCccchh
Q 008613          145 AKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGHHGPRGLLI  209 (559)
Q Consensus       145 P~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~~~~~~~~i  209 (559)
                      |++..+|++||.++..+|++++|+.+|+++++++|++..++..++.+...+++.+.+...+.++|
T Consensus       109 p~~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~dp~n~~a~~~~~~~~~~~~~~~~Al~~~~~al  173 (315)
T d2h6fa1         109 PKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLL  173 (315)
T ss_dssp             TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred             HhhhhHHHHHhHHHHhhccHHHHHHHHhhhhhhhhcchHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999988887776677666


No 17 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=99.47  E-value=1.2e-13  Score=118.24  Aligned_cols=94  Identities=7%  Similarity=-0.045  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHH
Q 008613           73 MLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALY  152 (559)
Q Consensus        73 ~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~  152 (559)
                      .++..|.++++.|+|.+|+..|++++.++|.++.         +|+++|.||.+.+++++|+.+++++++++|+++.+|+
T Consensus        18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~---------a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~   88 (112)
T d1hxia_          18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREE---------AWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHA   88 (112)
T ss_dssp             CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHhhhcccccccch---------hhhhhhhhhhhhhhHHHhhcccccccccccccccchH
Confidence            3567899999999999999999999999999865         9999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHH
Q 008613          153 RRGQAYKDIGRLEEAVSDLSNAH  175 (559)
Q Consensus       153 ~rG~A~~~lg~~eeAi~dlekAl  175 (559)
                      .+|.+|...|++++|++.|++.|
T Consensus        89 ~la~~y~~~g~~~~A~~~l~~~l  111 (112)
T d1hxia_          89 ALAVSHTNEHNANAALASLRAWL  111 (112)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHh
Confidence            99999999999999999999986


No 18 
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45  E-value=3.4e-13  Score=133.62  Aligned_cols=143  Identities=17%  Similarity=0.068  Sum_probs=127.0

Q ss_pred             HHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHH
Q 008613           58 ARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVG  137 (559)
Q Consensus        58 ~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~  137 (559)
                      ..+..........+..+...|.++++.|+|++|+..|.+++++.|.++.         +|+++|.+|...|++++|+..+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~---------~~~~l~~~~~~~~~~~~A~~~~  294 (388)
T d1w3ba_         224 AAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPD---------AYCNLANALKEKGSVAEAEDCY  294 (388)
T ss_dssp             HHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSCHH---------HHHHHHHHHHHHSCHHHHHHHH
T ss_pred             HHHHHhHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHH---------HHHHHHHHHHHcCCHHHHHHHH
Confidence            3344444444455777888999999999999999999999999998765         8999999999999999999999


Q ss_pred             HHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCCccchh
Q 008613          138 SEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGHHGPRGLLI  209 (559)
Q Consensus       138 ~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~~~~~~~~i  209 (559)
                      ..++...|.+...++.+|.+|..+|++++|+..|+++++++|++..++..++.+...+++.+++...+++++
T Consensus       295 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al  366 (388)
T d1w3ba_         295 NTALRLCPTHADSLNNLANIKREQGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAI  366 (388)
T ss_dssp             HHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             HhhhccCCccchhhhHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999998887777666666655


No 19 
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45  E-value=2.7e-13  Score=134.17  Aligned_cols=202  Identities=10%  Similarity=0.053  Sum_probs=159.3

Q ss_pred             HHHHHHHHHhhCCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 008613           21 EDLKCAAEQLTHTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKN  100 (559)
Q Consensus        21 edl~~a~e~l~~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l  100 (559)
                      ..+.+....+..++.++......++....|..                  +..|..+|.+++..|+|++|+..|.+++++
T Consensus        21 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~------------------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~   82 (323)
T d1fcha_          21 QPFEEGLRRLQEGDLPNAVLLFEAAVQQDPKH------------------MEAWQYLGTTQAENEQELLAISALRRCLEL   82 (323)
T ss_dssp             SHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTC------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC------------------HHHHHHHHHHHHHcCChHHHHHHHHhhhcc
Confidence            34667777788888888888888888877777                  889999999999999999999999999999


Q ss_pred             cCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC----------------------------------
Q 008613          101 LQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAK----------------------------------  146 (559)
Q Consensus       101 ~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~----------------------------------  146 (559)
                      .|.++.         +|+++|.||...|++++|+..+.+++.++|+                                  
T Consensus        83 ~p~~~~---------~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (323)
T d1fcha_          83 KPDNQT---------ALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFL  153 (323)
T ss_dssp             CTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTHHHHHHHHHH
T ss_pred             cccccc---------ccccccccccccccccccccchhhHHHhccchHHHHHhhhhhhhhcccccchhhHHHHHHhhHHH
Confidence            998754         8999999999999999988888777655443                                  


Q ss_pred             -----------------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCCccchh
Q 008613          147 -----------------NVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGHHGPRGLLI  209 (559)
Q Consensus       147 -----------------~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~~~~~~~~i  209 (559)
                                       ++.+++.+|.++...|++++|+..|++++.++|++..++..++.+...+++...+...+.+++
T Consensus       154 ~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al  233 (323)
T d1fcha_         154 EVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAYRRAL  233 (323)
T ss_dssp             HHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccccccccchhhhhhcccccccchhHHHHHHHHH
Confidence                             345688899999999999999999999999999999999999999999888777666666555


Q ss_pred             hhhchhhhccCCCCCCCCchhhhhhhcCCCCCCCCCCCCCCCCCCCccccCCCCCHHHHHHHHHHHHcCCcch
Q 008613          210 EEITEEVGAVSSGSHRSSGTEYLAREKADPSKSEHSANGRGSSTKPEFLPDLKDDPESIRSFQNFISNANPDS  282 (559)
Q Consensus       210 ~e~~e~~~~~~~~~~~~s~~~~~~~e~~~s~~~~~~~~~~~~~~~~~~l~~l~~~PEai~~~~~~i~~~dpe~  282 (559)
                      + ..+.....            .                   ......+..++++.+|++.|.+.|+ ++|+.
T Consensus       234 ~-~~p~~~~a------------~-------------------~~lg~~~~~~g~~~~A~~~~~~al~-l~p~~  273 (323)
T d1fcha_         234 E-LQPGYIRS------------R-------------------YNLGISCINLGAHREAVEHFLEALN-MQRKS  273 (323)
T ss_dssp             H-HCTTCHHH------------H-------------------HHHHHHHHHHTCHHHHHHHHHHHHH-HHHTC
T ss_pred             H-HhhccHHH------------H-------------------HHHHHHHHHCCCHHHHHHHHHHHHH-hCCcC
Confidence            2 11111000            0                   0011123345789999999999998 35543


No 20 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.44  E-value=7.3e-13  Score=124.06  Aligned_cols=102  Identities=17%  Similarity=0.157  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN---  147 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~---  147 (559)
                      +..++++|.+++..|+|++|+..|.+||+++|.++.         +|+++|.||.++|+|++|+.+|++++...+.+   
T Consensus        36 ~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~~---------a~~~~g~~~~~~g~~~~A~~~~~kAl~~~~~n~~~  106 (192)
T d1hh8a_          36 SRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAV---------AYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLI  106 (192)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEE
T ss_pred             HHHHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhhh---------hHHHHHHHHHhhccHHHHHHHHHHHHHhCccCchH
Confidence            567899999999999999999999999999999865         99999999999999999999999999876543   


Q ss_pred             -------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Q 008613          148 -------------VKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDD  181 (559)
Q Consensus       148 -------------~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~  181 (559)
                                   ..+++++|.+|..+|++++|+..|++++.+.|+.
T Consensus       107 ~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~~  153 (192)
T d1hh8a_         107 DYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP  153 (192)
T ss_dssp             ECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred             HHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence                         4789999999999999999999999999998874


No 21 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.41  E-value=2.9e-13  Score=121.36  Aligned_cols=110  Identities=18%  Similarity=0.076  Sum_probs=97.6

Q ss_pred             HHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHc----------CCHHHHHHHHHHHHHcCCCCHH
Q 008613           80 ELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKT----------KQYDECIKVGSEVLAYDAKNVK  149 (559)
Q Consensus        80 ~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylkl----------g~y~eAi~~~~~AL~ldP~~~k  149 (559)
                      .+-+.+.|++|+..|+++++++|.++.         +|+++|.||..+          +.+++|+..|++||+++|+++.
T Consensus         6 ~~~r~~~fe~A~~~~e~al~~~P~~~~---------~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~   76 (145)
T d1zu2a1           6 EFDRILLFEQIRQDAENTYKSNPLDAD---------NLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE   76 (145)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHccHHHHHHHHHHHHhhCCcchH---------HHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhH
Confidence            455667799999999999999999976         999999999855          5568999999999999999999


Q ss_pred             HHHHHHHHHHHcCC-----------HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 008613          150 ALYRRGQAYKDIGR-----------LEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKE  198 (559)
Q Consensus       150 al~~rG~A~~~lg~-----------~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~  198 (559)
                      +|+++|.+|..+|+           |++|+.+|++++.++|++..++..|+...+..+.+
T Consensus        77 a~~~lG~~y~~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~  136 (145)
T d1zu2a1          77 AVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLH  136 (145)
T ss_dssp             HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHH
T ss_pred             HHhhHHHHHHHcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999988764           79999999999999999999999999887666443


No 22 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=99.31  E-value=3.4e-12  Score=121.95  Aligned_cols=120  Identities=9%  Similarity=-0.126  Sum_probs=103.6

Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCH
Q 008613           85 GRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRL  164 (559)
Q Consensus        85 g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~  164 (559)
                      .+++.|+..+.+++...+..     ....+.+|+++|.||.++|+|++|+..|+++|+++|+++.+|+++|.+|..+|++
T Consensus        13 ~~~e~al~~~~e~l~~~~~~-----~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~~~~~~g~~   87 (259)
T d1xnfa_          13 LQQEVILARMEQILASRALT-----DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNF   87 (259)
T ss_dssp             HHHHHHHHHHHHHHTSSCCC-----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHHHhhhcC-----CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhchHHHHHHHH
Confidence            35678888888887643322     2335679999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCCccchh
Q 008613          165 EEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGHHGPRGLLI  209 (559)
Q Consensus       165 eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~~~~~~~~i  209 (559)
                      ++|+.+|+++++++|++..++..++.+...+++...+...+++++
T Consensus        88 ~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al  132 (259)
T d1xnfa_          88 DAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFY  132 (259)
T ss_dssp             HHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHhhhhhhHHHHHHhhhhhhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence            999999999999999999999999999988887766555555554


No 23 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.27  E-value=1.1e-11  Score=102.60  Aligned_cols=89  Identities=12%  Similarity=-0.003  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKA  150 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~ka  150 (559)
                      ++.++++|..+++.|+|.+|+..|.+|+++.|..+..  ......+|.|+|.||.++|+|++|+..|+++|+++|+++.+
T Consensus         5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~--~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a   82 (95)
T d1tjca_           5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRA   82 (95)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhcc--CccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHH
Confidence            4568899999999999999999999999998876532  22346789999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHc
Q 008613          151 LYRRGQAYKDI  161 (559)
Q Consensus       151 l~~rG~A~~~l  161 (559)
                      +++++.....+
T Consensus        83 ~~Nl~~~~~~l   93 (95)
T d1tjca_          83 NGNLKYFEYIM   93 (95)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99988776554


