Query 008615
Match_columns 559
No_of_seqs 483 out of 3063
Neff 11.0
Searched_HMMs 46136
Date Thu Mar 28 14:24:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008615.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008615hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0569 Permease of the major 100.0 9E-44 2E-48 342.4 44.3 447 97-559 7-471 (485)
2 TIGR01299 synapt_SV2 synaptic 100.0 7.2E-43 1.6E-47 358.8 40.4 426 99-549 165-740 (742)
3 TIGR00887 2A0109 phosphate:H+ 100.0 1.5E-41 3.3E-46 345.6 35.9 435 101-556 16-502 (502)
4 PRK10077 xylE D-xylose transpo 100.0 7.7E-40 1.7E-44 333.2 43.7 433 101-558 12-473 (479)
5 KOG0254 Predicted transporter 100.0 1.1E-39 2.5E-44 331.6 44.5 446 98-558 42-499 (513)
6 TIGR00879 SP MFS transporter, 100.0 6.5E-40 1.4E-44 334.8 42.7 441 99-552 26-480 (481)
7 COG2271 UhpC Sugar phosphate p 100.0 8.1E-40 1.8E-44 300.1 23.1 401 101-543 29-435 (448)
8 COG2814 AraJ Arabinose efflux 100.0 9.6E-38 2.1E-42 291.6 33.4 371 104-544 16-388 (394)
9 PRK10642 proline/glycine betai 100.0 3.1E-37 6.7E-42 312.8 35.4 394 103-548 18-435 (490)
10 TIGR00898 2A0119 cation transp 100.0 3.1E-37 6.7E-42 315.8 33.9 383 138-552 119-504 (505)
11 PRK03545 putative arabinose tr 100.0 7.3E-37 1.6E-41 302.1 33.4 361 111-543 19-381 (390)
12 PRK11663 regulatory protein Uh 100.0 1.3E-36 2.9E-41 303.7 32.0 396 106-548 28-430 (434)
13 PRK09556 uhpT sugar phosphate 100.0 5.6E-37 1.2E-41 309.4 28.2 399 99-541 27-448 (467)
14 TIGR02332 HpaX 4-hydroxyphenyl 100.0 4.1E-36 8.9E-41 297.6 32.2 392 102-531 9-410 (412)
15 PRK11551 putative 3-hydroxyphe 100.0 4.2E-36 9.2E-41 298.9 31.6 379 100-543 14-397 (406)
16 PRK12307 putative sialic acid 100.0 7.5E-36 1.6E-40 299.1 33.2 369 104-523 21-389 (426)
17 PRK09705 cynX putative cyanate 100.0 3.5E-35 7.6E-40 289.5 35.5 360 118-549 26-388 (393)
18 PRK10406 alpha-ketoglutarate t 100.0 4E-35 8.7E-40 293.1 35.3 375 102-540 23-422 (432)
19 PF00083 Sugar_tr: Sugar (and 100.0 2.9E-42 6.3E-47 348.0 -20.4 433 106-557 5-451 (451)
20 KOG0253 Synaptic vesicle trans 100.0 5.2E-35 1.1E-39 261.0 28.2 391 138-550 108-527 (528)
21 PRK14995 methyl viologen resis 100.0 4.3E-34 9.4E-39 289.9 36.4 395 100-516 5-412 (495)
22 PRK09952 shikimate transporter 100.0 8.3E-34 1.8E-38 283.5 36.8 384 103-544 24-434 (438)
23 TIGR00903 2A0129 major facilit 100.0 6.1E-35 1.3E-39 282.7 27.2 348 120-539 10-362 (368)
24 TIGR00893 2A0114 d-galactonate 100.0 1.1E-34 2.4E-39 288.6 27.5 385 115-540 8-397 (399)
25 TIGR00891 2A0112 putative sial 100.0 5.2E-34 1.1E-38 284.4 32.2 383 103-526 14-400 (405)
26 PRK10213 nepI ribonucleoside t 100.0 1.5E-33 3.3E-38 277.5 34.9 344 122-537 41-386 (394)
27 PRK15075 citrate-proton sympor 100.0 7.4E-34 1.6E-38 284.1 33.1 358 103-521 17-398 (434)
28 TIGR00890 2A0111 Oxalate/Forma 100.0 1.2E-34 2.6E-39 286.1 27.2 354 119-535 21-375 (377)
29 PRK11273 glpT sn-glycerol-3-ph 100.0 1.1E-33 2.4E-38 284.2 34.0 389 108-543 36-436 (452)
30 PRK10091 MFS transport protein 100.0 1.9E-33 4.2E-38 276.5 32.1 368 106-544 8-378 (382)
31 PRK15034 nitrate/nitrite trans 100.0 4.8E-33 1E-37 270.3 34.0 362 118-545 51-457 (462)
32 PRK05122 major facilitator sup 100.0 1.5E-33 3.3E-38 279.8 30.3 361 111-548 25-394 (399)
33 TIGR00894 2A0114euk Na(+)-depe 100.0 2.7E-33 5.8E-38 283.3 31.5 399 104-540 22-448 (465)
34 PRK10489 enterobactin exporter 100.0 2.1E-34 4.6E-39 287.2 22.4 375 118-557 34-414 (417)
35 PRK03893 putative sialic acid 100.0 5.6E-33 1.2E-37 284.0 32.5 407 103-533 22-444 (496)
36 PRK03699 putative transporter; 100.0 7.1E-33 1.5E-37 273.7 31.9 366 106-540 12-378 (394)
37 PRK15402 multidrug efflux syst 100.0 1E-32 2.2E-37 274.2 32.7 387 97-544 9-397 (406)
38 PRK03633 putative MFS family t 100.0 3E-32 6.5E-37 268.2 35.2 357 105-537 10-367 (381)
39 KOG0255 Synaptic vesicle trans 100.0 1.2E-32 2.6E-37 282.2 33.1 394 138-556 113-506 (521)
40 KOG0252 Inorganic phosphate tr 100.0 6.4E-35 1.4E-39 269.0 14.0 445 92-557 33-512 (538)
41 PRK12382 putative transporter; 100.0 2.4E-32 5.2E-37 270.4 33.2 351 116-542 30-389 (392)
42 TIGR00892 2A0113 monocarboxyla 100.0 4.1E-33 8.9E-38 279.4 24.8 371 120-536 38-415 (455)
43 PLN00028 nitrate transmembrane 100.0 2E-32 4.3E-37 275.9 29.0 362 119-541 54-432 (476)
44 TIGR00712 glpT glycerol-3-phos 100.0 2.7E-32 5.9E-37 273.2 29.4 375 138-546 56-437 (438)
45 PRK15403 multidrug efflux syst 100.0 1.3E-31 2.7E-36 265.4 33.7 377 96-534 11-389 (413)
46 PRK10504 putative transporter; 100.0 1.1E-31 2.4E-36 272.3 34.0 389 107-520 16-418 (471)
47 TIGR00895 2A0115 benzoate tran 100.0 5.2E-32 1.1E-36 269.3 29.7 375 106-514 22-397 (398)
48 TIGR00711 efflux_EmrB drug res 100.0 8E-32 1.7E-36 275.0 30.0 395 103-518 4-411 (485)
49 PRK09874 drug efflux system pr 100.0 1.5E-31 3.2E-36 266.7 30.3 369 110-544 23-400 (408)
50 TIGR00900 2A0121 H+ Antiporter 100.0 2.7E-32 5.8E-37 268.1 24.6 349 111-519 9-365 (365)
51 KOG2532 Permease of the major 100.0 3.3E-31 7.2E-36 259.5 29.6 363 138-541 68-446 (466)
52 TIGR00710 efflux_Bcr_CflA drug 100.0 4E-31 8.7E-36 261.7 30.5 344 111-516 15-360 (385)
53 TIGR00897 2A0118 polyol permea 100.0 6.4E-31 1.4E-35 260.4 31.8 350 138-540 43-399 (402)
54 PRK11043 putative transporter; 100.0 5.5E-31 1.2E-35 261.5 31.3 341 115-520 20-360 (401)
55 TIGR00881 2A0104 phosphoglycer 100.0 1.8E-32 3.9E-37 270.8 20.2 372 111-524 5-379 (379)
56 TIGR00899 2A0120 sugar efflux 100.0 6.4E-31 1.4E-35 259.1 31.1 360 110-539 6-371 (375)
57 KOG1330 Sugar transporter/spin 100.0 6.9E-33 1.5E-37 257.0 15.5 373 96-518 28-413 (493)
58 COG2223 NarK Nitrate/nitrite t 100.0 4.4E-31 9.5E-36 243.5 25.0 349 138-545 44-404 (417)
59 KOG2533 Permease of the major 100.0 4E-31 8.8E-36 259.1 25.3 388 91-525 35-439 (495)
60 PRK10133 L-fucose transporter; 100.0 2.4E-30 5.2E-35 257.4 31.1 364 105-535 30-426 (438)
61 PRK11195 lysophospholipid tran 100.0 1.2E-30 2.5E-35 256.9 27.9 348 138-544 33-382 (393)
62 cd06174 MFS The Major Facilita 100.0 2.9E-30 6.3E-35 252.2 29.9 342 108-539 6-349 (352)
63 PRK10473 multidrug efflux syst 100.0 3.4E-30 7.5E-35 255.0 30.2 344 117-532 19-364 (392)
64 PF07690 MFS_1: Major Facilita 100.0 6.7E-31 1.5E-35 256.8 23.4 344 110-508 5-352 (352)
65 PRK11010 ampG muropeptide tran 100.0 6.1E-30 1.3E-34 258.1 30.7 370 111-541 22-402 (491)
66 PRK11646 multidrug resistance 100.0 4.4E-30 9.4E-35 253.5 28.7 337 138-537 41-383 (400)
67 PRK10054 putative transporter; 100.0 4.8E-30 1.1E-34 252.7 26.9 340 138-539 38-381 (395)
68 TIGR00885 fucP L-fucose:H+ sym 100.0 1.1E-29 2.4E-34 250.4 29.3 359 104-531 6-401 (410)
69 PRK11102 bicyclomycin/multidru 100.0 1.3E-29 2.7E-34 249.9 29.1 333 117-510 7-342 (377)
70 TIGR00883 2A0106 metabolite-pr 100.0 9.7E-30 2.1E-34 252.7 27.7 338 140-530 27-389 (394)
71 PRK11652 emrD multidrug resist 100.0 9.6E-29 2.1E-33 244.8 31.3 336 116-517 23-360 (394)
72 PRK15011 sugar efflux transpor 100.0 2E-28 4.3E-33 241.8 32.9 337 138-540 46-389 (393)
73 TIGR00902 2A0127 phenyl propri 100.0 8.9E-29 1.9E-33 243.3 29.8 357 110-537 13-374 (382)
74 TIGR00896 CynX cyanate transpo 100.0 2.9E-28 6.2E-33 237.8 29.9 332 118-520 17-351 (355)
75 TIGR00889 2A0110 nucleoside tr 100.0 3.4E-28 7.3E-33 240.9 28.0 352 138-548 33-408 (418)
76 KOG2504 Monocarboxylate transp 100.0 2.2E-29 4.8E-34 249.9 18.8 425 91-540 40-474 (509)
77 PRK09528 lacY galactoside perm 100.0 3.7E-28 8E-33 242.4 27.6 352 138-544 41-405 (420)
78 PRK11128 putative 3-phenylprop 100.0 8.2E-28 1.8E-32 236.6 29.7 352 114-536 17-373 (382)
79 PRK11902 ampG muropeptide tran 100.0 1.2E-27 2.6E-32 237.1 30.1 372 110-544 8-392 (402)
80 TIGR00886 2A0108 nitrite extru 100.0 3.2E-28 7E-33 239.0 25.3 334 117-503 17-365 (366)
81 KOG3764 Vesicular amine transp 100.0 3.8E-29 8.3E-34 226.9 14.6 346 138-541 101-453 (464)
82 TIGR00882 2A0105 oligosacchari 100.0 2.8E-27 6E-32 234.3 28.4 347 138-540 33-393 (396)
83 COG0738 FucP Fucose permease [ 100.0 5.7E-27 1.2E-31 214.7 26.4 364 105-536 17-403 (422)
84 PRK06814 acylglycerophosphoeth 100.0 4.6E-27 1E-31 263.3 31.6 345 142-535 51-415 (1140)
85 PF06609 TRI12: Fungal trichot 100.0 2.6E-26 5.7E-31 227.6 30.6 396 97-516 40-466 (599)
86 PRK08633 2-acyl-glycerophospho 100.0 2.9E-26 6.4E-31 258.0 32.7 342 141-534 45-402 (1146)
87 PF05977 MFS_3: Transmembrane 100.0 7.2E-26 1.6E-30 226.0 29.7 378 93-540 9-392 (524)
88 COG2807 CynX Cyanate permease 99.9 7E-25 1.5E-29 197.8 31.1 355 116-541 27-384 (395)
89 PRK10207 dipeptide/tripeptide 99.9 2.4E-25 5.2E-30 223.4 28.7 391 138-543 45-477 (489)
90 KOG2615 Permease of the major 99.9 2.1E-26 4.6E-31 207.9 18.7 357 138-534 63-432 (451)
91 TIGR00805 oat sodium-independe 99.9 4.3E-26 9.4E-31 235.0 23.9 373 109-517 41-581 (633)
92 TIGR00792 gph sugar (Glycoside 99.9 9.9E-26 2.1E-30 226.8 25.4 329 138-521 30-384 (437)
93 TIGR00924 yjdL_sub1_fam amino 99.9 1.4E-24 3.1E-29 218.0 32.2 393 138-544 43-470 (475)
94 TIGR00901 2A0125 AmpG-related 99.9 1.2E-25 2.7E-30 219.5 23.8 326 119-501 6-355 (356)
95 TIGR02718 sider_RhtX_FptX side 99.9 8.9E-25 1.9E-29 215.9 29.3 370 106-537 6-386 (390)
96 TIGR00806 rfc RFC reduced fola 99.9 4.5E-25 9.7E-30 209.8 25.3 350 138-511 56-409 (511)
97 PTZ00207 hypothetical protein; 99.9 1.2E-23 2.5E-28 210.6 30.6 389 138-546 57-556 (591)
98 PRK09584 tppB putative tripept 99.9 6.4E-23 1.4E-27 207.2 27.7 392 138-540 52-477 (500)
99 PF03825 Nuc_H_symport: Nucleo 99.9 1.3E-21 2.9E-26 190.0 30.6 352 138-545 32-398 (400)
100 TIGR01301 GPH_sucrose GPH fami 99.9 1.4E-21 3E-26 191.9 27.1 368 138-547 34-476 (477)
101 PRK09669 putative symporter Ya 99.9 1.3E-21 2.8E-26 196.6 24.9 326 138-520 40-391 (444)
102 TIGR00788 fbt folate/biopterin 99.9 1.5E-21 3.3E-26 195.6 22.6 377 110-530 35-431 (468)
103 KOG4686 Predicted sugar transp 99.9 2.7E-22 5.9E-27 173.5 14.4 382 100-541 43-442 (459)
104 PRK15462 dipeptide/tripeptide 99.9 1.6E-19 3.4E-24 178.2 30.6 383 138-534 40-469 (493)
105 PRK10429 melibiose:sodium symp 99.9 5.4E-20 1.2E-24 185.9 25.4 334 138-520 37-396 (473)
106 KOG2563 Permease of the major 99.9 1.6E-19 3.5E-24 168.0 26.2 393 99-548 43-456 (480)
107 PF13347 MFS_2: MFS/sugar tran 99.9 1.4E-19 3.1E-24 180.8 26.4 329 138-521 32-388 (428)
108 PF11700 ATG22: Vacuole efflux 99.9 2.2E-18 4.7E-23 170.7 34.0 361 142-547 69-472 (477)
109 PF01306 LacY_symp: LacY proto 99.9 5.1E-21 1.1E-25 181.8 14.1 354 138-547 38-405 (412)
110 TIGR01272 gluP glucose/galacto 99.8 3.2E-19 6.9E-24 168.8 22.6 277 191-528 5-301 (310)
111 PRK09848 glucuronide transport 99.8 1.4E-18 3E-23 174.9 27.5 325 138-520 39-391 (448)
112 PRK11462 putative transporter; 99.8 2.4E-18 5.1E-23 172.5 28.7 325 138-520 40-390 (460)
113 COG2211 MelB Na+/melibiose sym 99.8 8.7E-18 1.9E-22 161.3 28.1 330 138-520 43-399 (467)
114 COG3104 PTR2 Dipeptide/tripept 99.8 2.8E-17 6.1E-22 156.1 22.6 401 138-543 56-488 (498)
115 COG2270 Permeases of the major 99.8 3E-16 6.5E-21 145.8 28.1 352 141-546 56-432 (438)
116 KOG2325 Predicted transporter/ 99.8 1E-17 2.2E-22 161.1 17.7 399 90-543 27-476 (488)
117 KOG3626 Organic anion transpor 99.7 4.2E-16 9.2E-21 156.1 25.2 378 104-517 100-649 (735)
118 PF03209 PUCC: PUCC protein; 99.7 2.2E-14 4.7E-19 134.1 27.1 329 138-517 10-363 (403)
119 PF03137 OATP: Organic Anion T 99.7 3.5E-18 7.6E-23 171.7 -0.6 379 110-518 12-515 (539)
120 PRK10642 proline/glycine betai 99.7 1.3E-15 2.9E-20 154.7 16.6 176 138-317 281-459 (490)
121 TIGR00880 2_A_01_02 Multidrug 99.6 3E-15 6.6E-20 124.8 10.8 136 149-285 4-140 (141)
122 PF03092 BT1: BT1 family; Int 99.6 1.2E-13 2.6E-18 136.7 16.6 345 138-519 20-382 (433)
123 TIGR01299 synapt_SV2 synaptic 99.5 1.3E-13 2.7E-18 143.3 15.0 141 145-287 597-737 (742)
124 KOG2816 Predicted transporter 99.5 1.9E-12 4.1E-17 127.0 22.3 315 151-517 70-392 (463)
125 PRK15011 sugar efflux transpor 99.5 5.1E-13 1.1E-17 132.1 17.3 146 138-285 247-392 (393)
126 COG2814 AraJ Arabinose efflux 99.5 9.3E-13 2E-17 124.3 17.3 178 359-543 12-189 (394)
127 PRK09528 lacY galactoside perm 99.5 1.1E-13 2.4E-18 138.2 11.9 147 138-285 257-405 (420)
128 TIGR00889 2A0110 nucleoside tr 99.5 1.6E-13 3.5E-18 136.2 11.5 147 140-286 248-405 (418)
129 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.7E-12 3.7E-17 128.9 18.0 181 359-546 7-193 (412)
130 TIGR00890 2A0111 Oxalate/Forma 99.5 3.8E-13 8.3E-18 132.6 12.9 139 138-277 235-375 (377)
131 cd06174 MFS The Major Facilita 99.5 9.2E-13 2E-17 128.5 14.4 145 138-283 206-351 (352)
132 PRK03545 putative arabinose tr 99.5 3.1E-12 6.6E-17 126.6 17.9 160 379-545 28-187 (390)
133 PRK10213 nepI ribonucleoside t 99.5 3.4E-12 7.5E-17 126.0 18.0 160 379-545 39-198 (394)
134 PRK05122 major facilitator sup 99.4 1.2E-12 2.7E-17 130.0 14.9 141 144-285 250-390 (399)
135 TIGR00710 efflux_Bcr_CflA drug 99.4 2.2E-12 4.8E-17 127.6 16.6 164 377-547 22-185 (385)
136 TIGR00895 2A0115 benzoate tran 99.4 1.4E-12 3E-17 129.6 14.6 178 361-545 18-195 (398)
137 PRK11663 regulatory protein Uh 99.4 3.5E-12 7.5E-17 127.9 17.1 161 377-544 40-200 (434)
138 PRK10054 putative transporter; 99.4 4.5E-12 9.8E-17 125.2 17.5 161 377-545 24-185 (395)
139 PRK11551 putative 3-hydroxyphe 99.4 1.8E-12 4E-17 129.1 14.2 147 138-284 250-396 (406)
140 PF05631 DUF791: Protein of un 99.4 1.5E-10 3.2E-15 106.9 25.0 234 138-423 64-305 (354)
141 PF01770 Folate_carrier: Reduc 99.4 6.3E-11 1.4E-15 112.5 23.3 352 138-507 35-392 (412)
142 TIGR00899 2A0120 sugar efflux 99.4 5.1E-12 1.1E-16 124.5 16.4 145 138-284 230-374 (375)
143 COG2271 UhpC Sugar phosphate p 99.4 7.2E-12 1.6E-16 116.8 15.8 161 378-545 47-209 (448)
144 PRK12382 putative transporter; 99.4 2.9E-12 6.3E-17 126.9 13.8 137 145-282 251-387 (392)
145 PRK10473 multidrug efflux syst 99.4 6.5E-12 1.4E-16 124.4 16.1 172 368-546 11-182 (392)
146 TIGR00902 2A0127 phenyl propri 99.4 7.4E-12 1.6E-16 123.3 16.1 141 138-281 235-376 (382)
147 TIGR00711 efflux_EmrB drug res 99.4 3E-12 6.4E-17 130.9 13.4 165 375-546 17-181 (485)
148 PRK14995 methyl viologen resis 99.4 8.2E-12 1.8E-16 127.2 16.2 179 361-546 7-186 (495)
149 PRK10489 enterobactin exporter 99.4 1.2E-11 2.5E-16 123.7 17.0 189 349-544 10-198 (417)
150 TIGR00893 2A0114 d-galactonate 99.4 5.4E-12 1.2E-16 125.3 14.6 162 378-546 12-173 (399)
151 PRK10091 MFS transport protein 99.4 1.2E-11 2.6E-16 121.9 16.8 163 378-547 21-183 (382)
152 PRK09874 drug efflux system pr 99.4 3.2E-12 6.9E-17 127.5 12.4 138 144-282 259-396 (408)
153 PRK10504 putative transporter; 99.4 1.7E-11 3.8E-16 124.6 17.6 168 370-544 20-187 (471)
154 PRK09556 uhpT sugar phosphate 99.4 9.6E-12 2.1E-16 126.0 15.1 144 138-282 289-447 (467)
155 TIGR00891 2A0112 putative sial 99.4 2.6E-11 5.6E-16 120.9 18.0 179 359-545 11-191 (405)
156 TIGR00892 2A0113 monocarboxyla 99.4 5.2E-12 1.1E-16 127.1 13.0 141 138-278 271-415 (455)
157 TIGR00900 2A0121 H+ Antiporter 99.4 2E-11 4.3E-16 119.8 16.6 161 378-540 17-177 (365)
158 PRK03699 putative transporter; 99.4 2.9E-11 6.3E-16 119.7 17.7 157 376-539 23-180 (394)
159 PRK15402 multidrug efflux syst 99.4 2.5E-11 5.4E-16 120.8 17.2 181 359-546 12-192 (406)
160 PRK15403 multidrug efflux syst 99.4 2.7E-11 5.9E-16 120.4 17.2 158 382-546 38-195 (413)
161 PLN00028 nitrate transmembrane 99.4 5.5E-11 1.2E-15 120.4 19.5 159 377-543 53-220 (476)
162 PRK11652 emrD multidrug resist 99.3 3.2E-11 7E-16 119.6 17.4 161 379-546 27-187 (394)
163 PF07690 MFS_1: Major Facilita 99.3 6.6E-12 1.4E-16 122.6 11.9 159 378-543 14-173 (352)
164 PRK03633 putative MFS family t 99.3 1.8E-11 3.9E-16 120.6 15.0 142 138-283 230-371 (381)
165 PRK11646 multidrug resistance 99.3 4.6E-11 1E-15 118.2 17.5 159 379-545 29-188 (400)
166 PRK15462 dipeptide/tripeptide 99.3 4.9E-11 1.1E-15 118.3 17.4 158 375-538 24-185 (493)
167 TIGR00924 yjdL_sub1_fam amino 99.3 5.6E-11 1.2E-15 119.9 17.3 157 374-537 24-187 (475)
168 KOG1330 Sugar transporter/spin 99.3 2.3E-12 5E-17 121.2 6.7 187 360-553 33-220 (493)
169 TIGR00883 2A0106 metabolite-pr 99.3 8.9E-12 1.9E-16 123.7 10.9 138 138-275 250-392 (394)
170 TIGR00903 2A0129 major facilit 99.3 4.3E-11 9.2E-16 116.4 15.3 161 378-546 9-169 (368)
171 TIGR00881 2A0104 phosphoglycer 99.3 1.1E-11 2.4E-16 122.3 11.3 161 378-545 13-174 (379)
172 PRK12307 putative sialic acid 99.3 5.5E-11 1.2E-15 119.3 16.1 155 367-528 25-179 (426)
173 PRK11102 bicyclomycin/multidru 99.3 3.5E-11 7.7E-16 118.6 14.4 160 379-545 10-169 (377)
174 PRK11043 putative transporter; 99.3 1.2E-10 2.6E-15 115.8 18.2 155 382-543 28-182 (401)
175 PRK03893 putative sialic acid 99.3 6.6E-11 1.4E-15 121.3 16.2 158 365-529 25-182 (496)
176 TIGR00897 2A0118 polyol permea 99.3 6.8E-11 1.5E-15 117.4 15.6 163 378-543 31-194 (402)
177 PRK11273 glpT sn-glycerol-3-ph 99.3 1.4E-10 3E-15 117.0 17.3 163 379-545 48-211 (452)
178 TIGR00712 glpT glycerol-3-phos 99.3 5.3E-11 1.1E-15 119.6 14.1 163 379-545 46-209 (438)
179 PRK09952 shikimate transporter 99.3 6.5E-11 1.4E-15 118.7 14.7 149 138-286 281-435 (438)
180 TIGR00879 SP MFS transporter, 99.3 5.3E-11 1.1E-15 121.5 13.6 149 138-287 314-474 (481)
181 PRK11128 putative 3-phenylprop 99.3 1.4E-10 3E-15 114.4 15.9 140 138-280 235-375 (382)
182 PRK10077 xylE D-xylose transpo 99.3 1.3E-10 2.9E-15 118.5 16.2 149 138-287 301-461 (479)
183 TIGR00886 2A0108 nitrite extru 99.3 2.8E-10 6.1E-15 111.7 17.7 161 377-544 18-190 (366)
184 PRK09705 cynX putative cyanate 99.2 9.6E-11 2.1E-15 115.8 14.3 148 138-287 235-385 (393)
185 TIGR00894 2A0114euk Na(+)-depe 99.2 9.2E-11 2E-15 119.0 14.3 151 389-544 70-221 (465)
186 TIGR00882 2A0105 oligosacchari 99.2 1.1E-10 2.3E-15 115.9 14.1 141 139-280 250-391 (396)
187 PF05977 MFS_3: Transmembrane 99.2 7.3E-11 1.6E-15 118.7 12.9 142 138-280 249-390 (524)
188 PRK11195 lysophospholipid tran 99.2 3.7E-10 7.9E-15 111.6 16.8 174 356-545 3-176 (393)
189 PRK10207 dipeptide/tripeptide 99.2 3.6E-10 7.7E-15 114.1 16.9 154 376-535 30-187 (489)
190 KOG3098 Uncharacterized conser 99.2 6.2E-09 1.3E-13 100.9 24.3 316 149-513 56-410 (461)
191 PRK15034 nitrate/nitrite trans 99.2 6E-10 1.3E-14 109.4 16.6 164 379-545 53-235 (462)
192 PRK11010 ampG muropeptide tran 99.2 1.5E-09 3.3E-14 110.1 20.2 147 138-285 253-404 (491)
193 KOG3762 Predicted transporter 99.2 1.1E-09 2.3E-14 105.1 17.2 178 351-539 366-544 (618)
194 PF11700 ATG22: Vacuole efflux 99.2 4.5E-10 9.7E-15 111.9 15.3 148 138-285 312-469 (477)
195 COG2223 NarK Nitrate/nitrite t 99.2 8.5E-10 1.8E-14 103.3 16.1 161 378-544 32-195 (417)
196 PRK09584 tppB putative tripept 99.2 8.1E-10 1.8E-14 112.2 17.2 154 376-535 37-194 (500)
197 TIGR00880 2_A_01_02 Multidrug 99.2 8.5E-11 1.8E-15 97.7 8.4 135 404-544 6-140 (141)
198 TIGR00792 gph sugar (Glycoside 99.2 1.4E-09 3E-14 109.6 18.4 121 141-262 255-383 (437)
199 TIGR00885 fucP L-fucose:H+ sym 99.2 1.4E-09 3.1E-14 107.7 17.6 157 378-538 21-203 (410)
200 TIGR00887 2A0109 phosphate:H+ 99.1 1.7E-09 3.6E-14 110.7 17.9 149 396-545 56-227 (502)
201 KOG2504 Monocarboxylate transp 99.1 7.2E-10 1.6E-14 111.0 14.0 147 138-284 328-476 (509)
202 TIGR02718 sider_RhtX_FptX side 99.1 9.5E-10 2.1E-14 108.8 14.5 142 138-280 238-387 (390)
203 TIGR00898 2A0119 cation transp 99.1 1.2E-09 2.7E-14 112.1 15.6 135 150-287 362-498 (505)
204 TIGR01272 gluP glucose/galacto 99.1 2.4E-09 5.3E-14 101.5 15.8 132 138-273 173-304 (310)
205 PRK06814 acylglycerophosphoeth 99.1 2E-09 4.4E-14 121.6 17.4 192 350-545 5-197 (1140)
206 COG2270 Permeases of the major 99.1 6.2E-10 1.3E-14 104.2 10.7 149 138-286 283-431 (438)
207 PF06609 TRI12: Fungal trichot 99.1 1.5E-09 3.3E-14 108.9 14.1 154 380-542 64-217 (599)
208 PRK10406 alpha-ketoglutarate t 99.1 4.6E-09 1E-13 105.3 17.6 158 376-534 38-211 (432)
209 TIGR00805 oat sodium-independe 99.1 1.5E-09 3.3E-14 112.8 14.4 177 363-540 36-279 (633)
210 TIGR00901 2A0125 AmpG-related 99.1 2.9E-09 6.4E-14 104.0 15.5 163 378-546 6-182 (356)
211 KOG3764 Vesicular amine transp 99.1 3.1E-10 6.7E-15 104.7 7.8 146 396-547 106-252 (464)
212 PTZ00207 hypothetical protein; 99.1 7.1E-09 1.5E-13 104.9 17.7 165 377-545 44-208 (591)
213 PRK15075 citrate-proton sympor 99.0 6.1E-09 1.3E-13 104.5 16.8 163 362-528 17-198 (434)
214 PRK10133 L-fucose transporter; 99.0 9.6E-09 2.1E-13 102.7 18.1 136 376-515 42-177 (438)
215 PRK11902 ampG muropeptide tran 99.0 7.9E-09 1.7E-13 102.7 17.3 172 367-545 6-184 (402)
216 PF06963 FPN1: Ferroportin1 (F 99.0 8.9E-07 1.9E-11 86.3 29.6 336 149-509 44-410 (432)
217 TIGR00806 rfc RFC reduced fola 99.0 1.5E-08 3.3E-13 97.9 17.0 138 378-524 44-182 (511)
218 PF06813 Nodulin-like: Nodulin 99.0 1.1E-08 2.4E-13 91.6 14.7 145 138-285 32-183 (250)
219 PRK09848 glucuronide transport 99.0 1.3E-08 2.9E-13 102.6 17.0 121 138-258 259-388 (448)
220 KOG2615 Permease of the major 99.0 2.7E-09 5.9E-14 98.0 9.8 114 396-516 68-181 (451)
221 PF01306 LacY_symp: LacY proto 99.0 5.6E-09 1.2E-13 100.1 12.4 144 138-282 254-398 (412)
222 KOG0569 Permease of the major 99.0 1.5E-08 3.3E-13 99.2 15.4 148 138-287 300-458 (485)
223 PRK08633 2-acyl-glycerophospho 99.0 3.7E-09 7.9E-14 120.0 12.6 139 138-276 263-402 (1146)
224 TIGR00896 CynX cyanate transpo 99.0 9E-09 1.9E-13 100.5 13.7 149 377-534 17-167 (355)
225 KOG0253 Synaptic vesicle trans 99.0 2.8E-09 6.1E-14 97.3 9.0 132 153-287 391-522 (528)
226 TIGR01301 GPH_sucrose GPH fami 99.0 2.3E-08 5.1E-13 99.0 16.2 169 376-546 20-222 (477)
227 TIGR00769 AAA ADP/ATP carrier 99.0 2.2E-06 4.8E-11 84.6 29.7 116 141-256 41-189 (472)
228 KOG0637 Sucrose transporter an 98.9 4.7E-09 1E-13 99.0 9.3 118 138-255 62-202 (498)
229 KOG2532 Permease of the major 98.9 1.5E-08 3.2E-13 100.4 13.3 150 390-544 68-218 (466)
230 PF02487 CLN3: CLN3 protein; 98.9 1E-07 2.3E-12 90.9 18.1 135 144-283 60-194 (402)
231 PF03825 Nuc_H_symport: Nucleo 98.9 2.2E-08 4.7E-13 97.9 13.9 148 138-285 237-397 (400)
232 TIGR00926 2A1704 Peptide:H+ sy 98.9 6.3E-07 1.4E-11 92.6 25.0 144 138-281 18-179 (654)
233 COG0477 ProP Permeases of the 98.8 3E-08 6.6E-13 94.9 12.4 139 138-276 32-177 (338)
234 PRK10429 melibiose:sodium symp 98.8 2.4E-07 5.1E-12 94.1 17.8 118 141-258 264-393 (473)
235 KOG0255 Synaptic vesicle trans 98.8 7.9E-08 1.7E-12 99.0 14.3 140 396-545 118-257 (521)
236 PRK09669 putative symporter Ya 98.8 2.6E-07 5.7E-12 93.1 17.8 117 143-259 264-389 (444)
237 COG3104 PTR2 Dipeptide/tripept 98.8 4.8E-08 1E-12 94.0 11.5 147 391-542 57-206 (498)
238 KOG4686 Predicted sugar transp 98.8 9.9E-08 2.2E-12 84.1 12.3 143 138-282 295-441 (459)
239 PF13347 MFS_2: MFS/sugar tran 98.8 6.8E-08 1.5E-12 96.8 12.1 116 143-258 260-384 (428)
240 COG0738 FucP Fucose permease [ 98.7 4.4E-07 9.5E-12 84.9 16.0 157 378-538 31-206 (422)
241 PF06813 Nodulin-like: Nodulin 98.7 1.8E-07 4E-12 83.9 13.0 167 372-542 14-181 (250)
242 COG2807 CynX Cyanate permease 98.7 3.3E-07 7.2E-12 84.3 13.5 178 93-282 204-383 (395)
243 KOG4332 Predicted sugar transp 98.7 2.3E-07 5E-12 81.1 11.6 342 138-536 67-425 (454)
244 KOG3810 Micronutrient transpor 98.7 2.2E-07 4.8E-12 84.4 10.7 370 138-540 36-419 (433)
245 COG2211 MelB Na+/melibiose sym 98.6 3.3E-06 7.2E-11 82.2 19.4 121 138-258 267-396 (467)
246 KOG3574 Acetyl-CoA transporter 98.6 4.8E-06 1E-10 76.8 19.2 351 108-519 38-433 (510)
247 TIGR00939 2a57 Equilibrative N 98.6 5.5E-06 1.2E-10 81.8 21.1 350 147-510 49-427 (437)
248 KOG0254 Predicted transporter 98.6 1.4E-06 3E-11 89.4 17.4 140 398-545 91-232 (513)
249 TIGR00788 fbt folate/biopterin 98.6 3.4E-07 7.3E-12 92.3 12.2 147 138-285 283-447 (468)
250 KOG2533 Permease of the major 98.6 2E-07 4.3E-12 92.7 9.5 146 396-547 81-232 (495)
251 KOG3762 Predicted transporter 98.5 5.4E-08 1.2E-12 93.7 3.6 144 138-282 401-545 (618)
252 KOG2816 Predicted transporter 98.5 3.1E-06 6.7E-11 83.7 15.4 185 358-551 20-208 (463)
253 PF03209 PUCC: PUCC protein; 98.5 9.7E-06 2.1E-10 76.8 17.1 144 138-281 239-395 (403)
254 PF06779 DUF1228: Protein of u 98.4 6.1E-07 1.3E-11 64.6 5.8 81 113-200 4-84 (85)
255 KOG1237 H+/oligopeptide sympor 98.4 0.00019 4.2E-09 73.1 25.7 143 138-281 68-242 (571)
256 PF05631 DUF791: Protein of un 98.4 2.6E-05 5.7E-10 72.6 16.7 156 385-548 59-222 (354)
257 PF05978 UNC-93: Ion channel r 98.3 1.1E-05 2.4E-10 66.7 11.6 107 148-255 42-148 (156)
258 PRK11462 putative transporter; 98.3 1.9E-05 4E-10 79.7 15.7 166 379-546 28-208 (460)
259 PF03219 TLC: TLC ATP/ADP tran 98.2 0.003 6.6E-08 63.1 29.2 117 141-257 56-205 (491)
260 PF00854 PTR2: POT family; In 98.2 6.3E-05 1.4E-09 73.8 15.9 108 174-282 2-121 (372)
261 KOG0252 Inorganic phosphate tr 98.2 2.5E-06 5.4E-11 81.0 5.5 130 155-288 360-502 (538)
262 KOG2325 Predicted transporter/ 98.2 3.2E-05 6.9E-10 75.7 13.2 160 385-547 59-234 (488)
263 PF00083 Sugar_tr: Sugar (and 98.2 3.2E-08 6.8E-13 100.2 -7.8 145 397-545 47-194 (451)
264 PF13000 Acatn: Acetyl-coenzym 98.1 6.9E-05 1.5E-09 72.4 14.4 141 108-255 7-177 (544)
265 COG3202 ATP/ADP translocase [E 98.1 0.0025 5.4E-08 61.9 23.5 119 140-258 58-210 (509)
266 TIGR00926 2A1704 Peptide:H+ sy 98.0 0.00023 5.1E-09 74.0 17.0 153 387-540 15-180 (654)
267 KOG1479 Nucleoside transporter 98.0 0.0034 7.4E-08 60.0 22.8 89 195-288 116-208 (406)
268 PF12832 MFS_1_like: MFS_1 lik 97.9 4.2E-05 9.1E-10 54.8 6.2 46 138-183 30-75 (77)
269 PF12832 MFS_1_like: MFS_1 lik 97.7 0.00022 4.7E-09 51.1 7.8 65 369-434 9-73 (77)
270 PF07672 MFS_Mycoplasma: Mycop 97.5 0.0011 2.4E-08 58.9 11.0 56 228-283 2-61 (267)
271 KOG2563 Permease of the major 97.5 0.0014 3.1E-08 62.8 12.5 122 396-517 79-202 (480)
272 PF02487 CLN3: CLN3 protein; 97.5 0.0026 5.7E-08 61.3 13.4 111 141-255 279-394 (402)
273 PF03092 BT1: BT1 family; Int 97.4 0.0017 3.8E-08 64.7 12.3 156 384-544 14-177 (433)
274 PRK03612 spermidine synthase; 97.4 0.0073 1.6E-07 61.5 16.0 136 138-275 45-188 (521)
275 PF05978 UNC-93: Ion channel r 97.3 0.0052 1.1E-07 51.0 11.5 108 400-514 41-148 (156)
276 PF03137 OATP: Organic Anion T 97.2 6.8E-05 1.5E-09 76.3 -1.0 175 367-542 10-250 (539)
277 KOG3626 Organic anion transpor 97.1 0.0078 1.7E-07 62.2 12.6 185 359-544 96-345 (735)
278 TIGR00769 AAA ADP/ATP carrier 97.1 0.038 8.2E-07 55.1 17.0 121 396-516 43-190 (472)
279 KOG3880 Predicted small molecu 97.0 0.00071 1.5E-08 61.0 3.6 136 145-285 64-200 (409)
280 PF01733 Nucleoside_tran: Nucl 96.8 0.00025 5.4E-09 67.2 -0.5 112 400-511 186-304 (309)
281 COG0477 ProP Permeases of the 96.7 0.049 1.1E-06 51.5 14.7 148 379-530 21-173 (338)
282 KOG3098 Uncharacterized conser 96.5 0.11 2.4E-06 51.3 15.2 101 153-254 289-410 (461)
283 PRK03612 spermidine synthase; 96.4 0.095 2.1E-06 53.5 14.9 50 489-538 143-193 (521)
284 PF01770 Folate_carrier: Reduc 96.4 0.19 4.1E-06 48.8 15.7 133 380-519 24-157 (412)
285 PF06963 FPN1: Ferroportin1 (F 96.1 0.18 3.9E-06 49.7 14.2 118 138-255 288-415 (432)
286 PF06779 DUF1228: Protein of u 96.0 0.053 1.1E-06 39.3 7.4 67 379-446 11-77 (85)
287 PF00854 PTR2: POT family; In 95.8 0.043 9.3E-07 53.8 8.9 113 427-540 2-121 (372)
288 KOG0637 Sucrose transporter an 95.7 0.014 3E-07 56.3 4.4 150 360-512 33-200 (498)
289 TIGR00939 2a57 Equilibrative N 95.2 0.84 1.8E-05 45.6 15.4 110 144-254 308-430 (437)
290 KOG3097 Predicted membrane pro 95.0 3.1 6.8E-05 38.8 17.0 73 153-226 68-140 (390)
291 KOG1237 H+/oligopeptide sympor 94.5 1.6 3.6E-05 45.0 15.6 159 380-539 58-242 (571)
292 KOG4332 Predicted sugar transp 94.1 0.11 2.3E-06 46.6 5.4 156 385-548 62-226 (454)
293 COG4262 Predicted spermidine s 93.0 2.3 5E-05 39.9 12.0 116 138-255 38-162 (508)
294 KOG2601 Iron transporter [Inor 92.0 0.9 2E-05 43.0 8.3 121 154-275 74-217 (503)
295 KOG1479 Nucleoside transporter 91.4 11 0.00023 36.8 15.1 54 369-424 27-80 (406)
296 PF03219 TLC: TLC ATP/ADP tran 91.2 2.9 6.2E-05 42.3 11.7 108 408-516 71-205 (491)
297 PF01733 Nucleoside_tran: Nucl 90.1 0.098 2.1E-06 49.7 0.3 108 147-254 186-306 (309)
298 COG3202 ATP/ADP translocase [E 90.1 19 0.00041 36.0 15.5 122 396-517 61-210 (509)
299 KOG3574 Acetyl-CoA transporter 88.8 5.9 0.00013 38.0 10.6 142 367-511 38-189 (510)
300 PF06912 DUF1275: Protein of u 84.4 28 0.00061 30.7 12.8 38 233-272 163-200 (209)
301 KOG3880 Predicted small molecu 84.2 4 8.6E-05 37.8 6.8 118 138-255 282-401 (409)
302 PF07672 MFS_Mycoplasma: Mycop 82.1 28 0.0006 31.7 11.2 103 145-248 143-255 (267)
303 KOG2881 Predicted membrane pro 77.9 53 0.0011 29.6 13.5 32 408-439 252-283 (294)
304 PF11947 DUF3464: Protein of u 77.4 17 0.00037 29.9 7.7 52 194-248 95-146 (153)
305 PF13000 Acatn: Acetyl-coenzym 77.4 13 0.00029 37.2 8.3 62 198-259 407-468 (544)
306 PF02535 Zip: ZIP Zinc transpo 76.5 71 0.0015 30.3 16.4 34 195-228 259-293 (317)
307 COG3619 Predicted membrane pro 75.8 58 0.0013 29.0 14.7 110 98-207 9-126 (226)
308 COG5336 Uncharacterized protei 75.4 12 0.00026 28.3 5.6 39 146-184 45-84 (116)
309 COG5336 Uncharacterized protei 74.7 12 0.00025 28.3 5.5 35 486-520 37-71 (116)
310 PF07857 DUF1632: CEO family ( 73.5 66 0.0014 29.3 11.2 22 262-283 114-135 (254)
311 COG1230 CzcD Co/Zn/Cd efflux s 72.4 85 0.0018 29.3 13.8 48 138-191 55-105 (296)
312 COG4262 Predicted spermidine s 69.8 1E+02 0.0023 29.5 11.6 78 457-536 107-185 (508)
313 PF11947 DUF3464: Protein of u 68.7 11 0.00025 30.8 4.8 32 475-506 114-145 (153)
314 KOG2601 Iron transporter [Inor 68.1 1.2E+02 0.0026 29.5 13.9 55 379-433 46-100 (503)
315 PRK11469 hypothetical protein; 67.9 44 0.00095 28.9 8.6 76 96-189 105-181 (188)
316 KOG3810 Micronutrient transpor 66.1 21 0.00046 34.0 6.6 110 145-257 273-384 (433)
317 PRK10263 DNA translocase FtsK; 58.4 67 0.0015 36.6 9.7 19 154-172 63-81 (1355)
318 PRK10263 DNA translocase FtsK; 58.3 27 0.00059 39.5 6.7 19 406-424 62-80 (1355)
319 PF02990 EMP70: Endomembrane p 55.7 1.9E+02 0.0042 29.9 12.2 72 350-426 252-327 (521)
320 KOG2765 Predicted membrane pro 51.9 25 0.00055 33.4 4.6 16 167-182 208-223 (416)
321 COG4769 Predicted membrane pro 51.3 21 0.00045 29.4 3.4 51 152-208 82-132 (181)
322 PF05297 Herpes_LMP1: Herpesvi 50.3 5.3 0.00011 35.9 0.0 13 535-547 178-190 (381)
323 PF04346 EutH: Ethanolamine ut 49.0 2.5E+02 0.0054 26.9 18.6 127 144-277 48-180 (354)
324 PF06638 Strabismus: Strabismu 48.5 65 0.0014 32.2 6.9 13 193-205 178-190 (505)
325 cd02434 Nodulin-21_like_3 Nodu 48.2 2E+02 0.0044 25.7 15.7 25 409-433 180-204 (225)
326 PF06570 DUF1129: Protein of u 48.0 1.9E+02 0.0042 25.4 11.0 23 261-283 175-197 (206)
327 PF02632 BioY: BioY family; I 48.0 81 0.0017 26.0 6.5 26 149-174 59-84 (148)
328 COG1268 BioY Uncharacterized c 47.0 78 0.0017 27.2 6.4 24 149-172 88-111 (184)
329 COG1971 Predicted membrane pro 45.6 2E+02 0.0043 24.8 9.7 39 151-189 145-183 (190)
330 PF02694 UPF0060: Uncharacteri 42.4 50 0.0011 25.1 4.0 51 143-193 54-104 (107)
331 TIGR02230 ATPase_gene1 F0F1-AT 41.4 1.6E+02 0.0034 22.4 7.5 29 411-439 58-86 (100)
332 COG2962 RarD Predicted permeas 38.2 3.3E+02 0.0073 25.3 9.5 41 396-438 99-139 (293)
333 PF11151 DUF2929: Protein of u 38.1 1.2E+02 0.0026 20.2 4.9 45 241-286 11-55 (57)
334 PF06123 CreD: Inner membrane 37.8 3.8E+02 0.0083 26.8 10.5 28 413-440 308-335 (430)
335 TIGR02840 spore_YtaF putative 37.2 2.8E+02 0.0061 24.4 8.7 73 95-186 127-202 (206)
336 PRK11715 inner membrane protei 36.7 4.5E+02 0.0098 26.4 10.8 29 413-441 314-342 (436)
337 PF03547 Mem_trans: Membrane t 36.6 4.2E+02 0.009 25.9 16.6 18 154-171 6-23 (385)
338 PRK02237 hypothetical protein; 36.1 2E+02 0.0043 22.1 7.6 51 143-193 56-106 (109)
339 COG2233 UraA Xanthine/uracil p 35.4 1.6E+02 0.0035 29.4 7.5 98 138-235 44-144 (451)
340 PRK11588 hypothetical protein; 34.7 5.2E+02 0.011 26.5 16.2 40 164-203 137-178 (506)
341 PF07760 DUF1616: Protein of u 34.2 3.3E+02 0.0072 25.5 9.2 56 199-255 22-77 (287)
342 TIGR02230 ATPase_gene1 F0F1-AT 33.5 2.1E+02 0.0046 21.7 6.5 34 153-186 52-86 (100)
343 COG2076 EmrE Membrane transpor 33.4 2.2E+02 0.0048 21.8 9.6 64 160-223 17-81 (106)
344 PF11298 DUF3099: Protein of u 33.3 1.6E+02 0.0034 20.9 5.1 59 167-229 11-69 (73)
345 TIGR00844 c_cpa1 na(+)/h(+) an 32.4 7.1E+02 0.015 27.3 26.6 37 236-273 105-141 (810)
346 PF10785 NADH-u_ox-rdase: NADH 30.2 2.1E+02 0.0046 21.0 5.6 42 155-196 30-78 (86)
347 PRK04201 zinc transporter ZupT 28.8 4.7E+02 0.01 24.1 12.1 22 203-227 215-236 (265)
348 PRK09609 hypothetical protein; 27.8 5.2E+02 0.011 24.4 14.1 12 261-272 77-88 (312)
349 PF11833 DUF3353: Protein of u 27.7 2.5E+02 0.0055 24.4 6.6 31 227-257 136-166 (194)
350 PRK02237 hypothetical protein; 27.5 2E+02 0.0043 22.1 5.1 47 397-443 57-103 (109)
351 PLN02601 beta-carotene hydroxy 27.2 4.4E+02 0.0095 24.2 7.9 25 462-486 214-238 (303)
352 PF02694 UPF0060: Uncharacteri 26.8 1.6E+02 0.0035 22.5 4.5 48 396-443 54-101 (107)
353 PRK15015 carbon starvation pro 26.7 8E+02 0.017 26.1 19.3 103 152-263 10-114 (701)
354 PF01405 PsbT: Photosystem II 25.8 1.2E+02 0.0025 16.9 2.7 12 277-288 17-28 (29)
355 PRK14229 camphor resistance pr 25.8 3.1E+02 0.0068 21.1 8.0 48 180-227 33-80 (108)
356 PF06800 Sugar_transport: Suga 25.7 5.4E+02 0.012 23.8 13.2 34 516-549 217-250 (269)
357 PF06027 DUF914: Eukaryotic pr 24.9 1.5E+02 0.0033 28.4 5.3 17 407-423 178-194 (334)
358 PRK13629 threonine/serine tran 24.0 7.5E+02 0.016 24.9 13.3 44 226-275 18-61 (443)
359 KOG1278 Endosomal membrane pro 23.6 7.8E+02 0.017 25.5 9.7 39 385-423 348-386 (628)
360 TIGR00927 2A1904 K+-dependent 22.8 2.3E+02 0.0049 31.4 6.4 7 165-171 954-960 (1096)
361 cd02433 Nodulin-21_like_2 Nodu 22.7 5.7E+02 0.012 23.1 15.8 26 408-433 188-213 (234)
362 PF11511 RhodobacterPufX: Intr 22.5 2.7E+02 0.0058 19.2 4.6 31 518-548 28-58 (67)
363 PF04226 Transgly_assoc: Trans 22.5 2.2E+02 0.0047 18.1 4.8 11 502-512 6-16 (48)
364 COG1079 Uncharacterized ABC-ty 22.4 6.6E+02 0.014 23.7 10.3 97 410-514 21-117 (304)
365 TIGR01667 YCCS_YHJK integral m 22.0 1E+03 0.022 25.8 11.3 30 416-445 43-76 (701)
366 PF07857 DUF1632: CEO family ( 21.7 2.6E+02 0.0057 25.6 5.9 19 99-117 181-199 (254)
367 PF11299 DUF3100: Protein of u 21.7 49 0.0011 29.3 1.2 91 164-255 128-229 (241)
368 PF07456 Hpre_diP_synt_I: Hept 21.6 2.7E+02 0.0058 23.0 5.3 50 150-205 68-117 (148)
369 COG1288 Predicted membrane pro 21.5 8.3E+02 0.018 24.5 10.9 101 171-280 132-236 (481)
370 TIGR01666 YCCS hypothetical me 21.4 1.1E+03 0.023 25.7 13.2 139 147-315 27-173 (704)
371 COG1079 Uncharacterized ABC-ty 21.3 7E+02 0.015 23.6 12.3 101 151-255 15-117 (304)
372 PF10183 ESSS: ESSS subunit of 21.3 1.6E+02 0.0034 22.6 3.8 37 512-548 51-87 (105)
373 PRK11875 psbT photosystem II r 21.2 1.4E+02 0.0031 16.8 2.5 11 278-288 18-28 (31)
374 PRK14212 camphor resistance pr 20.9 4.4E+02 0.0096 21.1 9.5 14 433-446 38-51 (128)
375 PRK14199 camphor resistance pr 20.7 4.5E+02 0.0097 21.0 9.4 13 433-445 41-53 (128)
376 PF01914 MarC: MarC family int 20.5 5.9E+02 0.013 22.4 8.5 62 478-540 26-88 (203)
377 PF01528 Herpes_glycop: Herpes 20.4 3.5E+02 0.0075 26.4 6.6 50 190-239 228-281 (374)
No 1
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-44 Score=342.44 Aligned_cols=447 Identities=31% Similarity=0.542 Sum_probs=373.4
Q ss_pred hHHHHHHHHHHHHHhhhcccccccccccccccC---CCCCCccccc--cchh----HHHHHHHHHHHHHHHHHHHHHHhh
Q 008615 97 SSVILPFLFPALGGLLFGYDIGATSGATISLQS---PELSGTTWFN--LSAV----QLGLVVSGSLYGALLGSILVYSIA 167 (559)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~s~~----~~g~~~s~~~l~~~i~~~~~g~l~ 167 (559)
++...+.+.++++.+-+||..+.+++....+.. +...+. +| +++. ..+.+.+++.+|.++|+++.|+++
T Consensus 7 ~~L~~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r--~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la 84 (485)
T KOG0569|consen 7 RRLLLAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIER--YGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLA 84 (485)
T ss_pred HHHHHHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHh--cCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566667779999999998887554432 111111 33 3433 357889999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHh---chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHH
Q 008615 168 DFLGRKRELIIAAVLYALGALTTAY---APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLG 244 (559)
Q Consensus 168 dr~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G 244 (559)
||+|||..++++.++..++.++..+ .+++.+++++|++.|+..|......+.++.|..|.+.||......+.+..+|
T Consensus 85 ~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g 164 (485)
T KOG0569|consen 85 DRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIG 164 (485)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHH
Confidence 9999999999998888887777766 4789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhc-ccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCc
Q 008615 245 ILLGYFVGSF-QINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDK 323 (559)
Q Consensus 245 ~~~g~~l~~~-l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (559)
..++..++.. +......|++.+.+..+++++..+...++||||+|+..+ +++.++|++.++++++..+.++
T Consensus 165 ~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~--------k~~~~~A~~sl~~y~G~~~~~~ 236 (485)
T KOG0569|consen 165 ILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIK--------KGDEEEARKALKFYRGKEDVEA 236 (485)
T ss_pred HHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHH--------cCCHHHHHHHHHHHhCCCcchh
Confidence 9999777643 343444899999999999999999999999999999985 5789999999999999876555
Q ss_pred hhhHHHHHHHHHhhhccccccccccchhhcccCchh-HHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHH
Q 008615 324 LSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLK-AFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVS 402 (559)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (559)
..+...++.. ++...+++..+++++++++..+ ...++..+....++.+.+...+|...++.+.|++. ..+.+..
T Consensus 237 ~~e~~~~e~~----~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~-~~a~~an 311 (485)
T KOG0569|consen 237 EIEEMLREIE----EEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTP-EEAQYAN 311 (485)
T ss_pred HHHHHHHHHH----HhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCH-HHHHHHH
Confidence 4433333222 2222334667899999998766 46666778888999999999999999999999998 8899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCc-h---hHHHHHHHHHHHHhhcccccccce
Q 008615 403 VVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGF-P---LVAVSALLLYVGCYQISFGPISWL 478 (559)
Q Consensus 403 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~ 478 (559)
...++..++..+++.++.||+|||++++.+..++.+..+++.......... . +..+...+++...++.+.+|+.+-
T Consensus 312 ~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~f 391 (485)
T KOG0569|consen 312 LGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWF 391 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHH
Confidence 999999999999999999999999999999999988888777655443332 2 234566777888899999999999
Q ss_pred eecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHhhhh
Q 008615 479 MVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSLEEIESKIL 558 (559)
Q Consensus 479 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (559)
+.+|++|++.|+.++++..+++++..++....+..+.+..|. ..|+.+.+.+++..++.++++||||+|+..|+.++++
T Consensus 392 i~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 392 IGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 8888999999999999999999999999999888766
Q ss_pred C
Q 008615 559 K 559 (559)
Q Consensus 559 ~ 559 (559)
|
T Consensus 471 ~ 471 (485)
T KOG0569|consen 471 K 471 (485)
T ss_pred h
Confidence 4
No 2
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.2e-43 Score=358.77 Aligned_cols=426 Identities=19% Similarity=0.202 Sum_probs=318.3
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHH
Q 008615 99 VILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELII 178 (559)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~ 178 (559)
.+.++++++++.+..+++...++..+|.+..+ ++++..+.+++.+++.++++++++++|+++||+|||+++++
T Consensus 165 ~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~-------~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii 237 (742)
T TIGR01299 165 QWALFFVLGLALMADGVEVFVVGFVLPSAEKD-------LCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLI 237 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHH
Confidence 34455666777788899888888888888766 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 179 AAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 179 ~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
+++++++++++++++++++.++++|+++|++.|+..+...+++.|++|+++|++.++++.+++.+|.++++.++..+...
T Consensus 238 ~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~ 317 (742)
T TIGR01299 238 CLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPH 317 (742)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999877655432
Q ss_pred C------------CcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCc-hh
Q 008615 259 V------------GGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDK-LS 325 (559)
Q Consensus 259 ~------------~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 325 (559)
. .+||+.+++.++++++.+++.+++||+|+|+..+ ++.+++.+.++++...+.... .+
T Consensus 318 ~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~~---------gr~~eA~~iL~~i~~~n~~~~~~~ 388 (742)
T TIGR01299 318 YGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLEN---------GKHDEAWMILKLIHDTNMRAKGHP 388 (742)
T ss_pred ccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHC---------CCHHHHHHHHHHHhcCCCCCcCch
Confidence 1 2799999999988888887888899999999874 567888888888876553321 11
Q ss_pred hHHH--HHHHH--Hhh---hcccccc----------------ccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHh
Q 008615 326 ERQI--EDTLV--SLK---SSYTDEK----------------SEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYY 382 (559)
Q Consensus 326 ~~~~--~~~~~--~~~---~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (559)
.... ..... ... +...... .+.+++++|+.+..+.. +...+.++....+++++..|
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~t-l~l~~~wf~~~~~yygl~~w 467 (742)
T TIGR01299 389 EKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREIT-IKLMGVWFTLSFGYYGLSVW 467 (742)
T ss_pred hHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 1110 00000 000 0000000 01135566665544444 44445556666677889999
Q ss_pred HHHHHHHc------------------------------------------CC-----C---------------C------
Q 008615 383 AGPILQSA------------------------------------------GF-----S---------------A------ 394 (559)
Q Consensus 383 ~~~~~~~~------------------------------------------~~-----~---------------~------ 394 (559)
.|.++.+. |+ . .
T Consensus 468 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (742)
T TIGR01299 468 FPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFK 547 (742)
T ss_pred HHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhh
Confidence 99876441 00 0 0
Q ss_pred ----------------------------------------------chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Q 008615 395 ----------------------------------------------AADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL 428 (559)
Q Consensus 395 ----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 428 (559)
.........+..++.+++.+++|+++||+|||++
T Consensus 548 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~ 627 (742)
T TIGR01299 548 NCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRM 627 (742)
T ss_pred ccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH
Confidence 0012344566778899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHH
Q 008615 429 LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVT 508 (559)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 508 (559)
+.++.++.+++++++.+. ......++..+++. ++..+..+....+++|++|++.|++++|+.+....+|++++|
T Consensus 628 l~~~~~lsai~~ll~~~~-----~s~~~ll~~~~l~g-~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp 701 (742)
T TIGR01299 628 LAGSMVLSCISCFFLSFG-----NSESAMIALLCLFG-GLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKAAAVLGI 701 (742)
T ss_pred HHHHHHHHHHHHHHHHHH-----ccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888887776642 12222333333333 333334456668899999999999999999999999999999
Q ss_pred HhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008615 509 FAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLS 549 (559)
Q Consensus 509 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (559)
++.+.+.+. +...+|++++++.++++++.+ ++||++++.
T Consensus 702 ~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~-~LPET~~~~ 740 (742)
T TIGR01299 702 LIFGSFVGI-TKAAPILFASAALACGGLLAL-KLPDTRGQV 740 (742)
T ss_pred HHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH-hCCCCcccc
Confidence 999988775 455677777777777666544 568988764
No 3
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.5e-41 Score=345.61 Aligned_cols=435 Identities=23% Similarity=0.291 Sum_probs=309.3
Q ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHH
Q 008615 101 LPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAA 180 (559)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~ 180 (559)
.++.+++++.+.++|+...++...+.+..+....+ .+.+..+.+++.+.+.+++.++++++|+++||+|||+++.+++
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~ 93 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGK--GPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHH
Confidence 34566777889999999998888887654322122 4567778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhchh------HhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhc
Q 008615 181 VLYALGALTTAYAPG------LGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSF 254 (559)
Q Consensus 181 ~~~~i~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 254 (559)
+++.++.++++++++ ++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|.++++.++..
T Consensus 94 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 94 IIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998765 78999999999999999999999999999999999999999999999999999988765
Q ss_pred ccC----------------------CCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHH
Q 008615 255 QIN----------------------AVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISAL 312 (559)
Q Consensus 255 l~~----------------------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (559)
+.. ...+||+.|.+.++++++.++..+++||||+|+..|++ +++++++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~--------~~~~a~~~~ 245 (502)
T TIGR00887 174 VLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAK--------DVEQAASDM 245 (502)
T ss_pred HHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCc--------chHHHHHHH
Confidence 421 01279999999988888887778889999999987521 122344444
Q ss_pred HhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC---chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH
Q 008615 313 GKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP---NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS 389 (559)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (559)
++..+.+..+..+ +.++ .+++ ++..+.+++++++++ +.++..+.....++.....++....|.|.++++
T Consensus 246 ~~~~~~~~~~~~~--~~~~----~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~ 317 (502)
T TIGR00887 246 SAVLQVKIEAEPD--EVEK----ASTA--VEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSA 317 (502)
T ss_pred HHHhccccccCcc--cccc----hhcc--ccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHH
Confidence 4443322111100 0000 0000 011123466777642 222233322233333322334566678888888
Q ss_pred cCCCCchh-----------HHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 390 AGFSAAAD-----------ATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 390 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
.|++.... .........++.+++.++.++++||+|||++++.+..+.++++.++....... . .....
T Consensus 318 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~-~-~~~~~ 395 (502)
T TIGR00887 318 IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL-S-THGFL 395 (502)
T ss_pred HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc-c-hhHHH
Confidence 88764211 01123334456677889999999999999999888877777766665432110 1 11112
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh----------cCchhhHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL----------LGAENIFLLFA 528 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~----------~g~~~~~~~~~ 528 (559)
...++...++..+..++.+.+..|.+|++.|+++.|+.+.++.++++++|.+.+.+.+. .++...+++++
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 475 (502)
T TIGR00887 396 AIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFA 475 (502)
T ss_pred HHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHH
Confidence 22222233334455667778889999999999999999999999999999999999884 34456778888
Q ss_pred HHHHHHHHHHHhhccCCCCCCHHHHHhh
Q 008615 529 AIAFLAVLFIVRTVPETKGLSLEEIESK 556 (559)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (559)
++++++.++ ++++||++++++||+++|
T Consensus 476 ~~~~~~~i~-~~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 476 LFMFLGILF-TLLIPETKGKSLEELSGE 502 (502)
T ss_pred HHHHHHHHH-heEeccCCCCCHHhhhCC
Confidence 887777664 467799999999888654
No 4
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=7.7e-40 Score=333.18 Aligned_cols=433 Identities=34% Similarity=0.569 Sum_probs=316.6
Q ss_pred HHHHHHHHHHhhhcccccccccccccccCCC---CCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHH
Q 008615 101 LPFLFPALGGLLFGYDIGATSGATISLQSPE---LSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELI 177 (559)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~ 177 (559)
.+.++++++.+.++++...+++..+.+.++. ...+ ++.+..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~ 89 (479)
T PRK10077 12 SITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLS--ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLK 89 (479)
T ss_pred HHHHHHHHHHHhcCcccceehHhHHHHHHHhccccccc--ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3445566778999999999998887766542 1222 5889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc------------hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHH
Q 008615 178 IAAVLYALGALTTAYA------------PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGI 245 (559)
Q Consensus 178 ~~~~~~~i~~~~~~~~------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~ 245 (559)
++.++++++.++++++ +.++.++++|+++|++.|...+...+++.|++|+++|++++++.+.+..+|.
T Consensus 90 ~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~ 169 (479)
T PRK10077 90 IAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQ 169 (479)
T ss_pred HHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHH
Confidence 9999999998888763 2356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccc--------CCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcC
Q 008615 246 LLGYFVGSFQI--------NAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRR 317 (559)
Q Consensus 246 ~~g~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (559)
++++.+++.+. ... +||+.|++.+++.++..+..+++||+|+|+..+ ++.+++++..++..+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~---------~~~~~~~~~~~~~~~ 239 (479)
T PRK10077 170 LVVYFVNYFIARSGDASWLNTD-GWRYMFASEAIPALLFLMLLYFVPETPRYLMSR---------GKQEQAEGILRKIMG 239 (479)
T ss_pred HHHHHHHHHHhccCcccccccC-ChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHc---------CCHHHHHHHHHHHcC
Confidence 99988766543 234 899999999888888777778899999887543 233344444444332
Q ss_pred CCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchh
Q 008615 318 RPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAAD 397 (559)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (559)
..+.. ...++.....+. +.. ..+..+. ..............+....+.+...++.|.+.++.|.+. ..
T Consensus 240 ~~~~~----~~~~~~~~~~~~---~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~~~-~~ 307 (479)
T PRK10077 240 NTLAT----QALQEIKHSLDH---GRK---TGGKLLM-FGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGAST-DI 307 (479)
T ss_pred ChhHH----HHHHHHHHHHHH---hhh---hhhhhcc-hhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCCCC-ch
Confidence 21110 001111000000 000 0011111 111122222233344445555667778899988888876 55
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccc
Q 008615 398 ATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISW 477 (559)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (559)
........++..+++.++.++++||+|||++++.+.++.+++.+++...... ...........+++.+++.....+..+
T Consensus 308 ~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (479)
T PRK10077 308 ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT-QAPGIVALLSMLFYVAAFAMSWGPVCW 386 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc-CcccHHHHHHHHHHHHHHhccccchhH
Confidence 6677777888899999999999999999999999998888887776543211 112222333333444444444556777
Q ss_pred eeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHH------HhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCHH
Q 008615 478 LMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLK------ELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSLE 551 (559)
Q Consensus 478 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (559)
.++.|.+|++.|++++|+.+....++.++++.+++.+. +..++...|++++++++++.++.+++.+|+|+++.+
T Consensus 387 ~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 466 (479)
T PRK10077 387 VLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLE 466 (479)
T ss_pred HHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccCCCCCHH
Confidence 89999999999999999999999999999887776544 567777888888888888888777888999999998
Q ss_pred HHHhhhh
Q 008615 552 EIESKIL 558 (559)
Q Consensus 552 ~~~~~~~ 558 (559)
|.+++++
T Consensus 467 ~~~~~~~ 473 (479)
T PRK10077 467 EMEALWE 473 (479)
T ss_pred HHHHHHh
Confidence 8877655
No 5
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=331.55 Aligned_cols=446 Identities=41% Similarity=0.630 Sum_probs=358.7
Q ss_pred HHHHHHHHHHHHHhhhccc--ccccccccccccCCCCCCccccccch--hHHHHHHHHHHHHHHHHHHHHHHhhhhhchH
Q 008615 98 SVILPFLFPALGGLLFGYD--IGATSGATISLQSPELSGTTWFNLSA--VQLGLVVSGSLYGALLGSILVYSIADFLGRK 173 (559)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr 173 (559)
..........++.+.+|++ .+..++....+..+....+ ...+. .+.+|+.+.+.++..++++++|+++|++|||
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~~~--~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk 119 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASLYD--LSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRIGRK 119 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccccc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 3445556677788888987 6666666666665432222 22233 5679999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhh
Q 008615 174 RELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGS 253 (559)
Q Consensus 174 ~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 253 (559)
+.++++.+++.++.+++++++|+++++++|+++|+|.|....+.+.+++|..|++.||...+..+....+|..++..++.
T Consensus 120 ~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~ 199 (513)
T KOG0254|consen 120 KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINY 199 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999977766
Q ss_pred cccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHH
Q 008615 254 FQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTL 333 (559)
Q Consensus 254 ~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (559)
...+...+||..+.+..+++++..+..+++||+|+|+.++ ++.+++++.+.++++..+.+.. .+..+..
T Consensus 200 ~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~---------g~~~~a~~~l~~l~g~~~~~~~--~~~~~~~ 268 (513)
T KOG0254|consen 200 GTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEK---------GRLEEAKRSLKRLRGLSPEDVE--VELELLK 268 (513)
T ss_pred hhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHc---------CChHHHHHHHHHHhCCCCcchH--HHHHHHH
Confidence 6543312899999999999999888888899999999984 7889999999999885422221 1111111
Q ss_pred HHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHH
Q 008615 334 VSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMT 413 (559)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (559)
..........+.+..+.++++....++..++..+..+.++++++...+|.+.+++..|..... .......++..+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~--~~~~~~~~~v~~~~t 346 (513)
T KOG0254|consen 269 IKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT--FLASIILGVVNFLGT 346 (513)
T ss_pred HHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch--HHHHHHHHHHHHHHH
Confidence 111111111122224566666456667888889999999999999999999999999988632 666777778888888
Q ss_pred HHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc-------CchhHHHHHHHHHHHHhhcccccccceeecccCCc
Q 008615 414 WIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILG-------GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPL 486 (559)
Q Consensus 414 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 486 (559)
+++.++.||+|||++++.+...+.++.++++....... ...+..+...+++...+..+..++.+.+..|.+|.
T Consensus 347 ~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~ 426 (513)
T KOG0254|consen 347 LVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPL 426 (513)
T ss_pred HHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcH
Confidence 99999999999999999999999999988887654432 23566777788888899999999999999999999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH-HHHhhccCCCCCCHHHHHhhhh
Q 008615 487 RTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVL-FIVRTVPETKGLSLEEIESKIL 558 (559)
Q Consensus 487 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 558 (559)
+.|+.+.++...++++...+....+..+.+..+....|..+++++.+... +.++++||+|+++++|+++.++
T Consensus 427 ~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 427 RLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred hHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHHHHH
Confidence 99999999999999999888877777777765545667777777776666 7888999999999999988664
No 6
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=6.5e-40 Score=334.76 Aligned_cols=441 Identities=36% Similarity=0.602 Sum_probs=321.4
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCC-CccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHH
Q 008615 99 VILPFLFPALGGLLFGYDIGATSGATISLQSPELS-GTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELI 177 (559)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~ 177 (559)
.+...+++.++.++.+++...+....+.+..+.-. .+..-+.+..+.+++.+++.++..++++++|+++||+|||++++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~ 105 (481)
T TIGR00879 26 VALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLL 105 (481)
T ss_pred HHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHH
Confidence 33445566667788888988888888777655100 00001244899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc---hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhh--
Q 008615 178 IAAVLYALGALTTAYA---PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVG-- 252 (559)
Q Consensus 178 ~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~-- 252 (559)
++.++++++.+++.+. .+++.++++|+++|++.+...+....++.|++|+++|++++++.+.+..+|.++++.++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~ 185 (481)
T TIGR00879 106 IIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSG 185 (481)
T ss_pred HHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999654 34568999999999999999999999999999999999999999999999999999999
Q ss_pred -hcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHH
Q 008615 253 -SFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIED 331 (559)
Q Consensus 253 -~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (559)
....... +||+.|++.++..++..+..+++||+|+++..++ +.++..+..++.....+...........
T Consensus 186 ~~~~~~~~-~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (481)
T TIGR00879 186 KVSLNNTL-GWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKG---------RVEEARKSLARLRGTSGEDKELLDELEL 255 (481)
T ss_pred hhcCCCCc-cHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcC---------ChHHHHHHHHHHhCCCCCcHHHHHHHHH
Confidence 6655555 9999999977777777777788999998765431 1122222222222222111111110000
Q ss_pred HHHHhhhccccccccccchhhcccC--chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHH
Q 008615 332 TLVSLKSSYTDEKSEGSFLEVFQGP--NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFK 409 (559)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (559)
.... ...+.+..+..+.+.++.. ..++..+...+.++..........++.|.++++.|++. ...+.......++.
T Consensus 256 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~ 332 (481)
T TIGR00879 256 IDIK--RSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAGVST-DHAFLVSIIVGAVN 332 (481)
T ss_pred HHHH--HHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcCCCc-hHHHHHHHHHHHHH
Confidence 0000 0000111111133333322 13444444555555555556667888899999999887 77888888899999
Q ss_pred HHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCc-----hhHHHHHHHHHHHHhhcccccccceeecccC
Q 008615 410 LVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGF-----PLVAVSALLLYVGCYQISFGPISWLMVSEIF 484 (559)
Q Consensus 410 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (559)
+++.++.+++.||++||+.+..+.++.+++++++.......... ....+...+++.++++.+..+....+..|.+
T Consensus 333 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (481)
T TIGR00879 333 FAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIF 412 (481)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccC
Confidence 99999999999999999999888777777766665322111111 3333444455555566666677777889999
Q ss_pred CccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCHHH
Q 008615 485 PLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSLEE 552 (559)
Q Consensus 485 p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (559)
|++.|++++|+.+...+++++++|.+.+.+.+..|+...|++.++++++++++.+++.+|+++++.+|
T Consensus 413 p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 413 PLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 99999999999999999999999999999999999999999999888888888777788888766543
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-40 Score=300.11 Aligned_cols=401 Identities=18% Similarity=0.130 Sum_probs=304.5
Q ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHH
Q 008615 101 LPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAA 180 (559)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~ 180 (559)
-++..+.++...+.+..-.++.+.|.+.++ .++|.+|+|++.+++.+.|+++.++.|.++||.++|+.+.+++
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~-------~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gL 101 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIED-------GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHH
Confidence 345566677777777777777777777766 8899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhh--hcccCC
Q 008615 181 VLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVG--SFQINA 258 (559)
Q Consensus 181 ~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l~~~ 258 (559)
++.++.+++++++++++.+.++.+++|..+|..+|.+...+..|+++++||+..++++++.++|..+.|++. +++..+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~ 181 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH 181 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998 887777
Q ss_pred CCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhh
Q 008615 259 VGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLK 337 (559)
Q Consensus 259 ~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (559)
. +||..|++.++++++..+.. +..+++|+-.-. +..|+. ++++ .+.. ++.+
T Consensus 182 ~-~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GL----------P~ie~~-------~~d~---------~e~~-~~~~ 233 (448)
T COG2271 182 G-GWRAAFYFPGIIAIIVALILLFLLRDRPQSEGL----------PPIEEY-------RGDP---------LEIY-EEEK 233 (448)
T ss_pred c-chhHHHHHHHHHHHHHHHHHHHHhCCCccccCC----------CCHHHh-------hcCc---------hhhh-hhhc
Confidence 7 99999999999998876655 557777741100 001110 0000 0000 0000
Q ss_pred hccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 008615 338 SSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAV 417 (559)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 417 (559)
+...-.....-++.+++||..|.+.+...+.+..-+ .+..|.|.|+.+...-+...+......+-+++++|.+++|
T Consensus 234 ~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~----gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~G 309 (448)
T COG2271 234 ENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRY----GINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAG 309 (448)
T ss_pred cCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHH----HHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHH
Confidence 000000111224567889988888777777776665 5889999999775444448899999999999999999999
Q ss_pred HHhhhc--CCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHH
Q 008615 418 AKVDDL--GRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISL 495 (559)
Q Consensus 418 ~l~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 495 (559)
+++||+ |||....+.+.+....+++..+. ..+.+......+++..|++..+..-+.-....|+.|++..|++.|+
T Consensus 310 wlSDklfkgrR~p~~~i~~~~i~~~~~~~w~---~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf 386 (448)
T COG2271 310 WLSDKLFKGRRGPMALIFMLLITASLVLYWL---APNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGF 386 (448)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHc---CCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhch
Confidence 999996 56655544333332222222221 2223344455555555555544444555678899999999999999
Q ss_pred HHHHHHH-HHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 496 AVLTNFG-SNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 496 ~~~~~~~-g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
...+.++ |++.+....|.+.|.+||...|+++.+.++++.+++....+
T Consensus 387 ~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 387 VGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred hhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999 99999999999999999999999888888877776655444
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.6e-38 Score=291.59 Aligned_cols=371 Identities=24% Similarity=0.253 Sum_probs=296.0
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 008615 104 LFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 183 (559)
+.+.++.|..+.+.......+|.+.++ +|+|..++|++.|+|.++++++.++...+.||+.||++++..+.++
T Consensus 16 ~aLa~~~F~igttEfv~~gLLp~iA~d-------l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lF 88 (394)
T COG2814 16 LALALAAFAIGTTEFVPVGLLPPIAAD-------LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALF 88 (394)
T ss_pred HHHHHHHHHHHhHHHHHHhchHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH
Confidence 445566788888888888899988888 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcch
Q 008615 184 ALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWR 263 (559)
Q Consensus 184 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 263 (559)
.++++++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+..++.++|.++|.++-+.. |||
T Consensus 89 i~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~-GWR 167 (394)
T COG2814 89 IVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF-GWR 167 (394)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh-hHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998888 999
Q ss_pred HHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccc
Q 008615 264 YMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTD 342 (559)
Q Consensus 264 ~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (559)
+.|++.++++++..+.. ..+| |+- ...+.
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~~------------------------------------------------~~~~~ 197 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PSE------------------------------------------------ISGSL 197 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--Ccc------------------------------------------------CCCCC
Confidence 99999999999877665 5577 210 00001
Q ss_pred ccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008615 343 EKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVD 421 (559)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 421 (559)
+.+..+..+++|+|..+..++...+.+..++ ....|...++++ .|++. ...++....++++.++|++++|++.|
T Consensus 198 ~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F----~~ftYi~P~L~~v~g~s~-~~vs~~Ll~~Gv~~~~Gn~~gGrl~d 272 (394)
T COG2814 198 PGPLRTLLRLLRRPGVLLGLLATFLFMTGHF----ALYTYIRPFLESVAGFSV-SAVSLVLLAFGIAGFIGNLLGGRLAD 272 (394)
T ss_pred CcchhHHHHHhcCchHHHHHHHHHHHHcchh----hhHHhHHHHHHHccCCCH-hHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 1112235677888887777665555544443 344555555554 56665 88999999999999999999999999
Q ss_pred hcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHH
Q 008615 422 DLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNF 501 (559)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 501 (559)
| +.++.+.....+.++..+.+.+.. .+.+..+....+ .++..............+.. ++.+..+.+++....+
T Consensus 273 r-~~~~~l~~~~~l~a~~~l~l~~~~----~~~~~~~~~~~~-wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~n 345 (394)
T COG2814 273 R-GPRRALIAALLLLALALLALTFTG----ASPALALALLFL-WGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFN 345 (394)
T ss_pred c-cchhHHHHHHHHHHHHHHHHHHhc----chHHHHHHHHHH-HHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHH
Confidence 9 888888888777777777766432 333333333333 22222222222223444433 4889999999999999
Q ss_pred HHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 502 GSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 502 ~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
+|..+|..+.|.+.|+.|+....++.+.+.+++.++.+...+.
T Consensus 346 lgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 346 LGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999998888888887766654443
No 9
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=3.1e-37 Score=312.76 Aligned_cols=394 Identities=18% Similarity=0.209 Sum_probs=267.4
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCccccccc--hh--HHHH--HHHHHHHHHHHHHHHHHHhhhhhchHHHH
Q 008615 103 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLS--AV--QLGL--VVSGSLYGALLGSILVYSIADFLGRKREL 176 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~--~~g~--~~s~~~l~~~i~~~~~g~l~dr~Grr~~~ 176 (559)
+....++.++++||...++...+.+.++ ++.+ +. .++. +.++.++++.++++++|+++||+|||+++
T Consensus 18 ~~~~~~g~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 90 (490)
T PRK10642 18 ITAASLGNAMEWFDFGVYGFVAYALGKV-------FFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKIL 90 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH
Confidence 3455678899999999988888877665 4322 21 1222 25788899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhHhH--------HHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHH
Q 008615 177 IIAAVLYALGALTTAYAPGLGV--------LLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLG 248 (559)
Q Consensus 177 ~~~~~~~~i~~~~~~~~~~~~~--------l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 248 (559)
.+++++++++++++++++|+++ ++++|+++|++.|..++...+++.|++|+++|+++.++...+..+|..+|
T Consensus 91 ~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg 170 (490)
T PRK10642 91 AITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLG 170 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 88999999999999999999999999999999999999998888888888
Q ss_pred HHhhhccc--------CCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCC
Q 008615 249 YFVGSFQI--------NAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPP 320 (559)
Q Consensus 249 ~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (559)
+.+...+. ..+ |||+.|++.++++++.+++...+||+|+|...+++. ++. ..+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~-gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~---------~~~-------~~~-- 231 (490)
T PRK10642 171 AGVVVLISTIVGEANFLDW-GWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKL---------EQG-------DRE-- 231 (490)
T ss_pred HHHHHHHHHhcCHHHhcCc-cHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhh---------hhh-------ccc--
Confidence 86654432 234 999999998877776666667789999875432100 000 000
Q ss_pred CCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHH
Q 008615 321 GDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADAT 399 (559)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 399 (559)
. ..+.++.++++++++ +.+........ .+.....++.+..|.|.++++ .+.+. ....
T Consensus 232 ------------------~-~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~l~~~~g~s~-~~~~ 289 (490)
T PRK10642 232 ------------------G-LQDGPKVSFKEIATK-HWRSLLTCIGL-VIATNVTYYMLLTYMPSYLSHNLHYSE-DHGV 289 (490)
T ss_pred ------------------c-ccccccCCHHHHHHH-hHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHH
Confidence 0 000112234555553 22222222222 222223344567788988854 57665 5566
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccccccccee
Q 008615 400 RVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLM 479 (559)
Q Consensus 400 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (559)
+......++.+++.++.|+++||+|||+.+..+.++..+....+.... ........+...++...+.+.. ......+
T Consensus 290 ~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~-~g~~~~~ 366 (490)
T PRK10642 290 LIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILI--NSNVIGLIFAGLLMLAVILNCF-TGVMAST 366 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH--hCCCHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 777777888999999999999999999988776654433322211111 1122222222222222222222 2233356
Q ss_pred ecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-chhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 480 VSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-AENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 480 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
..|.+|++.|+++.|+.+....+++.++|.+.+.+.+..+ +..++++..+.++++.+.. ++.||++++
T Consensus 367 ~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~-~~~pes~~~ 435 (490)
T PRK10642 367 LPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITG-VTMKETANR 435 (490)
T ss_pred HHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH-HHhccccCC
Confidence 6789999999999998766677778899999999988765 4445555555555554443 445776554
No 10
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.1e-37 Score=315.75 Aligned_cols=383 Identities=26% Similarity=0.341 Sum_probs=283.0
Q ss_pred cccc---hhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhh
Q 008615 138 FNLS---AVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAM 214 (559)
Q Consensus 138 ~~~s---~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 214 (559)
+|++ ..+.+++.+++.+++.++.+++|+++||+|||++++++.++.+++.++++++++++.++++|++.|++.+...
T Consensus 119 ~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~ 198 (505)
T TIGR00898 119 WDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIW 198 (505)
T ss_pred ecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchH
Confidence 9999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhh
Q 008615 215 HGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRA 294 (559)
Q Consensus 215 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~ 294 (559)
+...+++.|++|+++|+++.++...+..+|.++++.++..+. +||+.|++.+++.++..+..+++||+|+|+..+
T Consensus 199 ~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~----~wr~~~~~~~i~~~~~~~~~~~~~esp~~l~~~- 273 (505)
T TIGR00898 199 VQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP----DWRWLQLAVSLPTFLFFLLSWFVPESPRWLISQ- 273 (505)
T ss_pred HHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHHHHHhcCCChHHHHHC-
Confidence 999999999999999999999999999999999999987652 599999999999888877778899999998764
Q ss_pred ccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhh
Q 008615 295 VQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQIT 374 (559)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (559)
++.+++.+.+++....+......+. ...... ++.++++++..++++++++.++...+...+.++....
T Consensus 274 --------~~~~~a~~~l~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 341 (505)
T TIGR00898 274 --------GRIEEALKILQRIAKINGKKLPAEV-LSLSLE---KDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAF 341 (505)
T ss_pred --------CCHHHHHHHHHHHHHHcCCCCCHHH-Hhhhhh---hhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHH
Confidence 3444555555444433322211111 000000 0001112235678899998887776655554444322
Q ss_pred ChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCch
Q 008615 375 GQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFP 454 (559)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (559)
.++. .+.+....+.+ ........++..+++.++.+++.||+|||+.+.++.++.+++++++.... ....
T Consensus 342 ~~~~----~~~~~~~~~~~----~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~---~~~~ 410 (505)
T TIGR00898 342 SYYG----LVLDLGNLGGN----IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVP---VDLY 410 (505)
T ss_pred HHHH----HhccccccCCC----hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcC---CCch
Confidence 1211 22223333333 33444566778889999999999999999999988888777776665421 1212
Q ss_pred hHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHH
Q 008615 455 LVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLA 534 (559)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 534 (559)
+......++..++. ....+..+.+..|.+|++.|++++|+.++...+|++++|.+.+ + +..+...++.+++++.+++
T Consensus 411 ~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~ 487 (505)
T TIGR00898 411 FLRTALAVLGKFGI-TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLA 487 (505)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHH
Confidence 22222222222222 2333455688899999999999999999999999999999998 4 4456667777877777777
Q ss_pred HHHHHhhccCCCCCCHHH
Q 008615 535 VLFIVRTVPETKGLSLEE 552 (559)
Q Consensus 535 ~~~~~~~~~~~~~~~~~~ 552 (559)
.++. +++||+++++++|
T Consensus 488 ~~~~-~~lpet~~~~l~~ 504 (505)
T TIGR00898 488 GILT-LFLPETKGVPLPE 504 (505)
T ss_pred HHHH-HcCcCCCCCCCCC
Confidence 6654 4578998877653
No 11
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=7.3e-37 Score=302.09 Aligned_cols=361 Identities=19% Similarity=0.186 Sum_probs=269.6
Q ss_pred hhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH
Q 008615 111 LLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 190 (559)
+..........+.+|.+.++ +|++..++|++.+.+.+++.++++++|+++||+|||+++..+.++++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 91 (390)
T PRK03545 19 FIFNTTEFVPVGLLSDIAQS-------FHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLS 91 (390)
T ss_pred HHHHhHHHHHHcchHHHHhH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHH
Confidence 33333333444455666655 99999999999999999999999999999999999999999999999999999
Q ss_pred HhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhH
Q 008615 191 AYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSA 270 (559)
Q Consensus 191 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~ 270 (559)
++++|+++++++|+++|++.+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+.. |||+.|++.+
T Consensus 92 ~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~ 170 (390)
T PRK03545 92 ALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYL-GWRTTFLAIG 170 (390)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHh-cHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988877 9999999999
Q ss_pred HHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccc
Q 008615 271 PLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSF 349 (559)
Q Consensus 271 ~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (559)
+++++..+.. ..+||.|+ + + +....+.