No 24 
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.21  E-value=2e-10  Score=103.06  Aligned_cols=115  Identities=10%  Similarity=0.068  Sum_probs=94.6

Q ss_pred             HHhhCCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCc
Q 008613           28 EQLTHTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSS  107 (559)
Q Consensus        28 e~l~~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~  107 (559)
                      ..++..+.++......++....|..                  +..|..+|.+++..|+|.+|+..|.++|+++|.+.. 
T Consensus        19 ~~~~~~~y~~A~~~~~~al~~~p~~------------------~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~~~-   79 (159)
T d1a17a_          19 DYFKAKDYENAIKFYSQAIELNPSN------------------AIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIK-   79 (159)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHSTTC------------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH-
T ss_pred             HHHHcCCHHHHHHHhhhccccchhh------------------hhhhhhhHHHHHhccccchHHHHHHHHHHHcccchH-
Confidence            3455566666666666666655555                  999999999999999999999999999999999865 


Q ss_pred             hhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc--CCHHHHHH
Q 008613          108 EGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDI--GRLEEAVS  169 (559)
Q Consensus       108 e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~l--g~~eeAi~  169 (559)
                              +|+++|.||..+|+|++|+.+|.++++++|+++.++..++.+...+  +.+++|+.
T Consensus        80 --------a~~~~g~~~~~~g~~~eA~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~~~a~~  135 (159)
T d1a17a_          80 --------GYYRRAASNMALGKFRAALRDYETVVKVKPHDKDAKMKYQECNKIVKQKAFERAIA  135 (159)
T ss_dssp             --------HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                    8999999999999999999999999999999999988887775433  33444443


No 25 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.21  E-value=2.1e-10  Score=106.19  Aligned_cols=114  Identities=12%  Similarity=0.039  Sum_probs=101.5

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCc-------------hhhhhHHHHHHHHHHHHHHcCCHHHH
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSS-------------EGRTLLLACSLNSMSCYLKTKQYDEC  133 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~-------------e~~~l~~~~~~nlA~~ylklg~y~eA  133 (559)
                      .+...+.++..|+.+...|++++|+..|.+||.+.+.....             ........++.+++.+++++|+|++|
T Consensus         7 D~~~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~A   86 (179)
T d2ff4a2           7 DLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAV   86 (179)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHH
Confidence            45568889999999999999999999999999998765421             23455678999999999999999999


Q ss_pred             HHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH-------HHhCCC
Q 008613          134 IKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNA-------HEVSPD  180 (559)
Q Consensus       134 i~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekA-------l~l~P~  180 (559)
                      +.+|+++++++|.+..+|++++.+|..+|++.+|+..|+++       +.++|.
T Consensus        87 l~~~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~  140 (179)
T d2ff4a2          87 IAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG  140 (179)
T ss_dssp             HHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred             HHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcC
Confidence            99999999999999999999999999999999999999998       446675


No 26 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.20  E-value=9.8e-11  Score=100.28  Aligned_cols=106  Identities=8%  Similarity=0.028  Sum_probs=92.1

Q ss_pred             HHHhhCCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCC
Q 008613           27 AEQLTHTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHS  106 (559)
Q Consensus        27 ~e~l~~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~  106 (559)
                      -..+...+.++......++....|..                  +..+..+|.+++..|+|.+|+..|.+++.++|.++.
T Consensus        11 ~~~~~~g~~~eAi~~~~~al~~~p~~------------------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~   72 (117)
T d1elwa_          11 NKALSVGNIDDALQCYSEAIKLDPHN------------------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGK   72 (117)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHCTTC------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHhcCCcc------------------hhhhhcccccccccccccccchhhhhHHHhccchhh
Confidence            33555666666666666666666666                  999999999999999999999999999999999865


Q ss_pred             chhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 008613          107 SEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYK  159 (559)
Q Consensus       107 ~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~  159 (559)
                               +|+++|.||..+|+|++|+..|+++++++|+++.++..++.+..
T Consensus        73 ---------~~~~~g~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~l~~  116 (117)
T d1elwa_          73 ---------GYSRKAAALEFLNRFEEAKRTYEEGLKHEANNPQLKEGLQNMEA  116 (117)
T ss_dssp             ---------HHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHhC
Confidence                     99999999999999999999999999999999999999887753


No 27 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.18  E-value=1.9e-11  Score=112.44  Aligned_cols=94  Identities=12%  Similarity=0.029  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008613          116 CSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEIL  195 (559)
Q Consensus       116 ~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l  195 (559)
                      .+.+.|.+|++.|+|++|+..|+++|+++|+++.+|+++|.+|..+|+|++|+.+|++++.++|++..++..++.+...+
T Consensus         6 ~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~~a~~~lg~~~~~l   85 (201)
T d2c2la1           6 ELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEM   85 (201)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence            56789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCccchh
Q 008613          196 MKEDGHHGPRGLLI  209 (559)
Q Consensus       196 ~~~~~~~~~~~~~i  209 (559)
                      ++...+...+++++
T Consensus        86 ~~~~~A~~~~~~al   99 (201)
T d2c2la1          86 ESYDEAIANLQRAY   99 (201)
T ss_dssp             TCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            88877666666555


No 28 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=99.18  E-value=3.8e-11  Score=102.23  Aligned_cols=87  Identities=14%  Similarity=0.069  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHH
Q 008613          116 CSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEIL  195 (559)
Q Consensus       116 ~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l  195 (559)
                      .++++|.++++.|+|++|+..|+++++++|+++.+|+.+|.+|..++++++|+.+|+++++++|++..++..|+.+...+
T Consensus        18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~la~~y~~~   97 (112)
T d1hxia_          18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNE   97 (112)
T ss_dssp             CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhhhhhhhhHHHhhcccccccccccccccchHHHHHHHHHC
Confidence            46789999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             HhhcCCC
Q 008613          196 MKEDGHH  202 (559)
Q Consensus       196 ~~~~~~~  202 (559)
                      ++...+.
T Consensus        98 g~~~~A~  104 (112)
T d1hxia_          98 HNANAAL  104 (112)
T ss_dssp             HHHHHHH
T ss_pred             CCHHHHH
Confidence            8766543


No 29 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.15  E-value=4.3e-11  Score=127.71  Aligned_cols=122  Identities=7%  Similarity=-0.074  Sum_probs=87.2

Q ss_pred             HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 008613           66 YEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDA  145 (559)
Q Consensus        66 ~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP  145 (559)
                      ..+..+..+...|..+.+.+++.+|+..|.+++.+++.           .+++++|.++...++|++|+.+|.+|++++|
T Consensus       115 l~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~-----------~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P  183 (497)
T d1ya0a1         115 VDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQ-----------HCLVHLGDIARYRNQTSQAESYYRHAAQLVP  183 (497)
T ss_dssp             ----------------------------CCHHHHHHHH-----------HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred             CChhhHHHHHHhHHHHHhCCCHHHHHHHHHHHhCCCHH-----------HHHHHHHHHHHHcccHHHHHHHHHHHHHHCC
Confidence            34556677888999999999999999999999987553           2899999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhh
Q 008613          146 KNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKE  198 (559)
Q Consensus       146 ~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~  198 (559)
                      ++..+|+.+|.+|...|++.+|+.+|.+++.++|.++.++..|..+.....+.
T Consensus       184 ~~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~~~~~~a~~nL~~~~~~~~~~  236 (497)
T d1ya0a1         184 SNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALES  236 (497)
T ss_dssp             TBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCCHHHHHHHHHHHHHHTTS
T ss_pred             CchHHHHHHHHHHHHcCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999887776543


No 30 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.14  E-value=1.2e-10  Score=96.18  Aligned_cols=82  Identities=16%  Similarity=0.062  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHH
Q 008613          115 ACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN-------VKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADV  187 (559)
Q Consensus       115 ~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~-------~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~  187 (559)
                      .-++++|.++++.|+|.+|+..|++|+++.|.+       +.+|+++|.+|..+|++++|+..|+++|+++|+++.++..
T Consensus         6 ddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~N   85 (95)
T d1tjca_           6 EDSFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGN   85 (95)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHHH
Confidence            357899999999999999999999999986654       6899999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 008613          188 LRDAKEILM  196 (559)
Q Consensus       188 L~~a~~~l~  196 (559)
                      +..++..+.
T Consensus        86 l~~~~~~l~   94 (95)
T d1tjca_          86 LKYFEYIMA   94 (95)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhC
Confidence            999888774


No 31 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.10  E-value=1.1e-09  Score=99.28  Aligned_cols=94  Identities=10%  Similarity=0.004  Sum_probs=85.3

Q ss_pred             HhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCC
Q 008613           66 YEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDA  145 (559)
Q Consensus        66 ~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP  145 (559)
                      ..+..+..+.++|.++++.|+|++||..|+++|+++|.++.         +|+++|.||..+|+|++|+.+|.++++++|
T Consensus        72 ~~~~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~p~~~~---------a~~~~g~~~~~l~~~~~A~~~~~~al~l~p  142 (169)
T d1ihga1          72 LQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTK---------ALYRRAQGWQGLKEYDQALADLKKAQEIAP  142 (169)
T ss_dssp             GHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred             hChhhHHHHHHHHHHHHhhcccchhhhhhhhhhhhhhhhhh---------HHHhHHHHHHHccCHHHHHHHHHHHHHhCC
Confidence            35566888999999999999999999999999999998865         999999999999999999999999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCHHHHH
Q 008613          146 KNVKALYRRGQAYKDIGRLEEAV  168 (559)
Q Consensus       146 ~~~kal~~rG~A~~~lg~~eeAi  168 (559)
                      ++..++..++.++..+..+.++.
T Consensus       143 ~n~~~~~~l~~~~~~l~~~~~~~  165 (169)
T d1ihga1         143 EDKAIQAELLKVKQKIKAQKDKE  165 (169)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999988877766653


No 32 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.09  E-value=8.5e-11  Score=102.31  Aligned_cols=96  Identities=14%  Similarity=0.042  Sum_probs=82.9

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Q 008613          114 LACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKE  193 (559)
Q Consensus       114 ~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~  193 (559)
                      +..+.++|.+|+..|+|++|+.+|+++|+++|+++.+|+++|.+|..+|+|++|+.+|++++.++|++...+..++.+..
T Consensus         4 a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~   83 (128)
T d1elra_           4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA   83 (128)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence            34677999999999999999999999999999999999999999999999999999999999999998777777777766


Q ss_pred             HHHhhcCCCCCccchh
Q 008613          194 ILMKEDGHHGPRGLLI  209 (559)
Q Consensus       194 ~l~~~~~~~~~~~~~i  209 (559)
                      .++........+..++
T Consensus        84 ~lg~~~~~~~~~~~A~   99 (128)
T d1elra_          84 RIGNSYFKEEKYKDAI   99 (128)
T ss_dssp             HHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHhCCHHHHH
Confidence            6666555455555454


No 33 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=99.08  E-value=9.5e-10  Score=99.88  Aligned_cols=96  Identities=10%  Similarity=-0.045  Sum_probs=84.1

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVK  149 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~k  149 (559)
                      ....+.++|.+|++.|+|.+|+..|+++|.++|.+..         +|+++|.||..+|+|++|+.+|.+++.++|++..
T Consensus        63 ~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p~~~~---------a~~~~~~~~~~l~~~~~A~~~~~~al~l~P~n~~  133 (168)
T d1kt1a1          63 LLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEK---------GLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKA  133 (168)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHH
T ss_pred             HHHHHHhHHHHHHHhhhcccchhhhhhhhhcccchHH---------HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHH
Confidence            3566788999999999999999999999999998854         9999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCHHH-HHHHHHHH
Q 008613          150 ALYRRGQAYKDIGRLEE-AVSDLSNA  174 (559)
Q Consensus       150 al~~rG~A~~~lg~~ee-Ai~dlekA  174 (559)
                      ++..++.+...++.+.+ ....|.+.
T Consensus       134 ~~~~l~~~~~~~~~~~e~~kk~~~~~  159 (168)
T d1kt1a1         134 ARLQIFMCQKKAKEHNERDRRTYANM  159 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            99999999888877654 33333333


No 34 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.04  E-value=1.6e-09  Score=98.74  Aligned_cols=89  Identities=12%  Similarity=-0.075  Sum_probs=81.4

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKA  150 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~ka  150 (559)
                      ...+.+.|.+|++.|+|++|+..|+++|.++|.++.         +|+++|.||..+|+|++|+.+|.++++++|+++.+
T Consensus        62 ~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p~~~~---------a~~~~g~~~~~~g~~~~A~~~~~~al~l~P~n~~~  132 (170)
T d1p5qa1          62 LASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEK---------GLSRRGEAHLAVNDFELARADFQKVLQLYPNNKAA  132 (170)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHH
T ss_pred             HHHHHHHHHHHHhhhhcccccchhhhhhhccccchh---------hhHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHH
Confidence            456778999999999999999999999999998855         99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCHHHHH
Q 008613          151 LYRRGQAYKDIGRLEEAV  168 (559)
Q Consensus       151 l~~rG~A~~~lg~~eeAi  168 (559)
                      +..++.++..++++.+..
T Consensus       133 ~~~l~~~~~~~~~~~~~e  150 (170)
T d1p5qa1         133 KTQLAVCQQRIRRQLARE  150 (170)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999988887766543


No 35 
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.02  E-value=1.5e-09  Score=108.21  Aligned_cols=159  Identities=12%  Similarity=-0.001  Sum_probs=130.2

Q ss_pred             hHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHH
Q 008613           35 PEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLL  114 (559)
Q Consensus        35 pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~  114 (559)
                      .++......++....|+...+        +.+.......+...+..+...+++.+|+.+|++++..+|.++.        
T Consensus        45 ~~~al~~~~~~l~~~P~~~~a--------~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~pk~~~--------  108 (334)
T d1dcea1          45 DESVLELTSQILGANPDFATL--------WNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNPKSYG--------  108 (334)
T ss_dssp             SHHHHHHHHHHHHHCTTCHHH--------HHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCTTCHH--------
T ss_pred             cHHHHHHHHHHHHHCCCcHHH--------HHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCCCcHH--------
Confidence            356666777777777776221        1112222344555666777888899999999999999999865        


Q ss_pred             HHHHHHHHHHHHcCC--HHHHHHHHHHHHHcCCCCHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008613          115 ACSLNSMSCYLKTKQ--YDECIKVGSEVLAYDAKNVKAL-YRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDA  191 (559)
Q Consensus       115 ~~~~nlA~~ylklg~--y~eAi~~~~~AL~ldP~~~kal-~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a  191 (559)
                       +|++++.++..+++  +++|+..+.++++++|++..++ +.+|.++...+++++|+..+++++.++|++..++..++.+
T Consensus       109 -~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~a~~~l~~~  187 (334)
T d1dcea1         109 -TWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCL  187 (334)
T ss_dssp             -HHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHHHHHHHHHH
T ss_pred             -HHHHhhHHHHHhccccHHHHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence             89999999988875  8999999999999999999886 5778999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCCCCCccchhh
Q 008613          192 KEILMKEDGHHGPRGLLIE  210 (559)
Q Consensus       192 ~~~l~~~~~~~~~~~~~i~  210 (559)
                      ...+++...+...+...+.
T Consensus       188 ~~~~~~~~~A~~~~~~~~~  206 (334)
T d1dcea1         188 LPQLHPQPDSGPQGRLPEN  206 (334)
T ss_dssp             HHHHSCCCCSSSCCSSCHH
T ss_pred             HHHhcCHHHHHHHHHHhHH
Confidence            9999998887777666553


No 36 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=98.98  E-value=2.3e-09  Score=95.85  Aligned_cols=84  Identities=5%  Similarity=-0.095  Sum_probs=76.6

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHH
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKA  150 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~ka  150 (559)
                      ...+.++|.+|++.|+|.+|+..|.++|.++|.+..         +|+++|.||..+|+|++|+.+|.++++++|++..+
T Consensus        67 ~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~p~~~k---------a~~~~g~~~~~lg~~~~A~~~~~~al~l~P~n~~~  137 (153)
T d2fbna1          67 ISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVK---------ALYKLGVANMYFGFLEEAKENLYKAASLNPNNLDI  137 (153)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHH---------HHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHH
T ss_pred             HHHHhhHHHHHHHhcccchhhhhhhccccccchhhh---------hhHHhHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence            456788999999999999999999999999998754         99999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCC
Q 008613          151 LYRRGQAYKDIGR  163 (559)
Q Consensus       151 l~~rG~A~~~lg~  163 (559)
                      ...+..+...+++
T Consensus       138 ~~~l~~~~~kl~~  150 (153)
T d2fbna1         138 RNSYELCVNKLKE  150 (153)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9888888766543


No 37 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.93  E-value=7.7e-10  Score=95.88  Aligned_cols=104  Identities=9%  Similarity=-0.012  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHc
Q 008613           51 EEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEG---RFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKT  127 (559)
Q Consensus        51 ee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g---~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylkl  127 (559)
                      +++..+.+..+..+...+..++.+++.|.++++.+   ++.+||..|.+++...|...       ...+|+++|.||.++
T Consensus        13 ~~l~~Ae~~Y~~aL~~~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~-------~~~~~~~Lg~~y~~~   85 (122)
T d1nzna_          13 EDLLKFEKKFQSEKAAGSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEE-------QRDYVFYLAVGNYRL   85 (122)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHH-------HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCch-------HHHHHHHHHHHHHHH
Confidence            44445555555555556666999999999998755   45679999999998755431       245899999999999


Q ss_pred             CCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHc
Q 008613          128 KQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDI  161 (559)
Q Consensus       128 g~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~l  161 (559)
                      |+|++|+.+|+++|+++|++..++..++.+...+
T Consensus        86 g~~~~A~~~~~~aL~~~P~~~~A~~l~~~I~~~~  119 (122)
T d1nzna_          86 KEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM  119 (122)
T ss_dssp             TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999888777654


No 38 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=98.93  E-value=8.8e-10  Score=98.09  Aligned_cols=104  Identities=14%  Similarity=0.037  Sum_probs=84.3

Q ss_pred             HHHHHHHHhHHhHHHHHHHHHHHHHHHH----------cCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHH
Q 008613           56 MRARIDAQMNYEFNAAKMLKKQGNELYS----------EGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYL  125 (559)
Q Consensus        56 a~~~l~~~~~~~~~~a~~lk~~Gn~~~k----------~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~yl  125 (559)
                      +...++..++..+..++.+...|.+++.          .+.+++|+..|++||+++|.++.         +|+++|.+|.
T Consensus        16 A~~~~e~al~~~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~P~~~~---------a~~~lG~~y~   86 (145)
T d1zu2a1          16 IRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKKDE---------AVWCIGNAYT   86 (145)
T ss_dssp             HHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTCHH---------HHHHHHHHHH
T ss_pred             HHHHHHHHHhhCCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhcchhhH---------HHhhHHHHHH
Confidence            3344444444455559999999999885          45568999999999999999865         9999999998


Q ss_pred             HcCC-----------HHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHH
Q 008613          126 KTKQ-----------YDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAV  168 (559)
Q Consensus       126 klg~-----------y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi  168 (559)
                      .+|+           |++|+.+|.++++++|++..++..++.+....+.|.++.
T Consensus        87 ~~g~~~~~~~~~~~~~~~A~~~~~kal~l~P~~~~~~~~L~~~~ka~~~~~e~~  140 (145)
T d1zu2a1          87 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEAY  140 (145)
T ss_dssp             HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HcccchhhHHHHHHhHHHhhhhhhcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            8764           799999999999999999999999998887766666653


No 39 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.92  E-value=1.7e-09  Score=106.39  Aligned_cols=104  Identities=9%  Similarity=0.061  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN---  147 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~---  147 (559)
                      ++.+...|++|...++|++|++.|.+|+.+.....+   ......+|.++|.||.++|+|++|+..|++++++.+..   
T Consensus        37 a~~y~~aa~~y~~~~~~~~A~~~y~kA~~~~~~~~~---~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~  113 (290)
T d1qqea_          37 ADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGN---EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQF  113 (290)
T ss_dssp             HHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccc
Confidence            444555555555556666666666665555333221   11233455555666666666666666666555554433   


Q ss_pred             ---HHHHHHHHHHHHH-cCCHHHHHHHHHHHHHh
Q 008613          148 ---VKALYRRGQAYKD-IGRLEEAVSDLSNAHEV  177 (559)
Q Consensus       148 ---~kal~~rG~A~~~-lg~~eeAi~dlekAl~l  177 (559)
                         ..++.++|.+|.. ++++++|+..|++++.+
T Consensus       114 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l  147 (290)
T d1qqea_         114 RRGANFKFELGEILENDLHDYAKAIDCYELAGEW  147 (290)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHH
Confidence               3455555555533 45566666666555554


No 40 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.92  E-value=1.9e-08  Score=98.51  Aligned_cols=113  Identities=14%  Similarity=-0.020  Sum_probs=97.3

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCC
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK-TKQYDECIKVGSEVLAYDA  145 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk-lg~y~eAi~~~~~AL~ldP  145 (559)
                      ....+..+.+.|++|.+.|+|++|+.+|.+++.+.+....   ......++.+++.+|.. +++|++|+..|.+++++.+
T Consensus        73 ~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~  149 (290)
T d1qqea_          73 EDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ---FRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYA  149 (290)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhccc---chhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHH
Confidence            4556888999999999999999999999999999877644   33456688999998865 6999999999999998754


Q ss_pred             C------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Q 008613          146 K------NVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDG  182 (559)
Q Consensus       146 ~------~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~  182 (559)
                      .      ...++.++|.+|..+|+|++|+..|++++.+.+.+.
T Consensus       150 ~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~~~~~  192 (290)
T d1qqea_         150 QDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNR  192 (290)
T ss_dssp             HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCT
T ss_pred             hcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhCccch
Confidence            3      256799999999999999999999999999988764


No 41 
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=98.68  E-value=2e-08  Score=99.83  Aligned_cols=128  Identities=10%  Similarity=-0.125  Sum_probs=97.1