T Consensus 171 ~~~~l~~~~~~~~~~~~~~---------~----~---------------------------------------~~~~~~~ 198 (390)
T PRK03545 171 GGALITLLLLIKLLPLLPS---------E----H---------------------------------------SGSLKSL 198 (390)
T ss_pred HHHHHHHHHHHHhCCCCCC---------C----C---------------------------------------cchHHHH
Confidence 8887765544 34555331 0 0 0000113
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Q 008615 350 LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL 428 (559)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 428 (559)
++.+|++.++.......+...... ....+.+.++++ .|.+. ..++.......++.+++.++.+++.||+++|..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~g~s~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~ 273 (390)
T PRK03545 199 PLLFRRPALVSLYLLTVVVVTAHF----TAYSYIEPFVQQVAGLSE-NFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL 273 (390)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCc-cHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH
Confidence 456777766654443333222222 233455555555 56665 678888888999999999999999999998764
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHH
Q 008615 429 LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVT 508 (559)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 508 (559)
. .+..+..++...+... ..+.+... ...+..+.......+.......+..| +.+++++|+.+...++|..+||
T Consensus 274 ~-~~~~~~~~~~~~l~~~----~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~ 346 (390)
T PRK03545 274 L-IAIALLLVCLLLLLPA----ANSEWHLS-VLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGA 346 (390)
T ss_pred H-HHHHHHHHHHHHHHHH----hchHHHHH-HHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHH
Confidence 3 3433333433333221 12222222 23333333333334444466677766 6889999999999999999999
Q ss_pred HhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 509 FAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 509 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
.+.|.+.|..|++..+.+.+++.+++.++.+...+
T Consensus 347 ~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 347 LLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999888888877766554
No 12
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=1.3e-36 Score=303.71 Aligned_cols=396 Identities=15% Similarity=0.129 Sum_probs=277.3
Q ss_pred HHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH
Q 008615 106 PALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYAL 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 185 (559)
..++.++..++...++..+|.+.++ +|++..+.|++.+.+.+++++++++.|+++||+|||+++.++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLAD-------LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHH
Confidence 3444555556665666677777665 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 186 GALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 186 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
+.++++++++++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|.++++.+++++.+.. |||+.
T Consensus 101 ~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~-gw~~~ 179 (434)
T PRK11663 101 INILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHY-GWRYG 179 (434)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988877 99999
Q ss_pred HhhhHHHHHHHHH-HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccc
Q 008615 266 YGLSAPLALLMGI-GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEK 344 (559)
Q Consensus 266 f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (559)
|++.++++++..+ ..++++|+|++...+ +..+.+ ++..+ .. ++..+.+.
T Consensus 180 f~~~~i~~~~~~~~~~~~~~~~p~~~~~~---~~~~~~---~~~~~------~~------------------~~~~~~~~ 229 (434)
T PRK11663 180 MMIAGIIAIVVGLFLCWRLRDKPQAMGLP---SVGEWR---HDALE------LA------------------QQQEGAGL 229 (434)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhhcCCC---Cccccc---ccccc------cc------------------hhccccCC
Confidence 9998887766544 445678876532100 000000 00000 00 00000000
Q ss_pred cccc-c-hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008615 345 SEGS-F-LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVD 421 (559)
Q Consensus 345 ~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 421 (559)
+... + ...++++.++...+...+..+. ...+..|.|.++. +.|++. .+++.......++.++++++.|++.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~p~~l~~~~g~s~-~~a~~~~~~~~~~~~~g~~~~g~l~d 304 (434)
T PRK11663 230 SRKEILTKYVLLNPYIWLLSFSYVLVYVV----RAAINDWGNLYMSETLGVDL-VTANSAVSMFELGGFIGALVAGWGSD 304 (434)
T ss_pred ChhhhHHHHHhcChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhccCCCH-HHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 0000 1 1245566555544433333322 2346678888885 457776 77888888899999999999999999
Q ss_pred hc--CCcchhh-hhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHH
Q 008615 422 DL--GRRPLLI-GGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVL 498 (559)
Q Consensus 422 ~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~ 498 (559)
|+ ++|+... ...+...+....+... ....... .....+..+++..+.......+..|.+|++.++++.|+.++
T Consensus 305 r~~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 380 (434)
T PRK11663 305 KLFNGNRGPMNLIFAAGILLSVGSLWLM---PFASYVM-QAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGL 380 (434)
T ss_pred HhccCCccHHHHHHHHHHHHHHHHHHHc---ccccHHH-HHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHH
Confidence 98 3333322 2222222222111111 1111222 22222222222222222223456799999999999999999
Q ss_pred HHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 499 TNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 499 ~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
..++|.+++|.+.|.+.|..|+...|.+.+++.+++.+..+...++++++
T Consensus 381 ~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 381 FAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhhhchh
Confidence 99999999999999999999999999999888888877666666555443
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=5.6e-37 Score=309.41 Aligned_cols=399 Identities=17% Similarity=0.101 Sum_probs=278.0
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHH
Q 008615 99 VILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELII 178 (559)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~ 178 (559)
.+.++.+..++.+....+...++...|.+.++ +|++..+.|++.+++.+++++++++.|+++||+|||+++.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~ 99 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMIST-------YGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPF 99 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHH
Confidence 44445566666677777888888888887776 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-----chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhh
Q 008615 179 AAVLYALGALTTAY-----APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGS 253 (559)
Q Consensus 179 ~~~~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 253 (559)
++++++++.++.++ +++++.++++|+++|++.+...+...+++.||+|+++|+++++++..+.++|.++++++..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~ 179 (467)
T PRK09556 100 LLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVAL 179 (467)
T ss_pred HHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHH
Confidence 88888877776665 6899999999999999999999999999999999999999999999999999999999887
Q ss_pred cccCCC--CcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHH
Q 008615 254 FQINAV--GGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIE 330 (559)
Q Consensus 254 ~l~~~~--~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (559)
++.... .+||..|.+.++++++..++. ++.+++|+... ..+. ++ . ..+....+
T Consensus 180 ~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~---------~~~~-~~---~---~~~~~~~~-------- 235 (467)
T PRK09556 180 WGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELG---------WGKA-EE---I---FGEPISEE-------- 235 (467)
T ss_pred HHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcC---------CCCh-hh---c---ccCccchh--------
Confidence 655432 269999998888877765554 44566654110 0000 00 0 00000000
Q ss_pred HHHHHhhhcccccccccc-chhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHH
Q 008615 331 DTLVSLKSSYTDEKSEGS-FLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVF 408 (559)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 408 (559)
+ +..+. ++...... .+..++++.++...+..++.... ...+..|.|.|+++ .|.+. .+++.......++
T Consensus 236 ~---~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~~p~yl~~~~g~s~-~~a~~~~~~~~~~ 306 (467)
T PRK09556 236 D---KETES-TDMTKWQIFVEYVLKNPVIWLLCFANIFLYIV----RIGIDNWSPVYAFQELGFSK-EDAINTFTLFEIG 306 (467)
T ss_pred h---hcccc-ccCcHHHHHHHHHHcChHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHccCCCH-HHHHHHHHHHHHH
Confidence 0 00000 00000000 12357777666555443333332 23467789988865 67776 7788888888899
Q ss_pred HHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccc
Q 008615 409 KLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRT 488 (559)
Q Consensus 409 ~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 488 (559)
.+++.++.|+++||++||+.+.....+..++..++... ...+.+...+. .+..+....+..........|.+|++.
T Consensus 307 ~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~p~~~ 382 (467)
T PRK09556 307 ALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQ---HATSEYMYLAS-LFALGFLVFGPQLLIGVAAVGFVPKKA 382 (467)
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHH---hcCcHHHHHHH-HHHHHHHHhhHHHHHHHHHHhhcchhh
Confidence 99999999999999999987765544433332222211 11222222222 222222221221122245669999999
Q ss_pred hhhHHHHHHHHHHH-HHHHHHHhhHHHHH------------hcCchhhHHHHHHHHHHHHHHHHhh
Q 008615 489 RGRGISLAVLTNFG-SNAIVTFAFSPLKE------------LLGAENIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 489 ~~~~~g~~~~~~~~-g~~i~~~i~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~ 541 (559)
+|++.|+.+..+++ |.+++|.+.|.+.| ..||...|.+.+++.+++.++.++.
T Consensus 383 ~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 383 IGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999886 77999999999999 5778889988887777776655443
No 14
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=4.1e-36 Score=297.55 Aligned_cols=392 Identities=18% Similarity=0.201 Sum_probs=271.8
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHH
Q 008615 102 PFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAV 181 (559)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~ 181 (559)
.+.+++++.++.++|...++...+.+.++ +|++..++|++.+++.+++++++++.|+++||+|||+++..+++
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~ 81 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKD-------LGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMV 81 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhh-------cCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHH
Confidence 34455566778888888888888877666 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC---
Q 008615 182 LYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA--- 258 (559)
Q Consensus 182 ~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--- 258 (559)
+++++++++++++|++.++++|+++|++.+...+....++.|++|+++|++++++++.+.++|.++++++++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 161 (412)
T TIGR02332 82 LWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGL 161 (412)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999887632
Q ss_pred --CCcchHHHhhhHHHHHHHHHH-hhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHH
Q 008615 259 --VGGWRYMYGLSAPLALLMGIG-MWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVS 335 (559)
Q Consensus 259 --~~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (559)
..|||+.|++.++++++..++ .+++||+|+.. +... .++.+...+..+....+.+.....
T Consensus 162 ~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~---------~~l~-~~~~~~~~~~~~~~~~~~~~~~~~------- 224 (412)
T TIGR02332 162 MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA---------KWLD-EEDKKALKEMIDNDQLTLEQPEGA------- 224 (412)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC---------CCCC-HHHHHHHHHHHHhccccccccccc-------
Confidence 129999999988888765544 46678887410 0000 001111111111100000000000
Q ss_pred hhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHc--CCCCchhHHHHHHHHHHHHHHHH
Q 008615 336 LKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSA--GFSAAADATRVSVVIGVFKLVMT 413 (559)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 413 (559)
.++ +....+..+++++ ++.++... +.+++.......+..|.|.++++. +.+. ..++.......++.+++.
T Consensus 225 ~~~--~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~-~~~~~~~~~~~l~~~~g~ 296 (412)
T TIGR02332 225 FAH--AAMPQRSMLREIF-TPAIMLYT----LAYFCLTNTLSAINIWTPQILQSFNQGSSN-IMIGLLAAIPQFCTIFGM 296 (412)
T ss_pred ccc--ccccHHHHHHHhc-ChHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcCCCCcH-HHhHHHhhHHHHHHHHHH
Confidence 000 0000011233333 34333332 223333334456788999999885 3444 678888899999999999
Q ss_pred HHHHHHhhhcCCcchh-hhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhH
Q 008615 414 WIAVAKVDDLGRRPLL-IGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRG 492 (559)
Q Consensus 414 ~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 492 (559)
++.|+++||+++|+.. .....+..++. ++... .......+...++. +.......+..+....|.+|++.|+++
T Consensus 297 l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~a 370 (412)
T TIGR02332 297 IWWSRHSDRLKERKHHTALPYLFAAAGW-LLASA----TDHNLIQLLGIIMA-SMGSFSAMAIFWTTPDQSISLQARAIA 370 (412)
T ss_pred HHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHh----cCCHHHHHHHHHHH-HHHhhhhhhHHHhhcccccchHHHHHH
Confidence 9999999999987753 33333333332 22211 11222222111111 111111223334555678899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhcC-chhhHHHHHHHH
Q 008615 493 ISLAVLTNFGSNAIVTFAFSPLKELLG-AENIFLLFAAIA 531 (559)
Q Consensus 493 ~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~ 531 (559)
.|+.+..+++|++++|.+.|.+.|..| |...+.+.+++.
T Consensus 371 ~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 371 IAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred HHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 999999999999999999999999886 777777665543
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=4.2e-36 Score=298.91 Aligned_cols=379 Identities=23% Similarity=0.257 Sum_probs=279.9
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 008615 100 ILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIA 179 (559)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~ 179 (559)
+..+.++.+..++++++....+...|.+.++ +|.++.+.+++.+++.++..+++++.|+++||+|||+++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 86 (406)
T PRK11551 14 ALTIGLCFLVALLEGLDLQSAGVAAPRMAQE-------FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVS 86 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHH
Confidence 3344555566788888888888888887766 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC
Q 008615 180 AVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV 259 (559)
Q Consensus 180 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 259 (559)
.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 166 (406)
T PRK11551 87 VALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDA 166 (406)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998877776
Q ss_pred CcchHHHhhhHHHHHHHHHH-hhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhh
Q 008615 260 GGWRYMYGLSAPLALLMGIG-MWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKS 338 (559)
Q Consensus 260 ~~wr~~f~~~~~~~~~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (559)
+||+.|++.+++.++..++ ..++||+|++...++ +.++ ..
T Consensus 167 -~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~~~------------------~~----------- 207 (406)
T PRK11551 167 -AWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAG---------AGKQ------------------RA----------- 207 (406)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccC---------cchh------------------hh-----------
Confidence 9999999988776665544 356788775321100 0000 00
Q ss_pred ccccccccccchhhcccC---chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHH
Q 008615 339 SYTDEKSEGSFLEVFQGP---NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWI 415 (559)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (559)
...+..++.+ ..+...+.. +...........|.|.++++.|.+. ...+.......++.+++.++
T Consensus 208 --------~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~~g~s~-~~~~~~~~~~~~~~~~~~~~ 274 (406)
T PRK11551 208 --------PVLRALFGEGRATATLLLWISY----FFTLIVLYFLLNWLPSLLVGQGLSR-SQAGLVQIAFNIGGALGSLL 274 (406)
T ss_pred --------hhHHHHhhhhhhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhCCCCh-hhhhHHHHHHHHHHHHHHHH
Confidence 0000111111 111111111 1111222346667889998888877 77888888999999999999
Q ss_pred HHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHH
Q 008615 416 AVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISL 495 (559)
Q Consensus 416 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 495 (559)
.|++.||+++|+.+..+.+...++++++... ...+... ...+..++...+..+...++..|.+|++.|+++.|+
T Consensus 275 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~ 348 (406)
T PRK11551 275 IGALMDRLRPRRVVLLIYAGILASLAALAAA-----PSFAGML-LAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGA 348 (406)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhc-----CcHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhH
Confidence 9999999999998887666555554444321 2222222 223333333333445556788999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhcCc-hhhHHHHHHHHHHHHHHHHhhcc
Q 008615 496 AVLTNFGSNAIVTFAFSPLKELLGA-ENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 496 ~~~~~~~g~~i~~~i~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
.+....+|..++|.+.|.+.+..+. ...++..+.+.+++.++.+...+
T Consensus 349 ~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 349 AVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred HHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999987653 34444444445454444444433
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=7.5e-36 Score=299.13 Aligned_cols=369 Identities=16% Similarity=0.173 Sum_probs=272.4
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 008615 104 LFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 183 (559)
..+.++.+..+++.....+..+.+.++ +|+++.+.+++.+++.+++.++++++|+++||+|||++++++.++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~ 93 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLIKAD-------LGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHH
Confidence 445566677788888878888877766 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcch
Q 008615 184 ALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWR 263 (559)
Q Consensus 184 ~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr 263 (559)
+++.++++++++++.++++|+++|++.+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.. +||
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~-~w~ 172 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAY-GWR 172 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccC-CHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998888777 999
Q ss_pred HHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccc
Q 008615 264 YMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDE 343 (559)
Q Consensus 264 ~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (559)
+.|++.++..++...+....||++++...+. +.+.+..+ ...+
T Consensus 173 ~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~---------------------~~~~~~~~----------------~~~~ 215 (426)
T PRK12307 173 AAFFVGLLPVLLVIYIRARAPESKEWEEAKL---------------------SGKGKHSQ----------------SAWS 215 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCChHHHHhhh---------------------hccccccc----------------cchh
Confidence 9999865544433333333566554321100 00000000 0000
Q ss_pred cccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 344 KSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
.....++++++++.++.......+.+. .+.....+..+.|.++++.+.+. ...+.......++.+++.++.+++.||+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~g~~~~g~l~dr~ 293 (426)
T PRK12307 216 VFSLSMKGLFNRAQFPLTLCVFIVLFS-IFGANWPIFGLLPTYLAGEGFDT-GVVSNLMTAAAFGTVLGNIVWGLCADRI 293 (426)
T ss_pred hhhHHHHHHHhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 011235677777766654443332222 22222235567888888888776 6778888888899999999999999999
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHH
Q 008615 424 GRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGS 503 (559)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 503 (559)
+||+.+..+.++..+..+.+... .......+....+..+....+..+....++.|.+|++.|++++|+.+....++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~ 369 (426)
T PRK12307 294 GLKKTFSIGLLMSFLFIFPLFRI----PQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATS 369 (426)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHH----ccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHH
Confidence 99998887776665554433321 11222222222222222222333344467789999999999999999999999
Q ss_pred HHHHHHhhHHHHHhcCchhh
Q 008615 504 NAIVTFAFSPLKELLGAENI 523 (559)
Q Consensus 504 ~~i~~~i~g~l~~~~g~~~~ 523 (559)
+.++|.+.|.+.+..|+...
T Consensus 370 ~~~gp~~~g~l~~~~g~~~~ 389 (426)
T PRK12307 370 GTFNSMAATWLGITMGLGAA 389 (426)
T ss_pred HHHHHHHHHHHHHcccHHHH
Confidence 99999999999999886544
No 17
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=3.5e-35 Score=289.48 Aligned_cols=360 Identities=16% Similarity=0.105 Sum_probs=269.8
Q ss_pred cccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHh
Q 008615 118 GATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLG 197 (559)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 197 (559)
..+++.+|.+.++ +|+|..+.|++.+.+.+++.+++++.|+++||+|||+++..++.+++++.++++++++++
T Consensus 26 ~~~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~ 98 (393)
T PRK09705 26 TSVGPLLPQLRQA-------SGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSA 98 (393)
T ss_pred hccchhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchH
Confidence 4556777877776 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHH
Q 008615 198 VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMG 277 (559)
Q Consensus 198 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~ 277 (559)
.++++|+++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++++.+...+||+.+.+.++..++..
T Consensus 99 ~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 99 LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVAL 177 (393)
T ss_pred HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 78999999999999999999999999887765489999877666555443
Q ss_pred HHhhccC-CchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC
Q 008615 278 IGMWSLP-PSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP 356 (559)
Q Consensus 278 ~~~~~~~-e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (559)
+..++.. +.|+ .+ +++ +...++.++++
T Consensus 178 ~~~~~~~~~~~~--------------------------------~~------------------~~~--~~~~~~~l~~~ 205 (393)
T PRK09705 178 FAWWWQSAREVA--------------------------------SS------------------HKT--TTTPVRVVFTP 205 (393)
T ss_pred HHHHHHhcCCCc--------------------------------cc------------------cCC--CcCCcccccCH
Confidence 3332221 1110 00 000 00123344555
Q ss_pred chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHH
Q 008615 357 NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGI 436 (559)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 436 (559)
..+...+...+.. ..+.....|.|.++++.+.+. ..++.......++.++++++.+++.||++||+....+..+.
T Consensus 206 ~~~~l~~~~~~~~----~~~~~~~~~lp~~l~~~g~s~-~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~ 280 (393)
T PRK09705 206 RAWTLGVYFGLIN----GGYASLIAWLPAFYIEIGASA-QYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQ 280 (393)
T ss_pred hHHHHHHHHHHHH----HHHHHHHHHHHHHHHHcCCCh-hhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHH
Confidence 5444433332222 233457778889998888776 78889999999999999999999999999999888887776
Q ss_pred HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccC-CccchhhHHHHHHHHHHHHHHHHHHhhHHHH
Q 008615 437 ALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIF-PLRTRGRGISLAVLTNFGSNAIVTFAFSPLK 515 (559)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 515 (559)
.++..++... ...... ... .+. +.......+.......+.. |++.+++..|+.+...++++.++|.+.|++.
T Consensus 281 ~~~~~~~~~~----~~~~~~-~~~-~l~-g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 281 LVGFCGFIWL----PLQLPV-LWA-MVC-GLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHHHHHHc----cchHHH-HHH-HHH-HHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665544321 111111 111 122 2222223333334444555 4678999999999999999999999999999
Q ss_pred HhcC-chhhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008615 516 ELLG-AENIFLLFAAIAFLAVLFIVRTVPETKGLS 549 (559)
Q Consensus 516 ~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (559)
|..| +...|.+.++++++..++.+.+.+|++.+.
T Consensus 354 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 354 SISGNYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred HHhCCchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 9987 666677777777777777777788877654
No 18
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4e-35 Score=293.06 Aligned_cols=375 Identities=21% Similarity=0.239 Sum_probs=253.2
Q ss_pred HHHHHHHHHhhhcccccccccccccccCCCCCCcccc---ccchhHHHH---HHHHHHHHHHHHHHHHHHhhhhhchHHH
Q 008615 102 PFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWF---NLSAVQLGL---VVSGSLYGALLGSILVYSIADFLGRKRE 175 (559)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~s~~~~g~---~~s~~~l~~~i~~~~~g~l~dr~Grr~~ 175 (559)
.+...+++.+++.+|...++...+.+.++ + +.+..+.+. +.++.+++..++++++|+++||+|||++
T Consensus 23 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~ 95 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYVYSFCSLYFAHI-------FFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKS 95 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH
Confidence 34455667788899998888887777665 4 345554444 4444555556999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhHh--------HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHH
Q 008615 176 LIIAAVLYALGALTTAYAPGLG--------VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILL 247 (559)
Q Consensus 176 ~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 247 (559)
+..++++++++++++++++++. .++++|+++|++.|..++...+++.|++|+++|+++.++...+...|.++
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~ 175 (432)
T PRK10406 96 MLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLL 175 (432)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999998874 58899999999999999999999999999999999999999888888888
Q ss_pred HHHhhhccc--------CCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCC
Q 008615 248 GYFVGSFQI--------NAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRP 319 (559)
Q Consensus 248 g~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (559)
++.++..+. ..+ |||++|++.++++++...+...+||+|++...+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~-gWr~~F~i~~~~~ll~~~~~~~~~e~~~~~~~~-------------------------- 228 (432)
T PRK10406 176 ALLVVVVLQQTLEDAELREW-GWRIPFALGAVLAVVALWLRRQLDETSQQETRA-------------------------- 228 (432)
T ss_pred HHHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHHHHHHHHHhcCCCCchHHHhh--------------------------
Confidence 887655432 134 999999998888877665555677766421000
Q ss_pred CCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhH
Q 008615 320 PGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADA 398 (559)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 398 (559)
.++..+++++++++..+...+...+ .....++.+..|.|.++++ .+.+. .+.
T Consensus 229 -----------------------~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~lp~~l~~~~g~s~-~~~ 281 (432)
T PRK10406 229 -----------------------LKEAGSLKGLWRNRRAFIMVLGFTA---AGSLCFYTFTTYMQKYLVNTAGMHA-NVA 281 (432)
T ss_pred -----------------------hcccccHHHHHhhHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcCCCH-HHH
Confidence 0001235566666544433322221 1112233466788888865 56665 667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccce
Q 008615 399 TRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWL 478 (559)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (559)
+.......++..++.++.|+++||++||+.+....++.++....+..... ........+....+...+.+ ...+....
T Consensus 282 ~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 359 (432)
T PRK10406 282 SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQ-NVSSPYAAFGLVMCALLIVS-FYTSISGI 359 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 77777777788888899999999999998876655543333222211111 11122222211211111111 12233457
Q ss_pred eecccCCccchhhHHHHHHHHHHH-HHHHHHHhhHHHHHhcC-chhhHHHHHHHHHHHHHHHHh
Q 008615 479 MVSEIFPLRTRGRGISLAVLTNFG-SNAIVTFAFSPLKELLG-AENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 479 ~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 540 (559)
+..|.+|++.|+++.|+.+...+. .+...|.+.+ +.+..| +...+++.+++.+++.+..++
T Consensus 360 ~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 360 LKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999987664 3445777777 446666 444455555555555554444
No 19
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.9e-42 Score=348.01 Aligned_cols=433 Identities=33% Similarity=0.564 Sum_probs=329.8
Q ss_pred HHHHHhhhcccccccccccccccC--CCCCCc-cc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHH
Q 008615 106 PALGGLLFGYDIGATSGATISLQS--PELSGT-TW-FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAV 181 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~ 181 (559)
+.++.+..||+...++...+.... ....++ ++ .+.+..+.+++.+...+|..+|++++|.++||+|||+.++++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 345567888888777655544441 111111 00 11145678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhch---hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 182 LYALGALTTAYAP---GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 182 ~~~i~~~~~~~~~---~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
+..+++++.++++ +++.++++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++..+...
T Consensus 85 ~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~ 164 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY 164 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 9999999999999999999999999999999999999999999999999999998887665332
Q ss_pred C--CcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHh
Q 008615 259 V--GGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSL 336 (559)
Q Consensus 259 ~--~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (559)
. .+||+.+++.++++++..+..+++||||+|+..| ++.+++++.++++++.+..++... +..++
T Consensus 165 ~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~---------~~~~~A~~~l~~~~~~~~~~~~~~----~~~~~- 230 (451)
T PF00083_consen 165 SDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSK---------GRDEEAEKVLRKLRGKEIEDEEIE----EIKAE- 230 (451)
T ss_pred cccccccccccccccccccccccccccccccceeccc---------cccccccccccccccccccccccc----ccccc-
Confidence 2 1599999999999988888888999999999875 555677777777554422221111 11111
Q ss_pred hhccccccccccchhhcccCc-hhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHH
Q 008615 337 KSSYTDEKSEGSFLEVFQGPN-LKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWI 415 (559)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (559)
..+.++.+..++++++++. .++..+...+..+....+.....+|.+.++++.+.++. ........+..+++.++
T Consensus 231 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~ 305 (451)
T PF00083_consen 231 --KKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS---FLATLILGLVNFLGTLL 305 (451)
T ss_pred --cccccccceeeeeccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccc
Confidence 1111112256778888765 34555555566666666767788888888888887763 34444555667778888
Q ss_pred HHHHhhhcCCcchhhhhHHHHHHHHHHHH-HHHHhhcC---chhHHHHHHHHHHHHhhcccccccceeecccCCccchhh
Q 008615 416 AVAKVDDLGRRPLLIGGVCGIALSLLLLS-AYYKILGG---FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGR 491 (559)
Q Consensus 416 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 491 (559)
+.++.||+|||++++.+..+.+++.+.++ ........ .....+...++....+..+..++.+.+..|++|++.|++
T Consensus 306 ~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~ 385 (451)
T PF00083_consen 306 AIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRST 385 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccc
Confidence 88999999999999998888887777664 11111111 133344444445556666777888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHhhh
Q 008615 492 GISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSLEEIESKI 557 (559)
Q Consensus 492 ~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (559)
+.|+...++.+++++++.+...+.+..+....+.++++++++..++.++++||+|+++++|+++++
T Consensus 386 ~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET~g~~l~ei~~~f 451 (451)
T PF00083_consen 386 GIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPETKGKTLEEIQEMF 451 (451)
T ss_pred ccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeCCCCCHHHHHhhC
Confidence 999999999999999999999988888756778888888888888889999999999999998864
No 20
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=5.2e-35 Score=261.04 Aligned_cols=391 Identities=18% Similarity=0.224 Sum_probs=290.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.+..|..++......|..+++..||.++|++|||+.+.+..+..++...+.+.++|+..+++.|.+.|+|.|+ .|..
T Consensus 108 w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~ 186 (528)
T KOG0253|consen 108 WGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVD 186 (528)
T ss_pred hchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHh
Confidence 789999999999999999999999999999999999999999999999999999999999999999999999998 8999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccC
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQG 297 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 297 (559)
.++-.|..|..+|...+-.. ..+.+|.++...+........ ||||.......+..+..+..+++||||||...+
T Consensus 187 ~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~-gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~---- 260 (528)
T KOG0253|consen 187 SAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNF-GWRYLLFTSSTPLMFAARFLVWVYESPRFYLAK---- 260 (528)
T ss_pred HHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHhHHHHHHHHHhhcccCcchhhhc----
Confidence 99999999999998887777 999999999999998888888 999999888888888888888999999999885
Q ss_pred CCchhhhHHHHHHHHHhhcCCCCCCchh---------hHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHH
Q 008615 298 KGSLQEYKEQAISALGKLRRRPPGDKLS---------ERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLV 368 (559)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (559)
++++++.+.++++.+.|...-.. ..+.++......+....++......+++.. .+++..+.....
T Consensus 261 -----G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp-~lrkttlllw~i 334 (528)
T KOG0253|consen 261 -----GDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSP-KLRKTTLLLWRI 334 (528)
T ss_pred -----CChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcCh-HHHHHHHHHHHH
Confidence 67777877777766554432110 011111000111111223334445566654 344333333333
Q ss_pred HHHHhhChhhHHHhHHHHHHHc--------------------CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Q 008615 369 LFQQITGQPSVLYYAGPILQSA--------------------GFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL 428 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 428 (559)
++.+-..++........+++.. ..+. .....-.....+..+.|.++.++++||+|||+.
T Consensus 335 wfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~-~~dYrdllitslaefPGlLIt~~iverlGRKkT 413 (528)
T KOG0253|consen 335 WFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSV-AKDYRDLLITSLAEFPGLLITGVIVERLGRKKT 413 (528)
T ss_pred HHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccc-hhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH
Confidence 3333222233333333333221 1111 222334555668889999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHH
Q 008615 429 LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVT 508 (559)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 508 (559)
+...+++++++.+++... ..........+..-.+..+++. +.+.|..|++|+..|+++.|.+..++.+|+++.|
T Consensus 414 Mal~l~~f~iflfll~~c-----~~rn~~tvllf~arafisg~fq-vaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p 487 (528)
T KOG0253|consen 414 MALSLILFGIFLFLLTTC-----KTRNAYTVLLFTARAFISGAFQ-VAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSP 487 (528)
T ss_pred HHHHHHHHHHHHHHHHHh-----cCcchhHHHHHHHHHHHhchhe-EEEEecCcccchhhhhcchhhhhhHHhhhhhhhh
Confidence 999999888887776653 2233334444444445554544 5679999999999999999999999999999999
Q ss_pred HhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCH
Q 008615 509 FAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSL 550 (559)
Q Consensus 509 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (559)
.+. +........+..+++++++++.+...++..|+|+|+.
T Consensus 488 ~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 488 VIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred HHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 988 4444455677788888999998888888889998864
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=4.3e-34 Score=289.91 Aligned_cols=395 Identities=15% Similarity=0.070 Sum_probs=280.4
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHH
Q 008615 100 ILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIA 179 (559)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~ 179 (559)
+..+..++++.++..+|..+++.++|.+..+ +|.+..+.+|+.+.|.++++++.+++|+++||+|||++++++
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~-------l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~ 77 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTLSMT-------LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLG 77 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3456677788899999999999999999877 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccC-CcccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 180 AVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETC-PSQIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 180 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
.++++++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.+.
T Consensus 78 ~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~ 157 (495)
T PRK14995 78 GTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH 157 (495)
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999888888887766 678999999999999999999999999999988
Q ss_pred CCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHH---HHHhhcCCCCCCchhhHHHHH---
Q 008615 259 VGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAIS---ALGKLRRRPPGDKLSERQIED--- 331 (559)
Q Consensus 259 ~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--- 331 (559)
. +|||.|++...++++..++. +++|+.+. ++.++.+..+....... ....+................
T Consensus 158 ~-gwr~~f~i~~~~~~~~~~l~~~~l~~~~~-----~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 231 (495)
T PRK14995 158 F-YWGSVFLINVPIVLVVMGLTARYVPRQAG-----RRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLT 231 (495)
T ss_pred C-ChHHHHHHHHHHHHHHHHHHHHhCCCCCC-----CCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHH
Confidence 7 99999999888877765544 55676542 00111111111000000 000111111111100000000
Q ss_pred ----HHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHH
Q 008615 332 ----TLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIG 406 (559)
Q Consensus 332 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 406 (559)
.......+. +.+.+.-..+++|++.+....+..+...... ....++.|.+++. .|+++ .++++...+..
T Consensus 232 ~~~~l~~f~~~e~-~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~lq~v~g~s~-~~ag~~~~~~~ 305 (495)
T PRK14995 232 GALLLGLFIRTQL-AASRPMIDMRLFTHRIILSGVVMAMTAMITL----VGFELLMAQELQFVHGLSP-LEAGMFMLPVM 305 (495)
T ss_pred HHHHHHHHHHHHh-cCCCCCcCHHHhCCcccHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCCH-HHHHHHHHHHH
Confidence 000000000 1111122246788877665554433333322 2456677888877 46665 89999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCc
Q 008615 407 VFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPL 486 (559)
Q Consensus 407 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 486 (559)
++..++.++.|++.||+++|+.+..+.++.+++.+++.... .....+......++.+.+.+. ..+.......+..|+
T Consensus 306 ~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~--~~~~~~~~~~~~~l~G~g~g~-~~~~~~~~~~~~~~~ 382 (495)
T PRK14995 306 VASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTD--FSTQQWQAWGLMALLGFSAAS-ALLASTSAIMAAAPP 382 (495)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHHhHHH-HHHHHHHHHHhcCCH
Confidence 99999999999999999999988888777776665554321 112222223233333333333 333334566778899
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008615 487 RTRGRGISLAVLTNFGSNAIVTFAFSPLKE 516 (559)
Q Consensus 487 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 516 (559)
++++.+.++.++.+.+|+.+|+.+.|.+.+
T Consensus 383 ~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 383 EKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998865
No 22
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=8.3e-34 Score=283.45 Aligned_cols=384 Identities=17% Similarity=0.161 Sum_probs=256.8
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCcccc-ccchhHHHHHH-----HHHHHHHHHHHHHHHHhhhhhchHHHH
Q 008615 103 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTWF-NLSAVQLGLVV-----SGSLYGALLGSILVYSIADFLGRKREL 176 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~-----s~~~l~~~i~~~~~g~l~dr~Grr~~~ 176 (559)
.....++.+++++|...++...+....++. + +.++. .+++. ++.+++..+++++.|+++||+|||+++
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l 97 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREF-----FPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHH
Confidence 445566778899998887766553322210 1 34444 34443 455677889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhHh--------HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHH
Q 008615 177 IIAAVLYALGALTTAYAPGLG--------VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLG 248 (559)
Q Consensus 177 ~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 248 (559)
+++.+++++++++++++++++ .++++|+++|++.|..++....++.|++|+++|++..+....+..+|.+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~ 177 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLS 177 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 588899999999999999999999999999999999999999999999998
Q ss_pred HHhhhcccC--------CCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCC
Q 008615 249 YFVGSFQIN--------AVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPP 320 (559)
Q Consensus 249 ~~l~~~l~~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (559)
..+...+.. .. |||++|++.+++.++...+....||+|+|...+++.+
T Consensus 178 ~~~~~~l~~~~~~~~~~~~-gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~~----------------------- 233 (438)
T PRK09952 178 TGLVSLISMMTTDEQFLSW-GWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQA----------------------- 233 (438)
T ss_pred HHHHHHHHHhCCHHHhhcc-ChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhcc-----------------------
Confidence 877665432 34 9999999988877665555556788887543210000
Q ss_pred CCchhhHHHHHHHHHhhhcccccccccc-chhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhH
Q 008615 321 GDKLSERQIEDTLVSLKSSYTDEKSEGS-FLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADA 398 (559)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 398 (559)
+.+++.+ .+.++++++.+...+.. .+......+....|.|.++++ .+.+. ...
T Consensus 234 ---------------------~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~y~~~~~g~s~-~~~ 288 (438)
T PRK09952 234 ---------------------AAKKRIPVIEALLRHPGAFLKIIAL---RLCELLTMYIVTAFALNYSTQNLGLPR-ELF 288 (438)
T ss_pred ---------------------cccccCCHHHHHHHchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCH-HHH
Confidence 0000001 11234444333332211 111122223455677777654 55554 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccce
Q 008615 399 TRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWL 478 (559)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (559)
.......++..+++.++.|+++||++||+.+..+.++..++.+.+.... ...+....+....+..++......+..++
T Consensus 289 ~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 366 (438)
T PRK09952 289 LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMAL--EAQSIFWIVFFSIMLANIAHDMVVCVQQP 366 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556677788889999999999999988877665544433332211 11222222222222222222222344567
Q ss_pred eecccCCccchhhHHHHHHHHH-HHHHHHHHHhhHHHHHhcC--chhhHHHHHHHHHHHHHHHHhhccC
Q 008615 479 MVSEIFPLRTRGRGISLAVLTN-FGSNAIVTFAFSPLKELLG--AENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 479 ~~~~~~p~~~~~~~~g~~~~~~-~~g~~i~~~i~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
+..|.+|++.|+++.|+.+... .+++.++|.+.+.+.+..+ |...+.+.+++.+++.+..+ ..++
T Consensus 367 ~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~-~~~~ 434 (438)
T PRK09952 367 MFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTAL-LMKD 434 (438)
T ss_pred HHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHH-Hccc
Confidence 8899999999999999976664 4888999999999998653 55666666666666655544 3454
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=6.1e-35 Score=282.74 Aligned_cols=348 Identities=18% Similarity=0.086 Sum_probs=246.0
Q ss_pred cccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHH
Q 008615 120 TSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVL 199 (559)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l 199 (559)
+++.+|.+.++ +|+|..+.|++.+++.+++.+++++.|+++||+|||++++.+++....+.+.....++++++
T Consensus 10 ~~~~lp~i~~~-------~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 10 FSPVLSLVAED-------IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHhhHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 44566666666 99999999999999999999999999999999999998776665555544433344799999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHH
Q 008615 200 LVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 200 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~ 279 (559)
+++|+++|++.+. .+.....+.|++|+++|++++++...+..+|.++++++++++.+.. |||+.|++.++++++..++
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~-gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG-GLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-chHHHHHHHHHHHHHHHHH
Confidence 9999999999986 5566666799999999999999999999999999999999998877 9999999988888776554
Q ss_pred h-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 280 M-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 280 ~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
. +++||+|++.. + ..+ . ++ ...+++++++++.+
T Consensus 161 ~~~~lp~~p~~~~------~----------------------~~~--~---~~-------------~~~~~~~ll~~~~~ 194 (368)
T TIGR00903 161 VLAALPALPFQAA------E----------------------GFG--F---KD-------------AVKEFGALAGRKDL 194 (368)
T ss_pred HHHHcCCCCCCCC------C----------------------Ccc--h---HH-------------HHHHHHHHHcChhH
Confidence 4 56888875210 0 000 0 00 00125678888877
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc---chhhh-hHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR---PLLIG-GVC 434 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~-~~~ 434 (559)
+...+..++..... +.+..|.|.++++.+++. . .+.......+.+.++ .+++.||..|| +.... ...
T Consensus 195 ~~~~~~~~~~~~~~----~~~~~wlp~~L~~~g~s~-~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 195 WIIGAILGFGVALF----DNLAIWLEAALRPAGLED-I-AGDAVALAILAGLIG---VAVIPDRVARAGLRSIYIRAAAL 265 (368)
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHCCCCh-H-HHHHHHHHHHHHHHH---HHHhhHHhhhhhhHHHHHHHHHH
Confidence 76665544444333 457789999998887664 3 455555544544444 47788877654 32222 222
Q ss_pred HHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHH
Q 008615 435 GIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPL 514 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l 514 (559)
+.++....+.. .......+... ...+++.....+..+++.+|.+|++.|+++.|+.+..+++++..+|.+.+.+
T Consensus 266 ~~a~~~~~~~~-----~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~ 339 (368)
T TIGR00903 266 LIAAFFLALAF-----ELNRLALFAFI-GIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLF 339 (368)
T ss_pred HHHHHHHHHHH-----ccccHHHHHHH-HHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHH
Confidence 22332222221 11222222222 2222333333344567889999999999999999999999999999999888
Q ss_pred HHhcCchhhHHHHHHHHHHHHHHHH
Q 008615 515 KELLGAENIFLLFAAIAFLAVLFIV 539 (559)
Q Consensus 515 ~~~~g~~~~~~~~~~~~~~~~~~~~ 539 (559)
.. |....|.++++..+++.+..+
T Consensus 340 ~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 340 IS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hc--CHHHHHHHHHHHHHHHHHHHH
Confidence 73 667788888888877777654
No 24
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=1.1e-34 Score=288.61 Aligned_cols=385 Identities=19% Similarity=0.202 Sum_probs=273.7
Q ss_pred ccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch
Q 008615 115 YDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP 194 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 194 (559)
++...++...|.+.++ +|.+..+.+++.+++.++..++.+++|+++||+|||+++.++.++.+++.+++++++
T Consensus 8 ~~~~~~~~~~~~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~ 80 (399)
T TIGR00893 8 LDRANLSFAAPMLQED-------LGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG 80 (399)
T ss_pred HHHHhhhHhHHHHHHh-------hCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc
Confidence 3444455555655555 999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHH
Q 008615 195 GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLAL 274 (559)
Q Consensus 195 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~ 274 (559)
+++.++++|+++|++.+...+....++.|++|+++|++++++.....++|..+++.+++.+.+.. +||+.|++.+++.+
T Consensus 81 ~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 159 (399)
T TIGR00893 81 AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF-SWQWAFIIEGVLGI 159 (399)
T ss_pred CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888877 89999999988887
Q ss_pred HHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhc
Q 008615 275 LMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVF 353 (559)
Q Consensus 275 ~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (559)
+..+.. ++.+|+|+. .+...++++ ....+..+.+ .+++.+++..+...++.+
T Consensus 160 ~~~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~ 212 (399)
T TIGR00893 160 IWGVLWLKFIPDPPQK---------AKWLTEEEK-YIVVGGLLAE-----------------QQGKGPSTPKKYQIKELL 212 (399)
T ss_pred HHHHHhhheecCCCCc---------cccCCHHHH-hhcchhhccc-----------------cccccccCCCccchHHHh
Confidence 766555 445655420 000000000 0000000000 000011122233466777
Q ss_pred ccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhh-
Q 008615 354 QGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIG- 431 (559)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~- 431 (559)
+++.++...+..++.... ...+..+.|.++++ .+.+. .+.+.......++.+++.++.+++.||++||+....
T Consensus 213 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 287 (399)
T TIGR00893 213 KDRRVWGLALGQFLVNIG----LGFFLTWFPTYLVQERGLSI-LEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVF 287 (399)
T ss_pred cCHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHhcccH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhH
Confidence 777665555444333332 23466677877765 45555 778888889999999999999999999999862211
Q ss_pred hHHHHHHHHHHHHHHHHhhc-CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHh
Q 008615 432 GVCGIALSLLLLSAYYKILG-GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFA 510 (559)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 510 (559)
......++.+.......... ........... ..+++..+..+....+..|.+|++.|+++.|+.+.+..+|..++|.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i 366 (399)
T TIGR00893 288 ARKTAIIAGLVLSLLMFATNYVNIPYAALALV-ALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIV 366 (399)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHHHHHHH-HHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHH
Confidence 11111111111111110111 11222222222 22233333566777899999999999999999999999999999999
Q ss_pred hHHHHHhcC-chhhHHHHHHHHHHHHHHHHh
Q 008615 511 FSPLKELLG-AENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 511 ~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 540 (559)
.|.+.+..| +...+.+.+++.+++.++.++
T Consensus 367 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 367 IGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred hhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 999999988 888888888777776665443
No 25
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=5.2e-34 Score=284.39 Aligned_cols=383 Identities=19% Similarity=0.221 Sum_probs=269.9
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q 008615 103 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVL 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 182 (559)
+..+.++.+..+++....+...+.+.++ +|++..+.+++.+++.++..+++++.|+++||+|||++++++.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEVAGE-------FGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 4455667788888888888888887766 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCC-c
Q 008615 183 YALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVG-G 261 (559)
Q Consensus 183 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-~ 261 (559)
.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|.++++.+++.+.+..+ +
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998876651 4
Q ss_pred chHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccc
Q 008615 262 WRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYT 341 (559)
Q Consensus 262 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (559)
||+.|++.++..++..+....+||++++...++ +.++.++..++..+..+.. +...
T Consensus 167 w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-------~~~~-------- 222 (405)
T TIGR00891 167 WRALFFISILPIIFALWLRKNIPEAEDWKEKHA---------GKALVRTMVDILYGGEHRI-------ANIV-------- 222 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhh---------hhhhhhhHHHHHhccchhh-------hhhh--------
Confidence 999999877777666666667888775432210 0000011111111000000 0000
Q ss_pred cccccccchhhcccCchhHHHH-HHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008615 342 DEKSEGSFLEVFQGPNLKAFII-GGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAK 419 (559)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 419 (559)
++.....++.. +..+.... ......+... .......+.|.++. +.+.+. .+.+.+.....++.+++.++.+++
T Consensus 223 -~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~s~-~~~~~~~~~~~~~~~~g~~~~g~l 297 (405)
T TIGR00891 223 -MTLAAAMVQSA--GKRWPTFVYLVVLVLFANL-YSHPIQDLLPTYLKADLGLSP-HTVANIVVFSNIGAIVGGCVFGFL 297 (405)
T ss_pred -hhhhHHhhhhh--hhhhHHHHHHHHHHHHHHH-HHhhhhhhhHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011111 11111111 1111111111 11234445666664 457666 788888889999999999999999
Q ss_pred hhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHH
Q 008615 420 VDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT 499 (559)
Q Consensus 420 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 499 (559)
.||++||+.+..+.++..+....+... ..+.+. +....+..++......+....++.|.+|++.|++++|+.+.+
T Consensus 298 ~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 372 (405)
T TIGR00891 298 GDWLGRRKAYVCSLLAGQLLIIPVFAI----GANVAV-LGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQL 372 (405)
T ss_pred HHHhCchhhhHHHHHHHHHHHHHHHHh----CCchHH-HHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHH
Confidence 999999998887766543332222211 122222 222222223333333445557889999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHhcC-chhhHHH
Q 008615 500 NFGSNAIVTFAFSPLKELLG-AENIFLL 526 (559)
Q Consensus 500 ~~~g~~i~~~i~g~l~~~~g-~~~~~~~ 526 (559)
..+++.++|.+.|.+.|..| |...+..
T Consensus 373 ~~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 373 GNLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHHhccccchhHHh
Confidence 99999999999999999998 6554443
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.5e-33 Score=277.48 Aligned_cols=344 Identities=19% Similarity=0.231 Sum_probs=252.7
Q ss_pred cccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHH
Q 008615 122 GATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLV 201 (559)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~ 201 (559)
+.+|.+.++ +|.++.+.|+..+++.++..+++++.|+++||+|||++++.+.++.+++.++++++++++.+++
T Consensus 41 ~~l~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
T PRK10213 41 SLLTPMAQD-------LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLI 113 (394)
T ss_pred hhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 345555555 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhh
Q 008615 202 GRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMW 281 (559)
Q Consensus 202 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 281 (559)
+|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|++++.+.+.. +||+.|++.++++++..+..+
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~l~~~~~l~~~ 192 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELI-GWRNVFNAAAVMGVLCIFWII 192 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998887 999999998877766554433
Q ss_pred -ccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhH
Q 008615 282 -SLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKA 360 (559)
Q Consensus 282 -~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (559)
..||.|+. +++.....++.+++|.++.
T Consensus 193 ~~~p~~~~~----------------------------------------------------~~~~~~~~~~~l~~~~~~~ 220 (394)
T PRK10213 193 KSLPSLPGE----------------------------------------------------PSHQKQNTFRLLQRPGVMA 220 (394)
T ss_pred HHCCCCCcc----------------------------------------------------cccchhHHHHHhcCHHHHH
Confidence 35554310 0000011335566766665
Q ss_pred HHHHHHHHHHHHhhChhhHHHh-HHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHH
Q 008615 361 FIIGGGLVLFQQITGQPSVLYY-AGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALS 439 (559)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 439 (559)
..+...+.+...+ ....+ .|.+.++.|++. ...+......+++.+++.++.+++.||.+ ++.+..+..+..+.
T Consensus 221 ~~~~~~~~~~~~~----~~~~~~~p~~~~~~g~s~-~~~g~~~~~~~~~~iig~~~~~~l~~r~~-~~~l~~~~~~~~~~ 294 (394)
T PRK10213 221 GMIAIFMSFAGQF----AFFTYIRPVYMNLAGFGV-DGLTLVLLSFGIASFVGTSLSSFILKRSV-KLALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHhccc-hhHHHHHHHHHHHH
Confidence 5443333332222 23334 477777788877 67888888899999999999999999954 44433333333332
Q ss_pred HHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Q 008615 440 LLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG 519 (559)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 519 (559)
.+.+... ....+......++. ++......+...+++.+..| +.++...++.....++|..+|+.+.|.+.|..|
T Consensus 295 ~~~l~~~----~~~~~~~~~~~~l~-G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g 368 (394)
T PRK10213 295 ALVLTLW----GSDKIVATGVAIIW-GLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALDNIG 368 (394)
T ss_pred HHHHHHH----hhhHHHHHHHHHHH-HHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2222211 12233333333333 33333334444456677777 556777788888889999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHH
Q 008615 520 AENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~ 537 (559)
+...+...+++.++..++
T Consensus 369 ~~~~~~~~~~~~~~~~~~ 386 (394)
T PRK10213 369 LTSPLMLSGTLMLLTALL 386 (394)
T ss_pred hhhHHHHHHHHHHHHHHH
Confidence 877777766665555443
No 27
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=7.4e-34 Score=284.15 Aligned_cols=358 Identities=20% Similarity=0.277 Sum_probs=241.5
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHH-HHHH-----HHHHHHHHHHHHHhhhhhchHHHH
Q 008615 103 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLV-VSGS-----LYGALLGSILVYSIADFLGRKREL 176 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~-~s~~-----~l~~~i~~~~~g~l~dr~Grr~~~ 176 (559)
...++++.+++.+|...++...|.+.++ ++.++.+.+.+ .+.. .++..+++++.|+++||+|||+++
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l 89 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-------FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGL 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHH
Confidence 4566678899999999999999988877 88877765543 3332 233357899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhHh--------HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHH
Q 008615 177 IIAAVLYALGALTTAYAPGLG--------VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLG 248 (559)
Q Consensus 177 ~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 248 (559)
+.+.+++++++++++++++++ .++++|+++|++.+...+....++.|++|+++|++++++...+.++|..++
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g 169 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFA 169 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 468899999999999999999999999999999999999999888888888
Q ss_pred HHhhhccc--------CCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCC
Q 008615 249 YFVGSFQI--------NAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPP 320 (559)
Q Consensus 249 ~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (559)
+.+++.+. +.. |||++|++..+...+........||++++...+ .
T Consensus 170 ~~~g~~l~~~~~~~~~~~~-gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~-----------------------~--- 222 (434)
T PRK15075 170 ALLGYLLNQWLSPAQMAEW-GWRIPFLIGCLIVPFIFLIRRSLEETEEFLARK-----------------------H--- 222 (434)
T ss_pred HHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhh-----------------------h---
Confidence 88777652 344 999999986544332222222233432210000 0
Q ss_pred CCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHH
Q 008615 321 GDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADAT 399 (559)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 399 (559)
+.+.+..++...+++ +..+...+..+.....+.....|.|.++++ .|.+. .+.+
T Consensus 223 ---------------------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~-~~~~ 277 (434)
T PRK15075 223 ---------------------RPSMREIFRSLAANW---RIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSA-ADSL 277 (434)
T ss_pred ---------------------ccccccHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHH
Confidence 000000011122222 122111122222233345677889999876 57776 6677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccccccccee
Q 008615 400 RVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLM 479 (559)
Q Consensus 400 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (559)
+...+..++.+++.++.|+++||++||+.+..+.++..+......... .............+..+.......+....+
T Consensus 278 ~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (434)
T PRK15075 278 LVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWL--VAAPSFARMLAVELWLSFLYGSYNGAMVVA 355 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH--HcCCchHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 888888899999999999999999999987766544332221111111 111222111111111111222233334467
Q ss_pred ecccCCccchhhHHHHHHHHHH-HHHHHHHHhhHHHHHhcCch
Q 008615 480 VSEIFPLRTRGRGISLAVLTNF-GSNAIVTFAFSPLKELLGAE 521 (559)
Q Consensus 480 ~~~~~p~~~~~~~~g~~~~~~~-~g~~i~~~i~g~l~~~~g~~ 521 (559)
..|.+|++.|+++.|+.+.+.. +++.++|.+.|.+.|..|+.
T Consensus 356 ~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 356 LTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 8899999999999999766555 45788999999999998864
No 28
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.2e-34 Score=286.08 Aligned_cols=354 Identities=16% Similarity=0.054 Sum_probs=264.9
Q ss_pred ccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhH
Q 008615 119 ATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGV 198 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 198 (559)
..++..|.+.++ +|++..++|++.+++.+++.++++++|+++||+|||+++.++.++.+++.++++++++++.
T Consensus 21 ~~~~~~~~~~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (377)
T TIGR00890 21 TWTLLAPPLGRY-------FGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAA 93 (377)
T ss_pred hhhhHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHH
Confidence 345566666665 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHH
Q 008615 199 LLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 199 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 278 (559)
++++|++.|++.+...+.....+.+++| ++|++++++...+.++|..+++++.+.+.+.. +||+.|++.++++++..+
T Consensus 94 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~~ 171 (377)
T TIGR00890 94 LYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLE-GVPAAFIYMGIIFLLVIV 171 (377)
T ss_pred HHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHH
Confidence 9999999999999888888888999987 57999999999999999988777766666666 999999999988887766
Q ss_pred Hhh-ccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCc
Q 008615 279 GMW-SLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPN 357 (559)
Q Consensus 279 ~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (559)
..+ +++++|+... +++. + .++++...++.++++.
T Consensus 172 ~~~~~~~~~~~~~~------------------------~~~~--~-------------------~~~~~~~~~~~~~~~~ 206 (377)
T TIGR00890 172 LGAFLIGYPPGQLI------------------------KTNI--E-------------------VSVKDYTVWEMLRTPQ 206 (377)
T ss_pred HHHHheecCchhcc------------------------ccCc--c-------------------cchhhhhHHHHHcCcc
Confidence 554 4444332000 0000 0 0000112345667776
Q ss_pred hhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHH
Q 008615 358 LKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIA 437 (559)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 437 (559)
++...+......+.. .....+.+.+.++.+.+. ...+.......++.++++++.|++.||++||+.+..+.++..
T Consensus 207 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 281 (377)
T TIGR00890 207 FWVLYLSFFLNAVSG----LLLIGLYKPYGQSLGLSD-GFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISA 281 (377)
T ss_pred HHHHHHHHHHHhHHH----HHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 665544333332222 123345556667777665 677888888999999999999999999999999888877777
Q ss_pred HHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008615 438 LSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL 517 (559)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 517 (559)
++.+.+.... .......+....+. +.......+....+..|.+|+++|+++.|+.+....+|..++|.+.|.+.+.
T Consensus 282 ~~~~~~~~~~---~~~~~~~~~~~~~~-g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 357 (377)
T TIGR00890 282 VGMAAMLFIP---MLNDVLFLATVALV-FFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTE 357 (377)
T ss_pred HHHHHHHHcc---cchhHHHHHHHHHH-HHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7766554321 11112221222222 2222233344456788999999999999999999999999999999999999
Q ss_pred cCchhhHHHHHHHHHHHH
Q 008615 518 LGAENIFLLFAAIAFLAV 535 (559)
Q Consensus 518 ~g~~~~~~~~~~~~~~~~ 535 (559)
.|+...|.+.+++.+++.
T Consensus 358 ~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 358 IGFEYTFIVTGAFALTSL 375 (377)
T ss_pred hchhhHHHHHHHHHHHhc
Confidence 999988888877766554
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=284.18 Aligned_cols=389 Identities=15% Similarity=0.115 Sum_probs=256.4
Q ss_pred HHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 008615 108 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGA 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 187 (559)
+.......+...++...|.+. + .|++..+.+++.+++.++++++++++|+++||+|||++++++.++++++.
T Consensus 36 ~~~~~~~~~~~~~~~~~p~l~-~-------~g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~ 107 (452)
T PRK11273 36 FGYAAYYLVRKNFALAMPYLV-E-------QGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVM 107 (452)
T ss_pred HHHHHHHHHHHHHHHhhHHHH-H-------cCCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHH
Confidence 344444444433444455443 2 37899999999999999999999999999999999999999999999999
Q ss_pred HHHHhch----hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHH-HHHHhhhcccCCCCcc
Q 008615 188 LTTAYAP----GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGIL-LGYFVGSFQINAVGGW 262 (559)
Q Consensus 188 ~~~~~~~----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~~~w 262 (559)
+++++++ +++.+++.|++.|++.+...+.....+.+++|+++|+++++++..+.++|.. .+++++..+.... +|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-gw 186 (452)
T PRK11273 108 LFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN-DW 186 (452)
T ss_pred HHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-cH
Confidence 9888763 7888999999999999988888888899999999999999999999999874 5555543333333 99
Q ss_pred hHHHhhhHHHHHHHHH-HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccc
Q 008615 263 RYMYGLSAPLALLMGI-GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYT 341 (559)
Q Consensus 263 r~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (559)
|+.|++.++++++..+ ..+++||+|+....+ . .++.++ +...... . ++. +
T Consensus 187 ~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~---------~-~~~~~~---~~~~~~~--------------~-~~~-~ 237 (452)
T PRK11273 187 HAALYMPAFAAILVALFAFAMMRDTPQSCGLP---------P-IEEYKN---DYPDDYN--------------E-KHE-Q 237 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCHhhcCCC---------C-hhhhhh---ccccccc--------------c-ccC-C
Confidence 9999998888777544 446678876521000 0 000000 0000000 0 000 0
Q ss_pred cccccccc-hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008615 342 DEKSEGSF-LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAK 419 (559)
Q Consensus 342 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 419 (559)
+.+.+..+ ..++|++.++...+...+..... +....|.|.++++ .+++. ..++....+..++.+++.++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~P~~l~~~~g~s~-~~~~~~~~~~~~~~~~g~~~~G~l 312 (452)
T PRK11273 238 ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR----YGILDWSPTYLKEVKHFAL-DKSSWAYFLYEYAGIPGTLLCGWM 312 (452)
T ss_pred CccHHHHHHHHHHcChHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011 23566776666555444443332 2466788999987 46665 677788888889999999999999
Q ss_pred hhhc--CCcchhhh-hHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHH
Q 008615 420 VDDL--GRRPLLIG-GVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLA 496 (559)
Q Consensus 420 ~d~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 496 (559)
+||+ +||..... ...+..++.+.+.. ....+.+...... +..+....+.......+..|.+|++.+|++.|+.
T Consensus 313 ~dr~~~~r~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~ 388 (452)
T PRK11273 313 SDKVFRGNRGATGVFFMTLVTIATIVYWL---NPAGNPTVDMACM-IVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFT 388 (452)
T ss_pred HHHHccCCcchHHHHHHHHHHHHHHHHHH---hcccChHHHHHHH-HHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHH
Confidence 9999 44443222 22222222222211 1112222222222 2222221121222224567899999999999999
Q ss_pred HHHHHHHHHH-HHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 497 VLTNFGSNAI-VTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 497 ~~~~~~g~~i-~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
+...++|+.+ +|.+.|.+.|..|+...|++.++++++++++...+.+
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 9988888765 7999999999999999999888887777665554443
No 30
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=1.9e-33 Score=276.55 Aligned_cols=368 Identities=15% Similarity=0.162 Sum_probs=263.7
Q ss_pred HHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH
Q 008615 106 PALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYAL 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 185 (559)
.++..+..+.......+.+|.+.++ +|.+..+.|++.+.+.+++.++++++|+++||+|||+++.++.++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~~~~-------~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 8 LALGTFGLGMAEFGIMGVLTELAHD-------VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVI 80 (382)
T ss_pred HHHHHHHHHhhHHHHHhChHHHHHH-------cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHH
Confidence 3344566666666777777777766 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 186 GALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 186 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
+.++++++++++.+++.|+++|++.+...+....++.|++++++|++++++...+..+|..+++++++++.+.. +||+.
T Consensus 81 ~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-gwr~~ 159 (382)
T PRK10091 81 GNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEF-SWRYT 159 (382)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhc-cHHHH
Confidence 99999999999999999999999999988888999999999999999999999999999999999999988877 99999
Q ss_pred HhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccc
Q 008615 266 YGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEK 344 (559)
Q Consensus 266 f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (559)
|++.+++.++..+.. +++||.++ + .+ .. .+
T Consensus 160 f~~~~~~~~~~~~~~~~~lp~~~~---------~----~~-----------------~~-----~~-------------- 190 (382)
T PRK10091 160 FLLIAVFNIAVLASIYFWVPDIRD---------E----AK-----------------GG-----LR-------------- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCc---------c----cc-----------------cC-----HH--------------
Confidence 999988877665543 45666431 0 00 00 00
Q ss_pred ccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 345 SEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
...+.++++..+.......+... +......+.+.++. ..|.+. ...+.......++.+++.++.+++.||+
T Consensus 191 ---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~~r~ 262 (382)
T PRK10091 191 ---EQFHFLRSPAPWLIFAATMFGNA----GVFAWFSYIKPYMMFISGFSE-TSMTFIMMLVGLGMVLGNLLSGRLSGRY 262 (382)
T ss_pred ---HHHHHhcChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHhHHHheecccc
Confidence 00123344443433222222111 11123334444554 467776 7888999999999999999999999999
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHH
Q 008615 424 GRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGS 503 (559)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 503 (559)
++|+.+..+..+.+++.+++.... +..+..+...++...+......+.......+..|++.++.+ ..+....+|
T Consensus 263 ~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g 336 (382)
T PRK10091 263 SPLRIAAVTDFIIVLALLMLFFFG----GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLG 336 (382)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHH----hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHH
Confidence 999998888777776665543321 12222222222222222222222222334454455555544 346678899
Q ss_pred HHHHHHhhHHHHHh-cCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 504 NAIVTFAFSPLKEL-LGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 504 ~~i~~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
.+++|.+.|.+.|. .++...+.+.++++++.......+.++
T Consensus 337 ~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (382)
T PRK10091 337 SAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRY 378 (382)
T ss_pred HHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999996 578888888777666665555444433
No 31
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=4.8e-33 Score=270.27 Aligned_cols=362 Identities=15% Similarity=0.112 Sum_probs=259.6
Q ss_pred cccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc----
Q 008615 118 GATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA---- 193 (559)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---- 193 (559)
...++..+.+.+++ +|+|.+|.+++.+++.++++++.++.|++.||+|.|+++.++.+++++.+++++++
T Consensus 51 ~~~~~l~~~~~~~~------~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~ 124 (462)
T PRK15034 51 MLFSAVTVNLNKIG------FNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNP 124 (462)
T ss_pred HHHHHHHHHhhhhh------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccc
Confidence 33444455554421 99999999999999999999999999999999999999999999999999999987
Q ss_pred -hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhccc-----CC---------
Q 008615 194 -PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQI-----NA--------- 258 (559)
Q Consensus 194 -~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-----~~--------- 258 (559)
++++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....++|..++++++..+. ..
T Consensus 125 ~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~ 203 (462)
T PRK15034 125 NTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQA 203 (462)
T ss_pred CCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 8999999999999998 6688999999999999999999999998777777776665554322 10
Q ss_pred ---CCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHH
Q 008615 259 ---VGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVS 335 (559)
Q Consensus 259 ---~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (559)
..+||..+++..++.++..++.+++.++++
T Consensus 204 ~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~----------------------------------------------- 236 (462)
T PRK15034 204 DGSVMSLANAAWIWVPLLAIATIAAWSGMNDIA----------------------------------------------- 236 (462)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcc-----------------------------------------------
Confidence 115888888888888777666654322211
Q ss_pred hhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHH
Q 008615 336 LKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWI 415 (559)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (559)
+.+.+..+..+.+|+|..|.+.+.+++.+. ++..+.++.|+++++ .++. ........+..+...+.+++
T Consensus 237 -----~~~~~~~~~~~vlk~~~~Wllslly~~tFG----~fvg~s~~lp~~~~~-~~~~-~~~l~~~~l~~l~~~l~rpl 305 (462)
T PRK15034 237 -----SSRASIADQLPVLQRLHLWLLSLLYLATFG----SFIGFSAGFAMLAKT-QFPD-VNILRLAFFGPFIGAIARSV 305 (462)
T ss_pred -----ccccCHHHHHHHhCCCchhHHHHHHHHHHH----HHHHHHHHHHHHHHH-HcCh-HHHHHHHHHHHHHHHHHHHh
Confidence 001111235568888887776655544333 334577788888866 3332 23333344556788899999
Q ss_pred HHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCch-hHHHHHHHHHHHHhhcccccccceeecccCCc--------
Q 008615 416 AVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFP-LVAVSALLLYVGCYQISFGPISWLMVSEIFPL-------- 486 (559)
Q Consensus 416 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------- 486 (559)
+|+++||+|+++++.++++++.++...+..........+ +.....++....+.+.+.. ..+-++.+.+|+
T Consensus 306 gG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gng-svfk~ip~~f~~~~~~~~~~ 384 (462)
T PRK15034 306 GGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSG-STFQMIAVIFRQITIYRVKM 384 (462)
T ss_pred hHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccch-HHHHhhHHHHhhhhhhcccc
Confidence 999999999999999888777776544433321111112 2222222222233333332 333556666663
Q ss_pred -------------cchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-chhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 487 -------------RTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-AENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 487 -------------~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
++.|.+.|+..+.+.+|+++.|.++|...+..| +...|+.+.+..+++.++.|..+.++
T Consensus 385 ~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y~r~ 457 (462)
T PRK15034 385 KGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVYGRR 457 (462)
T ss_pred cccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 157889999999999999999999999999877 66778888888888888887765443
No 32
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.5e-33 Score=279.75 Aligned_cols=361 Identities=22% Similarity=0.168 Sum_probs=256.9
Q ss_pred hhhcccccccccccccc-cCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHH
Q 008615 111 LLFGYDIGATSGATISL-QSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALT 189 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 189 (559)
++...+.++..+.++.. .++ +|.|+.++|++.+++.+++.+++++.|+++||+|||++++.+.++++++.++
T Consensus 25 ~~~~~~~~~~~~~l~~~i~~~-------~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (399)
T PRK05122 25 FISYLTIGLPLAVLPGYVHDQ-------LGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL 97 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------cCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH
Confidence 44444555556666653 334 8999999999999999999999999999999999999999999998887776
Q ss_pred HHhc--------hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCc
Q 008615 190 TAYA--------PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGG 261 (559)
Q Consensus 190 ~~~~--------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 261 (559)
+.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|.++|+.+++.+.+.. |
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g 176 (399)
T PRK05122 98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWG-G 176 (399)
T ss_pred HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcc-c
Confidence 6553 257789999999999999999999999999999999999999999999999999999999988877 9
Q ss_pred chHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccc
Q 008615 262 WRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYT 341 (559)
Q Consensus 262 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (559)
||+.+++.+++.++..+.....|+++. ++ .
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-----------------~-------------------- 206 (399)
T PRK05122 177 LAGLGLLIMLLALLGLLLARPRPAVPP-------------VK-----------------G-------------------- 206 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCC-------------CC-----------------c--------------------
Confidence 999988877665544433332332210 00 0
Q ss_pred cccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 008615 342 DEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVD 421 (559)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d 421 (559)
++.++++.+++ .+.......+..+. +.....+.+.++.+.+.+ ..+.......++.+++.++.+++.|
T Consensus 207 ---~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~~ 274 (399)
T PRK05122 207 ---ERLPFRRVLGR--VWPYGMGLALASIG----FGTIATFITLYYAARGWD---GAALALTLFGVAFVGARLLFGNLIN 274 (399)
T ss_pred ---cchhHHHHHHH--HHHHHHHHHHHHHH----HHHHHHHHHHHHHHcccc---cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001111111 11111111111111 123445666677666553 3455666778888999999999999
Q ss_pred hcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHH
Q 008615 422 DLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNF 501 (559)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 501 (559)
|+++|+.+..+..+.+++..++... .+.+..+....+.+.+.+ ...+.......|.+|++.|+++.|+.+....
T Consensus 275 r~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~G~~~~-~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 348 (399)
T PRK05122 275 RLGGLRVAIVSLLVEILGLLLLWLA-----PSPWMALIGAALTGFGFS-LVFPALGVEAVKRVPPQNRGAALGAYSVFLD 348 (399)
T ss_pred HhccHHHHHHHHHHHHHHHHHHHHh-----ccHHHHHHHHHHHHHhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999998888777777666555431 223333332222322222 2333433556688899999999999999999
Q ss_pred HHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 502 GSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 502 ~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
+|..+++.+.|.+.+..|++..+++.+++.+++.++.+++ +++++|
T Consensus 349 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 394 (399)
T PRK05122 349 LSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLL-YRRAPR 394 (399)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHh-cccccc
Confidence 9999999999999999999999998888887777655554 333333
No 33
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.7e-33 Score=283.29 Aligned_cols=399 Identities=15% Similarity=0.102 Sum_probs=271.1
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCC---------------ccccccchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008615 104 LFPALGGLLFGYDIGATSGATISLQSPELSG---------------TTWFNLSAVQLGLVVSGSLYGALLGSILVYSIAD 168 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d 168 (559)
.++.++......|...++.+.+.+..+.-.. +.+++++..+.|++.+++.+++.+++++.|+++|
T Consensus 22 ~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d 101 (465)
T TIGR00894 22 FLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIIIQIPVGYLAG 101 (465)
T ss_pred HHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHHHcchHHHHH
Confidence 3344444556667777776766665421110 0028999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHhc--hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHH
Q 008615 169 FLGRKRELIIAAVLYALGALTTAYA--PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGIL 246 (559)
Q Consensus 169 r~Grr~~~~~~~~~~~i~~~~~~~~--~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 246 (559)
|+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|.+
T Consensus 102 r~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 181 (465)
T TIGR00894 102 KYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTF 181 (465)
T ss_pred HhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887654 56888999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc-cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchh
Q 008615 247 LGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS-LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLS 325 (559)
Q Consensus 247 ~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (559)
+++++++.+.+...+||+.|++.++++++..+++++ .+|+|+.. . ..++.++ + ..++
T Consensus 182 i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~--------~-~~~~~~~-~-~i~~----------- 239 (465)
T TIGR00894 182 IFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIH--------P-CISKFEK-K-YINS----------- 239 (465)
T ss_pred HHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccC--------C-CCCHHHH-H-HHHh-----------
Confidence 999999998876239999999999988877666644 55555310 0 0000000 0 0000
Q ss_pred hHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHH
Q 008615 326 ERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVV 404 (559)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 404 (559)
..+++.++.+.+.+++++++++.++...+..+.... ....+..|.|.++++ .+.+. ...++....
T Consensus 240 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~lp~~l~~~~g~s~-~~~g~~~~~ 305 (465)
T TIGR00894 240 ---------SLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFW----LYTILPTYLPTFISWVLRVSG-KENGLLSSL 305 (465)
T ss_pred ---------hcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCcCh-HHhHHHHHH
Confidence 000000011123457788888776665544433333 334577788988866 56666 788888888
Q ss_pred HHHHHHHHHHHHHHHhhhcCCcchhhh---hHHHHHHHH---HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccce
Q 008615 405 IGVFKLVMTWIAVAKVDDLGRRPLLIG---GVCGIALSL---LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWL 478 (559)
Q Consensus 405 ~~~~~~~~~~~~g~l~d~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (559)
..++.+++.++.|+++||+++|+.... ..+...++. .+..+.........+..+..+++..++. ....+....
T Consensus 306 ~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 384 (465)
T TIGR00894 306 PYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVS-SGPLAGVLI 384 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh-hhhhhhhhh
Confidence 899999999999999999765432210 011111111 1111111111122222222222222222 222233334
Q ss_pred eecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc--C-chhhHHHHHHHHHHHHHHHHh
Q 008615 479 MVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL--G-AENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 479 ~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~ 540 (559)
...|..| +.+|.+.|+.++.+.+++.++|.+.|.+.+.. + |...|.+.+++.+++.++..+
T Consensus 385 ~~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 385 NSLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred chhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 5567766 58999999999999999999999999988753 3 667788877777777665444
No 34
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.1e-34 Score=287.23 Aligned_cols=375 Identities=16% Similarity=0.104 Sum_probs=280.8
Q ss_pred cccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh-----
Q 008615 118 GATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY----- 192 (559)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~----- 192 (559)
......+|....+ ++.+..+.|++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++.+.
T Consensus 34 ~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~ 106 (417)
T PRK10489 34 GLLGVAVPVQIQM-------MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLP 106 (417)
T ss_pred HHHHHHHHHHHHH-------HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcC
Confidence 3344455555544 7789999999999999999999999999999999999999988888877665542
Q ss_pred chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHH
Q 008615 193 APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPL 272 (559)
Q Consensus 193 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~ 272 (559)
.++++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+.. +|++.|++.++.
T Consensus 107 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~-~~~~~~~~~~~~ 185 (417)
T PRK10489 107 EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAG-GVAWNYGLAAAG 185 (417)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHH-hhHHHHHHHHHH
Confidence 5678999999999999999888999999999999999999999999999999999999999988776 899999998888
Q ss_pred HHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhh
Q 008615 273 ALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEV 352 (559)
Q Consensus 273 ~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (559)
.++..++.+.+|++++.. + + . .+. . ++.+..++.+
T Consensus 186 ~~~~~~~~~~l~~~~~~~-------~----~---------------~-~~~--~----------------~~~~~~~~~~ 220 (417)
T PRK10489 186 TFITLLPLLRLPALPPPP-------Q----P---------------R-EHP--L----------------RSLLAGFRFL 220 (417)
T ss_pred HHHHHHHHHhCCCCCCCC-------c----c---------------c-ccc--h----------------HHHHHHHHHH
Confidence 777766666677643200 0 0 0 000 0 0000123345
Q ss_pred cccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhh
Q 008615 353 FQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIG 431 (559)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 431 (559)
+++|.++...+...+..+ ......+.|.++++ .+.+. ...+++.....++.+++.++.+++.||.++++.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~p~~~~~~~g~~~-~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~ 294 (417)
T PRK10489 221 LASPVVGGIALLGGLLTM-----ASAVRVLYPALADEVWQMGA-AQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLL 294 (417)
T ss_pred HcChHHHHHHHHHHHHHH-----HHhHHHhhHHHHHhccCCCh-hHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHH
Confidence 566655444333222211 12355577888877 67766 778888889999999999999999999777777777
Q ss_pred hHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 432 GVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
+.++.+++.+++.. ...+.......+..+.......+...++..|..|++.||+++|+.+....+|..+++.+.
T Consensus 295 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~ 368 (417)
T PRK10489 295 STLGSFLAVGLFGL------MPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALL 368 (417)
T ss_pred HHHHHHHHHHHHHc------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHH
Confidence 77666666554432 112222222223333333333345557788999999999999999999999999999999
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHhhh
Q 008615 512 SPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSLEEIESKI 557 (559)
Q Consensus 512 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 557 (559)
|.+.+..|+...++..+++.++..++.+..+++.|+++.+|.+++.
T Consensus 369 G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (417)
T PRK10489 369 GGLGAMMTPVASASASGFGLLIIGVLLLLVLGELRRFRQTPPEVDA 414 (417)
T ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Confidence 9999999988888888888777777777888898988888887764
No 35
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.6e-33 Score=283.98 Aligned_cols=407 Identities=17% Similarity=0.207 Sum_probs=273.7
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q 008615 103 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVL 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 182 (559)
+..+.++.++.+++.....+.++.+..+ +|++..+.+++.+.+.+++.++.++.|+++||+|||++++++.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 94 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEVQGE-------FGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 3344456677777887877778877766 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 008615 183 YALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGW 262 (559)
Q Consensus 183 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 262 (559)
.+++.++++++++++.+++.|++.|++.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.. +|
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~w 173 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVW-GW 173 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877 99
Q ss_pred hHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccc
Q 008615 263 RYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTD 342 (559)
Q Consensus 263 r~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (559)
|+.|++.++..++.++....+||++++...++.+.+ . ++..+.....+. .....................
T Consensus 174 ~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 243 (496)
T PRK03893 174 RALFFIGILPIIFALWLRKNLPEAEDWKEKHAGKAP------V---RTMVDILYRGEH-RIINILLTLAAAAALWFCFAG 243 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhhhcccccc------c---hhHHHHHhcchh-HHHHHHHHHHHHHHHHHHHHh
Confidence 999988655555444444567777654222110000 0 000000000000 000000000000000000000
Q ss_pred ccccccch-------------h--hcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHH
Q 008615 343 EKSEGSFL-------------E--VFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIG 406 (559)
Q Consensus 343 ~~~~~~~~-------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 406 (559)
. ....+. . ....+..+..........+..+........+.|.+++ +.|.+. .+.+.+.....
T Consensus 244 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~-~~~g~~~~~~~ 321 (496)
T PRK03893 244 N-LQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDP-HTVANVLFFSG 321 (496)
T ss_pred h-hcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCH-HHHHHHHHHHH
Confidence 0 000000 0 0000011111111111112221112235567888885 677776 78899999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCc
Q 008615 407 VFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPL 486 (559)
Q Consensus 407 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 486 (559)
++.+++.++.|++.||+++|+.+..+..+..+..+.+... ............+..++...+..+....++.|.+|+
T Consensus 322 ~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (496)
T PRK03893 322 FGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAI----GGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDT 397 (496)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhc----cccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCH
Confidence 9999999999999999999998887765555444333221 112222222222222233333344555678899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHH
Q 008615 487 RTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFL 533 (559)
Q Consensus 487 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 533 (559)
+.|++++|+.+....+|+.++|.+.|.+.+..|+...+...++++.+
T Consensus 398 ~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 398 EQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTF 444 (496)
T ss_pred HHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988777665544433
No 36
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=7.1e-33 Score=273.72 Aligned_cols=366 Identities=15% Similarity=0.145 Sum_probs=265.7
Q ss_pred HHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH
Q 008615 106 PALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYAL 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 185 (559)
+.++.++.+.+....+...|.+.++ +|++..+.+++.+.+.+++.++++++|++.||+|||++++.+.++.++
T Consensus 12 ~~~~~~~~~~~~~~~g~~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i 84 (394)
T PRK03699 12 SFLSYALTGALVIVTGMVMGPIAEY-------FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMIL 84 (394)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3445566777777777778887766 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 186 GALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 186 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
+.++++++++++.++++|+++|++.+...+....++.|++|+++|+++++.......+|..++|.+.+.+.....+||+.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~ 164 (394)
T PRK03699 85 AVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWV 164 (394)
T ss_pred HHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988776543399999
Q ss_pred HhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccc
Q 008615 266 YGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKS 345 (559)
Q Consensus 266 f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (559)
|++.+++.++..++.++. +.|+. +++ .+++ +++.
T Consensus 165 f~~~~~~~~~~~~~~~~~-~~p~~------------~~~--------------~~~~------------------~~~~- 198 (394)
T PRK03699 165 YACIGLVYVAIFILTLFS-EFPAL------------GKH--------------APKA------------------DKPV- 198 (394)
T ss_pred HHHHHHHHHHHHHHHHhc-CCccc------------ccc--------------Cccc------------------cCcc-
Confidence 999888777665544432 22210 000 0000 0000
Q ss_pred cccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008615 346 EGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLG 424 (559)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 424 (559)
.++.+ ++.++...+..++ .......+..|.|.++++ .+.+. .+++.+.....++..+++++.+++.||++
T Consensus 199 ---~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~p~~l~~~~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr~~ 269 (394)
T PRK03699 199 ---AKEKW-GIGVLFLAIAALL----YILAQLTFISWVPEYAQKKFGMSL-EDAGNLVSNFWMAYMVGMWIFSFIVRFFD 269 (394)
T ss_pred ---ccccC-ChHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCh-HHhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00011 1222222222222 222233567789999855 57766 77888888888999999999999999999
Q ss_pred CcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHH
Q 008615 425 RRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSN 504 (559)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 504 (559)
+|+.+.....+..+.+.++.. ..+....... .+..++......+...++..+..| +.++...+.......+|.
T Consensus 270 ~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~ 342 (394)
T PRK03699 270 LQRILTVLAGLALVLMYLFVN-----TDDPSHLLYA-ILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGT 342 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHH-----cCCchHHHHH-HHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHH
Confidence 999887766655554443322 1222222222 222333333333444455566655 446778888888999999
Q ss_pred HHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHh
Q 008615 505 AIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 505 ~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 540 (559)
.++|.+.|.+.+..|+...+++.+++++++.+++..
T Consensus 343 ~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (394)
T PRK03699 343 MLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCIL 378 (394)
T ss_pred HHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHH
Confidence 999999999999999988888888777776554443
No 37
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=1e-32 Score=274.19 Aligned_cols=387 Identities=17% Similarity=0.114 Sum_probs=276.6
Q ss_pred hHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHH
Q 008615 97 SSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKREL 176 (559)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~ 176 (559)
++.++..+++.+..++..++...+.+.++.+.++ +|.+..+.++..+.+.+++.+++++.|+++||+|||+++
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l 81 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYIANDMIQPGMLAVVED-------FNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM 81 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHH
Confidence 4555666667777777777777777777777666 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 008615 177 IIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQI 256 (559)
Q Consensus 177 ~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 256 (559)
+++.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|.+++++......+|..+||.+++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~ 161 (406)
T PRK15402 82 LAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI 161 (406)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999888999999999999988
Q ss_pred CCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHH
Q 008615 257 NAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVS 335 (559)
Q Consensus 257 ~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (559)
+.. +||+.|++.+++.++..+.. +..||+++.. ++. . ..
T Consensus 162 ~~~-~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~----------------~--~~--------- 201 (406)
T PRK15402 162 HVL-PWRGMFVLFAALAALSFFGLWRAMPETAGRV------------GEK----------------L--SL--------- 201 (406)
T ss_pred Hcc-CccHHHHHHHHHHHHHHHHHHHhCCCCCccc------------ccc----------------c--cH---------
Confidence 876 99999999888887766544 4466643200 000 0 00
Q ss_pred hhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHH
Q 008615 336 LKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTW 414 (559)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (559)
++...+++.++++|.++...+...+...... ....+.|.++. ..+.++ .+.+.......++.+++.+
T Consensus 202 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~g~~~-~~~g~~~~~~~~~~~~g~~ 269 (406)
T PRK15402 202 -------KELGRDYKLVLKNRRFVAGALALGLVSLPLL----AWIALSPVILISGEQLSS-YEYGLLQVPVFGALIAGNL 269 (406)
T ss_pred -------HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHH----HHHHHhHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHH
Confidence 0001124566777766655544333332221 23445566654 467765 6677777777788899999
Q ss_pred HHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHH
Q 008615 415 IAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGIS 494 (559)
Q Consensus 415 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 494 (559)
+.+++.||+++|+.+..+.++..++.+++...........++.+....+...+.+.. .+......... +++++|++.+
T Consensus 270 ~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~-~~~~~~~~~~~-~~~~~g~~~~ 347 (406)
T PRK15402 270 TLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLA-NAGLYRLTLFS-SDVSKGTVSA 347 (406)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHH-hhhHHHHHhhh-ccccccHHHH
Confidence 999999999999998888777777666665432111122222222222232222222 22222333333 4488999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 495 LAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 495 ~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
+.+..+.++..+++.+.+.+.+..+........++..++..++...+.++
T Consensus 348 ~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK15402 348 AMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIFLKD 397 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999888775444444333333333333333433
No 38
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=3e-32 Score=268.16 Aligned_cols=357 Identities=16% Similarity=0.161 Sum_probs=263.0
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 008615 105 FPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYA 184 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 184 (559)
+..++.++.+.+.....+.+|.+..+ +|.|..++|++.+.+.+++.++++++|+++||+|||+++..+.++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~lp~~~~~-------~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 10 LLLCGLLLLTLAIAVLNTLVPLWLAQ-------EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455677778888888888888876 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchH
Q 008615 185 LGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRY 264 (559)
Q Consensus 185 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 264 (559)
++.++++++++++.++++|+++|++.+...+.....+.+..++++|+++++++..+.++|..+|+.+++.+.+.. .|..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~ 161 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL-MSVL 161 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cchH
Confidence 999999999999999999999999999988888888888999999999999999999999999999999987653 3333
Q ss_pred HHhhhHHHHHHHHHHhh-ccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccc
Q 008615 265 MYGLSAPLALLMGIGMW-SLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDE 343 (559)
Q Consensus 265 ~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (559)
.+ ..+........+.+ ..++++. ++
T Consensus 162 ~~-~~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------------~~ 187 (381)
T PRK03633 162 PW-VTGLVLAAILPLLFTRILNQQA-----------------------------------------------------EN 187 (381)
T ss_pred HH-HHHHHHHHHHHHHHhcccCCCC-----------------------------------------------------CC
Confidence 33 32222222111111 1111100 00
Q ss_pred cccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 344 KSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
++..+.++.++++.++..........+.. .....+.|.++++.+.+. ...+.......++.+++++..|++.||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lp~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 262 (381)
T PRK03633 188 HDSTSIWPMLKLRQARLGVNGCIISGIVL----GSLYGLMPLYLNHQGMSD-ASIGFWMALLVSAGILGQWPIGRLADRF 262 (381)
T ss_pred CCCCCHHHHHHhcchHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHhhhHHHHHHc
Confidence 00112445667766554333222222211 234557888888887776 6778888888899999999999999999
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHH
Q 008615 424 GRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGS 503 (559)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 503 (559)
++|+.+..+..+..++...+.. . ... .....+ .+.......|.......|..|+++++...+..+...++|
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~~------~-~~~-~~~~~l-~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG 333 (381)
T PRK03633 263 GRLLVLRVQVFVVILGSIAMLS------Q-AAM-APALFI-LGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVG 333 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHhh------h-HHH-HHHHHH-HHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 9999888777766665543321 1 111 111112 222222344556577788888888888888888889999
Q ss_pred HHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 504 NAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 504 ~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
..++|.+.|.+.|+.|+.+.|.+.+++.++..++
T Consensus 334 ~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 334 SLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999988888887777655543
No 39
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-32 Score=282.16 Aligned_cols=394 Identities=21% Similarity=0.216 Sum_probs=292.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+..+.....+..+++++|.++|++++|+++||+|||+++++++++..++.+++++++|++.+++.|+++|++.+....+.
T Consensus 113 ~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~ 192 (521)
T KOG0255|consen 113 VCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVG 192 (521)
T ss_pred eeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHh
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccC
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQG 297 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 297 (559)
..++.|++++++|+.++.+ ......++.+++++++++.. +||+.+++..+++++.++..++.||+|||+..+
T Consensus 193 ~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~~l~~Es~rwl~~~---- 264 (521)
T KOG0255|consen 193 FGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLWFLPPESPRWLLSK---- 264 (521)
T ss_pred HhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHHHccCcChHHHHHc----
Confidence 9999999999999999999 77777777888888887765 899999999999998888877778999999985
Q ss_pred CCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChh
Q 008615 298 KGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQP 377 (559)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (559)
++.+++.+.+++....++.......................+++..+.++++.|+++...+...+.++.....++
T Consensus 265 -----g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~ 339 (521)
T KOG0255|consen 265 -----GRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYY 339 (521)
T ss_pred -----CchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHH
Confidence 556777777777655442222222222221111111112223345688899988666555544444433222111
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
+. +......| ..........+..........+...|++|||.....+..+..++++..++.... ...+..
T Consensus 340 gl----~~~~~~lg----~~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 409 (521)
T KOG0255|consen 340 GL----SLNVSGLG----GNIYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDD--LGGWLH 409 (521)
T ss_pred hh----hhhhhhcC----chHHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhcc--chhHHH
Confidence 11 11222223 244555555666788888888999999999999999999999998888875431 111233
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
.+...+..++...++... +.+..|++|+..|..+.+.......++++++|.+...... ......+.+++.+..+.+++
T Consensus 410 ~~~~~~~~~~~~~~~~~~-~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~ 487 (521)
T KOG0255|consen 410 WILPLLGKFFIGSAFNLI-FLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLL 487 (521)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHH
Confidence 444444444444444444 6889999999999999999999999999999987754444 33333344457777777777
Q ss_pred HHhhccCCCCCCHHHHHhh
Q 008615 538 IVRTVPETKGLSLEEIESK 556 (559)
Q Consensus 538 ~~~~~~~~~~~~~~~~~~~ 556 (559)
...++||++++.+.+..++
T Consensus 488 ~~~~lpet~~~~l~~t~~~ 506 (521)
T KOG0255|consen 488 SLLLLPETKGKPLPGTLLD 506 (521)
T ss_pred HHhcCcccCCCCCchhHHH
Confidence 7788999999887655443
No 40
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.4e-35 Score=268.96 Aligned_cols=445 Identities=22% Similarity=0.297 Sum_probs=318.6
Q ss_pred ccchhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccc-cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008615 92 EAFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTW-FNLSAVQLGLVVSGSLYGALLGSILVYSIADFL 170 (559)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~ 170 (559)
....|+... .+.++.++.+.++||...++...+-+..-+..+++. =+.++...+.+..+..+|..+|++++|+++||+
T Consensus 33 ~g~qw~~fk-~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~ 111 (538)
T KOG0252|consen 33 EGLQWKHFK-AIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKF 111 (538)
T ss_pred cchhHHHHH-HHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 334555544 456788899999999998887777665544332210 125667788999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhch-------hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHH
Q 008615 171 GRKRELIIAAVLYALGALTTAYAP-------GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVL 243 (559)
Q Consensus 171 Grr~~~~~~~~~~~i~~~~~~~~~-------~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 243 (559)
|||+++...++++.+++++++++. -++++.+.|++.|+|.|+-+|...++.+|...+++||...+...+..++
T Consensus 112 GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~ 191 (538)
T KOG0252|consen 112 GRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGF 191 (538)
T ss_pred cchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecch
Confidence 999999999999999999888853 2578889999999999999999999999999999999999998888888
Q ss_pred HHHHHHHhhhcccC----CC----------CcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHH
Q 008615 244 GILLGYFVGSFQIN----AV----------GGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAI 309 (559)
Q Consensus 244 G~~~g~~l~~~l~~----~~----------~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~ 309 (559)
|...|.+++..+.. .. .=||..|.+.++++++.+...+.+||+++|..... ++.+.+.
T Consensus 192 GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~--------~~~~~a~ 263 (538)
T KOG0252|consen 192 GILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVS--------KKLKQAA 263 (538)
T ss_pred hHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhh--------cCHhhhh
Confidence 88887777655431 11 14999999999999998888899999999864331 1111111
Q ss_pred HHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH
Q 008615 310 SALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS 389 (559)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (559)
++.+...+. ..++...........++....+...+..+ .-..+++.+..++..-..++....+...++++
T Consensus 264 ---~d~~k~~~~------~~~~~~~~~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ 333 (538)
T KOG0252|consen 264 ---GDMKKVLSV------DIEAESTAESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSA 333 (538)
T ss_pred ---hcccccccc------ccchhhccccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHh
Confidence 111111100 00000000000000111111133333322 22556666777777767777788888889988
Q ss_pred cCCCCchhHH-------H-HHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHH
Q 008615 390 AGFSAAADAT-------R-VSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSAL 461 (559)
Q Consensus 390 ~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (559)
.++.+..+.. . -..+...+.+.|..+...++|++||++..+.+++++.+..+.++..+... .......+..
T Consensus 334 ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~-~~~~Gf~v~y 412 (538)
T KOG0252|consen 334 IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQL-ENTIGFVVLY 412 (538)
T ss_pred hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccc-cccCceeehH
Confidence 8876633222 1 12222233344666777889999999999999999999888887643211 1222233344
Q ss_pred HHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH-----hcCchhhHHHHHHHHHHHHH
Q 008615 462 LLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE-----LLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~-----~~g~~~~~~~~~~~~~~~~~ 536 (559)
.+...+...+.+.....+.+|.+|++.|++..|+..+.+..|++++...+.++.+ ..|..+++++++++++++.+
T Consensus 413 ~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~ 492 (538)
T KOG0252|consen 413 SLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGIL 492 (538)
T ss_pred HHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHh
Confidence 4455566667777788999999999999999999999999999999999999999 78889999999999988887
Q ss_pred HHHhhccCCCCCCHHHHHhhh
Q 008615 537 FIVRTVPETKGLSLEEIESKI 557 (559)
Q Consensus 537 ~~~~~~~~~~~~~~~~~~~~~ 557 (559)
+.+ ++||+++++++|++++.
T Consensus 493 ~T~-l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 493 FTL-LIPETKGKSLEEISNEE 512 (538)
T ss_pred eeE-EeecccccCHHHhcChh
Confidence 654 46699999999986654
No 41
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=2.4e-32 Score=270.38 Aligned_cols=351 Identities=18% Similarity=0.152 Sum_probs=249.6
Q ss_pred cccccccccccc-cCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHH---
Q 008615 116 DIGATSGATISL-QSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTA--- 191 (559)
Q Consensus 116 ~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~--- 191 (559)
..+...+.+|.. .++ +|.+..++|++.+++.+++.++++++|+++||+|||++++.+.++..++.+.+.
T Consensus 30 ~~~~~~p~l~~~l~~~-------lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~ 102 (392)
T PRK12382 30 TVGLPLPVIPLFVHHD-------LGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAA 102 (392)
T ss_pred HHHHHhhhhhHHHHHh-------cCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhh
Confidence 344555555543 334 899999999999999999999999999999999999999999888777654332
Q ss_pred h-----chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHH
Q 008615 192 Y-----APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMY 266 (559)
Q Consensus 192 ~-----~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 266 (559)
+ .++++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+||++++++.+.. |||+.+
T Consensus 103 ~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~-g~~~~~ 181 (392)
T PRK12382 103 ILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHF-GFAALA 181 (392)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHH
Confidence 2 3588999999999999999999999999999999999999999999999999999999999988777 999887
Q ss_pred hhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccccc
Q 008615 267 GLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSE 346 (559)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (559)
++..+..++........||.+. + + +. +
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~---------~--------------------~-~~-----------------------~ 208 (392)
T PRK12382 182 LTTMVLPLLAWAFNGTVRKVPA---------H--------------------A-GE-----------------------R 208 (392)
T ss_pred HHHHHHHHHHHHHHHhccCCCC---------C--------------------c-cc-----------------------C
Confidence 7665554433332222222110 0 0 00 0
Q ss_pred ccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 008615 347 GSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR 426 (559)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 426 (559)
.+.++.++. .+...+...+... .......+.+.++++.+.+. .+.......++.+++.++.|++.||+++|
T Consensus 209 ~~~~~~~~~--~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~~r~g~~ 279 (392)
T PRK12382 209 PSLWSVVGL--IWKPGLGLALQGV----GFAVIGTFVSLYFASKGWAM---AGFTLTAFGGAFVLMRVLFGWMPDRFGGV 279 (392)
T ss_pred chHHHHHHH--HHHhHHHHHHHHH----HHhHHHHHHHHHHHhcCCch---hHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 001111110 1111111111111 12234556677777766543 45556667778889999999999999999
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHH
Q 008615 427 PLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAI 506 (559)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 506 (559)
+.+..+..+.+++.+++... .+.+..+....+. +.......+.......|.+|+++|+++.|+.+....+|..+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~-g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 353 (392)
T PRK12382 280 KVAIVSLLVETVGLLLLWLA-----PTAWVALAGAALT-GAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGV 353 (392)
T ss_pred eehHHHHHHHHHHHHHHHHc-----ccHHHHHHHHHHH-HHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99988887777776654431 2223222222222 22222233444466678889999999999999999999999
Q ss_pred HHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhc
Q 008615 507 VTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTV 542 (559)
Q Consensus 507 ~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 542 (559)
+|.+.|.+.|..|+...|.+.+++.+++.++.+...
T Consensus 354 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 354 SGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999998888887777665543
No 42
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=4.1e-33 Score=279.41 Aligned_cols=371 Identities=13% Similarity=0.104 Sum_probs=256.3
Q ss_pred cccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHH
Q 008615 120 TSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVL 199 (559)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l 199 (559)
++..++.+..+ +|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.++++++++++++++.+
T Consensus 38 ~~~~~~~i~~~-------~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l 110 (455)
T TIGR00892 38 VTVFFKELQQI-------FQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIEL 110 (455)
T ss_pred hhhhHHHHHHH-------hCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHH
Confidence 34455555555 99999999999999999999999999999999999999999999999999999999999988
Q ss_pred HH-HHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHH
Q 008615 200 LV-GRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 200 ~~-~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 278 (559)
++ .|+++|++.+...+....++.++++ ++|++++++...+..+|..++|++++.+.+.. |||+.|++.+++.++..+
T Consensus 111 ~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~-gwr~~f~~~~~~~~~~~v 188 (455)
T TIGR00892 111 YLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESF-GWRGSFLILGGLLLHCCV 188 (455)
T ss_pred HHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHH
Confidence 75 5799999999877777888899995 78999999999999999999999999988877 999999999988876655
Q ss_pred Hhhcc-CCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCc
Q 008615 279 GMWSL-PPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPN 357 (559)
Q Consensus 279 ~~~~~-~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (559)
..+++ ++.+.... .+.++ . +...... .. .... .....++..+....++++++.
T Consensus 189 ~~~~~~~~~~~~~~-----------~~~~~-~---~~~~~~~--~~-~~~~--------~~~~~~~~~~~~~~~~~~~~~ 242 (455)
T TIGR00892 189 CGALMRPVGPSQRV-----------SKSKS-K---EGLPPDG--ST-KKLS--------KKSTAEKINRFLDFSLFTHRG 242 (455)
T ss_pred HHHHhCCCCccccc-----------ccccc-c---ccCCCCC--cc-cccc--------ccchhhhhhhhcchHHhcCch
Confidence 54443 22111000 00000 0 0000000 00 0000 000000000111124677777
Q ss_pred hhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc--CCcchhhhhH--
Q 008615 358 LKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL--GRRPLLIGGV-- 433 (559)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~~~~-- 433 (559)
++...+..++..+.. .....+.+.++++.+++. ..++....+.+++.++++++.+++.||. ++++......
T Consensus 243 ~~~~~~~~~l~~~~~----~~~~~~l~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 317 (455)
T TIGR00892 243 FLVYLSGNVIMFLGF----FAPIIFLVPYAKDKGVDE-YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFAL 317 (455)
T ss_pred HHHHHHHHHHHHHHc----cchHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHH
Confidence 665554443333322 235567788888888876 7888899999999999999999999974 3333333322
Q ss_pred HHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHH
Q 008615 434 CGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSP 513 (559)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~ 513 (559)
++.+++.+++.. ..+.+. +....+..++......+...+++.|.+|++++++++|+.+....+|.+++|.+.|.
T Consensus 318 ~~~~l~~ll~~~-----~~~~~~-~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~ 391 (455)
T TIGR00892 318 LFNGLTHLLCAL-----AGDYTG-LVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGR 391 (455)
T ss_pred HHHHHHHHHHHH-----hchHHH-HHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceee
Confidence 222222222211 122332 22333333333334445556778899999999999999999999999999999999
Q ss_pred HHHhcC-chhhHHHHHHHHHHHHH
Q 008615 514 LKELLG-AENIFLLFAAIAFLAVL 536 (559)
Q Consensus 514 l~~~~g-~~~~~~~~~~~~~~~~~ 536 (559)
+.+..| +...|++.+++.+++.+
T Consensus 392 l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 392 LVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred eehhcCCcchHHHHhhHHHHHHHH
Confidence 999885 87888887776666554
No 43
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=2e-32 Score=275.89 Aligned_cols=362 Identities=14% Similarity=0.114 Sum_probs=239.2
Q ss_pred ccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhH
Q 008615 119 ATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGV 198 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~ 198 (559)
...+..+.+.++ +|++..+.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.
T Consensus 54 ~~~~~~~~l~~~-------~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~ 126 (476)
T PLN00028 54 AAAPLLPIIRDN-------LNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATG 126 (476)
T ss_pred HHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 344556666655 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhccc----CC----CCcchHHHhhhH
Q 008615 199 LLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQI----NA----VGGWRYMYGLSA 270 (559)
Q Consensus 199 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~----~~----~~~wr~~f~~~~ 270 (559)
++++|+++|++.+... ....++.|++|+++|++++++.....++|..+++.+.+.+. .. ..|||+.|++.+
T Consensus 127 l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g 205 (476)
T PLN00028 127 FIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPG 205 (476)
T ss_pred HHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHH
Confidence 9999999999988654 45667899999999999999998877777777766554432 11 128999999999
Q ss_pred HHHHHHHHHhhccCC-chHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccc
Q 008615 271 PLALLMGIGMWSLPP-SPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSF 349 (559)
Q Consensus 271 ~~~~~~~~~~~~~~e-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (559)
+++++..++.+++++ .|+ ++.++.+ ++.+ .++.+....+
T Consensus 206 ~l~l~~~l~~~~~~~~~p~--------------~~~~~~~-------~~~~-------------------~~~~~~~~~~ 245 (476)
T PLN00028 206 LLHIIMGILVLTLGQDLPD--------------GNYRELK-------KSGT-------------------MPKDSFSKVL 245 (476)
T ss_pred HHHHHHHHHHHHHcCcCCC--------------CchhhHH-------hcCc-------------------cccccHHHHH
Confidence 988877666655543 221 0000000 0000 0000001124
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc-
Q 008615 350 LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRP- 427 (559)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~- 427 (559)
++.++++..+...+..++..... ..+..+.|.++.+ .|++. ..++.+.....++.++++++.|+++||++||+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~l~~~~g~s~-~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~ 320 (476)
T PLN00028 246 RYGVTNYRTWILALTYGYSFGVE----LTMDNIIAEYFYDRFGLSL-ETAGAIAASFGLMNLFARPAGGYLSDVAARRFG 320 (476)
T ss_pred HHHHcCchhHHHHHHHHHHHHHH----HHHHhHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcC
Confidence 55667776665544333322222 2355567777654 57776 77888999999999999999999999998652
Q ss_pred ----h--hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHH
Q 008615 428 ----L--LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNF 501 (559)
Q Consensus 428 ----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 501 (559)
. .....++.++.++++.. ..+....+...+++..+...+ .+..+.+..+..| +.+|++.|+.+..+.
T Consensus 321 ~~~r~~~~~~~~~l~~i~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~g~ 393 (476)
T PLN00028 321 MRGRLWALWIVQTLGGVFCIWLGR-----ANSLGAAIVVMILFSIFVQAA-CGATFGIVPFVSR-RSLGVISGLTGAGGN 393 (476)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcc-----cchHHHHHHHHHHHHHHHHHh-hhhhcccCcccCh-hhchhhhhhhhcccc
Confidence 1 11122222222221111 122222222222222222222 2233455666654 789999999888777
Q ss_pred HHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhh
Q 008615 502 GSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 502 ~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 541 (559)
+|+.+++.+.+ ..+..+|...|++.+++.+++.++.++.
T Consensus 394 lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 394 VGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 77777776654 1123357788888887877776655443
No 44
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=2.7e-32 Score=273.16 Aligned_cols=375 Identities=16% Similarity=0.148 Sum_probs=255.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc----hhHhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA----PGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----~~~~~l~~~r~l~G~~~g~~ 213 (559)
+|++..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++. .+++.+++.|++.|++.+..
T Consensus 56 ~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~ 135 (438)
T TIGR00712 56 QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMG 135 (438)
T ss_pred cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcc
Confidence 68999999999999999999999999999999999999999999999998888764 46778889999999999999
Q ss_pred hhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHH-HhhccCCchHHHHH
Q 008615 214 MHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGI-GMWSLPPSPRWLLL 292 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~p~~~~~ 292 (559)
.+.....+.|++|+++|++++++++.+..+|..+++.+.+.......+||+.|++.++++++..+ ..+++||+|+....
T Consensus 136 ~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~ 215 (438)
T TIGR00712 136 WPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGL 215 (438)
T ss_pred hHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCC
Confidence 99899999999999999999999999999999999887765444323899999999888877554 44567777642100
Q ss_pred hhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHH
Q 008615 293 RAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQ 372 (559)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (559)
+ + .++ .+.+.+.+.. + + .+. +.+.+....+.++|++.++...+...+.....
T Consensus 216 ~--------~--~~~-------~~~~~~~~~~------~---~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (438)
T TIGR00712 216 P--------P--IEE-------YRNDYPDDYN------E---K-AEQ-ELTAKEIFMQYVLPNKLLWYIAIANVFVYLLR 267 (438)
T ss_pred C--------C--chh-------cccccccccc------c---c-ccc-ccchHHHHHHHHccCchHHHHHHHHHHHHHHH
Confidence 0 0 000 0000000000 0 0 000 00000001123667777776654443333322
Q ss_pred hhChhhHHHhHHHHHHHc-CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc
Q 008615 373 ITGQPSVLYYAGPILQSA-GFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILG 451 (559)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (559)
..+..|.|.++++. |.+. ..+++...+..+..+++.++.|++.||+++++....+.....+.............
T Consensus 268 ----~~~~~~~p~~l~~~~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (438)
T TIGR00712 268 ----YGVLDWSPTYLKEVKHFAL-DKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPA 342 (438)
T ss_pred ----HHHHHhHHHHHHHccCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCC
Confidence 34667889998874 6665 67888888888999999999999999996544333332222221111111111111
Q ss_pred CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHH-HHHHHhhHHHHHhcCchhhHHHHHHH
Q 008615 452 GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSN-AIVTFAFSPLKELLGAENIFLLFAAI 530 (559)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~i~~~i~g~l~~~~g~~~~~~~~~~~ 530 (559)
.+.+.... ..+..+....+..........|.+|++.|+++.|+.+..+++++ +++|.+.|.+.|..|+...+.+.+++
T Consensus 343 ~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~ 421 (438)
T TIGR00712 343 GNPLVDMI-CMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGG 421 (438)
T ss_pred CchHHHHH-HHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHH
Confidence 12222221 12222221111111212356788999999999999998888775 68999999999999999999888888
Q ss_pred HHHHHHHHHhhccCCC
Q 008615 531 AFLAVLFIVRTVPETK 546 (559)
Q Consensus 531 ~~~~~~~~~~~~~~~~ 546 (559)
.+++.++.++..+|.|
T Consensus 422 ~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 422 SILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 8888887777777655
No 45
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=1.3e-31 Score=265.41 Aligned_cols=377 Identities=17% Similarity=0.131 Sum_probs=260.9
Q ss_pred hhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHH
Q 008615 96 WSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRE 175 (559)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~ 175 (559)
+...........+..++..++.....+.+|.+.++ ++.+..+.++..+++.++++++++++|+++||+|||++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~i~~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~ 83 (413)
T PRK15403 11 HAATLFFPMALILYDFAAYLTTDLIQPGIINVVRD-------FNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPV 83 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHH
Confidence 33334444445666677777888888888887766 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 176 LIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 176 ~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
++.+.+++++++++++++++++.++++|+++|++.+...+....++.|++++++|++++++...+..+|..+||++++.+
T Consensus 84 l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l 163 (413)
T PRK15403 84 LITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL 163 (413)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999877777888899999999999999999999999999999999998
Q ss_pred cCCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHH
Q 008615 256 INAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLV 334 (559)
Q Consensus 256 ~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (559)
.+.. |||+.|++.+++.++..+.. +++||+++. + ++ +.+
T Consensus 164 ~~~~-gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~---~~---------------------~~~------------ 203 (413)
T PRK15403 164 MHFV-HWKVLFAIIAVMGLIAFVGLLLAMPETVKR---G---AV---------------------PFS------------ 203 (413)
T ss_pred HHhc-CHHHHHHHHHHHHHHHHHHHHHhCCCCccc---c---CC---------------------CCC------------
Confidence 8776 99999999998887766553 457775420 0 00 000
Q ss_pred HhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHc-CCCCchhHHHHHHHHHHHHHHHH
Q 008615 335 SLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSA-GFSAAADATRVSVVIGVFKLVMT 413 (559)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 413 (559)
.+.....+++++|+|.++...+...+..... ..+..+.|.++++. +.+. .+.++.......+.+++.
T Consensus 204 -------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~----~~~~~~~P~~l~~~~g~s~-~~~gl~~~~~~~~~~i~~ 271 (413)
T PRK15403 204 -------AKSVLRDFRNVFRNRLFLTGAATLSLSYIPM----MSWVAVSPVILIDAGGMTT-SQFAWTQVPVFGAVIVAN 271 (413)
T ss_pred -------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH----HHHHHhChHHHHHhcCCCH-HHHHHHHHHHHHHHHHHH
Confidence 0000113556778877776555444433332 24555678887765 5665 778888888888888888
Q ss_pred HHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHH
Q 008615 414 WIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGI 493 (559)
Q Consensus 414 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 493 (559)
.+.+++.++..+++.......+..++..++........+..+..+...++...+.+.. .|......-.. ....+|++.
T Consensus 272 ~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~-~p~~~~~al~~-~~~~~G~a~ 349 (413)
T PRK15403 272 AIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLI-FPTLFRFTLFS-NNLPKGTVS 349 (413)
T ss_pred HHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH-hHHHHHHHhcc-CCCCCcHHH
Confidence 8888876555444443333223333333222211011122211222222232222222 22222111111 223479999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHH
Q 008615 494 SLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLA 534 (559)
Q Consensus 494 g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 534 (559)
++.+.....+..+++...+++.+. +....|...++++.+.
T Consensus 350 a~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~ 389 (413)
T PRK15403 350 ASLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGVI 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHHH
Confidence 999999999999999999888776 5556666555554443
No 46
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=272.28 Aligned_cols=389 Identities=19% Similarity=0.186 Sum_probs=271.7
Q ss_pred HHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHH
Q 008615 107 ALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALG 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~ 186 (559)
+++.++..++...+.+.+|.+.++ +|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 16 AFGFFMQSLDTTIVNTALPSMAQS-------LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHH-------hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 344566677777777778877766 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHH
Q 008615 187 ALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMY 266 (559)
Q Consensus 187 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f 266 (559)
.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+.. +||+.|
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~-gw~~~f 167 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYA-SWHWIF 167 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhc-cHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998877 999999
Q ss_pred hhhHHHHHHHHHHhh-ccCCchHHHHHhhccCCCchhhhHHHHHHHHH---hhcCCCCCCchhhHHHHHH---------H
Q 008615 267 GLSAPLALLMGIGMW-SLPPSPRWLLLRAVQGKGSLQEYKEQAISALG---KLRRRPPGDKLSERQIEDT---------L 333 (559)
Q Consensus 267 ~~~~~~~~~~~~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---------~ 333 (559)
++..++.++..++.. ..|+.+. ...|.+..+.......... ...+...... ........ .
T Consensus 168 ~~~~~~~~l~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (471)
T PRK10504 168 LINIPVGIIGAIATLMLMPNYTM------QTRRFDLSGFLLLAVGMATLTLALDGSKGLGL-SPLAIAGLVAVGVVALLL 240 (471)
T ss_pred HHHHHHHHHHHHHHHHhCCCccc------cCCCCChHHHHHHHHHHHHHHHHHhcCCcCCc-chHHHHHHHHHHHHHHHH
Confidence 998887776655543 3444321 0011111111100000000 0011111000 00000000 0
Q ss_pred HHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHH
Q 008615 334 VSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVM 412 (559)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 412 (559)
...++. +.+++.. ..+++|++.++...+..++..+.. .....+.|++++. .|.+. ...++......++.+++
T Consensus 241 ~~~~~~-~~~~~~~-~~~l~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~g~~~~~~~~~~~~~ 313 (471)
T PRK10504 241 YLLHAR-NNNRALF-SLKLFRTRTFSLGLAGSFAGRIGS----GMLPFMTPVFLQIGLGFSP-FHAGLMMIPMVLGSMGM 313 (471)
T ss_pred HHHHHh-cCCCCcc-CHHHhcccchHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHH
Confidence 000011 1111112 235788887776655444443332 2455677888875 66665 78888888888888889
Q ss_pred HHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhH
Q 008615 413 TWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRG 492 (559)
Q Consensus 413 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 492 (559)
.++.+++.||+++|+++..+..+.++...++.... ............+..+.......+....+..+.+|++.++.+
T Consensus 314 ~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~ 390 (471)
T PRK10504 314 KRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVA---LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSG 390 (471)
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhcc---ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccch
Confidence 89999999999999999888877777666554321 111222122222222222222223334667788899999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhcCc
Q 008615 493 ISLAVLTNFGSNAIVTFAFSPLKELLGA 520 (559)
Q Consensus 493 ~g~~~~~~~~g~~i~~~i~g~l~~~~g~ 520 (559)
.|+.++...+|..+++.+.|.+.+..|+
T Consensus 391 ~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 391 NSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999888775
No 47
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=5.2e-32 Score=269.34 Aligned_cols=375 Identities=23% Similarity=0.280 Sum_probs=260.1
Q ss_pred HHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH
Q 008615 106 PALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYAL 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i 185 (559)
..+..+..+++........|.+.++ +|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~ 94 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAE-------WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSV 94 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhc-------cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHH
Confidence 3334455666666666666766665 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 186 GALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 186 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
+.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+.. +||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-g~~~~ 173 (398)
T TIGR00895 95 FTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVF-GWRSL 173 (398)
T ss_pred HHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcc-cceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988877 99999
Q ss_pred HhhhHHHHHHHHH-HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccc
Q 008615 266 YGLSAPLALLMGI-GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEK 344 (559)
Q Consensus 266 f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (559)
|++.+++.++..+ ..+++||++++...+ +.++..+..++.......+.... . .+++.+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~ 235 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSK----------RPETVRRIVNAIAPQMQAEAQSA--L------PEQKATQGT 235 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhc----------CHHHHHHHHHHHHHhcccccccc--c------cccccccch
Confidence 9998766555444 446688887654332 01111111111111100000000 0 000000000
Q ss_pred ccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008615 345 SEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLG 424 (559)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 424 (559)
.+...+.+++++..+...... +..+...........+.|.+.++.+.+. ...+.......++.+++.++.+++.||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (398)
T TIGR00895 236 KRSVFKALFQGKTARITVLLW-LLYFMLLVGVYFLTNWLPKLMVELGFSL-SLAATGGALFNFGGVIGSIIFGWLADRLG 313 (398)
T ss_pred hhHHHHHHhcchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 111122233333223222222 2222223333456677887888888876 77888889999999999999999999999
Q ss_pred CcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHH
Q 008615 425 RRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSN 504 (559)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~ 504 (559)
+|+.. ....+.++...++... ..+.+..+...++ .+.......+...++..|.+|++.|+++.|+.+.+..+|.
T Consensus 314 ~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 387 (398)
T TIGR00895 314 PRVTA-LLLLLGAVFAVLVGST----LFSPTLLLLLGAI-AGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGA 387 (398)
T ss_pred hHHHH-HHHHHHHHHHHHHHHH----hhCHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHH
Confidence 98443 3333333333333221 1223333333333 3333333445566889999999999999999999999999
Q ss_pred HHHHHhhHHH
Q 008615 505 AIVTFAFSPL 514 (559)
Q Consensus 505 ~i~~~i~g~l 514 (559)
.++|.+.|.+
T Consensus 388 ~~g~~~~G~l 397 (398)
T TIGR00895 388 IIGPILAGYL 397 (398)
T ss_pred HHHHHhHHhc
Confidence 9999998875
No 48
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=8e-32 Score=274.96 Aligned_cols=395 Identities=17% Similarity=0.198 Sum_probs=279.2
Q ss_pred HHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHH
Q 008615 103 FLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVL 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~ 182 (559)
+..++++.++..++....+..+|.+..+ +|.+..+.+|+.+.+.++..++.++.|+++||+|||++++++.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 76 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPTIAGD-------LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFA 76 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHH
Confidence 3455566777888888888888888877 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 008615 183 YALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGW 262 (559)
Q Consensus 183 ~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 262 (559)
++++.++++++++++.++++|+++|++.+...+...+++.|++|+++|+++++++..+..+|..+||.+++++.+.. +|
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~w 155 (485)
T TIGR00711 77 FTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENY-HW 155 (485)
T ss_pred HHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCc-Cc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887 99
Q ss_pred hHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHH--HHHH-HhhcCCCCCCchhhHHHHHHH-----
Q 008615 263 RYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQA--ISAL-GKLRRRPPGDKLSERQIEDTL----- 333 (559)
Q Consensus 263 r~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~----- 333 (559)
|+.|++.++++++..++. +++||+++ +..++.+..+..-.. .... ......++.+..+........
T Consensus 156 ~~~f~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (485)
T TIGR00711 156 RWIFLINVPIGIIVVVVAFFILPRDKP-----AASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLV 230 (485)
T ss_pred eehhhhhhHHHHHHHHHHHHHcCCccc-----cccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHH
Confidence 999999888877765554 44565432 000111110000000 0000 001111111111111110000
Q ss_pred ---HHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHH
Q 008615 334 ---VSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFK 409 (559)
Q Consensus 334 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 409 (559)
.....+. +.+++....++++++.++...+..++..+..+ ....+.|.++++ .|.++ .+++....+..++.
T Consensus 231 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~p~~~~~~~g~s~-~~~g~~~~~~~~~~ 304 (485)
T TIGR00711 231 AIIAFVVWEL-TDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLY----GSFYLLPLYLQQVLGYTA-LQAGLHILPVGLAP 304 (485)
T ss_pred HHHHHHHHHH-cCCCCccCHHHHcCCChHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHH
Confidence 0000000 11111222457788877766555444444332 456678888876 46665 78899999999999
Q ss_pred HHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccch
Q 008615 410 LVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTR 489 (559)
Q Consensus 410 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 489 (559)
+++.++.|++.||++||+.+..+..+.+++..++..... .....+.......+.+.+.+....+.. ....+..|++++
T Consensus 305 ~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~~~~~~~~~-~~~~~~~~~~~~ 382 (485)
T TIGR00711 305 MLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT-PDTPFLAIALPQFIRGFGMGCFFMPLT-TIALSGLPPHKI 382 (485)
T ss_pred HHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC-CCCCHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCHHHH
Confidence 999999999999999999988888777777666552111 111222222222222222222223333 455677899999
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhHHHHHhc
Q 008615 490 GRGISLAVLTNFGSNAIVTFAFSPLKELL 518 (559)
Q Consensus 490 ~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 518 (559)
+++.|+.++.+.+|+.+++.+.+.+.++.
T Consensus 383 g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 383 ARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998753
No 49
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.5e-31 Score=266.72 Aligned_cols=369 Identities=18% Similarity=0.129 Sum_probs=261.8
Q ss_pred HhhhcccccccccccccccCCCCCCccccccchhH-----HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQ-----LGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYA 184 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 184 (559)
.++.++......+.+|.+.++ +|++..+ .|++.+++.++..++.+++|+++||+|||++++.+.++.+
T Consensus 23 ~~~~~~~~~~~~~~l~~~~~~-------~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 95 (408)
T PRK09874 23 CFLTGAAFSLVMPFLPLYVEQ-------LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMG 95 (408)
T ss_pred HHHHHHHHHHhhhhHHHHHHH-------hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHH
Confidence 445555555666677777655 7777544 5899999999999999999999999999999999999999
Q ss_pred HHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchH
Q 008615 185 LGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRY 264 (559)
Q Consensus 185 i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~ 264 (559)
++.++++++++++.+++.|++.|++.+ ..+....++.+++|+++|++++++...+..+|.+++|.+++.+.+.. +||+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~ 173 (408)
T PRK09874 96 IVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSY-GLRP 173 (408)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHH
Confidence 999999999999999999999999865 56777888999999999999999999999999999999999988777 9999
Q ss_pred HHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccc
Q 008615 265 MYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDE 343 (559)
Q Consensus 265 ~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (559)
.|++.+++.++..+.. ++++|.++. .+.++ ..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~------------------~~~--------------- 207 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQP-------------VSKKE------------------MLH--------------- 207 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCccc-------------ccchh------------------hhH---------------
Confidence 9999988877665544 445553210 00000 000
Q ss_pred cccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCch---hHHHHHHHHHHHHHHHHHHHHHHh
Q 008615 344 KSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAA---DATRVSVVIGVFKLVMTWIAVAKV 420 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~l~ 420 (559)
..+..+.++++.++...+...+.... .......+.+.+..+.+..... ..+.+....+++.+++.+..|++.
T Consensus 208 --~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~ 282 (408)
T PRK09874 208 --MREVVTSLKNPKLVLSLFVTTLIIQV---ATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLG 282 (408)
T ss_pred --HHHHHHhCcCCchHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00012234455443322221111111 1112334455555554333211 234555666778888899999999
Q ss_pred hhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHH
Q 008615 421 DDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTN 500 (559)
Q Consensus 421 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 500 (559)
||++||+.+..+..+..++.+.+... .+.+...+ ..+..+.......+...++..+..|++.+|+.+++.+...
T Consensus 283 dr~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 356 (408)
T PRK09874 283 DRIGPEKILITALIFSVLLLIPMSFV-----QTPLQLGI-LRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFR 356 (408)
T ss_pred hccccchhHHHHHHHHHHHHHHHHHh-----ccHHHHHH-HHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHH
Confidence 99999999888777666555444321 22232222 2233333333344444466677788899999999999999
Q ss_pred HHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 501 FGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 501 ~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
.+|..++|.+.|.+.+..|+...|.+.+++.+++.++.++..++
T Consensus 357 ~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 357 DIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred HHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888887766654443
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.7e-32 Score=268.06 Aligned_cols=349 Identities=15% Similarity=0.095 Sum_probs=260.9
Q ss_pred hhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH
Q 008615 111 LLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 190 (559)
++..+........+|....+ ++.+..+++++.+++.++..++++++|+++||+|||++++.+.++.+++.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 9 LISLIGTAITQVALPLYVLA-------GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVL 81 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 33344444445555555555 78899999999999999999999999999999999999999999999999888
Q ss_pred Hhch-----hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 191 AYAP-----GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 191 ~~~~-----~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
++++ +++.++++|+++|++.+...+...+++.|++|+++|++++++...+..+|.++||.+++.+.+.. +||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-g~~~~ 160 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATL-GIKWA 160 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHH
Confidence 8887 99999999999999999999999999999999999999999999999999999999999988877 99999
Q ss_pred HhhhHHHHHHHHHHhhcc--CCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccc
Q 008615 266 YGLSAPLALLMGIGMWSL--PPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDE 343 (559)
Q Consensus 266 f~~~~~~~~~~~~~~~~~--~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (559)
|++.++..++..+..+.+ ||.++ + +. ++.+... .+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~---~~------------------~~~~~~~-------------~~ 197 (365)
T TIGR00900 161 IWVDAVGFAISALLIVSVRIPELAA---------S---EI------------------QALSNAV-------------LR 197 (365)
T ss_pred HHHHHHHHHHHHHHHHhcccccCCC---------c---cc------------------cccchhH-------------HH
Confidence 999887776655544433 22111 0 00 0000000 00
Q ss_pred cccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008615 344 KSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD 422 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 422 (559)
+....++.++|++.++...+...+..+.... ....+.|.+.++ .+.+. .+.+.......++.+++.++.+++.||
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ 273 (365)
T TIGR00900 198 DTREGIKFVLKNPLLRTLLLLALLFNLVFAP---AIVALFPYVQSKYLGRGS-THYGWVLAAFGLGALLGALLLGLLGRY 273 (365)
T ss_pred HHHhHHHHHHcCcHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHhCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011245567777666555544443333221 223567777776 56666 778888999999999999999999999
Q ss_pred cCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHH
Q 008615 423 LGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFG 502 (559)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 502 (559)
++|++.+..+..+.+++...+... ..+ ........+..++......+...++..|.+|++.|+++.|+.+....+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 348 (365)
T TIGR00900 274 FKRMALMTGAIFVIGLAILVVGLT----PPN-FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA 348 (365)
T ss_pred hchhHHHHHHHHHHHHHHHHHHhh----chh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 999998887766666665555432 111 222233333333433344556668889999999999999999999999
Q ss_pred HHHHHHHhhHHHHHhcC
Q 008615 503 SNAIVTFAFSPLKELLG 519 (559)
Q Consensus 503 g~~i~~~i~g~l~~~~g 519 (559)
+..+++.+.|.+.|..|
T Consensus 349 ~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 349 AWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 99999999999998764
No 51
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-31 Score=259.46 Aligned_cols=363 Identities=21% Similarity=0.239 Sum_probs=274.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch--hHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP--GLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~ 215 (559)
++.+..+-+++.+.+++|+.+++++.|+++||||.|+++..+.++.++++++..++. +++.+++.|++||++.|..+|
T Consensus 68 ~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~p 147 (466)
T KOG2532|consen 68 YDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFP 147 (466)
T ss_pred ecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHh
Confidence 899999999999999999999999999999999999999999999999999999875 556789999999999999999
Q ss_pred hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhh-ccCCchHHHHHhh
Q 008615 216 GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMW-SLPPSPRWLLLRA 294 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~~~~~~ 294 (559)
+...+...|.|++||++..++..++..+|.+++.+++|++.+...||++.|++.++++++..++++ +..|+|..
T Consensus 148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~----- 222 (466)
T KOG2532|consen 148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK----- 222 (466)
T ss_pred hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc-----
Confidence 999999999999999999999999999999999999999998834999999999999999888874 45566641
Q ss_pred ccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhh
Q 008615 295 VQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQIT 374 (559)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (559)
+......|.+...+...++..+++.+.+++++++++.+|..++..+....
T Consensus 223 --------------------------h~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~---- 272 (466)
T KOG2532|consen 223 --------------------------HPNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNW---- 272 (466)
T ss_pred --------------------------CCCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHH----
Confidence 01111111111111111111222257789999999988877765554444
Q ss_pred ChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--------c-hhhhhHHHHHHHHHHHH
Q 008615 375 GQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR--------P-LLIGGVCGIALSLLLLS 444 (559)
Q Consensus 375 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--------~-~~~~~~~~~~~~~~~~~ 444 (559)
+...+..|.|.|+++ ++++- ...|++.++..+...+..+++|.++||+.+| + .-.++....+++++.+.
T Consensus 273 ~~~~l~~y~PtY~~~VL~f~v-~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~ 351 (466)
T KOG2532|consen 273 GFYLLLTYLPTYLKEVLGFDV-RETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLA 351 (466)
T ss_pred HHHHHHHHhhHHHHHHhCCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeee
Confidence 344688999999987 45555 8899999999999999999999999998663 1 12233444444444444
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH---hcCch
Q 008615 445 AYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE---LLGAE 521 (559)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~---~~g~~ 521 (559)
+. .....+..++.+.+..++.+....... .-..+. -+++.+..+|+.+.+..+.++++|.+.|.+.. ...|+
T Consensus 352 ~~---~~~~~~~a~~~l~~~~~~~g~~~~Gf~-~~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~ 426 (466)
T KOG2532|consen 352 FT---SDEHRLLAVILLTIAIGLSGFNISGFY-KNHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWR 426 (466)
T ss_pred ec---CCCcchHHHHHHHHHHHHcccchhhhH-hhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHH
Confidence 32 122333334333333333333222221 223333 44889999999999999999999999999984 23588
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 008615 522 NIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~ 541 (559)
..|++.+++.+++.++..++
T Consensus 427 ~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 427 IVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHhchheeEe
Confidence 99999999988888655554
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=4e-31 Score=261.66 Aligned_cols=344 Identities=16% Similarity=0.185 Sum_probs=255.0
Q ss_pred hhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH
Q 008615 111 LLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 190 (559)
+..........+..|.+.++ +|.++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAAD-------LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHhcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 34455566666777777666 99999999999999999999999999999999999999999999999999999
Q ss_pred HhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhH
Q 008615 191 AYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSA 270 (559)
Q Consensus 191 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~ 270 (559)
+++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+.. +||+.|++.+
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~-~~~~~~~~~~ 166 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL-SWHAIFAFLS 166 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999988877 9999999988
Q ss_pred HHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccc
Q 008615 271 PLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSF 349 (559)
Q Consensus 271 ~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (559)
++.++..+.. ++.||+++. + ++ ++ .++....+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~--------~----~~-----------------~~------------------~~~~~~~~ 199 (385)
T TIGR00710 167 LAGILLSALIFFILPETLPY--------E----AR-----------------IQ------------------ISTYFETF 199 (385)
T ss_pred HHHHHHHHHHHHhCCCCCCC--------c----cc-----------------CC------------------HHHHHHHH
Confidence 8877765554 445654320 0 00 00 00001124
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Q 008615 350 LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL 428 (559)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 428 (559)
++.++++.++...+...+..... .....+.|.+++ +.+.++ ...+.......++.+++.++.+++.||+++|+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~ 274 (385)
T TIGR00710 200 LLLLKSKMFWGYALIYGASFGGF----FAFFSGAPFVYIDIMGVSP-SVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSL 274 (385)
T ss_pred HHHHcCchhHHHHHHHHHHHHHH----HHHHHcChHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 45667776665554433333222 235556677665 566666 788888888999999999999999999999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHH
Q 008615 429 LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVT 508 (559)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 508 (559)
+..+..+..++..++...... ....+..........+.......+....+..|..| +.++++.++.+.....++.+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~ 352 (385)
T TIGR00710 275 LRMGLILFAVSAVLLEITAIL-GLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVG 352 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHH
Confidence 888777766666555433211 11222222222223333223333444466677776 6789999999988887777777
Q ss_pred HhhHHHHH
Q 008615 509 FAFSPLKE 516 (559)
Q Consensus 509 ~i~g~l~~ 516 (559)
.+.+.+.+
T Consensus 353 ~~~~~~~~ 360 (385)
T TIGR00710 353 YLVSLIHG 360 (385)
T ss_pred HHHHhccc
Confidence 77774433
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=6.4e-31 Score=260.37 Aligned_cols=350 Identities=16% Similarity=0.165 Sum_probs=245.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHH---h-chhHhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTA---Y-APGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~-~~~~~~l~~~r~l~G~~~g~~ 213 (559)
+|.++.+.|++.+.+.+++.++++++|+++||+|||+++..+.++++++++++. + .++++.+++.|+++|++.+..
T Consensus 43 ~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~ 122 (402)
T TIGR00897 43 LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLF 122 (402)
T ss_pred hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHH
Confidence 899999999999999999999999999999999999999999999998877653 3 357888999999999999888
Q ss_pred hhhhhhhhhccCCcccchhhhhHHHHHHHHHH-HHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHH
Q 008615 214 MHGAPLYIAETCPSQIRGTLISLKELFIVLGI-LLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLL 291 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~ 291 (559)
.+...+.+.+++|+++|++++|+..++.++|. ++++++++.+.+.. ||+..+|......++..++. ++.++.++
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 198 (402)
T TIGR00897 123 AYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAF-GEMNTLWSALAFVLTGGVIALFSNKDIFT--- 198 (402)
T ss_pred HhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-chHHHHHHHHHHHHHHHHHHHhccCCCCC---
Confidence 88888889999999999999999999999997 68999998888777 87766665444433333333 33333211
Q ss_pred HhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHH
Q 008615 292 LRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQ 371 (559)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (559)
++ .+ + ++ .+ .++.+..+++++|+|.++...+..++...
T Consensus 199 -----~~----~~-~----------~~---~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 236 (402)
T TIGR00897 199 -----PQ----HM-Q----------TR---EK------------------FSELGKAATILFTNPNVLLGGMVRIINTI- 236 (402)
T ss_pred -----cc----cc-c----------CC---cc------------------hhhHHHHHHHHHcChhHHHHHHHHHHHHH-
Confidence 00 00 0 00 00 00001123457777776655443333222
Q ss_pred HhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhh-hhHHHHHHHHHHHHHHHHhh
Q 008615 372 QITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLI-GGVCGIALSLLLLSAYYKIL 450 (559)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 450 (559)
....+..|.|.++++.|.+. .+.+.......++.+++.++.|+++||++||+.+. .+.+...++.+.+.......
T Consensus 237 ---~~~~~~~~~p~~~~~~g~s~-~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~ 312 (402)
T TIGR00897 237 ---GLFGFAVFLPMFVAELGFST-SEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF 312 (402)
T ss_pred ---HHHHHHHHHHHHHHHcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 23356778899998888877 66778778888999999999999999999888764 22333333322222211111
Q ss_pred cCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHH
Q 008615 451 GGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAI 530 (559)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~ 530 (559)
..+.+..+. ..+..+.+.....+.. ....|..| ++|+++.|+.+....+++.++|.+.|.+.+..|+...+++.+++
T Consensus 313 ~~~~~~~~~-~~~~~G~~~~~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~ 389 (402)
T TIGR00897 313 GHSFAVALI-IAIALGIFLAGYVPLA-AVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAAL 389 (402)
T ss_pred CCcHHHHHH-HHHHHHHHHHHHHHHH-HHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHH
Confidence 112222222 2222222222233333 44556644 68999999999999999999999999999999998999988888
Q ss_pred HHHHHHHHHh
Q 008615 531 AFLAVLFIVR 540 (559)
Q Consensus 531 ~~~~~~~~~~ 540 (559)
.+++.++..+
T Consensus 390 ~~i~~~~~~~ 399 (402)
T TIGR00897 390 YVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHH
Confidence 7777665544
No 54
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=5.5e-31 Score=261.48 Aligned_cols=341 Identities=19% Similarity=0.182 Sum_probs=250.9
Q ss_pred ccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch
Q 008615 115 YDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP 194 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~ 194 (559)
+....+.+.++.+.++ +|.++.+.+++.+++.+++.++++++|+++||+|||++++.+.++.+++.+++++++
T Consensus 20 ~~~~~~~p~~~~i~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 20 LATDMYLPAFKAIQAD-------LQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHhhHHHHHHH-------HCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3445556666666655 999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHH
Q 008615 195 GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLAL 274 (559)
Q Consensus 195 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~ 274 (559)
+++.+++.|+++|++.+...+...+++.|+++++++++..+.......+|..++|.+++++.+.. +||+.|++.+++.+
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~~~~~~~~~~ 171 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF-GWQAIFATLFAITL 171 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHH
Confidence 99999999999999998888888899999999999999999999999999999999999988877 99999999988888
Q ss_pred HHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcc
Q 008615 275 LMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQ 354 (559)
Q Consensus 275 ~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (559)
+..+..++++|+++. ++ +++++.+++++++
T Consensus 172 ~~~~~~~~~~~~~~~-------------~~-------------------------------------~~~~~~~~~~~~~ 201 (401)
T PRK11043 172 LLILPTLRLKPSKKA-------------RK-------------------------------------QSQDALTFKQLLK 201 (401)
T ss_pred HHHHHHHHcCCCCCc-------------cc-------------------------------------cchHHHHHHHHHc
Confidence 776666555554310 00 0000112455666
Q ss_pred cCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHH
Q 008615 355 GPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVC 434 (559)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 434 (559)
++.++...+...+..... ..+..+.|.++++.+++. ...++......++.+++.++.+++.||+++|+.......
T Consensus 202 ~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~g~s~-~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~ 276 (401)
T PRK11043 202 SKTYLGNVLIFAACSAAF----FAWLTGSPFILEQMGYSP-ADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLLPWLLV 276 (401)
T ss_pred ChhHHHHHHHHHHHHHHH----HHHHHHhHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 666554433332222221 235567788888888876 677887888888899999999999999999887666555
Q ss_pred HHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHH
Q 008615 435 GIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPL 514 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l 514 (559)
+.+++.+.+...........+..+....+. ++......+.......+..| +.++++.|+.+.....++..++.+.|.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 277 LFAVSVIAIWLASLLSHPSLVPLLIPFCVM-AAANGAIYPIVVAQALRPFP-QATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHhccCcHHHHHHHHHHH-HHHHHHHHHHHHHHHhhhCc-ccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 554444333322111112222222222222 22223334444455556666 6799999999999999999999999999
Q ss_pred HHhcCc
Q 008615 515 KELLGA 520 (559)
Q Consensus 515 ~~~~g~ 520 (559)
.+....
T Consensus 355 ~~~~~~ 360 (401)
T PRK11043 355 ISTPLL 360 (401)
T ss_pred cCCChh
Confidence 875433
No 55
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.8e-32 Score=270.80 Aligned_cols=372 Identities=19% Similarity=0.116 Sum_probs=257.5
Q ss_pred hhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH
Q 008615 111 LLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~ 190 (559)
+...++...++...|.+.++ +|.+..+.+++.+++.++..++.++.|+++||+|||++++++.++.+++.+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 77 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYLVEE-------IGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFF 77 (379)
T ss_pred hHHHHhHHhhhhhhHHHHHH-------hCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHH
Confidence 33444555566666666655 89999999999999999999999999999999999999999999999999999
Q ss_pred HhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHH-HhhhcccCCCCcchHHHhhh
Q 008615 191 AYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGY-FVGSFQINAVGGWRYMYGLS 269 (559)
Q Consensus 191 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~l~~~l~~~~~~wr~~f~~~ 269 (559)
+++++++.+++.|++.|++.+...+...+++.|++|+++|++++++...+..+|..+++ .+++.+.+.. +||+.|++.
T Consensus 78 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~ 156 (379)
T TIGR00881 78 GFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELY-SWHWVFIVP 156 (379)
T ss_pred HHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcC-CchhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 5666666655 999999998
Q ss_pred HHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccccccc
Q 008615 270 APLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGS 348 (559)
Q Consensus 270 ~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (559)
+++.++..+.. ++.+|+|+....+ ++ .+.+.++ .+.+. .+++.+.+..+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~-----------~~~~~------------~~~~~~~~~~~~~ 208 (379)
T TIGR00881 157 GIIAIIVSLICFLLLRDSPQSCGLP---PA--EEMPNEE-----------PDGDA------------EKKEEELTKKQIF 208 (379)
T ss_pred HHHHHHHHHHHheeeCCCccccccC---cc--ccCcccc-----------ccccc------------ccccccccchHHH
Confidence 88777654444 5566655310000 00 0000000 00000 0000001111223
Q ss_pred chhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcc
Q 008615 349 FLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRP 427 (559)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 427 (559)
.+++++++.++...+...+..... ..+..+.|.++.+ .+.+. .+.+.......++.+++.++.+++.||..+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~ 283 (379)
T TIGR00881 209 LQYVLLNKVLWYISLGYVFVYVVR----TGILDWSPLYLTQEKGFSK-EKASWAFTLYELGGLVGTLLAGWLSDKLFNGR 283 (379)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHcchhHHHHHHHHHHHcCCc
Confidence 456677777666555444443333 2456677777755 56665 78888899999999999999999999864433
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHH
Q 008615 428 LLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIV 507 (559)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 507 (559)
...............+...... ............+..+....+..+....+..|.+|++.|+++.|+.+....+|+.++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~ 362 (379)
T TIGR00881 284 RGPLAVFFMALIIVSLLVYWLN-PAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILA 362 (379)
T ss_pred chHHHHHHHHHHHHHHHHHhcC-cchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhh
Confidence 2222222222111111111110 111122222222233333333333444677899999999999999999999999999
Q ss_pred HHhhHHHHHhcCchhhH
Q 008615 508 TFAFSPLKELLGAENIF 524 (559)
Q Consensus 508 ~~i~g~l~~~~g~~~~~ 524 (559)
|.+.|.+.|..|++..|
T Consensus 363 ~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 363 GLPLGYLADGFGWAGAF 379 (379)
T ss_pred hhhHHHHHHhhcccccC
Confidence 99999999999886543
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=6.4e-31 Score=259.14 Aligned_cols=360 Identities=16% Similarity=0.115 Sum_probs=256.2
Q ss_pred Hhhhcccccccccccccc-cCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHH-HHHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATISL-QSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELI-IAAVLYALGA 187 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~ 187 (559)
.++.++..+...+.++.. .++ +|.+..++|++.+++.+...+.+++.|+++||+||||.++ .+.++.+++.
T Consensus 6 ~~~~~~~~~~~~~~l~~~l~~~-------~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~ 78 (375)
T TIGR00899 6 AFLTGIAGALQFPTLSLFLSEE-------VRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALAC 78 (375)
T ss_pred HHHHHHHHHHHhhHHHHHHHcc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 345555556666666653 344 8999999999999999999999999999999999988765 4666667788
Q ss_pred HHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhh--hhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 188 LTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTL--ISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 188 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
++++++++++.+++.|+++|.+.+...|...+++.|+.++++|++. .++...+.++|.++|+.+++.+.+.. +||+.
T Consensus 79 ~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~ 157 (375)
T TIGR00899 79 LLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF-GFTVM 157 (375)
T ss_pred HHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-ccHHH
Confidence 8899999999999999999988888888888889999887777654 67888889999999999999988877 99999
Q ss_pred HhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccc
Q 008615 266 YGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEK 344 (559)
Q Consensus 266 f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (559)
|++.+++.++..+.. +++||.|+.... + +
T Consensus 158 f~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~-------------------------~ 187 (375)
T TIGR00899 158 FLTAALAFVLCGVLVWLFLPSYPRGAPG-------------------------A-------------------------L 187 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCccc-------------------------c-------------------------c
Confidence 999998877766554 457776531000 0 0
Q ss_pred ccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 345 SEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPIL-QSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
+..+.++.++++.++...+...+.+... .....+.|.++ ++.+.++ .+.+.......+..+++.++.|++.||+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 262 (375)
T TIGR00899 188 TRLEVRGLLASRDTRLLFVACTLMWGCN----ILYIINMPLLIIHELGLPD-KLAGLMMGTAAGLEIPFMLLAGYLIKRF 262 (375)
T ss_pred CcchhhhhhcCcchHHHHHHHHHHHHHH----HHHHhhhHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 0001223455555554444333332222 12334556665 4466665 6677777777777788889999999999
Q ss_pred CCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHH
Q 008615 424 GRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGS 503 (559)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 503 (559)
++|+.+..+.++..+....+... .+.+..... .+..+.......+....+..|..|+ +++++.++.+...++|
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~g~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g 335 (375)
T TIGR00899 263 GKRRLMLLAALAGVAFYTGLAAD-----NSLWALLML-QLLNAIFIGILAGIGMLYFQDLMPG-RAGAATTLYTNTGRVG 335 (375)
T ss_pred cchhHHHHHHHHHHHHHHHHHHH-----HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHH
Confidence 99998877665544443333221 122222222 2222222222334455677888775 5679999999999999
Q ss_pred HHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHH
Q 008615 504 NAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIV 539 (559)
Q Consensus 504 ~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 539 (559)
..++|.+.|.+.+..|++..+.+.+++.+++.++..
T Consensus 336 ~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 336 WIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999888887777766543
No 57
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.9e-33 Score=257.05 Aligned_cols=373 Identities=18% Similarity=0.169 Sum_probs=257.3
Q ss_pred hhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHH
Q 008615 96 WSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRE 175 (559)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~ 175 (559)
++...+.++++++..++...|...+......++.. +|++++..|++.+.+.+.+.+++|+.|+++|||.||++
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~-------fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v 100 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTY-------FNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRV 100 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHh-------cCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceE
Confidence 33344455667777899999988887766666654 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 176 LIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 176 ~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
+.+|.++|.++.++++++..||+++++|.+.|+|.+...|+.+++++|.+|..+|++++++++.+..+|..+|.+++..+
T Consensus 101 ~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~v 180 (493)
T KOG1330|consen 101 IAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVV 180 (493)
T ss_pred EeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCcchHHHhhhHHHHHHHHHHhhc-cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHH
Q 008615 256 INAVGGWRYMYGLSAPLALLMGIGMWS-LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLV 334 (559)
Q Consensus 256 ~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (559)
.+....|||.|++.+++++++.++.++ .+|++|- ..++ .++.+..
T Consensus 181 a~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rg--------------a~~~-------~~~~~~~------------- 226 (493)
T KOG1330|consen 181 ASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERG--------------ARDE-------VDGENKM------------- 226 (493)
T ss_pred ccCccceEEEEEeehHHHHHHHHHHHhhccCcccc--------------cccc-------cccCCcC-------------
Confidence 887745999999999999998877754 5554430 0000 0000000
Q ss_pred HhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH----HcCCCCchhHHHHHHHHHHHHH
Q 008615 335 SLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ----SAGFSAAADATRVSVVIGVFKL 410 (559)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 410 (559)
........++.+.+.|++.+....+......+... .+.+|.|.+.. -.+.+. ....++..+...++.
T Consensus 227 ----~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~G----s~sww~p~~~~~~~~~~~~~~-~~~~ifg~vt~~~G~ 297 (493)
T KOG1330|consen 227 ----VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIG----SLSWWAPAFIYYSYELIGFDH-NATLIFGGVTCAGGS 297 (493)
T ss_pred ----CCCccchHHHHHHHHccCceeeehHHHHHHHHhcc----ccchhhhhHHHHHHHHhCCcc-ccchhhhhHHHhhch
Confidence 00011112223444555555544444333333322 34455554432 244444 566677788888899
Q ss_pred HHHHHHHHHhhhcCC----cchhhhhHHHHHHH---HHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeeccc
Q 008615 411 VMTWIAVAKVDDLGR----RPLLIGGVCGIALS---LLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEI 483 (559)
Q Consensus 411 ~~~~~~g~l~d~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (559)
+|.+++|.++||+.| .....+..+..+.+ .+.+.++............+.+++++-...........-+..|+
T Consensus 298 lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~v 377 (493)
T KOG1330|consen 298 LGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEV 377 (493)
T ss_pred hhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEe
Confidence 999999999999432 12222222211111 11111111111222222222222222222222233444677899
Q ss_pred CCccchhhHHHHHHHHHH-HHHHHHHHhhHHHHHhc
Q 008615 484 FPLRTRGRGISLAVLTNF-GSNAIVTFAFSPLKELL 518 (559)
Q Consensus 484 ~p~~~~~~~~g~~~~~~~-~g~~i~~~i~g~l~~~~ 518 (559)
+|++.|.+++++...+.. .|.+-+|++.|.+.|+.
T Consensus 378 V~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 378 VPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred cCcccccHHHHHHHHHHHHhccCCCcceehhHHHHh
Confidence 999999999999887744 45566666999998864
No 58
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-31 Score=243.49 Aligned_cols=349 Identities=19% Similarity=0.208 Sum_probs=277.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHh---HHHHHHHHHHhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLG---VLLVGRLLYGLGIGLAM 214 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~---~l~~~r~l~G~~~g~~~ 214 (559)
+|+|+.|.+++.++..+..++..++.|.+.||||.|++..+++++..+-.+..+++.+++ ++++++.+.|++.+ .+
T Consensus 44 ~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sF 122 (417)
T COG2223 44 FGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SF 122 (417)
T ss_pred cCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-ee
Confidence 999999999999999999999999999999999999999999999999999999986554 99999999999765 78
Q ss_pred hhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCc---chHHHhhhHHHHHHHHHHh-hccCCchHHH
Q 008615 215 HGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGG---WRYMYGLSAPLALLMGIGM-WSLPPSPRWL 290 (559)
Q Consensus 215 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~---wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~ 290 (559)
.+....++.|||++++|.++|+.. ..|+|..+...++..+.... + ||....+..+..++..++. +.+.|.|...
T Consensus 123 av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~-g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r 200 (417)
T COG2223 123 AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAF-GFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHR 200 (417)
T ss_pred hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhh
Confidence 889999999999999999999999 99999999999988888777 6 9999999888888866665 4455555310
Q ss_pred HHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccccc-ccchhhcccCchhHHHHHHHHHH
Q 008615 291 LLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSE-GSFLEVFQGPNLKAFIIGGGLVL 369 (559)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 369 (559)
. ..++.. .+++.++++++.|.+.+.+...+
T Consensus 201 ~-------------------------------------------------~~~~~~~~~~~~v~~~~~~W~lsllY~~tF 231 (417)
T COG2223 201 A-------------------------------------------------SVKPQLPAQLKAVFSNKDTWLLSLLYFATF 231 (417)
T ss_pred c-------------------------------------------------cccccchhHHHHHhcCcchHHHHHHHHHHH
Confidence 0 000111 34667788888887775554444
Q ss_pred HHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHH
Q 008615 370 FQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYK 448 (559)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (559)
. ++..+..++|.++++ ++.++ ..++.......+.+.+.+.++|+++||+|.+|.+...+..++++..++.....
T Consensus 232 G----~Fvgfs~~l~~~~~~~fg~~~-~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~ 306 (417)
T COG2223 232 G----GFVGFSAYLPMYLVTQFGLSP-VTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLT 306 (417)
T ss_pred H----HHHHHHHHHHHHHHHhcCCCh-hhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccc
Confidence 3 445688899988876 45555 88889999999999999999999999999999999999888888877775432
Q ss_pred hhc--CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-chhhHH
Q 008615 449 ILG--GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-AENIFL 525 (559)
Q Consensus 449 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~ 525 (559)
... .+....+..+.....+.+.+- ...+-++...+| ++.|.+.|+...++.+|++.-|...|...+..| +...|+
T Consensus 307 ~~~~~~~~~~~~~~~l~l~~~~G~Gn-Gsvfk~Ip~if~-~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~ 384 (417)
T COG2223 307 GFGHGGSFVVFVAVFLALFVFAGLGN-GSVFKMIPVIFP-KETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFM 384 (417)
T ss_pred ccccCcchHHHHHHHHHHHHHhccCc-chheeechHHHH-hhhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHH
Confidence 111 222333333333333444443 344577788877 578999999999999999999999999999999 778888
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 008615 526 LFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~ 545 (559)
++..+.+++.++.+....+.
T Consensus 385 ~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 385 LLLAFYLVALVLTWALYARR 404 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 88888888888776655443
No 59
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-31 Score=259.12 Aligned_cols=388 Identities=21% Similarity=0.217 Sum_probs=265.5
Q ss_pred cccchhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008615 91 QEAFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFL 170 (559)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~ 170 (559)
.++..++..+.++.+++...+....+...++.+...- +.+| .++...+.+++.++|+++++++.+++|.|.||+
T Consensus 35 ~~~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g----~~ed--l~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~ 108 (495)
T KOG2533|consen 35 ERKLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSG----LKED--LKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF 108 (495)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcC----Cccc--cchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC
Confidence 3445566666667777777777777765555433322 2233 889999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHH
Q 008615 171 GRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYF 250 (559)
Q Consensus 171 Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 250 (559)
+..+.+....+++++..++....+|++.+++.|++.|+.++..+|....+++.|+.+++|++.++++.+..++|.++|++
T Consensus 109 ~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggl 188 (495)
T KOG2533|consen 109 PLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGL 188 (495)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHH
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccc------CCCCcchHHHhhhHHHHHHHHHHh-hccCCchH--HHHHhhccCCCchhhhHHHHHHHHHhhcCCCCC
Q 008615 251 VGSFQI------NAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPR--WLLLRAVQGKGSLQEYKEQAISALGKLRRRPPG 321 (559)
Q Consensus 251 l~~~l~------~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (559)
++..+. ... ||||.|++.++++++..++. +++|+.|. |+. ++ +|.+-..++.+..+..
T Consensus 189 iA~g~~~~~~~~~~~-gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl-----------~~-~ek~~~~~~~~~~~~~ 255 (495)
T KOG2533|consen 189 IAYGVFKLNGSGGLA-GWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFL-----------TD-EEKELVVERLRESPSG 255 (495)
T ss_pred HHHHhhhhcCCCCcC-CceeehhHHHHHHHHHHheEEEEecCChhhcccc-----------ch-HHHHHHHHHHHhccCC
Confidence 998853 233 99999999999999877655 67899885 111 11 1111111112111111
Q ss_pred CchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHH
Q 008615 322 DKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATR 400 (559)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 400 (559)
. ..++.++..+++.+++|..|.+.++.++.... .+.+.+|+|.++.+ .+++. .++..
T Consensus 256 ~-----------------~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv----~~~~~~~lpl~l~~~~~~s~-~~a~~ 313 (495)
T KOG2533|consen 256 G-----------------IENKFKWKGFKEALKDPGVWPFSLCYFFLKLV----NYGFSYWLPLYLKSNGGYSE-LQANL 313 (495)
T ss_pred C-----------------cccccCHHHHHHHHhchhHHHHHHHHHHHhhc----cccHHHHHHHHHHcCCCcCh-HHhcc
Confidence 1 01114556788899999888777655444443 34688999999998 34666 88999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc----CCcchhhhhHHHHHHHH-HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccc
Q 008615 401 VSVVIGVFKLVMTWIAVAKVDDL----GRRPLLIGGVCGIALSL-LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPI 475 (559)
Q Consensus 401 ~~~~~~~~~~~~~~~~g~l~d~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (559)
+.++..++++++.+++|+++||+ .+|........+..+.. ..+.. ...... ....++..........++
T Consensus 314 ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~-----~~~~~~-~~~~~~~~~~~~~~~~~~ 387 (495)
T KOG2533|consen 314 LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLA-----AAVLPG-AYGAFLIGPYGLIATAII 387 (495)
T ss_pred ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHh-----hccchH-HhHHHHhcchhhHHHHHH
Confidence 99999999999999999999994 44544444444433332 22221 111111 111122222222222334
Q ss_pred cceeecccCCccch-hhHHHHHHHHHHHHHHHHHHhhHHH-HHhcCchhhHH
Q 008615 476 SWLMVSEIFPLRTR-GRGISLAVLTNFGSNAIVTFAFSPL-KELLGAENIFL 525 (559)
Q Consensus 476 ~~~~~~~~~p~~~~-~~~~g~~~~~~~~g~~i~~~i~g~l-~~~~g~~~~~~ 525 (559)
.....++....+.+ -+..+........++.++|.+.-.. ...+++...|.
T Consensus 388 ~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~ 439 (495)
T KOG2533|consen 388 ALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFY 439 (495)
T ss_pred HHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHH
Confidence 44455555444433 3344444444555555555544332 23356666773
No 60
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=2.4e-30 Score=257.36 Aligned_cols=364 Identities=16% Similarity=0.114 Sum_probs=253.8
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 008615 105 FPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYA 184 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 184 (559)
...+..+..+++....+...|.++++ +|+++.+.|++.+.+.+++.+++++.|++.||+|||+++..++++++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~p~i~~~-------~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~ 102 (438)
T PRK10133 30 LLCSLFFLWAVANNLNDILLPQFQQA-------FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 33344566677777777777777655 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHH---HhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccC-C--
Q 008615 185 LGALTT---AYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIN-A-- 258 (559)
Q Consensus 185 i~~~~~---~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~-- 258 (559)
++.+++ +++++++.++++|+++|+|.|...+....++.|+.++++|.+.+++.+..+.+|..+|+.+++.+.. .
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~ 182 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVP 182 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999886 4688999999999999999999999999999998777777778999999999999999998875431 0
Q ss_pred ---------------C-------CcchHHHhhhHHHHH-HHHHH-hhccCCchHHHHHhhccCCCchhhhHHHHHHHHHh
Q 008615 259 ---------------V-------GGWRYMYGLSAPLAL-LMGIG-MWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGK 314 (559)
Q Consensus 259 ---------------~-------~~wr~~f~~~~~~~~-~~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (559)
. .+||++|+....+.. +..++ ...+||.+. ++
T Consensus 183 ~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~--------------~~---------- 238 (438)
T PRK10133 183 HQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS--------------DN---------- 238 (438)
T ss_pred ccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--------------cc----------
Confidence 0 156666764333333 32222 222443211 00
Q ss_pred hcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHH-HH-cCC
Q 008615 315 LRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPIL-QS-AGF 392 (559)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 392 (559)
.. +.+........++++++|.++...+..++..... .....|.+.++ ++ .|.
T Consensus 239 --~~--------------------~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~l~~~~~g~ 292 (438)
T PRK10133 239 --HS--------------------DAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQ----TACWSYLIRYAVEEIPGM 292 (438)
T ss_pred --cc--------------------cccccchhhhHHHHHhCchHHHHHHHHHHHHHHH----HHHHHHHHHHHhhhcCCC
Confidence 00 0000001122456778887765554433333322 23444666564 43 566
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccc
Q 008615 393 SAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISF 472 (559)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (559)
++ ..+++......++.++|+++++++.||+++|+++..+.++..+.+++..+. ... ..+..+. ..+++....
T Consensus 293 s~-~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~-l~glg~~~i 364 (438)
T PRK10133 293 TA-GFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFA-----GGH-VGLIALT-LCSAFMSIQ 364 (438)
T ss_pred CH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-----CCh-HHHHHHH-HHHHHHHHH
Confidence 66 889999999999999999999999999999999888766665554443321 111 2222222 333344445
Q ss_pred ccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-chhhHHHHHHHHHHHH
Q 008615 473 GPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-AENIFLLFAAIAFLAV 535 (559)
Q Consensus 473 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~ 535 (559)
.|..++...+..|+ ..+.+.++..+ ..+|+.++|.+.|.+.|..| .+..|++...+.+...
T Consensus 365 ~P~~~s~a~~~~~~-~~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 365 YPTIFSLGIKNLGQ-DTKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHHcccch-hhccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 56666778887774 46778888764 55788999999999999887 5667765444443333
No 61
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=1.2e-30 Score=256.93 Aligned_cols=348 Identities=14% Similarity=0.037 Sum_probs=245.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
++.+..+.+++.+.+.+++.++.+++|+++||+|||++++++.+++++++++++++.+. ++.|+++|++.+...|..
T Consensus 33 ~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~ 109 (393)
T PRK11195 33 LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAK 109 (393)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999888877664 788999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccC
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQG 297 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~ 297 (559)
.+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+++.+...++..+..+.+||+|....
T Consensus 110 ~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~--~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~------ 181 (393)
T PRK11195 110 YGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP--HAEAALAVCALIYLLAALFNLFIPRLGARRP------ 181 (393)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccc------
Confidence 99999999999999999999999999999999999998874 5888887776665555555566777653100
Q ss_pred CCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChh
Q 008615 298 KGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQP 377 (559)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (559)
+ + +.+.. . ..++. +..++.+++++.++...+...+.+....
T Consensus 182 ~-~-~~~~~---~-----------------~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~---- 222 (393)
T PRK11195 182 G-Q-SWNPI---A-----------------LLRDF-------------FHACRVLWRDKLGRFSLAGTTLFWGAGA---- 222 (393)
T ss_pred c-c-CCCHH---H-----------------HHHHH-------------HHHHHHHHhCchhHHHHHHHHHHHHHHH----
Confidence 0 0 00000 0 00000 0012456677766554443333222221
Q ss_pred hHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 378 SVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 378 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
...+..+.++++ .+.++ .+.+......+++.+++.++.+++.||.++++.+..+. +.++....+.. ..+.+.
T Consensus 223 ~~~~~~~~~~~~~lg~s~-~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~-----~~~~~~ 295 (393)
T PRK11195 223 TLRFLVLAWAPVALGITL-NQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMAL-----QHSLLP 295 (393)
T ss_pred HHHHHHHHHHHHHcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHH-----HhHHHH
Confidence 233344445544 46665 78999999999999999999999999998888776664 33333222221 122222
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccc-hhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRT-RGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAV 535 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 535 (559)
......+.+.+.+.. .+...+...+..|++. +|++.++.+..++++..++..+.+.+ +..|....+.+.+...+++.
T Consensus 296 ~~~~~~~~G~~~g~~-~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 373 (393)
T PRK11195 296 AYPLLILIGALGGFF-VVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVAL 373 (393)
T ss_pred HHHHHHHHHHhhhhh-hhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHH
Confidence 222222232222222 3333466677766554 79999999999999999999998855 77888888777766666666
Q ss_pred HHHHhhccC
Q 008615 536 LFIVRTVPE 544 (559)
Q Consensus 536 ~~~~~~~~~ 544 (559)
.+.+.+..+
T Consensus 374 ~~~~~~~~~ 382 (393)
T PRK11195 374 AMALLWRWH 382 (393)
T ss_pred HHHHHHHHH
Confidence 655555433
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=2.9e-30 Score=252.24 Aligned_cols=342 Identities=34% Similarity=0.417 Sum_probs=281.3
Q ss_pred HHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH
Q 008615 108 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGA 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~ 187 (559)
+..+..+++.....+..+...++ +|.+..+.+++.+.+.++..++.+++|+++||+|||+.+..+.++..++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~ 78 (352)
T cd06174 6 LGFFLSGLDRGLLSPALPLLAED-------LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGS 78 (352)
T ss_pred HHHHHHHHhhhhhHhhHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHH
Confidence 33455566666666777777665 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHh
Q 008615 188 LTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYG 267 (559)
Q Consensus 188 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~ 267 (559)
+++.++++++.++++|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+.+.. +||+.++
T Consensus 79 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~ 157 (352)
T cd06174 79 LLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL-GWRWLFL 157 (352)
T ss_pred HHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988877 8999999
Q ss_pred hhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccc
Q 008615 268 LSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEG 347 (559)
Q Consensus 268 ~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (559)
+.+++.++..+...+++
T Consensus 158 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 174 (352)
T cd06174 158 ILAILGLLLALLLLFLL--------------------------------------------------------------- 174 (352)
T ss_pred HHHHHHHHHHHHHHHHH---------------------------------------------------------------
Confidence 99888887766655431
Q ss_pred cchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHc-CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc
Q 008615 348 SFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSA-GFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR 426 (559)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 426 (559)
|.++...+.. +...........+.+.+.++. +.++ .+.+.......++.+++.++.+++.||++||
T Consensus 175 --------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 241 (352)
T cd06174 175 --------RLLLLLALAF----FLLSFGYYGLLTYLPLYLQEVLGLSA-AEAGLLLSLFGLGGILGALLGGLLSDRLGRR 241 (352)
T ss_pred --------HHHHHHHHHH----HHHHhHHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1122222222 222233345677788888776 6665 7889999999999999999999999999999
Q ss_pred c-hhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHH
Q 008615 427 P-LLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNA 505 (559)
Q Consensus 427 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 505 (559)
+ .+..+..+..++.+.+... .+ ........+..+.......+....+..|..|+++|++.+|+.+....++..
T Consensus 242 ~~~~~~~~~~~~i~~~~~~~~-----~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T cd06174 242 RLLLLIGLLLAALGLLLLALA-----PS-LALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGA 315 (352)
T ss_pred hHHHHHHHHHHHHHHHHHHHh-----cc-HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9 8888888887777766642 22 233333444444444455667778999999999999999999999999999
Q ss_pred HHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHH
Q 008615 506 IVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIV 539 (559)
Q Consensus 506 i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 539 (559)
+++.+.|.+.+..++...+.+.+++.+++.++.+
T Consensus 316 i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 316 LGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999998888887776543
No 63
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.98 E-value=3.4e-30 Score=254.97 Aligned_cols=344 Identities=17% Similarity=0.186 Sum_probs=242.2
Q ss_pred ccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhH
Q 008615 117 IGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGL 196 (559)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 196 (559)
.....+.+|.+.++ +|.+..+.+++.+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.+++++
T Consensus 19 ~~~~~~~lp~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~ 91 (392)
T PRK10473 19 IDMYLVGLPRIAAD-------LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETS 91 (392)
T ss_pred HHHHhhhHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcH
Confidence 33444567776666 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHH
Q 008615 197 GVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLM 276 (559)
Q Consensus 197 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 276 (559)
+.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+.. +||+.|++.+++.++.
T Consensus 92 ~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~-g~~~~~~~~~~~~~i~ 170 (392)
T PRK10473 92 SLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKF-PWQSLFYTMAAMGILV 170 (392)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-ChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999877766 9999999998887776
Q ss_pred HHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhccc
Q 008615 277 GIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQG 355 (559)
Q Consensus 277 ~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (559)
.++. +++||++.. + ++ .+ .......++.+++
T Consensus 171 ~~~~~~~~~~~~~~--------~---~~-----------------~~--------------------~~~~~~~~~~~~~ 202 (392)
T PRK10473 171 LLLSLFILKETRPA--------R---AP-----------------AA--------------------SSKPRENSESLLN 202 (392)
T ss_pred HHHHHHHcCCCCCc--------c---cC-----------------Cc--------------------cchHHHHHHHHhC
Confidence 5554 456664320 0 00 00 0000012234555
Q ss_pred CchhHHHHHHHHHHHHHhhChhhHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHH
Q 008615 356 PNLKAFIIGGGLVLFQQITGQPSVLYYAGPIL-QSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVC 434 (559)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 434 (559)
+.++...+...+...... .+..+.|.++ ++.|.+. ...+......+++.+++.++.+++.||+++|+.+..+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 203 RFFLSRLVITTLSVTVIL----TFVNTSPVLLMEQMGFSR-GEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHhCHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 554443333222222211 2334455555 4457766 678888888899999999999999999999999888887
Q ss_pred HHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHH
Q 008615 435 GIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPL 514 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l 514 (559)
+..++.+.+.... ..........+...+...+.. . ....+..|.+.++ |.......++..+++.+.+.+
T Consensus 278 ~~~~~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~-~--~~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l 346 (392)
T PRK10473 278 LFLAAGITLALSP-----SHAVSLFGITLICAGFSVGFG-V--AMSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWL 346 (392)
T ss_pred HHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhH-H--HHHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHH
Confidence 7777666655432 112222222222222222221 1 2223444544443 444455567777888888888
Q ss_pred HHhcCchhhHHHHHHHHH
Q 008615 515 KELLGAENIFLLFAAIAF 532 (559)
Q Consensus 515 ~~~~g~~~~~~~~~~~~~ 532 (559)
.+..|+.....+.+.+.+
T Consensus 347 ~~~~g~~~~~~~~~~~~~ 364 (392)
T PRK10473 347 AAVLGISAWNMLIGILIA 364 (392)
T ss_pred HHHhccchhHHHHHHHHH
Confidence 888887655554444333
No 64
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.98 E-value=6.7e-31 Score=256.75 Aligned_cols=344 Identities=27% Similarity=0.363 Sum_probs=252.4
Q ss_pred Hhhhcccccccccccc-cccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATI-SLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGAL 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 188 (559)
.++.+++.....+.++ .+.++ +|.+..+++++.+++.++..++.++.|+++||+|||++++++.++.+++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 77 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEE-------LGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSL 77 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCC-------STTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHH
Confidence 3444555555666666 55555 999999999999999999999999999999999999999999999999977
Q ss_pred HHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhh
Q 008615 189 TTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGL 268 (559)
Q Consensus 189 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~ 268 (559)
+..++++++.++++|++.|++.+...+...+++.|++|+++|++++++...+.++|.++++.+++.+.+.. +||+.|++
T Consensus 78 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-~~~~~~~~ 156 (352)
T PF07690_consen 78 LLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-GWRWAFLI 156 (352)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC-HHCCHHHH
T ss_pred HhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc-cccccccc
Confidence 77777888899999999999999999999999999999999999999999999999999999999998776 89999999
Q ss_pred hHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccc
Q 008615 269 SAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEG 347 (559)
Q Consensus 269 ~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (559)
.+++.++..++. ++++++++....+ + +.+. . .+.+++..
T Consensus 157 ~~~~~~~~~il~~~~~~~~~~~~~~~--------~------------------~~~~-~-------------~~~~~~~~ 196 (352)
T PF07690_consen 157 SAILSLIAAILFILFLPEPPPPRERE--------S------------------PKES-E-------------SKKPKPLK 196 (352)
T ss_dssp HHHHHHHHHHHHHCCC---STTTT----------S------------------STTT-T---------------HHHCCC
T ss_pred ccchhhhhhhhHhhhhhhcccccccc--------c------------------cccc-c-------------cccccccc
Confidence 999999887653 4454443200000 0 0000 0 00111112
Q ss_pred -cchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHH-HHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 008615 348 -SFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPI-LQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGR 425 (559)
Q Consensus 348 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 425 (559)
.++.+++++.++..++......+.. .....+.|.+ .+..+.+...+.+.......+..+++.++.+++.||+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 272 (352)
T PF07690_consen 197 PGFKSLFKNPVLWILLIAFFLFFFVF----SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGR 272 (352)
T ss_dssp H-CTHHHHHHCCHHHHHHHHHHHHHH----HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccchhhhhhhhhhHHHHHH----HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 2566777776663333333332222 2467777877 556677622688888999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHH
Q 008615 426 RPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNA 505 (559)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 505 (559)
++..........+..+.+...... .+....+....+ .+.......+....+..+.+|++++|++.|+.+...++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~ 349 (352)
T PF07690_consen 273 RRRLLIAILLLILGALGLLLLPFS--SSPVWLIIALFL-IGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGI 349 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSHHH--CHHHHHHHHHHH-HHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 887777666666655555432211 222333333333 33333344566678899999999999999999999999999
Q ss_pred HHH
Q 008615 506 IVT 508 (559)
Q Consensus 506 i~~ 508 (559)
++|
T Consensus 350 igP 352 (352)
T PF07690_consen 350 IGP 352 (352)
T ss_dssp HHH
T ss_pred HCC
Confidence 887
No 65
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.98 E-value=6.1e-30 Score=258.10 Aligned_cols=370 Identities=14% Similarity=0.066 Sum_probs=259.4
Q ss_pred hhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----chHHH-HHHHHHHHH
Q 008615 111 LLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-----GRKRE-LIIAAVLYA 184 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~ 184 (559)
+..|.......+.++....+ .|.+..++|.+ +...+.+ ++.+++|+++||+ |||+. ++.+.++.+
T Consensus 22 ~~~gl~~~~~~~~l~~~l~~-------~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~ 92 (491)
T PRK11010 22 FASGLPLALTSGTLQAWMTV-------ENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLL 92 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHh-------CCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHH
Confidence 44555555666667766655 78999999997 4444444 6899999999999 99885 667777777
Q ss_pred HHHHHHHhc---hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCc
Q 008615 185 LGALTTAYA---PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGG 261 (559)
Q Consensus 185 i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~ 261 (559)
++.+++++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..+|.++++.++.++.+...|
T Consensus 93 ~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G 172 (491)
T PRK11010 93 VAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLADRYLG 172 (491)
T ss_pred HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 787777775 47889999999999999999999999999999999999999999999999999999999998873239
Q ss_pred chHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccc
Q 008615 262 WRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYT 341 (559)
Q Consensus 262 wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (559)
||..|++.+++.++..+..+++||+++.. ++ ++. .
T Consensus 173 Wr~~f~i~a~l~ll~~l~~~~~~e~~~~~------~~----------------------~~~--~--------------- 207 (491)
T PRK11010 173 WQGMYWLMAALLIPCIIATLLAPEPTDTI------PV----------------------PKT--L--------------- 207 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccc------cc----------------------ccc--h---------------
Confidence 99999999988877766666677754200 00 000 0
Q ss_pred cccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHH-HHcCCCCchhHHHHH-HHHHHHHHHHHHHHHHH
Q 008615 342 DEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPIL-QSAGFSAAADATRVS-VVIGVFKLVMTWIAVAK 419 (559)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l 419 (559)
++....++++.++++..+...+..++...... ....+.+.++ ++.|++. .+.+... ....++.+++.+++|++
T Consensus 208 ~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~----~~~~~~~~~l~~~~G~s~-~~~g~~~~~~g~i~~iiG~ll~G~L 282 (491)
T PRK11010 208 EQAVVAPLRDFFGRNNAWLILLLIVLYKLGDA----FAMSLTTTFLIRGVGFDA-GEVGLVNKTLGLLATIVGALYGGIL 282 (491)
T ss_pred hhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001124456666665544443333222221 2333445554 5578777 6777776 45567899999999999
Q ss_pred hhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHH
Q 008615 420 VDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT 499 (559)
Q Consensus 420 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 499 (559)
.||+++|+.+.++.++.++..+.+..... ...+.+......++...+++.... ...++..++.+++.+++..|+.+..
T Consensus 283 ~dr~g~~~~l~i~~~l~~l~~l~~~~l~~-~~~~~~~l~~~~~l~~~~~g~~~~-~~~a~~~~l~~~~~~~t~~gl~~s~ 360 (491)
T PRK11010 283 MQRLSLFRALMIFGILQGVSNAGYWLLSI-TDKNLYSMGAAVFFENLCGGMGTA-AFVALLMTLCNKSFSATQFALLSAL 360 (491)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 99999988877666555554433322111 111222222222222222222222 2346777888989999999999999
Q ss_pred HHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhh
Q 008615 500 NFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 500 ~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 541 (559)
..+|..+++.+.|.+.|..||...|.+.+++.+++.++.+..
T Consensus 361 ~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 361 SAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888888888888877666554
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.98 E-value=4.4e-30 Score=253.50 Aligned_cols=337 Identities=17% Similarity=0.165 Sum_probs=243.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.+..++|++.+.+.++..+..++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.+...+..
T Consensus 41 ~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~ 120 (400)
T PRK11646 41 LGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPR 120 (400)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhcc
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQ 296 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~ 296 (559)
.+++.|++|+++|++++++.....++|..+||.+++++. .. +||+.|++.+++.++..++. ++.||.+.
T Consensus 121 ~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~-g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-------- 190 (400)
T PRK11646 121 TALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QY-DFRLVCATGAVLFVLAAAFNAWLLPAYKL-------- 190 (400)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-hHHHHHHHHHHHHHHHHHHHHHhCCcccc--------
Confidence 999999999999999999999999999999999999988 55 99999999888777655443 44443210
Q ss_pred CCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhCh
Q 008615 297 GKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQ 376 (559)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (559)
++ . +++.+..++++++++.++...+.....+...
T Consensus 191 ------~~-----------------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 224 (400)
T PRK11646 191 ------ST-----------------V-------------------RTPVREGMTRVLRDKRFVTYVLTLTGYYMLA---- 224 (400)
T ss_pred ------cc-----------------c-------------------chhhHHHHHHHHcCchHHHHHHHHHHHHHHH----
Confidence 00 0 0000112455667766554433322222211
Q ss_pred hhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh-hcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchh
Q 008615 377 PSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVD-DLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPL 455 (559)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (559)
.....+.|.++++.+.++ ...+.......++...+....+++.| |++.++.+..+.++.+++.+++... ++.+
T Consensus 225 ~~~~~~~p~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~ 298 (400)
T PRK11646 225 VQVMLMLPIMVNDIAGSP-SAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV-----SNLQ 298 (400)
T ss_pred HHHHHhhhhhHHhhcCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh-----hhHH
Confidence 123456788888876655 67777777776666655555565555 5665666666666666665544421 2222
Q ss_pred HHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC----chhhHHHHHHHH
Q 008615 456 VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG----AENIFLLFAAIA 531 (559)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g----~~~~~~~~~~~~ 531 (559)
......++...+. ....|...++..+..|++.+|+++|+.+....+|..++|.+.|.+.|..+ ....+.+.+++.
T Consensus 299 ~~~~~~~l~~~g~-~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~ 377 (400)
T PRK11646 299 QLFTLICLFYIGS-IIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIG 377 (400)
T ss_pred HHHHHHHHHHHHH-HHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHH
Confidence 2222222222222 23334555778899999999999999999999999999999999998753 234455545555
Q ss_pred HHHHHH
Q 008615 532 FLAVLF 537 (559)
Q Consensus 532 ~~~~~~ 537 (559)
+++.+.
T Consensus 378 ~~~~~~ 383 (400)
T PRK11646 378 LITLLA 383 (400)
T ss_pred HHHHHH
Confidence 555443
No 67
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=4.8e-30 Score=252.72 Aligned_cols=340 Identities=16% Similarity=0.154 Sum_probs=247.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|++..++|++.+++.+++.+++++.|+++||+|||++++++.++.+++.++.+++++++.++++|++.|.+.+...+..
T Consensus 38 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 117 (395)
T PRK10054 38 YSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVL 117 (395)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998888888889
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhcc
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQ 296 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~ 296 (559)
.++..|.+++++|++++++.....++|.++||.+++++.. . +|+..|++.+++.++..++. +++||+++
T Consensus 118 ~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~-g~~~~f~~~~~~~~i~~i~~~~~~~~~~~-------- 187 (395)
T PRK10054 118 KAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-Q-SINLPFWLAAICSAFPLVFIQIWVQRSEK-------- 187 (395)
T ss_pred HHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-ccCcHHHHHHHHHHHHHHHHHHHHhcccc--------
Confidence 9999999999999999999999999999999999998875 4 89999999888877765544 33544321
Q ss_pred CCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhCh
Q 008615 297 GKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQ 376 (559)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (559)
+++.+ + ++..+.++.+|++.++...+..++..+....
T Consensus 188 -----~~~~~---------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 224 (395)
T PRK10054 188 -----AIATE---------------T---------------------GSVWSPSVLLQDKALLWFTCSGFLASFVSGA-- 224 (395)
T ss_pred -----ccccc---------------h---------------------hhhhhhhhhccCceehHHHHHHHHHHHHHHH--
Confidence 00000 0 0000124567777777665544443333221
Q ss_pred hhHHHhHHHHHH---HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCc
Q 008615 377 PSVLYYAGPILQ---SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGF 453 (559)
Q Consensus 377 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (559)
+..+.+.+.. +.+.+. ...+.......+..+......+++.||.++|+.+..+..+..++...+... .++
T Consensus 225 --~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~ 297 (395)
T PRK10054 225 --FASCISQYVMVVADSDFAE-KVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFS----GNS 297 (395)
T ss_pred --hhhhHHHHHHHhcccchHH-HHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHc----chH
Confidence 2223333332 233333 455666666666667777888999999999998888877777666555431 122
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHH
Q 008615 454 PLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFL 533 (559)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~ 533 (559)
.+...+. .+..+.......|....++.+..|++.++++.+..+ ...+|..++|.+.|.+.|..|+...|++.+++..+
T Consensus 298 ~~~~~~~-~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~ 375 (395)
T PRK10054 298 LLLWGMS-AAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVA 375 (395)
T ss_pred HHHHHHH-HHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHH
Confidence 2222222 223333333334555577888889999999988765 57789999999999999999988888776665555
Q ss_pred HHHHHH
Q 008615 534 AVLFIV 539 (559)
Q Consensus 534 ~~~~~~ 539 (559)
..++..