Q ss_pred             HHHHHHHHHhHHhHHHHHHH-HHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHH-------------
Q 008613           55 TMRARIDAQMNYEFNAAKML-KKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNS-------------  120 (559)
Q Consensus        55 aa~~~l~~~~~~~~~~a~~l-k~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nl-------------  120 (559)
                      .+.......+...+.....+ ...|..+...+++.+|+..|.+++.++|.+..         +|+++             
T Consensus       127 ~a~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p~~~~---------a~~~l~~~~~~~~~~~~A  197 (334)
T d1dcea1         127 RELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYS---------SWHYRSCLLPQLHPQPDS  197 (334)
T ss_dssp             HHHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCCHH---------HHHHHHHHHHHHSCCCCS
T ss_pred             HHHHHHHHHHhhCchhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCCCCHH---------HHHHHHHHHHHhcCHHHH
Confidence            34444444444444444443 45677888888888888888888888777643         33333             


Q ss_pred             ---------------------------------------------------HHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Q 008613          121 ---------------------------------------------------MSCYLKTKQYDECIKVGSEVLAYDAKNVK  149 (559)
Q Consensus       121 ---------------------------------------------------A~~ylklg~y~eAi~~~~~AL~ldP~~~k  149 (559)
                                                                         +.++...+++.+|+..+.++++.+|.+..
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~p~~~~  277 (334)
T d1dcea1         198 GPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPLFRCELSVEKSTVLQSELESCKELQELEPENKWCLL  277 (334)
T ss_dssp             SSCCSSCHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHSCCCCSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHH
T ss_pred             HHHHHHhHHhHHHHHHHHHHHHHhcchhHHHHHHHHHHHhCcchhhHHHHHHHHHHHHhhHHHHHHHHHHHHhhCchHHH
Confidence                                                               44555556777788888888888999999


Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008613          150 ALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDA  191 (559)
Q Consensus       150 al~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a  191 (559)
                      +|+.+|.+|..+|++++|+.+|+++++++|.+...+..|...
T Consensus       278 ~~~~l~~~~~~~~~~~eA~~~~~~ai~ldP~~~~y~~~L~~~  319 (334)
T d1dcea1         278 TIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLDDLRSK  319 (334)
T ss_dssp             HHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHCcccHHHHHHHHHH
Confidence            999999999999999999999999999999998888877554


No 42 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.52  E-value=1.4e-06  Score=83.50  Aligned_cols=141  Identities=12%  Similarity=0.097  Sum_probs=111.0

Q ss_pred             HHHHHhhCCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCC
Q 008613           25 CAAEQLTHTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGI  104 (559)
Q Consensus        25 ~a~e~l~~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~  104 (559)
                      ++.-.+..+++++......++....|..             .....+..+..+|.+++..|+|++|+..|.+++.+.+..
T Consensus        18 rA~~~~~~g~~~~A~~~~~~aL~~~~~~-------------~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~   84 (366)
T d1hz4a_          18 RAQVAINDGNPDEAERLAKLALEELPPG-------------WFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH   84 (366)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTCCTT-------------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHhhCcCC-------------CcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh
Confidence            3444567778888777777766665554             122235678889999999999999999999999987766


Q ss_pred             CCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC--------CHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 008613          105 HSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAK--------NVKALYRRGQAYKDIGRLEEAVSDLSNAHE  176 (559)
Q Consensus       105 ~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~--------~~kal~~rG~A~~~lg~~eeAi~dlekAl~  176 (559)
                      ..   ......++++++.+|...+++..++..+.+++.+.+.        ....+..+|.++...|+++.|...|++++.
T Consensus        85 ~~---~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~  161 (366)
T d1hz4a_          85 DV---WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIE  161 (366)
T ss_dssp             TC---HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             cc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHH
Confidence            44   3445668889999999999999999999999876432        245778899999999999999999999999


Q ss_pred             hCCCC
Q 008613          177 VSPDD  181 (559)
Q Consensus       177 l~P~~  181 (559)
                      ..+..
T Consensus       162 ~~~~~  166 (366)
T d1hz4a_         162 VLSSY  166 (366)
T ss_dssp             HTTTS
T ss_pred             Hhhhh
Confidence            87653


No 43 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.52  E-value=1.8e-08  Score=106.89  Aligned_cols=122  Identities=14%  Similarity=-0.057  Sum_probs=77.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHH
Q 008613           77 QGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQ  156 (559)
Q Consensus        77 ~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~  156 (559)
                      .+..+...+.|..|+..|.+++.+.|.+..         .+.++|.++.+.+++++|+..+.+++.++|  ..+++++|.
T Consensus        92 ~~~l~~a~~~Y~~ai~~l~~~~~l~~~~~~---------~~~~lg~~~~~~~~~~~A~~~~~~al~~~~--~~~~~~LG~  160 (497)
T d1ya0a1          92 SLFLEAASGFYTQLLQELCTVFNVDLPCRV---------KSSQLGIISNKQTHTSAIVKPQSSSCSYIC--QHCLVHLGD  160 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHTC----------------------------------------CCHHHHHHH--HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCChhhHH---------HHHHhHHHHHhCCCHHHHHHHHHHHhCCCH--HHHHHHHHH
Confidence            345555677788899989888888877765         899999999999999999999999998876  478999999


Q ss_pred             HHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCCccchh
Q 008613          157 AYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGHHGPRGLLI  209 (559)
Q Consensus       157 A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~~~~~~~~i  209 (559)
                      ++...++|++|+.+|++|+.++|++..++..|+.+....++...+...|.+.+
T Consensus       161 l~~~~~~~~~A~~~y~~A~~l~P~~~~~~~~Lg~~~~~~~~~~~A~~~y~ral  213 (497)
T d1ya0a1         161 IARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSI  213 (497)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHcccHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999888877766555555554


No 44 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=98.51  E-value=4.7e-07  Score=80.36  Aligned_cols=114  Identities=12%  Similarity=-0.017  Sum_probs=80.8

Q ss_pred             HHhhCCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCC-
Q 008613           28 EQLTHTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHS-  106 (559)
Q Consensus        28 e~l~~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~-  106 (559)
                      ..+..+..++......++..+.++....      .........+..+.++|.+|++.|+|++|+..|.++|.+.+.... 
T Consensus        18 ~~~~~g~y~~Ai~~y~~Al~i~~~~~~~------~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~   91 (156)
T d2hr2a1          18 RQLVAGEYDEAAANCRRAMEISHTMPPE------EAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGEL   91 (156)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHTTSCTT------SCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCT
T ss_pred             HHHHcCCHHHHHHHHHHHHHhChhhhhh------hhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccccccc
Confidence            3445566666666665555443321000      000112334678899999999999999999999999998775332 


Q ss_pred             -chhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC
Q 008613          107 -SEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN  147 (559)
Q Consensus       107 -~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~  147 (559)
                       .+.......+|+++|.||..+|+|++|+.+|++++++.|+.
T Consensus        92 ~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~l~~~~  133 (156)
T d2hr2a1          92 NQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER  133 (156)
T ss_dssp             TSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC
T ss_pred             cccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhHHh
Confidence             23344566789999999999999999999999999997644


No 45 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=98.48  E-value=7e-07  Score=85.73  Aligned_cols=104  Identities=11%  Similarity=0.011  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC---
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN---  147 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~---  147 (559)
                      ++....+|.+++..|+|++|+.+|+++|.+.|....    .....+++++|.||...|+|++|+..|.+++++.+..   
T Consensus        12 ae~~~lrA~~~~~~g~~~~A~~~~~~aL~~~~~~~~----~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~   87 (366)
T d1hz4a_          12 AEFNALRAQVAINDGNPDEAERLAKLALEELPPGWF----YSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVW   87 (366)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTCH----HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcCCCc----HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcch
Confidence            555666899999999999999999999999887642    2345689999999999999999999999999876543   


Q ss_pred             ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 008613          148 ---VKALYRRGQAYKDIGRLEEAVSDLSNAHEVS  178 (559)
Q Consensus       148 ---~kal~~rG~A~~~lg~~eeAi~dlekAl~l~  178 (559)
                         ..+++.++.+|...+++..|+..+.+++.+.
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~  121 (366)
T d1hz4a_          88 HYALWSLIQQSEILFAQGFLQTAWETQEKAFQLI  121 (366)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence               5788999999999999999999999999864


No 46 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=98.41  E-value=2.7e-08  Score=97.42  Aligned_cols=91  Identities=11%  Similarity=0.022  Sum_probs=81.1

Q ss_pred             HHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Q 008613           78 GNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQA  157 (559)
Q Consensus        78 Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A  157 (559)
                      +..+++.|++++|+..|.++|+.+|.++.         ++.+++.+|+..|+|++|+..|+++++++|++..++..++.+
T Consensus         3 ~~~aL~~G~l~eAl~~l~~al~~~P~d~~---------ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~~~~~l~~l   73 (264)
T d1zbpa1           3 WKNALSEGQLQQALELLIEAIKASPKDAS---------LRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPGASQLRHL   73 (264)
T ss_dssp             HHHHTTTTCHHHHHHHHHHHHHTCTTCHH---------HHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHHCCCCHH---------HHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence            45678899999999999999999999866         999999999999999999999999999999999999999999


Q ss_pred             HHHcCCHHHHHHHHHHHHHh
Q 008613          158 YKDIGRLEEAVSDLSNAHEV  177 (559)
Q Consensus       158 ~~~lg~~eeAi~dlekAl~l  177 (559)
                      +...+..+++...+.+...+
T Consensus        74 l~a~~~~~~a~~~~~~~~~~   93 (264)
T d1zbpa1          74 VKAAQARKDFAQGAATAKVL   93 (264)
T ss_dssp             HHHHHHHHHHTTSCCCEECC
T ss_pred             HHhccccHHHHHHhhhhhcc
Confidence            98888888777666554433


No 47 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=98.37  E-value=1.6e-07  Score=91.62  Aligned_cols=131  Identities=11%  Similarity=0.043  Sum_probs=107.7

Q ss_pred             HHHhhCCChHHHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCC
Q 008613           27 AEQLTHTPPEEVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHS  106 (559)
Q Consensus        27 ~e~l~~~~pee~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~  106 (559)
                      .+.++.++.++......++....|.+                  +..+..+|..|+..|+|++|+..|+++++++|.+..
T Consensus         4 ~~aL~~G~l~eAl~~l~~al~~~P~d------------------~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~P~~~~   65 (264)
T d1zbpa1           4 KNALSEGQLQQALELLIEAIKASPKD------------------ASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP   65 (264)
T ss_dssp             HHHTTTTCHHHHHHHHHHHHHTCTTC------------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred             HHHHHCCCHHHHHHHHHHHHHHCCCC------------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCcHH
Confidence            34556677777777777667777777                  999999999999999999999999999999888754


Q ss_pred             chhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHH-HcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Q 008613          107 SEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVL-AYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTI  184 (559)
Q Consensus       107 ~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL-~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a  184 (559)
                               .+.+++.++...+.++++...+.+.. ..+|.....++.++.++...|++++|+..++++.++.|+.+..
T Consensus        66 ---------~~~~l~~ll~a~~~~~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~~p~~~~~  135 (264)
T d1zbpa1          66 ---------GASQLRHLVKAAQARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEELRQEKGFL  135 (264)
T ss_dssp             ---------HHHHHHHHHHHHHHHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCCCEE
T ss_pred             ---------HHHHHHHHHHhccccHHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCCCCCcc
Confidence                     77888888887777777776655433 3457778889999999999999999999999999999987654


No 48 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.35  E-value=2.1e-06  Score=73.70  Aligned_cols=84  Identities=11%  Similarity=0.127  Sum_probs=74.4

Q ss_pred             HHHHHHHHHHHHHcC---CHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008613          114 LACSLNSMSCYLKTK---QYDECIKVGSEVLAYDAKN-VKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLR  189 (559)
Q Consensus       114 ~~~~~nlA~~ylklg---~y~eAi~~~~~AL~ldP~~-~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~  189 (559)
                      ....|+.|.|+.+..   +.+++|..++.+++.+|.+ ..++|.+|.+|..+|+|++|...++++|+++|+|..+.....
T Consensus        35 ~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~  114 (124)
T d2pqrb1          35 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS  114 (124)
T ss_dssp             HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred             cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHH
Confidence            347788888888765   4578999999999999977 479999999999999999999999999999999999999888


Q ss_pred             HHHHHHHh
Q 008613          190 DAKEILMK  197 (559)
Q Consensus       190 ~a~~~l~~  197 (559)
                      .+.+++.+
T Consensus       115 ~Ie~~~~k  122 (124)
T d2pqrb1         115 MVEDKIQK  122 (124)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHhc
Confidence            88887754


No 49 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.29  E-value=4.3e-06  Score=71.75  Aligned_cols=101  Identities=8%  Similarity=0.022  Sum_probs=76.2

Q ss_pred             cHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH
Q 008613           50 PEEIATMRARIDAQMNYEFNAAKMLKKQGNELYSEGRF---SNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK  126 (559)
Q Consensus        50 pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k~g~y---~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk  126 (559)
                      ++++....++....++..+. ++..++.|.++.+..+.   .++|..+.+++..+|.+.        ..|+|++|.+|.+
T Consensus        15 ~~el~~~~~q~~~e~~~~~s-~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~p~~~--------rd~lY~Lav~yyk   85 (124)
T d2pqrb1          15 PQQLEILRQQVVSEGGPTAT-IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRR--------RECLYYLTIGCYK   85 (124)
T ss_dssp             HHHHHHHHHHHHHTTGGGSC-HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGH--------HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCC-cchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcCchhH--------HHHHHHHHHHHHH
Confidence            34444444444444332222 67888888888877554   689999999998866542        3599999999999


Q ss_pred             cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Q 008613          127 TKQYDECIKVGSEVLAYDAKNVKALYRRGQAYK  159 (559)
Q Consensus       127 lg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~  159 (559)
                      +|+|++|..+++++|+++|+|..+...+-.+..
T Consensus        86 lgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie~  118 (124)
T d2pqrb1          86 LGEYSMAKRYVDTLFEHERNNKQVGALKSMVED  118 (124)
T ss_dssp             HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HhhHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Confidence            999999999999999999999988766655543


No 50 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=98.27  E-value=1.3e-06  Score=79.94  Aligned_cols=100  Identities=12%  Similarity=0.036  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC----------------------HHHHHHHHHHHHHcCCHHHHHHH
Q 008613          113 LLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKN----------------------VKALYRRGQAYKDIGRLEEAVSD  170 (559)
Q Consensus       113 ~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~----------------------~kal~~rG~A~~~lg~~eeAi~d  170 (559)
                      ....++++|..+...|++++|+..|.+||.+.+..                      ..++.+++.++..+|+|++|+.+
T Consensus        10 ~f~~~~~~g~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~~   89 (179)
T d2ff4a2          10 RFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAE   89 (179)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHH
Confidence            34578899999999999999999999999987643                      26789999999999999999999


Q ss_pred             HHHHHHhCCCCHHHHHHHHHHHHHHHhhcCCCCCccchhhhh
Q 008613          171 LSNAHEVSPDDGTIADVLRDAKEILMKEDGHHGPRGLLIEEI  212 (559)
Q Consensus       171 lekAl~l~P~~~~a~~~L~~a~~~l~~~~~~~~~~~~~i~e~  212 (559)
                      +++++.++|.+..++..+..+...+++..++...|+......
T Consensus        90 ~~~al~~~P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L  131 (179)
T d2ff4a2          90 LEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTL  131 (179)
T ss_dssp             HHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence            999999999999999999999999988887777666654433


No 51 
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.18  E-value=5.5e-06  Score=81.07  Aligned_cols=125  Identities=6%  Similarity=-0.155  Sum_probs=103.5

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Q 008613           69 NAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNV  148 (559)
Q Consensus        69 ~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~  148 (559)
                      .....+...+..+...|++++|...|.++|...|.+..        .+|...+.+..+.++++.|...|.++++..|...
T Consensus        97 ~~~~l~~~ya~~~~~~~~~~~a~~i~~~~l~~~~~~~~--------~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~  168 (308)
T d2onda1          97 KNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPT--------LVYIQYMKFARRAEGIKSGRMIFKKAREDARTRH  168 (308)
T ss_dssp             TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTH--------HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCT
T ss_pred             CCHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCChH--------HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcH
Confidence            34556778888999999999999999999998777642        3678888899999999999999999999999999


Q ss_pred             HHHHHHHHHHH-HcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCC
Q 008613          149 KALYRRGQAYK-DIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGH  201 (559)
Q Consensus       149 kal~~rG~A~~-~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~  201 (559)
                      ..|...+.... ..++.+.|...|++++..+|++..++..+.......++...+
T Consensus       169 ~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~w~~y~~~~~~~g~~~~a  222 (308)
T d2onda1         169 HVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNT  222 (308)
T ss_dssp             HHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHcCChHHH
Confidence            98888887654 468899999999999999999998888877776665544433


No 52 
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.08  E-value=1.6e-05  Score=77.58  Aligned_cols=116  Identities=6%  Similarity=-0.097  Sum_probs=98.0

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHcCCCCHHH
Q 008613           72 KMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK-TKQYDECIKVGSEVLAYDAKNVKA  150 (559)
Q Consensus        72 ~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk-lg~y~eAi~~~~~AL~ldP~~~ka  150 (559)
                      ..+...++...+.++++.|...|.+++...|....         .|...+..... .++++.|...|+++++.+|+++..
T Consensus       135 ~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~~~~~---------~~~~~a~~e~~~~~~~~~a~~i~e~~l~~~p~~~~~  205 (308)
T d2onda1         135 LVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHH---------VYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEY  205 (308)
T ss_dssp             HHHHHHHHHHHHHHCHHHHHHHHHHHHTSTTCCTH---------HHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCcHH---------HHHHHHHHHHHhccCHHHHHHHHHHHHHhhhhhHHH
Confidence            45778888999999999999999999999888765         67777766544 589999999999999999999999


Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC----HHHHHHHHHHHHHHH
Q 008613          151 LYRRGQAYKDIGRLEEAVSDLSNAHEVSPDD----GTIADVLRDAKEILM  196 (559)
Q Consensus       151 l~~rG~A~~~lg~~eeAi~dlekAl~l~P~~----~~a~~~L~~a~~~l~  196 (559)
                      +...+..+...|+++.|...|++++...|.+    ..++......+...+
T Consensus       206 w~~y~~~~~~~g~~~~aR~~fe~ai~~~~~~~~~~~~iw~~~~~fE~~~G  255 (308)
T d2onda1         206 VLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIG  255 (308)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999999999999988754    346665555554444


No 53 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=97.69  E-value=0.00021  Score=67.25  Aligned_cols=106  Identities=16%  Similarity=0.113  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCC
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK----TKQYDECIKVGSEVLAYDAK  146 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk----lg~y~eAi~~~~~AL~ldP~  146 (559)
                      ++.+..+|..++.+++|.+|+++|.++.+.  .+.         .+++++|.+|..    .+++..|+.++..+...  .
T Consensus         2 p~~~~~lG~~~~~~~d~~~A~~~~~kAa~~--g~~---------~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~--~   68 (265)
T d1ouva_           2 PKELVGLGAKSYKEKDFTQAKKYFEKACDL--KEN---------SGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL--N   68 (265)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT--TCH---------HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--T
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHC--CCH---------HHHHHHHHHHHcCCCcchhHHHHHHhhcccccc--c
Confidence            678899999999999999999999999875  332         389999999998    67999999999998854  5


Q ss_pred             CHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Q 008613          147 NVKALYRRGQAYKD----IGRLEEAVSDLSNAHEVSPDDGTIADVLRDA  191 (559)
Q Consensus       147 ~~kal~~rG~A~~~----lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a  191 (559)
                      ++.+.+.+|..+..    ..+++.|+..|+++....+  ..+...+...
T Consensus        69 ~~~a~~~l~~~~~~~~~~~~~~~~a~~~~~~a~~~g~--~~a~~~l~~~  115 (265)
T d1ouva_          69 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKY--AEGCASLGGI  115 (265)
T ss_dssp             CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC--HHHHHHHHHH
T ss_pred             ccchhhccccccccccccchhhHHHHHHHhhhhhhhh--hhHHHhhccc
Confidence            88899999998876    5688999999999987644  3444444433


No 54 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=97.26  E-value=0.0012  Score=56.03  Aligned_cols=83  Identities=12%  Similarity=-0.007  Sum_probs=69.8

Q ss_pred             HcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Q 008613           83 SEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK----TKQYDECIKVGSEVLAYDAKNVKALYRRGQAY  158 (559)
Q Consensus        83 k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk----lg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~  158 (559)
                      ...++++|+..|.++.+.  .++         .+++++|.+|+.    ..++++|+++|.++.+.  .++.+.+++|..|
T Consensus        35 ~~~~~~~a~~~~~~aa~~--g~~---------~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y  101 (133)
T d1klxa_          35 SQINKQKLFQYLSKACEL--NSG---------NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--NDQDGCLILGYKQ  101 (133)
T ss_dssp             TTSCHHHHHHHHHHHHHT--TCH---------HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHhhhhcc--cch---------hhhhhHHHhhhhccccchhhHHHHHHHhhhhcc--CcchHHHHHHHHH
Confidence            456889999999999875  332         378899999987    46799999999999875  6899999999999


Q ss_pred             HH----cCCHHHHHHHHHHHHHhC
Q 008613          159 KD----IGRLEEAVSDLSNAHEVS  178 (559)
Q Consensus       159 ~~----lg~~eeAi~dlekAl~l~  178 (559)
                      ..    ..++++|+.+|+++.++.
T Consensus       102 ~~G~gv~~d~~~A~~~~~~Aa~~G  125 (133)
T d1klxa_         102 YAGKGVVKNEKQAVKTFEKACRLG  125 (133)
T ss_dssp             HHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred             HcCCccCCCHHHHHHHHHHHHHCC
Confidence            87    568999999999998864


No 55 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=97.25  E-value=0.00089  Score=62.69  Aligned_cols=104  Identities=15%  Similarity=0.156  Sum_probs=71.0

Q ss_pred             HHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 008613           71 AKMLKKQGNELYS----EGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK----TKQYDECIKVGSEVLA  142 (559)
Q Consensus        71 a~~lk~~Gn~~~k----~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk----lg~y~eAi~~~~~AL~  142 (559)
                      ...+..+|..+..    ..+...+...|.++.+.  .+         ..+++++|.+|..    .+++++|+.+|.++.+
T Consensus       142 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~--g~---------~~A~~~lg~~y~~g~~~~~d~~~A~~~~~~aa~  210 (265)
T d1ouva_         142 GDGCTILGSLYDAGRGTPKDLKKALASYDKACDL--KD---------SPGCFNAGNMYHHGEGATKNFKEALARYSKACE  210 (265)
T ss_dssp             HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TC---------HHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred             cchhhhhhhhhccCCCcccccccchhhhhccccc--cc---------cccccchhhhcccCcccccchhhhhhhHhhhhc
Confidence            3345556666664    44555666666666543  22         2378888888887    6688888888888887