T Consensus 376 ~~~~~~ 381 (395)
T PRK10054 376 AWLLML 381 (395)
T ss_pred HHHHHH
Confidence 544433
No 68
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=1.1e-29 Score=250.36 Aligned_cols=359 Identities=17% Similarity=0.116 Sum_probs=259.7
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 008615 104 LFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 183 (559)
+++++..+..|+..+..++.+|.++++ +|++..+.|++.+.+.+++.+++++.|++.||+|||++++++++++
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~-------~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~ 78 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQA-------FTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHH
Confidence 345556678888888888888888766 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh---chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC-
Q 008615 184 ALGALTTAY---APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV- 259 (559)
Q Consensus 184 ~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~- 259 (559)
+++.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+|+.+++.+....
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~ 158 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNL 158 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999988654 4689999999999999999999999999999999999999999999999999999999988764221
Q ss_pred ------------------------CcchHHHhhhHHHHHHHHHHhhc--cCCchHHHHHhhccCCCchhhhHHHHHHHHH
Q 008615 260 ------------------------GGWRYMYGLSAPLALLMGIGMWS--LPPSPRWLLLRAVQGKGSLQEYKEQAISALG 313 (559)
Q Consensus 260 ------------------------~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (559)
.+||++|++.+++.++..++..+ +||.+. ++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~-----------------~~------ 215 (410)
T TIGR00885 159 PHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNH-----------------SD------ 215 (410)
T ss_pred ccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----------------cc------
Confidence 15999999988877766554433 232110 00
Q ss_pred hhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCC
Q 008615 314 KLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFS 393 (559)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (559)
+ ++.....+.++++|+|.++...+..++....+. ....|.+.+.++.+..
T Consensus 216 --------~------------------~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~----~~~s~l~~y~~~~~~~ 265 (410)
T TIGR00885 216 --------A------------------KQISFSASLSRLARIRHYREGVIAQFFYVGVQI----MCWTFIIQYAVRLIPG 265 (410)
T ss_pred --------c------------------ccccchhhHHHHHhChhHHHHHHHHHHHHHHHH----HHHHHHHHHHhhccCC
Confidence 0 000001123456777776665554444433332 3456777777665332
Q ss_pred C-chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccc
Q 008615 394 A-AADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISF 472 (559)
Q Consensus 394 ~-~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (559)
. ...+.........+..+|+++++++.||+++|+.+.+..++..+.+++.... . .......+.+..++....
T Consensus 266 ~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~-----~-~~~~~~~l~~~glf~s~~- 338 (410)
T TIGR00885 266 MTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFA-----G-GHVGLYCLTLCSAFMSLM- 338 (410)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHc-----C-ChHHHHHHHHHHHHHHHH-
Confidence 2 1334445555667789999999999999999998887777766665555531 1 222233333344444333
Q ss_pred ccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc------CchhhHHHHHHHH
Q 008615 473 GPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL------GAENIFLLFAAIA 531 (559)
Q Consensus 473 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~------g~~~~~~~~~~~~ 531 (559)
.|..++...+..+++.+..+.++.... +|+++.|++.|.+.|.. ++...|++...+.
T Consensus 339 fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~ 401 (410)
T TIGR00885 339 FPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCF 401 (410)
T ss_pred HHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcccccCccchHHHHHHHHH
Confidence 367778888888876655455555543 99999999999999964 3556666544333
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=1.3e-29 Score=249.92 Aligned_cols=333 Identities=20% Similarity=0.237 Sum_probs=235.8
Q ss_pred ccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhH
Q 008615 117 IGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGL 196 (559)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~ 196 (559)
.....+.+|.+.++ +|++..+.+++.+++.++..++.+++|+++||+|||+++..+.++.+++.+++.+++++
T Consensus 7 ~~~~~p~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 79 (377)
T PRK11102 7 IDMYLPALPVIAAD-------FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTI 79 (377)
T ss_pred HHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccH
Confidence 33445666766665 89999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHH
Q 008615 197 GVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLM 276 (559)
Q Consensus 197 ~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 276 (559)
+.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..++|.+++.+.+.. +||+.|++.+++.++.
T Consensus 80 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 158 (377)
T PRK11102 80 DQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF-SWHAIFWVLALAAILA 158 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988877 9999999988888776
Q ss_pred HHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhccc
Q 008615 277 GIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQG 355 (559)
Q Consensus 277 ~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (559)
.+.. +++||+++.. ++ + ..+ .++...++++.+++
T Consensus 159 ~~~~~~~~~~~~~~~------~~--------------------~-~~~------------------~~~~~~~~~~~~~~ 193 (377)
T PRK11102 159 AALVFFFIPETLPKE------RR--------------------Q-PFH------------------LRTTIRNFASLFRH 193 (377)
T ss_pred HHHHHHhCCccCccc------cc--------------------C-CCC------------------hHHHHHHHHHHHcC
Confidence 5544 5566643200 00 0 000 00001123456666
Q ss_pred CchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHH
Q 008615 356 PNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVC 434 (559)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 434 (559)
+..+...+...+.+. +...+..+.|.++. ..+.++ .+.+.......++.+++.++.+++.||+++|+.+..+..
T Consensus 194 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 268 (377)
T PRK11102 194 KRVLGYMLASGFSFA----GMFSFLTAGPFVYIELNGVSP-QNFGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLW 268 (377)
T ss_pred hHHHHHHHHHHHHHH----HHHHHHHcCHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 655544333222222 22234445555554 467776 788899999999999999999999999999998888776
Q ss_pred HHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHH-HHHHHHHHh
Q 008615 435 GIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNF-GSNAIVTFA 510 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~i~~~i 510 (559)
+..+..+.+..... .....+.......+..+.... ..+....+..|..| +.++++.++.+.... ++..+++.+
T Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 269 IQFIMGIWLVVSAL-LDLGFWALVVGVAAFVGCVSM-ISSNAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 55443333322211 111222222222222222222 22223345667766 789999999877644 444444443
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=9.7e-30 Score=252.66 Aligned_cols=338 Identities=25% Similarity=0.298 Sum_probs=232.6
Q ss_pred cchhHHHHHHHH-----HHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHh--------HHHHHHHHH
Q 008615 140 LSAVQLGLVVSG-----SLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLG--------VLLVGRLLY 206 (559)
Q Consensus 140 ~s~~~~g~~~s~-----~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~--------~l~~~r~l~ 206 (559)
.++.+.+.+.+. ..++..+++++.|+++||+|||++++.+.++.+++.++++++++++ .++++|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 445555554443 3344457899999999999999999999999999999999998875 478899999
Q ss_pred HhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhccc--------CCCCcchHHHhhhHHHHHHHHH
Q 008615 207 GLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQI--------NAVGGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~~~wr~~f~~~~~~~~~~~~ 278 (559)
|++.+...+....++.|++++++|++..++...+..+|.++++.++..+. ... +||+.|++.+++.++..+
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~-~w~~~~~~~~~~~~~~~~ 185 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEW-GWRIPFLVSAVLVLIGLY 185 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhcc-chHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876543 234 899999988877776665
Q ss_pred HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 279 GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 279 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
+...++|++++...++ ++++.+.+.++.++++..
T Consensus 186 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~ 219 (394)
T TIGR00883 186 LRRNLEETPVFEKAQE----------------------------------------------KHKKKRGPIRETLTKHRK 219 (394)
T ss_pred HHHhcCCChhHHHHHh----------------------------------------------ccccccCCHHHHHHhchH
Confidence 5566777654211100 000112234455555431
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIA 437 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 437 (559)
. ....... .+...........+.|.+++ +.+.+. ...+.......++.+++.++.|++.||++||+.+.....+..
T Consensus 220 ~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~ 296 (394)
T TIGR00883 220 P-FLLGLGL-VIATTTTFYLITTYLPTYLTQTLGLSA-NSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAA 296 (394)
T ss_pred H-HHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCh-hHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 1 1111111 12222223345667888884 456665 678888888889999999999999999999998775544443
Q ss_pred HHH-HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHH-HHHHHHHHHHHHhhHHHH
Q 008615 438 LSL-LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAV-LTNFGSNAIVTFAFSPLK 515 (559)
Q Consensus 438 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~i~~~i~g~l~ 515 (559)
+.. ..+.... ...+.+...... +..++......+...++..|.+|++.|+++.++.. ....+|..++|.+.|.+.
T Consensus 297 ~~~~~~~~~~~--~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 297 LLAVPLLMALL--DSGSFTLFFFLV-LGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred HHHHHHHHHHh--cCCchHHHHHHH-HHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 332 2222111 112222222222 33333332334455688899999999999999854 456678889999999999
Q ss_pred HhcC-chhhHHHHHHH
Q 008615 516 ELLG-AENIFLLFAAI 530 (559)
Q Consensus 516 ~~~g-~~~~~~~~~~~ 530 (559)
+..| +...++..+++
T Consensus 374 ~~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 374 AMTGDWYAIGYYLAAL 389 (394)
T ss_pred HHcCcchhHHHHHHHH
Confidence 9988 55555544433
No 71
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=9.6e-29 Score=244.81 Aligned_cols=336 Identities=15% Similarity=0.119 Sum_probs=238.4
Q ss_pred cccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchh
Q 008615 116 DIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPG 195 (559)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 195 (559)
......+.+|.+.++ +|.++.+.+++.+++.+++.++++++|+++||+|||++++++.++..++.+++.++++
T Consensus 23 ~~~~~~p~~~~i~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~ 95 (394)
T PRK11652 23 AQTIYVPAIADMARD-------LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHS 95 (394)
T ss_pred HHHHHhccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHcc
Confidence 344555666666655 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHH
Q 008615 196 LGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALL 275 (559)
Q Consensus 196 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 275 (559)
++.+++.|++.|++.+...+....++.|+++++++++++++...+..+|..++|.+++.+.+.. +||+.|++.+++.++
T Consensus 96 ~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~-g~~~~f~~~~~~~~~ 174 (394)
T PRK11652 96 LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLF-GWRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ChHHHHHHHHHHHHH
Confidence 9999999999999999888888889999999999999999999999999999999999988776 999999998887766
Q ss_pred HHHH-hhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcc
Q 008615 276 MGIG-MWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQ 354 (559)
Q Consensus 276 ~~~~-~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (559)
..+. .+++||+++.. ++. .+.+..+++.++
T Consensus 175 ~~~~~~~~~~~~~~~~------------~~~-------------------------------------~~~~~~~~~~~~ 205 (394)
T PRK11652 175 VTFSMARWMPETRPAD------------ARR-------------------------------------TRVLASYRTLLS 205 (394)
T ss_pred HHHHHHHhCCccCccc------------cch-------------------------------------hHHHHHHHHHHc
Confidence 5444 35567654200 000 000112345566
Q ss_pred cCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhH
Q 008615 355 GPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGV 433 (559)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 433 (559)
++.++...+........ ...+..+.+.++++ .+.+. ...++......++.+++.++.+++.||.+++. ....
T Consensus 206 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~--~~~~ 278 (394)
T PRK11652 206 NRRFNCYLLMLIGTLAG----IAVFEACSGVLMGAVLGLSS-MTVSILFILPIPAAFFGAWFAGRPNKRFSTLM--WQSV 278 (394)
T ss_pred ChHHHHHHHHHHHHHHH----HHHHHHhChHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 66655544433222221 12334445556665 66666 67788888888888899999999999988322 2222
Q ss_pred HHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHH
Q 008615 434 CGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSP 513 (559)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~ 513 (559)
....++.+.+...........+......++...+.+ ...+....+..|.+| +.++++.++.+....+|+.+++.+.+.
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~ 356 (394)
T PRK11652 279 ICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAG-MLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAM 356 (394)
T ss_pred HHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222222211110111222333333333333333 334555567778877 678999999999999999999998887
Q ss_pred HHHh
Q 008615 514 LKEL 517 (559)
Q Consensus 514 l~~~ 517 (559)
+.+.
T Consensus 357 ~~~~ 360 (394)
T PRK11652 357 LPQT 360 (394)
T ss_pred ccCC
Confidence 7554
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=2e-28 Score=241.80 Aligned_cols=337 Identities=15% Similarity=0.089 Sum_probs=223.8
Q ss_pred cccchhHHHHHHHHHHH-HHHHHHHHHHHhhhhhchHHHH-HHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLY-GALLGSILVYSIADFLGRKREL-IIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~-~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+|.+.+++|++.+.+.+ ++.++.+++|+ .||+||||.+ +.+.++.+++.++.+++++++.+++.+.+.|...+...+
T Consensus 46 ~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 124 (393)
T PRK15011 46 VHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANP 124 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHH
Confidence 89999999999876655 55566655555 9999999875 566666678888888999999887776655555566788
Q ss_pred hhhhhhhccCCcccc--hhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHH
Q 008615 216 GAPLYIAETCPSQIR--GTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLL 292 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~ 292 (559)
...+++.++.++++| +...++.+++.++|.++||++++.+.+.. |||+.|++.++.+++..+.. +++||.++-
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~--- 200 (393)
T PRK15011 125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGF-SFTVMYLSAAVAFIVCGVMVWLFLPSMRKE--- 200 (393)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHhhcCccCCC---
Confidence 888888888776655 34457888999999999999999998877 99999999988877765554 456765420
Q ss_pred hhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC-chhHHHHHHHHHHHH
Q 008615 293 RAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP-NLKAFIIGGGLVLFQ 371 (559)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 371 (559)
+ + + .+ . + .....+++ ..+.........+.
T Consensus 201 -----~-----~-~------------~~-~-------------------~------~~~~~~~~~~~~~~~~~~~~~~~- 230 (393)
T PRK15011 201 -----L-----P-L------------AT-G-------------------T------LEAPRRNRRDTLLLFVICTLMWG- 230 (393)
T ss_pred -----C-----c-c------------cc-c-------------------c------ccccccccccHHHHHHHHHHHHH-
Confidence 0 0 0 00 0 0 00000111 11212111111111
Q ss_pred HhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhh
Q 008615 372 QITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKIL 450 (559)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (559)
....+..+.|.++++ .+.+. .+.+.+.....++.+++.++.|+++||++||+.+..+.....+....+..
T Consensus 231 ---~~~~~~~~~p~~l~~~~~~~~-~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~----- 301 (393)
T PRK15011 231 ---TNSLYIINMPLFIINELHLPE-KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLM----- 301 (393)
T ss_pred ---HHHHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH-----
Confidence 122344567777754 56665 66777777777778889999999999999998777665544443322221
Q ss_pred cCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHH
Q 008615 451 GGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAI 530 (559)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~ 530 (559)
.++.+..+....+...+.+.. .+....+..|..|+ .++++.++.+...++|..+++.+.|.+.+..|+...+.+.+++
T Consensus 302 ~~~~~~~l~~~~l~~~~~g~~-~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~ 379 (393)
T PRK15011 302 AHSPAILLGLQLLNAIYIGIL-GGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVM 379 (393)
T ss_pred HhhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 122222222222111121111 12223556788884 5999999999999999999999999999999998888877777
Q ss_pred HHHHHHHHHh
Q 008615 531 AFLAVLFIVR 540 (559)
Q Consensus 531 ~~~~~~~~~~ 540 (559)
.+++.++.+.
T Consensus 380 ~~~~~~~~~~ 389 (393)
T PRK15011 380 IIATLFCLLR 389 (393)
T ss_pred HHHHHHHHHh
Confidence 7666655443
No 73
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=8.9e-29 Score=243.29 Aligned_cols=357 Identities=14% Similarity=0.095 Sum_probs=259.4
Q ss_pred HhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHH----HHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKREL----IIAAVLYAL 185 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~----~~~~~~~~i 185 (559)
.+.+.+..+...|.+|.+.++ +|.+..++|++.+++.+...++++++|+++||+|||+.. ..+..+..+
T Consensus 13 ~~~~~~~~~~~~p~l~~~l~~-------~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~ 85 (382)
T TIGR00902 13 FFGYFCAYGIFLPFFPAWLKG-------IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 344445556667777777766 899999999999999999999999999999999985433 233222222
Q ss_pred HHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 186 GALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 186 ~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
.++..+++++.+++.|+++|.+.+...|...+++.++ .++|+++++....+.++|.+++|++++.+.+.. |||..
T Consensus 86 --~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~-g~~~~ 160 (382)
T TIGR00902 86 --AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF-DEQNI 160 (382)
T ss_pred --HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc-ChhHH
Confidence 3445678999999999999999988899988887765 477899999999999999999999999999888 99999
Q ss_pred HhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccc
Q 008615 266 YGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKS 345 (559)
Q Consensus 266 f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (559)
|++.++..++..+ .+.++|+++ ++ ++.+ + ++.++
T Consensus 161 f~~~~~~~~~~~~-~~~~~~~~~--------~~----~~~~---------------~------------------~~~~~ 194 (382)
T TIGR00902 161 LAILTAGLAFMLI-GFLIKPTIP--------PK----DAIP---------------E------------------DESQG 194 (382)
T ss_pred HHHHHHHHHHHHH-HHHcCCCCC--------CC----cccc---------------c------------------ccccc
Confidence 9887665333333 333333211 00 0000 0 00011
Q ss_pred cccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 008615 346 EGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGR 425 (559)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 425 (559)
..++++++|+|+++...+...+..... ..+..+.|.++++.|.+. ...+.......++.+++.++.+++.||++.
T Consensus 195 ~~~~~~~l~~~~~~~~l~~~~l~~~~~----~~~~~~~~~~l~~~g~s~-~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~ 269 (382)
T TIGR00902 195 DSAFIALLKNPMNLRFLAAVCLIQGAH----AAYYGFSAIYWQAAGISA-SATGLLWGIGVLAEIIIFAFSNKLFQNCSA 269 (382)
T ss_pred chhHHHHHcChHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHCCCCH-hHHHHHHHHHHHHHHHHHHHhHHHHhhCCH
Confidence 123567888888777665554444433 245567788888888887 788888888889999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHH-HHHHHH
Q 008615 426 RPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVL-TNFGSN 504 (559)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~ 504 (559)
|+.+.++.++..+....+... ++.+..+....+-...++. ..+....++.+. |++.++++.++.+. ...+|.
T Consensus 270 ~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~q~l~g~~~~~-~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~ 342 (382)
T TIGR00902 270 RDLLLISAIACVGRWAIIGAI-----EAFPLIFLLQILHCGTFAV-CHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLI 342 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHhH-----hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHH
Confidence 999998888888887766542 2333333333333333333 333445777787 88899999999874 567899
Q ss_pred HHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 505 AIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 505 ~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
.+++.+.|.+.|..|. ..|++.+++.+++.++
T Consensus 343 ~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 343 AIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999999985 6677777777665443
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=2.9e-28 Score=237.83 Aligned_cols=332 Identities=18% Similarity=0.133 Sum_probs=240.6
Q ss_pred cccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHh
Q 008615 118 GATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLG 197 (559)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~ 197 (559)
....+.+|.+.++ +|++..+.|++.+++.+++.++.++.|+++||+|||+++.++.++.+++.+++ .+++++
T Consensus 17 ~~~~~~lp~l~~~-------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~ 88 (355)
T TIGR00896 17 TSVGPLLPQIRSA-------LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTA 88 (355)
T ss_pred ccCcccHHHHHHH-------hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHH
Confidence 3456677777766 99999999999999999999999999999999999999999999988888887 778999
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCC-cchHHHhhhHHHHHHH
Q 008615 198 VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVG-GWRYMYGLSAPLALLM 276 (559)
Q Consensus 198 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-~wr~~f~~~~~~~~~~ 276 (559)
.+++.|++.|++.+...+....++.|+++ ++|++++++...+.++|..+++.+++.+.+... +||+.|.+.+++.++.
T Consensus 89 ~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 89 LLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999888888888999986 689999999999999999999999888776542 4999998776655443
Q ss_pred HHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC
Q 008615 277 GIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP 356 (559)
Q Consensus 277 ~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (559)
.+ .++|+.++ ++ .+ +++..+...++++|+|
T Consensus 168 ~~--~~~~~~~~--------~~------------------~~----------------------~~~~~~~~~~~~~~~~ 197 (355)
T TIGR00896 168 LL--AWIPQVRR--------RV------------------AA----------------------NQTTTRLTPVRIWRSP 197 (355)
T ss_pred HH--HHhhhhcc--------cc------------------CC----------------------CCCCCCCCCchhhcCH
Confidence 22 22333211 00 00 0000112345667777
Q ss_pred chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC-CcchhhhhHHH
Q 008615 357 NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLG-RRPLLIGGVCG 435 (559)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-~~~~~~~~~~~ 435 (559)
.++...+...+..... .....|.|.++++.+.+. ...+.......++.++++++.|++.||++ ||+.+..+..+
T Consensus 198 ~~~~~~~~~~~~~~~~----~~~~~~lp~~~~~~g~~~-~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~ 272 (355)
T TIGR00896 198 LAWQVTVFFGLQSGLY----YSLIGWLPAILISHGASA-ATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVL 272 (355)
T ss_pred hHHHHHHHHHHHHHHH----HHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHH
Confidence 6665444333322222 245678898998888776 78889999999999999999999999995 55566666666
Q ss_pred HHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeec-ccCCccchhhHHHHHHHHHHHHHHHHHHhhHHH
Q 008615 436 IALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVS-EIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPL 514 (559)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l 514 (559)
.+++.+.+.+.. ... ... .. +..+.......+...+... +..+++.++...++.+...+++..++|.+.|.+
T Consensus 273 ~~~~~~~~~~~~----~~~-~~~-~~-~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l 345 (355)
T TIGR00896 273 QLVGLCGLLFAP----MHG-LWA-WA-LVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVL 345 (355)
T ss_pred HHHHHHHHHHhh----hhH-HHH-HH-HHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655444321 111 111 12 2223333333344334444 334456778999999999999999999999999
Q ss_pred HHhcCc
Q 008615 515 KELLGA 520 (559)
Q Consensus 515 ~~~~g~ 520 (559)
.|..|.
T Consensus 346 ~~~~g~ 351 (355)
T TIGR00896 346 HDISGN 351 (355)
T ss_pred HHHhcc
Confidence 998873
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=3.4e-28 Score=240.92 Aligned_cols=352 Identities=13% Similarity=0.080 Sum_probs=243.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhch-HHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGR-KRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
+|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..++.+.++++.+++.|++.|++.+...+.
T Consensus 33 ~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 112 (418)
T TIGR00889 33 LHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIAL 112 (418)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHH
Confidence 89999999999999999999999999999999965 78889999999899999999999999999999999988777776
Q ss_pred hhhhhh--------ccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchH
Q 008615 217 APLYIA--------ETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPR 288 (559)
Q Consensus 217 ~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~ 288 (559)
..++.. |......|.+.+| .+|.++||.+++.+.... .|+ +|++.++..++..++.+++||+|+
T Consensus 113 ~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~-~~~-~f~~~~~~~~~~~~~~~~~~e~~~ 184 (418)
T TIGR00889 113 TNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIEL-SNI-QLYITAGSSALLGVFALTLPDIPV 184 (418)
T ss_pred HHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccc-hhH-HHHHHHHHHHHHHHHHhcCCCCCC
Confidence 655432 2222233455555 467888888888763322 455 455666666665555667787653
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHH
Q 008615 289 WLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLV 368 (559)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (559)
- + ++ + +.. .++....+.++++|+|.++...+..++.
T Consensus 185 ~---~---~~-----~----------------~~~-----------------~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 220 (418)
T TIGR00889 185 A---K---ST-----A----------------KMS-----------------IKVMLGLDAFILFKNKRMAIFFFFSMLL 220 (418)
T ss_pred C---c---cc-----c----------------ccC-----------------HHHHhhhhHHHHhcCCCeeeHHHHHHHH
Confidence 0 0 00 0 000 0000011234567777776655544443
Q ss_pred HHHHhhChhhHHHhHHHHHHHcCCCC-------chhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHH
Q 008615 369 LFQQITGQPSVLYYAGPILQSAGFSA-------AADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLL 441 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 441 (559)
..... ....+.+.++++.+.++ ....+.......+..+++.++.|++.||+|+|+++..+.++.+++..
T Consensus 221 ~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~ 296 (418)
T TIGR00889 221 GAPLQ----ITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFG 296 (418)
T ss_pred HhHHH----HHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33221 23355566777766443 14568888888889999999999999999999999998888777765
Q ss_pred HHHHHHHhhcCc-hhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHH-HHHHHHHHHHHHhhHHHHHhc-
Q 008615 442 LLSAYYKILGGF-PLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAV-LTNFGSNAIVTFAFSPLKELL- 518 (559)
Q Consensus 442 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~i~~~i~g~l~~~~- 518 (559)
++... .... ....+....+..+.......+....++.|.+|++.|+++.|+.+ ....+|.+++|.+.|.+.|..
T Consensus 297 l~~~~---~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 297 FFAYG---DPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHHHc---CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 55431 0111 12222222222332222333444577889999999999999997 567889999999999999984
Q ss_pred -----CchhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 519 -----GAENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 519 -----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
||+..|.+.+++.++++++.+++.+|+++.
T Consensus 374 ~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 374 AYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 477888888888888888888888876543
No 76
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.2e-29 Score=249.88 Aligned_cols=425 Identities=18% Similarity=0.170 Sum_probs=292.2
Q ss_pred cccchhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 008615 91 QEAFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFL 170 (559)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~ 170 (559)
+..|.|-.....++.. .+.+|..... +...+.+.++ ++.+..+++|+.++....+.+..++.+.+.|||
T Consensus 40 dGG~gWvV~~a~fl~~---~~~~g~~~~~-Gv~~~~~~~~-------f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf 108 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVN---LSTDGLINSF-GLLFEELMDY-------FGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF 108 (509)
T ss_pred CCCeeeeeeHhHHHHH---Hhhhcchhee-hhhHHHHHHH-------hCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc
Confidence 4556665444333222 2333433322 2334444444 899999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhchhHhHHHHH-HHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHH
Q 008615 171 GRKRELIIAAVLYALGALTTAYAPGLGVLLVG-RLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGY 249 (559)
Q Consensus 171 Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~-r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 249 (559)
|.|.+.++|.++.+++.++.++++++|++++. -++.|+|.|..+.....++..|| +|+|+.+.|+..++.++|.++-|
T Consensus 109 g~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~ 187 (509)
T KOG2504|consen 109 GCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFP 187 (509)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHH
Confidence 99999999999999999999999999999886 58999999999999999999887 56799999999999999999999
Q ss_pred HhhhcccCCCCcchHHHhhhHHHHHHHHHHhhcc-CCchHHHHHhhccCCCchhhhHHHHHHHHH-hhcCCCCCCchhhH
Q 008615 250 FVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSL-PPSPRWLLLRAVQGKGSLQEYKEQAISALG-KLRRRPPGDKLSER 327 (559)
Q Consensus 250 ~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 327 (559)
.+.-.+.+.+ |||+.+++.+.+.+-.++....+ |.++.....+.++.+. .....+......+ .....+........
T Consensus 188 ~l~~~l~~~~-G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (509)
T KOG2504|consen 188 PLLKYLLSKY-GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRN-SAASVESTPKPVELRISERDSGLKKLSL 265 (509)
T ss_pred HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcc-ccccccccccccccccccCCCCCCcccc
Confidence 9999999998 99999999988887766655443 3232200000000000 0000000000000 00000000000000
Q ss_pred HHHHHHHHhhhcccc-cccccc---chhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHH
Q 008615 328 QIEDTLVSLKSSYTD-EKSEGS---FLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSV 403 (559)
Q Consensus 328 ~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (559)
.......+.+.+... ..+... ..++++++.++.+.+...+..+.. .....++|.+.++.+++. .++..+..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~----~~p~~~l~~~~~~~g~~~-~~aa~l~S 340 (509)
T KOG2504|consen 266 SNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGF----NVPFVYLPSYAKSLGLSS-NDAAFLLS 340 (509)
T ss_pred cchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHH----HHHHHHHHHHHhhcCCCh-hhhHHHHH
Confidence 000000111111110 111112 257888877776665555555444 457788899999988888 88999999
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCcc--hhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeec
Q 008615 404 VIGVFKLVMTWIAVAKVDDLGRRP--LLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVS 481 (559)
Q Consensus 404 ~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (559)
..++..++++++.|++.|+...++ +..++.++.+++.+.+.. ...+..++..+++.++....+..+....+.
T Consensus 341 iigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~------~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~ 414 (509)
T KOG2504|consen 341 IIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPF------ATTYVGLIVFSILFGFCVGSFSSLTPVILV 414 (509)
T ss_pred HHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHH------hccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988444 344444555555433333 234455556666666666666666656888
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-chhhHHHHHHHHHHHHHHHHh
Q 008615 482 EIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-AENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 482 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 540 (559)
|+++.++-..+.|+...+..++..++|++.|.+.|..| |...|++.+++.+++.++.++
T Consensus 415 ~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~ 474 (509)
T KOG2504|consen 415 DLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLI 474 (509)
T ss_pred HHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 888888888888877765443
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=3.7e-28 Score=242.44 Aligned_cols=352 Identities=16% Similarity=0.087 Sum_probs=225.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHH---hchh-----HhHHHHHHHHHHhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTA---YAPG-----LGVLLVGRLLYGLG 209 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~~~~-----~~~l~~~r~l~G~~ 209 (559)
+|++..++|++.+++.+++.++++++|+++||+|||++++++..+.+++..... .++. +...++.+++.|.+
T Consensus 41 ~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (420)
T PRK09528 41 NGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFG 120 (420)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 899999999999999999999999999999999999999887666655433221 1111 11122233333333
Q ss_pred hhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHH
Q 008615 210 IGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRW 289 (559)
Q Consensus 210 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~ 289 (559)
.....+....+..+ . .+++++.++......++|..++|++++.+.+. +|++.|++.++++++..++.++++++++-
T Consensus 121 ~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~--~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 196 (420)
T PRK09528 121 FLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFNI--NPQINFWLGSGSALILLVLLFFAKPDAPS 196 (420)
T ss_pred hccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHhc--CchHhHHHHHHHHHHHHHHHhcccccccc
Confidence 33333333333222 2 34577888999999999999999999988763 89999999888887766666554332210
Q ss_pred HHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHH
Q 008615 290 LLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVL 369 (559)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (559)
+.+..++ ...+ +++......++.+|+|.++...+......
T Consensus 197 --------------~~~~~~~-----~~~~---------------------~~~~~~~~~~~~l~~~~~~~l~l~~~~~~ 236 (420)
T PRK09528 197 --------------TAKVANA-----LGAN---------------------ASAVSLKDALALLKLPKFWFLVLYVIGVA 236 (420)
T ss_pred --------------hhhhccc-----hhcc---------------------cccccHHHHHHHccCCCeEeehHHHHHHH
Confidence 0000000 0000 00001112345677777665444332222
Q ss_pred HHHhhChhhHHHhHHHHHHH----cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHH
Q 008615 370 FQQITGQPSVLYYAGPILQS----AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSA 445 (559)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 445 (559)
.... ....+.|.++.+ .+.+. ...+.+.....++..++.++.|++.||+++|+.+..+.++.+++.+++.+
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~ 311 (420)
T PRK09528 237 CFYD----VFDQQFPNFFASFFATPEQGT-RVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGF 311 (420)
T ss_pred HHHH----HHHHHHHHHHHHHHhccCcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHh
Confidence 2211 122233433332 23333 56778888888888999999999999999999988888777776666553
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHH-HHHHHHHHHHHHHHhhHHHHHhcCchhhH
Q 008615 446 YYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISL-AVLTNFGSNAIVTFAFSPLKELLGAENIF 524 (559)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~i~~~i~g~l~~~~g~~~~~ 524 (559)
. .+.+..+. ..+..+.......+....+..|.+|++.+++..+. .++...+|.++++.+.|.+.|..|++..|
T Consensus 312 ~-----~~~~~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f 385 (420)
T PRK09528 312 A-----TGPLEVSI-LKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTY 385 (420)
T ss_pred c-----ccHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHH
Confidence 1 23333322 22222222222223334677888899999888765 56778899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 008615 525 LLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~ 544 (559)
.+.+++.++..++.++..++
T Consensus 386 ~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 386 LILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 99888887777666655554
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=8.2e-28 Score=236.63 Aligned_cols=352 Identities=16% Similarity=0.096 Sum_probs=247.7
Q ss_pred cccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchH----HHHHHHHHHHHHHHHH
Q 008615 114 GYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRK----RELIIAAVLYALGALT 189 (559)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr----~~~~~~~~~~~i~~~~ 189 (559)
....+.+.|.+|...++ +|.|..++|++.+++.++..++++++|+++||+||| +.+.++..+. ....
T Consensus 17 ~~~~g~~~p~l~~~l~~-------~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~ 87 (382)
T PRK11128 17 FFAYGVFLPFWSVWLKG-------QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAF 87 (382)
T ss_pred HHHHHHHhhhHHHHHHh-------cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHH
Confidence 34445666777777666 899999999999999999999999999999999984 3333322222 2233
Q ss_pred HHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhh
Q 008615 190 TAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLS 269 (559)
Q Consensus 190 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~ 269 (559)
+..+++++.+++.|++.|++.+...+...+++.++ .++|+++++......++|..+||++++++.+.. |||..|++.
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~-g~~~~f~~~ 164 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF-GEQAILWIL 164 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc-ChhHHHHHH
Confidence 44568899999999999999998999888887776 456888999999999999999999999998888 999999988
Q ss_pred HHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccc
Q 008615 270 APLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSF 349 (559)
Q Consensus 270 ~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (559)
++..++..+..++.||.++ +++.+ .+.++...++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~-------------~~~~~---------------------------------~~~~~~~~~~ 198 (382)
T PRK11128 165 TAGVASMLLGQLLRPTIMP-------------QGESR---------------------------------QQESAGWPAW 198 (382)
T ss_pred HHHHHHHHHHHHccCCCCC-------------ccccc---------------------------------cccccccchH
Confidence 7655554444444444211 00000 0000112346
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchh
Q 008615 350 LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLL 429 (559)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 429 (559)
++++|+|.++...+..++...... ....+.+.++++.|.+. ...+.......++.++..++.+++.||+++|+.+
T Consensus 199 ~~i~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l 273 (382)
T PRK11128 199 KALLKEPTVWRFLLCVSLLQGSHA----AYYGFSAIYWQAAGYSA-STIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL 273 (382)
T ss_pred HHHHcChhHHHHHHHHHHHHHHhH----hHHHHHHHHHHHCCCCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 788888887776655444433322 34456677778888876 6788888888889999999999999999999998
Q ss_pred hhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHH-HHHHHHHHH
Q 008615 430 IGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT-NFGSNAIVT 508 (559)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~ 508 (559)
..+.++.+++.+++... ++.+..+...++.+.+... ..+....+..+. +++++++..++.+.. ..+|..++|
T Consensus 274 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~g~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~ 346 (382)
T PRK11128 274 LLSAICGVVRWGLMGST-----TALPWLIVIQILHCGTFTV-CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMT 346 (382)
T ss_pred HHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88888777766555431 2334333333333333333 233444666666 556678888888644 566778999
Q ss_pred HhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 509 FAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 509 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
.+.|.+.|..|. ..++..+++.+++.+
T Consensus 347 ~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 347 VLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 999999999986 556666655554443
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=1.2e-27 Score=237.11 Aligned_cols=372 Identities=18% Similarity=0.095 Sum_probs=257.1
Q ss_pred HhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----chHH-HHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-----GRKR-ELIIAAVLY 183 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~-~~~~~~~~~ 183 (559)
.+..|+..+.....+|...++ .|++.+++|++..+... .+..+++|+++||+ |||| +++++.++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~-------~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~ 78 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTV-------EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGL 78 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHH
Confidence 455666677777778877776 79999999999777775 69999999999999 8875 788888888
Q ss_pred HHHHHHHHhc---hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCC
Q 008615 184 ALGALTTAYA---PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVG 260 (559)
Q Consensus 184 ~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~ 260 (559)
+++..++++. .+++.+++..++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+...
T Consensus 79 ~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~ 158 (402)
T PRK11902 79 AASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVL 158 (402)
T ss_pred HHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhccc
Confidence 8888887776 4578888888888998998999999999999999999999999999999999999999988877534
Q ss_pred cchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcc
Q 008615 261 GWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSY 340 (559)
Q Consensus 261 ~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (559)
|||..|++.+++.++..+..+++||+++.. + +.++. .
T Consensus 159 gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~-------~-----~~~~~---------------------~---------- 195 (402)
T PRK11902 159 GWGNTYLLMAGLMLAGALTTLWAPEPEVPA-------R-----PPRSL---------------------G---------- 195 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCcccc-------c-----ccchh---------------------H----------
Confidence 999999998888777666556667654210 0 00000 0
Q ss_pred ccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHH-HHHHHHHHHHHHH
Q 008615 341 TDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIG-VFKLVMTWIAVAK 419 (559)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l 419 (559)
++.+..+++++|+|.++...+...+....... ......+.+.++.|.+. ...++.....+ ++.+++.++++++
T Consensus 196 --~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~---~~~~~~~~l~~~~G~~~-~~~g~~~~~~~~~~~i~g~~~~g~l 269 (402)
T PRK11902 196 --EAVVGPLRDFFSRRGAWALLLLIVLYKLGDAF---AGSLSTTFLIRGAGFSA-GEVGIVNKTLGLAATIVGALAGGTL 269 (402)
T ss_pred --HHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHH---HHHHHHHHHHHhcCCCH-HHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 00011356678888877666544443332221 11222344455577776 67777765544 5688999999999
Q ss_pred hhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHH---HHHHHhhcccccccceeecccCCccchhhHHHHH
Q 008615 420 VDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALL---LYVGCYQISFGPISWLMVSEIFPLRTRGRGISLA 496 (559)
Q Consensus 420 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~ 496 (559)
.||+++|+.+..+..+..+..+.+...... .++.+....... +..+............++.+.+|.+ ..++.
T Consensus 270 ~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~ 344 (402)
T PRK11902 270 MVRLGLYRSLMLFGVLQAVSNLGYWVLAVT-PKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSAT----QYALL 344 (402)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH----HHHHH
Confidence 999999988776666655554433322111 122232222221 1222222233344446666766644 44555
Q ss_pred HHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 497 VLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 497 ~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
+....++..+++.+.|.+.|..|+...|.+.+++++++.++.+...+.
T Consensus 345 ~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 345 SALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 656667777777889999999999999998888888777665544433
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=3.2e-28 Score=239.01 Aligned_cols=334 Identities=18% Similarity=0.162 Sum_probs=226.5
Q ss_pred cccccccccc-ccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch-
Q 008615 117 IGATSGATIS-LQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP- 194 (559)
Q Consensus 117 ~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~- 194 (559)
.....+..|. +.++ +|++..+.+++.+++.++++++++++|+++||+|||++++++.++.+++.+++++++
T Consensus 17 ~~~~~~~~~~~~~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~ 89 (366)
T TIGR00886 17 WFAFSPLAVQMIKDD-------LGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQ 89 (366)
T ss_pred HHHhHHhhhHHHHHH-------hCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhh
Confidence 3445556664 5444 999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC---------CCcchHH
Q 008615 195 GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA---------VGGWRYM 265 (559)
Q Consensus 195 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---------~~~wr~~ 265 (559)
+++.+++.|+++|++.+. .+....++.|++|+++|++++++.....++|..+++.+++.+... ..+||+.
T Consensus 90 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~ 168 (366)
T TIGR00886 90 SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWA 168 (366)
T ss_pred hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccch
Confidence 999999999999998664 566788999999999999999999988888887777776655431 1289999
Q ss_pred Hh-hhHHHHHHHHH-HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccc
Q 008615 266 YG-LSAPLALLMGI-GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDE 343 (559)
Q Consensus 266 f~-~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (559)
|+ +.+++..+..+ ...+.+|.|+.. ++++ +. +....... .++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~-~~-----~~~~~~~~-----------------~~~ 212 (366)
T TIGR00886 169 FVIVPAGILLLPALLIFFVGADTPPGK-------------PATG-KL-----SFKGARWS-----------------VGT 212 (366)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCccc-------------ccch-hc-----cccccccc-----------------ccc
Confidence 94 44555444333 334556655300 0000 00 00000000 000
Q ss_pred cccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008615 344 KSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD 422 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 422 (559)
+......+.++++.++...+...+..... ..+..+.|.++++ .+.+. .+++.+.....+..++++++.|++.||
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~g~l~~r 287 (366)
T TIGR00886 213 GALGDQLKVFRDRHTWILALLYSVTFGSF----LGVSSIFAMFFKDQFGLSK-VTAGAYASLGGLLGSLARPLGGAISDR 287 (366)
T ss_pred hhHHHHHHHHhccchhhHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHHhhccchHHHh
Confidence 00012445677776665554433333322 2456677777765 46666 778888888889999999999999999
Q ss_pred cCCcchhhhhHHHHHHHHHHHHHHHHhhcC-chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHH
Q 008615 423 LGRRPLLIGGVCGIALSLLLLSAYYKILGG-FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNF 501 (559)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 501 (559)
+++|+.+..+......+..++.... ... +.+.......+...+.+.. .+..+.+..+..| +.+|+++|+.+..++
T Consensus 288 ~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 363 (366)
T TIGR00886 288 LGGARKLLMSFLGVAMGAFLVVLGL--VSPLSLAVFIVLFVALFFFSGAG-NGSTFALVPHIFR-RATGAVSGLVGAIGN 363 (366)
T ss_pred hccchhHHHHHHHHHHHHHHHHhcC--CCcchHHHHHHHHHHHHHHhccc-cchhhhcchhhch-hhcccHHHHHHHhcc
Confidence 9999887777666655554444321 111 2222222222233333333 3345577788877 689999999988876
Q ss_pred HH
Q 008615 502 GS 503 (559)
Q Consensus 502 ~g 503 (559)
+|
T Consensus 364 ~g 365 (366)
T TIGR00886 364 LG 365 (366)
T ss_pred CC
Confidence 65
No 81
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=3.8e-29 Score=226.87 Aligned_cols=346 Identities=15% Similarity=0.087 Sum_probs=259.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.+-..+++|++.+.+.+.+.+.+++.|.+.||+|+|..+++|++++...++++++.++++.++++|.+||+|.++..+..
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 67788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCccc-chhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhcc
Q 008615 218 PLYIAETCPSQI-RGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQ 296 (559)
Q Consensus 218 ~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~ 296 (559)
.++++|.+|+++ |++++|+.-.+.++|.++||++||.+.+.. |.+.+|++.++++++-..+.+++-|..+
T Consensus 181 lamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~-Gk~aPFlVL~~v~Lld~~L~l~vi~p~~-------- 251 (464)
T KOG3764|consen 181 LAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-GKSAPFLVLAIVLLLDGALQLLVIEPTE-------- 251 (464)
T ss_pred HHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhc-CCcCcHHHHHHHHHHHHHHHHheeCccc--------
Confidence 999999998755 799999999999999999999999999988 9999999999999998887766544221
Q ss_pred CCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhCh
Q 008615 297 GKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQ 376 (559)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (559)
.+.+...+..++++++++|..+..............
T Consensus 252 -----------------------------------------~~~~~~~~~~~~~~Ll~dP~I~~~agai~~~n~~la--- 287 (464)
T KOG3764|consen 252 -----------------------------------------MDPDSTEQGTPMWSLLMDPYILLIAGAITFSNSSLA--- 287 (464)
T ss_pred -----------------------------------------cCccccccCccHHHHHhCchHhhhhcchhhccchHH---
Confidence 000122334467888888866544433222222111
Q ss_pred hhHHHhHHHH-HHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHH--HHHHHHHHHhhcCc
Q 008615 377 PSVLYYAGPI-LQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALS--LLLLSAYYKILGGF 453 (559)
Q Consensus 377 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 453 (559)
..---++.+ .++.. .+..+.|+......+...++..+.|.+.||++..+.+.....+..++ +....+.... ..
T Consensus 288 -fLePtlslwm~e~m~-~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~--~~ 363 (464)
T KOG3764|consen 288 -FLEPTLSLWMLETMF-TPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSI--AQ 363 (464)
T ss_pred -HhCcccHHHHHHhcc-CCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhH--HH
Confidence 111122232 33444 55458899999999999999999999999999555444433333333 3333322110 11
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeecccCCcc---chhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHH
Q 008615 454 PLVAVSALLLYVGCYQISFGPISWLMVSEIFPLR---TRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAI 530 (559)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~ 530 (559)
.+.....+++.++.......|.. .++.|.-..+ ..|...++......+|.++||.+.|.+.+..|+.|...+.++.
T Consensus 364 L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~ 442 (464)
T KOG3764|consen 364 LWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGIL 442 (464)
T ss_pred HhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHH
Confidence 22233334444444444455554 4444544444 7799999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHhh
Q 008615 531 AFLAVLFIVRT 541 (559)
Q Consensus 531 ~~~~~~~~~~~ 541 (559)
.++...++.++
T Consensus 443 n~iyapvl~ll 453 (464)
T KOG3764|consen 443 NLIYAPVLLLL 453 (464)
T ss_pred HHHHHHHHHHH
Confidence 88777655543
No 82
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=2.8e-27 Score=234.33 Aligned_cols=347 Identities=15% Similarity=0.091 Sum_probs=235.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH---Hhc-----hhHhHHHHHHHHHHhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT---AYA-----PGLGVLLVGRLLYGLG 209 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-----~~~~~l~~~r~l~G~~ 209 (559)
+|.+..+.|++.+++.+++.++++++|+++||+|||+.++.+.+..+++.... .+. +.+..+++.|++.|++
T Consensus 33 ~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 112 (396)
T TIGR00882 33 NGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFV 112 (396)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999988777665544332 112 1234456678889998
Q ss_pred hhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc-cCCchH
Q 008615 210 IGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS-LPPSPR 288 (559)
Q Consensus 210 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e~p~ 288 (559)
.+...+....++.+.. +++++.++......++|.++||.+++.+.+ . +||++|++.+++.++..++.++ .+|+|+
T Consensus 113 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 188 (396)
T TIGR00882 113 FSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS-I-DPQIVFWLGSGFALILMLLLMFAKPKAPS 188 (396)
T ss_pred hccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc-c-CchHHHHHHHHHHHHHHHHHHHhCCCCch
Confidence 8888888887777643 334567788888899999999999998765 4 8999999998888876655544 333322
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHH
Q 008615 289 WLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLV 368 (559)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (559)
. ++.++. .+. .+++++..+.++++|++.++...+.....
T Consensus 189 ~----------------~~~~~~---~~~----------------------~~~~~~~~~~~~~l~~~~~~~~~l~~~~~ 227 (396)
T TIGR00882 189 S----------------ATVANA---LGA----------------------NASAFSLKLALELFRQRKFWMFVLYVVGV 227 (396)
T ss_pred h----------------hhhhcc---ccc----------------------ccCCCCHHHHHHHHcCCcHHHHHHHHHHH
Confidence 0 000000 000 00111112356778888766554433222
Q ss_pred HHHHhhChhhHHHhHHHHHHHc----CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHH
Q 008615 369 LFQQITGQPSVLYYAGPILQSA----GFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLS 444 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 444 (559)
.... .....+.+.++.+. +.+. ...+.......+...++.+..+++.||+++|+.+.++.++.++...+..
T Consensus 228 ~~~~----~~~~~~~~~y~~~~~~~~~~~~-~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~ 302 (396)
T TIGR00882 228 ACVY----DVFDQQFANFFTSFFATPQQGT-RVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSS 302 (396)
T ss_pred HHHH----HHHHHHHHHHHHHhccccccch-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 2221 12333445555443 2333 4567778888888888999999999999999999888877777665544
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHH-HHHHHHHHHHHHHHhhHHHHHhcCchhh
Q 008615 445 AYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISL-AVLTNFGSNAIVTFAFSPLKELLGAENI 523 (559)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~i~~~i~g~l~~~~g~~~~ 523 (559)
. ..+.+..+... +..+............+..+..|++.++++.+. .+....+|+.+++.+.|.+.|..|+...
T Consensus 303 ~-----~~~~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~ 376 (396)
T TIGR00882 303 F-----ATTALEVVILK-MLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGA 376 (396)
T ss_pred h-----cCChHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHH
Confidence 2 12333333222 222222222222233456677788888887766 5678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 008615 524 FLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 524 ~~~~~~~~~~~~~~~~~ 540 (559)
|.+.+++.++..++..+
T Consensus 377 f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 377 YLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99988888777765543
No 83
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=5.7e-27 Score=214.68 Aligned_cols=364 Identities=19% Similarity=0.210 Sum_probs=278.1
Q ss_pred HHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH
Q 008615 105 FPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYA 184 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~ 184 (559)
.+....+++|+........+|.+.+- |+++..|.+++..+++.+|.+.+++.|.+.+|+|+|+.+++|+.+++
T Consensus 17 ~~t~lFfl~G~~~~l~diLip~l~~~-------f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~a 89 (422)
T COG0738 17 LLTSLFFLWGFITCLNDILIPHLKEV-------FDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYA 89 (422)
T ss_pred HHHHHHHHHHHHhhcchhhHHHHHHH-------hCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHH
Confidence 34444678888888888888888876 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH---hchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC---
Q 008615 185 LGALTTA---YAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA--- 258 (559)
Q Consensus 185 i~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--- 258 (559)
+++.+.. ...+|..++++-++.|.|.+...+.+..++....++++..+.+++.+..+++|.++||++++.++..
T Consensus 90 vg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~ 169 (422)
T COG0738 90 VGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVA 169 (422)
T ss_pred HHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Confidence 9999984 5678999999999999999999999999999999998889999999999999999999999988762
Q ss_pred ---------------CCcchHHHhhhHHHHHHHHHHhhc--cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCC
Q 008615 259 ---------------VGGWRYMYGLSAPLALLMGIGMWS--LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPG 321 (559)
Q Consensus 259 ---------------~~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (559)
...||++|...+...++..+.... +|+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~--------------------------------- 216 (422)
T COG0738 170 LTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQV--------------------------------- 216 (422)
T ss_pred hccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCc---------------------------------
Confidence 115888888888877776666544 333221
Q ss_pred CchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHH
Q 008615 322 DKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRV 401 (559)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (559)
..+.+.++++....+++++|+++...++.+++..... ....|.+.++.+....+..++...
T Consensus 217 ---------------~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Ev----a~gsfl~~y~~~~~g~~~~~aa~~ 277 (422)
T COG0738 217 ---------------AAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEV----AIGSFLVSYLEELLGLNEQQAAYY 277 (422)
T ss_pred ---------------ccccccccccchHHHHHhChHHHHHHHHHHHHHhHHH----HHHHHHHHHHHhcCCccHHHHHHH
Confidence 0000111111146788999988888877666666554 577788888888444333889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeec
Q 008615 402 SVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVS 481 (559)
Q Consensus 402 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (559)
.+....+.++|++++.++..|+...+.+....++..+.++...+. + ....+. ..+..+++.....|..++...
T Consensus 278 ~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~-----~-g~v~~~-~l~~ig~F~simfPTIfslal 350 (422)
T COG0738 278 LSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALI-----G-GVVALY-ALFLIGLFNSIMFPTIFSLAL 350 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHh-----c-ChHHHH-HHHHHHHHhHHHHHHHHHHHH
Confidence 999999999999999999999999888877665554444444431 2 233333 333444555556677778888
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 482 EIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 482 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
+..| ++...+ |....+..+|+++.|++.|++.|..|....+.....+|.+..+
T Consensus 351 ~~l~-~~ts~~-s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV~ 403 (422)
T COG0738 351 KNLG-EHTSVG-SGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYVL 403 (422)
T ss_pred hccC-cccccc-ceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Confidence 8888 443333 3344456788899999999999999987777655555555543
No 84
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.96 E-value=4.6e-27 Score=263.25 Aligned_cols=345 Identities=15% Similarity=0.028 Sum_probs=242.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHH---HHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhh
Q 008615 142 AVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELII---AAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAP 218 (559)
Q Consensus 142 ~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~---~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 218 (559)
....++..+++.+.+.++++++|+++||+|||+++.. +.++.++..+++...+++++++++|+++|++.+...|+..
T Consensus 51 ~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~ 130 (1140)
T PRK06814 51 NALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKY 130 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHH
Confidence 3568899999999999999999999999999998633 3333333333344458999999999999999999999999
Q ss_pred hhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCC
Q 008615 219 LYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGK 298 (559)
Q Consensus 219 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~ 298 (559)
+++.+++++++|++++++.+++.++|.++||++++++.... +|++.|++.++..++.+++.+++|+++.- +
T Consensus 131 a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 201 (1140)
T PRK06814 131 SILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISG-NFVILVALLMGIAVLGWLASLFIPKTGNA--------A 201 (1140)
T ss_pred HhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhCCCCCCC--------C
Confidence 99999999999999999999999999999999999998877 99999966666666666666667665320 0
Q ss_pred CchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhh
Q 008615 299 GSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPS 378 (559)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (559)
...+. +. .... .....++.+++++.++...+...+.++... .
T Consensus 202 ~~~~~------------------~~---~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 243 (1140)
T PRK06814 202 PDLKI------------------DR---NIIR-------------STITLLKYAKADKRIWLAILGISWFWLVGA----V 243 (1140)
T ss_pred CCCee------------------cc---chHH-------------HHHHHHHHHhcCchHHHHHHHHHHHHHHHH----H
Confidence 00000 00 0000 001135566777777776665555444332 3
Q ss_pred HHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHH----------
Q 008615 379 VLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYY---------- 447 (559)
Q Consensus 379 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 447 (559)
+..+.|.++++ ++.+. ...+++....+++.++|.++.|++.++..+++.+..+.++.+++.+.+.+..
T Consensus 244 ~~~~~p~~~~~~~g~~~-~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (1140)
T PRK06814 244 VLSQLPLLAKETLGGDE-NVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQL 322 (1140)
T ss_pred HHHHhHHHHHHHcCCch-HHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccc
Confidence 55577888766 46665 7899999999999999999999999888777766665555555444333210
Q ss_pred -----HhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh-cCch
Q 008615 448 -----KILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL-LGAE 521 (559)
Q Consensus 448 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-~g~~ 521 (559)
.....+.+...+..+++ +++.....+...+++++..|++.+|+++|+.+++..++..+++.+.|.+.+. .++.
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~ 401 (1140)
T PRK06814 323 KSILVFLSKRHGWRILIDLFGL-AAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIP 401 (1140)
T ss_pred cchhhhhcccccHHHHHHHHHH-HHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHH
Confidence 00012223333333333 3333334444568889999999999999999999999999999999998753 3444
Q ss_pred hhHHHHHHHHHHHH
Q 008615 522 NIFLLFAAIAFLAV 535 (559)
Q Consensus 522 ~~~~~~~~~~~~~~ 535 (559)
..+++.+++.++..
T Consensus 402 ~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 402 WIILFIALANLIVA 415 (1140)
T ss_pred HHHHHHHHHHHHHH
Confidence 55554444433333
No 85
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.96 E-value=2.6e-26 Score=227.62 Aligned_cols=396 Identities=15% Similarity=0.106 Sum_probs=240.7
Q ss_pred hHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHH
Q 008615 97 SSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKREL 176 (559)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~ 176 (559)
++.+..+...++......+.....+..++.+..+ +|- .....|+.+.+.++.+++.++.|+++|.||||.++
T Consensus 40 ~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-------iG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~ 111 (599)
T PF06609_consen 40 PRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-------IGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFF 111 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-------cCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Confidence 3344333334443333333444445555666655 774 57788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 008615 177 IIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQI 256 (559)
Q Consensus 177 ~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 256 (559)
+.+.++..+|++.++.++|...++++..+.|+|.|.... ....++|..|.|.|....++.....-....+++.++..+.
T Consensus 112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 999999999999999999999999999999999886664 5566899999999988887777665555557777777665
Q ss_pred CCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHh------------------hcCC
Q 008615 257 NAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGK------------------LRRR 318 (559)
Q Consensus 257 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~ 318 (559)
... +|||.|++.++...+.+++.+++..+|++-..+.+ ...+.++ .+.++. ..+.
T Consensus 191 ~~~-~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~-----~~s~~~~-l~~lD~IG~~L~~~Gl~LfLlgl~wgG~ 263 (599)
T PF06609_consen 191 AHS-GWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGR-----KLSKREQ-LKELDWIGIFLFIAGLALFLLGLSWGGY 263 (599)
T ss_pred cCC-CcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccc-----cCcHHHH-HHHhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 555 99999999998877766555333233332211110 0011111 111111 0111
Q ss_pred CCCCchhhHHHHHHH---HH-----hhhccccccccccchhhcccCc-hhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH
Q 008615 319 PPGDKLSERQIEDTL---VS-----LKSSYTDEKSEGSFLEVFQGPN-LKAFIIGGGLVLFQQITGQPSVLYYAGPILQS 389 (559)
Q Consensus 319 ~~~~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (559)
...++.+..-+.-.. .- .-|.....+++.--.++||+++ +...+++.++....+ +....+-|.....
T Consensus 264 ~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~----~s~~~l~p~~~~~ 339 (599)
T PF06609_consen 264 PYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNF----FSVNILWPQQVVN 339 (599)
T ss_pred CCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHH----HHHHHHHHHHHhh
Confidence 112222221111100 00 0011111122233456777743 222222222222222 2333344443333
Q ss_pred -cCCCCc--hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchh-hhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHH
Q 008615 390 -AGFSAA--ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLL-IGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYV 465 (559)
Q Consensus 390 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 465 (559)
++.+.. ...++...+.+++..+|.++.|.+..+++|-|.. +++.+++.+++.++.... .++....+...++..
T Consensus 340 vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~---~~n~~~~i~~~~l~g 416 (599)
T PF06609_consen 340 VFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVR---PDNKNAAIAFLVLAG 416 (599)
T ss_pred hccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHcc---CCCcchHHHHHHHHH
Confidence 222221 2467788888899999999999999988875554 456555555545554332 222222233333333
Q ss_pred HHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008615 466 GCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE 516 (559)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 516 (559)
.+.+.... ......+-..|++.-|++.|+..+++.+|+.++..++..+..
T Consensus 417 ~giG~~~~-~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~ 466 (599)
T PF06609_consen 417 FGIGGILV-PAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFT 466 (599)
T ss_pred HhHHHHHH-HHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33333322 333566667899999999999999999999999999876553
No 86
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=2.9e-26 Score=258.02 Aligned_cols=342 Identities=17% Similarity=0.054 Sum_probs=236.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHH---hchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 141 SAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTA---YAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 141 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~---~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+....+++.+++.+++.++++++|+++||+|||++++++.++.+++.+++. .+++++.++++|+++|++.+...+..
T Consensus 45 ~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 124 (1146)
T PRK08633 45 QVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAK 124 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHH
Confidence 456689999999999999999999999999999999998877666555443 45789999999999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC--------CCcchHHHhhhHHHHH-HHHHHhhccCCchH
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA--------VGGWRYMYGLSAPLAL-LMGIGMWSLPPSPR 288 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~~~wr~~f~~~~~~~~-~~~~~~~~~~e~p~ 288 (559)
.+++.|++|+++|++++++...+..+|.++|+++++++... ..+|++.+.+.++... +.+++.+.+||+|.
T Consensus 125 ~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (1146)
T PRK08633 125 YGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPA 204 (1146)
T ss_pred HhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCC
Confidence 99999999999999999999999999999999999998765 3245555544443333 33444456777653
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHH
Q 008615 289 WLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLV 368 (559)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (559)
....+ . +..... ........++.+++++.++..++...+.
T Consensus 205 ~~~~~---------~---------------~~~~~~----------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 244 (1146)
T PRK08633 205 AAPEV---------F---------------DKKKYL----------------FPKLLWRNLKLLRSDRVLWLAIIGLSYF 244 (1146)
T ss_pred CCccc---------c---------------cccccc----------------cHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 11000 0 000000 0000011245567777666555544443
Q ss_pred HHHHhhChhhHHHhHHHHHH-HcCCCCch-hHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHH
Q 008615 369 LFQQITGQPSVLYYAGPILQ-SAGFSAAA-DATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAY 446 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (559)
++... .+..+.|.++. ..+.+. . ..+++.....++.+++.++.+++.||+++++.+.++.++.+++.+++.+.
T Consensus 245 ~~~~~----~~~~~~~~~~~~~~g~s~-~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1146)
T PRK08633 245 WFISQ----LAQANFPAYAKEVLGLDN-TFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTA 319 (1146)
T ss_pred HHHHH----HHHHhhHHHHHHHhCCCc-HHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHh
Confidence 33322 34445566654 467766 5 78889999999999999999999999999988887777777666655532
Q ss_pred HHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC--chhhH
Q 008615 447 YKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG--AENIF 524 (559)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g--~~~~~ 524 (559)
.+.+..++.. ++.+++.....+...+++.+..|++.||+++|+.+++..++.++++.+.+.+.. .+ +...+
T Consensus 320 -----~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~ 392 (1146)
T PRK08633 320 -----PSLASVLVLF-FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLF 392 (1146)
T ss_pred -----hhHHHHHHHH-HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHH
Confidence 1222222333 333333333334445788899999999999999999999998877776655543 33 33445
Q ss_pred HHHHHHHHHH
Q 008615 525 LLFAAIAFLA 534 (559)
Q Consensus 525 ~~~~~~~~~~ 534 (559)
++.+.+.++.
T Consensus 393 ~~~~~~~~~~ 402 (1146)
T PRK08633 393 YLIALVTLIG 402 (1146)
T ss_pred HHHHHHHHHH
Confidence 4444444333
No 87
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.95 E-value=7.2e-26 Score=226.04 Aligned_cols=378 Identities=21% Similarity=0.203 Sum_probs=273.5
Q ss_pred cchhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhch
Q 008615 93 AFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGR 172 (559)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr 172 (559)
+...+..|..-++..++..+......++ ..+ ..-|+..++++..+..+...+.++++|.++||+.|
T Consensus 9 ~~~Fr~lw~a~~iS~lG~~~~~va~~wl-------v~~-------lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~dr 74 (524)
T PF05977_consen 9 NRNFRRLWIAQLISNLGDWMQTVALAWL-------VTQ-------LTGSPLMVALVQAASTLPILLLSLFAGALADRFDR 74 (524)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH-------HHH-------HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 3445556666666666666665544442 222 45589999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-----hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHH
Q 008615 173 KRELIIAAVLYALGALTTAYA-----PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILL 247 (559)
Q Consensus 173 r~~~~~~~~~~~i~~~~~~~~-----~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 247 (559)
|++++.+.++.++..++.++. .+.+.+++.-++.|++.+...|...+++.|..|+++...++++.+...++..++
T Consensus 75 rrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i 154 (524)
T PF05977_consen 75 RRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII 154 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence 999999998877665555432 478899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhH
Q 008615 248 GYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSER 327 (559)
Q Consensus 248 g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (559)
||.++|.++... |-.+.|++.++..++.++.....++.+. +.+. ..| +.
T Consensus 155 GPalgG~Lva~~-G~~~~f~inalsfl~~i~~l~~~~~~~~-------~~~~----~~e---~~---------------- 203 (524)
T PF05977_consen 155 GPALGGILVAFF-GAAAAFLINALSFLISILALLRWKPPPP-------PSSL----PRE---RF---------------- 203 (524)
T ss_pred cchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcccccc-------cccc----chh---hh----------------
Confidence 999999988877 8888999888776665544443332111 0000 000 00
Q ss_pred HHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHH
Q 008615 328 QIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIG 406 (559)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 406 (559)
.+.-+..++-+.++|..+..++...+..+.. ..+...+|.+.++ .+.++ ...|++....+
T Consensus 204 --------------~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~----~a~~aLlPl~a~~~l~~~a-~~yGll~a~~g 264 (524)
T PF05977_consen 204 --------------FSALREGLRYVRSSPPLRSVLLRSFLFNLFA----SAVWALLPLFARDVLGGGA-SGYGLLLAAFG 264 (524)
T ss_pred --------------hhhHHHHHHHHhcchHHHHHHHHHHHHHHhh----hHHHHhhhHHHHHHhCCcH-HHHHHHHHHHH
Confidence 0000112334444555554443333322221 1234456777655 55555 78999999999
Q ss_pred HHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCc
Q 008615 407 VFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPL 486 (559)
Q Consensus 407 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 486 (559)
++.++|.++.+++.+|+++++++..+.++.+++++.+++. .+.+.....+++. |...........+..++..|+
T Consensus 265 vGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~-----~~~~~~~~~l~l~-G~~~~~~~~~~~t~~Q~~~P~ 338 (524)
T PF05977_consen 265 VGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALS-----PSFWLALIALFLA-GAAWIIANSSLNTLVQLSVPD 338 (524)
T ss_pred HHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcc-----hHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCCH
Confidence 9999999999999999999998888888877777666642 2334333333333 333333344445778899999
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHh
Q 008615 487 RTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 487 ~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 540 (559)
+.||+++++.++....+..+|..+.|.+.+..|....+.+.+++.+++.++.+.
T Consensus 339 ~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 339 WVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888888777666666554443
No 88
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.95 E-value=7e-25 Score=197.83 Aligned_cols=355 Identities=22% Similarity=0.195 Sum_probs=271.3
Q ss_pred cccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchh
Q 008615 116 DIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPG 195 (559)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 195 (559)
....++|.++.+..+ +|+|.+.+|+++++..+..++.+++..+++.|+|.++.+..++++.++|.++-... +
T Consensus 27 ~itsvgPLL~~Ir~~-------~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~ 98 (395)
T COG2807 27 AITSVGPLLDEIRQD-------LGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-G 98 (395)
T ss_pred hhhhhhhhHHHHHHH-------hcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-c
Confidence 345566677766666 99999999999999999999999999999999999999999999999999998887 7
Q ss_pred HhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHH
Q 008615 196 LGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALL 275 (559)
Q Consensus 196 ~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 275 (559)
.+.++.+-.+.|.|.+......+.++.+.|| |+-+..+++|.+..++|..+++.+...+.++..+||....+.+.++++
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~all 177 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALL 177 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHH
Confidence 8889999999999999999999999999997 558999999999999999999999988887766899999999999998
Q ss_pred HHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhccc
Q 008615 276 MGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQG 355 (559)
Q Consensus 276 ~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (559)
.++.++.-. .|. + ....+.+..+...++|+
T Consensus 178 Al~~WlPq~--~r~----------------------------~--------------------~~~~~~~~~~~~~vw~~ 207 (395)
T COG2807 178 ALLIWLPQA--LRE----------------------------Q--------------------AASIATKLVSVRKVWRS 207 (395)
T ss_pred HHHHHhhhc--ccc----------------------------c--------------------ccccccccccccccccC
Confidence 887776421 110 0 00112222344568999
Q ss_pred CchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-cchhhhhHH
Q 008615 356 PNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGR-RPLLIGGVC 434 (559)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~ 434 (559)
|.-|.+.+.+.+..+.+ +....|+|.++.+.|++. .++|.+.....+..++.++....+.+|... |+..+....
T Consensus 208 ~~aW~vtLfmGlqS~~~----Y~~~~WLP~ili~~G~sa-~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~ 282 (395)
T COG2807 208 PLAWQVTLFMGLQSLLY----YIVIGWLPAILIDRGLSA-AEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALL 282 (395)
T ss_pred chhHHHHHHHHhhHHHH----HHHHHHHHHHHHHcCCCH-HHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 98888776665555544 468899999999999998 899999999999999999999999997654 555555555
Q ss_pred HHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeeccc-CCccchhhHHHHHHHHHHHHHHHHHHhhHH
Q 008615 435 GIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEI-FPLRTRGRGISLAVLTNFGSNAIVTFAFSP 513 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~ 513 (559)
++.++.+.+.+. + .+.+... .+..+....+..++..+.+... -.++..+.-.|+.+.++++-++.+|.++|.
T Consensus 283 ~~l~G~~G~~~~---P-~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~ 355 (395)
T COG2807 283 LMLVGLVGLLLA---P-GQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGF 355 (395)
T ss_pred HHHHHHHHHHHh---h-hhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhH
Confidence 555655555432 1 2222222 1222333233344443444443 345777888899999999999999999999
Q ss_pred HHHhcC-chhhHHHHHHHHHHHHHHHHhh
Q 008615 514 LKELLG-AENIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 514 l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 541 (559)
+.|..| |...+..++.+.++..+.-+..
T Consensus 356 lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a 384 (395)
T COG2807 356 LHDATGSWSAPLVLLALATLLMLIFGLRA 384 (395)
T ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHhhc
Confidence 999988 5555655555555555544443
No 89
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=2.4e-25 Score=223.40 Aligned_cols=391 Identities=12% Similarity=0.083 Sum_probs=237.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh-hchHHHHHHHHHHHHHHHHHHHhchhHhH-HHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF-LGRKRELIIAAVLYALGALTTAYAPGLGV-LLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~-l~~~r~l~G~~~g~~~~ 215 (559)
+|++..+.+++.+.+.....+..+++|+++|| +||||+++++.+++++++++++++.+... ++++|+++|+|.|...+
T Consensus 45 lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~ 124 (489)
T PRK10207 45 LGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKA 124 (489)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccC
Confidence 89999999999999999999999999999999 99999999999999999999999876554 55789999999999999
Q ss_pred hhhhhhhccCCcc--cchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHh
Q 008615 216 GAPLYIAETCPSQ--IRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLR 293 (559)
Q Consensus 216 ~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 293 (559)
...+++.|.+|++ +|+++++++..+.++|.++||.+++++.+.. |||+.|++.++..++..+..++.++..+ .+
T Consensus 125 ~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~-gw~~~F~i~~i~~~~~~~~~~~~~~~~~---~~ 200 (489)
T PRK10207 125 NPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF-GYSVTYNLCGAGLIIALLVYFACRGMVK---DI 200 (489)
T ss_pred CHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh-ChHHHHHHHHHHHHHHHHHHHHcchhhc---cc
Confidence 9999999999877 4578999999999999999999999999888 9999999965543333333333332111 00
Q ss_pred hccCCCchhhhHHHHHH---------HHHhhcCCCCCCchhhHHH-HHHHHHh-hhccccccccccchhhcccCchhHHH
Q 008615 294 AVQGKGSLQEYKEQAIS---------ALGKLRRRPPGDKLSERQI-EDTLVSL-KSSYTDEKSEGSFLEVFQGPNLKAFI 362 (559)
Q Consensus 294 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (559)
+.+++.+..+....... ......... ....... ....... .--.++.+ ..+.+|++.+....
T Consensus 201 ~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~f~~~~~~----~~~~~r~r~~~~~~ 273 (489)
T PRK10207 201 GSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNV---EVANLVLIVLSIVVTIIFFREAFK----LDKTGRNKMFVAFV 273 (489)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHHHHHHHH
Confidence 00000000000000000 000000000 0000000 0000000 00000000 01344544333222
Q ss_pred HH--HHHHHHHHhhChhhHHHhHHHHHHH-cCCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch-------h
Q 008615 363 IG--GGLVLFQQITGQPSVLYYAGPILQS-AGFS---AAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL-------L 429 (559)
Q Consensus 363 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-------~ 429 (559)
+. ..+.+..+ ....+..+.+.++ .... -......+.....+..++..++.+++.||+++|+. +
T Consensus 274 l~~~~~~f~~~~----~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~ 349 (489)
T PRK10207 274 LMLEAVVFYILY----AQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHH----HHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHH
Confidence 11 11122222 2232333444442 2111 00133445555556676778888999999998873 6
Q ss_pred hhhHHHHHHHHHHHHHHH---H-hhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHH
Q 008615 430 IGGVCGIALSLLLLSAYY---K-ILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNA 505 (559)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 505 (559)
.+++++.+++++.+.... . .....+.+.++...++.+.......+....++.+..|++.++.++|+.+....+|+.
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~ 429 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFL 429 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 677777776665443211 1 111122333334444455555556666668888889999999999999999999999
Q ss_pred HHHHhhHHHHH----------hcCchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 506 IVTFAFSPLKE----------LLGAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 506 i~~~i~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
++..+...... ...+.+.|...++..+++.++.+...|
T Consensus 430 lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 430 LGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98887754421 112345666666666666655554433
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=2.1e-26 Score=207.86 Aligned_cols=357 Identities=19% Similarity=0.148 Sum_probs=224.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.+.+....|.+.+.|++++.+.++.+|.++||+|||+++++|++..++..++.+.+.||..++++|++.|+..| ...+.
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~ 141 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVI 141 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHH
Confidence 34577788999999999999999999999999999999999999999999999999999777777999999988 67888
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccC---CCCcchHH--HhhhHHHHHH-HHHHhhccCCchHHHH
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIN---AVGGWRYM--YGLSAPLALL-MGIGMWSLPPSPRWLL 291 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---~~~~wr~~--f~~~~~~~~~-~~~~~~~~~e~p~~~~ 291 (559)
.++++|.+++|+|+++++.....+++|.++||.+|+++.. ..+.+... -++..++... .....+++||+-....
T Consensus 142 rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk 221 (451)
T KOG2615|consen 142 RAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRK 221 (451)
T ss_pred HHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchh
Confidence 9999999999999999999999999999999999999877 22112111 1222222222 3334577899842100
Q ss_pred HhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHH---HHHH
Q 008615 292 LRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIG---GGLV 368 (559)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 368 (559)
++ +.+....++.+... +.. +. ....-...+||+.....+.. +.+.
T Consensus 222 ~~------~~~~~~~~~~~~~~---------------------~~~----~~-~~~~~v~~lrn~p~~~~i~~~~i~~l~ 269 (451)
T KOG2615|consen 222 RN------DEHSTLQEAADDRL---------------------ALL----KF-ARIFKVAALRNPPLLDFISVLRIFGLH 269 (451)
T ss_pred hc------ccccchhhhhhhhh---------------------hhc----ch-hhhhhhhhhcCccccchHHHHHHHHHH
Confidence 00 00000000000000 000 00 00011123334332221111 1122
Q ss_pred HHHHhhChhhHHHhHHHH-HHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC--CcchhhhhHHHHHHHHHHHHH
Q 008615 369 LFQQITGQPSVLYYAGPI-LQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLG--RRPLLIGGVCGIALSLLLLSA 445 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~~~~~~~~~ 445 (559)
.+.+...+..+.++...+ -..+|+++ .+.|.+....++...+......+..+|.+ .+..+..+..++.-.++++..
T Consensus 270 ~~ly~~l~s~~~~t~~~l~~~rfg~ss-~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~ 348 (451)
T KOG2615|consen 270 YFLYLELFSGLENTVLFLTHGRFGYSS-MQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSL 348 (451)
T ss_pred HHHHHHHHHHHHhhHHHhhcCccCCCh-hhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhc
Confidence 222222222333333333 15578888 77888887777777777766666666655 333444444444443333332
Q ss_pred HHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchhhH
Q 008615 446 YYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL-GAENIF 524 (559)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-g~~~~~ 524 (559)
...+..+.....+....... ..+....+.....|+++||+++|+....+.++-++||.+.|.+..+. +-+..+
T Consensus 349 -----~~~~~~l~~~s~l~sf~~A~-~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~ 422 (451)
T KOG2615|consen 349 -----ARTPVVLYLGSTLKSFSTAS-VVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAY 422 (451)
T ss_pred -----cccchhhhHHHHHHHHHHHH-hhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCcee
Confidence 12233333333444333333 34445578888999999999999999999999999999998887643 333444
Q ss_pred HHHHHHHHHH
Q 008615 525 LLFAAIAFLA 534 (559)
Q Consensus 525 ~~~~~~~~~~ 534 (559)
...+.+.++.
T Consensus 423 ~~~~~L~~~~ 432 (451)
T KOG2615|consen 423 IAWGALLLIP 432 (451)
T ss_pred eehHHHHHHH
Confidence 4444444444
No 91
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=4.3e-26 Score=234.98 Aligned_cols=373 Identities=18% Similarity=0.198 Sum_probs=255.6
Q ss_pred HHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHH
Q 008615 109 GGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGAL 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~ 188 (559)
..+..+...+.++..++.+.++ |+++..+.|++.+.+.++++++.++.|+++||+|||+++.++.++++++++
T Consensus 41 ~~~~~~~~~g~~~~~l~~iek~-------F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~l 113 (633)
T TIGR00805 41 AQLQGLLYNGLVNSSLTTIERR-------FKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSF 113 (633)
T ss_pred HHHHHHHHHHHHHhhchhhhhh-------hCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHH
Confidence 4444455566777777777666 999999999999999999999999999999999999999999999999999
Q ss_pred HHHhch---------------------------------------------------hHhHHHHHHHHHHhhhhhhhhhh
Q 008615 189 TTAYAP---------------------------------------------------GLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 189 ~~~~~~---------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
++++.+ .+..++++|+++|+|.+..++..
T Consensus 114 l~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~ 193 (633)
T TIGR00805 114 LLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLG 193 (633)
T ss_pred HHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcC
Confidence 998763 24567889999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCC---------------------cchHHHhhhHHHHHHH
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVG---------------------GWRYMYGLSAPLALLM 276 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~---------------------~wr~~f~~~~~~~~~~ 276 (559)
.+++.|++|+++|+++++++..+..+|.++|+++++++.+.+. +||..|++.+++.++.
T Consensus 194 ~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~ 273 (633)
T TIGR00805 194 ISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLT 273 (633)
T ss_pred chhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998775321 2777888888888877
Q ss_pred HHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC
Q 008615 277 GIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP 356 (559)
Q Consensus 277 ~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (559)
.+.++++|+..+. +... .+.+..++. ......+..+ .... ...+.....++.++++|
T Consensus 274 ~v~l~~~p~~lp~--------~~~~-~~~~~~~~~--~~~~~~~~~~---~~~~---------~~~~~~~~~~~~Ll~n~ 330 (633)
T TIGR00805 274 SIPFFFFPKALPK--------EGKR-VNVDVHETE--KLEKSEDKSR---KKNS---------DITKDFPKIIKRLLCNP 330 (633)
T ss_pred HHHHHhCccccCC--------cccc-cchhhhhhh--cccccccccc---hhhh---------hhHHHHHHHHHHHHcCc
Confidence 6666667664210 0000 000000000 0000000000 0000 00011123466789998
Q ss_pred chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHH-HHHHHHHHHHHHhhhcCC--cchhhhh
Q 008615 357 NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGV-FKLVMTWIAVAKVDDLGR--RPLLIGG 432 (559)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~--~~~~~~~ 432 (559)
.++...+..++..... ..+..|.|.++++ ++.+. ..++++.....+ +.++|.+++|+++||++. |+.+..+
T Consensus 331 ~f~~~~l~~~~~~~~~----~~~~~~lP~yl~~~~g~s~-~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~ 405 (633)
T TIGR00805 331 IYMLVILAQVIDSLAF----NGYITFLPKYLENQYGISS-AEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFA 405 (633)
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHcCCcH-HHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHH
Confidence 7776666555544433 3577789999875 66665 778877776665 568999999999999985 4555555
Q ss_pred HHHHHHHHHHHHHHHHh-----------------------h----------c----------------------------
Q 008615 433 VCGIALSLLLLSAYYKI-----------------------L----------G---------------------------- 451 (559)
Q Consensus 433 ~~~~~~~~~~~~~~~~~-----------------------~----------~---------------------------- 451 (559)
.++..++.++....... . .
T Consensus 406 ~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~ 485 (633)
T TIGR00805 406 ICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGT 485 (633)
T ss_pred HHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCC
Confidence 55555554332210000 0 0
Q ss_pred ----------------------C------ch-hH-HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHH-H
Q 008615 452 ----------------------G------FP-LV-AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT-N 500 (559)
Q Consensus 452 ----------------------~------~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~ 500 (559)
. .. .. .++.+++...+......|.. ..+-..+|+++|+.+.|+...+ +
T Consensus 486 ~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~-~i~lR~V~~~~rs~alg~~~~~~r 564 (633)
T TIGR00805 486 GSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLY-MVLLRVVNPEEKSLAIGLQWLCMR 564 (633)
T ss_pred CCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchh-eEEeeccCcccchHHhhHHHHHHH
Confidence 0 00 11 11222222233333444555 5666788999999999999876 6
Q ss_pred HHHHHHHHHhhHHHHHh
Q 008615 501 FGSNAIVTFAFSPLKEL 517 (559)
Q Consensus 501 ~~g~~i~~~i~g~l~~~ 517 (559)
-+|.+-+|+++|.++|.
T Consensus 565 llg~iP~pi~fG~~iD~ 581 (633)
T TIGR00805 565 VFATIPAPILFGLLIDV 581 (633)
T ss_pred HhcCCChhHHHhhhhhc
Confidence 66889999999999985
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=9.9e-26 Score=226.83 Aligned_cols=329 Identities=16% Similarity=0.109 Sum_probs=226.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh----hchH-HHHHHHHHHHHHHHHHHHhchh------HhHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF----LGRK-RELIIAAVLYALGALTTAYAPG------LGVLLVGRLLY 206 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~ 206 (559)
+|+++.++|++.++..+..++..|+.|+++|| +||| +.++.+...++++.+++.+.++ +..+++.+++.
T Consensus 30 ~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (437)
T TIGR00792 30 LGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILL 109 (437)
T ss_pred cCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999997 6874 4677888888888888877654 45667788889
Q ss_pred HhhhhhhhhhhhhhhhccC-CcccchhhhhHHHHHHHHHHHHHHHhhhcccC------CCCcchHHHhhhHHHHHHHHHH
Q 008615 207 GLGIGLAMHGAPLYIAETC-PSQIRGTLISLKELFIVLGILLGYFVGSFQIN------AVGGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~------~~~~wr~~f~~~~~~~~~~~~~ 279 (559)
+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+.. ...+||+.+++.++++++..+.
T Consensus 110 ~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~ 189 (437)
T TIGR00792 110 GLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLII 189 (437)
T ss_pred HHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHH
Confidence 9988887778888888887 46889999999999888888777666544432 1228999999999888876655
Q ss_pred h-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 280 M-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 280 ~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
. +..+|.++. + +..+ .++.+.+..++.++++|.+
T Consensus 190 ~~~~~~e~~~~--------------~--------------~~~~-----------------~~~~~~~~~~~~l~~~~~~ 224 (437)
T TIGR00792 190 CFFGTKERYSE--------------I--------------PKNI-----------------EKKLSLKQIFKALFKNDQL 224 (437)
T ss_pred HHcCCEecCCC--------------C--------------Cccc-----------------ccCCCHHHHHHHHhCCHHH
Confidence 4 445553310 0 0000 0000011234567778777
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+...+..++..+... ....+.+.+.+....+. ...+.+.....++.+++.++.+++.||+|+|+.+..+.++.++
T Consensus 225 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 225 LILCLAYLFYNLAFN----IKNGVQVYYFTYVLGDP-ELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHH----HHcchhheeEeeecCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 665554444433322 22223333333322222 5566677777899999999999999999999999888877777
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC-------ccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP-------LRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
+.+.+.+. .++.+...+ ..+..++......+..+++..|..+ ++.+|.+.|+.+++..+|..+++.+.
T Consensus 300 ~~~~~~~~----~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 300 GYLIFFFA----GSNLPLILV-LIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHc----chhHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555431 122222222 2222333323334455566677654 56689999999999999999999999
Q ss_pred HHHHHhcCch
Q 008615 512 SPLKELLGAE 521 (559)
Q Consensus 512 g~l~~~~g~~ 521 (559)
|.+.+..|+.
T Consensus 375 g~ll~~~G~~ 384 (437)
T TIGR00792 375 GLILGIIGYV 384 (437)
T ss_pred HHHHHHcCCC
Confidence 9999988763
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=1.4e-24 Score=217.98 Aligned_cols=393 Identities=12% Similarity=0.043 Sum_probs=245.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh-hchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF-LGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
+|++..+.+++.+.+.+++.++++++|+++|| +|||++++++.++.+++.++.+++++++.++++|++.|+|.|...+.
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~ 122 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKAN 122 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCC
Confidence 78999999999999999999999999999999 89999999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCccc---chhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHh
Q 008615 217 APLYIAETCPSQI---RGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLR 293 (559)
Q Consensus 217 ~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 293 (559)
..++++|++|+++ |+++++++..+.++|.++||++++++.+.. |||+.|++.++..++..+..++.++..+ .+
T Consensus 123 ~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~-g~~~~f~~~~~~~~~~~l~~~~~~~~~~---~~ 198 (475)
T TIGR00924 123 PSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENY-GYHVGFNLAAVGMVIGLLTFFAGRHMLR---DI 198 (475)
T ss_pred HHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHcccccc---cC
Confidence 9999999998754 888999999999999999999999988877 8999999988665554444433322110 00
Q ss_pred hccCCCchhhhH-HHHHHHH----------Hh-hcCCCCCCchhhHHHHH---HHHHhhhccccccccccchhhcccC--
Q 008615 294 AVQGKGSLQEYK-EQAISAL----------GK-LRRRPPGDKLSERQIED---TLVSLKSSYTDEKSEGSFLEVFQGP-- 356 (559)
Q Consensus 294 ~~~~~~~~~~~~-~~~~~~~----------~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-- 356 (559)
+.+++ +.+.+. +..+... .. ....+. .. ...... ............++ ...+.-|++
T Consensus 199 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 272 (475)
T TIGR00924 199 GSVPD-PLSGQGKTYGKLLLALLAALALVFFCAWLMHHV-VI--ANILLMTVTLAVIIFFFRLAFKP--RLDAVARNKMY 272 (475)
T ss_pred CCCCC-CcchhhhhhHHHHHHHHHHHHHHHHHHHHHhcc-HH--HHHHHHHHHHHHHHHHHHHHHhc--cCCHHHHhHHH
Confidence 00000 000000 0000000 00 000000 00 000000 00000000000000 011111111
Q ss_pred chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCC---CchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-----cc
Q 008615 357 NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFS---AAADATRVSVVIGVFKLVMTWIAVAKVDDLGR-----RP 427 (559)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-----~~ 427 (559)
.+..+.+...+.+.. +.......+.+.++ .+.. .....+.+.....+..++..++..++-.|..| +.
T Consensus 273 ~~l~l~~~~~~~~~~----~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~ 348 (475)
T TIGR00924 273 AYIVLFLEAVVFWVL----YAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTT 348 (475)
T ss_pred HHHHHHHHHHHHHHH----HHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 111122222222222 22223333333333 2211 11236677777777777776665543333333 33
Q ss_pred hh--hhhHHHHHHHHHHHHHHHHhhc---CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHH
Q 008615 428 LL--IGGVCGIALSLLLLSAYYKILG---GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFG 502 (559)
Q Consensus 428 ~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 502 (559)
.. .+++++.++++..+.+...... ..+.+.++...++.+.......|...++..+..|++.||+.+|+......+
T Consensus 349 ~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 349 PLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 33 5677777777666654211111 123334444555555666667778889999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 503 SNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 503 g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
|..+++.+.....+..++...|...++++++..++.++..|.
T Consensus 429 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (475)
T TIGR00924 429 GSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPW 470 (475)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988877777777777887777777776666555443
No 94
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=1.2e-25 Score=219.47 Aligned_cols=326 Identities=14% Similarity=-0.002 Sum_probs=222.9
Q ss_pred ccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-----chHHH-HHHHHHHHHHHHHHHHh
Q 008615 119 ATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-----GRKRE-LIIAAVLYALGALTTAY 192 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-----Grr~~-~~~~~~~~~i~~~~~~~ 192 (559)
.+++.+|.+.++ +|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++..++.++
T Consensus 6 ~~~~~~~~~~~~-------~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~ 76 (356)
T TIGR00901 6 LVGNTLPYWLRS-------KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSF 76 (356)
T ss_pred hHHhHHHHHHHH-------cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHc
Confidence 344455556555 89999999999766 555555 99999999998 89887 56778888888777777
Q ss_pred c---hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCc--------
Q 008615 193 A---PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGG-------- 261 (559)
Q Consensus 193 ~---~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~-------- 261 (559)
. .+++.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.... +
T Consensus 77 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~-g~~~~~~~~ 155 (356)
T TIGR00901 77 LVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPE-FANTGLITL 155 (356)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhc-ccccccccc
Confidence 6 466677778888899999899999999999999999999999999999999999999999887776 6
Q ss_pred chHHHhhhHHHHHHHHHHhhc-cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcc
Q 008615 262 WRYMYGLSAPLALLMGIGMWS-LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSY 340 (559)
Q Consensus 262 wr~~f~~~~~~~~~~~~~~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (559)
||..|++.++..++..+..++ .+|+.+. + .+++ + +
T Consensus 156 wr~~f~i~ai~~l~~~~~~~~~~~e~~~~--------~--~~~~-~---------------------~------------ 191 (356)
T TIGR00901 156 WGYIFFWTALLILPGLLVTLFLAKEPQED--------A--SVPK-P---------------------L------------ 191 (356)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhccCCCcc--------c--ccch-h---------------------H------------
Confidence 999999999887776655543 4553210 0 0000 0 0
Q ss_pred ccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHH-HHHHHHHHHHHHH
Q 008615 341 TDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIG-VFKLVMTWIAVAK 419 (559)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l 419 (559)
.++.+..++++++++..+..........+. .........+.|.++++.|++. .+.+......+ +..+++.++++++
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~g~~~-~~~g~~~~~~~~~~~~~g~~~~g~l 268 (356)
T TIGR00901 192 -TQAVLKPIREFFQRKNMIQALLLLLLIVLY-KLGDSAATVLTTLFLLDMGFSK-EEIALVAKINGLLGAILGGLIGGII 268 (356)
T ss_pred -HHHHHHHHHHHHHhcCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCCH-HHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 000011244556665522222222221111 1222345667788888877776 66676666555 6778999999999
Q ss_pred hhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc-----CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHH
Q 008615 420 VDDLGRRPLLIGGVCGIALSLLLLSAYYKILG-----GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGIS 494 (559)
Q Consensus 420 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 494 (559)
.||+|+|+.+..+.++.+++..++.+...... ......+....++.++......+...++..|.+|+++||+.+|
T Consensus 269 ~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g 348 (356)
T TIGR00901 269 MQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMA 348 (356)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHH
Confidence 99999999988887777766555443211100 0122222323333333333344556689999999999999999
Q ss_pred HHHHHHH
Q 008615 495 LAVLTNF 501 (559)
Q Consensus 495 ~~~~~~~ 501 (559)
+.+...+
T Consensus 349 ~~~~~~~ 355 (356)
T TIGR00901 349 LLSSLSA 355 (356)
T ss_pred HHHHHHh
Confidence 9887653
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=8.9e-25 Score=215.93 Aligned_cols=370 Identities=16% Similarity=0.026 Sum_probs=247.6
Q ss_pred HHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHH--HHHHHHHHHHHHHHHHH-hhhhhchHHHHHHHHHH
Q 008615 106 PALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLV--VSGSLYGALLGSILVYS-IADFLGRKRELIIAAVL 182 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~l~~~i~~~~~g~-l~dr~Grr~~~~~~~~~ 182 (559)
+...++..|...+...+.+|...++ .|.+.+++|++ .+++.+...+.+++++. ..||+||||..++.+.+
T Consensus 6 ~~~ly~~~g~~~~~~~p~lp~~l~~-------~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~ 78 (390)
T TIGR02718 6 LGLLYLSQGIPIGLAMDALPTLLRE-------DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQC 78 (390)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHH-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHH
Confidence 3344577788888888888888877 89999999997 46678888888888854 78999999987655533
Q ss_pred H-HHHHHHHH---hchh-HhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 008615 183 Y-ALGALTTA---YAPG-LGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIN 257 (559)
Q Consensus 183 ~-~i~~~~~~---~~~~-~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 257 (559)
. ++.....+ ...+ ..+++..-++.++..+...+....+..|..++++++...+....+..+|.++|+.+.+++.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~ 158 (390)
T TIGR02718 79 LVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG 158 (390)
T ss_pred HHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22222222 2222 33445555666777777888888888899988888888999998889999999988888888
Q ss_pred CCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhh
Q 008615 258 AVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLK 337 (559)
Q Consensus 258 ~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (559)
.. |||..|++.+++.++..+..++++|+++ ++ .+ .
T Consensus 159 ~~-gw~~~f~~~a~l~~~~~~~~~~~~~~~~--------~~----~~-----------------~--------------- 193 (390)
T TIGR02718 159 KF-GQRPAFLLVACVPLASLVCVLWLKDRAV--------AS----PE-----------------A--------------- 193 (390)
T ss_pred Hh-CHHHHHHHHHHHHHHHHHHHHHcCCCCc--------Cc----cc-----------------c---------------
Confidence 77 9999999999888876666555544321 00 00 0
Q ss_pred hccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHH-HHHHHHHHHH
Q 008615 338 SSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIG-VFKLVMTWIA 416 (559)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 416 (559)
++++..++++.+|+|..+...+..++...... ....+.+.++++.|++. .+.+......+ ...+++.++.
T Consensus 194 ----~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~l~~~G~s~-~~ig~~~~~~~~~~~~~g~~~~ 264 (390)
T TIGR02718 194 ----PLARRASLFRFFRRPLAWSLLALALLSAMTAV----SGFGLSKLYLVDAGWPL-EWIGRLGMAGGAVTVLLGCGGG 264 (390)
T ss_pred ----chhhHHHHHHHHcCcCHHHHHHHHHHHHHHHH----HHHHHhhHHHHhcCCCH-HHHHHHHhHHHHHHHHHHHHHH
Confidence 00001125567788776665554444333222 34446677788888887 77787777665 4667788999
Q ss_pred HHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHH-HhhcccccccceeecccCCc-cchhhHHH
Q 008615 417 VAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVG-CYQISFGPISWLMVSEIFPL-RTRGRGIS 494 (559)
Q Consensus 417 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~-~~~~~~~g 494 (559)
|++.||+++|+.+..+..+.++..+................+....+..+ +.+... +.......+..++ +.+++.++
T Consensus 265 g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~g~~~~ 343 (390)
T TIGR02718 265 AWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITS-VAIYTAFMRFAGDGDQAGTDVT 343 (390)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcccchHHHHH
Confidence 99999999999888776655333222221110000111111112112211 122222 2223444444554 88999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 495 LAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 495 ~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
+.+....+|..++|.+.|.+.|..|+...|.+.+++.+++.++
T Consensus 344 ~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 344 AVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999988888877776665543
No 96
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=4.5e-25 Score=209.76 Aligned_cols=350 Identities=14% Similarity=0.137 Sum_probs=227.8
Q ss_pred cccchhH-HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQ-LGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~-~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
+|+|..| .|.+.+++..+|+++.++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|++.|... +
T Consensus 56 lglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A 134 (511)
T TIGR00806 56 LNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-A 134 (511)
T ss_pred cCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhh---hHHHHHHHHHHhhccCCchHHHHHh
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGL---SAPLALLMGIGMWSLPPSPRWLLLR 293 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~---~~~~~~~~~~~~~~~~e~p~~~~~~ 293 (559)
...++..|+|+++|+++.++..++..+|.+++++++++ +... |||+.+.+ ......+.+++.+++|..++-+.-+
T Consensus 135 ~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~-gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~ 212 (511)
T TIGR00806 135 YSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTL-GWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFN 212 (511)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhc-CchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhc
Confidence 99999999999999999999999999999999999999 4455 89986544 3333344555567888666544333
Q ss_pred hccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHh
Q 008615 294 AVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQI 373 (559)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (559)
+++.. +.+ ...+.....+.+........+ ......-..-...+++..+++.+....+...+. .
T Consensus 213 ~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a----~ 275 (511)
T TIGR00806 213 RLEDV-----RGA----LPCELDQMVPGPGGKLEDYLG----TCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFN----S 275 (511)
T ss_pred ccccc-----ccc----cccccccCCCCCccccchhhh----hhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHH----h
Confidence 11100 000 000000000000000000000 000000001122345556666554443333232 2
Q ss_pred hChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCc
Q 008615 374 TGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGF 453 (559)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (559)
.+++-+..|...+.++...+....-|.+-++..+.+.+..+..|++-.++.+...+.++.+...-+.+++.. ...++
T Consensus 276 ~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m---~~t~~ 352 (511)
T TIGR00806 276 AGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWM---SQSHD 352 (511)
T ss_pred hHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhh---hcccc
Confidence 334457777777777664432235566667777778888899998866554433333333322222222221 12356
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 454 PLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
.|...+..+++...+.+...... .-++.....+..|...|+++++..+-..+...+.
T Consensus 353 Iw~~Y~~yvlf~~~y~flitia~-~~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 353 IWVLYVTYVLFRGIYQFLVPIAT-FQIASSLSKELCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhcccceEEEEecHHHHHHHHHHheEEEE
Confidence 66666777777777765544333 4455555667779999998887766665555443
No 97
>PTZ00207 hypothetical protein; Provisional
Probab=99.93 E-value=1.2e-23 Score=210.55 Aligned_cols=389 Identities=16% Similarity=0.129 Sum_probs=243.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc------hhHhHHHHHHHHHHhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA------PGLGVLLVGRLLYGLGIG 211 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~------~~~~~l~~~r~l~G~~~g 211 (559)
+|++..+++++.++. ..+++++++.|++.||+|||++++++.+++++++++++++ .+++.+++.|++.|+|.+
T Consensus 57 lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~ 135 (591)
T PTZ00207 57 YNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCM 135 (591)
T ss_pred hCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHH
Confidence 999999999999874 4556788899999999999999999999999999999997 689999999999999999
Q ss_pred hhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHH-HHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hc--cCCch
Q 008615 212 LAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILL-GYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WS--LPPSP 287 (559)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~--~~e~p 287 (559)
...+.....+.+|+| ++||+++|+...+.++|.++ +++..+++ . . +|++.|++.+++.++..++. ++ .|+.+
T Consensus 136 ~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~-~-~-~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~ 211 (591)
T PTZ00207 136 LFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFF-S-D-NTSAYFFFLMSFALVVGILAIVFMRLPPFH 211 (591)
T ss_pred HHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHH-H-H-hHHHHHHHHHHHHHHHHHHHHhheeCCcch
Confidence 999999999999996 67999999999999999976 55555544 3 2 78988988888887765555 33 34444
Q ss_pred HHHHHhhccCCCchhhhH------------------------------------------------HHH---H-HH-H--
Q 008615 288 RWLLLRAVQGKGSLQEYK------------------------------------------------EQA---I-SA-L-- 312 (559)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~------------------------------------------------~~~---~-~~-~-- 312 (559)
+|...++ +.+.+++. ... . .. +
T Consensus 212 ~~~~~~~---~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll 288 (591)
T PTZ00207 212 LTGYQEK---HLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTV 288 (591)
T ss_pred hhccccc---CCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 4432110 00000000 000 0 00 0
Q ss_pred ---------HhhcCCCCCCchhhHHH---H--HHHHHhhh-----c-c-ccccccccchhhcccCchhHHHHHHHHHHHH
Q 008615 313 ---------GKLRRRPPGDKLSERQI---E--DTLVSLKS-----S-Y-TDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQ 371 (559)
Q Consensus 313 ---------~~~~~~~~~~~~~~~~~---~--~~~~~~~~-----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (559)
+.++...++++.+.+.. + ......+. + + ..++...++++.+++..+|.+++.+++....
T Consensus 289 ~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~ 368 (591)
T PTZ00207 289 IFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGA 368 (591)
T ss_pred HHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCc
Confidence 00000000000000000 0 00000000 0 0 0011112566777777777766554444333
Q ss_pred HhhChhhHHHhHHHHHHHc-CCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhhcCCcc--------h-hhhhHHHHHHHH
Q 008615 372 QITGQPSVLYYAGPILQSA-GFSAAAD-ATRVSVVIGVFKLVMTWIAVAKVDDLGRRP--------L-LIGGVCGIALSL 440 (559)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--------~-~~~~~~~~~~~~ 440 (559)
. ..+...+.++.+.+ |.....+ ...+..+.++++.+|++..|.+.....+|+ . +.+..+ +.++.
T Consensus 369 g----l~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~ 443 (591)
T PTZ00207 369 H----FVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITM 443 (591)
T ss_pred h----heeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHH
Confidence 3 34566677788888 6633122 223788889999999999998873222221 1 222222 33443
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHH-HHhhHHHHHhc-
Q 008615 441 LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIV-TFAFSPLKELL- 518 (559)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~-~~i~g~l~~~~- 518 (559)
+++... .....+.+..++.+.+++.. .++....+.|+|. ++-|+-.-+.....-+|+.+. ..++|.++|.-
T Consensus 444 lll~~~-----~p~~~L~~~~~lvg~~~G~~-~~~~~~i~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea 516 (591)
T PTZ00207 444 LTLFLT-----LPKAALPLPYFIAAFANGFM-AATIALVTRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQA 516 (591)
T ss_pred HHHHHH-----CCccHhHHHHHHHHHHhhHh-HHHHHHHHHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433332 11123333444444444443 4455588999999 888988888888788887776 56788888752
Q ss_pred ---------C---chhhHHHHHHHHHHHHHHHHhhccCCC
Q 008615 519 ---------G---AENIFLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 519 ---------g---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
| +..+|++.+++++++.++...+.-++|
T Consensus 517 ~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r 556 (591)
T PTZ00207 517 DKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYR 556 (591)
T ss_pred hhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehH
Confidence 2 567899999999888887665544443
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=6.4e-23 Score=207.21 Aligned_cols=392 Identities=13% Similarity=0.100 Sum_probs=223.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh-hchHHHHHHHHHHHHHHHHHHHhch-hHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF-LGRKRELIIAAVLYALGALTTAYAP-GLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+|++..+.+++.+.+........+++|+++|| +|||++++++.++.+++.+++++++ +.+.++++|+++|+|.|...+
T Consensus 52 lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~ 131 (500)
T PRK09584 52 LGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKA 131 (500)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccC
Confidence 89999999999988887777777899999999 5999999999999999999999874 566777889999999999999
Q ss_pred hhhhhhhccCCccc--chhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHh
Q 008615 216 GAPLYIAETCPSQI--RGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLR 293 (559)
Q Consensus 216 ~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 293 (559)
...+++.|++|+++ |..+++++..+.++|..+||.+++++.+.. |||+.|++.++..++..+..++.. +++..+
T Consensus 132 ~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~-g~~~~F~i~~i~~~i~~i~~~~~~---~~~~~~ 207 (500)
T PRK09584 132 NPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKY-GWSVAFALSVVGMLITVVNFAFCQ---RWVKQY 207 (500)
T ss_pred CHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHhH---HHhccC
Confidence 99999999998643 456889999999999999999999998877 999999998765555443332211 111110
Q ss_pred hccCCCchhhhHHHHHH--------HHHhhcCCCCCCchhhHH-HHHHHHHhhhccccccccccchhhcccCchhHHHHH
Q 008615 294 AVQGKGSLQEYKEQAIS--------ALGKLRRRPPGDKLSERQ-IEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIG 364 (559)
Q Consensus 294 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (559)
+++++.+..+....... ......-.++ +...... .............. ....+.-+++......
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-- 280 (500)
T PRK09584 208 GSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQ-EIARMALGVVALGIVVIFGKEA----FAMKGAARRKMIVAFI-- 280 (500)
T ss_pred CCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHH----hhcCHHHHHHHHHHHH--
Confidence 00000000000000000 0000000000 0000000 00000000000000 0000111111111111
Q ss_pred HHHHHHHHhhChhhHHHhHHHHHHH-cC---CCCchhHHHHHHHHHHHHHHHHHHH----HHHhhhcCCcchhhhhHHHH
Q 008615 365 GGLVLFQQITGQPSVLYYAGPILQS-AG---FSAAADATRVSVVIGVFKLVMTWIA----VAKVDDLGRRPLLIGGVCGI 436 (559)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~d~~~~~~~~~~~~~~~ 436 (559)
.++....++..+.-...+...+..+ .. .+-....+.+.....+..++..++. +++.+|.+..+.+.+++++.
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~ 360 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLC 360 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHH
Confidence 1111111111111111111111111 10 0111235556666666666666655 44455555556777888888
Q ss_pred HHHHHHHHHHHHhhcC---chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHH
Q 008615 437 ALSLLLLSAYYKILGG---FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSP 513 (559)
Q Consensus 437 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~ 513 (559)
+++++.+.......+. .+.+..+...++.+.......|....++.+..|++.||+++|+......+|..++..+.+.
T Consensus 361 ~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~ 440 (500)
T PRK09584 361 SGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANL 440 (500)
T ss_pred HHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888777654321110 1122344445555566666777888889999999999999998877666666666655542
Q ss_pred HH----------HhcCchhhHHHHHHHHHHHHHHHHh
Q 008615 514 LK----------ELLGAENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 514 l~----------~~~g~~~~~~~~~~~~~~~~~~~~~ 540 (559)
.. ...++...|...++++++..++.+.
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 441 MAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred hccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 21 1113556777777666555544443
No 99
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.91 E-value=1.3e-21 Score=189.97 Aligned_cols=352 Identities=19% Similarity=0.186 Sum_probs=246.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-hHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLG-RKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-rr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
.|.|..|+|.+.++..+...++++++|.++||++ +|+++.+..++.++..++....++++.+++..++..+......|.
T Consensus 32 ~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl 111 (400)
T PF03825_consen 32 RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPL 111 (400)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHH
Confidence 7899999999999999999999999999999986 578888888888887777788889999999888889888888999
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHh-hhcccCCC--CcchHHHhhhHHHHHHHHHHhhccCCchHHHHHh
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFV-GSFQINAV--GGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLR 293 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l-~~~l~~~~--~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 293 (559)
..++..+... +++.-.|-.-...++|.+++... ++.+.... .+..+.+++.+..+++.....+.+|+.|.- +
T Consensus 112 ~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~---~ 186 (400)
T PF03825_consen 112 SDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPKTPPK---R 186 (400)
T ss_pred HHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCCCccc---c
Confidence 9998888875 34566677777777777777543 22222211 133456677776666666556677876620 0
Q ss_pred hccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHh
Q 008615 294 AVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQI 373 (559)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (559)
+ .++..++....+..+++|+|++..+++..++......
T Consensus 187 ----~--------------------------------------~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~ 224 (400)
T PF03825_consen 187 ----S--------------------------------------AKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHA 224 (400)
T ss_pred ----c--------------------------------------cCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 0 0000011111233578899887776665555544433
Q ss_pred hChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCc
Q 008615 374 TGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGF 453 (559)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (559)
....|.+.++++.|..+....+....+..+..++.-...+++.+|+|.++++.++.+..++=..++.... ++
T Consensus 225 ----~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~----~~ 296 (400)
T PF03825_consen 225 ----AYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFS----DP 296 (400)
T ss_pred ----HHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc----CC
Confidence 4667778889998843325677777888888999999999999999999999999998888877776531 22
Q ss_pred hhHHHHHHHH----HHHHhhcccccccceeecccCCccchhhHHHHHHHH-HHHHHHHHHHhhHHHHHhcCchhh-----
Q 008615 454 PLVAVSALLL----YVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT-NFGSNAIVTFAFSPLKELLGAENI----- 523 (559)
Q Consensus 454 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~~i~g~l~~~~g~~~~----- 523 (559)
.+.......+ -+..++.. ......++.+..|++.|+++.++.+.. ..+|..++..+.|++.|+.|.+..
T Consensus 297 ~~~~~~~~~l~q~lhG~tf~~~-~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~ 375 (400)
T PF03825_consen 297 WPFIVALQLLGQLLHGLTFGLF-HAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSA 375 (400)
T ss_pred cHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHH
Confidence 2222222211 22223222 233447889999999999999998876 678999999999999999885543
Q ss_pred -HHHHHHHHHHHHHHHHhhccCC
Q 008615 524 -FLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 524 -~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
+.+.+++.++..++.+++.||+
T Consensus 376 ~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 376 VFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHHHHHHHHhhccCC
Confidence 3444444445555555555544
No 100
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=1.4e-21 Score=191.91 Aligned_cols=368 Identities=16% Similarity=0.171 Sum_probs=240.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhh----hhchHHHHHHH-HHHHHHHHHHHHhchhHh---------------
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIAD----FLGRKRELIIA-AVLYALGALTTAYAPGLG--------------- 197 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~~~~~-~~~~~i~~~~~~~~~~~~--------------- 197 (559)
+|++..+.+++..+..+...+.+++.|.++| |+||||.++++ .+...++.++.+++++++
T Consensus 34 lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~ 113 (477)
T TIGR01301 34 LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRA 113 (477)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHH
Confidence 8999999999999999999999999999999 59999998774 666667777777776643
Q ss_pred --HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccc--hhhhhHHHHHHHHHHHHHHHhhhcc--cCCC------------
Q 008615 198 --VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIR--GTLISLKELFIVLGILLGYFVGSFQ--INAV------------ 259 (559)
Q Consensus 198 --~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l--~~~~------------ 259 (559)
.++++-.+..++.....+...+++.|.+|+++| +.+.++.+...++|.++|+.+++.. .+..
T Consensus 114 i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (477)
T TIGR01301 114 IIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSC 193 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccccccccc
Confidence 223333444557788888899999999998865 5799999999999999999999864 1100
Q ss_pred CcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhh
Q 008615 260 GGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKS 338 (559)
Q Consensus 260 ~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (559)
.+.|+.|++.+++.++..++. +..+|.|... .++..+ ++.++.+ +
T Consensus 194 ~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--------------~~~~~~--~~~~~~~--~---------------- 239 (477)
T TIGR01301 194 ANLKSCFLIDIILLAILTYIALSAVKENPLIG--------------SDDFIN--SEAAPPS--K---------------- 239 (477)
T ss_pred chHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--------------cccchh--hhccccc--c----------------
Confidence 156889999888877766655 5577754200 000000 0000000 0
Q ss_pred ccccccccccchhhc----ccC-chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH--cCCCCc-----hh----HHHHH
Q 008615 339 SYTDEKSEGSFLEVF----QGP-NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS--AGFSAA-----AD----ATRVS 402 (559)
Q Consensus 339 ~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~----~~~~~ 402 (559)
......+++++ +-| ..+.+.+..++.++..+ .+..|...+..+ ++.++. ++ ..+..
T Consensus 240 ----~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f----~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l 311 (477)
T TIGR01301 240 ----HGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWF----PFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGL 311 (477)
T ss_pred ----cchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH----HHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHH
Confidence 00000112222 222 23344443344444333 344455555443 221110 01 23445
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCC-cchhhhhHHHHHHHHHHHHHHHHhhcCc-h--------------hHHHHHHHHHHH
Q 008615 403 VVIGVFKLVMTWIAVAKVDDLGR-RPLLIGGVCGIALSLLLLSAYYKILGGF-P--------------LVAVSALLLYVG 466 (559)
Q Consensus 403 ~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~ 466 (559)
....+...+.+++..++.+|+|+ |++..++.++.++++....+.....++. . .......+...|
T Consensus 312 ~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G 391 (477)
T TIGR01301 312 MLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILG 391 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhh
Confidence 55556666777888899999985 6777888888888777776543211100 0 122333333344
Q ss_pred HhhcccccccceeecccCCc--cchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC--chhhHHHHHHHHHHHHHHHHhhc
Q 008615 467 CYQISFGPISWLMVSEIFPL--RTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG--AENIFLLFAAIAFLAVLFIVRTV 542 (559)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 542 (559)
........+.++++++..++ +..|..+|+.|.+..+...+.....|.+.+..| ....+.+.++..++++++.++.+
T Consensus 392 i~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~ 471 (477)
T TIGR01301 392 IPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILL 471 (477)
T ss_pred HHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhC
Confidence 44444556778888888884 556999999999999999999999999777776 44567777788888888888888
Q ss_pred cCCCC
Q 008615 543 PETKG 547 (559)
Q Consensus 543 ~~~~~ 547 (559)
|+++.
T Consensus 472 ~~~~~ 476 (477)
T TIGR01301 472 PRPRV 476 (477)
T ss_pred CCCCC
Confidence 87764
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=1.3e-21 Score=196.55 Aligned_cols=326 Identities=14% Similarity=0.041 Sum_probs=212.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh----hchH-HHHHHHHHHHHHHHHHHHhchh------HhHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF----LGRK-RELIIAAVLYALGALTTAYAPG------LGVLLVGRLLY 206 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~ 206 (559)
+|++..++|.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++.+++...++ ++.+++..++.
T Consensus 40 ~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~ 119 (444)
T PRK09669 40 FGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILL 119 (444)
T ss_pred cCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999998 7874 5566777777777766554432 45666667777
Q ss_pred HhhhhhhhhhhhhhhhccC-CcccchhhhhHHHHHHHHHHHHHHHhhhcccCC------CCcchHHHhhhHHHHHHHHHH
Q 008615 207 GLGIGLAMHGAPLYIAETC-PSQIRGTLISLKELFIVLGILLGYFVGSFQINA------VGGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------~~~wr~~f~~~~~~~~~~~~~ 279 (559)
+.+.........++..|+. ++++|.+..++...+..+|..+++.+...+... ..+|+..+.+.++++++..+.
T Consensus 120 ~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~ 199 (444)
T PRK09669 120 SLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFC 199 (444)
T ss_pred HHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 7777777777778899988 457899888888888888887776654332211 127888888888877766554
Q ss_pred hhc-cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 280 MWS-LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 280 ~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
.++ .+|.++ ++ + .++.+....++.++||+.+
T Consensus 200 ~~~~~~e~~~------------------------------~~-~-----------------~~~~~~~~~~~~~~~n~~~ 231 (444)
T PRK09669 200 CFFMTKERYT------------------------------PE-V-----------------DNSSSVWKDLKLLLGNSQW 231 (444)
T ss_pred HhCCeEEecC------------------------------CC-C-----------------cCCCCHHHHHHHHhCCchH
Confidence 433 333210 00 0 0001112235677888887
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+...+..++....... ......++.+. ........+.+.....+..+++.++.+++.||+|+|+.+..+.++.++
T Consensus 232 ~~l~~~~~~~~~~~~~----~~~~~~y~~~~-~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 232 RIMFIFNVVLLTAVVT----RGGATLYYVNY-VLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVI 306 (444)
T ss_pred HHHHHHHHHHHHHHHH----Hhhhhheeeee-ecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 7665544433332221 11122222222 222223444555566677888889999999999999998877665554
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC-------ccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP-------LRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
..+.+... ..++.+..+ ...+..+.......+..++++.|..+ .+..|...|+.+++..+|.++++.+.
T Consensus 307 ~~~~~~~~---~~~~~~~~~-~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~ 382 (444)
T PRK09669 307 LSALIFFI---PPSNVWLIF-ALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVV 382 (444)
T ss_pred HHHHHHHh---CcchHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 33322221 122232223 33333344444455667788888764 33456778999999999999999999
Q ss_pred HHHHHhcCc
Q 008615 512 SPLKELLGA 520 (559)
Q Consensus 512 g~l~~~~g~ 520 (559)
|.+.+..|+
T Consensus 383 g~ll~~~Gy 391 (444)
T PRK09669 383 GWILAWVDY 391 (444)
T ss_pred HHHHHHcCC
Confidence 999998876
No 102
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.89 E-value=1.5e-21 Score=195.56 Aligned_cols=377 Identities=13% Similarity=0.004 Sum_probs=241.6
Q ss_pred HhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----hHHHHHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLG-----RKRELIIAAVLYA 184 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~~~~~~~~~~ 184 (559)
.+..|.. ......++....++ +|++.++++...++..+...+-.+ +|+++||++ ||+.++++.++.+
T Consensus 35 y~~qGl~-~l~~~~~~~~l~~~------lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~ 106 (468)
T TIGR00788 35 LFVKGIA-GLMRLPLSPMLTDD------LGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGS 106 (468)
T ss_pred HHHhhHH-HHhhhhhhHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHH
Confidence 4555665 44444444444332 899999999999999999999666 999999998 7788888877763
Q ss_pred -HHHHHHHhchhHhHHH-HHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHH---HHHHHHHHHHHHHhhhcccCCC
Q 008615 185 -LGALTTAYAPGLGVLL-VGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLK---ELFIVLGILLGYFVGSFQINAV 259 (559)
Q Consensus 185 -i~~~~~~~~~~~~~l~-~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~---~~~~~~G~~~g~~l~~~l~~~~ 259 (559)
++....+..++...+. +.+++.+++.+...++..+++.|..+ +++....+.. ....++|.++|+.+++.+.+..
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~ 185 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKT 185 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4434444445544444 48899999999999999999999998 5554443333 3344589999999999988877
Q ss_pred CcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhc
Q 008615 260 GGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSS 339 (559)
Q Consensus 260 ~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (559)
+||..|++.+++.++..+..++++|++... +.+ .+.++... .... .....+ .
T Consensus 186 -~~~~~f~~~a~l~ll~~~~~~~~~E~~~~~-------~~~--~~~~~~~~----------~~~~-~~~~~~---~---- 237 (468)
T TIGR00788 186 -LTRILFLITAALLLLQLFVSNLSKERRAFV-------RPR--IGTYLEMN----------MALL-TLGVLA---N---- 237 (468)
T ss_pred -CcchHHHHHHHHHHHHHHHHHhcccccccc-------ccc--ccccchhh----------hhhh-hhhHHH---H----
Confidence 999999999888887766667777753100 000 00000000 0000 000000 0
Q ss_pred cccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 008615 340 YTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAK 419 (559)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 419 (559)
.++.....+..+++|..+..++..++.+. ...+.....++ ...+..|+++ ...|......+++.+++..+.+++
T Consensus 238 --~~~~~~~l~~~l~~~~i~~~l~fifl~~~-~~~~~~~~~f~--~~~~~lG~s~-~~~G~~~~~~~v~~i~g~~~~~~~ 311 (468)
T TIGR00788 238 --VKVQILGLRGAIQLLEIAKPLIFIFLSYA-NLPGASGSVFC--ATTQCLPGGP-SFSGMSKVVGNLGSLCGVGGYDRF 311 (468)
T ss_pred --HHHHHHHHHHHHhcHHHHHHHHHHHHHHh-hcCCCCceeEE--EEcccCCCCc-chhhhHHHHHHHHHHHHHHHHHHH
Confidence 00001123444666655554433333111 11111111111 1113578887 889999999999999999999999
Q ss_pred hhhcCCcchhhhhHHHHHHHHHHHHHHH-Hhh--c--CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHH
Q 008615 420 VDDLGRRPLLIGGVCGIALSLLLLSAYY-KIL--G--GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGIS 494 (559)
Q Consensus 420 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 494 (559)
.+|++.|+++.++.++.+++.+...... ... . ...+.......+...+++....+. ..++.+..|++.+|+..+
T Consensus 312 ~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~egt~~a 390 (468)
T TIGR00788 312 LKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPF-LVLLARLCPSGCESSVFA 390 (468)
T ss_pred HhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccH-HHHHHHhCCCCceehHHH
Confidence 9999999999888888777664432110 000 0 112222233333344444445555 478889999999999999
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhcC-----chhhHHHHHHH
Q 008615 495 LAVLTNFGSNAIVTFAFSPLKELLG-----AENIFLLFAAI 530 (559)
Q Consensus 495 ~~~~~~~~g~~i~~~i~g~l~~~~g-----~~~~~~~~~~~ 530 (559)
+.+.+.++|..+++.+.|.+.+..| +...+.+..+.
T Consensus 391 l~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~ 431 (468)
T TIGR00788 391 LLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGH 431 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHH
Confidence 9999999999999999999999888 65555544333
No 103
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.7e-22 Score=173.49 Aligned_cols=382 Identities=16% Similarity=0.134 Sum_probs=237.5
Q ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhh-hchHHHHHH
Q 008615 100 ILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADF-LGRKRELII 178 (559)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~ 178 (559)
++++++.|+..+-..+.....+ ..+.+...| .+++.++..++.++|.+...+.++++|++.|| +|.|..-++
T Consensus 43 ~m~lv~mc~lgfgsyfcyd~p~-----alq~~fk~d--~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii 115 (459)
T KOG4686|consen 43 FMALVFMCLLGFGSYFCYDAPG-----ALQIDFKLD--SNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII 115 (459)
T ss_pred HHHHHHHHHhcccceeecCCch-----hhhhhhhcc--cccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHH
Confidence 4445555555555544444433 333444444 88899999999999999999999999999995 788877776
Q ss_pred HHHHHHHHHHHHHh---chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 179 AAVLYALGALTTAY---APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 179 ~~~~~~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
-+....+|.+.++. .+.+|.++++||+.|+|.-....+-..++.-||..|+.+.++|+.....-+|..+-..+.+++
T Consensus 116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 66666777777664 689999999999999998888888899999999999999999999999999988777776666
Q ss_pred cCCCC----cc-hHHH---hhhHHHHHH-HHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhh
Q 008615 256 INAVG----GW-RYMY---GLSAPLALL-MGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSE 326 (559)
Q Consensus 256 ~~~~~----~w-r~~f---~~~~~~~~~-~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (559)
.+... |- +... +..+..... ..+...-+ .| .++.+++.+.+-.+.
T Consensus 196 y~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l----g~--------------~D~rAerilh~e~g~-------- 249 (459)
T KOG4686|consen 196 YDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL----GL--------------SDDRAERILHLEEGF-------- 249 (459)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh----hh--------------hhhHHHHHHhhhcCc--------
Confidence 54331 00 0000 000000000 00000000 00 011222222211111
Q ss_pred HHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHH-HHcCCCCchhHHHHHHHH
Q 008615 327 RQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPIL-QSAGFSAAADATRVSVVI 405 (559)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 405 (559)
..+..+.+-..-++ |.+|.+.+.+.+.+...+ -+....|.++ +++|+++ ..++.+....
T Consensus 250 --------------~Ge~pkLtdv~~f~-ppfw~~~iicv~yyva~f----PFi~lg~~fF~~rfGlS~-~~a~~i~s~v 309 (459)
T KOG4686|consen 250 --------------LGEEPKLTDVNTFY-PPFWVLVIICVLYYVAWF----PFITLGPMFFQKRFGLSA-VSAGNILSTV 309 (459)
T ss_pred --------------ccCCcccccccccC-ccHHHHHHHHHHHHHHHH----HHhhhhHHHHHHhhCCCh-hhccchhhhh
Confidence 11111111112222 345555444444333332 2333445555 4578887 6677777777
Q ss_pred HHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC
Q 008615 406 GVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP 485 (559)
Q Consensus 406 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 485 (559)
...+.+.+.+.|.++||.|++-.++.+..+..+..=.+..+.. .+++.....+.+..-..... .|..++.++|
T Consensus 310 y~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~---lsPy~~m~~lGLsysllAcs----lWP~va~~vp 382 (459)
T KOG4686|consen 310 YGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTF---LSPYTSMTFLGLSYSLLACS----LWPCVASLVP 382 (459)
T ss_pred hhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhh---ccHHHHHHHHhhhHHHHHHH----HhhhhhhhCC
Confidence 7778888899999999999998887765555444333333222 33444333333332222222 3455667789
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-chh---hHHHHHHHHHHHHHHHHhh
Q 008615 486 LRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-AEN---IFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 486 ~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-~~~---~~~~~~~~~~~~~~~~~~~ 541 (559)
.++.|++.|+++.+.++|-++.|++.|.+.|..| +.+ .|+..+.+.+.+..+++.+
T Consensus 383 E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 383 EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 8999999999999999999999999999999876 332 2344444444444444443
No 104
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=1.6e-19 Score=178.20 Aligned_cols=383 Identities=13% Similarity=0.080 Sum_probs=216.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-chHHHHHHHHHHHHHHHHHHHhch-hHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-GRKRELIIAAVLYALGALTTAYAP-GLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+|++..+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++++... +...++++..+.++|.|...+
T Consensus 40 lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~ 119 (493)
T PRK15462 40 LKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKS 119 (493)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccc
Confidence 799999999999999999999999999999999 999999999999999988777543 223344455556667777778
Q ss_pred hhhhhhhccCCcc--cchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHh
Q 008615 216 GAPLYIAETCPSQ--IRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLR 293 (559)
Q Consensus 216 ~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~ 293 (559)
...+++.|.+|++ +|..++++...+.++|..++|.+.+++.+.. |||+.|.+.++..++..+..++..+. +...
T Consensus 120 ~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~-Gw~~~F~iaaigm~l~li~~~~~~~~---l~~~ 195 (493)
T PRK15462 120 NVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEY-SWAMGFGLAAVGMIAGLVIFLCGNRH---FTHT 195 (493)
T ss_pred cHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhh-ChHHHHHHHHHHHHHHHHHHHHhhhh---hccC
Confidence 8889999999875 6999999999999999999999999998877 99999998766444433333322111 0000
Q ss_pred -hccCCCchhhhHHHHHH------HHH----hhcCCCCCCchhhHHHH-HHHHH---hhhccccccccccchhhcccCch
Q 008615 294 -AVQGKGSLQEYKEQAIS------ALG----KLRRRPPGDKLSERQIE-DTLVS---LKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 294 -~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
..+++.. +++ +.... ... .+....-.+........ ..... .-.....+.++ .+ |+ +.
T Consensus 196 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~e--r~-r~ 267 (493)
T PRK15462 196 RGVNKKVL-RAT-NFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQ---KQ--RK-EL 267 (493)
T ss_pred CCCCCCCc-hhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH---HH--Hh-hH
Confidence 0000100 000 00000 000 00000000000000000 00000 00000000000 00 11 11
Q ss_pred h---HHHHHHHHHHHHHhhChhhHHHhHHHHHHH--cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC--cc----
Q 008615 359 K---AFIIGGGLVLFQQITGQPSVLYYAGPILQS--AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGR--RP---- 427 (559)
Q Consensus 359 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~---- 427 (559)
. .+.+...+.+..+.-....+..|.....+. .|+. ....++..+..+..++.+++..++-.|..+ |.
T Consensus 268 ~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~--ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~ 345 (493)
T PRK15462 268 GLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYT--VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIW 345 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhccee--eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcH
Confidence 1 111111111221111112222222221111 1222 346677777777777777777766555522 21
Q ss_pred -hhhhhHHHHHHHHHHHHHHHHhhcC---chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHH-HH
Q 008615 428 -LLIGGVCGIALSLLLLSAYYKILGG---FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTN-FG 502 (559)
Q Consensus 428 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~-~~ 502 (559)
-..+++++.+++++.+.+.....+. .+...++...++......+..|+..+.++++.|++.+|..+|+..... .+
T Consensus 346 ~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~ 425 (493)
T PRK15462 346 GKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAI 425 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 2566777788887777543322211 233334555555666777888999999999999999999999986533 45
Q ss_pred HHHHHHHhhHHHHHh------------cCchhhHHHHHHHHHHH
Q 008615 503 SNAIVTFAFSPLKEL------------LGAENIFLLFAAIAFLA 534 (559)
Q Consensus 503 g~~i~~~i~g~l~~~------------~g~~~~~~~~~~~~~~~ 534 (559)
|..++..+.+..... ..+...|...+.+.++.
T Consensus 426 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 426 ANYLAGVIADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHHHHHHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 555555554433210 12334566666655555
No 105
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.86 E-value=5.4e-20 Score=185.85 Aligned_cols=334 Identities=13% Similarity=0.035 Sum_probs=212.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhh----hhch-HHHHHHHHHHHHHHHHHHHhch------hHhHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIAD----FLGR-KRELIIAAVLYALGALTTAYAP------GLGVLLVGRLLY 206 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Gr-r~~~~~~~~~~~i~~~~~~~~~------~~~~l~~~r~l~ 206 (559)
+|++..++|.+..+..+.-++..|++|.++| |+|| |+.++++.+..+++.+++-..+ .+..+++..++.
T Consensus 37 ~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~ 116 (473)
T PRK10429 37 VGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILW 116 (473)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHH
Confidence 7999999999999999999999999999999 6698 5667778888777766664433 134556666777
Q ss_pred HhhhhhhhhhhhhhhhccC-CcccchhhhhHHHHHHHHHHHHHHHhhhccc------CCCCcchHHHhhhHHHHHHHHHH
Q 008615 207 GLGIGLAMHGAPLYIAETC-PSQIRGTLISLKELFIVLGILLGYFVGSFQI------NAVGGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~------~~~~~wr~~f~~~~~~~~~~~~~ 279 (559)
+++.....+...+++.|.. ++++|.+..++...+.++|..+.+.+...+. +...+|+...++.+++.++..+.
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999998 5789999999877777777665554443221 11115777777777766665444
Q ss_pred hh-ccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 280 MW-SLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 280 ~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
.+ ..+|.+.. . + ... ++.++.+-+..++.+++|+.+
T Consensus 197 ~~~~~~e~~~~-------------~--~----------~~~------------------~~~~~~~~~~~~~~~~~n~~~ 233 (473)
T PRK10429 197 TLRNVHEVYSS-------------D--N----------QVS------------------AEGSHLTLKDIVALIYKNDQL 233 (473)
T ss_pred HHcCceecCCc-------------c--c----------ccc------------------ccccCCCHHHHHHHHhcCHHH
Confidence 43 35543210 0 0 000 000000111223445677665
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+.+++..++...... ....+.+++.+...... ...+.+.....++.+++.++.+++.||+|+|+.+..+..+..+
T Consensus 234 ~~ll~~~~~~~~~~~----~~~~~~~y~~~y~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 234 SCLLGMALAYNIASN----IINGFAIYYFTYVIGDA-DLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHH----HHhhheeeEEEEECCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 555444333333221 23333344444333333 4556666667788899999999999999999999887776665
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC-------ccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP-------LRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
+.+.+.........+.+..+ ...+..++......+..+++.+|..+ .+..|...|...++..++..+++.+.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~-i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~ 387 (473)
T PRK10429 309 SCGVLLLMGLAAPHNALLIV-IAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFI 387 (473)
T ss_pred HHHHHHHHhccCchhHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 55444322111112222222 22222333333334455677778754 44456688999999999999999999
Q ss_pred HHHHHhcCc
Q 008615 512 SPLKELLGA 520 (559)
Q Consensus 512 g~l~~~~g~ 520 (559)
|.+.+..|+
T Consensus 388 g~~l~~~Gy 396 (473)
T PRK10429 388 GVVLGLIGY 396 (473)
T ss_pred HHHHHHcCC
Confidence 999988776
No 106
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.86 E-value=1.6e-19 Score=167.96 Aligned_cols=393 Identities=16% Similarity=0.114 Sum_probs=262.4
Q ss_pred HHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHH
Q 008615 99 VILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELII 178 (559)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~ 178 (559)
+|++++..++..+..++.-..+++..-.... +++ +....-|+.-+|++.+....+++-|+.|++|-|...++
T Consensus 43 RW~vLl~~slL~~SN~~qWI~ya~i~n~~~~-------~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~ll 114 (480)
T KOG2563|consen 43 RWVVLLAFSLLNFSNGMQWIQYAPINNYVNS-------FYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLL 114 (480)
T ss_pred HhHHHHHHHHHHhcCcchheeehhHHHHHHH-------Hhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHH
Confidence 3444455555556555544333333222221 167 77788899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhch------hHh--HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHH
Q 008615 179 AAVLYALGALTTAYAP------GLG--VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYF 250 (559)
Q Consensus 179 ~~~~~~i~~~~~~~~~------~~~--~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 250 (559)
+.++.++|..+-..+. .++ ....+..+.+.++-........+..-||++++|..+..+-.++..+|.++|.+
T Consensus 115 gt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~l 194 (480)
T KOG2563|consen 115 GTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFL 194 (480)
T ss_pred HHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhh
Confidence 9999999999877652 345 66778888888888777777788899999999999999999999999999999
Q ss_pred hhhcccCCC-----CcchH--HHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCC
Q 008615 251 VGSFQINAV-----GGWRY--MYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGD 322 (559)
Q Consensus 251 l~~~l~~~~-----~~wr~--~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (559)
+...+..+. ..|.. .|+....++.+.+++. +..++.|+.-. ....+
T Consensus 195 lppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPp------------s~s~~-------------- 248 (480)
T KOG2563|consen 195 LPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPP------------SASQA-------------- 248 (480)
T ss_pred ccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC------------chhHh--------------
Confidence 998887653 14654 3554444444433333 33333221000 00000
Q ss_pred chhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHH
Q 008615 323 KLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVS 402 (559)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (559)
...+..-..+.++.++++++....+++.+...... .....+...+...|+.. ..+|+..
T Consensus 249 ----------------~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~----~l~~~l~~~l~~sgY~~-~~aG~ig 307 (480)
T KOG2563|consen 249 ----------------ALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFN----SLSTLLNLALCPSGYEG-VFAGYIG 307 (480)
T ss_pred ----------------hhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHH----HHHHHhhhccccccCCc-cccchhH
Confidence 00001123356788899888777766665554433 23333333334456665 6899999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCcchh-hhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeec
Q 008615 403 VVIGVFKLVMTWIAVAKVDDLGRRPLL-IGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVS 481 (559)
Q Consensus 403 ~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (559)
....++++++.++.|.+.||.+.-+.. ++......++...+..+.. . ....+.+...+...+.+..+..|+..-+..
T Consensus 308 ~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~-~-~~~~viv~~t~~~~g~~~~~~~Pig~Elgv 385 (480)
T KOG2563|consen 308 ALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL-F-LGDSVIVFTTCGLLGFFGTGYLPIGFELGV 385 (480)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc-c-CCceEehhhhHHHHHHhhcCCCCcceeeee
Confidence 999999999999999999998875543 3333333333222222221 1 222233444455566667778888888888
Q ss_pred ccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC----chhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 482 EIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG----AENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 482 ~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
|..-|..-++..|+.+..+++.+.+-..+.+...+..+ +...-+.....+++..++..++.++.+++
T Consensus 386 E~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~ 456 (480)
T KOG2563|consen 386 ETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRL 456 (480)
T ss_pred eeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhH
Confidence 88666778899999999999999999999999988777 44444455555555555555555544443
No 107
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.86 E-value=1.4e-19 Score=180.77 Aligned_cols=329 Identities=19% Similarity=0.217 Sum_probs=240.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhh----hhchHHH-HHHHHHHHHHHHHHHHhc-h-------hHhHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIAD----FLGRKRE-LIIAAVLYALGALTTAYA-P-------GLGVLLVGRL 204 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~-~~~~~~~~~i~~~~~~~~-~-------~~~~l~~~r~ 204 (559)
+|+++..+|.+..+..+..++..|+.|.++| |+||||. +++|.+..+++.+++... + .+..+.+..+
T Consensus 32 ~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~ 111 (428)
T PF13347_consen 32 LGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYI 111 (428)
T ss_pred cCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHH
Confidence 7999999999999999999999999999999 8997765 457888888888877765 4 2334567777
Q ss_pred HHHhhhhhhhhhhhhhhhccCC-cccchhhhhHHHHHHHHHHHHHHHhhhcccCCCC------cchHHHhhhHHHHHHHH
Q 008615 205 LYGLGIGLAMHGAPLYIAETCP-SQIRGTLISLKELFIVLGILLGYFVGSFQINAVG------GWRYMYGLSAPLALLMG 277 (559)
Q Consensus 205 l~G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~------~wr~~f~~~~~~~~~~~ 277 (559)
+..++.........++..|..+ +++|.+..++-..+..+|.++...+.+.+.+..+ +|++..++.+++.++..
T Consensus 112 l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~ 191 (428)
T PF13347_consen 112 LFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFF 191 (428)
T ss_pred HHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHh
Confidence 7799999999999999999997 4789999999999999998777776666554322 69999999888888766
Q ss_pred HHhh-ccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC
Q 008615 278 IGMW-SLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP 356 (559)
Q Consensus 278 ~~~~-~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (559)
++.. ..+|.++ +.+++.++.+-+..++.+++||
T Consensus 192 ~i~~~~~ke~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~nr 225 (428)
T PF13347_consen 192 LITFFFVKERSV----------------------------------------------EVTEQEKKISLRDSLRSLFRNR 225 (428)
T ss_pred hhhhheeeeccc----------------------------------------------cccccccccccccchhhhcccc
Confidence 6654 4555111 0000011222344577888888
Q ss_pred chhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHH
Q 008615 357 NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGI 436 (559)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 436 (559)
.++.......+..+.... .....+++.+..-..+ ...+.......+..+++.++.++++||+|+|+.+..+.++.
T Consensus 226 ~~~~l~~~~~~~~~~~~~----~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~ 300 (428)
T PF13347_consen 226 PFRILLLAFFLQWLAFAL----MNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLA 300 (428)
T ss_pred hHHHHHHHHHHHHhhhhh----hhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHH
Confidence 877776665555444433 3334444444433333 46677777888999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC-------ccchhhHHHHHHHHHHHHHHHHHH
Q 008615 437 ALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP-------LRTRGRGISLAVLTNFGSNAIVTF 509 (559)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~ 509 (559)
+++.+++.+... .+.+..+ ...+..+..........+++..|+.+ ++..|...|+.++...++..+++.
T Consensus 301 ~~~~~~~~~~~~---~~~~~~~-i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~ 376 (428)
T PF13347_consen 301 ALGFLLLFFLGP---GSPWLVL-ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGA 376 (428)
T ss_pred HHHHHHHHHHHh---hhHHHHH-HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHH
Confidence 888877765431 2333333 34444444444555677788888876 344689999999999999999999
Q ss_pred hhHHHHHhcCch
Q 008615 510 AFSPLKELLGAE 521 (559)
Q Consensus 510 i~g~l~~~~g~~ 521 (559)
+.+.+.+..|+.
T Consensus 377 i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 377 IVGLLLALVGYD 388 (428)
T ss_pred HHHHHHHHhCcC
Confidence 999998877654
No 108
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.86 E-value=2.2e-18 Score=170.71 Aligned_cols=361 Identities=17% Similarity=0.165 Sum_probs=242.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHH-HHHHHHHHHHHHHhc-h-hHhHHHHHHHHHHhhhhhhhhhhh
Q 008615 142 AVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELII-AAVLYALGALTTAYA-P-GLGVLLVGRLLYGLGIGLAMHGAP 218 (559)
Q Consensus 142 ~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~-~~~~~~i~~~~~~~~-~-~~~~l~~~r~l~G~~~g~~~~~~~ 218 (559)
.+..++..++..+..++..|+.|.++|+-|+||.++. ..++..++++++.+. + +++...+.-++.-++.+.......
T Consensus 69 ~s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyn 148 (477)
T PF11700_consen 69 SSLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYN 148 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557889999999999999999999999987766554 445555566666663 3 455555556666678888888899
Q ss_pred hhhhccCCcccc--------------------------hhhhhHHHHHHHHHHHHHHHhhhcccCCCC-------cchHH
Q 008615 219 LYIAETCPSQIR--------------------------GTLISLKELFIVLGILLGYFVGSFQINAVG-------GWRYM 265 (559)
Q Consensus 219 ~~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-------~wr~~ 265 (559)
+++.|..+++++ ++..+.-.+...+|.++.-++.-.+..... +-|..
T Consensus 149 a~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 149 AYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 999999999888 899998888888888887776555432221 34888
Q ss_pred HhhhHHHHHHHHH-HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhcccccc
Q 008615 266 YGLSAPLALLMGI-GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEK 344 (559)
Q Consensus 266 f~~~~~~~~~~~~-~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (559)
+.+.++.-++..+ ..+++||.|+. +.. +......+...++
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~--------~~~-~~~~~~~~~g~~~------------------------------ 269 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGP--------RPL-PSGSSYLRFGFKR------------------------------ 269 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCC--------CCC-CcchhHHHHHHHH------------------------------
Confidence 8888877666444 44667776530 000 0000000011111
Q ss_pred ccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 345 SEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
-...++++.|.|...++++. ++.+.-+.+.+......+.. .++++. .+...+.....+.+++|.++.|++.||+
T Consensus 270 l~~t~k~~~~~~~~~~fLia----~~l~~dg~~ti~~~~~i~a~~~lg~s~-~~l~~~~l~~~i~a~~Ga~~~g~l~~r~ 344 (477)
T PF11700_consen 270 LWRTFKEIRKLRQLFLFLIA----YFLYSDGVNTIISFAGIYATEVLGMST-TQLIVFGLVVQIVAIIGALLFGWLQDRF 344 (477)
T ss_pred HHHHHHHHHhChHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHhcCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 01123344444444444433 33333444556666666665 578887 7788888889999999999999999999
Q ss_pred CCc--chhhhhHHHHHHHHHHHHH--HHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHH
Q 008615 424 GRR--PLLIGGVCGIALSLLLLSA--YYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT 499 (559)
Q Consensus 424 ~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 499 (559)
|.| +++..+.++..+..+...+ ............+..+.+..+.+.+...+...++.+++.|+++.+..+|+....
T Consensus 345 g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~ 424 (477)
T PF11700_consen 345 GPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAIT 424 (477)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHH
Confidence 999 7766665554332222111 110001122233444555666666677788889999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHhcC-chhhHHHHHHHHHHHHHHHHhhccCCCC
Q 008615 500 NFGSNAIVTFAFSPLKELLG-AENIFLLFAAIAFLAVLFIVRTVPETKG 547 (559)
Q Consensus 500 ~~~g~~i~~~i~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (559)
+...+.+||.++|.+.+..| .+..+....++.+++.++. ..++..|+
T Consensus 425 gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll-~~v~~~~g 472 (477)
T PF11700_consen 425 GKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILL-FFVDVEKG 472 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHH-hhccchhh
Confidence 99999999999999999998 6777777777777777655 44444443
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.86 E-value=5.1e-21 Score=181.76 Aligned_cols=354 Identities=16% Similarity=0.150 Sum_probs=224.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH--HHHH-HHHHhch----hHh-HHHHHHHHHHhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY--ALGA-LTTAYAP----GLG-VLLVGRLLYGLG 209 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~--~i~~-~~~~~~~----~~~-~l~~~r~l~G~~ 209 (559)
.|++.+++|.+.++..+...+.+++.|.++||+|.||-++....+. ..+. +...+.+ |++ ..+++-+..|++
T Consensus 38 ~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~ 117 (412)
T PF01306_consen 38 AGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLV 117 (412)
T ss_dssp H---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999999999999999999999999666544332222 2222 2222222 222 223333344444
Q ss_pred hhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhcc-CCchH
Q 008615 210 IGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSL-PPSPR 288 (559)
Q Consensus 210 ~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~e~p~ 288 (559)
.....|+.-+++.++. ++.+.-.|-.-.+.++|.+++..++|.+.+. +-+..||+....+++..++.++. |+.++
T Consensus 118 f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L~~i--~p~~~fwi~s~~~~il~lll~~~~~~~~~ 193 (412)
T PF01306_consen 118 FNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGILFNI--NPNIIFWIASAAAIILLLLLLLLKPDVPP 193 (412)
T ss_dssp TTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHSS---SSS
T ss_pred HcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhheeeee--CccHHHHHHHHHHHHHHHHHHHcCCcCch
Confidence 4455555555555543 4456677888889999999999999998764 56778888777666655554443 33221
Q ss_pred HHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHH
Q 008615 289 WLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLV 368 (559)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (559)
....+ +.. ..++++.+.+...+++|+|++|.+++.....
T Consensus 194 ~~~~~--------------------------~~~---------------~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~ 232 (412)
T PF01306_consen 194 QAEVA--------------------------DAL---------------GAKKDKVSLKDVLSLFKMRNFWFFVLFVIGV 232 (412)
T ss_dssp SS-SS--------------------------TTS---------------SS------HHHHHHHTTSHHHHHHHHHHHHH
T ss_pred hhhhh--------------------------ccc---------------ccCCCCCcHHHHHHHhcchhHHHHHHHHHHH
Confidence 00000 000 0000011112345788888888766544443
Q ss_pred HHHHhhChhhHHHhHHHHHHH----cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHH
Q 008615 369 LFQQITGQPSVLYYAGPILQS----AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLS 444 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 444 (559)
...+.. +-...+.|+.. .+.+. ...|++.+...+..++.-.+.+++.+|+|.|+.++++..++.+=..+.+
T Consensus 233 ~~~Y~v----fdqqf~~y~~~~f~~~~~g~-~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~ 307 (412)
T PF01306_consen 233 AAIYDV----FDQQFPIYFASFFQSAGQGN-QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSG 307 (412)
T ss_dssp HHHHHH----HHHHHHHHHHHTSSSHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHHHHHHHHHHhcccccCh-hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHh
Confidence 333322 22223334433 22333 4678888888889999999999999999999999999988888877776
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHH-HHHHHHHHHHHHHhhHHHHHhcCchhh
Q 008615 445 AYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLA-VLTNFGSNAIVTFAFSPLKELLGAENI 523 (559)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~i~~~i~g~l~~~~g~~~~ 523 (559)
+. ++++.....-.+-..-+.....+ ..-|+.+.+|++..++...+. +...+++.++.+.+.|.++|+.|++.+
T Consensus 308 ~~-----~~~~~i~~~klLH~~e~~l~lva-~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~t 381 (412)
T PF01306_consen 308 FA-----TNPWVISLIKLLHALEFPLLLVA-AFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHT 381 (412)
T ss_dssp T-------SHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hh-----cchHHHHHHHHHHHHHHHHHHHH-HHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHH
Confidence 42 34444443333333333333333 347889999999999999886 567899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCC
Q 008615 524 FLLFAAIAFLAVLFIVRTVPETKG 547 (559)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~ 547 (559)
|++.+.+.++..++..+.+++.++
T Consensus 382 ylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 382 YLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHHHHheeeecCCCc
Confidence 999999888888888877766554
No 110
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.84 E-value=3.2e-19 Score=168.76 Aligned_cols=277 Identities=17% Similarity=0.116 Sum_probs=191.0
Q ss_pred HhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC-----------
Q 008615 191 AYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV----------- 259 (559)
Q Consensus 191 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~----------- 259 (559)
+...+|+.++++-++.|.|.+...+....++.+..+++++.+.+++.++++++|.+++|.+++.+....
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 345789999999999999999999999999999999999999999999999999999999999877321
Q ss_pred ----CcchHHHhhhHHHHHHHHHHhhc--cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHH
Q 008615 260 ----GGWRYMYGLSAPLALLMGIGMWS--LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTL 333 (559)
Q Consensus 260 ----~~wr~~f~~~~~~~~~~~~~~~~--~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (559)
.+|+++|++.+.+.++..+.+.+ +||... +++ ++
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-------------~~~-~~-------------------------- 124 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-------------ADV-AR-------------------------- 124 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-------------ccc-cc--------------------------
Confidence 27999999777666655554433 344211 000 00
Q ss_pred HHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH---cCCCCchhHHHHHHHHHHHHH
Q 008615 334 VSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS---AGFSAAADATRVSVVIGVFKL 410 (559)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 410 (559)
..+++....++.+++|.++... +..+.+......+..|.+.|+.+ .+.++ .+++........+.+
T Consensus 125 -------~~~~~~~~~~~~~~~~~~~l~~----~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~-~~a~~~~s~~~~~~~ 192 (310)
T TIGR01272 125 -------VSSGDTTQKTSAFQFTHLVLGA----LGIFVYVGAEVSAGSFLVNFLSDPHALGLPE-DQAAHFTAYTWGGAM 192 (310)
T ss_pred -------cccccccchhhHHhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccCCCCH-HHHHHHHHHHHHHHH
Confidence 0000000112344444433322 33333443445678888999875 36665 788899999999999
Q ss_pred HHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchh
Q 008615 411 VMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRG 490 (559)
Q Consensus 411 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 490 (559)
+|+++.+++.||+++++.+..+..+..++.+++... . .......+. ..+++.....|...+...+..|+ ..+
T Consensus 193 iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~-----~-~~~~~~~~~-l~g~~~s~i~P~~~s~a~~~~~~-~~~ 264 (310)
T TIGR01272 193 VGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALT-----H-GYVAMWFVL-ALGLFNSIMFPTIFSLALNALGR-HTS 264 (310)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc-----C-CHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhh-hhh
Confidence 999999999999999998887776666655433321 1 122222222 33344444455655677777674 456
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHH
Q 008615 491 RGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFA 528 (559)
Q Consensus 491 ~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~ 528 (559)
++.++. ....+|+++.|.+.|.+.|..|.+..+++..
T Consensus 265 ~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~ 301 (310)
T TIGR01272 265 QGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPV 301 (310)
T ss_pred hhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHH
Confidence 677775 5678999999999999999999877776433
No 111
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=1.4e-18 Score=174.87 Aligned_cols=325 Identities=14% Similarity=0.020 Sum_probs=196.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh----chHHHH-HHHHHHHHHHHHHH-Hh----ch--hHhHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFL----GRKREL-IIAAVLYALGALTT-AY----AP--GLGVLLVGRLL 205 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~----Grr~~~-~~~~~~~~i~~~~~-~~----~~--~~~~l~~~r~l 205 (559)
+|++..++|.+.+...+..++..+++|+++||. ||||.+ +++.+...+..++. .. +. ..+.+++..++
T Consensus 39 ~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (448)
T PRK09848 39 AGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMG 118 (448)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHH
Confidence 799999999999999999999999999999996 777654 55655555444443 22 11 22334445567
Q ss_pred HHhhhhhhhhhhhhhhhccCCc-ccchhhhhHHHHH-----HHHHHHHHHHhhhcccCCC-CcchHHHhhhHHHHHHHHH
Q 008615 206 YGLGIGLAMHGAPLYIAETCPS-QIRGTLISLKELF-----IVLGILLGYFVGSFQINAV-GGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 206 ~G~~~g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~-----~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~ 278 (559)
.+++.+...+...++..+...+ ++|.+..++-..+ ..++..++|.+++...... .+|.....+.++++++..+
T Consensus 119 ~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 198 (448)
T PRK09848 119 LGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYF 198 (448)
T ss_pred HHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHH
Confidence 7888888887777777766644 6788776665543 3355566666665432111 0222222222333333222
Q ss_pred Hh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCc
Q 008615 279 GM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPN 357 (559)
Q Consensus 279 ~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (559)
+. ...+|++. .+ .++...+..++.++|++.
T Consensus 199 ~~~~~~~e~~~----------------------------~~---------------------~~~~~~~~~~~~l~~n~~ 229 (448)
T PRK09848 199 ICFKSTRENVV----------------------------RI---------------------VAQPSLKISLQTLKRNRP 229 (448)
T ss_pred HHHcCcEeccC----------------------------CC---------------------ccCCCHHHHHHHHhCCch
Confidence 22 23344321 00 000011123566888888
Q ss_pred hhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHH
Q 008615 358 LKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGI 436 (559)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 436 (559)
++...+..++.+.... ....+.++++++ .+.+. ...++......++.+++.++.+++.||+++|+.+.++.++.
T Consensus 230 f~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~ 304 (448)
T PRK09848 230 LFMLCIGALCVLISTF----AVSASSLFYVRYVLNDTG-LFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLG 304 (448)
T ss_pred HHHHHHHHHHHHHHHH----HHhhhheeeEeeecCChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 7766655554444332 233345555554 33332 44444444445677889999999999999999999988877
Q ss_pred HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCcc-------chhhHHHHHHHHHHHHHHHHHH
Q 008615 437 ALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLR-------TRGRGISLAVLTNFGSNAIVTF 509 (559)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------~~~~~~g~~~~~~~~g~~i~~~ 509 (559)
.++.+.+.+. ...+.+..+. ..+..+.......+...++..|..|.+ ..|...|+.++...+|..+++.
T Consensus 305 ~i~~~~~~~~---~~~~~~~~~~-~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~ 380 (448)
T PRK09848 305 TCGYLLFFWV---SVWSLPVALV-ALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGS 380 (448)
T ss_pred HHHHHHHHHc---CchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHH
Confidence 7776655431 1122222222 222233333333445556777776543 4699999999999999999999
Q ss_pred hhHHHHHhcCc
Q 008615 510 AFSPLKELLGA 520 (559)
Q Consensus 510 i~g~l~~~~g~ 520 (559)
+.+.+.+..|+
T Consensus 381 i~g~~l~~~G~ 391 (448)
T PRK09848 381 IPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHcCC
Confidence 99999887775
No 112
>PRK11462 putative transporter; Provisional
Probab=99.84 E-value=2.4e-18 Score=172.50 Aligned_cols=325 Identities=13% Similarity=0.048 Sum_probs=204.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh----hchHHH-HHHHHHHHHHHHHHHHhchh------HhHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF----LGRKRE-LIIAAVLYALGALTTAYAPG------LGVLLVGRLLY 206 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr~~-~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~ 206 (559)
+|+++..+|.+..+.-+--++..|+.|.++|| +||||. ++++.+..+++.+++-..++ +..+++.-++.
T Consensus 40 ~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~ 119 (460)
T PRK11462 40 FGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLL 119 (460)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHH
Confidence 89999999999999999999999999999995 798654 55677777777766654442 34556666777
Q ss_pred HhhhhhhhhhhhhhhhccCC-cccchhhhhHHHHHHHHHHHHHHHhhhcccCCC------CcchHHHhhhHHHHHHHHHH
Q 008615 207 GLGIGLAMHGAPLYIAETCP-SQIRGTLISLKELFIVLGILLGYFVGSFQINAV------GGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~------~~wr~~f~~~~~~~~~~~~~ 279 (559)
.++.......-.++..|..+ +++|.+..++...+..+|..+++.+...+.... .+|+....+.+++.+++.++
T Consensus 120 ~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i 199 (460)
T PRK11462 120 TLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAF 199 (460)
T ss_pred HHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999887 688999999999999999888777654433221 16787777777766665544
Q ss_pred hhc-cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 280 MWS-LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 280 ~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
.++ .+|.++ . +. ++...+..++..++|+.+
T Consensus 200 ~~~~~kE~~~----------------------------~--~~-------------------~~~~~~~~l~~~~~Nk~~ 230 (460)
T PRK11462 200 CFFTTKERVE----------------------------A--PP-------------------TTTSMREDLRDIWQNDQW 230 (460)
T ss_pred HHhcceeccC----------------------------C--Cc-------------------cCCCHHHHHHHHhCChHH
Confidence 433 333211 0 00 000011234566777766
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+.+.....+.............+|..++ .... ...+.+.....++.+++.+++++++||+++|+....+..+..+
T Consensus 231 ~~l~~~~~~~~~~~~~~~~~~~y~~~y~----~g~~-~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~ 305 (460)
T PRK11462 231 RIVGLLTIFNILAVCVRGGAMMYYVTWI----LGTP-EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAV 305 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhhhhhhh----cCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 6554433333332222111222222222 2222 3445566777788899999999999999999887655444333
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC-------ccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP-------LRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
..+++.+. ........+...++ .++......++.+++..|..+ .+..|...+...+...+|.++++.+.
T Consensus 306 ~~~~~~~~---~~~~~~~~~~~~~l-~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 306 ISLAMFFV---PMQASITMFVFIFV-IGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred HHHHHHHh---chhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 33322211 11222222222222 233333334444566666654 33345556777788999999999999
Q ss_pred HHHHHhcCc
Q 008615 512 SPLKELLGA 520 (559)
Q Consensus 512 g~l~~~~g~ 520 (559)
|.+.+..|+
T Consensus 382 g~iL~~~Gy 390 (460)
T PRK11462 382 GWMLAYGGY 390 (460)
T ss_pred HHHHHHcCC
Confidence 999987665
No 113
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.82 E-value=8.7e-18 Score=161.27 Aligned_cols=330 Identities=20% Similarity=0.145 Sum_probs=230.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh----hchH-HHHHHHHHHHHHHHHHHHhchh------HhHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF----LGRK-RELIIAAVLYALGALTTAYAPG------LGVLLVGRLLY 206 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr----~Grr-~~~~~~~~~~~i~~~~~~~~~~------~~~l~~~r~l~ 206 (559)
+|+++..+|.+..+--+--++..|+.|.+.|| +||+ +.++.+.+-.++.+.++-.+++ ....++.-++.
T Consensus 43 ~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~ 122 (467)
T COG2211 43 FGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLL 122 (467)
T ss_pred cCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHH
Confidence 89999999999999999999999999999994 8875 5567788888888888877763 44566678889
Q ss_pred HhhhhhhhhhhhhhhhccCC-cccchhhhhHHHHHHHHHHHHHHHhhhcccC----C--CCcchHHHhhhHHHHHHHHHH
Q 008615 207 GLGIGLAMHGAPLYIAETCP-SQIRGTLISLKELFIVLGILLGYFVGSFQIN----A--VGGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----~--~~~wr~~f~~~~~~~~~~~~~ 279 (559)
+++.......-.++..++.+ ++||.+..++-+.+.++|..+...+...+.. . ..||+..-++.++++.+..+.
T Consensus 123 ~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~ 202 (467)
T COG2211 123 GLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLF 202 (467)
T ss_pred HHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888885 4889999999999999997665555444332 1 227888888877777776665
Q ss_pred hhc-cCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 280 MWS-LPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 280 ~~~-~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
.++ ..|.+. +..+.+ ...+.+.+..+..+++|+.+
T Consensus 203 ~~~~v~ER~~----------------------------~~~~~~----------------~~~~~~~~~~~~~~~~Nrp~ 238 (467)
T COG2211 203 CFFNVKERVV----------------------------ETQPTK----------------TGVKLKLKDSFLLIFKNRPL 238 (467)
T ss_pred HHHHhhcccC----------------------------ccccCc----------------ccccccHHHHHHHHHccchH
Confidence 544 433221 000000 00011112234467788877
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIA 437 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 437 (559)
....+...+.+.... .......+|.+. .+..+ ............+.+++.++..++.+|+|+|+++.++.++.+
T Consensus 239 ~~~l~~~l~~~~~~~----i~~s~~~yy~~y~lg~~~-l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 239 LLLLLMNLLLFIAFN----IRGSIMVYYVTYVLGDPE-LFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred HHHHHHHHHHHHHHH----HHhhhhheeEEEEcCChH-HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 766654333333322 222222333322 23333 556667777777778889999999999999999999998888
Q ss_pred HHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCC-------ccchhhHHHHHHHHHHHHHHHHHHh
Q 008615 438 LSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFP-------LRTRGRGISLAVLTNFGSNAIVTFA 510 (559)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~~~g~~i~~~i 510 (559)
++.+++.+.. .+....+++..+..+.......++.+++.+|... .+..|...|...+++.+|.+++..+
T Consensus 314 i~~~~~~f~~----~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 314 VGYLLLYFTP----AGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHHHHHhhc----CcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 8888777542 2333333344344444445566788888888754 3456888899999999999999999
Q ss_pred hHHHHHhcCc
Q 008615 511 FSPLKELLGA 520 (559)
Q Consensus 511 ~g~l~~~~g~ 520 (559)
.|++.+..|+
T Consensus 390 ~g~~L~~~Gy 399 (467)
T COG2211 390 PGWILGAIGY 399 (467)
T ss_pred HHHHHHHcCC
Confidence 9999988774
No 114
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.79 E-value=2.8e-17 Score=156.12 Aligned_cols=401 Identities=15% Similarity=0.129 Sum_probs=253.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-chHHHHHHHHHHHHHHHHHHHhch--hHhHHHHHHHHHHhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-GRKRELIIAAVLYALGALTTAYAP--GLGVLLVGRLLYGLGIGLAM 214 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~ 214 (559)
+|++++++.-+.+.|..-.-+..+++|+++||+ |+|+.+++|.++..+|.++.+.+. +...++++-++.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 679999999999999988889999999999996 999999999999999999999984 78899999999999999999
Q ss_pred hhhhhhhhccCCcc--cchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHH
Q 008615 215 HGAPLYIAETCPSQ--IRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLL 292 (559)
Q Consensus 215 ~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~ 292 (559)
+....++.|.+|++ +|-..++++.++.++|.+++|++.+++.+.+ ||...|.+.++-..+.++..++.+..-.+...
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~-g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~ 214 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINY-GWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGG 214 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHHHHHccchhcCCCC
Confidence 99999999999864 3778899999999999999999999999988 99999999888877776666554321110000
Q ss_pred hhccCCCchhhhHH-H----HHHHHHhh-cCCCCCCchhhH-HHHHHHHH---hhhccccccccccchhhcccCchhHHH
Q 008615 293 RAVQGKGSLQEYKE-Q----AISALGKL-RRRPPGDKLSER-QIEDTLVS---LKSSYTDEKSEGSFLEVFQGPNLKAFI 362 (559)
Q Consensus 293 ~~~~~~~~~~~~~~-~----~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (559)
+ .+++....+... . ........ -.....+..... ........ ..+....++....-++++ ...++.
T Consensus 215 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~---~~~~Lf 290 (498)
T COG3104 215 V-PDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLL---AAIPLF 290 (498)
T ss_pred C-CCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHH---HHHHHH
Confidence 0 000000000000 0 00001110 000000000000 00000000 000000000000000010 112233
Q ss_pred HHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--c-----hhhhhHHH
Q 008615 363 IGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR--P-----LLIGGVCG 435 (559)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~-----~~~~~~~~ 435 (559)
+...+.+..+--..+.+..|.....++..+.-.....+..++..+.-++.+++..++..+.+++ . -+-+++.+
T Consensus 291 l~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l 370 (498)
T COG3104 291 LFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLIL 370 (498)
T ss_pred HHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHH
Confidence 3333444444444445555554444333121224567777888888888887777777774333 1 23456666
Q ss_pred HHHHHHHHHHHHHhhc----CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 436 IALSLLLLSAYYKILG----GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 436 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
++.+++++........ ..+...++...++..+.-.+..|+..+++..+.|+...+..+++.......+..++..+.
T Consensus 371 ~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va 450 (498)
T COG3104 371 AGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVA 450 (498)
T ss_pred HHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceec
Confidence 6666666665422122 234445555566666777778888889999999999999999999888888888888777
Q ss_pred HH------HHHhcCchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 512 SP------LKELLGAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 512 g~------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
+. ..+.......|..++...++...+.+...|
T Consensus 451 ~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~ 488 (498)
T COG3104 451 GLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSP 488 (498)
T ss_pred ccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhH
Confidence 63 344445566777777777666665554443
No 115
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=3e-16 Score=145.76 Aligned_cols=352 Identities=17% Similarity=0.188 Sum_probs=238.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHH-HHHHHHHHHHHHHHhchh--H-hHHHHHHHHHHhhhhhhhhh
Q 008615 141 SAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELI-IAAVLYALGALTTAYAPG--L-GVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 141 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~-~~~~~~~i~~~~~~~~~~--~-~~l~~~r~l~G~~~g~~~~~ 216 (559)
+.+..+...++..+..++..|+.|.++|+.|+||..+ +...+..+..++..++++ + +..++.-.+..++.......
T Consensus 56 ~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vf 135 (438)
T COG2270 56 STAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVF 135 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhhee
Confidence 4567889999999999999999999999999766554 455555556666666554 4 44555678888998889999
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhh--hccc----------------CCCCcchHHHhhhHHHHHHHHH
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVG--SFQI----------------NAVGGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l~----------------~~~~~wr~~f~~~~~~~~~~~~ 278 (559)
-.+++.+..++++-++..++-.....+|..+.-++. .... +.. .-|..+.+.++..++..+
T Consensus 136 yds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~-~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 136 YDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGE-DVRITGLLAALWWLLFAL 214 (438)
T ss_pred hhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccc-cchhHHHHHHHHHHHHHh
Confidence 999999999998877777766666666655544332 1111 111 467777777777766554
Q ss_pred Hh-hccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCc
Q 008615 279 GM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPN 357 (559)
Q Consensus 279 ~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (559)
-. +..++.++- . ........+. -++-+.+++++.++++
T Consensus 215 Pm~~~v~~~~~~-------------~-------------------~~~~~~l~~g---------~k~L~~t~k~i~~~~~ 253 (438)
T COG2270 215 PMILNVHDAEKI-------------S-------------------SPPPTALRNG---------FKELKSTFKEIRGRKN 253 (438)
T ss_pred HHHhcccccccc-------------c-------------------ccchHHHHHH---------HHHHHHHHHHHhcccc
Confidence 43 445544320 0 0000000000 0111224556666666
Q ss_pred hhHHHHHHHHHHHHHhhChhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHH
Q 008615 358 LKAFIIGGGLVLFQQITGQPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGI 436 (559)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 436 (559)
...+++..++ +.-+.+....+...+-. ++|.+. .+..++.....+.+++|+++.|++.||+|.|+++.+++++.
T Consensus 254 i~~FLiA~~~----~~DGv~til~~~~~fg~~~~gls~-~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~ 328 (438)
T COG2270 254 LVLFLIARFF----YIDGVNTILAMGGVFGAADLGLSS-TELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVIL 328 (438)
T ss_pred hHHHHHHHHH----HHhhHHHHHHHHHHHHHHHcCccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHH
Confidence 5655544333 33344556666666666 678887 78889999999999999999999999999999999888877
Q ss_pred HHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008615 437 ALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE 516 (559)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 516 (559)
.+.++..... . ....+....++.+.+.++......++..+.+|+++.++.+|+++..+...+.++|...+.+.+
T Consensus 329 ~~~~~~~~~~-----~-~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~ 402 (438)
T COG2270 329 SIAALYLIFL-----E-GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQ 402 (438)
T ss_pred HHHHHHHHHc-----c-ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHH
Confidence 7665555432 1 223333444455555566677778999999999999999999999999999999999999999
Q ss_pred hcCc-hhhHHHHHHHHHHHHHHHHhhccCCC
Q 008615 517 LLGA-ENIFLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 517 ~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
.+|- +..+....++.+++.++ +...|..+
T Consensus 403 iTg~~r~g~~~i~vll~iGl~~-L~~v~~~~ 432 (438)
T COG2270 403 ITGSSRAGVLSIIVLLLIGLLL-LLRVKVPG 432 (438)
T ss_pred HhcchhhHHHHHHHHHHhhHhh-EEeecCCC
Confidence 8874 44455555555555543 33444443
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.77 E-value=1e-17 Score=161.14 Aligned_cols=399 Identities=16% Similarity=0.196 Sum_probs=231.3
Q ss_pred ccccchhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008615 90 NQEAFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADF 169 (559)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr 169 (559)
+.++.+|+..+++.+.. ++.+...+++.+...+..++ -| .+.+.+..||+.++..++.+++++++|.+..|
T Consensus 27 ~~~~t~wrsi~l~~~~s----fl~~v~~sI~~~s~wpYl~~---lD--~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k 97 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNS----FLVAVQFSIYLTSMWPYLQK---LD--PTATATFFGLVIAASSLGHAIFSLIFGIWSNK 97 (488)
T ss_pred cccCCchHhHHHHHHHH----HHHhhhheEEEeecchhhhh---cC--CCCCcchhhHHHHHHHHHHHhcchhhcccccc
Confidence 34456677666555544 44444444443333222221 12 57788899999999999999999999999999
Q ss_pred hch-HHHHHHHHHHHHHHHHHH-Hhc---h-hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHH
Q 008615 170 LGR-KRELIIAAVLYALGALTT-AYA---P-GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVL 243 (559)
Q Consensus 170 ~Gr-r~~~~~~~~~~~i~~~~~-~~~---~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~ 243 (559)
.|. |+.++.|.++..+|+++. ++. + .-+.++++|++.|+|.| ......+|+++....++|.++++....+..+
T Consensus 98 ~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 98 TGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred cCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 997 899999999999999998 432 3 67889999999999988 6777889999988889999999999998888
Q ss_pred HHHHHHHhhhcccCCC-Cc-----------chHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHHHHH
Q 008615 244 GILLGYFVGSFQINAV-GG-----------WRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQAIS 310 (559)
Q Consensus 244 G~~~g~~l~~~l~~~~-~~-----------wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~ 310 (559)
|.++||.++..+.... .| +-.+-|+.+++.++.++.. +++.|.++--.. ++.++
T Consensus 177 g~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~-------------~~~~~ 243 (488)
T KOG2325|consen 177 GIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIID-------------KKKRS 243 (488)
T ss_pred HHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccc-------------ccccc
Confidence 8888888876654321 02 2345677777777766655 556665430000 00000
Q ss_pred HHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccC--chhHHHHHHHHHHHHHhhChhhHHHhHHHHHH
Q 008615 311 ALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGP--NLKAFIIGGGLVLFQQITGQPSVLYYAGPILQ 388 (559)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (559)
+ ++ .+ .-.+-.+.+ .+...+++....+...+.....-....+....
T Consensus 244 ---------------~---~~----------~~----~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~ 291 (488)
T KOG2325|consen 244 ---------------V---EE----------EK----SDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMV 291 (488)
T ss_pred ---------------c---hh----------hc----cchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHH
Confidence 0 00 00 000111111 11222222222222222222222233344444
Q ss_pred HcCCCCchhHHH---HHHHHHHHHHHHHHHHHHHh-hhcCCcchhhhhHHHHHHHHHHHHHHHHhhcC------------
Q 008615 389 SAGFSAAADATR---VSVVIGVFKLVMTWIAVAKV-DDLGRRPLLIGGVCGIALSLLLLSAYYKILGG------------ 452 (559)
Q Consensus 389 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~l~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 452 (559)
..+......... .....++..+...+...+.. .++.+|..+..+.+....+..+....+.....
T Consensus 292 ~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~ 371 (488)
T KOG2325|consen 292 MYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGC 371 (488)
T ss_pred HhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCc
Confidence 455554333333 33333333333333333332 23344555555544443333333211111000
Q ss_pred --------------chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc
Q 008615 453 --------------FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL 518 (559)
Q Consensus 453 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 518 (559)
+.+..+....+..+...........+..+|...+..+++..|+.......+..++|.+...+....
T Consensus 372 ~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~ 451 (488)
T KOG2325|consen 372 DFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLS 451 (488)
T ss_pred CcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhc
Confidence 000111111111111111111223356678888999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 519 GAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 519 g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
|+++.+.+.++..++...+...+.+
T Consensus 452 g~~~v~~~~~~~~l~~~~l~~~~~~ 476 (488)
T KOG2325|consen 452 GPRPVWIILLCLLLVVAALWIVFLK 476 (488)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887776666655554444333
No 117
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.75 E-value=4.2e-16 Score=156.13 Aligned_cols=378 Identities=18% Similarity=0.215 Sum_probs=252.5
Q ss_pred HHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 008615 104 LFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 183 (559)
++.++..+..++..+++...+..+.+. |+++.++.|++.+.+-++..+...+..+..-|.-|-+++-+|.+++
T Consensus 100 ~~l~~~~~~q~l~~~y~~s~IttiErR-------F~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m 172 (735)
T KOG3626|consen 100 VLLSLAAFAQGLYVGYFNSVITTIERR-------FKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLM 172 (735)
T ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhh-------cCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHH
Confidence 444555666777777777777777666 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhch-------------------h--------------------------------Hh-HHHHHHHHHHhhhh
Q 008615 184 ALGALTTAYAP-------------------G--------------------------------LG-VLLVGRLLYGLGIG 211 (559)
Q Consensus 184 ~i~~~~~~~~~-------------------~--------------------------------~~-~l~~~r~l~G~~~g 211 (559)
+++++++++-+ + ++ .++++.++.|+|..
T Consensus 173 ~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~T 252 (735)
T KOG3626|consen 173 GLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGAT 252 (735)
T ss_pred HHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCC
Confidence 99999998720 0 22 56667999999999
Q ss_pred hhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC------------------CcchHHHhhhHHHH
Q 008615 212 LAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV------------------GGWRYMYGLSAPLA 273 (559)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~------------------~~wr~~f~~~~~~~ 273 (559)
..++...+|+-|...+++-+..+|+..+...+|+++|.++|+++...+ +-|..-|++.+.+.
T Consensus 253 pi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~ 332 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALL 332 (735)
T ss_pred CCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999876422 14666688888888
Q ss_pred HHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhc
Q 008615 274 LLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVF 353 (559)
Q Consensus 274 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (559)
++..+.++++|....-. +.+...+..+..+.+++... ......+ +-+.-....+.++
T Consensus 333 ~~~a~p~f~fPk~lp~~-------------~~~~~~~~~~~~k~~~~~~~-~~~~~~~---------~ikdfp~s~~~ll 389 (735)
T KOG3626|consen 333 LFSAVPLFFFPKELPKS-------------QKRKRARDLHVLKTESGGAK-SDKTFGK---------KIKDFPKSIKRLL 389 (735)
T ss_pred HHHHHHHHhCcccCccc-------------cccchhhhhccccccccccc-CCcchhh---------hHHHHHHHHHHHh
Confidence 88888888888754200 00000000011111100000 0000000 0011123467788
Q ss_pred ccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHH-HHHHHHHHHHHHHhhhcCC--cchh
Q 008615 354 QGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIG-VFKLVMTWIAVAKVDDLGR--RPLL 429 (559)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~l~d~~~~--~~~~ 429 (559)
+||.+...++...+-. ..+..+..|+|.|+++ ++.+. ..+..+....+ .+..+|.+++|++..|+.- |...
T Consensus 390 ~N~if~~~~l~~~~~~----~~~~G~~tFlPKyLE~Qfg~sa-s~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a 464 (735)
T KOG3626|consen 390 SNPIFMLVVLASVIES----LAITGYITFLPKYLETQFGISA-SLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAA 464 (735)
T ss_pred cCchHHHHHHHHHHHH----HHHhhHHHhhHHHHHHHcCCCH-HHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHH
Confidence 8886665555444433 3445688899999976 55555 56666654444 4567888899999998754 3444
Q ss_pred hhhHHHHHHHHHHHHHHHH------------------------h------------------------------------
Q 008615 430 IGGVCGIALSLLLLSAYYK------------------------I------------------------------------ 449 (559)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~------------------------~------------------------------------ 449 (559)
...++...+..+.+..... .
T Consensus 465 ~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC 544 (735)
T KOG3626|consen 465 KFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGC 544 (735)
T ss_pred HHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCC
Confidence 4333333333333211100 0
Q ss_pred -----hc------------C--------------------chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhH
Q 008615 450 -----LG------------G--------------------FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRG 492 (559)
Q Consensus 450 -----~~------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 492 (559)
.. . .....++.+++..+....+..|.. .++...+|++.|..+
T Consensus 545 ~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~-~i~LR~V~~e~ks~A 623 (735)
T KOG3626|consen 545 TESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGM-LIVLRCVPPEEKSFA 623 (735)
T ss_pred cccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcce-EEEEEccCchhchhh
Confidence 00 0 001222222333333333334444 667788999999999
Q ss_pred HHHHHHH-HHHHHHHHHHhhHHHHHh
Q 008615 493 ISLAVLT-NFGSNAIVTFAFSPLKEL 517 (559)
Q Consensus 493 ~g~~~~~-~~~g~~i~~~i~g~l~~~ 517 (559)
+|+..++ +-+|.+-+|+++|+++|.
T Consensus 624 lG~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 624 LGFQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred hHHHHHHHHHHhcCCchHhhhhhHhh
Confidence 9998876 667888899999999985
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.70 E-value=2.2e-14 Score=134.06 Aligned_cols=329 Identities=17% Similarity=0.134 Sum_probs=216.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----hHHHHH-HHHHHHHHHHHHHHhc-----h--------h-Hh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLG-----RKRELI-IAAVLYALGALTTAYA-----P--------G-LG 197 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~~~-~~~~~~~i~~~~~~~~-----~--------~-~~ 197 (559)
+++...-++.+.++..+.. ...+.+|+.+|+.+ ||..++ .|.++.+.+..+..++ . . .+
T Consensus 10 L~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g 88 (403)
T PF03209_consen 10 LGVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLG 88 (403)
T ss_pred hccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHH
Confidence 8899999999999887765 46999999999999 776554 5666666665555542 2 2 22
Q ss_pred --HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhH--HHH
Q 008615 198 --VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSA--PLA 273 (559)
Q Consensus 198 --~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~--~~~ 273 (559)
...+.-.+.|+|.+...+...+++.|..|+++|+++.++.....-+|.+++..+.+.+.+.+..-|..-.+.. ++.