Q ss_pred             cCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Q 008613          143 YDAKNVKALYRRGQAYKD----IGRLEEAVSDLSNAHEVSPDDGTIADVLR  189 (559)
Q Consensus       143 ldP~~~kal~~rG~A~~~----lg~~eeAi~dlekAl~l~P~~~~a~~~L~  189 (559)
                      .  +++.+++++|.+|..    .+++++|+.+|++|..+.  +..+...|.
T Consensus       211 ~--g~~~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g--~~~A~~~l~  257 (265)
T d1ouva_         211 L--ENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG--AKGACDILK  257 (265)
T ss_dssp             T--TCHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT--CHHHHHHHH
T ss_pred             c--cCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCc--CHHHHHHHH
Confidence            6  478888888888875    347888888888888774  334444443


No 56 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=96.99  E-value=0.0034  Score=53.01  Aligned_cols=93  Identities=16%  Similarity=0.057  Sum_probs=75.5

Q ss_pred             CCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH----
Q 008613           85 GRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKD----  160 (559)
Q Consensus        85 g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~----  160 (559)
                      .++++|+.+|.++.+..  ++.         ++++++..  ...++++|+..+.++.+.  +++.+++++|..|..    
T Consensus         7 kd~~~A~~~~~kaa~~g--~~~---------a~~~l~~~--~~~~~~~a~~~~~~aa~~--g~~~a~~~Lg~~y~~g~~~   71 (133)
T d1klxa_           7 KDLKKAIQYYVKACELN--EMF---------GCLSLVSN--SQINKQKLFQYLSKACEL--NSGNGCRFLGDFYENGKYV   71 (133)
T ss_dssp             HHHHHHHHHHHHHHHTT--CTT---------HHHHHHTC--TTSCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHCSSS
T ss_pred             cCHHHHHHHHHHHHHCC--Chh---------hhhhhccc--cccCHHHHHHHHhhhhcc--cchhhhhhHHHhhhhcccc
Confidence            57899999999998864  333         66677643  457899999999999865  689999999999987    


Q ss_pred             cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Q 008613          161 IGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEI  194 (559)
Q Consensus       161 lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~  194 (559)
                      ..++++|+.+|+++.+.  .++.+...|+.+...
T Consensus        72 ~~d~~~A~~~~~~aa~~--g~~~a~~~Lg~~y~~  103 (133)
T d1klxa_          72 KKDLRKAAQYYSKACGL--NDQDGCLILGYKQYA  103 (133)
T ss_dssp             CCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHhhhhcc--CcchHHHHHHHHHHc
Confidence            56799999999999876  567788888777544


No 57 
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=80.76  E-value=3.5  Score=40.61  Aligned_cols=91  Identities=12%  Similarity=-0.080  Sum_probs=61.2

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHH
Q 008613           76 KQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRG  155 (559)
Q Consensus        76 ~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG  155 (559)
                      ..+..++..+....|...+..........          .....++...+..+++..++..+...-.-.....+..|++|
T Consensus       257 ~~a~~~~~~~~~~~a~~~~~~~~~~~~~~----------~~~~w~~~~al~~~~~~~~~~~~~~l~~~~~~~~r~~YW~g  326 (450)
T d1qsaa1         257 IVAWRLMGNDVTDEQAKWRDDAIMRSQST----------SLIERRVRMALGTGDRRGLNTWLARLPMEAKEKDEWRYWQA  326 (450)
T ss_dssp             HHHHTSCSTTCCHHHHHHHHHHHHTCCCH----------HHHHHHHHHHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHH
T ss_pred             HHHHHHHHcCchHHHHHHHHhhcccccch----------HHHHHHHHHHHHcCChHHHHHHHHhcCcccccHHHHHHHHH
Confidence            33444555666777777776665432211          11222333345678999988887765433334588999999


Q ss_pred             HHHHHcCCHHHHHHHHHHHHH
Q 008613          156 QAYKDIGRLEEAVSDLSNAHE  176 (559)
Q Consensus       156 ~A~~~lg~~eeAi~dlekAl~  176 (559)
                      .++..+|+.++|...|+.+..
T Consensus       327 Ra~~~~G~~~~A~~~~~~~a~  347 (450)
T d1qsaa1         327 DLLLERGREAEAKEILHQLMQ  347 (450)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHT
T ss_pred             HHHHHcCChhhHHHHHHHHhc
Confidence            999999999999999998864


No 58 
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=78.71  E-value=1.3  Score=34.55  Aligned_cols=32  Identities=31%  Similarity=0.297  Sum_probs=27.4

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 008613           69 NAAKMLKKQGNELYSEGRFSNALQKYLLAKKN  100 (559)
Q Consensus        69 ~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l  100 (559)
                      ..+..+...+..+-..|+|.+|+.+|.+++++
T Consensus        13 ~~A~~l~~~Av~~D~~g~y~eA~~~Y~~aie~   44 (93)
T d1wfda_          13 TAAVAVLKRAVELDAESRYQQALVCYQEGIDM   44 (93)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            34677788899999999999999999999875


No 59 
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2,  NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.23  E-value=1.9  Score=32.70  Aligned_cols=31  Identities=16%  Similarity=0.265  Sum_probs=25.7

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKN  100 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l  100 (559)
                      .+..+-.+++.+.+.|+|++||+++.+|..+
T Consensus         7 ~AH~~~RrAer~l~~~rydeAIech~kA~~y   37 (83)
T d2crba1           7 LAHQQSRRADRLLAAGKYEEAISCHRKATTY   37 (83)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            3555666889999999999999999888764


No 60 
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=75.15  E-value=3.5  Score=39.61  Aligned_cols=100  Identities=16%  Similarity=0.093  Sum_probs=56.3

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHH-------------H
Q 008613           76 KQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVL-------------A  142 (559)
Q Consensus        76 ~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL-------------~  142 (559)
                      ..|..+++.|.|..|+.+|+..-                 -|-.+..||.++++|+.|++...++-             +
T Consensus        19 ~i~~~c~~~~lye~A~~lY~~~~-----------------d~~rl~~~~v~l~~~~~avd~~~k~~~~~~~k~~~~~l~~   81 (336)
T d1b89a_          19 QVGDRCYDEKMYDAAKLLYNNVS-----------------NFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVD   81 (336)
T ss_dssp             ----------CTTTHHHHHHHTT-----------------CHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHhCC-----------------CHHHHHHHHHhhccHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence            46777777788888888776421                 13344455556666665555444331             0


Q ss_pred             c------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Q 008613          143 Y------------DAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAK  192 (559)
Q Consensus       143 l------------dP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~  192 (559)
                      .            .-.++.-+...-..|...|.+++.+..++.++.+++.+..+...+..+.
T Consensus        82 ~~e~~la~i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~~~~~~~~~~~L~~ly  143 (336)
T d1b89a_          82 GKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILY  143 (336)
T ss_dssp             TTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHhhcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcCCccchHHHHHHHHHH
Confidence            0            1123444455666777888999999999998888888887776666654


No 61 
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2,  NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.45  E-value=2.2  Score=32.35  Aligned_cols=39  Identities=23%  Similarity=0.238  Sum_probs=21.1

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHH-------HHhCCCCHHHHHHH
Q 008613          149 KALYRRGQAYKDIGRLEEAVSDLSNA-------HEVSPDDGTIADVL  188 (559)
Q Consensus       149 kal~~rG~A~~~lg~~eeAi~dlekA-------l~l~P~~~~a~~~L  188 (559)
                      ..+-|++..+...|+|+|||++++++       +++ +.++.+..-|
T Consensus         9 H~~~RrAer~l~~~rydeAIech~kA~~yl~eA~kl-t~s~~~l~SL   54 (83)
T d2crba1           9 HQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKL-TESEQAHLSL   54 (83)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT-CCCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhC-CCcHHHHHHH
Confidence            44555556666666666666555554       444 5555554443


No 62 
>d1wfda_ a.7.14.1 (A:) Hypothetical protein 1500032H18Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=65.78  E-value=14  Score=28.24  Aligned_cols=24  Identities=13%  Similarity=0.117  Sum_probs=13.3

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHHHH
Q 008613          118 LNSMSCYLKTKQYDECIKVGSEVL  141 (559)
Q Consensus       118 ~nlA~~ylklg~y~eAi~~~~~AL  141 (559)
                      ...|.-+-..|+|++|+.+|..+|
T Consensus        19 ~~~Av~~D~~g~y~eA~~~Y~~ai   42 (93)
T d1wfda_          19 LKRAVELDAESRYQQALVCYQEGI   42 (93)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHH
Confidence            344444445566666666665554


No 63 
>d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.89  E-value=2.7  Score=31.37  Aligned_cols=33  Identities=24%  Similarity=0.268  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 008613           68 FNAAKMLKKQGNELYSEGRFSNALQKYLLAKKN  100 (559)
Q Consensus        68 ~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l  100 (559)
                      +..+..+...+..+=..|+|.+|+.+|.+++++
T Consensus         8 l~~A~~l~~~Av~~D~~~~y~~A~~~Y~~a~~~   40 (77)
T d1wr0a1           8 LQKAIDLASKAAQEDKAGNYEEALQLYQHAVQY   40 (77)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            344666777888888899999999999888875


No 64 
>d3ckca1 a.118.8.6 (A:42-551) Starch utilization system protein SusD {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=61.40  E-value=13  Score=36.78  Aligned_cols=88  Identities=14%  Similarity=0.068  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHc------------------------CCHHHHHHHHHHHHHcC
Q 008613           89 NALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKT------------------------KQYDECIKVGSEVLAYD  144 (559)
Q Consensus        89 eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylkl------------------------g~y~eAi~~~~~AL~ld  144 (559)
                      .+|.....+|+..+...+.+...++..+++-||.+|+.+                        .-|+-.+++++.|+.+-
T Consensus        87 ~~I~~aN~~i~~i~~~~~~~~~~~~aEA~flRA~~yf~L~~~yG~VPl~~~~~~~~~~r~s~~ev~~~I~~dL~~A~~~L  166 (510)
T d3ckca1          87 YDITQYNFFLDQTEGMTDAETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEADM  166 (510)
T ss_dssp             HHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHHHHHHHSEEEECSSCSSSCCEEEEHHHHHHHHHHHHHHHGGGS
T ss_pred             HHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCceEEEeccccccCCcCCHHHHHHHHHHHHHHHHhcc
Confidence            356666666666665555555567777888888888775                        23566778888888765


Q ss_pred             CCC----------HHHHHHHHHHHHHcC------CHHHHHHHHHHHHH
Q 008613          145 AKN----------VKALYRRGQAYKDIG------RLEEAVSDLSNAHE  176 (559)
Q Consensus       145 P~~----------~kal~~rG~A~~~lg------~~eeAi~dlekAl~  176 (559)
                      |..          ..|+..++++|+..+      +|++|+..+++++.
T Consensus       167 p~~~~~~~gR~tk~aA~allarvyL~~~~~~~~~~~~~A~~~a~~vi~  214 (510)
T d3ckca1         167 YEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIG  214 (510)
T ss_dssp             CCTTCSCTTSCCHHHHHHHHHHHHHTHHHHHSSCCHHHHHHHHHHHHT
T ss_pred             cCcccccCCcccHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHhh
Confidence            532          346777777777654      88888888887764