T Consensus 89 ~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~ 168 (403)
T PF03209_consen 89 LALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIA 168 (403)
T ss_pred HHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHH
Confidence 2334467789999999999999999999999999999999999999999999999998887744444433332 222
Q ss_pred HHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhc
Q 008615 274 LLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVF 353 (559)
Q Consensus 274 ~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (559)
++..++..+-.|.+. - .. ... ++.++..-...+++++
T Consensus 169 ~~l~~ia~wg~E~r~-~------------~~-----------~~~-------------------~~~~~~~f~~a~~~~~ 205 (403)
T PF03209_consen 169 LLLNLIALWGQEPRR-S------------RR-----------AAA-------------------AERPRPPFREAWRQVW 205 (403)
T ss_pred HHHHHHHHHhcccCC-c------------cc-----------ccC-------------------CCCCCccHHHHHHHHH
Confidence 222222233222211 0 00 000 0001111223466777
Q ss_pred ccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh-hcCCcchhhhh
Q 008615 354 QGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVD-DLGRRPLLIGG 432 (559)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~ 432 (559)
.+|+.+++.+..++..+.++.-....- |+=-+-+|.+. .+...++...+.+.++|-.+.|++.. |.++++...++
T Consensus 206 ~~~~a~~f~~fl~l~t~a~~~QD~iLE---Pygg~Vfgmsv-~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G 281 (403)
T PF03209_consen 206 ASPQARRFFVFLFLGTLAFFMQDVILE---PYGGEVFGMSV-GETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALG 281 (403)
T ss_pred hCCChhHHHHHHHHHHHHHHhhHHHcC---CchhHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Confidence 788877777655555443322111111 11123356666 78888999999999999999998766 67777877788
Q ss_pred HHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhH
Q 008615 433 VCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFS 512 (559)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g 512 (559)
..+..+++.++...... .+.+......++++.+.+ .+.....+...++..++..|..+|.....+.++..++..+.|
T Consensus 282 ~~~~~~~f~lii~a~~~--~~~~~~~~~~~l~G~g~G-~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG 358 (403)
T PF03209_consen 282 CLLGALAFALIILAGPL--GSPWLFRPGVFLLGLGNG-LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGG 358 (403)
T ss_pred HHHHHHHHHHHHHHHhc--ccchHHHHHHHHHHHhhh-HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666654332 234443333333333332 222233355667778899999999999999999999999999
Q ss_pred HHHHh
Q 008615 513 PLKEL 517 (559)
Q Consensus 513 ~l~~~ 517 (559)
.+.|.
T Consensus 359 ~~~D~ 363 (403)
T PF03209_consen 359 ALRDL 363 (403)
T ss_pred HHHHH
Confidence 88874
No 119
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.68 E-value=3.5e-18 Score=171.70 Aligned_cols=379 Identities=19% Similarity=0.194 Sum_probs=3.0
Q ss_pred HhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHH
Q 008615 110 GLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALT 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 189 (559)
.+..+...+++...+..+.+. |+++.++.|++.+.+-++..+..++..++.+|..|-|++-+|.++.++++++
T Consensus 12 ~~~q~~~~g~~~~~lttiErR-------F~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l 84 (539)
T PF03137_consen 12 GLFQMMVSGYVNSSLTTIERR-------FGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLL 84 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHH
Confidence 344456666666677777666 9999999999999999999999999999999988889999999999999998
Q ss_pred HHhch--------------------------------------------------hHhHHHHHHHHHHhhhhhhhhhhhh
Q 008615 190 TAYAP--------------------------------------------------GLGVLLVGRLLYGLGIGLAMHGAPL 219 (559)
Q Consensus 190 ~~~~~--------------------------------------------------~~~~l~~~r~l~G~~~g~~~~~~~~ 219 (559)
+++-+ -+..++++.++.|+|....++...+
T Consensus 85 ~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~t 164 (539)
T PF03137_consen 85 FALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGIT 164 (539)
T ss_dssp -------------------------------------------------------------------SSS----------
T ss_pred HhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceee
Confidence 87510 0346788899999999999999999
Q ss_pred hhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC---------------------CcchHHHhhhHHHHHHHHH
Q 008615 220 YIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV---------------------GGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 220 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---------------------~~wr~~f~~~~~~~~~~~~ 278 (559)
|+-|..++++-+..+|+..+...+|+++|.++|+.+++.+ +.|..-|++.+++.++..+
T Consensus 165 YiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~ai 244 (539)
T PF03137_consen 165 YIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAI 244 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999876421 1365566777777777666
Q ss_pred HhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCch
Q 008615 279 GMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNL 358 (559)
Q Consensus 279 ~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (559)
.++++|+...-... ..++.+. ++.+.++... +...+...........+.-....+++++||.+
T Consensus 245 pl~~FPk~lp~~~~-----------~~~~~~~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f 307 (539)
T PF03137_consen 245 PLFFFPKKLPGTSE-----------RQEEKES--SERKEEDSDK----DSFKDPKSKKSFGKSIKDFPKALKRLLTNPVF 307 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHcCCccCCCccc-----------ccchhhh--hhcchhhhhh----hcccccccccchhhhhhhHHHHHHHHhcChHH
Confidence 66777764320000 0000000 0000000000 00000000000001112224456788888866
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHH-HHHHHHHHHHHHHHhhhcCC--cchhhhhHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVI-GVFKLVMTWIAVAKVDDLGR--RPLLIGGVC 434 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~ 434 (559)
....++.....+ ....+..|.|.|++. ++.++ ..+.++.... ..+..+|.+++|++.+|++- |..+....+
T Consensus 308 ~~~~la~~~~~~----~~~G~~tF~pKylE~QF~~sa-s~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v 382 (539)
T PF03137_consen 308 MCLILAGVFESF----IVSGFATFLPKYLESQFGLSA-SQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIV 382 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHH----HHHHHHHHHHHHHHHHhCCCH-HHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHH
Confidence 655554444333 344678889999876 55554 5555554433 34678899999999999753 444433333
Q ss_pred HHHHHHHHHHHH--------------HHh-------h--c-------------------------Cchh-HHHHHHHHHH
Q 008615 435 GIALSLLLLSAY--------------YKI-------L--G-------------------------GFPL-VAVSALLLYV 465 (559)
Q Consensus 435 ~~~~~~~~~~~~--------------~~~-------~--~-------------------------~~~~-~~~~~~~~~~ 465 (559)
...++.+.+... ... . . .... ..++..++..
T Consensus 383 ~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~ 462 (539)
T PF03137_consen 383 VSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILS 462 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHH
Confidence 333333221100 000 0 0 0011 1122222223
Q ss_pred HHhhcccccccceeecccCCccchhhHHHHHHHH-HHHHHHHHHHhhHHHHHhc
Q 008615 466 GCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT-NFGSNAIVTFAFSPLKELL 518 (559)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~~i~g~l~~~~ 518 (559)
.+......|.. ...-..+|+++|+.+.|+...+ +.+|.+-+|+++|.+.|..
T Consensus 463 ~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 463 FFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ------------------------------------------------------
T ss_pred HHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 33333444444 4556788999999999999876 6668899999999999974
No 120
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.67 E-value=1.3e-15 Score=154.75 Aligned_cols=176 Identities=14% Similarity=0.088 Sum_probs=137.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHH---HHhchhHhHHHHHHHHHHhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALT---TAYAPGLGVLLVGRLLYGLGIGLAM 214 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~---~~~~~~~~~l~~~r~l~G~~~g~~~ 214 (559)
+|.+..+.++..+...++..++.++.|+++||+|||++++++.++..++.+. ...+++...+++++++.|++.+...
T Consensus 281 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 360 (490)
T PRK10642 281 LHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFT 360 (490)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 6788888888888899999999999999999999999998887654443332 2234567778889999998877777
Q ss_pred hhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhh
Q 008615 215 HGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRA 294 (559)
Q Consensus 215 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~ 294 (559)
.....++.|.+|++.|+.++++......++..++|.+.+++.+...+|+.++++..+++++.++..+++||+|+|+..+.
T Consensus 361 g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes~~~~~~~~ 440 (490)
T PRK10642 361 GVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGA 440 (490)
T ss_pred HHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccCCCCCCc
Confidence 77788889999999999999975555566678888888887765546888887777777777777778899998765431
Q ss_pred ccCCCchhhhHHHHHHHHHhhcC
Q 008615 295 VQGKGSLQEYKEQAISALGKLRR 317 (559)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~ 317 (559)
.+.+++.+|+++.++++++
T Consensus 441 ----~~~~~~~~~a~~~l~~~~~ 459 (490)
T PRK10642 441 ----TPAASDIQEAKEILVEHYD 459 (490)
T ss_pred ----cccccchhhHHHHhhcccc
Confidence 1234778889999988873
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.62 E-value=3e-15 Score=124.83 Aligned_cols=136 Identities=31% Similarity=0.444 Sum_probs=122.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcc
Q 008615 149 VSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQ 228 (559)
Q Consensus 149 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 228 (559)
.+.+.++..++.++.|++.||+|||+.+..+..+..++.++..+.++++.+++.+++.|++.+...+....++.|.+|++
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPE 83 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChh
Confidence 44567888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc-cCC
Q 008615 229 IRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS-LPP 285 (559)
Q Consensus 229 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~e 285 (559)
+|++.+++......+|..+++.+++.+.+.. +|++.|++.+++.++..+..++ .||
T Consensus 84 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 84 ERGVALGLMSAGIALGPLLGPPLGGVLAQFL-GWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhHHHHHHHHhHHHHHHHhHHhHHHHhccc-chHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999988776 8999999988887776665544 444
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.55 E-value=1.2e-13 Score=136.72 Aligned_cols=345 Identities=18% Similarity=0.121 Sum_probs=210.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhc-----hHHHHHHHHHHHHHHHHHHHhc----hhHhHHHHHHHHHHh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLG-----RKRELIIAAVLYALGALTTAYA----PGLGVLLVGRLLYGL 208 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G-----rr~~~~~~~~~~~i~~~~~~~~----~~~~~l~~~r~l~G~ 208 (559)
+|+++.+...+.++..+...+ .+++|.++|-+- ||+-++++.++.+++.+.++.. .+.....++-++..+
T Consensus 20 l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~ 98 (433)
T PF03092_consen 20 LGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASF 98 (433)
T ss_pred cCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHH
Confidence 999999999999988887766 677999999763 5556667777776666655553 356677777888899
Q ss_pred hhhhhhhhhhhhhhccCCc--ccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCc
Q 008615 209 GIGLAMHGAPLYIAETCPS--QIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPS 286 (559)
Q Consensus 209 ~~g~~~~~~~~~i~~~~~~--~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 286 (559)
|......++-+++.|...+ +.|+...+.......+|.+++..++|.+.+.. ++|+.|.+.+++.++..+..+++.|.
T Consensus 99 g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 99 GYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-GPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-CCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 9999999999999998843 34678888888899999999999999998887 89999999888877776655554332
Q ss_pred hHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHH-HH
Q 008615 287 PRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFII-GG 365 (559)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 365 (559)
.+ . +. .++. .....+ +.+. .... -++.....++.++.+..+...+ ..
T Consensus 178 ~~-~-------~~-----~~~~----~~~~~~-~~~~----~~~~----------~~~~~~~l~~~~~~~~i~~~~~~~~ 225 (433)
T PF03092_consen 178 RK-V-------RP-----ADEV----FSFGKE-EVPC----LFGS----------FREQLSELWRALQQRAIWQPILFFI 225 (433)
T ss_pred cc-c-------cc-----cchh----hccccc-ccch----hhHH----------HHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 10 0 00 0000 000000 0000 0000 0111122445555555554443 11
Q ss_pred HHHHHHHhhChhh-HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHH
Q 008615 366 GLVLFQQITGQPS-VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLS 444 (559)
Q Consensus 366 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 444 (559)
++..+.... ... ..++.......-++++ ...+.+..+..++.++|..+..+...+..-|+++....++..+..+.-.
T Consensus 226 ~~~~~~~~~-~~a~~fy~~~~~~~gp~fs~-~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~ 303 (433)
T PF03092_consen 226 FFFNLPPSI-SSASSFYFQTDALGGPHFSP-SFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDL 303 (433)
T ss_pred HHHHhccCC-CCccEEEEEeccccccccCH-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccE
Confidence 111111111 111 1112111111111444 5666666777777777777777666666666666555544433322211
Q ss_pred HHH-----HhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Q 008615 445 AYY-----KILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG 519 (559)
Q Consensus 445 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 519 (559)
... ...-...+..+.--.+........+.|.. ..++|+.|+..-|+.+++...+.++|..++..+...+.+.+|
T Consensus 304 ~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~l-vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 304 LLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSL-VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG 382 (433)
T ss_pred EEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHH-HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000 00001112233333344444444555555 667899999999999999999999999999999998888766
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=1.3e-13 Score=143.28 Aligned_cols=141 Identities=17% Similarity=0.130 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008615 145 LGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAET 224 (559)
Q Consensus 145 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 224 (559)
..+...+..++..++.++.|+++||+|||+++++++++.+++.++.+++++...+++++++.|++.++.++...++++|+
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl 676 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVEL 676 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556777899999999999999999999999999999999999999998888888899999998888999999999999
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCch
Q 008615 225 CPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSP 287 (559)
Q Consensus 225 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 287 (559)
+|.+.|++++|+..+...+|.++||++++.+... +...+|++.+++.++..++.+++||+.
T Consensus 677 ~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~--~~~~pf~i~a~~lll~~ll~~~LPET~ 737 (742)
T TIGR01299 677 YPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI--TKAAPILFASAALACGGLLALKLPDTR 737 (742)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999999999999999999999999887654 456788888888888777777788864
No 124
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.52 E-value=1.9e-12 Score=127.04 Aligned_cols=315 Identities=17% Similarity=0.190 Sum_probs=206.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhh--hhhhhhhhhhhhhccCCcc
Q 008615 151 GSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLG--IGLAMHGAPLYIAETCPSQ 228 (559)
Q Consensus 151 ~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~--~g~~~~~~~~~i~~~~~~~ 228 (559)
...+...+..+..|.++||+|||..+...++...+..+...+.. +|.++ +.|+. .+.......++++|....+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~ 144 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEE 144 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchh
Confidence 34677889999999999999999999999998888888777765 33333 44432 3446677888999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCCchHHHHHhhccCCCchhhhHHH
Q 008615 229 IRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGKGSLQEYKEQ 307 (559)
Q Consensus 229 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~~~~~~~~~~ 307 (559)
+|...+++.......+..++|.+++.+.... |.-..|++..+..++..+.. +++||+-.- ++.++
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~-~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~-------------~~~~~ 210 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFL-GIALVFLIAAASGILSLLYMLLFLPESLQE-------------KERSD 210 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHhhccccccCc-------------ccccc
Confidence 9999999999999999999999999988877 88889999988888876655 567886420 00000
Q ss_pred HHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcc---cCchhHHHHHHHHHHHHHhhChhhHHHhHH
Q 008615 308 AISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQ---GPNLKAFIIGGGLVLFQQITGQPSVLYYAG 384 (559)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (559)
...+......... ......+....+ ++....+.+...+.......+... ..+
T Consensus 211 -----~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~---~~~ 265 (463)
T KOG2816|consen 211 -----ATLRELTPGSLDS-----------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASD---VLL 265 (463)
T ss_pred -----ccccccCCCcccc-----------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCcee---EEE
Confidence 0000000000000 000000111111 122222222222222222111110 011
Q ss_pred HHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHH-HHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHH
Q 008615 385 PIL-QSAGFSAAADATRVSVVIGVFKLVMTWIAV-AKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALL 462 (559)
Q Consensus 385 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (559)
.++ ..++++. ...+.+.........++.++.. .+...++.++....|+....+....+++. +..|..+....
T Consensus 266 ~yl~~~f~w~~-~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~-----~~~w~~~~~~v 339 (463)
T KOG2816|consen 266 LYLKAKFGWNK-KEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFA-----TETWMMFAAGV 339 (463)
T ss_pred EEEeeecCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHh-----ccchhhhHHHH
Confidence 122 2356776 6777777777777777777776 77788898888888888888887777763 33443332222
Q ss_pred HHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008615 463 LYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL 517 (559)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 517 (559)
+ ..+.....|...+.......++.+|++.++...+..+...++|.+.+.+...
T Consensus 340 ~--~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~ 392 (463)
T KOG2816|consen 340 V--VALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFAL 392 (463)
T ss_pred H--HHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHH
Confidence 2 2233344566668888888999999999999999999999999999988654
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.51 E-value=5.1e-13 Score=132.12 Aligned_cols=146 Identities=14% Similarity=0.116 Sum_probs=125.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.+..+.+++.+...++..++.+++|+++||+|||+.+..+.+...+......+.++.+.+++.+++.+++.|...+..
T Consensus 247 ~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 247 LHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999888888888999999999999999998888777666665555567788888889999998888777777
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCC
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPP 285 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 285 (559)
..+..|.+|+ +|++++++++...++|..+++.+++.+.+.. ||+..|++.+++.++..+..++.+|
T Consensus 327 ~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 327 MLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIW-NYHAVFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8888999875 5999999999999999999999999998877 9999999988888887777776654
No 126
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.50 E-value=9.3e-13 Score=124.30 Aligned_cols=178 Identities=20% Similarity=0.178 Sum_probs=151.3
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+..++...+..|...+......-.+|.+.++++.+. ..+|...+.+.++..++.++...+.+|+.||++++..+.++.+
T Consensus 12 ~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~-~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 12 WLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSE-GAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHH
Confidence 334444445555555555567788899999999998 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL 518 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 518 (559)
+.++..+ ..++..+...=+..+.....+.++...+..+++|+++|++++++......++..+|.++..++-|.+
T Consensus 91 ~n~l~al------Ap~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~ 164 (394)
T COG2814 91 SNLLSAL------APSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLF 164 (394)
T ss_pred HHHHHHH------hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9888876 3345555555555566666666777789999999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhcc
Q 008615 519 GAENIFLLFAAIAFLAVLFIVRTVP 543 (559)
Q Consensus 519 g~~~~~~~~~~~~~~~~~~~~~~~~ 543 (559)
||+.+|+..+++.++..+..+..+|
T Consensus 165 GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 165 GWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999898888
No 127
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=1.1e-13 Score=138.22 Aligned_cols=147 Identities=16% Similarity=0.217 Sum_probs=128.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+..
T Consensus 257 ~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 336 (420)
T PRK09528 257 PEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGV 336 (420)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667889999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred hhhhhccCCcccchhhhhH-HHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCC
Q 008615 218 PLYIAETCPSQIRGTLISL-KELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPP 285 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e 285 (559)
..++.+.+|++.|+...+. ++....+|.++++.++|++.+.. |||..|++.+++.++..++. +.+++
T Consensus 337 ~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~-G~~~~f~~~~~~~~i~~~~~~~~~~~ 405 (420)
T PRK09528 337 FKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI-GFQGTYLILGGIVLLFTLISVFTLSG 405 (420)
T ss_pred HHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh-CchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999999988887655 67788999999999999999987 89999999888877655544 33444
No 128
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.48 E-value=1.6e-13 Score=136.23 Aligned_cols=147 Identities=18% Similarity=0.301 Sum_probs=126.1
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch----hHhHHHHHHHHHHhhhhhhhh
Q 008615 140 LSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP----GLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 140 ~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~----~~~~l~~~r~l~G~~~g~~~~ 215 (559)
.+....+.+.++..++..++.++.|+++||+|||++++++.++.+++.++..... +++.+++.+++.|++.+...+
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~ 327 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNI 327 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHH
Confidence 3457789999999999999999999999999999999999999988877776632 346677889999999998889
Q ss_pred hhhhhhhccCCcccchhhhhHHH-HHHHHHHHHHHHhhhcccCCCC-----cchHHHhhhHHHHHHHHHHh-hccCCc
Q 008615 216 GAPLYIAETCPSQIRGTLISLKE-LFIVLGILLGYFVGSFQINAVG-----GWRYMYGLSAPLALLMGIGM-WSLPPS 286 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~-----~wr~~f~~~~~~~~~~~~~~-~~~~e~ 286 (559)
....++.|++|+++|++++++.+ ...++|.++||+++|.+.+..+ ||+..|++.+++.++..++. ++++|+
T Consensus 328 ~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 328 SGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999999999999999997 6789999999999999887631 69999999888888766655 556665
No 129
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.48 E-value=1.7e-12 Score=128.95 Aligned_cols=181 Identities=14% Similarity=0.046 Sum_probs=137.9
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
|...+..++.++.............|.+.++++.+. .+.++......++..++.+..|++.||+|||+.+..+.++..+
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~ 85 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSA-TMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGI 85 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCH-HHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHH
Confidence 344444455555555545556667777778888887 8899999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH--
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE-- 516 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~-- 516 (559)
+.++..+. .+ ...+...-++.+.......+....++.|.+|+++|++++|+.+....+|..+++.+.+.+.+
T Consensus 86 ~~~~~~~~-----~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 159 (412)
T TIGR02332 86 ASTATMFA-----TG-PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALD 159 (412)
T ss_pred HHHHHHHh-----cC-HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 87776642 22 23333334444444445556666778999999999999999999999999999999998875
Q ss_pred ----hcCchhhHHHHHHHHHHHHHHHHhhccCCC
Q 008615 517 ----LLGAENIFLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 517 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
..||++.|++.++..++..++.++++||++
T Consensus 160 ~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 160 GLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 358999999988877776666666777764
No 130
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.47 E-value=3.8e-13 Score=132.61 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=123.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhH--hHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGL--GVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~ 215 (559)
++.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.+++.++..+.++. ..+++..++.|++.+...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 314 (377)
T TIGR00890 235 LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTIS 314 (377)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchh
Confidence 78888899999999999999999999999999999999999999998888888776643 3345667888998888888
Q ss_pred hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHH
Q 008615 216 GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMG 277 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~ 277 (559)
....++.|.+|+++|++++++......+|..++|.+++.+.+.. ||++.|++.+++.++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 315 LFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-GFEYTFIVTGAFALTSL 375 (377)
T ss_pred ccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-chhhHHHHHHHHHHHhc
Confidence 88889999999999999999999999999999999999988877 99999999887776643
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=9.2e-13 Score=128.50 Aligned_cols=145 Identities=37% Similarity=0.512 Sum_probs=136.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHH-HHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKR-ELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~-~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
+|.+..+.+++.+...++..++.++.|++.||+|||+ .+..+.++..++.++..+.++.+.+++..++.|++.+...+.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 206 LGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPA 285 (352)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchh
Confidence 4889999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhcc
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSL 283 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 283 (559)
...++.|..|+++|++.+++......+|..+++.+.+.+.+.. +|++.+++.+++.++..+..+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~-~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 286 LLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG-GYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcchHHHHHHHHHHHHHHHheec
Confidence 9999999999999999999999999999999999999998877 99999999999998877766543
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=3.1e-12 Score=126.61 Aligned_cols=160 Identities=16% Similarity=0.113 Sum_probs=125.6
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
.....|.+.++++.+. .+.++......++..++.+..|++.||+|||+++..+.++.+++.+..... ++.+. +
T Consensus 28 ~~~~~~~l~~~~~~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~-l 100 (390)
T PRK03545 28 PVGLLSDIAQSFHMQT-AQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALA-----WNFTV-L 100 (390)
T ss_pred HHcchHHHHhHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHh-----ccHHH-H
Confidence 3345688888899887 888999999999999999999999999999999999988888887766542 22333 3
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 538 (559)
....+..+.......+...+++.|.+|+++|++++|+......+|..++|++.+.+.+..||++.|++.+++.++..++.
T Consensus 101 ~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 101 LISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334455557888999999999999999999999999999999999999999999999888877776665
Q ss_pred HhhccCC
Q 008615 539 VRTVPET 545 (559)
Q Consensus 539 ~~~~~~~ 545 (559)
+...|+.
T Consensus 181 ~~~~~~~ 187 (390)
T PRK03545 181 IKLLPLL 187 (390)
T ss_pred HHhCCCC
Confidence 5555554
No 133
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.45 E-value=3.4e-12 Score=125.97 Aligned_cols=160 Identities=21% Similarity=0.179 Sum_probs=124.9
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
.....|.+.++.+.++ .+.++......++..++.++.|++.||+|||+.+..+.++.+++.++.... .+.+ .+
T Consensus 39 ~~~~l~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-----~~~~-~l 111 (394)
T PRK10213 39 PVSLLTPMAQDLGISE-GVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFA-----NSFS-LL 111 (394)
T ss_pred HHhhHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHH-----ChHH-HH
Confidence 3345677888888887 788888888999999999999999999999999999999888877665532 2223 33
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 538 (559)
...-+..+.......+....++.|.+|+++|+.+.++......++..++|.+.+.+.+..||++.|++.+++.++..++.
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~ 191 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWI 191 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444556667889999999999999999999999999999999999999999999998877766655554
Q ss_pred HhhccCC
Q 008615 539 VRTVPET 545 (559)
Q Consensus 539 ~~~~~~~ 545 (559)
....||.
T Consensus 192 ~~~~p~~ 198 (394)
T PRK10213 192 IKSLPSL 198 (394)
T ss_pred HHHCCCC
Confidence 4445654
No 134
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.45 E-value=1.2e-12 Score=129.98 Aligned_cols=141 Identities=21% Similarity=0.230 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 008615 144 QLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAE 223 (559)
Q Consensus 144 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 223 (559)
+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+.....+.|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~ 329 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVK 329 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 45666778889999999999999999999999999999888888888888888888889999999999888888888889
Q ss_pred cCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCC
Q 008615 224 TCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPP 285 (559)
Q Consensus 224 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 285 (559)
.+|+++|+++.+++.....+|..+++.+.+.+.+.. ||++.|++.+++.++..+..+++++
T Consensus 330 ~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 330 RVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF-GYPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999988877 8999999988888887666655544
No 135
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.45 E-value=2.2e-12 Score=127.64 Aligned_cols=164 Identities=20% Similarity=0.087 Sum_probs=128.1
Q ss_pred hhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 377 PSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
.......|.+.++.+.++ .+.++......++..++.++.|++.||+|||+.+..+.++.+++.+.+... + ...
T Consensus 22 ~~~~~~~p~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~-~~~ 94 (385)
T TIGR00710 22 DMYLPAFPEIAADLSTPA-SIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALS-----N-NIE 94 (385)
T ss_pred HHhcccHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----c-cHH
Confidence 344455677888888887 789999999999999999999999999999999999888887777766542 2 222
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
.+....+..+.......+....++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..||+..+++.+++.++..+
T Consensus 95 ~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 174 (385)
T TIGR00710 95 TLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSA 174 (385)
T ss_pred HHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 23333333343333344555678899999999999999999999999999999999999999999999888887777776
Q ss_pred HHHhhccCCCC
Q 008615 537 FIVRTVPETKG 547 (559)
Q Consensus 537 ~~~~~~~~~~~ 547 (559)
+.++..||.++
T Consensus 175 ~~~~~~~~~~~ 185 (385)
T TIGR00710 175 LIFFILPETLP 185 (385)
T ss_pred HHHHhCCCCCC
Confidence 66666666543
No 136
>TIGR00895 2A0115 benzoate transport.
Probab=99.44 E-value=1.4e-12 Score=129.65 Aligned_cols=178 Identities=19% Similarity=0.141 Sum_probs=132.7
Q ss_pred HHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHH
Q 008615 361 FIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSL 440 (559)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 440 (559)
.++...+..+...........+.|.+.++.+.+. .+.++......++.+++.++.|+++||+|||+.+..+.++.+++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~ 96 (398)
T TIGR00895 18 AIILSFLIMLMDGYDLAAMGFAAPAISAEWGLDP-VQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFT 96 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhhccCCCH-HHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3333333333333333456667788888888877 788999999999999999999999999999999998888777776
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCc
Q 008615 441 LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGA 520 (559)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~ 520 (559)
+++... . +...+....++.++......+...+++.|.+|++.|+++.++.+....+|..+++.+.+.+.+..||
T Consensus 97 ~~~~~~-----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~ 170 (398)
T TIGR00895 97 LLCALA-----T-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW 170 (398)
T ss_pred HHHHHc-----c-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc
Confidence 665532 2 2223333334444444444566668899999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 521 ENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
+..+++.+++.++..++.+.+.++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 171 RSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred eeehhhhhhHHHHHHHHHHHhCCCC
Confidence 9988888766666666666666654
No 137
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.44 E-value=3.5e-12 Score=127.85 Aligned_cols=161 Identities=14% Similarity=0.109 Sum_probs=124.7
Q ss_pred hhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 377 PSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
..+..+.|.+.++.+.+. .+.++......++..++.++.|++.||+|||+.+.++.++.+++.+++... .+.+
T Consensus 40 ~~~~~~~~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~- 112 (434)
T PRK11663 40 KSFNAAMPEMLADLGLSR-SDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFS-----SSLW- 112 (434)
T ss_pred hhHHHhhHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHH-----hHHH-
Confidence 356677889999999987 788999999999999999999999999999999999988888887766542 2222
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
.+....+..+.......+....++.|.+|+++|++++|+.+....+|..+++.+.+.+.+..||++.|++.+++.++..+
T Consensus 113 ~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~ 192 (434)
T PRK11663 113 AFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGL 192 (434)
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 22222223333333334455578889999999999999999999999999999999999999999999888777665555
Q ss_pred HHHhhccC
Q 008615 537 FIVRTVPE 544 (559)
Q Consensus 537 ~~~~~~~~ 544 (559)
+..+..+|
T Consensus 193 ~~~~~~~~ 200 (434)
T PRK11663 193 FLCWRLRD 200 (434)
T ss_pred HHHHHcCC
Confidence 44444444
No 138
>PRK10054 putative transporter; Provisional
Probab=99.43 E-value=4.5e-12 Score=125.18 Aligned_cols=161 Identities=12% Similarity=0.040 Sum_probs=119.4
Q ss_pred hhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchh
Q 008615 377 PSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPL 455 (559)
Q Consensus 377 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (559)
.....+.+.+++ +.|.+. .+.++......++.+++.++.|+++||+|||+.+..+.++.+++.+++.+. ++.+
T Consensus 24 ~~~~~~l~~~l~~~~g~s~-~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~-----~~~~ 97 (395)
T PRK10054 24 GATLPFMTIYLSRQYSLSV-DLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLV-----NNVT 97 (395)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH-----hHHH
Confidence 345556666664 568877 889999999999999999999999999999999988888777776665542 2222
Q ss_pred HHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHH
Q 008615 456 VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAV 535 (559)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 535 (559)
..+....+. +.......+....+..|.+|+++|+++.|+.+...++|..++|.+.+.+.+ .||+..|.+.+++.++..
T Consensus 98 ~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 98 LVVLFFALI-NCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPL 175 (395)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHH
Confidence 222222222 222223345556778899999999999999999999999999999998875 689999998887777766
Q ss_pred HHHHhhccCC
Q 008615 536 LFIVRTVPET 545 (559)
Q Consensus 536 ~~~~~~~~~~ 545 (559)
++..+..++.
T Consensus 176 i~~~~~~~~~ 185 (395)
T PRK10054 176 VFIQIWVQRS 185 (395)
T ss_pred HHHHHHHhcc
Confidence 5555544443
No 139
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.42 E-value=1.8e-12 Score=129.10 Aligned_cols=147 Identities=22% Similarity=0.193 Sum_probs=127.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.|.+..+.+++.+.+.++..++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|++.+...+..
T Consensus 250 ~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 329 (406)
T PRK11551 250 QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVL 329 (406)
T ss_pred CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHH
Confidence 68889999999999999999999999999999999999988877777777777777888888888889999888888889
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccC
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLP 284 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 284 (559)
.+++.|.+|+++|++++++......+|..+||.+++.+.+...+|...+++.....++..++.+++.
T Consensus 330 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 330 YALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred HHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999988764677777777766666665555443
No 140
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.42 E-value=1.5e-10 Score=106.93 Aligned_cols=234 Identities=15% Similarity=0.155 Sum_probs=153.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.+..|++.+....+...++..++.|.++||+|||+.-++..++++++++ +-..++++.++++|++.|++....+.+-
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~F 142 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAF 142 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999988886 5556899999999999999999988887
Q ss_pred hhhh-hccC----CcccchhhhhHHH-HHHHHHHHHHHHhhhcccCCCC-cchHHHhhhHHHHHHHHHHhh-ccCCchHH
Q 008615 218 PLYI-AETC----PSQIRGTLISLKE-LFIVLGILLGYFVGSFQINAVG-GWRYMYGLSAPLALLMGIGMW-SLPPSPRW 289 (559)
Q Consensus 218 ~~~i-~~~~----~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~-~~~e~p~~ 289 (559)
-++. .|.- |++..+..++... ...++-.+++.+++.++.+..+ |-..+|....++.++..+++. ..+|...
T Consensus 143 EsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg- 221 (354)
T PF05631_consen 143 ESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYG- 221 (354)
T ss_pred HHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCC-
Confidence 7764 4432 2222333333333 2233444555666666655441 347889888888877666654 3455321
Q ss_pred HHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHH
Q 008615 290 LLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVL 369 (559)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (559)
+ ..... +. .+.-+..++.++++|+.+.+- ....
T Consensus 222 --------~--------------------~~~~~----~~------------~~~~~~a~~~i~~d~ril~LG---~~qs 254 (354)
T PF05631_consen 222 --------D--------------------TSSSS----SL------------SGSFREAWRAILSDPRILLLG---LIQS 254 (354)
T ss_pred --------C--------------------ccccc----ch------------HHHHHHHHHHHHcCchhHHHH---HHHH
Confidence 0 00000 00 000011234455565443332 3333
Q ss_pred HHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 370 FQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
+.....+..+..|.|.+- ..+.....|+++..+.+..++|+.+..++..+.
T Consensus 255 lFE~smy~FVflWtPaL~---~~~~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 255 LFEGSMYLFVFLWTPALD---PDDEELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred HHHHHHHHheeeeeceec---CCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344444445666777765 222224688999999999999998887665543
No 141
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.42 E-value=6.3e-11 Score=112.54 Aligned_cols=352 Identities=15% Similarity=0.139 Sum_probs=214.0
Q ss_pred cccchhHHH-HHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLG-LVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g-~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
.|++..|+. -+.-...-.+....++...+.|..|.|++++++.+...+..++.-+.++...+.+..++-|++.+ ...+
T Consensus 35 kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a-~eva 113 (412)
T PF01770_consen 35 KNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATA-AEVA 113 (412)
T ss_pred cCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHH-HHHH
Confidence 588888764 55666667788899999999999999999999999999999999999999999999999999888 4777
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC-CcchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhc
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV-GGWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAV 295 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~ 295 (559)
-.+++-...|+++-.++.+...++..+|..++.++|-.++... .+.+...++......+.++..+++|..++-..-+++
T Consensus 114 y~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~ 193 (412)
T PF01770_consen 114 YYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRK 193 (412)
T ss_pred HHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceecc
Confidence 8889988899999999999999999999999999988776632 255666666666666666666788876643222211
Q ss_pred cCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhC
Q 008615 296 QGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITG 375 (559)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (559)
.+......+.+ .+...+.++.......+... ........-..-...+++..++|......+...+ ...+
T Consensus 194 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~----atcg 262 (412)
T PF01770_consen 194 PPAEQDANESE-----SDKMNESPESSSSTEKSPST--ESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAF----ATCG 262 (412)
T ss_pred Ccccccccccc-----ccccccccccccccccCccc--ccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHH----HHhH
Confidence 11000000000 00000000000000000000 0000000000112235556667655544433333 3333
Q ss_pred hhhHHHhHHHHHHHcC--CCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHH--HHHHHHHHHHHhhc
Q 008615 376 QPSVLYYAGPILQSAG--FSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIA--LSLLLLSAYYKILG 451 (559)
Q Consensus 376 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (559)
+..+..|...+.++.. ......-|.+-....+.+.++.+..|++..++.+..-+..+.+... ..++++.. .
T Consensus 263 y~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~-----t 337 (412)
T PF01770_consen 263 YYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSF-----T 337 (412)
T ss_pred HHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHH-----h
Confidence 4457777777777761 1122456777777778888888899988666665444443333322 22222222 2
Q ss_pred CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHH
Q 008615 452 GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIV 507 (559)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~ 507 (559)
.+.|...+..+++.+.+........ .-++.....+.-|...|+++++..+-..+.
T Consensus 338 ~~Iwv~Y~~yIif~~~y~fliTiA~-~qIA~~l~~e~yaLVFGiNtf~Al~LQtil 392 (412)
T PF01770_consen 338 GNIWVCYAGYIIFRSLYMFLITIAS-FQIAKNLSEERYALVFGINTFVALVLQTIL 392 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccccceeeeeeeHHHHHHHHHHhe
Confidence 4556666666666666655443333 334444456777888888777655544433
No 142
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.41 E-value=5.1e-12 Score=124.53 Aligned_cols=145 Identities=17% Similarity=0.158 Sum_probs=126.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.++.+.+++.+...+...++.++.|++.||+|||+++.++.++..+..++..+.++.+.+++.+++.|++.+...+..
T Consensus 230 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 230 LGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999888888888899999999999999999988887777666666677888888889999999999888888
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccC
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLP 284 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 284 (559)
..++.|..|+ +++++++++.....+|..++|.+++.+.+.. ||+..|++.+++.++..++..+++
T Consensus 310 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 374 (375)
T TIGR00899 310 MLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERW-SYHAVYWFAIVMLIVALFCLLLIK 374 (375)
T ss_pred HHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHheec
Confidence 8899998875 5679999999999999999999999988877 899999999988888777766554
No 143
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=7.2e-12 Score=116.76 Aligned_cols=161 Identities=14% Similarity=0.103 Sum_probs=137.3
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
.+..-.|.+.++.+++. .+.+.+.+.+.+..-++-++.|.++||.+.|..+..++++.++..+++++. ++...
T Consensus 47 nF~~a~p~l~e~~~lsk-~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs------~s~~~ 119 (448)
T COG2271 47 NFNLAMPALIEDGGLSK-TQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFS------PSLFL 119 (448)
T ss_pred hHhhccHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhh------hHHHH
Confidence 46666788888888887 899999999999999999999999999999999999999999999999863 34555
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh--HHHHHhcCchhhHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF--SPLKELLGAENIFLLFAAIAFLAV 535 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~--g~l~~~~g~~~~~~~~~~~~~~~~ 535 (559)
+.++..+.+.+...-.|.....+..-+|+++||+..++.|+..++|+++.|++. +.+.++.+|+..|++-++++++..
T Consensus 120 ~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiiva 199 (448)
T COG2271 120 FAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVA 199 (448)
T ss_pred HHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHH
Confidence 555556666655554555557788899999999999999999999999999999 899998899999999999999888
Q ss_pred HHHHhhccCC
Q 008615 536 LFIVRTVPET 545 (559)
Q Consensus 536 ~~~~~~~~~~ 545 (559)
++.++..+++
T Consensus 200 l~~~~~~rd~ 209 (448)
T COG2271 200 LILLFLLRDR 209 (448)
T ss_pred HHHHHHhCCC
Confidence 8888777654
No 144
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=2.9e-12 Score=126.94 Aligned_cols=137 Identities=21% Similarity=0.201 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008615 145 LGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAET 224 (559)
Q Consensus 145 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 224 (559)
.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++.|++.+...+...+.+.|.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~ 330 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKR 330 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 45666778888899999999999999999999999999999888888888888888899999999998888888889999
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 225 CPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 225 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
+|+++|++++++++....+|..++|.+.+.+.+.. ||++.|++.+++.++..++.++
T Consensus 331 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 331 VPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF-GYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999887 9999999999888776665543
No 145
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.40 E-value=6.5e-12 Score=124.43 Aligned_cols=172 Identities=16% Similarity=0.079 Sum_probs=128.9
Q ss_pred HHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHH
Q 008615 368 VLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYY 447 (559)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (559)
..+....+........|.+.++.+.+. .+.++......++..++.++.|+++||+|||+.+..+.++..++..++...
T Consensus 11 ~~~~~~~~~~~~~~~lp~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~- 88 (392)
T PRK10473 11 LVLLYPAGIDMYLVGLPRIAADLNASE-AQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLA- 88 (392)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHh-
Confidence 333333344455567888888888887 788888999999999999999999999999999998888877777665532
Q ss_pred HhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHH
Q 008615 448 KILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLF 527 (559)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~ 527 (559)
.+.+..+. ..+..+.......+....++.|.+|+++|+++.++.+....++..++|.+.+.+.+..||+..+++.
T Consensus 89 ----~~~~~~~~-~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~ 163 (392)
T PRK10473 89 ----ETSSLFLA-GRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTM 163 (392)
T ss_pred ----CcHHHHHH-HHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHH
Confidence 22222222 2233333333334455678889999999999999999999999999999998888888999999888
Q ss_pred HHHHHHHHHHHHhhccCCC
Q 008615 528 AAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~ 546 (559)
+++.++..++.+...+|++
T Consensus 164 ~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 164 AAMGILVLLLSLFILKETR 182 (392)
T ss_pred HHHHHHHHHHHHHHcCCCC
Confidence 8887777776666666654
No 146
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.40 E-value=7.4e-12 Score=123.32 Aligned_cols=141 Identities=15% Similarity=0.048 Sum_probs=128.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.++.++|++.+...++..++.++.+++.||+|+|+.+.++.++.++..++.+++++++.+++.+++.|++.+...+..
T Consensus 235 ~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~ 314 (382)
T TIGR00902 235 AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHH-HHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhh
Q 008615 218 PLYIAETCPSQIRGTLISLKE-LFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMW 281 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~ 281 (559)
..++.+. |+++|++..++++ ...++|..+|+.++|++.+.. |+ ..|++.++++++..++.+
T Consensus 315 ~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-g~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 315 MRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-GA-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHHHHH
Confidence 9999998 8989999999986 578899999999999999988 76 667777777776555444
No 147
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.39 E-value=3e-12 Score=130.90 Aligned_cols=165 Identities=19% Similarity=0.144 Sum_probs=132.1
Q ss_pred ChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCch
Q 008615 375 GQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFP 454 (559)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (559)
.........|.+.++.+.+. .+.++......++..++.++.|++.||+|||+.+..+.++..++.++... ..+
T Consensus 17 ~~~~~~~~~p~~~~~~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~------~~~ 89 (485)
T TIGR00711 17 DSTIVNVAIPTIAGDLGSSL-SQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGV------APN 89 (485)
T ss_pred HHHHHHHHHHHHHHhcCCCh-hhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhC------cCC
Confidence 33456677888889998887 78899999999999999999999999999999999998888887776653 123
Q ss_pred hHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHH
Q 008615 455 LVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLA 534 (559)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~ 534 (559)
...+....+..+.......+....++.|.+|+++|+++.++......+|..++|.+.+.+.+..||++.|++.+.+.++.
T Consensus 90 ~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~ 169 (485)
T TIGR00711 90 LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIV 169 (485)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHH
Confidence 33344444444555455556667889999999999999999999999999999999999999999999999888777777
Q ss_pred HHHHHhhccCCC
Q 008615 535 VLFIVRTVPETK 546 (559)
Q Consensus 535 ~~~~~~~~~~~~ 546 (559)
.++.++..++.+
T Consensus 170 ~~~~~~~~~~~~ 181 (485)
T TIGR00711 170 VVVAFFILPRDK 181 (485)
T ss_pred HHHHHHHcCCcc
Confidence 666666666543
No 148
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.39 E-value=8.2e-12 Score=127.21 Aligned_cols=179 Identities=15% Similarity=0.059 Sum_probs=133.5
Q ss_pred HHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHH
Q 008615 361 FIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSL 440 (559)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 440 (559)
.++..++..+....-...+..-.|.+.++++.+. .+.++....+.++..++.+..|+++||+|||+.+..+.++..++.
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~-~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~ 85 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASG-NELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLAS 85 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 3444444444444445567777899999988876 678889999999999999999999999999999999999888887
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeeccc-CCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Q 008615 441 LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEI-FPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG 519 (559)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 519 (559)
++.... ++.+. ++..-++.+.......+.....+.+. .|+++|++++|+......+|..++|.+.|.+.+..|
T Consensus 86 ~~~~~a-----~~~~~-li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 86 LAAAFS-----PTASW-LIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHc-----CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 776642 22333 33333333333333444433444444 477999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhhccCCC
Q 008615 520 AENIFLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
|++.|++...+.++..++.+++.|+.+
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999988777777776666666643
No 149
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=1.2e-11 Score=123.67 Aligned_cols=189 Identities=15% Similarity=0.040 Sum_probs=132.7
Q ss_pred chhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Q 008615 349 FLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL 428 (559)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 428 (559)
++.+.+++.++...+...+..+.. .......|.+.++.+.+. .+.++......++.+++.++.|+++||++||+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~s~-~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~ 84 (417)
T PRK10489 10 LSLLKTHPAFRAVFIARFISIFGL----GLLGVAVPVQIQMMTGST-LQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL 84 (417)
T ss_pred HHHHHhCCChhhHHHHHHHHHHHH----HHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE
Confidence 444556777776665544444433 245667788888877766 789999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHH
Q 008615 429 LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVT 508 (559)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 508 (559)
+..+..+.+++...+...... ..+....+....+..+.......+....++.+.+|+++++++.++.+....+|..++|
T Consensus 85 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 163 (417)
T PRK10489 85 ILLARGTCGLGFIGLALNAFL-PEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISP 163 (417)
T ss_pred EEehHHHHHHHHHHHHHHHHc-CCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHH
Confidence 988877777766555432111 1222223333333333332223344457788999999999999999999999999999
Q ss_pred HhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 509 FAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 509 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
.+.+.+.+..|+++.+++.++..+++.++. ...|+
T Consensus 164 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 198 (417)
T PRK10489 164 ALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPA 198 (417)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCC
Confidence 999999998899888887776666555443 33444
No 150
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.39 E-value=5.4e-12 Score=125.33 Aligned_cols=162 Identities=17% Similarity=0.117 Sum_probs=128.3
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
.+....|.+.++.+.+. .+.++......++..++.++.|++.||+|||+.+..+.++.+++..++... . +...
T Consensus 12 ~~~~~~~~~~~~~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~-----~-~~~~ 84 (399)
T TIGR00893 12 NLSFAAPMLQEDLGLSA-AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFA-----G-AYVS 84 (399)
T ss_pred hhhHhHHHHHHhhCCCh-hhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHH-----c-CHHH
Confidence 35556677778888887 788999999999999999999999999999999999888887777766542 2 2333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
+....++.+.......+....++.|.+|+++|++++++.+....+|..+++.+.+.+.+..+|++.|++.+++.++..++
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVL 164 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 33333444444444556666889999999999999999999999999999999999999999999999888877777666
Q ss_pred HHhhccCCC
Q 008615 538 IVRTVPETK 546 (559)
Q Consensus 538 ~~~~~~~~~ 546 (559)
.++..++++
T Consensus 165 ~~~~~~~~~ 173 (399)
T TIGR00893 165 WLKFIPDPP 173 (399)
T ss_pred hhheecCCC
Confidence 665555543
No 151
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.38 E-value=1.2e-11 Score=121.85 Aligned_cols=163 Identities=14% Similarity=0.040 Sum_probs=126.2
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
......|.+.++.|.+. .+.++......++..++.++.|++.||+|||+.+..+..+.+++.++.... ++.+.
T Consensus 21 ~~~~~l~~~~~~~g~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~-----~~~~~- 93 (382)
T PRK10091 21 GIMGVLTELAHDVGISI-PAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLS-----SSYLM- 93 (382)
T ss_pred HHHhChHHHHHHcCCCH-HHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHh-----CcHHH-
Confidence 45567788888888887 788999999999999999999999999999999999988888877766542 22333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
+....++.+.......+....++.|.+|+++|++++++......++..+++.+.+.+.+..||++.|.+.+++.++..+.
T Consensus 94 l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 173 (382)
T PRK10091 94 LAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLAS 173 (382)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHH
Confidence 33333333333333334444667888998899999999999999999999999999999899999999988877766665
Q ss_pred HHhhccCCCC
Q 008615 538 IVRTVPETKG 547 (559)
Q Consensus 538 ~~~~~~~~~~ 547 (559)
.++..||.++
T Consensus 174 ~~~~lp~~~~ 183 (382)
T PRK10091 174 IYFWVPDIRD 183 (382)
T ss_pred HHHhCCCCCc
Confidence 5666676543
No 152
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=3.2e-12 Score=127.55 Aligned_cols=138 Identities=21% Similarity=0.298 Sum_probs=123.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 008615 144 QLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAE 223 (559)
Q Consensus 144 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 223 (559)
..+.+.+++.++..++.+++|+++||+|||+.+..+.++.+++.+...+.++.+.+++.+++.|++.+...+...+++.+
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 338 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVY 338 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHH
Confidence 45677778888899999999999999999999999998888888888888888989999999999999999999999999
Q ss_pred cCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 224 TCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 224 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
..++++|++.+++......+|..+||.+++.+.+.. ||++.|++.+++.++..+..++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 339 NSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY-GFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred hCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-chhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998887 8999999999888877665543
No 153
>PRK10504 putative transporter; Provisional
Probab=99.37 E-value=1.7e-11 Score=124.57 Aligned_cols=168 Identities=18% Similarity=0.108 Sum_probs=127.9
Q ss_pred HHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHh
Q 008615 370 FQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKI 449 (559)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (559)
+........+..+.|.+.++.|.+. .+.++......++..++.++.|+++||+|||+.+..+..+.+++.+.....
T Consensus 20 ~~~~~~~~~~~~~~p~~~~~~g~s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~--- 95 (471)
T PRK10504 20 FMQSLDTTIVNTALPSMAQSLGESP-LHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALS--- 95 (471)
T ss_pred HHHHHhHHHHHHHHHHHHHHhCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHh---
Confidence 3333344456778899999999887 777888888888989999999999999999999988877777766554421
Q ss_pred hcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHH
Q 008615 450 LGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAA 529 (559)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~ 529 (559)
.+.+ .+....++.+.......+....++.|.+|+++|+++.|+.+....+|..++|.+.|.+.+..||++.|.+...
T Consensus 96 --~~~~-~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~ 172 (471)
T PRK10504 96 --GTLN-ELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIP 172 (471)
T ss_pred --CCHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHH
Confidence 2222 2333334444444444556667788999999999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHhhccC
Q 008615 530 IAFLAVLFIVRTVPE 544 (559)
Q Consensus 530 ~~~~~~~~~~~~~~~ 544 (559)
+..++.++.....++
T Consensus 173 ~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 173 VGIIGAIATLMLMPN 187 (471)
T ss_pred HHHHHHHHHHHhCCC
Confidence 777666665555554
No 154
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.37 E-value=9.6e-12 Score=125.96 Aligned_cols=144 Identities=17% Similarity=0.056 Sum_probs=112.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHH--HHhchhHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALT--TAYAPGLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~--~~~~~~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+|++..+.++..+.+.++..++.+++|+++||+|||+.++....+..++..+ ....++.+.+.+.+++.|++......
T Consensus 289 ~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 368 (467)
T PRK09556 289 LGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQL 368 (467)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHH
Confidence 7999999999999999999999999999999999998876655444433322 23345666777888888865443333
Q ss_pred hhhhhhhccCCcccchhhhhHHHHHHHH-HHHHHHHhhhcccC------------CCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 216 GAPLYIAETCPSQIRGTLISLKELFIVL-GILLGYFVGSFQIN------------AVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~------------~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
.....+.|.+|++.|+.+.|+.+....+ |..++|.+.|.+.+ .. +|+..|++.+++.++..+..++
T Consensus 369 ~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~-~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 369 LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLT-GWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccccccccccccc-ChHHHHHHHHHHHHHHHHHHHH
Confidence 3345677999999999999999988886 77999999999988 44 7999999987777776655543
No 155
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.36 E-value=2.6e-11 Score=120.89 Aligned_cols=179 Identities=14% Similarity=0.080 Sum_probs=129.3
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
++......+.++.............+.+.++.+.+. .+.++......++..++.++.|++.||+|||+.+..+.++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~-~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~ 89 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTT-VDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSA 89 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 344444444445444445556667788888888887 7889999999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL 518 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 518 (559)
+.++..+. . ++..+....+..+.......+...+++.|.+|+++|+++.++.+....+|..+++.+.+.+.+..
T Consensus 90 ~~~~~~~~-----~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~ 163 (405)
T TIGR00891 90 GTLACGFA-----P-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW 163 (405)
T ss_pred HHHHHHHh-----c-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77666542 2 22233333344444434444555678889999999999999999999999999999999998877
Q ss_pred C--chhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 519 G--AENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 519 g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
+ |+..|++.++..++. ++.....||.
T Consensus 164 ~~~w~~~f~~~~~~~~~~-~~~~~~~~~~ 191 (405)
T TIGR00891 164 GDGWRALFFISILPIIFA-LWLRKNIPEA 191 (405)
T ss_pred CccHHHHHHHHHHHHHHH-HHHHHhCCCC
Confidence 6 777777654444433 3333445554
No 156
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.36 E-value=5.2e-12 Score=127.07 Aligned_cols=141 Identities=14% Similarity=0.182 Sum_probs=120.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh--hchHHHHH--HHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF--LGRKRELI--IAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr--~Grr~~~~--~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 213 (559)
+|.+..+.+++.++..++..++.++.|+++|| +++|+... .+.++.+++.+++.+.++++.+++.+++.|++.+..
T Consensus 271 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~ 350 (455)
T TIGR00892 271 KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSV 350 (455)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchH
Confidence 78899999999999999999999999999997 34444333 344444555666777889999999999999999999
Q ss_pred hhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHH
Q 008615 214 MHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGI 278 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~ 278 (559)
.+...+++.|.+|++++++.+++++....+|.++||.+++.+.+..++|++.|++.+++.++..+
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 351 GALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999988765699999998887766544
No 157
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.36 E-value=2e-11 Score=119.81 Aligned_cols=161 Identities=17% Similarity=0.038 Sum_probs=122.8
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
......|.+..+.+.+. .+.++......++.+++.++.|+++||+|||+.+..+.++..++.+++........ .+...
T Consensus 17 ~~~~~~~~~~~~~~~s~-~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 94 (365)
T TIGR00900 17 ITQVALPLYVLAGTGSA-SVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGG-LNIWQ 94 (365)
T ss_pred HHHHHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCC-CcHHH
Confidence 35556677777877776 78899999999999999999999999999999999888877777666654332111 12333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
+....+..+.......+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..||+..+++.++..+++.++
T Consensus 95 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~ 174 (365)
T TIGR00900 95 VYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALL 174 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 33333344444444455666889999999999999999999999999999999999999999999888877766665554
Q ss_pred HHh
Q 008615 538 IVR 540 (559)
Q Consensus 538 ~~~ 540 (559)
.+.
T Consensus 175 ~~~ 177 (365)
T TIGR00900 175 IVS 177 (365)
T ss_pred HHh
Confidence 443
No 158
>PRK03699 putative transporter; Provisional
Probab=99.36 E-value=2.9e-11 Score=119.71 Aligned_cols=157 Identities=10% Similarity=0.044 Sum_probs=117.2
Q ss_pred hhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchh
Q 008615 376 QPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPL 455 (559)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (559)
...+....|.+.++.+.+. .+.++......++..++.++.|++.||+|||+.+..+.++.+++.++.... ++.+
T Consensus 23 ~~~~g~~~~~i~~~~~~s~-~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~-----~~~~ 96 (394)
T PRK03699 23 VIVTGMVMGPIAEYFNLPV-SSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFS-----HSLA 96 (394)
T ss_pred HHHHhhhhHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-----chHH
Confidence 3456667788888888887 788899999999999999999999999999999998888877777666542 2223
Q ss_pred HHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH-hcCchhhHHHHHHHHHHH
Q 008615 456 VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE-LLGAENIFLLFAAIAFLA 534 (559)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~-~~g~~~~~~~~~~~~~~~ 534 (559)
..+ ...+..+.......+....++.|.+|+++|+.+.++.+....+++.++|.+.+.+.+ ..||++.|.+.+++.++.
T Consensus 97 ~~~-~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~ 175 (394)
T PRK03699 97 LFS-IAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAI 175 (394)
T ss_pred HHH-HHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 222 222333333333334445778899999999999999888888888999999888775 468999998877776655
Q ss_pred HHHHH
Q 008615 535 VLFIV 539 (559)
Q Consensus 535 ~~~~~ 539 (559)
.++.+
T Consensus 176 ~~~~~ 180 (394)
T PRK03699 176 FILTL 180 (394)
T ss_pred HHHHH
Confidence 54433
No 159
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.36 E-value=2.5e-11 Score=120.83 Aligned_cols=181 Identities=18% Similarity=0.178 Sum_probs=129.7
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+...+...+..+........+....+.+.++++.+. .+.+.......++..++.++.|+++||+|||+.+..+..+.++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~ 90 (406)
T PRK15402 12 LLFPLCLVLFEFATYIANDMIQPGMLAVVEDFNAGA-EWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFIL 90 (406)
T ss_pred HHHHHHHHHHHHHHHhhhhhHhcchHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 334444444444333333344445677778888887 7888888899999999999999999999999999988877777
Q ss_pred HHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc
Q 008615 439 SLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL 518 (559)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~ 518 (559)
+.+..... .+.+ .+....++.+.......+....++.|.+|++.++++.++......++..++|.+.+.+.+..
T Consensus 91 ~~~~~~~~-----~~~~-~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 91 TCLAILLA-----QSIE-QFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred HHHHHHHH-----ccHH-HHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 76665432 2222 22233333333333333455577789999999999999988888889999999999999988
Q ss_pred CchhhHHHHHHHHHHHHHHHHhhccCCC
Q 008615 519 GAENIFLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 519 g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
||++.+++.+++.+++.+..++..||++
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9999999888887777766666666654
No 160
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.35 E-value=2.7e-11 Score=120.36 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=119.8
Q ss_pred hHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHH
Q 008615 382 YAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSAL 461 (559)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (559)
-+|.+.++++.+. ...+.....+.++..++.++.|+++||+|||+++..+..+.+++.++.... . +...+...
T Consensus 38 ~l~~i~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a-----~-~~~~l~~~ 110 (413)
T PRK15403 38 GIINVVRDFNADV-SLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFT-----T-SMTQFLIA 110 (413)
T ss_pred CHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHc-----C-CHHHHHHH
Confidence 3445666778776 778888888889999999999999999999999998888777776665531 2 22223333
Q ss_pred HHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhh
Q 008615 462 LLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 541 (559)
-++.+.......+....+..|.+|++++++++++.+....++..++|.+.+.+.+..||++.|++.+++.++..++.++.
T Consensus 111 r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~ 190 (413)
T PRK15403 111 RFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLA 190 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333332233344456788999999999999999999999999999999999988899999999888877777665666
Q ss_pred ccCCC
Q 008615 542 VPETK 546 (559)
Q Consensus 542 ~~~~~ 546 (559)
.||++
T Consensus 191 lp~~~ 195 (413)
T PRK15403 191 MPETV 195 (413)
T ss_pred CCCCc
Confidence 67654
No 161
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.35 E-value=5.5e-11 Score=120.37 Aligned_cols=159 Identities=9% Similarity=-0.004 Sum_probs=113.3
Q ss_pred hhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 377 PSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
.....+.|.+.++++.+. .+.+.......++..++.++.|+++||+|||+.+..+.++.+++.++.... .+.+.
T Consensus 53 ~~~~~~~~~l~~~~gls~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~-----~s~~~ 126 (476)
T PLN00028 53 FAAAPLLPIIRDNLNLTK-SDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLV-----SSATG 126 (476)
T ss_pred HHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHh-----cCHHH
Confidence 345556778888899887 778888888888999999999999999999999888887777766655542 22222
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH---------hcCchhhHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE---------LLGAENIFLLF 527 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~---------~~g~~~~~~~~ 527 (559)
+....++.++......+. ..++.|.+|+++|++++|+.+....+|..+++.+.+.+.. ..||++.|++.
T Consensus 127 -l~~~r~l~G~~~~~~~~~-~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~ 204 (476)
T PLN00028 127 -FIAVRFFIGFSLATFVSC-QYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVP 204 (476)
T ss_pred -HHHHHHHHHHHHHhhHHH-HHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHH
Confidence 222223333333333333 3467899999999999999998888888877776655432 14799999998
Q ss_pred HHHHHHHHHHHHhhcc
Q 008615 528 AAIAFLAVLFIVRTVP 543 (559)
Q Consensus 528 ~~~~~~~~~~~~~~~~ 543 (559)
+++.++..++.+++.+
T Consensus 205 g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 205 GLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 8887777665555543
No 162
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.35 E-value=3.2e-11 Score=119.57 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=120.2
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
.....|.+.++.+.++ .+.++......++..++.++.|+++||+|||+.+..+.++..++.+..... .+.+ .+
T Consensus 27 ~~p~~~~i~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~-----~~~~-~l 99 (394)
T PRK11652 27 YVPAIADMARDLNVRE-GAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFA-----HSLT-VL 99 (394)
T ss_pred HhccHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHH-----ccHH-HH
Confidence 3445677888888887 788999999999999999999999999999999998888777776665431 2222 22
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 538 (559)
....++.+.......+....+..|.++.+.++.+.++.+....++..++|.+.+.+.+..||+..|.+.+++.++..++.
T Consensus 100 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~ 179 (394)
T PRK11652 100 IAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSM 179 (394)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHH
Confidence 23333333332223344446677888888999999999999999999999999999998899999988877766655555
Q ss_pred HhhccCCC
Q 008615 539 VRTVPETK 546 (559)
Q Consensus 539 ~~~~~~~~ 546 (559)
.++.||++
T Consensus 180 ~~~~~~~~ 187 (394)
T PRK11652 180 ARWMPETR 187 (394)
T ss_pred HHhCCccC
Confidence 55566643
No 163
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.34 E-value=6.6e-12 Score=122.57 Aligned_cols=159 Identities=19% Similarity=0.177 Sum_probs=124.4
Q ss_pred hHHHhHH-HHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 378 SVLYYAG-PILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 378 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
......| .+.++.+.+. .+.++......++..++.++.|+++||+|||+.+..+.++.+++.++..+. .+.+
T Consensus 14 ~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~-----~~~~- 86 (352)
T PF07690_consen 14 IISPALPLYLAEELGLSP-SQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA-----SNFW- 86 (352)
T ss_dssp HHHHHHH-HHHCCSTTTS-HCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH-----CCHH-
T ss_pred HHHHHHHHHHHHccCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh-----hhHH-
Confidence 3455556 5566777777 789999999999999999999999999999999999988888884444421 3334
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
.+....+..+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..||+..|++.+++.++..+
T Consensus 87 ~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 87 LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 44444445555545556667788999999999999999999999999999999999999888999999999988888877
Q ss_pred HHHhhcc
Q 008615 537 FIVRTVP 543 (559)
Q Consensus 537 ~~~~~~~ 543 (559)
+...+.+
T Consensus 167 l~~~~~~ 173 (352)
T PF07690_consen 167 LFILFLP 173 (352)
T ss_dssp HHHCCC-
T ss_pred hHhhhhh
Confidence 5444443
No 164
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.34 E-value=1.8e-11 Score=120.63 Aligned_cols=142 Identities=14% Similarity=0.134 Sum_probs=120.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.|.+..+.+++.+.+.++..+++++.|++.||+|+|+++..+.++.+++.+... +...++...++.|++.....|..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~p~~ 306 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML---SQAAMAPALFILGAAGFTLYPVA 306 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhHHHHH
Confidence 678889999999999999999999999999999999999988888877665443 22344557788888877788999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhcc
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSL 283 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 283 (559)
.+++.|..|+++++.+.+.+....++|.++||.++|++.+.. +|++.|++.+.+.++..+..+..
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 307 MAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-SDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccHHHHHHHHHHHHHHHHHHhc
Confidence 999999998888888888888899999999999999998887 89999999888887666555543
No 165
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.33 E-value=4.6e-11 Score=118.23 Aligned_cols=159 Identities=17% Similarity=0.127 Sum_probs=120.7
Q ss_pred HHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 379 VLYYAGPIL-QSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 379 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
+..+.+.++ ++.|.+. ...++......+...+..++.|+++||+|||+.+..+.++.+++++.+... ++.+..
T Consensus 29 ~~~~~~~~~~~~~g~s~-~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~-----~~~~~l 102 (400)
T PRK11646 29 VFPLISIRFVDQLGWAA-VMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIA-----HEPWLL 102 (400)
T ss_pred HHHHHHHHHHHHhCCcH-HHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHh-----ccHHHH
Confidence 444555554 5678877 889999999899999999999999999999999999999888887776542 223333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
+ ...+..+.......+...+++.+.+|+++|++++|+.+....+|..++|.+.+.+. ..||++.|++.+++.++..++
T Consensus 103 ~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~ 180 (400)
T PRK11646 103 W-LSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAF 180 (400)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHH
Confidence 3 33333333333344555577889999999999999999999999999999999998 679999898887777666655
Q ss_pred HHhhccCC
Q 008615 538 IVRTVPET 545 (559)
Q Consensus 538 ~~~~~~~~ 545 (559)
.....++.
T Consensus 181 ~~~~~~~~ 188 (400)
T PRK11646 181 NAWLLPAY 188 (400)
T ss_pred HHHhCCcc
Confidence 55555543
No 166
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.33 E-value=4.9e-11 Score=118.35 Aligned_cols=158 Identities=16% Similarity=0.091 Sum_probs=115.9
Q ss_pred ChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcchhhhhHHHHHHHHHHHHHHHHhhcC
Q 008615 375 GQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL-GRRPLLIGGVCGIALSLLLLSAYYKILGG 452 (559)
Q Consensus 375 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (559)
.++.+..++|.++.+ .|++. .+++...........++.+++|+++||+ |||+.+.++.++..++.+++... ..
T Consensus 24 s~Yg~~~~L~~yL~~~lgls~-~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~----~~ 98 (493)
T PRK15462 24 SFYGMRALLILYLTNQLKYDD-NHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGAS----EI 98 (493)
T ss_pred HHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHh----hc
Confidence 344577788888765 57776 7888888888889899999999999999 99999999998888887655421 11
Q ss_pred chhHHHHHHHHHHHHhhcccccccceeecccCCcc--chhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHH
Q 008615 453 FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLR--TRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAI 530 (559)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~ 530 (559)
..........+.. .......+...++..|.+|++ .|.++.++.+...++|+.++|.+.+.+.+..||+..|.+.++.
T Consensus 99 ~~~~~~l~l~li~-iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig 177 (493)
T PRK15462 99 HPSFLYLSLAIIV-CGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG 177 (493)
T ss_pred chhHHHHHHHHHH-HhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH
Confidence 1121222222221 222233344457889999875 6999999999999999999999999999999999999887665
Q ss_pred HHHHHHHH
Q 008615 531 AFLAVLFI 538 (559)
Q Consensus 531 ~~~~~~~~ 538 (559)
.+++.+..
T Consensus 178 m~l~li~~ 185 (493)
T PRK15462 178 MIAGLVIF 185 (493)
T ss_pred HHHHHHHH
Confidence 55544433
No 167
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.32 E-value=5.6e-11 Score=119.87 Aligned_cols=157 Identities=17% Similarity=0.079 Sum_probs=119.9
Q ss_pred hChhhHHHhHHHHHHH---cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhhhhHHHHHHHHHHHHHHHHh
Q 008615 374 TGQPSVLYYAGPILQS---AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD-LGRRPLLIGGVCGIALSLLLLSAYYKI 449 (559)
Q Consensus 374 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (559)
.+++.+..+++.|+.+ +|.+. .+++.......++..++.+++|+++|| +|||+++..+.++.+++.+++...
T Consensus 24 ~~~~~~~~~L~~yl~~~~~lg~s~-~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~--- 99 (475)
T TIGR00924 24 FSYYGMQGILAVYLVQQAGLGFSQ-EQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMS--- 99 (475)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhc---
Confidence 3444577788888875 57776 789999999999999999999999999 899999999999988887776641
Q ss_pred hcCchhHHHHHHHHHHHHhhcccccccceeecccCCccc---hhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHH
Q 008615 450 LGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRT---RGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLL 526 (559)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 526 (559)
.+.+.... ...+.+.......+...++..+.+|++. |+++.++.+...++|.+++|.+.+.+.+..||+..|.+
T Consensus 100 --~~~~~~~~-~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~ 176 (475)
T TIGR00924 100 --IYPDLIFY-GLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNL 176 (475)
T ss_pred --ccHhHHHH-HHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 22222222 2223334444445555677888887654 88899999999999999999999999999999999988
Q ss_pred HHHHHHHHHHH
Q 008615 527 FAAIAFLAVLF 537 (559)
Q Consensus 527 ~~~~~~~~~~~ 537 (559)
.++..+++.++
T Consensus 177 ~~~~~~~~~l~ 187 (475)
T TIGR00924 177 AAVGMVIGLLT 187 (475)
T ss_pred HHHHHHHHHHH
Confidence 77665555443
No 168
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.3e-12 Score=121.18 Aligned_cols=187 Identities=14% Similarity=0.075 Sum_probs=149.0
Q ss_pred HHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHH
Q 008615 360 AFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALS 439 (559)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 439 (559)
..++...+....+.+--+.+..-.+..-+.++.++ ...|++.....++..+.+++.|++.||++|++++.+|..+-.++
T Consensus 33 ~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~-s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~A 111 (493)
T KOG1330|consen 33 LTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISD-SELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLA 111 (493)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCc-hhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHH
Confidence 34444444444444444445544555555567777 78899999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Q 008615 440 LLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG 519 (559)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 519 (559)
.+.-++. ..++.+...-.+.+.+-..+.|+..++++|.+|.++|++++++.++...+|..+|-.+.+.+.+..+
T Consensus 112 v~~~~fs------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~ 185 (493)
T KOG1330|consen 112 VFASGFS------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF 185 (493)
T ss_pred HHHHHHH------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc
Confidence 8877753 3455566666667777777888888999999999999999999999999999888888888877777
Q ss_pred -chhhHHHHHHHHHHHHHHHHhhccCCCCCCHHHH
Q 008615 520 -AENIFLLFAAIAFLAVLFIVRTVPETKGLSLEEI 553 (559)
Q Consensus 520 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (559)
|++.|.+.+++.++.+++..++.+|++++..+|.
T Consensus 186 ~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~ 220 (493)
T KOG1330|consen 186 WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEV 220 (493)
T ss_pred ceEEEEEeehHHHHHHHHHHHhhccCccccccccc
Confidence 9999999999999999988888888776544443
No 169
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.31 E-value=8.9e-12 Score=123.68 Aligned_cols=138 Identities=27% Similarity=0.216 Sum_probs=112.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHH--HHHHh--chhHhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGA--LTTAY--APGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~--~~~~~--~~~~~~l~~~r~l~G~~~g~~ 213 (559)
+|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..+.. ++..+ .++.+.+++..++.|++.+..
T Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 329 (394)
T TIGR00883 250 LGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMY 329 (394)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 78889999999999999999999999999999999998876555444433 22222 246677778889999999889
Q ss_pred hhhhhhhhhccCCcccchhhhhH-HHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHH
Q 008615 214 MHGAPLYIAETCPSQIRGTLISL-KELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALL 275 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 275 (559)
.+...+++.|.+|+++|++++++ ......+|..++|.+++.+.+..+.|++.++..+...++
T Consensus 330 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l~ 392 (394)
T TIGR00883 330 TGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALALI 392 (394)
T ss_pred hhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHHH
Confidence 99999999999999999999998 456667899999999999988873498887776665543
No 170
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.31 E-value=4.3e-11 Score=116.45 Aligned_cols=161 Identities=14% Similarity=0.045 Sum_probs=118.6
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
.+....|.+.++.+.+. .+.++......++..++.+..|++.||+|||+++.........+..... . ..++..
T Consensus 9 ~~~~~lp~i~~~~~~s~-~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~-----~-~~~~~~ 81 (368)
T TIGR00903 9 TFSPVLSLVAEDIDVSK-EELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLL-----D-PFNYEW 81 (368)
T ss_pred HHHhhHHHHHHHhCcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHH-----H-hccHHH
Confidence 45567788888899887 7889999999999999999999999999988876554443333321111 0 112333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
+...-+..+....... .......|.+|+++|++++++.+....+|..+++.+.+.+.+..||+..|++.+++.++..++
T Consensus 82 l~~~R~l~G~g~~~~~-~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~ 160 (368)
T TIGR00903 82 LLACQLLAALGQPFLL-NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIIL 160 (368)
T ss_pred HHHHHHHHHhHhHHHH-HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 3333333333332222 223455788999999999999999999999999999999999999999999988888887777
Q ss_pred HHhhccCCC
Q 008615 538 IVRTVPETK 546 (559)
Q Consensus 538 ~~~~~~~~~ 546 (559)
.++.+||..
T Consensus 161 ~~~~lp~~p 169 (368)
T TIGR00903 161 VLAALPALP 169 (368)
T ss_pred HHHHcCCCC
Confidence 777777754
No 171
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.31 E-value=1.1e-11 Score=122.26 Aligned_cols=161 Identities=16% Similarity=0.127 Sum_probs=125.5
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
.+....|.+.++.+.+. .+.+++.....++..++.++.|+++||+|||+.+..+.++.+++.+++... . ....
T Consensus 13 ~~~~~~~~~~~~~g~s~-~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~-~~~~ 85 (379)
T TIGR00881 13 NFALAMPYLVEEIGLSK-TDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFS-----T-SLWV 85 (379)
T ss_pred hhhhhhHHHHHHhCCCH-hHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHh-----h-hHHH
Confidence 45666777888888887 789999999999999999999999999999999999988888887776643 2 2333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHH-hhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTF-AFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~-i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
+....++.+.......+...+++.|.+|+++|+++.++.+....+|..+++. +.+.+.+..+|+..|++.+++.++..+
T Consensus 86 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (379)
T TIGR00881 86 MAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSL 165 (379)
T ss_pred HHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHH
Confidence 3334444444444555666688999999999999999999999999999994 666666777898888888877776666
Q ss_pred HHHhhccCC
Q 008615 537 FIVRTVPET 545 (559)
Q Consensus 537 ~~~~~~~~~ 545 (559)
+.+++.++.
T Consensus 166 ~~~~~~~~~ 174 (379)
T TIGR00881 166 ICFLLLRDS 174 (379)
T ss_pred HHheeeCCC
Confidence 566555543
No 172
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.30 E-value=5.5e-11 Score=119.29 Aligned_cols=155 Identities=13% Similarity=0.082 Sum_probs=117.9
Q ss_pred HHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHH
Q 008615 367 LVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAY 446 (559)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (559)
+.++.............|.+.++.+.++ .+.++......++..++.++.|++.||+|||+.+..+.++.+++.++..+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~-~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 103 (426)
T PRK12307 25 LGYVFDGFDFMLIFYIMYLIKADLGLTD-MEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLA 103 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 3333333334455666677778888887 788899999999999999999999999999999999998888887766643
Q ss_pred HHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHH
Q 008615 447 YKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLL 526 (559)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~ 526 (559)
. +...+...-++.+.......+....++.|.+|+++|+++.++......+|..+++.+.+.+.+..||++.|++
T Consensus 104 -----~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i 177 (426)
T PRK12307 104 -----S-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFV 177 (426)
T ss_pred -----h-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHH
Confidence 1 2223333333444433344455567888999999999999999999999999999999988888899988876
Q ss_pred HH
Q 008615 527 FA 528 (559)
Q Consensus 527 ~~ 528 (559)
..
T Consensus 178 ~~ 179 (426)
T PRK12307 178 GL 179 (426)
T ss_pred HH
Confidence 44
No 173
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.30 E-value=3.5e-11 Score=118.61 Aligned_cols=160 Identities=18% Similarity=0.140 Sum_probs=125.4
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
.....|.+.++.+.++ .+.++......++..++.++.|++.||+|||+.+..+.++.+++...+... .+.+. +
T Consensus 10 ~~p~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~-----~~~~~-~ 82 (377)
T PRK11102 10 YLPALPVIAADFGVSA-GSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALA-----QTIDQ-L 82 (377)
T ss_pred HhccHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHH-----ccHHH-H
Confidence 4456677788888887 788999999999999999999999999999999999888888877776542 22222 2
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 538 (559)
....+..+.......+....++.|.+|+++|++++++.+....+|..++|.+.+.+.+..||+..|++.+++.++..++.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 162 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALV 162 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 23333333333334445557888999999999999999999999999999999999999999999988888877776666
Q ss_pred HhhccCC
Q 008615 539 VRTVPET 545 (559)
Q Consensus 539 ~~~~~~~ 545 (559)
.+..+|+
T Consensus 163 ~~~~~~~ 169 (377)
T PRK11102 163 FFFIPET 169 (377)
T ss_pred HHhCCcc
Confidence 6666654
No 174
>PRK11043 putative transporter; Provisional
Probab=99.30 E-value=1.2e-10 Score=115.83 Aligned_cols=155 Identities=19% Similarity=0.104 Sum_probs=114.4
Q ss_pred hHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHH
Q 008615 382 YAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSAL 461 (559)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (559)
..|.+.++.+.++ .+.++......++..++.++.|+++||+|||+.+..+..+..++.++.... .+.+. +...
T Consensus 28 ~~~~i~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~-----~~~~~-l~~~ 100 (401)
T PRK11043 28 AFKAIQADLQTSA-SAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWV-----ESAAQ-LLVL 100 (401)
T ss_pred hHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHh-----cCHHH-HHHH
Confidence 3455567788877 889999999999999999999999999999999998887777766655431 22222 2222
Q ss_pred HHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhh
Q 008615 462 LLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRT 541 (559)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 541 (559)
.++.+.......+....+..|.+|+++++...+..+....++..++|.+.+.+.+..||+..|++.+++.++..++.+..
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHc
Confidence 22322222222333346678889988899999998888899999999999999999999999988887777666555444
Q ss_pred cc
Q 008615 542 VP 543 (559)
Q Consensus 542 ~~ 543 (559)
.+
T Consensus 181 ~~ 182 (401)
T PRK11043 181 KP 182 (401)
T ss_pred CC
Confidence 33
No 175
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.29 E-value=6.6e-11 Score=121.26 Aligned_cols=158 Identities=12% Similarity=0.020 Sum_probs=119.0
Q ss_pred HHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHH
Q 008615 365 GGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLS 444 (559)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 444 (559)
..+..+.............|.+.++++.+. .+.+.......++..++.++.|++.||+|||+.+..+.++.+++.+++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~ 103 (496)
T PRK03893 25 AWLGYLLDGFDFVLITLVLTEVQGEFGLTT-VQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACG 103 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 333333333333455566788888888887 7788888889999999999999999999999999988888888777666
Q ss_pred HHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhH
Q 008615 445 AYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIF 524 (559)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~ 524 (559)
.. . +...+....++.++......+....++.|.+|+++|+.+.++......+|..+++.+.+.+.+..||++.|
T Consensus 104 ~~-----~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f 177 (496)
T PRK03893 104 FA-----P-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALF 177 (496)
T ss_pred HH-----h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence 42 2 22233333344444434444555578899999999999999999999999999999999999999998888
Q ss_pred HHHHH
Q 008615 525 LLFAA 529 (559)
Q Consensus 525 ~~~~~ 529 (559)
++.++
T Consensus 178 ~~~~~ 182 (496)
T PRK03893 178 FIGIL 182 (496)
T ss_pred HHHHH
Confidence 76433
No 176
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.29 E-value=6.8e-11 Score=117.37 Aligned_cols=163 Identities=10% Similarity=0.031 Sum_probs=110.4
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
....+.+.++++.+.+. .+.++......++..++.++.|++.||+|||+.+..+..+.+++.++..... . ....+..
T Consensus 31 ~~~~~~~~~~~~~g~s~-~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~-~-~~~~~~~ 107 (402)
T TIGR00897 31 LEQGWLSPFLKALGLSP-QQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFG-L-GHANYPL 107 (402)
T ss_pred hHHHhHHHHHHHhCCCH-HHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh-c-cCccHHH
Confidence 34556777888888887 8899999999999999999999999999999999998888877755443211 1 1112222
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHH-HHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSN-AIVTFAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
+....+..+.......+.......+.+|+++|++++|+.+....+|. .++|.+.+.+.+..|+...++....+.++..+
T Consensus 108 l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 187 (402)
T TIGR00897 108 ILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGV 187 (402)
T ss_pred HHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHH
Confidence 22222222222222223333556788899999999999999988886 57888888888888865555544333333333
Q ss_pred HHHhhcc
Q 008615 537 FIVRTVP 543 (559)
Q Consensus 537 ~~~~~~~ 543 (559)
+.+++.+
T Consensus 188 ~~~~~~~ 194 (402)
T TIGR00897 188 IALFSNK 194 (402)
T ss_pred HHHhccC
Confidence 3334333
No 177
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.27 E-value=1.4e-10 Score=116.97 Aligned_cols=163 Identities=17% Similarity=0.108 Sum_probs=112.8
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
+....|.+.++ +.+. .+.++......++..++.++.|+++||+|||+++..+.++.+++.+++.+... .......+
T Consensus 48 ~~~~~p~l~~~-g~s~-~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~--~~~~~~~~ 123 (452)
T PRK11273 48 FALAMPYLVEQ-GFSR-GDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPW--ATSSIAVM 123 (452)
T ss_pred HHHhhHHHHHc-CCCH-HHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhc--ccccHHHH
Confidence 44566766655 7776 88999999999999999999999999999999999998888877776654311 11122222
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh-HHHHHhcCchhhHHHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF-SPLKELLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~-g~l~~~~g~~~~~~~~~~~~~~~~~~ 537 (559)
....++.+.+.....+.....+.+.+|+++|++++|+.+....+|+.+.+++. ..+....||+..|++.+++.++..++
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 23223333333333343335677889999999999999988888865444443 33333458888998888777776666
Q ss_pred HHhhccCC
Q 008615 538 IVRTVPET 545 (559)
Q Consensus 538 ~~~~~~~~ 545 (559)
.+++.+|+
T Consensus 204 ~~~~~~~~ 211 (452)
T PRK11273 204 AFAMMRDT 211 (452)
T ss_pred HHHHccCC
Confidence 66666654
No 178
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.27 E-value=5.3e-11 Score=119.56 Aligned_cols=163 Identities=16% Similarity=0.076 Sum_probs=116.6
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
+....|.+. +.|.+. .+.++......++..++.++.|++.||+|||+.+..+.++.+++.+++..... .......+
T Consensus 46 ~~~~~p~~~-~~g~s~-~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l 121 (438)
T TIGR00712 46 FALAMPYLV-EQGFSK-GELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPW--ATSSIAIM 121 (438)
T ss_pred HHhhhHHHH-HcCCCH-hHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccc--ccchHHHH
Confidence 444556555 467776 78999999999999999999999999999999998888777777666543210 01122222
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH-hcCchhhHHHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE-LLGAENIFLLFAAIAFLAVLF 537 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~-~~g~~~~~~~~~~~~~~~~~~ 537 (559)
....+..+.......+.....+.|.+|+++|++++|+.+....+++.+++.+.+...+ ..||+..|++.+++.++..++
T Consensus 122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~ 201 (438)
T TIGR00712 122 FVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALF 201 (438)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 2222233333333333344677789999999999999999999999999988876554 468999999888887777666
Q ss_pred HHhhccCC
Q 008615 538 IVRTVPET 545 (559)
Q Consensus 538 ~~~~~~~~ 545 (559)
.+++.+|.
T Consensus 202 ~~~~~~~~ 209 (438)
T TIGR00712 202 AFAMMRDT 209 (438)
T ss_pred HHHhccCC
Confidence 66666553
No 179
>PRK09952 shikimate transporter; Provisional
Probab=99.27 E-value=6.5e-11 Score=118.71 Aligned_cols=149 Identities=14% Similarity=0.061 Sum_probs=113.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh---c-hhHhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY---A-PGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~---~-~~~~~l~~~r~l~G~~~g~~ 213 (559)
+|.+......+.....+...++.+++|+++||+|||++++.+.++..++.+.+.. . ++.+.+++..++.|++.+..
T Consensus 281 ~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (438)
T PRK09952 281 LGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMV 360 (438)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 6777776666666667777889999999999999999998887766555443322 2 23444555667778888888
Q ss_pred hhhhhhhhhccCCcccchhhhhHHHH-HHHHHHHHHHHhhhcccCCC-CcchHHHhhhHHHHHHHHHHhhccCCc
Q 008615 214 MHGAPLYIAETCPSQIRGTLISLKEL-FIVLGILLGYFVGSFQINAV-GGWRYMYGLSAPLALLMGIGMWSLPPS 286 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~e~ 286 (559)
.+...+++.|.+|.+.|+.+.++... +..+|..++|.+.+++.+.. ++|+..+...+++.++..+..+.++|+
T Consensus 361 ~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 435 (438)
T PRK09952 361 VCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKDN 435 (438)
T ss_pred HHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHcccc
Confidence 88889999999999999988888544 45589999999999987743 258988888888888777776666653
No 180
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.26 E-value=5.3e-11 Score=121.52 Aligned_cols=149 Identities=17% Similarity=0.047 Sum_probs=118.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh-----ch------hHhHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY-----AP------GLGVLLVGRLLY 206 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-----~~------~~~~l~~~r~l~ 206 (559)
+|.+..+.++......++..++.++.|+++||+|||+.+.++.++.+++.++.++ .+ +...+....++.
T Consensus 314 ~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (481)
T TIGR00879 314 AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFI 393 (481)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHH
Confidence 6788888899999999999999999999999999999999998888887777662 11 223333333333
Q ss_pred HhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhh-ccCC
Q 008615 207 GLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMW-SLPP 285 (559)
Q Consensus 207 G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e 285 (559)
+.......+....++.|.+|+++|++++++.....++|.++++.+.+.+.+.. +|++.|++.++++++..++.+ +.||
T Consensus 394 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-~~~~~f~~~~~~~~~~~i~~~~~~~~ 472 (481)
T TIGR00879 394 AFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-GVGGVFIFFGGLNVLGLIFVYFFLPE 472 (481)
T ss_pred HHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CccceehhHHHHHHHHHHHHheeccc
Confidence 33333344666777899999999999999999999999999999999988877 899999999988888766654 4565
Q ss_pred ch
Q 008615 286 SP 287 (559)
Q Consensus 286 ~p 287 (559)
++
T Consensus 473 ~~ 474 (481)
T TIGR00879 473 TK 474 (481)
T ss_pred CC
Confidence 43
No 181
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.26 E-value=1.4e-10 Score=114.37 Aligned_cols=140 Identities=18% Similarity=0.068 Sum_probs=120.8
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+++++++.+++..++.|++.+...+..
T Consensus 235 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~ 314 (382)
T PRK11128 235 AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAA 314 (382)
T ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999988888889999999999999999999988998
Q ss_pred hhhhhccCCcccchhhhhHHH-HHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh
Q 008615 218 PLYIAETCPSQIRGTLISLKE-LFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 280 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 280 (559)
..++.+. +++++++..++.. ...++|..+||.++|.+.+.. |+ ..|+..+++.++.+++.
T Consensus 315 ~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~-g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 315 MRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL-GA-GVFWVMALVALPALFIR 375 (382)
T ss_pred HHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cH-HHHHHHHHHHHHHHHHH
Confidence 8888886 5666788888876 556788899999999999887 76 46777776666554443
No 182
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.25 E-value=1.3e-10 Score=118.46 Aligned_cols=149 Identities=19% Similarity=0.178 Sum_probs=112.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch--h-Hh-HHHHHHHHHHhhhhh-
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP--G-LG-VLLVGRLLYGLGIGL- 212 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~-~~-~l~~~r~l~G~~~g~- 212 (559)
+|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++++... + .+ ....+.++.+++.+.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (479)
T PRK10077 301 LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMS 380 (479)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhcc
Confidence 677777777777788888999999999999999999999999999988887776432 2 11 223334444444443
Q ss_pred hhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc------cCCCCcchHHHhhhHHHHHHHHHHhh-ccCC
Q 008615 213 AMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ------INAVGGWRYMYGLSAPLALLMGIGMW-SLPP 285 (559)
Q Consensus 213 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l------~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~e 285 (559)
..+....++.|.+|+++|++++++......+|.++++.+.+.+ .+.. +|++.|++.++++++..++.+ +.||
T Consensus 381 ~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~e 459 (479)
T PRK10077 381 WGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHF-HNGFSYWIYGCMGVLAALFMWKFVPE 459 (479)
T ss_pred ccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhc-cCccHHHHHHHHHHHHHHHHHhcccc
Confidence 2367789999999999999999999999999998886555433 3455 889999998888777666554 4566
Q ss_pred ch
Q 008615 286 SP 287 (559)
Q Consensus 286 ~p 287 (559)
+.