No 65 
>d2ijqa1 a.246.2.1 (A:14-158) Hypothetical protein rrnAC1037 {Haloarcula marismortui [TaxId: 2238]}
Probab=58.76  E-value=29  Score=28.77  Aligned_cols=73  Identities=15%  Similarity=0.120  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHH-HHHcCCHHHHHHHHHHHHHc
Q 008613           70 AAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSC-YLKTKQYDECIKVGSEVLAY  143 (559)
Q Consensus        70 ~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~-ylklg~y~eAi~~~~~AL~l  143 (559)
                      ..+.....|..+|..|+|-+|=+.+...+...+... .+..-+...+....|.. +++.|++..|...+.+++..
T Consensus        16 t~~~a~~~Gi~lfN~g~y~eaHE~lEe~W~~~~~~~-~er~~~QGLIQ~Aaa~~hh~~~gN~~GA~~l~~~al~~   89 (145)
T d2ijqa1          16 TLRRAVVHGVRLYNSGEFHESHDCFEDEWYNYGRGN-TESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY   89 (145)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCC-hHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            355667799999999999999999999987544321 11112222333333334 36788899888888888754


No 66 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=53.54  E-value=31  Score=28.36  Aligned_cols=62  Identities=19%  Similarity=0.204  Sum_probs=47.4

Q ss_pred             HHHHHHHHHH-HcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 008613          116 CSLNSMSCYL-KTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEEAVSDLSNAHEV  177 (559)
Q Consensus       116 ~~~nlA~~yl-klg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~eeAi~dlekAl~l  177 (559)
                      -|+++|.-++ +.++-+.--+.|+..++-.--++..+...|.||..+|...+|-..+.+|.+.
T Consensus        87 e~vdlALd~lv~~~kkd~Ld~i~~~l~kn~~i~~~~llkia~A~kkig~~re~nell~~ACe~  149 (161)
T d1wy6a1          87 EHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKK  149 (161)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHH
Confidence            3566665444 4555555556677778877778999999999999999999999999999874


No 67 
>d1qsaa1 a.118.5.1 (A:1-450) 70 KDa soluble lytic transglycosylase (SLT70), superhelical domain {Escherichia coli [TaxId: 562]}
Probab=49.91  E-value=78  Score=30.07  Aligned_cols=121  Identities=14%  Similarity=0.039  Sum_probs=65.6

Q ss_pred             HHHHHHHHHhcCCHHHHHHHHHHhhCCChH---HHHHHHHHHHccCcHHHHHHHHHHHHHhHHhHHHHHHHHHHHHHHHH
Q 008613            7 LMRIATENMKNMRPEDLKCAAEQLTHTPPE---EVAEIGEKLANASPEEIATMRARIDAQMNYEFNAAKMLKKQGNELYS   83 (559)
Q Consensus         7 ~l~~A~e~mk~m~pedl~~a~e~l~~~~pe---e~~~~~~~~~~~~pee~~aa~~~l~~~~~~~~~~a~~lk~~Gn~~~k   83 (559)
                      .+..|.+.+++....++.+....|++..--   ++..+...+...++.++....    ......+......+..-+.+.+
T Consensus         9 ~y~~a~~a~~~~~~~~~~~~~~~L~dypL~pYl~~~~l~~~~~~~~~~~i~~Fl----~~~p~~P~~~~lr~~~l~~L~~   84 (450)
T d1qsaa1           9 RYAQIKQAWDNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFV----RANPTLPPARTLQSRFVNELAR   84 (450)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHSGGGTTSTTHHHHHHHHHHHTGGGCCHHHHHHHH----HHCTTCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCHHHHHHHHhhhcCCCCHHHHHHHHHHhccccCCHHHHHHHH----HHCCCChhHHHHHHHHHHHHHh
Confidence            456677777777777777777777654322   222222223333444422221    1112222223333344556777


Q ss_pred             cCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 008613           84 EGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYD  144 (559)
Q Consensus        84 ~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ld  144 (559)
                      .+++.+.+.+|       +..|.      ...+.|..+.+.+..|+-.+|+..+..+....
T Consensus        85 ~~~w~~~~~~~-------~~~p~------~~~~~c~~~~A~~~~g~~~~a~~~~~~lW~~~  132 (450)
T d1qsaa1          85 REDWRGLLAFS-------PEKPG------TTEAQCNYYYAKWNTGQSEEAWQGAKELWLTG  132 (450)
T ss_dssp             TTCHHHHHHHC-------CSCCS------SHHHHHHHHHHHHHTTCHHHHHHHHHHHHSCS
T ss_pred             ccCHHHHHHhc-------cCCCC------CHHHHHHHHHHHHHcCChHHHHHHHHHHHhcC
Confidence            78876655444       33332      12244566777888999999988877776543


No 68 
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=44.97  E-value=19  Score=36.13  Aligned_cols=54  Identities=19%  Similarity=0.164  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHhhcCC
Q 008613          148 VKALYRRGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVLRDAKEILMKEDGH  201 (559)
Q Consensus       148 ~kal~~rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L~~a~~~l~~~~~~  201 (559)
                      ...+..++...+..|+|..|+..+..++..+|+|.+++..+..+.+.++...+.
T Consensus       430 ~~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~  483 (505)
T d2cfua2         430 AERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAEN  483 (505)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCSS
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCcC
Confidence            566677777777888888888888888888888888888888888888766543


No 69 
>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=43.77  E-value=16  Score=36.66  Aligned_cols=52  Identities=15%  Similarity=0.154  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHH
Q 008613          115 ACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEE  166 (559)
Q Consensus       115 ~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~ee  166 (559)
                      .....+|..++..|+|.-|++.++.++..+|+|..+...++.+|..+|.-.+
T Consensus       431 ~~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~  482 (505)
T d2cfua2         431 ERLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQAE  482 (505)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhCc
Confidence            3456788888899999999999999999999999999999999999886544


No 70 
>d1om2a_ a.23.4.1 (A:) Mitochondrial import receptor subunit Tom20 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=39.48  E-value=14  Score=28.67  Aligned_cols=29  Identities=17%  Similarity=0.252  Sum_probs=25.6

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhcCC
Q 008613           75 KKQGNELYSEGRFSNALQKYLLAKKNLQG  103 (559)
Q Consensus        75 k~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~  103 (559)
                      ..+|..++..|++++++.+|.+||.+++.
T Consensus        24 V~lGE~Ll~~G~~~~g~~h~~nAi~Vc~q   52 (95)
T d1om2a_          24 IQLGEELLAQGDYEKGVDHLTNAIAVCGQ   52 (95)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHcCC
Confidence            45899999999999999999999998665


No 71 
>d1wr0a1 a.7.14.1 (A:5-81) Vacuolar sorting protein 4b (VPS4B, SKD1 protein) {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.82  E-value=25  Score=25.67  Aligned_cols=15  Identities=20%  Similarity=0.463  Sum_probs=6.8

Q ss_pred             HcCCHHHHHHHHHHH
Q 008613          126 KTKQYDECIKVGSEV  140 (559)
Q Consensus       126 klg~y~eAi~~~~~A  140 (559)
                      +.|+|++|+.+|..+
T Consensus        23 ~~~~y~~A~~~Y~~a   37 (77)
T d1wr0a1          23 KAGNYEEALQLYQHA   37 (77)
T ss_dssp             HTTCCSSHHHHHHHH
T ss_pred             HcCCHHHHHHHHHHH
Confidence            344444444444433


No 72 
>d1om2a_ a.23.4.1 (A:) Mitochondrial import receptor subunit Tom20 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=38.14  E-value=18  Score=27.96  Aligned_cols=35  Identities=29%  Similarity=0.365  Sum_probs=22.4

Q ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHH
Q 008613          154 RGQAYKDIGRLEEAVSDLSNAHEVSPDDGTIADVL  188 (559)
Q Consensus       154 rG~A~~~lg~~eeAi~dlekAl~l~P~~~~a~~~L  188 (559)
                      +|..+...|++++++.+|-+|+.++|.-......+
T Consensus        26 lGE~Ll~~G~~~~g~~h~~nAi~Vc~qP~~LL~il   60 (95)
T d1om2a_          26 LGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVL   60 (95)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence            56666666777777777777777776654444433


No 73 
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.51  E-value=12  Score=26.01  Aligned_cols=19  Identities=26%  Similarity=0.578  Sum_probs=16.4

Q ss_pred             HHHHHHhcCCCHHHHHHHH
Q 008613          358 KTASDVMSKMSSEDLQKMF  376 (559)
Q Consensus       358 ~~~~~mM~nm~pe~m~~m~  376 (559)
                      +..++||++.|||++.+++
T Consensus        36 ~~vA~~ikgKt~eeiR~~f   54 (55)
T d1fs1b1          36 KTVANMIKGKTPEEIRKTF   54 (55)
T ss_dssp             HHHHHHHTTCCHHHHHHHT
T ss_pred             HHHHHHHcCCCHHHHHHHh
Confidence            5789999999999998764


No 74 
>d2cwya1 a.246.2.1 (A:1-94) Hypothetical protein TTHA0068 {Thermus thermophilus [TaxId: 274]}
Probab=30.63  E-value=32  Score=26.26  Aligned_cols=28  Identities=11%  Similarity=0.009  Sum_probs=24.1

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhcC
Q 008613           75 KKQGNELYSEGRFSNALQKYLLAKKNLQ  102 (559)
Q Consensus        75 k~~Gn~~~k~g~y~eAi~~Y~kAL~l~p  102 (559)
                      +..|..+|..|+|-+|=+.+.......+
T Consensus         5 ~~~gi~lfn~g~y~eaHE~lE~~W~~~~   32 (94)
T d2cwya1           5 WEEVLGLWRAGRYYEVHEVLEPYWLKAT   32 (94)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHhhCC
Confidence            4578999999999999999999987643


No 75 
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.84  E-value=76  Score=27.30  Aligned_cols=85  Identities=15%  Similarity=0.074  Sum_probs=40.0

Q ss_pred             HHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHHH
Q 008613           87 FSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLEE  166 (559)
Q Consensus        87 y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~ee  166 (559)
                      -..|+..|.+||...|..+.     -...|+-.+  +....++-.-.|..|..+...+|..+  -..+..++..|...++
T Consensus        96 rr~a~~~y~~al~~~ppn~~-----~Vl~aLk~y--ira~~kDR~Htl~hf~Hl~~~dp~~A--~~~r~~vl~hL~~Id~  166 (192)
T d1rw6a_          96 RRLALENYITALQAVPPRPR-----HVFNMLKKY--VRAEQKDRQHTLKHFEHVRMVDPKKA--AQIRSQVMTHLRVIYE  166 (192)
T ss_dssp             HHHHHHHHHHHHTCSSCCHH-----HHHHHHHHH--HHHHHHHHHHHHHHHHTCCSCCSSHH--HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCHH-----HHHHHHHHH--HHHHHHhHHhHHHHHHHHHcCCHHHH--HHccHHHHHHHHHHHH
Confidence            35677888888877666543     011111111  11122333445556666655555432  2334555555555555


Q ss_pred             HHHHHHHHHHhCCC
Q 008613          167 AVSDLSNAHEVSPD  180 (559)
Q Consensus       167 Ai~dlekAl~l~P~  180 (559)
                      .+..--..|...|+
T Consensus       167 r~NqSL~lL~~~P~  180 (192)
T d1rw6a_         167 RMNQSLSLLYNVPA  180 (192)
T ss_dssp             HHHHTTSSGGGSSC
T ss_pred             HHHHHHHHHHHChH
Confidence            54443333333443


No 76 
>d1rw6a_ a.47.4.1 (A:) CAPPD, an extracellular domain of amyloid beta A4 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.66  E-value=1.7e+02  Score=24.99  Aligned_cols=85  Identities=9%  Similarity=0.123  Sum_probs=57.0

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCC-----HHHHHH
Q 008613          115 ACSLNSMSCYLKTKQYDECIKVGSEVLAYDAKNVKALYRRGQAYKDIGRLE--EAVSDLSNAHEVSPDD-----GTIADV  187 (559)
Q Consensus       115 ~~~~nlA~~ylklg~y~eAi~~~~~AL~ldP~~~kal~~rG~A~~~lg~~e--eAi~dlekAl~l~P~~-----~~a~~~  187 (559)
                      .++..+-.+.+. .+-..|+.+|..+|...|.++.-.+..-..|...-+.+  -.+..|+-+...+|..     +.+...
T Consensus        82 ~~H~~rV~a~ln-~rrr~a~~~y~~al~~~ppn~~~Vl~aLk~yira~~kDR~Htl~hf~Hl~~~dp~~A~~~r~~vl~h  160 (192)
T d1rw6a_          82 ETHMARVEAMLN-DRRRLALENYITALQAVPPRPRHVFNMLKKYVRAEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTH  160 (192)
T ss_dssp             HHHHHHHHHHHH-HHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSCCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHcCCHHHHHHccHHHHHH
Confidence            344444444443 34578999999999999999876655555554443332  3778888888888875     346677


Q ss_pred             HHHHHHHHHhhcC
Q 008613          188 LRDAKEILMKEDG  200 (559)
Q Consensus       188 L~~a~~~l~~~~~  200 (559)
                      |..+..++.+.-.
T Consensus       161 L~~Id~r~NqSL~  173 (192)
T d1rw6a_         161 LRVIYERMNQSLS  173 (192)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHH
Confidence            7777777776544


No 77 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=28.13  E-value=60  Score=26.55  Aligned_cols=55  Identities=9%  Similarity=-0.076  Sum_probs=37.8

Q ss_pred             HHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Q 008613           81 LYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEVLAYD  144 (559)
Q Consensus        81 ~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~AL~ld  144 (559)
                      +.++|+-+.--+.|...++...-.         ..++..+|.+|.+.|.-.++-+...+|.+..
T Consensus        96 lv~~~kkd~Ld~i~~~l~kn~~i~---------~~~llkia~A~kkig~~re~nell~~ACe~G  150 (161)
T d1wy6a1          96 LVIQGKRDKLEEIGREILKNNEVS---------ASILVAIANALRRVGDERDATTLLIEACKKG  150 (161)
T ss_dssp             HHHTTCHHHHHHHHHHHC--CCSC---------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred             HHHhccHHHHHHHHHHHHhcCCCC---------HHHHHHHHHHHHHhcchhhHHHHHHHHHHHh
Confidence            344455444445566656533333         3488899999999999999999999988653


No 78 
>d2o8pa1 a.118.7.1 (A:8-227) 14-3-3 domain containing protein cgd7_2470 {Cryptosporidium parvum [TaxId: 5807]}
Probab=26.99  E-value=84  Score=27.53  Aligned_cols=71  Identities=10%  Similarity=-0.093  Sum_probs=49.1

Q ss_pred             HHHHHHHHHHHH-----HHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 008613           70 AAKMLKKQGNEL-----YSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLK-TKQYDECIKVGSEVL  141 (559)
Q Consensus        70 ~a~~lk~~Gn~~-----~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylk-lg~y~eAi~~~~~AL  141 (559)
                      .+-.++-+|+.|     +..|.-++|...|.+|..+..... .+.++++.-+..|.+..|+. +++.++|++.+..|+
T Consensus       117 kVFY~KmKGDYyRYlaE~~~~~~~~a~~aY~~A~~ia~~~l-~pt~PirLGLaLN~SVF~yEi~~~~~~A~~lAk~A~  193 (220)
T d2o8pa1         117 KFFKLKVKSDISRYKLEFGLCSLEDSKKIHQDAFTLLCEHP-DKIEQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLG  193 (220)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHCG-GGGGGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhHHHHHHHHHhcchHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            344555666653     357788899999999998654332 23355566677788876665 678999999887774


No 79 
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.26  E-value=26  Score=24.06  Aligned_cols=19  Identities=21%  Similarity=0.398  Sum_probs=15.0

Q ss_pred             HHHHHHHHhcCCHHHHHHH
Q 008613          462 KQMFSSMVKNMSPEMMANM  480 (559)
Q Consensus       462 ~~m~~~mmk~m~p~~~~~m  480 (559)
                      -|....|+|+.|||+|..+
T Consensus        35 c~~vA~~ikgKt~eeiR~~   53 (55)
T d1fs1b1          35 CKTVANMIKGKTPEEIRKT   53 (55)
T ss_dssp             HHHHHHHHTTCCHHHHHHH
T ss_pred             HHHHHHHHcCCCHHHHHHH
Confidence            4667889999999988653


No 80 
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.02  E-value=1.2e+02  Score=28.15  Aligned_cols=91  Identities=13%  Similarity=-0.008  Sum_probs=54.5

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHcCCCCH-
Q 008613           71 AKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEGRTLLLACSLNSMSCYLKTKQYDECIKVGSEV-LAYDAKNV-  148 (559)
Q Consensus        71 a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~~~l~~~~~~nlA~~ylklg~y~eAi~~~~~A-L~ldP~~~-  148 (559)
                      ++.+-..-..|-..|.+++.+.++..++...+.+..         .+..++.+|.+-+ .++-.+++... ..+++..+ 
T Consensus        99 ~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~~~~~~~---------~~~~L~~lyak~~-~~kl~e~l~~~s~~y~~~k~~  168 (336)
T d1b89a_          99 ADELEELINYYQDRGYFEELITMLEAALGLERAHMG---------MFTELAILYSKFK-PQKMREHLELFWSRVNIPKVL  168 (336)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCCHH---------HHHHHHHHHHTTC-HHHHHHHHHHHSTTSCHHHHH
T ss_pred             HHHHHHHHHHHHHcCChHHHHHHHHHHHcCCccchH---------HHHHHHHHHHHhC-hHHHHHHHHhccccCCHHHHH
Confidence            444445566677889999999999998876555432         5667777776643 34444444332 22222211 


Q ss_pred             ------HHHHHHHHHHHHcCCHHHHHHHH
Q 008613          149 ------KALYRRGQAYKDIGRLEEAVSDL  171 (559)
Q Consensus       149 ------kal~~rG~A~~~lg~~eeAi~dl  171 (559)
                            +.|-.+...|...++|++|+..+
T Consensus       169 ~~c~~~~l~~elv~Ly~~~~~~~~A~~~~  197 (336)
T d1b89a_         169 RAAEQAHLWAELVFLYDKYEEYDNAIITM  197 (336)
T ss_dssp             HHHHTTTCHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHcCChHHHHHHHHhcCCHHHHHHHH
Confidence                  12334556667788888776544


No 81 
>d2ijqa1 a.246.2.1 (A:14-158) Hypothetical protein rrnAC1037 {Haloarcula marismortui [TaxId: 2238]}
Probab=22.56  E-value=1.6e+02  Score=23.85  Aligned_cols=61  Identities=8%  Similarity=0.054  Sum_probs=47.3

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHcCCC-C-----HHHHHHHHHH-H--HHcCCHHHHHHHHHHHHHh
Q 008613          117 SLNSMSCYLKTKQYDECIKVGSEVLAYDAK-N-----VKALYRRGQA-Y--KDIGRLEEAVSDLSNAHEV  177 (559)
Q Consensus       117 ~~nlA~~ylklg~y~eAi~~~~~AL~ldP~-~-----~kal~~rG~A-~--~~lg~~eeAi~dlekAl~l  177 (559)
                      .+..|.-++..|+|-+|-+.++.+..-.+. .     .+.+...+.+ |  ...|+..-|...+.+++..
T Consensus        20 a~~~Gi~lfN~g~y~eaHE~lEe~W~~~~~~~~er~~~QGLIQ~Aaa~~hh~~~gN~~GA~~l~~~al~~   89 (145)
T d2ijqa1          20 AVVHGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY   89 (145)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            346678888999999999999999865433 3     3466666665 3  4778999999999999875


No 82 
>d1yvia1 a.24.10.2 (A:2-143) Histidine-containing phosphotransfer protein HP1 {Rice (Oryza sativa) [TaxId: 4530]}
Probab=21.46  E-value=1.6e+02  Score=23.29  Aligned_cols=13  Identities=8%  Similarity=0.051  Sum_probs=5.6

Q ss_pred             HHcCCHHHHHHHH
Q 008613           82 YSEGRFSNALQKY   94 (559)
Q Consensus        82 ~k~g~y~eAi~~Y   94 (559)
                      .+.++++.+...|
T Consensus       104 ~~~~~~~~~~~~~  116 (142)
T d1yvia1         104 CQDKSRDGCLMAL  116 (142)
T ss_dssp             HHTTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHH
Confidence            3444444444433


No 83 
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.23  E-value=2.4e+02  Score=24.16  Aligned_cols=102  Identities=14%  Similarity=0.076  Sum_probs=52.0

Q ss_pred             hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCCCchh-hhhHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHcC
Q 008613           67 EFNAAKMLKKQGNELYSEGRFSNALQKYLLAKKNLQGIHSSEG-RTLLLACSLNSMSCYLKTKQ-YDECIKVGSEVLAYD  144 (559)
Q Consensus        67 ~~~~a~~lk~~Gn~~~k~g~y~eAi~~Y~kAL~l~p~~~~~e~-~~l~~~~~~nlA~~ylklg~-y~eAi~~~~~AL~ld  144 (559)
                      +++....+.+.=+++....+|++|++...++=++....+.... ...   .  .+..+..+..+ ...-+......+. .
T Consensus         8 ~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~---~--~~~~i~~kv~~r~~~L~~~L~~~l~-~   81 (229)
T d2d2sa1           8 RLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEEL---M--LLNLISLKIEQRREAISSKLSQSIL-S   81 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------C---H--HHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred             hhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchH---H--HHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence            4555666777778999999999999987654433222221100 000   0  00111111111 1111222223332 2


Q ss_pred             CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 008613          145 AKNVKALYRRGQAYKDIGRLEEAVSDLSNA  174 (559)
Q Consensus       145 P~~~kal~~rG~A~~~lg~~eeAi~dlekA  174 (559)
                      ........+.-..+..+|+.++|...|-++
T Consensus        82 ~~~~~~~~~~v~~L~rLg~~~~A~~lfL~~  111 (229)
T d2d2sa1          82 SNEIVHLKSGTENMIKLGLPEQALDLFLQN  111 (229)
T ss_dssp             CSSHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred             cCChHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence            234555555566667889999988777544


Done!