T Consensus 460 ~~ 461 (479)
T PRK10077 460 TK 461 (479)
T ss_pred CC
Confidence 43
No 183
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.25 E-value=2.8e-10 Score=111.71 Aligned_cols=161 Identities=21% Similarity=0.167 Sum_probs=113.6
Q ss_pred hhHHHhHHH-HHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchh
Q 008615 377 PSVLYYAGP-ILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPL 455 (559)
Q Consensus 377 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (559)
.....+.|. +.++.+.+. .+.++......++..++.++.|+++||+|||+.+..+.++..++.+++.... .+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~----~~~~ 92 (366)
T TIGR00886 18 FAFSPLAVQMIKDDLGLST-AQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAV----QSYS 92 (366)
T ss_pred HHhHHhhhHHHHHHhCCCH-HHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHh----hhHH
Confidence 346667775 557788887 7899999999999999999999999999999999999888888877766421 0222
Q ss_pred HHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh----------cCchhhH-
Q 008615 456 VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL----------LGAENIF- 524 (559)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~----------~g~~~~~- 524 (559)
.+....+..+....... ....++.|.+|+++|+.+.++......+|..+++.+.+.+... .+|++.+
T Consensus 93 -~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~ 170 (366)
T TIGR00886 93 -VLLLLRLFIGIAGGSFA-SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFV 170 (366)
T ss_pred -HHHHHHHHHHHhchhhH-hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhH
Confidence 22223333333333333 3457788999999999999999988888888888877766653 3678887
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 008615 525 LLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~ 544 (559)
+..+++..+..++.+...++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 171 IVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred HHHHHHHHHHHHHHHHhccc
Confidence 44344444444444444443
No 184
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.25 E-value=9.6e-11 Score=115.82 Aligned_cols=148 Identities=21% Similarity=0.222 Sum_probs=119.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch-hHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP-GLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~-~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
.|.+..+.|.+.+.+.++..++.++.|++.||+|||+.+..+..+.+++.++....+ +...+ .-++.|++.+...+.
T Consensus 235 ~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~ 312 (393)
T PRK09705 235 IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPL 312 (393)
T ss_pred cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHH
Confidence 688999999999999999999999999999999999999998888777766554333 22222 234668888888887
Q ss_pred hhhhhhccCC-cccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh-hccCCch
Q 008615 217 APLYIAETCP-SQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM-WSLPPSP 287 (559)
Q Consensus 217 ~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~e~p 287 (559)
......+.++ ++++++..++.+....++..++|.+.+++.+..++|...|++.++.+++..+.. .+.||++
T Consensus 313 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 313 CLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 7777777775 578999999999999999999999999999887568888998888877766554 4566654
No 185
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.24 E-value=9.2e-11 Score=118.97 Aligned_cols=151 Identities=13% Similarity=-0.018 Sum_probs=118.4
Q ss_pred HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHh
Q 008615 389 SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCY 468 (559)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (559)
+.+.+. .+.+.+...+.++.+++.++.|++.||+|+|+.+..+.++.+++.++..... ......++..-++.+..
T Consensus 70 ~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~----~~~~~~l~~~r~~~G~~ 144 (465)
T TIGR00894 70 NFKWSG-ALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAA----GGGIALVVFCRVIQGLA 144 (465)
T ss_pred CCCCCH-HHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHH----HcCchHHHHHHHHHHHh
Confidence 345555 6788999999999999999999999999999999988887777766554321 12233344445555666
Q ss_pred hcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 469 QISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL-GAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 469 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
.....+....++.|.+|+++|++++|+.+....+|..+++.+.+.+.+.. ||+..|++.+++.++..++.+.+.++
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~ 221 (465)
T TIGR00894 145 QGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPAD 221 (465)
T ss_pred cccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcC
Confidence 66666777788999999999999999999999999999999999999984 99999999888777666655555543
No 186
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.24 E-value=1.1e-10 Score=115.89 Aligned_cols=141 Identities=14% Similarity=0.190 Sum_probs=122.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhh
Q 008615 139 NLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAP 218 (559)
Q Consensus 139 ~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 218 (559)
+.+....|++.++..+...++.++.|++.||+|||+.+.++.++.+++.++..++++.+.+++.++++|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667789999999999999999999999999999999999999999888878889999999999999999877766777
Q ss_pred hhhhccCCcccchhhhhH-HHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh
Q 008615 219 LYIAETCPSQIRGTLISL-KELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 280 (559)
Q Consensus 219 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 280 (559)
.++.+..+++.++...+. .+....+|..+++.++|++.+.. ||+..|++.+++.++..+..
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~-G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI-GFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-ccHHHHHHHHHHHHHHHHHH
Confidence 778888888877777666 67889999999999999999987 99999999888887765544
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.24 E-value=7.3e-11 Score=118.73 Aligned_cols=142 Identities=23% Similarity=0.351 Sum_probs=131.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|.++...|++.+++.+|..++.++.+++.+|+++++++..+.++++++.+..+++++.+..++..++.|++.....+..
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~ 328 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSL 328 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 280 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 280 (559)
.+.+.+..|++.|||+++++.+....+..+|..+.|.+.+.. |-+..+.+.++..++..++.
T Consensus 329 ~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~-g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 329 NTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF-GVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999888 89999888776655554443
No 188
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.22 E-value=3.7e-10 Score=111.55 Aligned_cols=174 Identities=14% Similarity=0.093 Sum_probs=122.0
Q ss_pred CchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHH
Q 008615 356 PNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCG 435 (559)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 435 (559)
|+++.++++.++..+... ......+.+..+.+.+. ...++....+.+...+..++.|+++||+|||+++..+.++
T Consensus 3 ~~f~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~s~-~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~ 77 (393)
T PRK11195 3 KGFYAIMAAQFFSALADN----ALLFAAIALLKELHYPD-WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGI 77 (393)
T ss_pred CcHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCcH-HHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHH
Confidence 445555555544444322 23344455567777766 6788999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHH
Q 008615 436 IALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLK 515 (559)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 515 (559)
.+++.+.+.... .. ....+..+.......|...+++.|.+|+++|++++|+.+....++..++|.+.|.+.
T Consensus 78 ~~~~~~~~~~~~------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 78 KLLGCLLMLFGI------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHHH------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877666544321 11 122233455555566777789999999999999999999999999999999999998
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 516 ELLGAENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 516 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
+.. +...+.+.+.+.+++. +..+.+||.
T Consensus 149 ~~~-~~~~~~i~~~~~~~~~-~~~~~l~~~ 176 (393)
T PRK11195 149 DPH-AEAALAVCALIYLLAA-LFNLFIPRL 176 (393)
T ss_pred HHH-HHHHHHHHHHHHHHHH-HHHhcCCCC
Confidence 864 4445544444433333 334455543
No 189
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.22 E-value=3.6e-10 Score=114.10 Aligned_cols=154 Identities=14% Similarity=0.054 Sum_probs=112.0
Q ss_pred hhhHHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhhhhHHHHHHHHHHHHHHHHhhcCc
Q 008615 376 QPSVLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD-LGRRPLLIGGVCGIALSLLLLSAYYKILGGF 453 (559)
Q Consensus 376 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (559)
++.+..+++.|++ ++|.+. .++......+.....+..+++|+++|| +|||+++..+.++..++.+.+.+. ..
T Consensus 30 ~y~~~~~l~~yl~~~lg~~~-~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~-----~~ 103 (489)
T PRK10207 30 YYGVQGILAVFFVKQLGFSQ-EQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMS-----LL 103 (489)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHh-----cc
Confidence 3445555566654 477776 667777777777777778899999999 999999999999999988777642 11
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeecccCCcc--chhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHH
Q 008615 454 PLVAVSALLLYVGCYQISFGPISWLMVSEIFPLR--TRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIA 531 (559)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~ 531 (559)
....+.......+.......|...+++.|.+|++ +|+.++++.....++|.+++|.+.|.+.++.||++.|++.++..
T Consensus 104 ~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~ 183 (489)
T PRK10207 104 KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGL 183 (489)
T ss_pred chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Confidence 1222222233334444455566668899999877 45778999999999999999999999999999999998865443
Q ss_pred HHHH
Q 008615 532 FLAV 535 (559)
Q Consensus 532 ~~~~ 535 (559)
+++.
T Consensus 184 ~~~~ 187 (489)
T PRK10207 184 IIAL 187 (489)
T ss_pred HHHH
Confidence 3333
No 190
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=6.2e-09 Score=100.85 Aligned_cols=316 Identities=15% Similarity=0.121 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcc
Q 008615 149 VSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQ 228 (559)
Q Consensus 149 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 228 (559)
.++-...+.+++++.+.+.|+.|.|+.++++...+.+..+..-+- |-+-++++-.+.|+|.+..+..-..++.+..+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~ 134 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRE 134 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChh
Confidence 667778888999999999999999999999999998877766554 4566888999999999999999999999999999
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcccCCCC-------cch-HHH----------hhhHHHHHH---HHHHhhccCCch
Q 008615 229 IRGTLISLKELFIVLGILLGYFVGSFQINAVG-------GWR-YMY----------GLSAPLALL---MGIGMWSLPPSP 287 (559)
Q Consensus 229 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-------~wr-~~f----------~~~~~~~~~---~~~~~~~~~e~p 287 (559)
.+.+..++..+....+.++|..+...+..... +-+ +.+ .+.+++..+ ..+...+.|..
T Consensus 135 tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~- 213 (461)
T KOG3098|consen 135 TIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK- 213 (461)
T ss_pred hHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc-
Confidence 99999999999999999999877555432110 111 111 111111111 11111222221
Q ss_pred HHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHH
Q 008615 288 RWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGL 367 (559)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (559)
..... .+.. + . ...+.-....+++++++...+......
T Consensus 214 ~~~~~---------------~~~~-~-------------~-------------~~~~~l~~~~~l~~~~~ml~L~~~f~~ 251 (461)
T KOG3098|consen 214 DVVNC---------------KSSS-E-------------T-------------SFSELLKLTFKLLKTPKMLLLFPFFFY 251 (461)
T ss_pred chhhh---------------hhhc-c-------------c-------------cHHHHHHHHHHHhcCHhHHHHHHHHHH
Confidence 00000 0000 0 0 000000112334445443333332222
Q ss_pred HHHHHhhChhhHHHhHHHHH---HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh---cCCcchhhhhHHHHHHHHH
Q 008615 368 VLFQQITGQPSVLYYAGPIL---QSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD---LGRRPLLIGGVCGIALSLL 441 (559)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~---~~~~~~~~~~~~~~~~~~~ 441 (559)
..+.... +....|.-+ ...+.......++.....+++.+++.+..+.+.+| +|+++.+.++..+..+.++
T Consensus 252 tG~~~Sf----~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~ 327 (461)
T KOG3098|consen 252 TGLETSF----WISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFL 327 (461)
T ss_pred HHHHHHH----HHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHH
Confidence 2221111 111111111 13344443566777777888888888888888765 6778888888777777766
Q ss_pred HHHHHHHhhcC------------chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHH
Q 008615 442 LLSAYYKILGG------------FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTF 509 (559)
Q Consensus 442 ~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 509 (559)
+.-...+...+ ........+.+..|..-.++....+.++..++| +.|..+.++.-+-..++..++-.
T Consensus 328 li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~-~~~~~~fsi~kfyq~~~s~v~~f 406 (461)
T KOG3098|consen 328 LIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP-DDRAQAFSLFKFYQSVASCVAFF 406 (461)
T ss_pred HHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhh
Confidence 66554332110 113334444455556666666677788888885 77888888888777777666555
Q ss_pred hhHH
Q 008615 510 AFSP 513 (559)
Q Consensus 510 i~g~ 513 (559)
....
T Consensus 407 ~~~~ 410 (461)
T KOG3098|consen 407 FSPY 410 (461)
T ss_pred hhhh
Confidence 4443
No 191
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.20 E-value=6e-10 Score=109.40 Aligned_cols=164 Identities=11% Similarity=0.068 Sum_probs=110.9
Q ss_pred HHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 379 VLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 379 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
+....+.+-+ +++++. .+.+++.....+...++++..|++.||+|.|+++.++.++..+..+.+.+..+.. .+++..
T Consensus 53 ~~~l~~~~~~~~~~ls~-~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~-~~s~~~ 130 (462)
T PRK15034 53 FSAVTVNLNKIGFNFTT-DQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNP-NTPFGI 130 (462)
T ss_pred HHHHHHHhhhhhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHccc-CCCHHH
Confidence 3333444444 688887 7889899989999999999999999999999999999888887777666431111 123333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHH-----Hhc-------------C
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLK-----ELL-------------G 519 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~-----~~~-------------g 519 (559)
+....++.+..+..+ +.....+.+.+|+++||++.|+....+++|..+.+.+...+. +.. +
T Consensus 131 lli~r~l~Gigg~~f-~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~ 209 (462)
T PRK15034 131 FIVIALLCGFAGANF-ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMS 209 (462)
T ss_pred HHHHHHHHHHHHHhH-HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHH
Confidence 444444444433333 445577889999999999999997777777776666555433 222 2
Q ss_pred chhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 520 AENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
++.+.++...+.++..++.+++.++.
T Consensus 210 ~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 210 LANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 44555666666666666666665543
No 192
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.19 E-value=1.5e-09 Score=110.07 Aligned_cols=147 Identities=17% Similarity=0.185 Sum_probs=117.7
Q ss_pred cccchhHHHHHHH-HHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH---Hhc-hhHhHHHHHHHHHHhhhhh
Q 008615 138 FNLSAVQLGLVVS-GSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT---AYA-PGLGVLLVGRLLYGLGIGL 212 (559)
Q Consensus 138 ~~~s~~~~g~~~s-~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~---~~~-~~~~~l~~~r~l~G~~~g~ 212 (559)
+|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-+++.++.|.
T Consensus 253 ~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~ 332 (491)
T PRK11010 253 VGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGM 332 (491)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 7899999999974 6678999999999999999999998877666555544332 333 3555555566776666666
Q ss_pred hhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCC
Q 008615 213 AMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPP 285 (559)
Q Consensus 213 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 285 (559)
..+...++..+..+++.+++..++.+...++|..+++.+.|.+.+.. ||+..|.+.++++++..++.+++++
T Consensus 333 ~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~-G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 333 GTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH-GWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66777888889999999999999999999999999988999998887 9999999999998887776665543
No 193
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.19 E-value=1.1e-09 Score=105.09 Aligned_cols=178 Identities=14% Similarity=0.125 Sum_probs=127.3
Q ss_pred hhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhh
Q 008615 351 EVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLI 430 (559)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 430 (559)
.++.++....+.+...++.+. ...+.+++--++++.+..+ ..-|......-.+.++.-++.+++.+|+|+-+++.
T Consensus 366 ~~~~s~~~llff~~av~mG~g----~~lv~tFLfWHled~~~~~-~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~ 440 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAG----VGLVFTFLFWHLEDLGGIK-TLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY 440 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHH----HHHHHHHHHHHHhhcCCcc-eeeeehhhhhccchHHHHHHHHHHHHHhcccceee
Confidence 455665544433333332222 2234445555678877665 56677777777888999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHH-HHHHHHHHHH
Q 008615 431 GGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLT-NFGSNAIVTF 509 (559)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~-~~~g~~i~~~ 509 (559)
.++.+..+=++.+... .++|.++.+=++-....+..+..+ .+|+....|++.++++.++.... ..+|-.+|++
T Consensus 441 lgLa~~~~Rf~~~S~L-----~n~W~vLPieilqgit~aliWaa~-~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 441 LGLACNVGRFLYYSYL-----QNPWMVLPIEILQGITHALIWAAI-ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred ehhhHHHHHHHHHHHh-----cCchheeeHHHHHHHHHHHHHHHH-HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 9988888777666642 456655555444444444444444 48999999999999999998865 6678899999
Q ss_pred hhHHHHHhcCchhhHHHHHHHHHHHHHHHH
Q 008615 510 AFSPLKELLGAENIFLLFAAIAFLAVLFIV 539 (559)
Q Consensus 510 i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 539 (559)
|.|.+.+.+|....|.++++.+++.+++..
T Consensus 515 IGG~~v~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 515 IGGFVVERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred hhhhhheeehhHHHHHHHHHHHHHHHHHHH
Confidence 999999999988889888877776665443
No 194
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.18 E-value=4.5e-10 Score=111.86 Aligned_cols=148 Identities=20% Similarity=0.193 Sum_probs=134.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchH--HHHHHHHHHHHHHHHHHHh--------chhHhHHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRK--RELIIAAVLYALGALTTAY--------APGLGVLLVGRLLYG 207 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~--------~~~~~~l~~~r~l~G 207 (559)
+|++..+...+.-+..+...+|++++|++.||+|.| ++++++++++.+..+...+ .++-+.+.+.-++.|
T Consensus 312 lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G 391 (477)
T PF11700_consen 312 LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIG 391 (477)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999 8998888888666655555 678889999999999
Q ss_pred hhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCC
Q 008615 208 LGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPP 285 (559)
Q Consensus 208 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 285 (559)
+..|..++...++.+++.|+++.+..+|++....-....+||++.+.+.+..++-|+.++...++.++.+++.++++.
T Consensus 392 ~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 392 LFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred HHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999999999999999888766999999988888888877777654
No 195
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.18 E-value=8.5e-10 Score=103.30 Aligned_cols=161 Identities=14% Similarity=0.062 Sum_probs=126.4
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
.+....+.+-++.++++ .+.+++.....+.+.+.++..|.+.||+|.|++...+.++..+-++.+.+... ......
T Consensus 32 l~s~l~~~i~~~~~LS~-~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~---~~~~~~ 107 (417)
T COG2223 32 LFSPLGVFIKSDFGLSE-GQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVT---YPSTWQ 107 (417)
T ss_pred HHHHHHhhhccccCCCH-HHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHcc---CCchHH
Confidence 34444455557888888 89999999999999999999999999999999999999998888887776533 222233
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC---chhhHHHHHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG---AENIFLLFAAIAFLA 534 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g---~~~~~~~~~~~~~~~ 534 (559)
+..+.++.+..+..+ .+...++++.||++++|.++|+.. .+++|..+...+...+....| |+.+..+.....++.
T Consensus 108 ll~~gll~G~~GasF-av~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 108 LLVIGLLLGLAGASF-AVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIA 185 (417)
T ss_pred HHHHHHHHhccccee-hcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 344444444444333 345588999999999999999999 999999999999999999999 888888888888887
Q ss_pred HHHHHhhccC
Q 008615 535 VLFIVRTVPE 544 (559)
Q Consensus 535 ~~~~~~~~~~ 544 (559)
.++.++...+
T Consensus 186 ~v~~~~~~~d 195 (417)
T COG2223 186 AVLAWLGMND 195 (417)
T ss_pred HHHHHHHhCC
Confidence 7777776644
No 196
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.18 E-value=8.1e-10 Score=112.16 Aligned_cols=154 Identities=14% Similarity=0.059 Sum_probs=106.4
Q ss_pred hhhHHHhHHHHH-HHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhhhhHHHHHHHHHHHHHHHHhhcCc
Q 008615 376 QPSVLYYAGPIL-QSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD-LGRRPLLIGGVCGIALSLLLLSAYYKILGGF 453 (559)
Q Consensus 376 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (559)
++.+..+.+.++ +++|.+. .+++..............+++|+++|| +|||+.+..+.++.+++..++.+. ...
T Consensus 37 ~y~~~~~l~~yl~~~lg~s~-~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~----~~~ 111 (500)
T PRK09584 37 YYGLQGIMAVYLVKQLGMSE-ADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWS----GHD 111 (500)
T ss_pred HHHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh----ccc
Confidence 345666777776 5577776 555666655555555556789999999 599999999988888876666532 111
Q ss_pred hhHHHHHHHHHHHHhhcccccccceeecccCCccc--hhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHH
Q 008615 454 PLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRT--RGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIA 531 (559)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~--~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~ 531 (559)
... +.......+.......+...++..|.+|++. +..+.++.+...++|..++|.+.|.+.+..||++.|.+.++..
T Consensus 112 ~~~-l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~ 190 (500)
T PRK09584 112 AGI-VYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGM 190 (500)
T ss_pred HHH-HHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Confidence 222 2222223333333344555578889887543 4567888899999999999999999999999999998877554
Q ss_pred HHHH
Q 008615 532 FLAV 535 (559)
Q Consensus 532 ~~~~ 535 (559)
+++.
T Consensus 191 ~i~~ 194 (500)
T PRK09584 191 LITV 194 (500)
T ss_pred HHHH
Confidence 4444
No 197
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.18 E-value=8.5e-11 Score=97.72 Aligned_cols=135 Identities=19% Similarity=0.211 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeeccc
Q 008615 404 VIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEI 483 (559)
Q Consensus 404 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 483 (559)
...++.+++.++.+++.||++||+.+..+..+..++.+.+... .+.+.... ..+..+.......+....+..|.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALS-----SNITVLII-ARFLQGFGAAFALVAGAALIADI 79 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHh-----ccHHHHHH-HHHHHHHHHHHHHHhHHHHHHHH
Confidence 4567788899999999999999999988877777766655431 22232222 23333333333445566788999
Q ss_pred CCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 484 FPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 484 ~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
+|++.|+++.++.+....++..+++.+.+.+.+..+++..+.+.+.+.+++.++.++..+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999998888888888888777777766665554
No 198
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.17 E-value=1.4e-09 Score=109.64 Aligned_cols=121 Identities=22% Similarity=0.308 Sum_probs=104.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc-hhHhHHHHHHHHHHhhhhhhhhhhhh
Q 008615 141 SAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA-PGLGVLLVGRLLYGLGIGLAMHGAPL 219 (559)
Q Consensus 141 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~ 219 (559)
+..+.+++.+...++..++.+++++++||+|+|+++.++.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999998888887777665 46677778889999999999999999
Q ss_pred hhhccCC-------cccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcc
Q 008615 220 YIAETCP-------SQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGW 262 (559)
Q Consensus 220 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~w 262 (559)
+++|..+ ++++|.+.++.+....+|..+++.+.+.+.+.. ||
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~-G~ 383 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGII-GY 383 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9998865 456799999999999999999999999887654 44
No 199
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.16 E-value=1.4e-09 Score=107.68 Aligned_cols=157 Identities=15% Similarity=0.021 Sum_probs=115.8
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
......|.+.++.+.+. .+.+++.....++..++.+..|++.||+|||+.+..+.++.+++.+++..... ..++..
T Consensus 21 ~~~~l~~~~~~~~~~s~-~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~---~~~~~~ 96 (410)
T TIGR00885 21 ITNPMVPQFQQAFTLTA-FQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAE---IMNYTL 96 (410)
T ss_pred hHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHh---hccHHH
Confidence 34466788888888887 88999999999999999999999999999999999999998888777543211 122333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh--------------------
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL-------------------- 517 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-------------------- 517 (559)
+....+..+.......+....++.+..|++++++..++.+....+|..++|.+.+.+...
T Consensus 97 ~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~ 176 (410)
T TIGR00885 97 FLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSA 176 (410)
T ss_pred HHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHH
Confidence 333333333333333334446777888989999999999999999999999998877532
Q ss_pred ------cCchhhHHHHHHHHHHHHHHH
Q 008615 518 ------LGAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 518 ------~g~~~~~~~~~~~~~~~~~~~ 538 (559)
.+|+.+|++.+++.++..++.
T Consensus 177 ~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 177 IKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357788888777666554433
No 200
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.15 E-value=1.7e-09 Score=110.69 Aligned_cols=149 Identities=14% Similarity=-0.006 Sum_probs=104.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccc
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPI 475 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (559)
...+++.....++.+++.++.|++.||+|||+.+..+.++..++.++...............+...-+..+.......+.
T Consensus 56 ~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 135 (502)
T TIGR00887 56 SVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPL 135 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 45678889999999999999999999999999999888888877666554210000001223334444444444445566
Q ss_pred cceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH-----------------------hcCchhhHHHHHHHHH
Q 008615 476 SWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE-----------------------LLGAENIFLLFAAIAF 532 (559)
Q Consensus 476 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~-----------------------~~g~~~~~~~~~~~~~ 532 (559)
...++.|.+|++.|++++++.+....+|..+++.+...+.. ..+|+..+.+.++..+
T Consensus 136 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~ 215 (502)
T TIGR00887 136 SAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPAL 215 (502)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHH
Confidence 67999999999999999999999999999888887765532 1367777765544444
Q ss_pred HHHHHHHhhccCC
Q 008615 533 LAVLFIVRTVPET 545 (559)
Q Consensus 533 ~~~~~~~~~~~~~ 545 (559)
+ .++..+++||+
T Consensus 216 i-~~~~~~~lpES 227 (502)
T TIGR00887 216 L-ALYFRLTIPET 227 (502)
T ss_pred H-HHHHHHhCCCC
Confidence 3 33344567775
No 201
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.13 E-value=7.2e-10 Score=111.05 Aligned_cols=147 Identities=18% Similarity=0.238 Sum_probs=137.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhc--hHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLG--RKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~G--rr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 215 (559)
.+.+..+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++.+.+.++++++.++..-.+.|++.|....
T Consensus 328 ~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~ 407 (509)
T KOG2504|consen 328 LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSS 407 (509)
T ss_pred cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999988 56677889999999999999999999999999999999999988
Q ss_pred hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccC
Q 008615 216 GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLP 284 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 284 (559)
....++.|+.+.++-..+.|+...+.+++.++||++++++.+..++|...|+..++..++..+.++..+
T Consensus 408 l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 408 LTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 888899999999999999999999999999999999999998886799999999999998887777665
No 202
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.12 E-value=9.5e-10 Score=108.84 Aligned_cols=142 Identities=18% Similarity=0.058 Sum_probs=111.8
Q ss_pred cccchhHHHHHHHHHH-HHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh------chhHhHHHHHHHHHHhhh
Q 008615 138 FNLSAVQLGLVVSGSL-YGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY------APGLGVLLVGRLLYGLGI 210 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~-l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~------~~~~~~l~~~r~l~G~~~ 210 (559)
.|.+..++|++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++...++...++.+++.
T Consensus 238 ~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (390)
T TIGR02718 238 AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT 317 (390)
T ss_pred cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH
Confidence 7899999999988876 466777899999999999999998877766443332221 123344455566677777
Q ss_pred hhhhhhhhhhhhccCCc-ccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHh
Q 008615 211 GLAMHGAPLYIAETCPS-QIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGM 280 (559)
Q Consensus 211 g~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~ 280 (559)
+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+.. ||+..|++.+++.++..++.
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~-G~~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF-GYAGGFLSGTVLAVLAILLA 387 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHHHHHHHHHHh
Confidence 87778888887777776 78999999999999999999999999998877 89999998887777655443
No 203
>TIGR00898 2A0119 cation transport protein.
Probab=99.12 E-value=1.2e-09 Score=112.14 Aligned_cols=135 Identities=22% Similarity=0.167 Sum_probs=112.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhH--hHHHHHHHHHHhhhhhhhhhhhhhhhccCCc
Q 008615 150 SGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGL--GVLLVGRLLYGLGIGLAMHGAPLYIAETCPS 227 (559)
Q Consensus 150 s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 227 (559)
.+..+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+..++....+..|.+|.
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~ 441 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPT 441 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccH
Confidence 34456777888999999999999999999999999988888776644 4555566777777888888899999999999
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCch
Q 008615 228 QIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSP 287 (559)
Q Consensus 228 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 287 (559)
+.|+.++|+......+|.+++|.+.+ +. .. ++..++++.++..++..++.+++||+.
T Consensus 442 ~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~lpet~ 498 (505)
T TIGR00898 442 VVRNLGVGVCSTMARVGSIISPFLVY-LG-EK-WLFLPLVLFGGLALLAGILTLFLPETK 498 (505)
T ss_pred HHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HH-HHhhHHHHHHHHHHHHHHHHHcCcCCC
Confidence 99999999999999999999999988 33 33 677888888888888877788888864
No 204
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.11 E-value=2.4e-09 Score=101.48 Aligned_cols=132 Identities=14% Similarity=0.137 Sum_probs=108.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|+++.+.++..+.+..++.++.++.+++.||+|+|+++.++.++..++.++....++... ..+-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999998888888887766666554433 345668899999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHH
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLA 273 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~ 273 (559)
.+...+.++++ .+.+.++. ....+|.+++|++.|.+.+.. |.+..|++..+..
T Consensus 252 ~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~-g~~~a~~v~~~~~ 304 (310)
T TIGR01272 252 FSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCL-GIQLAFALPVPCY 304 (310)
T ss_pred HHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhc-cchHHHHHHHHHH
Confidence 99998888754 45666665 566789999999999988877 8888887554443
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.10 E-value=2e-09 Score=121.61 Aligned_cols=192 Identities=14% Similarity=0.009 Sum_probs=121.9
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Q 008615 350 LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPL 428 (559)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 428 (559)
+.+++++.++++++..++..+........+..+..+.+.. .+.+.....++......+..++..+++|+++||++||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 3467777777777666555554322222222222222222 222222356777778888899999999999999999997
Q ss_pred hhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHH
Q 008615 429 LIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVT 508 (559)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~ 508 (559)
+.....+..+...+...... ...+..+++..++.+.....+.|...+++.+.+|+++++.++|+.++...+|.+++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~---~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp 161 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFH---LNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGT 161 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHH
Confidence 64422222222111111111 123344445555556666666778889999999999999999999999999999999
Q ss_pred HhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 509 FAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 509 ~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
.+.|.+.+..||...|+..+++.++ .+++.+.+++.
T Consensus 162 ~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 197 (1140)
T PRK06814 162 IIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKT 197 (1140)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCC
Confidence 9999999998988777443333333 33344444443
No 206
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.09 E-value=6.2e-10 Score=104.23 Aligned_cols=149 Identities=23% Similarity=0.214 Sum_probs=136.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
+|++..++.++.-.-.+..+++++++|+|.||+|.|+++.++++++.+.++..-+...-..+.++-.+.|...|..+..+
T Consensus 283 ~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~S 362 (438)
T COG2270 283 LGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASS 362 (438)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHH
Confidence 89999999999999999999999999999999999999999999999988888887777777888899999999999999
Q ss_pred hhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCc
Q 008615 218 PLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPS 286 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 286 (559)
.++..+..|+++-++.+|++....-.+..+||.+-+.+.+..++-|..+....++.++.+++.+.+|+.
T Consensus 363 RSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 363 RSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999999999999999999999999999999988877678888888888777777777777653
No 207
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.09 E-value=1.5e-09 Score=108.94 Aligned_cols=154 Identities=18% Similarity=0.112 Sum_probs=108.5
Q ss_pred HHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHH
Q 008615 380 LYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVS 459 (559)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (559)
..-++.+..+.|.++ ...++.....++..++.++.|+++|.+|||+.++.+.++..++.++.+-. .+....+.
T Consensus 64 a~~l~~I~~diG~~~--~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA-----~~~~~~ia 136 (599)
T PF06609_consen 64 ASILPYINADIGGSD--NWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATA-----QNMNTFIA 136 (599)
T ss_pred HHHHHHHHHhcCCCc--cchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcC-----CcHHHHHH
Confidence 344566777787764 67778888889999999999999999999999999999999998887731 22233333
Q ss_pred HHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHH
Q 008615 460 ALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIV 539 (559)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 539 (559)
...+.+.+. +...+....++|..|.+.|..+.++..........+++.+...+..+.+|+|.|++.+++..+++++.+
T Consensus 137 g~~l~Gvga--G~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 137 GMVLYGVGA--GVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHHHHHHhh--HHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 333332222 223334456899999999988877766555444455666666665566899999988887777766554
Q ss_pred hhc
Q 008615 540 RTV 542 (559)
Q Consensus 540 ~~~ 542 (559)
+++
T Consensus 215 ~fY 217 (599)
T PF06609_consen 215 FFY 217 (599)
T ss_pred HHh
Confidence 443
No 208
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=4.6e-09 Score=105.32 Aligned_cols=158 Identities=15% Similarity=0.076 Sum_probs=103.5
Q ss_pred hhhHHHhHHHHHHHcC---CCCchh---HHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHh
Q 008615 376 QPSVLYYAGPILQSAG---FSAAAD---ATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKI 449 (559)
Q Consensus 376 ~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (559)
...+.+..|.+.++.+ .+. .+ .+.......++..++.++.|+++||+|||+.+..+.++.+++.++.++....
T Consensus 38 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~ 116 (432)
T PRK10406 38 FYVYSFCSLYFAHIFFPSGNTT-TQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGY 116 (432)
T ss_pred HHHHHHHHHHHHHHhCCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 3345555666666654 222 22 2333444456666999999999999999999999999988888776642100
Q ss_pred hc--CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHH--------HhcC
Q 008615 450 LG--GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLK--------ELLG 519 (559)
Q Consensus 450 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~--------~~~g 519 (559)
.. ......+...-+..+.......+...+++.|.+|+++|+...++.......|..+++.+...+. ..+|
T Consensus 117 ~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g 196 (432)
T PRK10406 117 ETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWG 196 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccc
Confidence 00 0011223334444455545555667789999999999999999888777777777766544433 2578
Q ss_pred chhhHHHHHHHHHHH
Q 008615 520 AENIFLLFAAIAFLA 534 (559)
Q Consensus 520 ~~~~~~~~~~~~~~~ 534 (559)
|+..|++.++..++.
T Consensus 197 Wr~~F~i~~~~~ll~ 211 (432)
T PRK10406 197 WRIPFALGAVLAVVA 211 (432)
T ss_pred hHHHHHHHHHHHHHH
Confidence 999998766655544
No 209
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.08 E-value=1.5e-09 Score=112.75 Aligned_cols=177 Identities=14% Similarity=-0.003 Sum_probs=129.4
Q ss_pred HHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHH
Q 008615 363 IGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLL 442 (559)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 442 (559)
+...+..+........+..-++.+-++++.++ .+.|++...+.++.+++.++.+++.||.+||+.+.++.++.+++.++
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss-~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll 114 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRFKLST-SSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFL 114 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhCCCC-CcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHH
Confidence 33333444443333445556677777888887 78999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhhc---------------------------------------------CchhHHHHHHHHHHHHhhcccccccc
Q 008615 443 LSAYYKILG---------------------------------------------GFPLVAVSALLLYVGCYQISFGPISW 477 (559)
Q Consensus 443 ~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (559)
+++-..... ...+..+++.-++.|.+.....++..
T Consensus 115 ~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~ 194 (633)
T TIGR00805 115 LSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI 194 (633)
T ss_pred HhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc
Confidence 765321000 00233344455556666666667778
Q ss_pred eeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc---------------------C-chhhHHHHHHHHHHHH
Q 008615 478 LMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL---------------------G-AENIFLLFAAIAFLAV 535 (559)
Q Consensus 478 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~---------------------g-~~~~~~~~~~~~~~~~ 535 (559)
+++.|.+|++.|+...|+.+....+|..+++.+.+.+.+.+ | |+..|++.+++.++.+
T Consensus 195 ~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~ 274 (633)
T TIGR00805 195 SYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTS 274 (633)
T ss_pred hhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887643 1 4455777776666655
Q ss_pred HHHHh
Q 008615 536 LFIVR 540 (559)
Q Consensus 536 ~~~~~ 540 (559)
+..++
T Consensus 275 v~l~~ 279 (633)
T TIGR00805 275 IPFFF 279 (633)
T ss_pred HHHHh
Confidence 54443
No 210
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.08 E-value=2.9e-09 Score=104.00 Aligned_cols=163 Identities=17% Similarity=0.069 Sum_probs=112.7
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCcchh-hhhHHHHHHHHHHHHHHHHhhc
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL-----GRRPLL-IGGVCGIALSLLLLSAYYKILG 451 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 451 (559)
.+....|.+.++.|.+. .+.++.... .+...+ .++.|++.||+ |||+.+ +.+.++.+++...+.+. .+
T Consensus 6 ~~~~~~~~~~~~~g~s~-~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~---~~ 79 (356)
T TIGR00901 6 LVGNTLPYWLRSKNVSL-KTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL---VP 79 (356)
T ss_pred hHHhHHHHHHHHcCCCH-HHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC---Cc
Confidence 34556788889999988 677777544 344444 88999999997 788864 45555555554444432 11
Q ss_pred CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC--------chhh
Q 008615 452 GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG--------AENI 523 (559)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g--------~~~~ 523 (559)
......+....+..+.......+...+++.|.+|+++|+.+.++......+|..+++.+.+.+.+..| |+..
T Consensus 80 ~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 80 STDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 12222232332333333334445556888999999999999999999999999999999999988888 9999
Q ss_pred HHHHHHHHHHHHHHHHhhccCCC
Q 008615 524 FLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
|++.+++.++..++.++..+|.+
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~ 182 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQ 182 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCC
Confidence 98888877776655555556643
No 211
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.07 E-value=3.1e-10 Score=104.74 Aligned_cols=146 Identities=16% Similarity=0.134 Sum_probs=125.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccc
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPI 475 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (559)
.+.|+++....+..++.+++.|.+.||+|+|-.+++|++.+..+.+++++ .+.+..+.+.-...+....+....
T Consensus 106 ~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFaf------g~sy~~l~vAR~LQgvgsA~~~ts 179 (464)
T KOG3764|consen 106 TQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAF------GNSYPMLFVARSLQGVGSAFADTS 179 (464)
T ss_pred cchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHH------cchhHHHHHHHHHhhhhHHHHHhh
Confidence 68999999999999999999999999999999999999999999998886 344445555556666666666666
Q ss_pred cceeecccCCccc-hhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCC
Q 008615 476 SWLMVSEIFPLRT-RGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKG 547 (559)
Q Consensus 476 ~~~~~~~~~p~~~-~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (559)
..+++++.+|.+. |++++|+...+..+|-.++|++.|.+++..|+..+|++++.++++-..+.++.++.++.
T Consensus 180 glamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~ 252 (464)
T KOG3764|consen 180 GLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEM 252 (464)
T ss_pred hHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCcccc
Confidence 6788999999766 69999999999999999999999999999999999999999999998877776655443
No 212
>PTZ00207 hypothetical protein; Provisional
Probab=99.06 E-value=7.1e-09 Score=104.90 Aligned_cols=165 Identities=14% Similarity=0.102 Sum_probs=109.2
Q ss_pred hhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 377 PSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
+.+..+.+.+.+++|++. .+.+.+...... .....++.|++.||+|+|+++.++.++..++.++.++.....-..+.+
T Consensus 44 y~fsv~s~~L~~~lgls~-~~l~~i~svg~~-~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~ 121 (591)
T PTZ00207 44 YAFNLISGAMQARYNLTQ-RDLSTITTVGIA-VGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVV 121 (591)
T ss_pred HHHHHHHHHHHHHhCcCH-HHHHHHHHHHHH-HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHH
Confidence 456677888888888887 566666655333 334566789999999999999999999999988877642110012233
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVL 536 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~ 536 (559)
.+.+..++.+.......+.....+.+.+| ++||.+.|+......+|+++.+.+...+.. .++...|++.+++.++..+
T Consensus 122 ~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~l 199 (591)
T PTZ00207 122 RLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGI 199 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHH
Confidence 33333333333333232333355677787 789999999999999999876666555544 3566777777777777666
Q ss_pred HHHhhccCC
Q 008615 537 FIVRTVPET 545 (559)
Q Consensus 537 ~~~~~~~~~ 545 (559)
+.+.+++..
T Consensus 200 l~~~~vr~p 208 (591)
T PTZ00207 200 LAIVFMRLP 208 (591)
T ss_pred HHHhheeCC
Confidence 666655443
No 213
>PRK15075 citrate-proton symporter; Provisional
Probab=99.05 E-value=6.1e-09 Score=104.54 Aligned_cols=163 Identities=17% Similarity=0.014 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHH-----HHHHHHHHHHHHHHhhhcCCcchhhhhHHHH
Q 008615 362 IIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVI-----GVFKLVMTWIAVAKVDDLGRRPLLIGGVCGI 436 (559)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 436 (559)
.....+..+........+....|.+.++++.++.....+..... .+...++.++.|++.||+|||+.+..+..+.
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~ 96 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIM 96 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHH
Confidence 33344444444444556778888888888877633333332221 2223467899999999999999999999888
Q ss_pred HHHHHHHHHHHHhhcCchh------HHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHh
Q 008615 437 ALSLLLLSAYYKILGGFPL------VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFA 510 (559)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 510 (559)
.++.++..+.. +... ..+...-+..+.......+....++.|.+|+++|++++++.....++|..+++.+
T Consensus 97 ~~~~~l~~~~~----~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 97 ASGTLLIAFVP----GYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHhCC----cHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 88877776421 1110 0122222333333333344445789999999999999999998888887777776
Q ss_pred hHHH--------HHhcCchhhHHHHH
Q 008615 511 FSPL--------KELLGAENIFLLFA 528 (559)
Q Consensus 511 ~g~l--------~~~~g~~~~~~~~~ 528 (559)
.+.+ .+..||+..|++..
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~ 198 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGC 198 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHH
Confidence 6655 34678888887643
No 214
>PRK10133 L-fucose transporter; Provisional
Probab=99.05 E-value=9.6e-09 Score=102.74 Aligned_cols=136 Identities=13% Similarity=-0.043 Sum_probs=99.9
Q ss_pred hhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchh
Q 008615 376 QPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPL 455 (559)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (559)
......+.|.+-++++.++ .+.++......++..++.++.|++.||+|||+++..+..+.+++.+++..... ..++
T Consensus 42 ~~~~~~~~p~i~~~~~~s~-~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~---a~~~ 117 (438)
T PRK10133 42 NNLNDILLPQFQQAFTLTN-FQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE---IMNY 117 (438)
T ss_pred HHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh---cCCH
Confidence 3456677888888888887 89999999999999999999999999999999999999999888876532111 2233
Q ss_pred HHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHH
Q 008615 456 VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLK 515 (559)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~ 515 (559)
..+....+..+.......+....++.+..|++.+...+++.+....+|..+++.+.+.+.
T Consensus 118 ~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 118 TLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333444466677767666666789999999999999998876554
No 215
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=7.9e-09 Score=102.66 Aligned_cols=172 Identities=19% Similarity=0.148 Sum_probs=122.9
Q ss_pred HHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc-----CCcc-hhhhhHHHHHHHH
Q 008615 367 LVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL-----GRRP-LLIGGVCGIALSL 440 (559)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~-~~~~~~~~~~~~~ 440 (559)
..++.+.........-+|.++++.|.+. .+.+++...... .+..++.|+++||+ |||| .+..+.++.+++.
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~g~~~-~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~ 82 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVEGLDI-QTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASI 82 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHH
Confidence 3344555555667778899999999998 788877665554 68889999999999 7765 5777777776666
Q ss_pred HHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh-cC
Q 008615 441 LLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL-LG 519 (559)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-~g 519 (559)
..+.+. ........+....+..+++.....+...+++.|.+|+++|+++.++......+|..+++.+.+.+.+. .|
T Consensus 83 ~~l~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g 159 (402)
T PRK11902 83 AAMAFC---PPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG 159 (402)
T ss_pred HHHHhc---CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC
Confidence 655432 11222333333333334444445566678899999999999999999998899999999999988885 48
Q ss_pred chhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 520 AENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
|+..|++.+++.++..+. .+..+|+
T Consensus 160 w~~~f~i~a~~~l~~~l~-~~~~~e~ 184 (402)
T PRK11902 160 WGNTYLLMAGLMLAGALT-TLWAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-HHhcCCC
Confidence 999999888777665543 3445554
No 216
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.02 E-value=8.9e-07 Score=86.28 Aligned_cols=336 Identities=14% Similarity=0.012 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHH------hc--h-------hHhHHHHHHHHHHhhhhhh
Q 008615 149 VSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTA------YA--P-------GLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 149 ~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~------~~--~-------~~~~l~~~r~l~G~~~g~~ 213 (559)
.-.-.+...++++..|.+.||..|.+++..++++.-++..+.+ +. . -+..+++.-.+.|.-.-..
T Consensus 44 gl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~La 123 (432)
T PF06963_consen 44 GLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLA 123 (432)
T ss_pred HHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHH
Confidence 3344456778889999999999999988777655433222221 11 1 1112222222222221111
Q ss_pred h-hhhhhhhhccC------CcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc-c--
Q 008615 214 M-HGAPLYIAETC------PSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS-L-- 283 (559)
Q Consensus 214 ~-~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~-~-- 283 (559)
. ....++=.||. +++.+.+.++...-.-.+.-+++|++.|.+.... +.+...++.++..++..+.=++ +
T Consensus 124 s~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~-s~~~~~~~i~~~N~~S~~vEy~~l~~ 202 (432)
T PF06963_consen 124 SIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFA-SPVIAAIFIAGWNLASVFVEYFLLAR 202 (432)
T ss_pred HhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 11222223443 3455677788888888889999999999988876 8888877777777765543322 1
Q ss_pred --CCchHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHH
Q 008615 284 --PPSPRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAF 361 (559)
Q Consensus 284 --~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (559)
...|. +..|+++++...+.+.+ .. ..+...........+ .-.+....|+..++.+.+...
T Consensus 203 VY~~~P~-L~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~------~~~~~~~~w~~Y~~q~vflas 264 (432)
T PF06963_consen 203 VYNSVPA-LAVKKRSSESESSSDEE---------SS--SESSSDPSILKRLWN------PLRTIIRGWRTYFRQPVFLAS 264 (432)
T ss_pred HHHhChH-hcCCCCCcccccccccc---------cc--ccccchhhHHHHHHH------HHHHHhccHHHHHhCHHHHHH
Confidence 11222 11110000000000000 00 000000000000000 011123456666776644433
Q ss_pred HHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHH
Q 008615 362 IIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLL 441 (559)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 441 (559)
+- +.+.++.... +......|+...|+++ ...+.+-....+.++.|.++..++.+|+|..+.-.++.....++..
T Consensus 265 ~a-lalLY~TVLs----f~~lmt~yl~~~G~s~-~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 265 FA-LALLYFTVLS----FGGLMTAYLKSQGYSP-SVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HH-HHHHHHHHhc----CcHHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 32 2233332222 3444556677778888 8889999999999999999999999999998887777766655544
Q ss_pred HHHHHHHhhcCc-hhHHHHHHHHHHH---HhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHH
Q 008615 442 LLSAYYKILGGF-PLVAVSALLLYVG---CYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTF 509 (559)
Q Consensus 442 ~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~ 509 (559)
+........... +......++.... .+--++=....-+.+|.+|+++||+..|+-+...++...+.-.
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~ 410 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFV 410 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 443333222222 1111111111111 1111122233367889999999999999999888887654443
No 217
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.02 E-value=1.5e-08 Score=97.87 Aligned_cols=138 Identities=11% Similarity=0.012 Sum_probs=111.8
Q ss_pred hHHHhHHHHHHHcCCCCchh-HHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 378 SVLYYAGPILQSAGFSAAAD-ATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
...+..|.+.++.|++. .+ .+.+...+..+..+..+.+|++.||+|.|+++..+.+...+..+++++. ....
T Consensus 44 n~s~a~p~L~~elglT~-~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa------~Sl~ 116 (511)
T TIGR00806 44 GESFITPYLLTVLNFTE-ETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG------TSVW 116 (511)
T ss_pred hHHHHHHHHHHHcCCCH-HHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH------HHHH
Confidence 45556777778899998 66 9999999999999999999999999999999999998888888887763 2344
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIF 524 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~ 524 (559)
.+.+.-++.|.+..... ....++...+|+++|+++.|+.+....+|.++++++.+. ...+||+...
T Consensus 117 ~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~ 182 (511)
T TIGR00806 117 HMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYS 182 (511)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHH
Confidence 44445555555555545 556888999999999999999999999999999999998 5567876543
No 218
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.01 E-value=1.1e-08 Score=91.65 Aligned_cols=145 Identities=19% Similarity=0.131 Sum_probs=115.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc-------hhHhHHHHHHHHHHhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA-------PGLGVLLVGRLLYGLGI 210 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-------~~~~~l~~~r~l~G~~~ 210 (559)
+|+|.+|...+.++-.+|..+ .++.|.+.|++|++.++.+|.+...+|..+..++ .++|.+.+..++.|.+.
T Consensus 32 l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~ 110 (250)
T PF06813_consen 32 LGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSS 110 (250)
T ss_pred hCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccH
Confidence 999999999999999999987 5889999999999999999999999998887653 36788888888888888
Q ss_pred hhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCC
Q 008615 211 GLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPP 285 (559)
Q Consensus 211 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 285 (559)
+.........-.+.|| ++||.+.|+.-...+++..+-..+...+.... .-+..+.+.....++.++..+++++
T Consensus 111 ~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~-~~~fll~la~~~~~v~l~~~~~vr~ 183 (250)
T PF06813_consen 111 CWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDD-PSSFLLFLAVLPAVVCLVAMFFVRP 183 (250)
T ss_pred HHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHHHHHhhheec
Confidence 7777777666778887 57999999999999999988777766655543 4455555555555555555555543
No 219
>PRK09848 glucuronide transporter; Provisional
Probab=99.00 E-value=1.3e-08 Score=102.58 Aligned_cols=121 Identities=25% Similarity=0.272 Sum_probs=100.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch--hHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP--GLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+|.+....++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+...+
T Consensus 259 ~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~ 338 (448)
T PRK09848 259 LNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMT 338 (448)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 666665555555555678888999999999999999999999999888887777643 677777788899999999999
Q ss_pred hhhhhhhccCCcc-------cchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 216 GAPLYIAETCPSQ-------IRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 216 ~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
...+++.|..|.+ ++|...++.+....+|..+|+.+.+.+.+.
T Consensus 339 ~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 339 VMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888753 358899999999999999999988876543
No 220
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.98 E-value=2.7e-09 Score=98.00 Aligned_cols=114 Identities=18% Similarity=0.187 Sum_probs=96.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccc
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPI 475 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (559)
..+|.+...+.+..++.++..|.++||+|||.++.++.+..++..++.+. ..++..++..-+..|.+..... +
T Consensus 68 ~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~------S~~F~afv~aR~l~Gi~kgnl~-v 140 (451)
T KOG2615|consen 68 FYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWAL------SRNFAAFVLARFLGGIFKGNLS-V 140 (451)
T ss_pred hhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHhhhhccCchH-H
Confidence 57889999999999999999999999999999999999998887776664 3344444444566777766655 4
Q ss_pred cceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008615 476 SWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE 516 (559)
Q Consensus 476 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 516 (559)
..++++|++++++|+.+++.++....+|.++||.+.|++..
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 45999999999999999999999999999999999999987
No 221
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.98 E-value=5.6e-09 Score=100.09 Aligned_cols=144 Identities=17% Similarity=0.206 Sum_probs=126.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
-+.+....|.+.+...+.-++...+..++.+|+|.|+.++++.++.++=.++++++++.+.+.+.+.+.|+-.+......
T Consensus 254 ~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~ 333 (412)
T PF01306_consen 254 AGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAA 333 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 35567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCcccchhhhhH-HHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 218 PLYIAETCPSQIRGTLISL-KELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
..++.+.+|+|-.++...+ .+...++|.++.+.++|.+.+.. |.+..|++.+.+.++..++..+
T Consensus 334 fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~-G~~~tylimg~iv~~~~li~~f 398 (412)
T PF01306_consen 334 FKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRI-GFQHTYLIMGLIVLPFTLISAF 398 (412)
T ss_dssp HHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhc-CcHHHHHHHHHHHHHHHHHhee
Confidence 9999999998877777776 47889999999999999999988 9999999988887776665543
No 222
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.97 E-value=1.5e-08 Score=99.15 Aligned_cols=148 Identities=19% Similarity=0.134 Sum_probs=113.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch----hH--h---HHHHHHHHHHh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP----GL--G---VLLVGRLLYGL 208 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~----~~--~---~l~~~r~l~G~ 208 (559)
-|++..++.+......+...++.+++..+.||+|||+.++++..++.+..+++.... .. | ..+++.++..+
T Consensus 300 aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~ 379 (485)
T KOG0569|consen 300 AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFII 379 (485)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999999999999988888776532 12 1 12333333333
Q ss_pred hhhh-hhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHH-HhhccCCc
Q 008615 209 GIGL-AMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGI-GMWSLPPS 286 (559)
Q Consensus 209 ~~g~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e~ 286 (559)
+.+. .-|...-+.+|.+|++.|..++++..+..-+..++-...-..+.+.. |= +.|++..+++++..+ ++..+|||
T Consensus 380 ~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~-g~-~~filF~i~~~~~~i~~~~~lPET 457 (485)
T KOG0569|consen 380 SFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI-GP-YVFILFVIPLAIFLIYLYRYLPET 457 (485)
T ss_pred hhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cc-hhhHHHHHHHHHHHHHHHHhCccc
Confidence 3222 45778888999999999999999999988888887777666665555 33 667777777766555 45679998
Q ss_pred h
Q 008615 287 P 287 (559)
Q Consensus 287 p 287 (559)
.
T Consensus 458 k 458 (485)
T KOG0569|consen 458 K 458 (485)
T ss_pred C
Confidence 5
No 223
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.96 E-value=3.7e-09 Score=119.97 Aligned_cols=139 Identities=20% Similarity=0.211 Sum_probs=120.5
Q ss_pred cccchh-HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAV-QLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~-~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
+|.+.. +.+++.+...++..++.+++|+++||+++|+++.++.++.+++.++..+..+++.++++.++.|++.+...+.
T Consensus 263 ~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 342 (1146)
T PRK08633 263 LGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVP 342 (1146)
T ss_pred hCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHH
Confidence 788888 9999999999999999999999999999999999999888888888888889998999999999999999999
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHH
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLM 276 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~ 276 (559)
..+++.+..|+++|++++++.+....+|.++++.+++.+.....++...|++.+.+.++.
T Consensus 343 ~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 343 LNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998888888776442125666676666555443
No 224
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.96 E-value=9e-09 Score=100.51 Aligned_cols=149 Identities=19% Similarity=0.139 Sum_probs=106.5
Q ss_pred hhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH
Q 008615 377 PSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV 456 (559)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 456 (559)
.......|.+.++.+.+. .+.++......++..++.++.|++.||+|||+.+..+.++..++.+.. . ..+.+.
T Consensus 17 ~~~~~~lp~l~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~-----~~~~~~ 89 (355)
T TIGR00896 17 TSVGPLLPQIRSALGMSF-SVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-S-----APGTAL 89 (355)
T ss_pred ccCcccHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-H-----hccHHH
Confidence 345567788889999887 889999999999999999999999999999999988877766655443 1 122332
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC--chhhHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG--AENIFLLFAAIAFLA 534 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g--~~~~~~~~~~~~~~~ 534 (559)
.+ ...+..++......+....+..|.+| ++|+++.++.+....+|..+++.+.+.+.+..+ |+..|.+.+++.++.
T Consensus 90 l~-~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 90 LF-AGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HH-HHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 22 22222222222223333356677776 689999999999999999999999998887653 666676665544433
No 225
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.96 E-value=2.8e-09 Score=97.26 Aligned_cols=132 Identities=17% Similarity=0.190 Sum_probs=104.1
Q ss_pred HHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchh
Q 008615 153 LYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGT 232 (559)
Q Consensus 153 ~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~ 232 (559)
.+.-..|.++.+.+.||+|||+.|..+++++++..++...+.+-..+.+.-|..-++..+.+.+.+.|..|.+|.+-|+.
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRat 470 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRAT 470 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhc
Confidence 34667888999999999999999999999999999988887654444444444444555667788999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCch
Q 008615 233 LISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPSP 287 (559)
Q Consensus 233 ~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p 287 (559)
..|.-....-+|.++.|+++ ...+. .--.+..+.+.++++..+...++|-.+
T Consensus 471 gvGtcSsmaRIggI~~p~iA-~~~e~--s~sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 471 GVGTCSSMARIGGIFSPVIA-MRAEL--STSLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred chhhhhhHHhhhhhhhhHHH-HHhcc--ceeehHHHHHHHHHHHHHHheeeeecc
Confidence 99999999999999999998 22222 344566777777777777777776544
No 226
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.95 E-value=2.3e-08 Score=99.03 Aligned_cols=169 Identities=16% Similarity=0.113 Sum_probs=116.4
Q ss_pred hhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhh----hcCCcchhhhh-HHHHHHHHHHHHHHHHhh
Q 008615 376 QPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVD----DLGRRPLLIGG-VCGIALSLLLLSAYYKIL 450 (559)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 450 (559)
+.....+.+.|++..|.+. ...+.+.....+..++..++.|+++| |+|||+.++.. .....+++.++.......
T Consensus 20 ~~l~~~~l~~yl~~lg~~~-~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~ 98 (477)
T TIGR01301 20 WALQLSLLTPYVQELGIPH-AWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIG 98 (477)
T ss_pred HHHHHHHHHHHHHHcCCCH-HHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhh
Confidence 3455667777888999877 88999999999999999999999999 59999988765 444445545544321100
Q ss_pred --------cCc-h---hHHHHHHHHHHHHhhcccccccceeecccCCccch--hhHHHHHHHHHHHHHHHHHHhhHHH--
Q 008615 451 --------GGF-P---LVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTR--GRGISLAVLTNFGSNAIVTFAFSPL-- 514 (559)
Q Consensus 451 --------~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~g~~~~~~~~g~~i~~~i~g~l-- 514 (559)
... . +..+..+.+.....+....|. .+++.|.+|+++| +.+.++.+....+|+.+++.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~-rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~ 177 (477)
T TIGR01301 99 HLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPC-RAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGL 177 (477)
T ss_pred hhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-HHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 000 1 122222223333333333444 4889999998765 5789999999999999999888764
Q ss_pred HHhc-------------CchhhHHHHHHHHHHHHHHHHhhccCCC
Q 008615 515 KELL-------------GAENIFLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 515 ~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
.+.+ +.+..|++.+++.+++.++..+..+|..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 178 YKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 2222 3466788888888888888888888754
No 227
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.95 E-value=2.2e-06 Score=84.59 Aligned_cols=116 Identities=5% Similarity=-0.073 Sum_probs=91.1
Q ss_pred chhHHHHHHHHHHHHHHHH-HHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc----h---------------------
Q 008615 141 SAVQLGLVVSGSLYGALLG-SILVYSIADFLGRKRELIIAAVLYALGALTTAYA----P--------------------- 194 (559)
Q Consensus 141 s~~~~g~~~s~~~l~~~i~-~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----~--------------------- 194 (559)
....+.++-+...+..++. .++.+++++|++|++++-+....+....+++++. +
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 4468999999888877777 9999999999999999988777777666666654 1
Q ss_pred ------hHhHHHHHHHHHHhhhhhhhh-hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhccc
Q 008615 195 ------GLGVLLVGRLLYGLGIGLAMH-GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQI 256 (559)
Q Consensus 195 ------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 256 (559)
+.|...+.-+...+-...... .-..+.+|.++.+|-.|..+++..+.++|.++++.+..++.
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333444555555555555 77889999999999999999999999999999999888866
No 228
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.92 E-value=4.7e-09 Score=98.96 Aligned_cols=118 Identities=23% Similarity=0.361 Sum_probs=91.4
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhh----hhchHHHHHH-HHHHHHHHHHHHHhchhHh---------------
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIAD----FLGRKRELII-AAVLYALGALTTAYAPGLG--------------- 197 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~~~~-~~~~~~i~~~~~~~~~~~~--------------- 197 (559)
+|+.....+.+--...+...+.+++.|..+| ||||||.++. +.+..+++.++.+++.++.
T Consensus 62 lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~ra 141 (498)
T KOG0637|consen 62 LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRA 141 (498)
T ss_pred cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHH
Confidence 6677777777777788888999999999999 5998877654 5555667777777765432
Q ss_pred --HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchh-hhhHHHHHHHHHHHHHHHhhhcc
Q 008615 198 --VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGT-LISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 198 --~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
.++++--+.=++.-.....+-+++.|....+++.+ +++.+.....+|..+|..+++++
T Consensus 142 i~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 142 IVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 34444455556666788889999999998777766 99999999999999999998853
No 229
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1.5e-08 Score=100.38 Aligned_cols=150 Identities=16% Similarity=0.056 Sum_probs=124.9
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhh
Q 008615 390 AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQ 469 (559)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (559)
..+++ .+-+++......+.+++.+.+|++.||+|.|+++..+.++.+++.++..+.... ....+++.-++.|+..
T Consensus 68 ~~ws~-~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~----~~~~~~~~R~lqGl~~ 142 (466)
T KOG2532|consen 68 YDWSS-TEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI----GFYLLLVLRFLQGLGQ 142 (466)
T ss_pred ecCCH-HHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh----cchhhHHHHHHhHHHH
Confidence 34444 678889999999999999999999999999999999999999998888876532 2224455555666555
Q ss_pred cccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh-cCchhhHHHHHHHHHHHHHHHHhhccC
Q 008615 470 ISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL-LGAENIFLLFAAIAFLAVLFIVRTVPE 544 (559)
Q Consensus 470 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (559)
....|....+...-.|+++|++..++.....++|.+++-++.|.+.+. .||...|++.+++.++..++.+++..+
T Consensus 143 g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 143 GVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred hHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 556677778899999999999999999999999999999999999998 999999999999988887766665543
No 230
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.91 E-value=1e-07 Score=90.88 Aligned_cols=135 Identities=18% Similarity=0.067 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 008615 144 QLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAE 223 (559)
Q Consensus 144 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 223 (559)
-.+.+.-+-.+...+..+++.+..+|+..+.=..++.+++.++.++.+++++.+.=+++-++.+++.|........+..
T Consensus 60 ~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 60 STGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred cchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 3445555666677777788888999988665566666688889999999999999999999999999988888888644
Q ss_pred cCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhcc
Q 008615 224 TCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSL 283 (559)
Q Consensus 224 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 283 (559)
.+++ ..++-+..+.+.+.++|+..-..+...-.+-|..+++...+.++..+..+++
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTTLGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5543 3578888889989999988766665521134778888777776665555443
No 231
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.91 E-value=2.2e-08 Score=97.91 Aligned_cols=148 Identities=24% Similarity=0.349 Sum_probs=118.9
Q ss_pred cc-cchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc-hhHhHHHH----HHHHHHhhhh
Q 008615 138 FN-LSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA-PGLGVLLV----GRLLYGLGIG 211 (559)
Q Consensus 138 ~~-~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~l~~----~r~l~G~~~g 211 (559)
.| .+....+.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+..++ ...++|+..+
T Consensus 237 ~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~ 316 (400)
T PF03825_consen 237 LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFG 316 (400)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHH
Confidence 55 567777888888888888999999999999999999999999999988888887 55444333 3456999999
Q ss_pred hhhhhhhhhhhccCCcccchhhhhHHHH-HHHHHHHHHHHhhhcccCCCC-----cchHHHhhhHHHHHHHHHHh-hccC
Q 008615 212 LAMHGAPLYIAETCPSQIRGTLISLKEL-FIVLGILLGYFVGSFQINAVG-----GWRYMYGLSAPLALLMGIGM-WSLP 284 (559)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~~-----~wr~~f~~~~~~~~~~~~~~-~~~~ 284 (559)
..+.....++.+..|++.|+++.+++.+ ..++|..+|..++|++.+..+ .|...+.+.+++.++..+++ ++++
T Consensus 317 ~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 317 LFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999876 478999999999999988762 34455666666666555544 3344
Q ss_pred C
Q 008615 285 P 285 (559)
Q Consensus 285 e 285 (559)
|
T Consensus 397 ~ 397 (400)
T PF03825_consen 397 P 397 (400)
T ss_pred C
Confidence 3
No 232
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.90 E-value=6.3e-07 Score=92.65 Aligned_cols=144 Identities=19% Similarity=0.245 Sum_probs=119.9
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh-hchHHHHHHHHHHHHHHHHHHHhchh--------HhHHHHHHHHHHh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF-LGRKRELIIAAVLYALGALTTAYAPG--------LGVLLVGRLLYGL 208 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~~~~~~i~~~~~~~~~~--------~~~l~~~r~l~G~ 208 (559)
+|.+......+...+....-+..+++|.++|+ +||++.++++.++..+|.++.+++.. ....+++-.+..+
T Consensus 18 lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~ 97 (654)
T TIGR00926 18 LGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIAL 97 (654)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHh
Confidence 78888999999999999999999999999995 69999999999999999988877421 2346677888899
Q ss_pred hhhhhhhhhhhhhhccCCcc---cchhhhhHHHHHHHHHHHHHHHhhhcccCCC------CcchHHHhhhHHHHHHHHHH
Q 008615 209 GIGLAMHGAPLYIAETCPSQ---IRGTLISLKELFIVLGILLGYFVGSFQINAV------GGWRYMYGLSAPLALLMGIG 279 (559)
Q Consensus 209 ~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~------~~wr~~f~~~~~~~~~~~~~ 279 (559)
|.|+.-++..+...|.++++ +|...+.++..+.++|.++++++..++.+.. .+|...|.+.++..++.+++
T Consensus 98 G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 98 GTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred hccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999754 3667888999999999999999888875321 26999999998888877665
Q ss_pred hh
Q 008615 280 MW 281 (559)
Q Consensus 280 ~~ 281 (559)
.+
T Consensus 178 f~ 179 (654)
T TIGR00926 178 FM 179 (654)
T ss_pred HH
Confidence 54
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.84 E-value=3e-08 Score=94.87 Aligned_cols=139 Identities=37% Similarity=0.577 Sum_probs=115.3
Q ss_pred cccch--hHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchh--HhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSA--VQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPG--LGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~--~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~--~~~l~~~r~l~G~~~g~~ 213 (559)
++.+. .+.++..+.+.++..++.++.|.++||+|||+.++.+.....++.+++++..+ .+.+++.|+++|++.+..
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 111 (338)
T COG0477 32 LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGL 111 (338)
T ss_pred cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHH
Confidence 44444 58899999999999999999999999999999988888776677777777776 899999999999999999
Q ss_pred hhhhhhhhhccCCc-ccchhhhhHHHH-HHHHHHHHHHHhhhcccCC-CCcchHHHhhhHHHHHHH
Q 008615 214 MHGAPLYIAETCPS-QIRGTLISLKEL-FIVLGILLGYFVGSFQINA-VGGWRYMYGLSAPLALLM 276 (559)
Q Consensus 214 ~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~-~~~wr~~f~~~~~~~~~~ 276 (559)
.+...+++.|++++ ++|+...+.... ...+|..+++.+++.+... ..+||+.|++........
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 112 LPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999999987 678999998888 5888889998777766543 228999776666555443
No 234
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.80 E-value=2.4e-07 Score=94.05 Aligned_cols=118 Identities=14% Similarity=0.111 Sum_probs=95.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh-----chhHhHHHHHHHHHHhhhhhhhh
Q 008615 141 SAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY-----APGLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 141 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~-----~~~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+....+++.+...++..++.+++++++||+|+|+.+.++.++..++.+...+ ..+.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777899999999999999999999999888877766655432 34567777788899999999999
Q ss_pred hhhhhhhccCC-------cccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 216 GAPLYIAETCP-------SQIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 216 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
...+++.|..+ .++.|..++.......+|..+++.+.+++.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999966 34456689999999999999999998887653
No 235
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.79 E-value=7.9e-08 Score=99.03 Aligned_cols=140 Identities=16% Similarity=0.111 Sum_probs=114.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccc
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPI 475 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (559)
....+...+..++.++|.++.|.++||+|||++++.+.++..++.+..++ ..++..+.++-++.|++..+...+
T Consensus 118 ~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~------a~~~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 118 TLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAF------APNYWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred hHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHH------hCcHHHHHHHHHHHHhhccchhHH
Confidence 56778888889999999999999999999999999999999888866664 345556666667777777777777
Q ss_pred cceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 476 SWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 476 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
...+..|.++++.|+.+..+ ......++.+++...+++.. +|++.+++.....++..++ +++.+|.
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es 257 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPES 257 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcC
Confidence 88999999999999999999 77888888999998888877 7888888777776666554 4445454
No 236
>PRK09669 putative symporter YagG; Provisional
Probab=98.79 E-value=2.6e-07 Score=93.07 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=92.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh--chhHhHHHHHHHHHHhhhhhhhhhhhhh
Q 008615 143 VQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY--APGLGVLLVGRLLYGLGIGLAMHGAPLY 220 (559)
Q Consensus 143 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 220 (559)
...+.+.....+...++.+++++++||+|+|+.+..+.++.+++.+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888899999999999999999999888776654443332 3577778888899999999999999999
Q ss_pred hhccCCc-------ccchhhhhHHHHHHHHHHHHHHHhhhcccCCC
Q 008615 221 IAETCPS-------QIRGTLISLKELFIVLGILLGYFVGSFQINAV 259 (559)
Q Consensus 221 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 259 (559)
++|..+. ++.|...+.......+|..+|+.+++.+.+..
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~ 389 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWV 389 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9998862 33466788888899999999999998876644
No 237
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.79 E-value=4.8e-08 Score=93.97 Aligned_cols=147 Identities=20% Similarity=0.142 Sum_probs=108.2
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhh
Q 008615 391 GFSAAADATRVSVVIGVFKLVMTWIAVAKVDD-LGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQ 469 (559)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (559)
|+++ .++......+....-+..+++||++|| +|+|+.++.+.+++.++.++++... ........+.+ .+..+..
T Consensus 57 g~~~-~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~---~~~~~gl~i~L-~~I~iG~ 131 (498)
T COG3104 57 GFDE-THATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISS---VSGPGGLYIGL-ALIIVGT 131 (498)
T ss_pred CcCh-HhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc---cccccHHHHHH-HHHHhcc
Confidence 3777 555555555555556778899999999 5999999999999999999888521 01122223333 3333444
Q ss_pred cccccccceeecccCCcc--chhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHhhc
Q 008615 470 ISFGPISWLMVSEIFPLR--TRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVRTV 542 (559)
Q Consensus 470 ~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 542 (559)
+.+=+....++.|++|++ .|-.+.++..+..++|+.++|.+.+++.++.||+..|...++-..++.+..++..
T Consensus 132 Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 132 GLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred ccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 555566668889998854 3666778888889999999999999999999999999998888888777665544
No 238
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.79 E-value=9.9e-08 Score=84.07 Aligned_cols=143 Identities=19% Similarity=0.167 Sum_probs=106.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHH-HHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYA-LGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~-i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
||+|+...+-+.+.-....++.+++.|.++||+|++.+.+.+..+.. ++-.+..+ +++.=+.+..+.|+........
T Consensus 295 fGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcs 372 (459)
T KOG4686|consen 295 FGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACS 372 (459)
T ss_pred hCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999999999999999999987776554443 33333333 3344455667788876655554
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH---HhhhHHHHHHHHHHhhc
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM---YGLSAPLALLMGIGMWS 282 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~---f~~~~~~~~~~~~~~~~ 282 (559)
....++...|+++.|++.+..+...++|..+-|++++.+.+..+++-+. |.+.+.+++....+.+.
T Consensus 373 lWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~ 441 (459)
T KOG4686|consen 373 LWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFY 441 (459)
T ss_pred HhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhh
Confidence 5667778889999999999999999999999999999999876444443 33444444444333343
No 239
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.76 E-value=6.8e-08 Score=96.81 Aligned_cols=116 Identities=21% Similarity=0.240 Sum_probs=104.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch--hHhHHHHHHHHHHhhhhhhhhhhhhh
Q 008615 143 VQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP--GLGVLLVGRLLYGLGIGLAMHGAPLY 220 (559)
Q Consensus 143 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~ 220 (559)
...+.+..+..++..++.+++++++||+|+|+.+..+.++.+++.++..+.+ +.+.+++.-++.|++.+...+...++
T Consensus 260 ~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~ 339 (428)
T PF13347_consen 260 GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAM 339 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccc
Confidence 5678888899999999999999999999999999999999999999988886 99999999999999999999999999
Q ss_pred hhccCCc-------ccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 221 IAETCPS-------QIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 221 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
++|..+. ++.|..++.......+|..+++.+.+.+.+.
T Consensus 340 ~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~ 384 (428)
T PF13347_consen 340 LADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLAL 384 (428)
T ss_pred cccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999873 3458889999999999999999988876644
No 240
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.75 E-value=4.4e-07 Score=84.86 Aligned_cols=157 Identities=12% Similarity=-0.021 Sum_probs=115.7
Q ss_pred hHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 378 SVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
..-...|.+.+.+..+. .+++++......+..+.++..+++.+|+|.|+-++.++.++++++.++..... ...+..
T Consensus 31 l~diLip~l~~~f~ls~-~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~---~~~y~~ 106 (422)
T COG0738 31 LNDILIPHLKEVFDLTY-FEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS---SKSYGF 106 (422)
T ss_pred cchhhHHHHHHHhCccH-HHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh---hhhHHH
Confidence 34445677777777777 89999999999999999999999999999999999999999999988864322 222333
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh-------------------c
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL-------------------L 518 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~-------------------~ 518 (559)
.....+..+.+..........++..+.+++....-+.+.+.++.+|++++|.+.+.+..+ -
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~ 186 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADAS 186 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHH
Confidence 333223333333333444557888888888888899999999999999999999998873 1
Q ss_pred CchhhHHHHHHHHHHHHHHH
Q 008615 519 GAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 519 g~~~~~~~~~~~~~~~~~~~ 538 (559)
.++.+|...+.++++..+..
T Consensus 187 ~v~~pYl~~~~~lvll~v~~ 206 (422)
T COG0738 187 SVQFPYLILAGLLVLLAVLI 206 (422)
T ss_pred hhhhHHHHHHHHHHHHHHHH
Confidence 25566776666665555433
No 241
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.74 E-value=1.8e-07 Score=83.86 Aligned_cols=167 Identities=18% Similarity=0.107 Sum_probs=110.3
Q ss_pred HhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc
Q 008615 372 QITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILG 451 (559)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (559)
.....+.+..|.|.+-++.+++. .+...+.....++..+| ++.|.+.|++|.+.++.++.+...++...+.......-
T Consensus 14 ~~Gt~Y~Fs~yS~~Lk~~l~~sq-~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i 91 (250)
T PF06813_consen 14 CSGTTYTFSAYSPQLKSRLGYSQ-SQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRI 91 (250)
T ss_pred hcCcccchhhhhHHHHHHhCCCH-HHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 33455678889999999999998 78888888888888764 88899999999999999999999999888776543221
Q ss_pred C-chhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHH
Q 008615 452 G-FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAI 530 (559)
Q Consensus 452 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~ 530 (559)
. .+.+.+....+..+.....+.........+.+| ++||++.|+.-....+++++...+...+.+. +....+++.+..
T Consensus 92 ~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~ 169 (250)
T PF06813_consen 92 PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVL 169 (250)
T ss_pred CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHH
Confidence 1 233333333333222222222222233446778 6899999999999999988888887777655 322333344444
Q ss_pred HHHHHHHHHhhc
Q 008615 531 AFLAVLFIVRTV 542 (559)
Q Consensus 531 ~~~~~~~~~~~~ 542 (559)
..+..++...++
T Consensus 170 ~~~v~l~~~~~v 181 (250)
T PF06813_consen 170 PAVVCLVAMFFV 181 (250)
T ss_pred HHHHHHHHhhhe
Confidence 333333333333
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.70 E-value=3.3e-07 Score=84.32 Aligned_cols=178 Identities=25% Similarity=0.204 Sum_probs=135.0
Q ss_pred cchhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-c
Q 008615 93 AFSWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-G 171 (559)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-G 171 (559)
-|+.+..|.+.+...+..+.++...++ +|.+..| -|+|..+.|++.+...+......+....+++|. .
T Consensus 204 vw~~~~aW~vtLfmGlqS~~~Y~~~~W----LP~ili~-------~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n 272 (395)
T COG2807 204 VWRSPLAWQVTLFMGLQSLLYYIVIGW----LPAILID-------RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKN 272 (395)
T ss_pred cccCchhHHHHHHHHhhHHHHHHHHHH----HHHHHHH-------cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 344444555555555555555555555 3444445 799999999999999999999999999999975 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCccc-chhhhhHHHHHHHHHHHHHHH
Q 008615 172 RKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQI-RGTLISLKELFIVLGILLGYF 250 (559)
Q Consensus 172 rr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~ 250 (559)
+|+..+....++.++.+.+.+.+.-..++. -++.|+|.|..++....++.+..+..+ -++-.+..+....+=..+||.
T Consensus 273 ~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 273 QRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 677777888888888888877765433333 499999999999999999998886544 445556666666666778999
Q ss_pred hhhcccCCCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 251 VGSFQINAVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 251 l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
+.|++-|..++|+..++..+...+++.+.-+.
T Consensus 352 l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~ 383 (395)
T COG2807 352 LFGFLHDATGSWSAPLVLLALATLLMLIFGLR 383 (395)
T ss_pred hHhHHHHhcCChHHHHHHHHHHHHHHHHHHhh
Confidence 99999998889999999888888776665554
No 243
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.70 E-value=2.3e-07 Score=81.06 Aligned_cols=342 Identities=15% Similarity=0.150 Sum_probs=174.0
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
++....++|.+.-+.+-...++..+.|.|+|+-|||+.-+.-.+.+.+++ ++-.++.|-.++++|++-|+..+..+...
T Consensus 67 YgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFSaF 145 (454)
T KOG4332|consen 67 YGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFSAF 145 (454)
T ss_pred cCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHHHH
Confidence 67778889988888888889999999999999999997554443333322 23457889999999999999999888877
Q ss_pred hhh-hhccCCcccchhhhhHHH--------HHHHHHHHHHHHhhhcccCCCC-cchHHHhhhHHHHHHHHHHhhc-cCCc
Q 008615 218 PLY-IAETCPSQIRGTLISLKE--------LFIVLGILLGYFVGSFQINAVG-GWRYMYGLSAPLALLMGIGMWS-LPPS 286 (559)
Q Consensus 218 ~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~l~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~-~~e~ 286 (559)
-++ +.|.-+ +|+.---+.. .+..+-.+++.+.+..+.+... |--.+|-..+.+..+...+.+- .-|.
T Consensus 146 EsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~EN 223 (454)
T KOG4332|consen 146 ESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSEN 223 (454)
T ss_pred HHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhc
Confidence 665 455542 2332222211 2233334455555555554431 4444555544443333222221 1110
Q ss_pred hHHHHHhhccCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHH
Q 008615 287 PRWLLLRAVQGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGG 366 (559)
Q Consensus 287 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (559)
- +++.+.+..+.+.+ ...+.+..+. ++.+.-.
T Consensus 224 y---------------gdps~~kdlltqf~------------------------------gaa~aiaSD~---ki~LLG~ 255 (454)
T KOG4332|consen 224 Y---------------GDPSENKDLLTQFK------------------------------GAARAIASDE---KIALLGA 255 (454)
T ss_pred c---------------CChhhhHHHHHHhh------------------------------HhHHHHhcch---HHHHHHH
Confidence 0 01111111111111 0112222222 2222222
Q ss_pred HHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc--chhhhhHHHHHHHHHHHH
Q 008615 367 LVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR--PLLIGGVCGIALSLLLLS 444 (559)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~~~~~~~~ 444 (559)
+........+..+..|.|.+-.+-.. .--|.++..+.+..++|+-+..++..|-..| ..+.+.+.+..+.+.+..
T Consensus 256 iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpi 332 (454)
T KOG4332|consen 256 IQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPI 332 (454)
T ss_pred HHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHH
Confidence 22333333333344455543211111 2356677777788888888887776654433 334444444444433333
Q ss_pred HHHHhh--cCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh--cCc
Q 008615 445 AYYKIL--GGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL--LGA 520 (559)
Q Consensus 445 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~--~g~ 520 (559)
...... ...+...++.++++-.+.+..+. ...-+-.+..|.+.|++.+-+...--++...++-+.. =.+. .+.
T Consensus 333 lt~~vsP~kes~~~s~i~F~~~E~cvGlfwP-SimkmRsqyIPEearstimNfFRvPLnifvClvLynl--h~~~~p~~t 409 (454)
T KOG4332|consen 333 LTSSVSPSKESPSESLIGFCLFEACVGLFWP-SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNL--HVDAFPTTT 409 (454)
T ss_pred HHhccCCCcCCchHHHHHHHHHHHHHhhcch-HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheec--ccccCcccc
Confidence 222111 11233345566666666655544 4445667788988888665554333333222221110 0111 233
Q ss_pred hhhHHHHHHHHHHHHH
Q 008615 521 ENIFLLFAAIAFLAVL 536 (559)
Q Consensus 521 ~~~~~~~~~~~~~~~~ 536 (559)
+..|-++.+...++.+
T Consensus 410 r~mf~icS~~~~~a~i 425 (454)
T KOG4332|consen 410 RNMFGICSAFLFVASI 425 (454)
T ss_pred chhhhhhHHHHHHHHH
Confidence 4566666665555544
No 244
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.65 E-value=2.2e-07 Score=84.36 Aligned_cols=370 Identities=15% Similarity=0.152 Sum_probs=216.4
Q ss_pred cccchhHHH-HHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhh
Q 008615 138 FNLSAVQLG-LVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHG 216 (559)
Q Consensus 138 ~~~s~~~~g-~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 216 (559)
.|++..|+. -+.=...-.+.+.-++.=.+.|..-.|+++++-.+...+..++.-+.++.+.+-+.-++.|...+ ...+
T Consensus 36 ~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIA 114 (433)
T KOG3810|consen 36 KNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIA 114 (433)
T ss_pred CCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHh
Confidence 577777653 22333344556666666779999999999988877788888888899999999999999999776 5777
Q ss_pred hhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCC-cchHHHhhhHHHHHHHHHHhhccCCchHHHHHhhc
Q 008615 217 APLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVG-GWRYMYGLSAPLALLMGIGMWSLPPSPRWLLLRAV 295 (559)
Q Consensus 217 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~-~wr~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~ 295 (559)
-++++-+..+++++.++.+...+..-.|..+|..++-.++.... ++...=++......+..++.+++|..+|-+.-+++
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~ 194 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRL 194 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcc
Confidence 88999999999999999999999999999999999888776541 23333334444444455566777776653333211
Q ss_pred cCCCchhhhHHHHHHHHHhhcCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhC
Q 008615 296 QGKGSLQEYKEQAISALGKLRRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITG 375 (559)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (559)
+.+ ....+....++.. ...+...... ..-...+.+..++|.....-+. +.....+
T Consensus 195 ~~~-----------~~v~~~e~~~~~~-~~~~~l~~~~---------~~l~~~l~~~y~np~ll~WSlW----wAl~scg 249 (433)
T KOG3810|consen 195 EDK-----------ISVGDLEEMNPQA-SYMSYLRGAF---------VLLWRDLQECYSNPRLLKWSLW----WALASCG 249 (433)
T ss_pred ccc-----------ceeccchhcCccc-hhhHHHHHHH---------HHHHHHHHHHhcCchhhhhHHH----HHHhhch
Confidence 110 0000000000000 0000000000 0001124455666654433322 2233334
Q ss_pred hhhHHHhHHHHHHHcCCC-CchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCch
Q 008615 376 QPSVLYYAGPILQSAGFS-AAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFP 454 (559)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (559)
++-+.+|...+.++..-. ....-|..=++..+.+.++.+..|.+.-++.|..-+.++......+.+++.. ....+.
T Consensus 250 ~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m---~~t~~I 326 (433)
T KOG3810|consen 250 YYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIM---AQTQHI 326 (433)
T ss_pred hHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhh---hcccce
Confidence 445777777777665322 1123445555666777788888888876666654433333322222222221 123445
Q ss_pred hHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-----------chhh
Q 008615 455 LVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-----------AENI 523 (559)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-----------~~~~ 523 (559)
|+..+...++...+........ ..+++....+.-|...|+..++.-+-..+...+ ..|..| +..-
T Consensus 327 w~~Ya~yvlfr~~y~l~itiA~-~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Y 402 (433)
T KOG3810|consen 327 WVCYAGYVLFRVIYQLTITIAT-FQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSY 402 (433)
T ss_pred ehhhhhHHHHHhhHhhhhhHHH-HHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeeh
Confidence 6666666666666655544333 333444466778899999887765554444433 334222 3345
Q ss_pred HHHHHHHHHHHHHHHHh
Q 008615 524 FLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 524 ~~~~~~~~~~~~~~~~~ 540 (559)
|++.+++.+++..+.+.
T Consensus 403 f~v~~~i~~~~~~~~~~ 419 (433)
T KOG3810|consen 403 FIVLGVIFLIGFGIEYL 419 (433)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77788887777665443
No 245
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.65 E-value=3.3e-06 Score=82.22 Aligned_cols=121 Identities=25% Similarity=0.360 Sum_probs=103.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch--hHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP--GLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++.-+.+ +.+.+++..++.++|.+...+
T Consensus 267 lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 267 LGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhcccc
Confidence 566777788888888888888899999999999999999999999999999988865 788888999999999999999
Q ss_pred hhhhhhhccCCc-------ccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 216 GAPLYIAETCPS-------QIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 216 ~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
...++++|..+- +.-|...+......-+|.+++..+.++.+..
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~ 396 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGA 396 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987752 3447778888888888998888777776543
No 246
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.65 E-value=4.8e-06 Score=76.83 Aligned_cols=351 Identities=13% Similarity=-0.005 Sum_probs=184.4
Q ss_pred HHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhh-----hhchHHHHH-HHHH
Q 008615 108 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIAD-----FLGRKRELI-IAAV 181 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d-----r~Grr~~~~-~~~~ 181 (559)
+-.++.|.-.+... .+|.+.+. -|+|.++.+...-++ .. -.--++|.++.| |+||||.-+ -+..
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~a-------k~vSyt~~a~fS~ay-~P-~sLKllWaPiVDs~y~k~~GrrksWvvp~q~ 107 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQA-------KGVSYTSQAIFSFAY-WP-FSLKLLWAPIVDSVYSKRFGRRKSWVVPCQY 107 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcC-------CCcchhhhhhhhhhh-hH-HHHHHHHHhhhHHHHHHhhccccceeeehHH
Confidence 33577777777776 67766653 477777766553332 12 234678999999 999988543 2333
Q ss_pred HHHHHHHHHHh-----------chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHH
Q 008615 182 LYALGALTTAY-----------APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYF 250 (559)
Q Consensus 182 ~~~i~~~~~~~-----------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~ 250 (559)
+.+...++.+. .++...+...-++.-+.++..-.+.-.+...+..+++.|.+......+.+.|.+++..
T Consensus 108 llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ 187 (510)
T KOG3574|consen 108 LLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNV 187 (510)
T ss_pred HHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcc
Confidence 33333333332 1233344445566667777777778888888888999888888888888888888776
Q ss_pred hhhcccCC------CCcch---------HHHhhhHHHHHHHHHHhhccCCchHHHHHhhccCCCchhhhHHHHHHHHHhh
Q 008615 251 VGSFQINA------VGGWR---------YMYGLSAPLALLMGIGMWSLPPSPRWLLLRAVQGKGSLQEYKEQAISALGKL 315 (559)
Q Consensus 251 l~~~l~~~------~~~wr---------~~f~~~~~~~~~~~~~~~~~~e~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (559)
+.-.+.+. ..+|. ...++.+.+.++.-.+..+..+++.. ...+|
T Consensus 188 ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~-------------~~~~e-------- 246 (510)
T KOG3574|consen 188 VFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKENDE-------------SVDEE-------- 246 (510)
T ss_pred eeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCCch-------------hhhhh--------
Confidence 65444331 01232 12344455555554444444332210 00000
Q ss_pred cCCCCCCchhhHHHHHHHHHhhhccccccccccchhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCc
Q 008615 316 RRRPPGDKLSERQIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAA 395 (559)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (559)
. ........+-++++++-|..+.+.......=+.+. .--...+.-+-+.|.+.
T Consensus 247 ----------------~------~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~----a~da~t~LkLle~Gv~k- 299 (510)
T KOG3574|consen 247 ----------------L------ELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQ----AADALTSLKLLEHGVPK- 299 (510)
T ss_pred ----------------h------hcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhh----hhhhccchHHHHcCCCh-
Confidence 0 00001111235666776665554443333322221 23333445566788887
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhc------CCcchhhhhHHHHHHHHHHHHHHHHhhcC----chhHHHHHHH---
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDL------GRRPLLIGGVCGIALSLLLLSAYYKILGG----FPLVAVSALL--- 462 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--- 462 (559)
...++...+..-..++.....|++...- -|+-...+... ....++.+....... -+....+..+
T Consensus 300 e~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~---~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y 376 (510)
T KOG3574|consen 300 EELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGG---LVQTALVWWTPTLGHSDGTFPRGYYILLITSY 376 (510)
T ss_pred hHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHH---HHHHHHHhhhcccccCCCceeechHHHHHHHH
Confidence 5555544444444444444444443311 11111122111 111222221111111 1111111111
Q ss_pred HHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Q 008615 463 LYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG 519 (559)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 519 (559)
.+..++.-......++..+.+.++...|+.|.+.|+..++|+-.-..+..++.|..+
T Consensus 377 ~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 377 AFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 111111111112233677888899999999999999999999888888888887644
No 247
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.64 E-value=5.5e-06 Score=81.79 Aligned_cols=350 Identities=12% Similarity=-0.013 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH-Hh-------chhHhHHHHHHHHHHhhhhhhhhhhh
Q 008615 147 LVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT-AY-------APGLGVLLVGRLLYGLGIGLAMHGAP 218 (559)
Q Consensus 147 ~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~-~~-------~~~~~~l~~~r~l~G~~~g~~~~~~~ 218 (559)
++.-...+...+..+..-.+..|+..|.=++.++++..+..++. .+ ...++..++.-++.|++.+.......
T Consensus 49 ~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~~~~~~~~f~~~~~~v~~~g~~~~~~q~s~~ 128 (437)
T TIGR00939 49 YYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKVQTSETGFFVTTMASVVIINSGMALLQGSLF 128 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeeecCCcchHHHHHHHHHHHHHhhhhhhcccch
Confidence 33334444555555555566666664322333333222222221 11 12567777788899999998888888
Q ss_pred hhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhc----ccCCC-Ccch--HHHhhhHHHHHHHHHHhhccCCchHHH-
Q 008615 219 LYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSF----QINAV-GGWR--YMYGLSAPLALLMGIGMWSLPPSPRWL- 290 (559)
Q Consensus 219 ~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~----l~~~~-~~wr--~~f~~~~~~~~~~~~~~~~~~e~p~~~- 290 (559)
.+.+ .+|++ .+..+..+.+++++++.++--. ..+.. ..++ .-|.+..++.+++++....++..|...
T Consensus 129 gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii~~a~~~~~~~~~~~a~~YF~~a~~v~l~~i~~~~~l~k~~~~~~ 203 (437)
T TIGR00939 129 GLAG-VFPST----YSSAVMSGQGLAGVLTSLAMILVKASGNDSHGLKKSALGYFGTPCVVQLICIVCYLLLPKLPFARY 203 (437)
T ss_pred hhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHHHHHhcCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 8766 56654 3555555556655555544221 11210 0122 224445555555666666677776422
Q ss_pred -HHhhccCCCchhhhHHHHHHHHHhhcCCCC----CCchhhH-HHHHHHHHhhhccccccccccchhhcccCchhHHHHH
Q 008615 291 -LLRAVQGKGSLQEYKEQAISALGKLRRRPP----GDKLSER-QIEDTLVSLKSSYTDEKSEGSFLEVFQGPNLKAFIIG 364 (559)
Q Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (559)
.++.+..+... ++.++......+.++ .++.+.. +.....+......++.+.+.+.+.++|+ .|...+.
T Consensus 204 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~kk--i~~~~~~ 277 (437)
T TIGR00939 204 YLQKKLDKGAGE----DETKGELRSKAEQNGIPHGGDQPSPTLVLDWEKEPESPDEPQKPLKTSVWVVFTK--VWLLAFS 277 (437)
T ss_pred HHHhhccccccc----ccccccccccccccccccccccccccccccccccccCCccchhcccCcHHHHHHH--HHHHHHH
Confidence 21111000000 000000000000000 0000000 0000000000001111223445555553 3444544
Q ss_pred HHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-chhhhhHHHHHHHHHHH
Q 008615 365 GGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRR-PLLIGGVCGIALSLLLL 443 (559)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-~~~~~~~~~~~~~~~~~ 443 (559)
.++.++.....+..+...... .+.+.++....-.....++++.++|+.+..+.. .-++| +.+.+..++=.+..-++
T Consensus 278 vf~~F~vTL~vFPgv~~~i~~--~~~~~~~~~~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf 354 (437)
T TIGR00939 278 VVFVFTVTLSVFPAITTAVTS--SGLGLSNWFYPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLF 354 (437)
T ss_pred HHHHHHHHHHhcCceEEEeec--cCCCCCccHHHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHH
Confidence 445554443333332222111 011222212455777888899999998765432 11222 13322222222222222
Q ss_pred HHHHHhhc------CchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHh
Q 008615 444 SAYYKILG------GFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFA 510 (559)
Q Consensus 444 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i 510 (559)
.++...+. -.+-+......+..+...+........+..+.+++++|..+..+...+..+|-.+|+.+
T Consensus 355 ~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 355 LLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHhcCCccccCCeeecccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22211100 01222233334444444444555556777888888899888888888877777777664
No 248
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.63 E-value=1.4e-06 Score=89.39 Aligned_cols=140 Identities=17% Similarity=0.097 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccc
Q 008615 398 ATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISW 477 (559)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (559)
.+++.....++..++.++.|+++|++|||+.+..+.+...++.++..... ....+...-++.+...++...+..
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~------~~~~l~~GR~l~G~g~G~~~~~~p 164 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP------SWYQLIVGRILTGLGVGGASVLAP 164 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHhccchhhhhhcch
Confidence 37999999999999999999999999999999999999999988887632 333333333444444444445556
Q ss_pred eeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhc--CchhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 478 LMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELL--GAENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 478 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
.+.+|..|++.||...+..+....+|..++ .+.+....+. +|+..+.+..+.+++..+. .++.||.
T Consensus 165 iy~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pes 232 (513)
T KOG0254|consen 165 VYISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPES 232 (513)
T ss_pred hhHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCC
Confidence 899999999999999999998888776666 6666666553 7876666666666666655 6666654
No 249
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.61 E-value=3.4e-07 Score=92.34 Aligned_cols=147 Identities=17% Similarity=0.158 Sum_probs=119.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc----------hhHhHHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA----------PGLGVLLVGRLLYG 207 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~----------~~~~~l~~~r~l~G 207 (559)
+|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+...+. ++.+.++..-++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 89999999999999999999999999999999999999999999999888665321 33445556678999
Q ss_pred hhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCc-----chHHHhhhH---HHHHHHHHH
Q 008615 208 LGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGG-----WRYMYGLSA---PLALLMGIG 279 (559)
Q Consensus 208 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~-----wr~~f~~~~---~~~~~~~~~ 279 (559)
++.+..+.....++.+..|+++++...++..+..++|..+++.+++.+.+.. | .+..+++.. +..++.+..
T Consensus 363 ~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~-g~~~~~~~~~~~~i~i~~~~~l~~l~~ 441 (468)
T TIGR00788 363 VLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETI-GITCDNSNNLWLLILGHSLAPLLPLPL 441 (468)
T ss_pred HHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCcccccchHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999887655 3 444443333 333333334
Q ss_pred hhccCC
Q 008615 280 MWSLPP 285 (559)
Q Consensus 280 ~~~~~e 285 (559)
.+++|+
T Consensus 442 ~~llP~ 447 (468)
T TIGR00788 442 LHLLPR 447 (468)
T ss_pred HHhCCC
Confidence 456775
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.59 E-value=2e-07 Score=92.71 Aligned_cols=146 Identities=12% Similarity=0.031 Sum_probs=113.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccc
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPI 475 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (559)
.+.+...+.+.++.+++.+.++.+.||++-.+.+....++ ..++.+.... ..+...+++.-++.|++..+..|.
T Consensus 81 ~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~----w~~~~~~~~~--~~s~~~~ialr~llGl~es~~wP~ 154 (495)
T KOG2533|consen 81 NQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGIL----WGLFGFLTAA--VHSFPGLIALRFLLGLFESGGWPG 154 (495)
T ss_pred hhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHH----HHHHHHHHHH--HhhhHHHHHHHHHHHHHhcccchH
Confidence 6788899999999999999999999999944444333332 2222221111 234555666677777777777787
Q ss_pred cceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH------hcCchhhHHHHHHHHHHHHHHHHhhccCCCC
Q 008615 476 SWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE------LLGAENIFLLFAAIAFLAVLFIVRTVPETKG 547 (559)
Q Consensus 476 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (559)
...++..-+.+++|+.-+|+..+...+|+++++.+...+.. ..||++.|++-+++.++..+++++++|+...
T Consensus 155 ~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 155 VVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChh
Confidence 77899999999999999999999999999999999887643 4689999999999999999888888876433
No 251
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.53 E-value=5.4e-08 Score=93.74 Aligned_cols=144 Identities=19% Similarity=0.224 Sum_probs=130.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGA 217 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 217 (559)
.+..+...|........+-.+.-++.+++..|+|+-+++.+++.+..+=.+..+..+|.|..+..-+++|+..+..+.+.
T Consensus 401 ~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~ 480 (618)
T KOG3762|consen 401 LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAI 480 (618)
T ss_pred cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHH
Confidence 56667777888888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCcccchhhhhHHH-HHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 218 PLYIAETCPSQIRGTLISLKE-LFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 218 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
.+|+++..|++-|..+-++.+ ...++|-.+|.++||.+...+ +-|..|++.++.+++.+++...
T Consensus 481 ~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-g~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 481 ISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-GARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-hhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998865 456889999999999999888 8899999999888887666544
No 252
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.51 E-value=3.1e-06 Score=83.70 Aligned_cols=185 Identities=19% Similarity=0.129 Sum_probs=128.2
Q ss_pred hhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHH----HHHHHHHHHHHHHHhhhcCCcchhhhhH
Q 008615 358 LKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVI----GVFKLVMTWIAVAKVDDLGRRPLLIGGV 433 (559)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 433 (559)
.+......++..+.............+......+.......+...... ++..++.....|.++||+|||..+....
T Consensus 20 ~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~~~~ 99 (463)
T KOG2816|consen 20 MRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLLLPL 99 (463)
T ss_pred hhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHHHHH
Confidence 344444444555555444433444444333333333223344444444 6788889999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHH
Q 008615 434 CGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSP 513 (559)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~ 513 (559)
+...+..+.+.+. .++.++ ..-..+.+. .......++.++....+.|....|+.+.....+..++|.+.+.
T Consensus 100 ~~~~l~~~~~~~~-------~~~~~~-~~~l~g~~~-~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~ 170 (463)
T KOG2816|consen 100 FGTILPALCLLFQ-------GYWFFL-LLGLSGGFS-AIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGY 170 (463)
T ss_pred HHHHHhHHHHHHH-------HHHHhh-hcccccchh-hhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 7777766666542 132222 222222222 2334556889999999999999999999999999999999999
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCCHH
Q 008615 514 LKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLSLE 551 (559)
Q Consensus 514 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (559)
+....|+..++.+..+..++..+...+++||+..++.+
T Consensus 171 ~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~ 208 (463)
T KOG2816|consen 171 LVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKER 208 (463)
T ss_pred HHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccc
Confidence 99999999999999999999999999999987655443
No 253
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.48 E-value=9.7e-06 Score=76.78 Aligned_cols=144 Identities=22% Similarity=0.203 Sum_probs=120.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhh-hhchHHHHHHHHHHHHHHHHHHHh---chhHhHHHHHHHHHHhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIAD-FLGRKRELIIAAVLYALGALTTAY---APGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d-r~Grr~~~~~~~~~~~i~~~~~~~---~~~~~~l~~~r~l~G~~~g~~ 213 (559)
||++..|...++..+..|..++....|++.. |.++|+.-.+|+.+..++..+..+ ..+.+.+...-++.|++.|..
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f 318 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLF 318 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHH
Confidence 8999999999999999999999999999888 678888888888887777666444 467889999999999999999
Q ss_pred hhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC---------CCcchHHHhhhHHHHHHHHHHhh
Q 008615 214 MHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA---------VGGWRYMYGLSAPLALLMGIGMW 281 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---------~~~wr~~f~~~~~~~~~~~~~~~ 281 (559)
.....+...+...+++.|..+|.+.....++..+|..+|+.+.|. ..+|-.+|.+.++..++.+++..
T Consensus 319 ~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~ 395 (403)
T PF03209_consen 319 TVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLG 395 (403)
T ss_pred HHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998876542 12566667777766666555443
No 254
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.42 E-value=6.1e-07 Score=64.58 Aligned_cols=81 Identities=21% Similarity=0.185 Sum_probs=72.6
Q ss_pred hcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh
Q 008615 113 FGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~ 192 (559)
.|.....+.+.+|.++++ .++|.++.||+.+.+++||.+|.+...++.++..+++.+..++++..+..+.+++
T Consensus 4 mGigRFayTplLP~M~~~-------~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~ 76 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD-------GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMAL 76 (85)
T ss_pred hhhHHHHHHhHhHHHHHh-------cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 355566677888888887 8999999999999999999999999999999999999999999999999999999
Q ss_pred chhHhHHH
Q 008615 193 APGLGVLL 200 (559)
Q Consensus 193 ~~~~~~l~ 200 (559)
.++++.+.
T Consensus 77 ~~~~~~w~ 84 (85)
T PF06779_consen 77 THSFWLWS 84 (85)
T ss_pred HhchHHHh
Confidence 98877653
No 255
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.41 E-value=0.00019 Score=73.12 Aligned_cols=143 Identities=20% Similarity=0.148 Sum_probs=113.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhh-chHHHHHHHHHHHHHHHHHHHhchh---------------------
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFL-GRKRELIIAAVLYALGALTTAYAPG--------------------- 195 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~--------------------- 195 (559)
++.+...+.-..+.+.-...+..++++.++|-| ||-+++.++.++..+|.++..++..
T Consensus 68 ~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~ 147 (571)
T KOG1237|consen 68 LHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESP 147 (571)
T ss_pred hccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCc
Confidence 777778888888888888889999999999965 8999999999998888665554321
Q ss_pred ----HhHHHHHHHHHHhhhhhhhhhhhhhhhccCC---cc---cchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH
Q 008615 196 ----LGVLLVGRLLYGLGIGLAMHGAPLYIAETCP---SQ---IRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM 265 (559)
Q Consensus 196 ----~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~ 265 (559)
...++.+.-+..+|.|+.-+...++-+|-++ ++ ++...+.++....++|..++..+-.+.-+.. +|.+.
T Consensus 148 s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~-~w~lg 226 (571)
T KOG1237|consen 148 SKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV-GWKLG 226 (571)
T ss_pred chHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc-cceee
Confidence 1255666777888999999999999999998 32 2336788999999999999988888765565 99999
Q ss_pred HhhhHHHHHHHHHHhh
Q 008615 266 YGLSAPLALLMGIGMW 281 (559)
Q Consensus 266 f~~~~~~~~~~~~~~~ 281 (559)
|.+..+..++.+++++
T Consensus 227 f~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 227 FGIPTVLNALAILIFL 242 (571)
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9998877776665554
No 256
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.37 E-value=2.6e-05 Score=72.64 Aligned_cols=156 Identities=19% Similarity=0.065 Sum_probs=98.8
Q ss_pred HHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 008615 385 PILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLY 464 (559)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (559)
.++++.|+.. .+.+.++........+...+.|.++||+|||+.-+...++..++++..- ......++.-=++
T Consensus 59 ~LY~~yg~~~-~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~-------~~~~~~L~~GRvl 130 (354)
T PF05631_consen 59 ALYESYGFSE-HQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKH-------SSNYPVLLLGRVL 130 (354)
T ss_pred HHHHHcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHh-------ccccHHHHHHHHH
Confidence 4456788887 7788888888888888899999999999999998888888887776543 2223333333233
Q ss_pred HHHhhccccccc-ceeecc----cCCccchhhHHHHHHH-HHHHHHHHHHHhhHHHHHhcCc--hhhHHHHHHHHHHHHH
Q 008615 465 VGCYQISFGPIS-WLMVSE----IFPLRTRGRGISLAVL-TNFGSNAIVTFAFSPLKELLGA--ENIFLLFAAIAFLAVL 536 (559)
Q Consensus 465 ~~~~~~~~~~~~-~~~~~~----~~p~~~~~~~~g~~~~-~~~~g~~i~~~i~g~l~~~~g~--~~~~~~~~~~~~~~~~ 536 (559)
++.......... .-++.| -+|++..+...+...+ .+.+.++++..+...+.+..|. ..+|.....+.+++.+
T Consensus 131 gGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~ 210 (354)
T PF05631_consen 131 GGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAV 210 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHH
Confidence 332222222111 112333 2465656666665553 3444555666666666776654 6788888888888887
Q ss_pred HHHhhccCCCCC
Q 008615 537 FIVRTVPETKGL 548 (559)
Q Consensus 537 ~~~~~~~~~~~~ 548 (559)
++...-+|..+.
T Consensus 211 ~I~~~W~ENyg~ 222 (354)
T PF05631_consen 211 LILKTWPENYGD 222 (354)
T ss_pred HHHhcccccCCC
Confidence 766666665543
No 257
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.31 E-value=1.1e-05 Score=66.67 Aligned_cols=107 Identities=17% Similarity=0.208 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCc
Q 008615 148 VVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPS 227 (559)
Q Consensus 148 ~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 227 (559)
-.++......+++++.+.+.+++|.|+.+++|.+.+.+-.... +-++.+.++.+-++.|++.+..++....++.+..++
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3445556677888888999999999999999999988554443 556788899999999999999999999999999999
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 228 QIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 228 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
++|++..+++......+.++|.++...+
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988876654
No 258
>PRK11462 putative transporter; Provisional
Probab=98.30 E-value=1.9e-05 Score=79.72 Aligned_cols=166 Identities=16% Similarity=0.094 Sum_probs=101.8
Q ss_pred HHHhHHHHHH-HcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh----cCCcchhh-hhHHHHHHHHHHHHHHHHhhcC
Q 008615 379 VLYYAGPILQ-SAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD----LGRRPLLI-GGVCGIALSLLLLSAYYKILGG 452 (559)
Q Consensus 379 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 452 (559)
+..|+..++. ..|.++ ..++.+..+.-+...+.-++.|+++|| +|||+..+ ++.+..++++.++.........
T Consensus 28 ~~~~l~~fyt~~~Gl~~-~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~ 106 (460)
T PRK11462 28 VMLYMMFFYTDIFGIPA-GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMN 106 (460)
T ss_pred HHHHHHHHHHHhhCCCH-HHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcc
Confidence 4445555544 467776 788999999999999999999999997 57766554 4555666555443321100011
Q ss_pred c-hhHHHHHHHHHHHHhhcccccccceeecccCC-ccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC-------chhh
Q 008615 453 F-PLVAVSALLLYVGCYQISFGPISWLMVSEIFP-LRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG-------AENI 523 (559)
Q Consensus 453 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g-------~~~~ 523 (559)
. ..+..+..+++..++.....|.. ++..|+.+ +++|.+..++-.....+|..+++.+..++....| |...
T Consensus 107 ~~~~y~~~~~~~~~~~~t~~~ipy~-al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~ 185 (460)
T PRK11462 107 GKMIYAAITYTLLTLLYTVVNIPYC-ALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGG 185 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccHH-HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHH
Confidence 1 12222333333344444333433 66667665 7889999999999999988888888777666544 3334
Q ss_pred HHHHHHHHHHHHHHHHhhccCCC
Q 008615 524 FLLFAAIAFLAVLFIVRTVPETK 546 (559)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~ 546 (559)
..+++++.+++.++++...+|+.
T Consensus 186 ~~i~~ii~~i~~~i~~~~~kE~~ 208 (460)
T PRK11462 186 IAVLSVVAFMMLAFCFFTTKERV 208 (460)
T ss_pred HHHHHHHHHHHHHHHHhcceecc
Confidence 44555555555555555555543
No 259
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.24 E-value=0.003 Score=63.10 Aligned_cols=117 Identities=14% Similarity=0.046 Sum_probs=82.8
Q ss_pred chhHHHHHHHHHHH-HHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc---------h----------------
Q 008615 141 SAVQLGLVVSGSLY-GALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA---------P---------------- 194 (559)
Q Consensus 141 s~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---------~---------------- 194 (559)
.++.+..+-....+ +..+...+..+++++++|.+++-+....+.....++++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45566666665555 456668889999999999999887777776666666552 0
Q ss_pred ------hHhHHHHHHHHHHhhhhhhhh-hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 008615 195 ------GLGVLLVGRLLYGLGIGLAMH-GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIN 257 (559)
Q Consensus 195 ------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 257 (559)
+.|.+.+.-++.-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.++++.+..++.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112223333333333333333 457788999999999999999999999999999988887766
No 260
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.18 E-value=6.3e-05 Score=73.77 Aligned_cols=108 Identities=20% Similarity=0.327 Sum_probs=89.2
Q ss_pred HHHHHHHHHHHHHHHHHHhch---h------HhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcc---cchhhhhHHHHHH
Q 008615 174 RELIIAAVLYALGALTTAYAP---G------LGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQ---IRGTLISLKELFI 241 (559)
Q Consensus 174 ~~~~~~~~~~~i~~~~~~~~~---~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 241 (559)
|.++++.+++.+|.++..++. + .+.++++.++.++|.|..-|...++++|.++++ +|...+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 577888889999998855432 2 367899999999999999999999999999875 4667888999999
Q ss_pred HHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhc
Q 008615 242 VLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWS 282 (559)
Q Consensus 242 ~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~ 282 (559)
++|..++..+.+++-++. +|.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~-~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNY-GWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS--HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhcccc-chhhhhhHHHHHHHHHHHHHHh
Confidence 999999999999988777 9999999999888877666554
No 261
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.17 E-value=2.5e-06 Score=81.01 Aligned_cols=130 Identities=17% Similarity=0.165 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchh-H-------hHHHHHHHHHHhhhhhhhhhhhhhhhccCC
Q 008615 155 GALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPG-L-------GVLLVGRLLYGLGIGLAMHGAPLYIAETCP 226 (559)
Q Consensus 155 ~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~-~-------~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 226 (559)
++..+-.+...+.|+.|||++.+.|.+++++..+..+...| . ..+.+..++.-+| -......+-+|.+|
T Consensus 360 ~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFG---Pn~ttfivpaE~FP 436 (538)
T KOG0252|consen 360 STVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFG---PNATTFIVPAEIFP 436 (538)
T ss_pred ccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcC---CCceeEEeehhhch
Confidence 34446667778999999999999999999999999988766 1 1222223333333 22344556689999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHhhhcccC-----CCCcchHHHhhhHHHHHHHHHHhhccCCchH
Q 008615 227 SQIRGTLISLKELFIVLGILLGYFVGSFQIN-----AVGGWRYMYGLSAPLALLMGIGMWSLPPSPR 288 (559)
Q Consensus 227 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-----~~~~wr~~f~~~~~~~~~~~~~~~~~~e~p~ 288 (559)
.+-|+..-|+..+..-+|.++|...-.++.+ .. +-|+.|++.+.+.++..+..+++||+.+
T Consensus 437 arvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~-g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 437 ARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNI-GVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred HHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccc-cchHHHHHHHHHHHHhHheeEEeecccc
Confidence 9999999999999999999999999888877 44 8899999999999999998899998754
No 262
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.17 E-value=3.2e-05 Score=75.72 Aligned_cols=160 Identities=12% Similarity=-0.012 Sum_probs=108.3
Q ss_pred HHHHH--cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCC-cchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHH
Q 008615 385 PILQS--AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGR-RPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSAL 461 (559)
Q Consensus 385 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (559)
.|+++ .+-+. ...|++.....++.+++.++.|+...|.+. |+.++.+.+++.++.++........+. ...++...
T Consensus 59 pYl~~lD~~A~~-~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~-~~y~mL~~ 136 (488)
T KOG2325|consen 59 PYLQKLDPTATA-TFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNG-VKYLMLVA 136 (488)
T ss_pred hhhhhcCCCCCc-chhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHH
Confidence 45555 44444 678999999999999999999999999886 888888999999998888554433222 22222222
Q ss_pred HHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH---h---------c-CchhhHHHHH
Q 008615 462 LLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE---L---------L-GAENIFLLFA 528 (559)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~---~---------~-g~~~~~~~~~ 528 (559)
-++ .+.+.+.....-.|+++..-.+.|.++++..+....+|..+||.+...+.. . + -|..+-++.+
T Consensus 137 R~l-~Gvg~~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~ 215 (488)
T KOG2325|consen 137 RIL-TGVGVGNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMA 215 (488)
T ss_pred HHH-cCcCcccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHH
Confidence 222 223333344566888887777888888888887777777777765433321 0 1 1455677788
Q ss_pred HHHHHHHHHHHhhccCCCC
Q 008615 529 AIAFLAVLFIVRTVPETKG 547 (559)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~ 547 (559)
++.++..+++.++.+|..+
T Consensus 216 i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 216 ILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred HHHHHHHHHHHhheeeccc
Confidence 8888888888877776543
No 263
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.17 E-value=3.2e-08 Score=100.18 Aligned_cols=145 Identities=18% Similarity=0.065 Sum_probs=101.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccccccc
Q 008615 397 DATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPIS 476 (559)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (559)
..++......++.++|.++.|+++||+|||+.+..+.++..++.++..+... ..++..+...-++.|...++..+..
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPS---YNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccc
Confidence 4577888888999999999999999999999999999998888877775310 1133344444444455545555666
Q ss_pred ceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh---cCchhhHHHHHHHHHHHHHHHHhhccCC
Q 008615 477 WLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL---LGAENIFLLFAAIAFLAVLFIVRTVPET 545 (559)
Q Consensus 477 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (559)
..++.|..|++.|+...++.+....+|..++..+.-.+.+. .+|+..+.+.++..++..+ ...+.||.
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pES 194 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPES 194 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccc
Confidence 78999999999999999999888877777666654333222 2366666665555544333 33455654
No 264
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.13 E-value=6.9e-05 Score=72.45 Aligned_cols=141 Identities=17% Similarity=0.073 Sum_probs=80.3
Q ss_pred HHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHhhh-----hhchHHHHHH-HHH
Q 008615 108 LGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSILVYSIAD-----FLGRKRELII-AAV 181 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~d-----r~Grr~~~~~-~~~ 181 (559)
+-.++.|.-.+.....+|.+.++.. -++|.+|.|...-+ ...+. .-++|.++.| |+||||..++ .-.
T Consensus 7 ~LY~lQGiP~GL~~gsiPflL~~~~-----~~~sy~q~~~fSla-~~PfS-lKlLWaPiVDs~y~~~~GRRKSWiiP~Q~ 79 (544)
T PF13000_consen 7 LLYFLQGIPLGLAFGSIPFLLQSMA-----KKVSYSQQAIFSLA-SYPFS-LKLLWAPIVDSVYSKRIGRRKSWIIPIQY 79 (544)
T ss_pred HHHHHcCcccccccccchhhhcccc-----CCCChhHheeeeee-echhH-HHHhhhhhhhhhcccccCCcchhhhHHHH
Confidence 3457777777776556666655411 25677777654321 12222 3456777776 8999986543 223
Q ss_pred HHHHHHHHHHhch----------------------h--HhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHH
Q 008615 182 LYALGALTTAYAP----------------------G--LGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLK 237 (559)
Q Consensus 182 ~~~i~~~~~~~~~----------------------~--~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~ 237 (559)
+.++..+..+..- + ...+...-++.=+-++.--.++-.+.-....+++++.+..-.
T Consensus 80 l~g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcq 159 (544)
T PF13000_consen 80 LSGILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQ 159 (544)
T ss_pred HHHHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHH
Confidence 3333333322211 1 112223333344444545556666777777888888888888
Q ss_pred HHHHHHHHHHHHHhhhcc
Q 008615 238 ELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 238 ~~~~~~G~~~g~~l~~~l 255 (559)
..+.++|..++..+.-.+
T Consensus 160 tvG~~~Gyfls~tvFlal 177 (544)
T PF13000_consen 160 TVGQTAGYFLSFTVFLAL 177 (544)
T ss_pred HhHhhhhHHHHHHHHHhh
Confidence 888888888877665444
No 265
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.07 E-value=0.0025 Score=61.93 Aligned_cols=119 Identities=13% Similarity=0.026 Sum_probs=89.0
Q ss_pred cchhHHHHHHHHHHH-HHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhch---------h--------------
Q 008615 140 LSAVQLGLVVSGSLY-GALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAP---------G-------------- 195 (559)
Q Consensus 140 ~s~~~~g~~~s~~~l-~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~---------~-------------- 195 (559)
..+..+.++-+...+ +..+..++.+++.+++-+.+++-+-+..+....+++++.- +
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 356677888888888 7889999999999999999999888887777777777530 1
Q ss_pred ---------HhHHHHHHHHHHhhhhhhhh-hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCC
Q 008615 196 ---------LGVLLVGRLLYGLGIGLAMH-GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINA 258 (559)
Q Consensus 196 ---------~~~l~~~r~l~G~~~g~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 258 (559)
.|..-+.-++.-+-...... .-.....|.+..+|-.|..+++..+.+++..++..+..++.+.
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 13333333333333333333 4456778999999999999999999999999999998887664
No 266
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.02 E-value=0.00023 Score=73.97 Aligned_cols=153 Identities=18% Similarity=0.071 Sum_probs=99.1
Q ss_pred HHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhhhhHHHHHHHHHHHHHHHHhhcC--chhHHHHHHHH
Q 008615 387 LQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD-LGRRPLLIGGVCGIALSLLLLSAYYKILGG--FPLVAVSALLL 463 (559)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 463 (559)
....+++. ..+..+...+....-+..+++|+++|+ +|+++.+.++.++..++..++.+....... .........+.
T Consensus 15 ~~~lg~~~-~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLa 93 (654)
T TIGR00926 15 LNFLGFSE-STSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLA 93 (654)
T ss_pred HHHcCCcH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHH
Confidence 34467776 455555555556666777888999996 689999998888888887777642110000 01111222223
Q ss_pred HHHHhhcccccccceeecccCCcc---chhhHHHHHHHHHHHHHHHHHHhhHHHHHhc-------CchhhHHHHHHHHHH
Q 008615 464 YVGCYQISFGPISWLMVSEIFPLR---TRGRGISLAVLTNFGSNAIVTFAFSPLKELL-------GAENIFLLFAAIAFL 533 (559)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~-------g~~~~~~~~~~~~~~ 533 (559)
+..++..+.-|...+...|.++++ .+-....+.....++|+.+++.+.+.+.+.. +|...|.+.+++.++
T Consensus 94 Lia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~i 173 (654)
T TIGR00926 94 LIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMIL 173 (654)
T ss_pred HHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHH
Confidence 333333444455557777777643 3667788888889999999999999887553 477778777777777
Q ss_pred HHHHHHh
Q 008615 534 AVLFIVR 540 (559)
Q Consensus 534 ~~~~~~~ 540 (559)
+.++...
T Consensus 174 a~lvf~~ 180 (654)
T TIGR00926 174 ALIVFMA 180 (654)
T ss_pred HHHHHHH
Confidence 7665443
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.00 E-value=0.0034 Score=59.99 Aligned_cols=89 Identities=17% Similarity=0.031 Sum_probs=48.7
Q ss_pred hHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHh---hhcccCCC-CcchHHHhhhH
Q 008615 195 GLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFV---GSFQINAV-GGWRYMYGLSA 270 (559)
Q Consensus 195 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l---~~~l~~~~-~~wr~~f~~~~ 270 (559)
.|...++.-++.+++.|..........++ +|++.-...++ +.++++++..++ .....+.. .+=-.-|.+..
T Consensus 116 ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqavm~----G~a~aG~l~Sl~~i~tka~~~~~~~sA~~yF~~s~ 190 (406)
T KOG1479|consen 116 FFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQAVMS----GQALAGTLTSLLRILTKAAFSDSRTSALIYFITST 190 (406)
T ss_pred hHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHHHHh----cchhHhHHHHHHHHHHHHhcCCCCceeehhHHHHH
Confidence 46667777888899888887777776665 56654333333 333333333322 22222221 12223355555
Q ss_pred HHHHHHHHHhhccCCchH
Q 008615 271 PLALLMGIGMWSLPPSPR 288 (559)
Q Consensus 271 ~~~~~~~~~~~~~~e~p~ 288 (559)
++.++++++...+|..|-
T Consensus 191 ~~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 191 VILLLCFVLYLVLPKLPF 208 (406)
T ss_pred HHHHHHHHHHHHhhcchH
Confidence 566666666666777663
No 268
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.89 E-value=4.2e-05 Score=54.82 Aligned_cols=46 Identities=20% Similarity=0.338 Sum_probs=42.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY 183 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~ 183 (559)
.|+++.|+|.+.++..+...++.+++|.++||+|+++.++....++
T Consensus 30 ~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 30 LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 7999999999999999999999999999999999998887766544
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.73 E-value=0.00022 Score=51.15 Aligned_cols=65 Identities=14% Similarity=0.203 Sum_probs=54.4
Q ss_pred HHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHH
Q 008615 369 LFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVC 434 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 434 (559)
++..+++...+.-|.+.++++.|++. .+.|.+..+..+..+++.++.|.++||.++++.......
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~Gl~~-~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~ 73 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQLGLSP-SQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSL 73 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 33444445567788999999999998 899999999999999999999999999999988765543
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.54 E-value=0.0011 Score=58.87 Aligned_cols=56 Identities=9% Similarity=0.119 Sum_probs=37.6
Q ss_pred ccchhhhhHHHHHHHHHHHHHHHhhhcccC----CCCcchHHHhhhHHHHHHHHHHhhcc
Q 008615 228 QIRGTLISLKELFIVLGILLGYFVGSFQIN----AVGGWRYMYGLSAPLALLMGIGMWSL 283 (559)
Q Consensus 228 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----~~~~wr~~f~~~~~~~~~~~~~~~~~ 283 (559)
|+|+....+...+.++|.++.-+.--.-.+ ...+|++.+.+.+++.++.+++...+
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567777777788888888876544222100 11279999999988887776666544
No 271
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.54 E-value=0.0014 Score=62.77 Aligned_cols=122 Identities=15% Similarity=0.011 Sum_probs=80.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhH--HHHHHHHHHHHhhcccc
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLV--AVSALLLYVGCYQISFG 473 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 473 (559)
..+-+...++.+..++..+.+-|+.||+|-|....++..+.+++..+=.......-.+... +....-...+.......
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim 158 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFIL 158 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhh
Confidence 6777888889999999999999999999999999999998888877655433211111111 11111111111111111
Q ss_pred cccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008615 474 PISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL 517 (559)
Q Consensus 474 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 517 (559)
.+..-+..--+|+++|+.+..+..+.+.+|.+++..+-..+..+
T Consensus 159 ~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~ 202 (480)
T KOG2563|consen 159 GLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPS 202 (480)
T ss_pred ccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCC
Confidence 12212334458999999999999999999988888777666544
No 272
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.46 E-value=0.0026 Score=61.29 Aligned_cols=111 Identities=17% Similarity=0.114 Sum_probs=82.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHH--HHHH---HHHHHHhchhHhHHHHHHHHHHhhhhhhhh
Q 008615 141 SAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAV--LYAL---GALTTAYAPGLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 141 s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~--~~~i---~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 215 (559)
-..+..+...+|.+|-.++.--...+ |+ |++.+...+ +..+ ...+.-+.++.|.+++.-+..|+..|..+.
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 46788888888888776664432221 33 333333222 2222 222333467899999999999999999999
Q ss_pred hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 216 GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
.....+.|-.++++|..+++....+-++|..++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988764
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.43 E-value=0.0017 Score=64.72 Aligned_cols=156 Identities=22% Similarity=0.201 Sum_probs=93.8
Q ss_pred HHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC-----CcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 384 GPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLG-----RRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
+.+.++++.++ .+...+.....+.. ...++.|.++|-+. ||+.++++.++..++.+.++..... ........
T Consensus 14 ~~l~~~l~ls~-~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~-~~s~~~~~ 90 (433)
T PF03092_consen 14 PFLKDDLGLSP-AQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPAS-ESSAAIAV 90 (433)
T ss_pred HHHHHHcCCCH-HHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccc-cchhhhHH
Confidence 34456678876 45555555444433 44678899999862 3444555555554444444432211 11122222
Q ss_pred HHHHHHHHHhhcccccccceeecccC---CccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHH
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIF---PLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAV 535 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~ 535 (559)
+.+++...+... .-.+.-++..|.. |.+ +|...+....+..+|+.++..+.|.+.+..+++..|.+.+.+..+..
T Consensus 91 ~~l~la~~g~a~-~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~ 168 (433)
T PF03092_consen 91 VLLFLASFGYAF-ADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLML 168 (433)
T ss_pred HHHHHHHHHHHH-HHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHH
Confidence 222222222222 1223345555654 333 78888888889999999999999999999999999988888877776
Q ss_pred HHHHhhccC
Q 008615 536 LFIVRTVPE 544 (559)
Q Consensus 536 ~~~~~~~~~ 544 (559)
+..+++.+|
T Consensus 169 ~~~~~~~~e 177 (433)
T PF03092_consen 169 IVALFLLEE 177 (433)
T ss_pred HHHHHhhhh
Confidence 666666665
No 274
>PRK03612 spermidine synthase; Provisional
Probab=97.36 E-value=0.0073 Score=61.46 Aligned_cols=136 Identities=23% Similarity=0.168 Sum_probs=83.7
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHH-HHHHHH-HHHHHH----HhchhH-hHHHHHHHHHHhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELII-AAVLYA-LGALTT----AYAPGL-GVLLVGRLLYGLGI 210 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~-~~~~~~-i~~~~~----~~~~~~-~~l~~~r~l~G~~~ 210 (559)
+|.+..+.+.+.+++++|.++|+.+++++.++.-++...+- ++.+.+ ++..+. ++...+ ..++...++.|+..
T Consensus 45 ~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 45 LGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999988754333332211 111111 111111 111111 12233456678888
Q ss_pred hhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccC-CCCcchHHHhhhHHHHHH
Q 008615 211 GLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIN-AVGGWRYMYGLSAPLALL 275 (559)
Q Consensus 211 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~~~wr~~f~~~~~~~~~ 275 (559)
|...|....+..+.. .++-+...|-......+|.++|.++.++++- .. |-....++.+.+.++
T Consensus 125 G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~l-G~~~t~~~~a~l~~~ 188 (521)
T PRK03612 125 GMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRL-GLIRTAALTGSLNLL 188 (521)
T ss_pred HHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHH
Confidence 888888777665533 2235677888899999999999999887654 44 544333344444433
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.28 E-value=0.0052 Score=50.96 Aligned_cols=108 Identities=13% Similarity=-0.057 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhccccccccee
Q 008615 400 RVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLM 479 (559)
Q Consensus 400 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (559)
.-..+......+..++.+.+.+++|.|+.++++.++..+-...... .+.+..+....+.+.+.+.. ....-.+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~------~~~~~l~~~s~l~G~~~a~l-W~aqg~y 113 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFY------PNSYTLYPASALLGFGAALL-WTAQGTY 113 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHhhhhHHh-hHhhhHH
Confidence 3444555666777888899999999999999988877765544432 22344444444444444333 3344467
Q ss_pred ecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHH
Q 008615 480 VSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPL 514 (559)
Q Consensus 480 ~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l 514 (559)
+.+...++.+++..++.-.+...+.++|..+.-.+
T Consensus 114 lt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 114 LTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888899988888887777777766654333
No 276
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.16 E-value=6.8e-05 Score=76.31 Aligned_cols=175 Identities=14% Similarity=0.017 Sum_probs=1.3
Q ss_pred HHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHH
Q 008615 367 LVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAY 446 (559)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (559)
+..+.+......+..-+..+-+++++++ .+.|++....-++.++..++..++.+|..|-+.+-.+.++++++.+++.+=
T Consensus 10 ~~~~~q~~~~g~~~~~lttiErRF~l~S-~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lP 88 (539)
T PF03137_consen 10 LLGLFQMMVSGYVNSSLTTIERRFGLSS-SQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALP 88 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhcc
Confidence 3333344433445555566667788888 899999999999999999999999999888888888888888888777531
Q ss_pred HHhhc-----------------------------------------Cc---hhHHHHHHHHHHHHhhcccccccceeecc
Q 008615 447 YKILG-----------------------------------------GF---PLVAVSALLLYVGCYQISFGPISWLMVSE 482 (559)
Q Consensus 447 ~~~~~-----------------------------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (559)
....+ .. .+..+++.-++.|.......++..+|+-|
T Consensus 89 hf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDD 168 (539)
T PF03137_consen 89 HFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDD 168 (539)
T ss_dssp ---------------------------------------------------------------SSS--------------
T ss_pred HhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecc
Confidence 10000 00 01122222233344444455677799999
Q ss_pred cCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh---------------------cC-chhhHHHHHHHHHHHHHHHHh
Q 008615 483 IFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL---------------------LG-AENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 483 ~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~ 540 (559)
.++++..+...|+..+...+|-++|-.+.+..... .| |+..|++.+.+.++..+..+.
T Consensus 169 nv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 169 NVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999998888877776666654421 23 445566666666666655444
Q ss_pred hc
Q 008615 541 TV 542 (559)
Q Consensus 541 ~~ 542 (559)
+.
T Consensus 249 FP 250 (539)
T PF03137_consen 249 FP 250 (539)
T ss_dssp --
T ss_pred CC
Confidence 43
No 277
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.07 E-value=0.0078 Score=62.17 Aligned_cols=185 Identities=14% Similarity=-0.002 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 359 KAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
+.++++..+..+.+......+..-+..+-+++++++ .+.|++...+-++.++...+..+..-|.-|-+++-++.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~S-s~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISS-SQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCC-CcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHH
Confidence 344555555555554444445555556666788887 6799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh----------------c---------------------------Cc---hhHHHHHHHHHHHHhhccc
Q 008615 439 SLLLLSAYYKIL----------------G---------------------------GF---PLVAVSALLLYVGCYQISF 472 (559)
Q Consensus 439 ~~~~~~~~~~~~----------------~---------------------------~~---~~~~~~~~~~~~~~~~~~~ 472 (559)
+.++..+--... . .. .+.++++.-++.|.+....
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 888876421000 0 00 2223333344445555555
Q ss_pred ccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh------------------cC-chhhHHHHHHHHHH
Q 008615 473 GPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL------------------LG-AENIFLLFAAIAFL 533 (559)
Q Consensus 473 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~------------------~g-~~~~~~~~~~~~~~ 533 (559)
.++..+|+.|-+.++......|+..++..+|-++|-.+.+.+... .| |+..|++.+.+.++
T Consensus 255 ~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~ 334 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLF 334 (735)
T ss_pred ccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHH
Confidence 677778999999999999999999998888877777777665431 23 44567777777777
Q ss_pred HHHHHHhhccC
Q 008615 534 AVLFIVRTVPE 544 (559)
Q Consensus 534 ~~~~~~~~~~~ 544 (559)
..+.++++-++
T Consensus 335 ~a~p~f~fPk~ 345 (735)
T KOG3626|consen 335 SAVPLFFFPKE 345 (735)
T ss_pred HHHHHHhCccc
Confidence 77765554433
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.07 E-value=0.038 Score=55.13 Aligned_cols=121 Identities=10% Similarity=0.009 Sum_probs=79.4
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCc---------------------
Q 008615 396 ADATRVSVVIGVFKLVM-TWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGF--------------------- 453 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~-~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------- 453 (559)
+...++.+...+...+. .++.+++++|++|+++...........++++++......+.
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~ 122 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGF 122 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHH
Confidence 34444544444444444 78889999999999988776666666655555442211111
Q ss_pred ----hhHHHHHHHHHHHHhhccccc-ccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008615 454 ----PLVAVSALLLYVGCYQISFGP-ISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE 516 (559)
Q Consensus 454 ----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 516 (559)
..+....+.+..-.++....+ +.|.+++|.+..++..+-.++....+++|..+++.+...+.+
T Consensus 123 i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 123 IAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122222333333333333 778999999999999999999999999999999998887763
No 279
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.97 E-value=0.00071 Score=61.00 Aligned_cols=136 Identities=14% Similarity=0.050 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q 008615 145 LGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAET 224 (559)
Q Consensus 145 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~ 224 (559)
.|.+.-+-.+...+..+.+....||+.--.=..+..++.+.+.++.+++++.++=+++-.+..++.|.....-.++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 4455555566667777777788888654333344556677888899999999999999999999888777665554333
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC-CcchHHHhhhHHHHHHHHHHhhccCC
Q 008615 225 CPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV-GGWRYMYGLSAPLALLMGIGMWSLPP 285 (559)
Q Consensus 225 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-~~wr~~f~~~~~~~~~~~~~~~~~~e 285 (559)
++ ....+.+..+.+..+++|..--..+.+.. ..-|...++...+.++.....+++-+
T Consensus 143 Y~----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~ 200 (409)
T KOG3880|consen 143 YP----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLK 200 (409)
T ss_pred CC----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeC
Confidence 33 23455666666666666666555554421 15677777766666665555554433
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.81 E-value=0.00025 Score=67.23 Aligned_cols=112 Identities=9% Similarity=-0.162 Sum_probs=2.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc-------CchhHHHHHHHHHHHHhhccc
Q 008615 400 RVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILG-------GFPLVAVSALLLYVGCYQISF 472 (559)
Q Consensus 400 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 472 (559)
.....++++..+|+.+.++..-+..+++.+.+..++=.+..-++..+...+. -.+-+..+.+.+..++.++..
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 4566788999999998887432211333333322222222222222211100 011122333444455555555
Q ss_pred ccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 473 GPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 473 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
......+..+..++++|..+..+...+-..|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666677888888888888887777777777766666543
No 281
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.71 E-value=0.049 Score=51.45 Aligned_cols=148 Identities=23% Similarity=0.163 Sum_probs=89.7
Q ss_pred HHHhHHHHHHHcCCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHH
Q 008615 379 VLYYAGPILQSAGFSAA-ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVA 457 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
.....+.+..+.+.... ...+.......+...++.++.|++.||.|||+.+..+.....++.+...+. .......
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 96 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALA----PNVGLAL 96 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhC----ccchHHH
Confidence 33455555555555432 257788888888888888999999999999977776665433332222221 1112222
Q ss_pred HHHHHHHHHHhhcccccccceeecccCCc-cchhhHHHHHHH-HHHHHHHHHHHhhHHHHHh--cCchhhHHHHHHH
Q 008615 458 VSALLLYVGCYQISFGPISWLMVSEIFPL-RTRGRGISLAVL-TNFGSNAIVTFAFSPLKEL--LGAENIFLLFAAI 530 (559)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~-~~~~g~~i~~~i~g~l~~~--~g~~~~~~~~~~~ 530 (559)
+.......+.......+....+..|.+|. +.++...+.... ...++..+++.+.+.+... .+|...+......
T Consensus 97 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 97 LLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHH
Confidence 22222223333334455666888888887 578888888887 5777778888666666554 3455544443333
No 282
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.51 E-value=0.11 Score=51.30 Aligned_cols=101 Identities=19% Similarity=0.299 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHhhh---hhchHHHHHHHHHHHHHHHHHHHhc------------------hhHhHHHHHHHHHHhhhh
Q 008615 153 LYGALLGSILVYSIAD---FLGRKRELIIAAVLYALGALTTAYA------------------PGLGVLLVGRLLYGLGIG 211 (559)
Q Consensus 153 ~l~~~i~~~~~g~l~d---r~Grr~~~~~~~~~~~i~~~~~~~~------------------~~~~~l~~~r~l~G~~~g 211 (559)
.+|..++..+.+.+.+ ++||++.+.++..+..++.++.-+. +++...++.-++.|++.+
T Consensus 289 g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~ 368 (461)
T KOG3098|consen 289 GLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDA 368 (461)
T ss_pred hHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHH
Confidence 3444555555666664 6899999999999988888877653 135577778899999999
Q ss_pred hhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhc
Q 008615 212 LAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSF 254 (559)
Q Consensus 212 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 254 (559)
......+.++.+.+ +++|..+.++...-..++..++......
T Consensus 369 ~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 369 CFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 99999999999999 5678888888887777777665554443
No 283
>PRK03612 spermidine synthase; Provisional
Probab=96.42 E-value=0.095 Score=53.49 Aligned_cols=50 Identities=20% Similarity=0.251 Sum_probs=36.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhHHHHH-hcCchhhHHHHHHHHHHHHHHH
Q 008615 489 RGRGISLAVLTNFGSNAIVTFAFSPLKE-LLGAENIFLLFAAIAFLAVLFI 538 (559)
Q Consensus 489 ~~~~~g~~~~~~~~g~~i~~~i~g~l~~-~~g~~~~~~~~~~~~~~~~~~~ 538 (559)
.+...|-....+.+|+++|+.+.+.+.- ..|.....++.+.+.++.+++.
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 4667788888999999999999887765 6787666666666655554433
No 284
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.38 E-value=0.19 Score=48.81 Aligned_cols=133 Identities=12% Similarity=0.080 Sum_probs=82.7
Q ss_pred HHhHHHHHHH-cCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHH
Q 008615 380 LYYAGPILQS-AGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAV 458 (559)
Q Consensus 380 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
.+..|++.+. .+++..+...-+.-...-..++..+....+.|.++.|++++.+.+...+...++.+. .....+
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~------~sv~~m 97 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFG------TSVLAM 97 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH------CcHHHH
Confidence 3344444444 566663333333333344456666777788999999999998887777766666542 233333
Q ss_pred HHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcC
Q 008615 459 SALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLG 519 (559)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g 519 (559)
-..-++.|..... -...++++=..+|+++.-++.+...+...+|..++..++-.+....+
T Consensus 98 q~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~ 157 (412)
T PF01770_consen 98 QLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG 157 (412)
T ss_pred HHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3333333333322 22334566666788888899999999888888888887776666433
No 285
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.07 E-value=0.18 Score=49.75 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=89.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh------ch----hHhHHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAY------AP----GLGVLLVGRLLYG 207 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~------~~----~~~~l~~~r~l~G 207 (559)
-|+++..+|.+-+...+....+.+...++.+|+|..|.=++++..-.++..++.. .+ +...++.+-++.=
T Consensus 288 ~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR 367 (432)
T PF06963_consen 288 QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSR 367 (432)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHH
Confidence 4899999999999999999999999999999999988877776654433333322 12 3334444444444
Q ss_pred hhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 208 LGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 208 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
+|.=..-....-++.|..|+++||...|...+..++-.++-..++-.+
T Consensus 368 ~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 368 IGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 454445666777899999999999999999999999888887776654
No 286
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.97 E-value=0.053 Score=39.34 Aligned_cols=67 Identities=18% Similarity=0.037 Sum_probs=58.2
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAY 446 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (559)
+.-.+|...++.+++. .+++++.+...++.++|.+...++.++..+++.+..+.+...+..+.+.+.
T Consensus 11 yTplLP~M~~~~~ls~-~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 11 YTPLLPLMQADGGLSL-SQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHhHhHHHHHhcCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557788888888888 899999999999999999999999999888888888888888888877753
No 287
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.82 E-value=0.043 Score=53.82 Aligned_cols=113 Identities=11% Similarity=-0.091 Sum_probs=74.3
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhhcC----chhHHHHHHHHHHHHhhcccccccceeecccCCcc---chhhHHHHHHHH
Q 008615 427 PLLIGGVCGIALSLLLLSAYYKILGG----FPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLR---TRGRGISLAVLT 499 (559)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~ 499 (559)
+.+.++.++..++.+++.+....... ......+.+. +.+.+.++.=|....+..|.++++ .+..........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~-lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~ 80 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLA-LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWG 80 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHH-HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHH-HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHH
Confidence 45666777777777775544321111 1122222232 334444455566667788888755 466677788888
Q ss_pred HHHHHHHHHHhhHHHHHhcCchhhHHHHHHHHHHHHHHHHh
Q 008615 500 NFGSNAIVTFAFSPLKELLGAENIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 500 ~~~g~~i~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 540 (559)
.++|+.++..+.+++.++.||...|.+.++..+++.+..+.
T Consensus 81 in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 81 INIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred HhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999988888877775444
No 288
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.67 E-value=0.014 Score=56.34 Aligned_cols=150 Identities=18% Similarity=0.074 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh----cCCcchhhhh-HH
Q 008615 360 AFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD----LGRRPLLIGG-VC 434 (559)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~-~~ 434 (559)
.++....+....++. +..=..|.+.|++..|... ...+.......+.+++..++.|..+|| +||||..+.. ..
T Consensus 33 ~li~v~~ia~Gvqf~-wA~elsy~tPyl~~lGvph-k~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 33 KLISVASIAAGVQFG-WALELSYLTPYLQSLGVPH-KWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHH-HHHHhccccHHHHHcCCCc-ccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 333333343444433 2245567888889999887 667777777778888889999999997 7888776654 44
Q ss_pred HHHHHHHHHHHHHHhh----cC-ch----h---HHHHHHHHHHHHhhcccccccceeecccCCccchhh-HHHHHHHHHH
Q 008615 435 GIALSLLLLSAYYKIL----GG-FP----L---VAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGR-GISLAVLTNF 501 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~----~~-~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~g~~~~~~~ 501 (559)
...++++++++..... .+ .. . ..++.+.++-........|.- ++..|+..++.+.+ +++....+..
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~r-a~L~Dl~~~d~~~~~Ans~f~~f~a 189 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCR-ALLADLARGDAKKTRANSVFSFFMA 189 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHH-HHHHHhccChhhhhccchhHHHHHH
Confidence 4555555554332110 01 11 1 111222222233334444544 77888887777777 8888888888
Q ss_pred HHHHHHHHhhH
Q 008615 502 GSNAIVTFAFS 512 (559)
Q Consensus 502 ~g~~i~~~i~g 512 (559)
+|+.+|-.+.+
T Consensus 190 vGnvLGY~~g~ 200 (498)
T KOG0637|consen 190 VGNVLGYALGS 200 (498)
T ss_pred hcceeeeeccc
Confidence 88776665554
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=95.19 E-value=0.84 Score=45.55 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchH--HHHHHH--HHHHHHHHHHHHh---------chhHhHHHHHHHHHHhhh
Q 008615 144 QLGLVVSGSLYGALLGSILVYSIADFLGRK--RELIIA--AVLYALGALTTAY---------APGLGVLLVGRLLYGLGI 210 (559)
Q Consensus 144 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~~~~~--~~~~~i~~~~~~~---------~~~~~~l~~~r~l~G~~~ 210 (559)
..-.+..+|.++-.+|..+..+.. .-++| ++++.+ =+++.-..++|.. -++-+..++..++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 445566677777777776554321 11222 333222 2233333344432 246677788899999999
Q ss_pred hhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhc
Q 008615 211 GLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSF 254 (559)
Q Consensus 211 g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 254 (559)
|-....+..+..+..++++|..+..+...+..+|..+|..++-.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999887654
No 290
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=94.98 E-value=3.1 Score=38.82 Aligned_cols=73 Identities=21% Similarity=0.348 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCC
Q 008615 153 LYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCP 226 (559)
Q Consensus 153 ~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 226 (559)
.+..+..+++.+.+.+++|-|+.+.++...+... +..=+-+.|..++..-.+.|++.+..+..--+++++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 3444556666669999999999999988877542 223345678899999999999999998887777766543
No 291
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=94.45 E-value=1.6 Score=45.01 Aligned_cols=159 Identities=14% Similarity=0.095 Sum_probs=98.3
Q ss_pred HHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhhhhHHHHHHHHHHHHHHHHhhcC------
Q 008615 380 LYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDD-LGRRPLLIGGVCGIALSLLLLSAYYKILGG------ 452 (559)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 452 (559)
.....++...++... ..+.-.............+++++++|- +||.+.+.++.++..++..++.+.......
T Consensus 58 ~nlv~ylt~~~~~~~-~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~ 136 (571)
T KOG1237|consen 58 SNLVTYLTLELHASG-GGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCK 136 (571)
T ss_pred hHHHHHHHHHhccch-HHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcccc
Confidence 334444445556555 444445555555666777889999996 588888888888777776666554432210
Q ss_pred --------c--h---hHHHHHHHHHHHHhhcccccccceeecccCC----ccchh--hHHHHHHHHHHHHHHHHHHhhHH
Q 008615 453 --------F--P---LVAVSALLLYVGCYQISFGPISWLMVSEIFP----LRTRG--RGISLAVLTNFGSNAIVTFAFSP 513 (559)
Q Consensus 453 --------~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~--~~~g~~~~~~~~g~~i~~~i~g~ 513 (559)
. . ...+.........+.++.-|...++-+|-++ .+.+. .-+.......++|..++..+.-+
T Consensus 137 ~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vy 216 (571)
T KOG1237|consen 137 FKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVY 216 (571)
T ss_pred CCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 0 0 1112222222222334444555566677666 22223 55666777788888888888888
Q ss_pred HHHhcCchhhHHHHHHHHHHHHHHHH
Q 008615 514 LKELLGAENIFLLFAAIAFLAVLFIV 539 (559)
Q Consensus 514 l~~~~g~~~~~~~~~~~~~~~~~~~~ 539 (559)
+.+..||...|.+..++.+++.++.+
T Consensus 217 iq~~~~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 217 IQDNVGWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred hhhcccceeeccHHHHHHHHHHHHHH
Confidence 88889998888888877777766544
No 292
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=94.14 E-value=0.11 Score=46.57 Aligned_cols=156 Identities=15% Similarity=0.045 Sum_probs=76.4
Q ss_pred HHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHH
Q 008615 385 PILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLY 464 (559)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (559)
++++..|+.. .+.+.++.......++...+.|-++||.|||+.-+...+...++++.= ....+.++..--+.
T Consensus 62 yLYstYgFgk-G~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiTK-------hSpqYkVLmVGR~L 133 (454)
T KOG4332|consen 62 YLYSTYGFGK-GDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCITK-------HSPQYKVLMVGRVL 133 (454)
T ss_pred eeehhcCccC-CccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHhh-------cCCceEEEeehhhh
Confidence 3456667776 566666666666667777788899999999987665444444443321 11111111111111
Q ss_pred HHHhh-cccccccceeecccC-----CccchhhHHHHHH-HHHHHHHHHHHHhhHHHHHhcC--chhhHHHHHHHHHHHH
Q 008615 465 VGCYQ-ISFGPISWLMVSEIF-----PLRTRGRGISLAV-LTNFGSNAIVTFAFSPLKELLG--AENIFLLFAAIAFLAV 535 (559)
Q Consensus 465 ~~~~~-~~~~~~~~~~~~~~~-----p~~~~~~~~g~~~-~~~~~g~~i~~~i~g~l~~~~g--~~~~~~~~~~~~~~~~ 535 (559)
+|... ..+...-.-++.|.. |.+......+=.. ..+.+.++++......+.|.++ .-.+|-..+.+..++.
T Consensus 134 GGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm 213 (454)
T KOG4332|consen 134 GGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM 213 (454)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence 11111 111111112344543 3333333333333 2244455566666666677665 4455655555555555
Q ss_pred HHHHhhccCCCCC
Q 008615 536 LFIVRTVPETKGL 548 (559)
Q Consensus 536 ~~~~~~~~~~~~~ 548 (559)
.+.+.---|..++
T Consensus 214 Avil~~W~ENygd 226 (454)
T KOG4332|consen 214 AVILSSWSENYGD 226 (454)
T ss_pred HHHHhhhhhccCC
Confidence 5444433444443
No 293
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=92.99 E-value=2.3 Score=39.88 Aligned_cols=116 Identities=22% Similarity=0.136 Sum_probs=73.2
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHH-------HHHHHHh--chhHhHHHHHHHHHHh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYAL-------GALTTAY--APGLGVLLVGRLLYGL 208 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i-------~~~~~~~--~~~~~~l~~~r~l~G~ 208 (559)
+|-.-.|.+.+.+.|.+.+++|+...-++.|.--.-+.+..-+++..+ ..+.+++ .++-+.++++-++.|.
T Consensus 38 lG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~ 117 (508)
T COG4262 38 LGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGV 117 (508)
T ss_pred cCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 455677889999999999999999998888754333222222222211 1112222 3467788888999999
Q ss_pred hhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 209 GIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 209 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
-.|...|..+.++..-. .+-....+.....-.+|...+.++-.++
T Consensus 118 LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 118 LVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred HHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHH
Confidence 99999999999887622 1112222333333666666666655554
No 294
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=92.05 E-value=0.9 Score=42.98 Aligned_cols=121 Identities=18% Similarity=0.051 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHH------Hhc------hhHhHHHHHHHHHHhhhhhh--hhhh--
Q 008615 154 YGALLGSILVYSIADFLGRKRELIIAAVLYALGALTT------AYA------PGLGVLLVGRLLYGLGIGLA--MHGA-- 217 (559)
Q Consensus 154 l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~------~~~------~~~~~l~~~r~l~G~~~g~~--~~~~-- 217 (559)
....+..++.|...|+..|+|++...+.+.-++.+.+ .+. .++..+..+-++.-..++.. ...+
T Consensus 74 gs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~ 153 (503)
T KOG2601|consen 74 GSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGT 153 (503)
T ss_pred hHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 3556777888999999999999887766543332222 222 24554444444332222211 1111
Q ss_pred hhhhhccC----Ccccch---hhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHH
Q 008615 218 PLYIAETC----PSQIRG---TLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALL 275 (559)
Q Consensus 218 ~~~i~~~~----~~~~r~---~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 275 (559)
..+-.||. ..+.+. ++.+..-..-..-..+.|.+.|.++... +-|..-.+.++..++
T Consensus 154 i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfv-sl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 154 ILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFV-SLRASAGTFAAWALV 217 (503)
T ss_pred EEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceee-chhhhhhhhHHHHHH
Confidence 11223443 222233 3335555566667788999988887766 777755555555444
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.42 E-value=11 Score=36.77 Aligned_cols=54 Identities=2% Similarity=-0.240 Sum_probs=27.8
Q ss_pred HHHHhhChhhHHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 008615 369 LFQQITGQPSVLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLG 424 (559)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~ 424 (559)
........+.+..-.+++.++.-..+. .-.+...+.+.+.+..++...+.-+..
T Consensus 27 GiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~ 80 (406)
T KOG1479|consen 27 GIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLN 80 (406)
T ss_pred hcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334445566666666666555442 445555555555555555554444433
No 296
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.21 E-value=2.9 Score=42.29 Aligned_cols=108 Identities=12% Similarity=-0.007 Sum_probs=70.2
Q ss_pred HHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc----C----------------------chhHHHHHH
Q 008615 408 FKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILG----G----------------------FPLVAVSAL 461 (559)
Q Consensus 408 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------------------~~~~~~~~~ 461 (559)
+.++..++..++++++++.++..+........+.++++...... . ..|. ...+
T Consensus 71 ~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt-~slf 149 (491)
T PF03219_consen 71 VAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWT-FSLF 149 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHH-HHHH
Confidence 34555677889999999998877666555555555554321100 0 0111 1112
Q ss_pred HHHHHHhhcc-cccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008615 462 LLYVGCYQIS-FGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKE 516 (559)
Q Consensus 462 ~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~ 516 (559)
.+..-.++.. ..-+.|.+++|.++.++..+-.++.....++|..+++.+...+.+
T Consensus 150 Yv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 150 YVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222 223568899999999999999999999999999999998887777
No 297
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=90.09 E-value=0.098 Score=49.66 Aligned_cols=108 Identities=16% Similarity=0.173 Sum_probs=3.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh-hchHHHHHHH--HHHHHHHHHHHH----------hchhHhHHHHHHHHHHhhhhhh
Q 008615 147 LVVSGSLYGALLGSILVYSIADF-LGRKRELIIA--AVLYALGALTTA----------YAPGLGVLLVGRLLYGLGIGLA 213 (559)
Q Consensus 147 ~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~~~--~~~~~i~~~~~~----------~~~~~~~l~~~r~l~G~~~g~~ 213 (559)
.+..+|.++-.+|..+.++.-=+ -.+|++.+.+ =+++.-..++|. +.+|-+..++..++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877764211 1244444321 122222223331 2345577788899999999999
Q ss_pred hhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhc
Q 008615 214 MHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSF 254 (559)
Q Consensus 214 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 254 (559)
......+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888888888888877654
No 298
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=90.06 E-value=19 Score=36.01 Aligned_cols=122 Identities=12% Similarity=-0.045 Sum_probs=77.8
Q ss_pred hhHHHHHHHHHH-HHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhc---------------Cch-----
Q 008615 396 ADATRVSVVIGV-FKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILG---------------GFP----- 454 (559)
Q Consensus 396 ~~~~~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~----- 454 (559)
+....+-...-+ ++++..++..++.++..+.++...........+++++....... ..+
T Consensus 61 e~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~ 140 (509)
T COG3202 61 ESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKW 140 (509)
T ss_pred hhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcccee
Confidence 344444444444 56777788889999999988887766666666666655432100 011
Q ss_pred -------hHHHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008615 455 -------LVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEL 517 (559)
Q Consensus 455 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~ 517 (559)
|.......+.-........-+.+..+.|....++..+-+++.+...+++..+++.+..++..+
T Consensus 141 ~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 141 FILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 222222222222222222335567889999999999999999999999999999988887663
No 299
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=88.75 E-value=5.9 Score=38.00 Aligned_cols=142 Identities=15% Similarity=0.034 Sum_probs=61.9
Q ss_pred HHHHHHhhChhhHHHhHHHHHHHcCCCCch--hHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhh-hHHHHHHHHHHH
Q 008615 367 LVLFQQITGQPSVLYYAGPILQSAGFSAAA--DATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIG-GVCGIALSLLLL 443 (559)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-~~~~~~~~~~~~ 443 (559)
+.+..+...+.... -.|.+++.-+.+-.. ......-++.+=-+-..++=....+|+|||+..++ +..+.+..+..+
T Consensus 38 ~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllL 116 (510)
T KOG3574|consen 38 FLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLL 116 (510)
T ss_pred HHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHH
Confidence 34444544444444 788888865554311 22223333323222222222233349999887654 444444444444
Q ss_pred HHHHHh----hcCchhHHHH--HHHHHHHHhhcccc-cccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhh
Q 008615 444 SAYYKI----LGGFPLVAVS--ALLLYVGCYQISFG-PISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAF 511 (559)
Q Consensus 444 ~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~ 511 (559)
...... ....+..... .++++.+.. ... .....+......++.-|-+..........|.+++..++
T Consensus 117 s~~v~~~~g~ng~~p~v~~lt~~f~LLnfla--AtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~if 189 (510)
T KOG3574|consen 117 SYLVDRGLGGNGGLPNVVALTLLFLLLNFLA--ATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVF 189 (510)
T ss_pred hhCCCcccccCCCCcchHHHHHHHHHHHHHH--hhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhccee
Confidence 432110 0111111111 112222111 111 12223334445566666665555555666666665554
No 300
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=84.41 E-value=28 Score=30.69 Aligned_cols=38 Identities=26% Similarity=0.506 Sum_probs=18.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHH
Q 008615 233 LISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPL 272 (559)
Q Consensus 233 ~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~ 272 (559)
.-.......-++..+|..+++.+.+.. +. +..++.+++
T Consensus 163 ~~~~~~~~~i~~f~~Ga~~ga~l~~~~-~~-~al~~~~~~ 200 (209)
T PF06912_consen 163 RRALRYLLIILSFFIGAILGALLYRRL-GF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hh-HHHHHHHHH
Confidence 333444445555566666666655544 43 333333333
No 301
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=84.23 E-value=4 Score=37.82 Aligned_cols=118 Identities=16% Similarity=0.080 Sum_probs=81.0
Q ss_pred cccc-hhHHHHHHHHHHHHHHHHHHHHHHhhhhh-chHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhh
Q 008615 138 FNLS-AVQLGLVVSGSLYGALLGSILVYSIADFL-GRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMH 215 (559)
Q Consensus 138 ~~~s-~~~~g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 215 (559)
+.++ +.|.-|....|.+|..+..--.-..--++ ---.++-+--+++.+...+..+.++++..++.-+.-|+-.|..++
T Consensus 282 ~sls~~sqYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYV 361 (409)
T KOG3880|consen 282 FSLSKDSQYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYV 361 (409)
T ss_pred CccchhhcchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHH
Confidence 4444 34688888888887654322111110000 001112223344455556667789999999999999998888888
Q ss_pred hhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 216 GAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 216 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
...--+.+-.++++|-.+|+.....-++|..++.+++-.+
T Consensus 362 NTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 362 NTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 8887788778889999999999999999999988887654
No 302
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=82.07 E-value=28 Score=31.66 Aligned_cols=103 Identities=13% Similarity=0.056 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh-hchHHHHH----HHHHHHHHHHHHHHh-c----hhHhHHHHHHHHHHhhhhhhh
Q 008615 145 LGLVVSGSLYGALLGSILVYSIADF-LGRKRELI----IAAVLYALGALTTAY-A----PGLGVLLVGRLLYGLGIGLAM 214 (559)
Q Consensus 145 ~g~~~s~~~l~~~i~~~~~g~l~dr-~Grr~~~~----~~~~~~~i~~~~~~~-~----~~~~~l~~~r~l~G~~~g~~~ 214 (559)
.....-++..|+.+|.+..|++... +.||+.+. .+++++.+..++... . .++..+++.-|+.|++.=+..
T Consensus 143 ~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ 222 (267)
T PF07672_consen 143 IPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQ 222 (267)
T ss_pred hHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhh
Confidence 3445556677777888888888874 55665543 344455554444212 1 146678888888888764455
Q ss_pred hhhhhhhhccCCcccchhhhhHHHHHHHHHHHHH
Q 008615 215 HGAPLYIAETCPSQIRGTLISLKELFIVLGILLG 248 (559)
Q Consensus 215 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 248 (559)
++...+--|+ +..++.+.--.++..+++|.++-
T Consensus 223 ~ViL~lPhEy-K~~~pk~ig~~Fg~iWGfGY~~y 255 (267)
T PF07672_consen 223 GVILNLPHEY-KGYNPKKIGIQFGLIWGFGYIFY 255 (267)
T ss_pred HHHhcChhhh-cCCCcceehhHHHHHHHHHHHHH
Confidence 5444433332 23333334444455566666543
No 303
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=77.87 E-value=53 Score=29.59 Aligned_cols=32 Identities=6% Similarity=-0.121 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHhhhcCCcchhhhhHHHHHHH
Q 008615 408 FKLVMTWIAVAKVDDLGRRPLLIGGVCGIALS 439 (559)
Q Consensus 408 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 439 (559)
+..+..+.+-+++.|+..|.+.+++.+++.+.
T Consensus 252 CT~lAVigGk~lAskIS~rtVt~~ggi~Fi~F 283 (294)
T KOG2881|consen 252 CTGLAVIGGKYLASKISVRTVTLIGGILFIIF 283 (294)
T ss_pred HHHHHHhhhHHHhhhheeEEEEEecchhHHHH
Confidence 33333334446788888888877766655443
No 304
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=77.45 E-value=17 Score=29.86 Aligned_cols=52 Identities=23% Similarity=0.383 Sum_probs=35.6
Q ss_pred hhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHH
Q 008615 194 PGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLG 248 (559)
Q Consensus 194 ~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 248 (559)
+.+..++..-++.|+|. ..+.+.+++..+++++.|..+|+-.+-.+++.+.-
T Consensus 95 P~~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~~ 146 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMWE 146 (153)
T ss_pred CchHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHHH
Confidence 34555555555555543 33566667777788889999999988888876643
No 305
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=77.41 E-value=13 Score=37.20 Aligned_cols=62 Identities=13% Similarity=0.124 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCC
Q 008615 198 VLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAV 259 (559)
Q Consensus 198 ~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 259 (559)
.+++.-++.-+..-..+....++-+.+.+|.-=|..|.+.++..++|+---..+.-++++..
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 34445677788888888999999999999999999999999999988655444444444443
No 306
>PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [].; GO: 0046873 metal ion transmembrane transporter activity, 0030001 metal ion transport, 0055085 transmembrane transport, 0016020 membrane
Probab=76.50 E-value=71 Score=30.32 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=17.4
Q ss_pred hHhHHHHHHHHHHhhhhhhhhhhh-hhhhccCCcc
Q 008615 195 GLGVLLVGRLLYGLGIGLAMHGAP-LYIAETCPSQ 228 (559)
Q Consensus 195 ~~~~l~~~r~l~G~~~g~~~~~~~-~~i~~~~~~~ 228 (559)
+...-.+--.+++++.|...-++. -++.|....+
T Consensus 259 ~~~~~~~~~~~~a~aaG~~lyv~~~ell~~~~~~~ 293 (317)
T PF02535_consen 259 SSSSDIVSGILLAFAAGTFLYVAFVELLPEEFHNK 293 (317)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444455556677777665543332 2344444333
No 307
>COG3619 Predicted membrane protein [Function unknown]
Probab=75.81 E-value=58 Score=29.00 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHHHhhhcccccccccccccccCCCCCCcc-ccccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhch-HHH
Q 008615 98 SVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTT-WFNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGR-KRE 175 (559)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Gr-r~~ 175 (559)
...+..+++..+.+++.+.....+......+..+...-. .+.-.+...........+...++......+..|..| ..+
T Consensus 9 ~l~l~~lLa~~aGfvDa~~f~~~gg~F~s~~TGN~v~~gi~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~ 88 (226)
T COG3619 9 SLRLGLLLALVAGFVDAFGFLHLGGVFVSFMTGNLVLLGIELAEGDAALAVLLLLPILAFVLGVAAAELISRRATRSFIP 88 (226)
T ss_pred hHHHHHHHHHHhhhHHHHHHHHhcCchhhheeccHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchH
Confidence 344555666667777777764444444333332111100 011223445566666777777776555555555554 222
Q ss_pred --HHHHHHHHHHHHHHHHhc----hhHhHHHHHHHHHH
Q 008615 176 --LIIAAVLYALGALTTAYA----PGLGVLLVGRLLYG 207 (559)
Q Consensus 176 --~~~~~~~~~i~~~~~~~~----~~~~~l~~~r~l~G 207 (559)
....+++..+..+..++. ++....+..-+..|
T Consensus 89 ~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg 126 (226)
T COG3619 89 VLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMG 126 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHH
Confidence 223333333333444432 35555555555554
No 308
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=75.37 E-value=12 Score=28.27 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhh-chHHHHHHHHHHHH
Q 008615 146 GLVVSGSLYGALLGSILVYSIADFL-GRKRELIIAAVLYA 184 (559)
Q Consensus 146 g~~~s~~~l~~~i~~~~~g~l~dr~-Grr~~~~~~~~~~~ 184 (559)
+.-.+.-+++..+.....||+.||| |.+++.++..++.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllG 84 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLG 84 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 3445566777777888889999987 66666555444433
No 309
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.71 E-value=12 Score=28.28 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=29.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCc
Q 008615 486 LRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGA 520 (559)
Q Consensus 486 ~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~ 520 (559)
++.++.+.++-...-.+++.+....+|++.|++-.
T Consensus 37 ~s~k~~~~a~klssefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 37 ESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 45677888888888889999999999999998743
No 310
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=73.53 E-value=66 Score=29.32 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=10.7
Q ss_pred chHHHhhhHHHHHHHHHHhhcc
Q 008615 262 WRYMYGLSAPLALLMGIGMWSL 283 (559)
Q Consensus 262 wr~~f~~~~~~~~~~~~~~~~~ 283 (559)
..+.=++..++.++..+++.++
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fi 135 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFI 135 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeee
Confidence 3444445555555555554444
No 311
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=72.45 E-value=85 Score=29.34 Aligned_cols=48 Identities=27% Similarity=0.221 Sum_probs=25.5
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhh---hchHHHHHHHHHHHHHHHHHHH
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADF---LGRKRELIIAAVLYALGALTTA 191 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr---~Grr~~~~~~~~~~~i~~~~~~ 191 (559)
++......+++.++... .+..+-.++ ||.||.=+++.++.++..+..+
T Consensus 55 ~Hml~D~~al~lal~A~------~~a~r~~~~~~TfGy~R~eiLaa~~nav~Li~~s 105 (296)
T COG1230 55 LHMLSDALALLLALIAI------KLARRPATKRFTFGYKRLEILAAFLNALLLIVVS 105 (296)
T ss_pred HHHHHHHHHHHHHHHHH------HHhcCCCCCCCCccHhHHHHHHHHHHHHHHHHHH
Confidence 55555545444443322 223333333 8888877777666665544444
No 312
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=69.78 E-value=1e+02 Score=29.49 Aligned_cols=78 Identities=14% Similarity=-0.001 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhcccccccceeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHH-HhcCchhhHHHHHHHHHHHH
Q 008615 457 AVSALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLK-ELLGAENIFLLFAAIAFLAV 535 (559)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~-~~~g~~~~~~~~~~~~~~~~ 535 (559)
++.......|...+.-.|+.+.+.+... .......+.....-++|+..+......+. -..|..-.-...+.+.++++
T Consensus 107 Vly~lt~vIG~LVG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aA 184 (508)
T COG4262 107 VLYALTAVIGVLVGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAA 184 (508)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHH
Confidence 3333333334433344455555554411 11222223333346777777766665543 34454333344444444444
Q ss_pred H
Q 008615 536 L 536 (559)
Q Consensus 536 ~ 536 (559)
+
T Consensus 185 v 185 (508)
T COG4262 185 V 185 (508)
T ss_pred H
Confidence 3
No 313
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=68.72 E-value=11 Score=30.84 Aligned_cols=32 Identities=13% Similarity=0.085 Sum_probs=23.6
Q ss_pred ccceeecccCCccchhhHHHHHHHHHHHHHHH
Q 008615 475 ISWLMVSEIFPLRTRGRGISLAVLTNFGSNAI 506 (559)
Q Consensus 475 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i 506 (559)
+.|.+++....++..|...|+-.+-.+++...
T Consensus 114 isYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 114 ISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 44556666677788899999998888776543
No 314
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=68.14 E-value=1.2e+02 Score=29.45 Aligned_cols=55 Identities=15% Similarity=0.015 Sum_probs=34.6
Q ss_pred HHHhHHHHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhH
Q 008615 379 VLYYAGPILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGV 433 (559)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 433 (559)
..+-...++..++.++.........+-+...++...+.|...|+..|+|++...+
T Consensus 46 W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L 100 (503)
T KOG2601|consen 46 WEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL 100 (503)
T ss_pred HHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH
Confidence 3334445556666654445555555555666666677788889999987765443
No 315
>PRK11469 hypothetical protein; Provisional
Probab=67.93 E-value=44 Score=28.88 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHH-HHHHhhhhhchHH
Q 008615 96 WSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSI-LVYSIADFLGRKR 174 (559)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~-~~g~l~dr~Grr~ 174 (559)
++.....-+..++-.+..|...+. .|.+.........+..+....... ++.++.+++|+|.
T Consensus 105 ~~~~l~LaiAtSiDAlavGi~~~~------------------~g~~~~~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a 166 (188)
T PRK11469 105 FWLLVTTAIATSLDAMAVGVGLAF------------------LQVNIIATALAIGCATLIMSTLGMMVGRFIGSIIGKKA 166 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------------------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444455555555555443 344444444444444444444444 4455667788888
Q ss_pred HHHHHHHHHHHHHHH
Q 008615 175 ELIIAAVLYALGALT 189 (559)
Q Consensus 175 ~~~~~~~~~~i~~~~ 189 (559)
-++-|.++..+|.-.
T Consensus 167 ~~lgG~iLI~iGi~i 181 (188)
T PRK11469 167 EILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877776543
No 316
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=66.08 E-value=21 Score=33.95 Aligned_cols=110 Identities=15% Similarity=0.129 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhchH--HHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhh
Q 008615 145 LGLVVSGSLYGALLGSILVYSIADFLGRK--RELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIA 222 (559)
Q Consensus 145 ~g~~~s~~~l~~~i~~~~~g~l~dr~Grr--~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 222 (559)
-|..-.+..+..+++.+..|.+--++.|. ..+.++.+..+...++++-+++.|..+++-++.+.-.....+++..-++
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA 352 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIA 352 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHH
Confidence 35566677788889999999998877765 3445556666666677777889999888888888777778888888888
Q ss_pred ccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 008615 223 ETCPSQIRGTLISLKELFIVLGILLGYFVGSFQIN 257 (559)
Q Consensus 223 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 257 (559)
+....+.-|..+|+.... +.++-.++.....+
T Consensus 353 ~nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd 384 (433)
T KOG3810|consen 353 RNLSSELFGLVFGINTFV---ALILQSILTLIVVD 384 (433)
T ss_pred HhhhhhhheeeeehHHHH---HHHHHHhheEEEEc
Confidence 888888888888876543 34445555555554
No 317
>PRK10263 DNA translocase FtsK; Provisional
Probab=58.44 E-value=67 Score=36.57 Aligned_cols=19 Identities=21% Similarity=0.350 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHhhhhhch
Q 008615 154 YGALLGSILVYSIADFLGR 172 (559)
Q Consensus 154 l~~~i~~~~~g~l~dr~Gr 172 (559)
++..+|..+...+..-||-
T Consensus 63 l~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 63 LGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred ccchHHHHHHHHHHHHHhH
Confidence 4444444444444444553
No 318
>PRK10263 DNA translocase FtsK; Provisional
Probab=58.34 E-value=27 Score=39.48 Aligned_cols=19 Identities=16% Similarity=0.167 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHhhhcC
Q 008615 406 GVFKLVMTWIAVAKVDDLG 424 (559)
Q Consensus 406 ~~~~~~~~~~~g~l~d~~~ 424 (559)
+.++.+|..+...+..-+|
T Consensus 62 Nl~GiVGA~LAD~L~~LFG 80 (1355)
T PRK10263 62 NLGGMPGAWLADTLFFIFG 80 (1355)
T ss_pred cccchHHHHHHHHHHHHHh
Confidence 4555555555555555555
No 319
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=55.66 E-value=1.9e+02 Score=29.85 Aligned_cols=72 Identities=11% Similarity=0.233 Sum_probs=32.6
Q ss_pred hhhcccCchhHHHHHHHHHHHHHhhChhhHHHhHHHHHHHcCCCCchh----HHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 008615 350 LEVFQGPNLKAFIIGGGLVLFQQITGQPSVLYYAGPILQSAGFSAAAD----ATRVSVVIGVFKLVMTWIAVAKVDDLGR 425 (559)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 425 (559)
.|+||.|... .+++.++....+.. +......++...|.-.... .......+.+.+.+++.+++++-..++.
T Consensus 252 gDVFR~P~~~-~lls~lvG~G~Qll----~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 252 GDVFRPPKHP-MLLSALVGTGIQLL----FMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHhcCcCCc-hHHHhHhcchhhhh----HHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 4778887643 34444444443332 2222222233333332222 2233444445555555556665555655
Q ss_pred c
Q 008615 426 R 426 (559)
Q Consensus 426 ~ 426 (559)
+
T Consensus 327 ~ 327 (521)
T PF02990_consen 327 K 327 (521)
T ss_pred C
Confidence 3
No 320
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=51.89 E-value=25 Score=33.45 Aligned_cols=16 Identities=6% Similarity=0.090 Sum_probs=11.5
Q ss_pred hhhhchHHHHHHHHHH
Q 008615 167 ADFLGRKRELIIAAVL 182 (559)
Q Consensus 167 ~dr~Grr~~~~~~~~~ 182 (559)
.||+--.|++...+-+
T Consensus 208 ~e~ft~sKllav~~si 223 (416)
T KOG2765|consen 208 VERFTLSKLLAVFVSI 223 (416)
T ss_pred cchhhHHHHHHHHHhh
Confidence 8999988877654433
No 321
>COG4769 Predicted membrane protein [Function unknown]
Probab=51.30 E-value=21 Score=29.45 Aligned_cols=51 Identities=20% Similarity=0.209 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHh
Q 008615 152 SLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGL 208 (559)
Q Consensus 152 ~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~ 208 (559)
+.+..++.+...-++..++|+|.+-.+|...+ -++.+|..++++.+++.|-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhc
Confidence 34455566666667778888887755554333 3567888888888888764
No 322
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=50.29 E-value=5.3 Score=35.86 Aligned_cols=13 Identities=15% Similarity=0.220 Sum_probs=0.0
Q ss_pred HHHHHhhccCCCC
Q 008615 535 VLFIVRTVPETKG 547 (559)
Q Consensus 535 ~~~~~~~~~~~~~ 547 (559)
++++|+++.+.+.
T Consensus 178 aiLIWlY~H~~~~ 190 (381)
T PF05297_consen 178 AILIWLYVHDQRH 190 (381)
T ss_dssp -------------
T ss_pred HHHHHHHhcCCCC
Confidence 3445666666553
No 323
>PF04346 EutH: Ethanolamine utilisation protein, EutH; InterPro: IPR007441 EutH is a bacterial membrane protein whose molecular function is unknown. It has been suggested that it may act as an ethanolamine transporter, responsible for carrying ethanolamine from the periplasm to the cytoplasm [].; GO: 0006810 transport, 0016021 integral to membrane
Probab=48.96 E-value=2.5e+02 Score=26.94 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHH---HHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhh
Q 008615 144 QLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLY---ALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLY 220 (559)
Q Consensus 144 ~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~---~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~ 220 (559)
.+|.+..+..+...+ .++.+++.+.+|.-+.+..+.++. +--.+...++.|......+-.+.|.-.|....-...+
T Consensus 48 m~GI~~laP~la~~l-~~vi~Pl~~~~GaDPamfa~tiLA~DMGGY~LA~~la~~~~~~~fsG~ilgsmlG~TIvFtIPV 126 (354)
T PF04346_consen 48 MAGIMALAPVLAAFL-SPVIGPLFQAIGADPAMFAGTILANDMGGYQLAMELAQDPEAGIFSGLILGSMLGATIVFTIPV 126 (354)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhcCcCHHHHHHHcCChhhHHHHHHHHHHhhcccEEeehhh
Confidence 445555555555444 556788999999999998887774 3445666778887777777677766555544433333
Q ss_pred hhccCCccc-chhhhhHHHHH--HHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHH
Q 008615 221 IAETCPSQI-RGTLISLKELF--IVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMG 277 (559)
Q Consensus 221 i~~~~~~~~-r~~~~~~~~~~--~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~ 277 (559)
.-...++++ +-.+.|+.... ..+|.++|.++.++ +|...+.-...+.+++.
T Consensus 127 aLgii~k~D~~y~a~Gil~GiitIPiG~~vggl~~g~------~~~~il~Nl~Pvii~~~ 180 (354)
T PF04346_consen 127 ALGIIEKEDHKYLAKGILAGIITIPIGCFVGGLIAGF------DIGMILINLIPVIIFAI 180 (354)
T ss_pred hhhhcChhhhHHHHHHHHHHHhhhCHHHHHHHHHHhC------CHHHHHHHHHHHHHHHH
Confidence 333444433 33344443322 23455555554432 56655554444444333
No 324
>PF06638 Strabismus: Strabismus protein; InterPro: IPR009539 This family consists of several strabismus (STB) or Van Gogh-like (VANGL) proteins 1 and 2. The exact function of this family is unknown. It is thought, however that STB1 gene and STB2 may be potent tumour suppressor gene candidates [].; GO: 0007275 multicellular organismal development, 0016021 integral to membrane
Probab=48.47 E-value=65 Score=32.18 Aligned_cols=13 Identities=15% Similarity=0.005 Sum_probs=10.4
Q ss_pred chhHhHHHHHHHH
Q 008615 193 APGLGVLLVGRLL 205 (559)
Q Consensus 193 ~~~~~~l~~~r~l 205 (559)
.-+||.|++.|++
T Consensus 178 ~~syWLFY~vrIl 190 (505)
T PF06638_consen 178 LFSYWLFYGVRIL 190 (505)
T ss_pred HHHHHHHhhheee
Confidence 4578999988877
No 325
>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=48.16 E-value=2e+02 Score=25.69 Aligned_cols=25 Identities=12% Similarity=0.125 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHhhhcCCcchhhhhH
Q 008615 409 KLVMTWIAVAKVDDLGRRPLLIGGV 433 (559)
Q Consensus 409 ~~~~~~~~g~l~d~~~~~~~~~~~~ 433 (559)
..+.-++.|++.-++..++....+.
T Consensus 180 ~~~~L~~~G~~~~~~~~~~~~~~~l 204 (225)
T cd02434 180 VAFTLFLLGSFKSKLYNGKWIISGI 204 (225)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHH
Confidence 4555566777777776666654433
No 326
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=48.04 E-value=1.9e+02 Score=25.37 Aligned_cols=23 Identities=4% Similarity=-0.269 Sum_probs=14.2
Q ss_pred cchHHHhhhHHHHHHHHHHhhcc
Q 008615 261 GWRYMYGLSAPLALLMGIGMWSL 283 (559)
Q Consensus 261 ~wr~~f~~~~~~~~~~~~~~~~~ 283 (559)
+-+.+.|+..++++++.++.+++
T Consensus 175 np~l~~~~~iiig~i~~~~~~~l 197 (206)
T PF06570_consen 175 NPVLPPWVYIIIGVIAFALRFYL 197 (206)
T ss_pred CcCCCHHHHHHHHHHHHHHHHHH
Confidence 45556666666776666666543
No 327
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=47.99 E-value=81 Score=26.01 Aligned_cols=26 Identities=31% Similarity=0.468 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhchHH
Q 008615 149 VSGSLYGALLGSILVYSIADFLGRKR 174 (559)
Q Consensus 149 ~s~~~l~~~i~~~~~g~l~dr~Grr~ 174 (559)
+.-|.+++.+...+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45688899999999999999988764
No 328
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=46.99 E-value=78 Score=27.15 Aligned_cols=24 Identities=21% Similarity=0.432 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhch
Q 008615 149 VSGSLYGALLGSILVYSIADFLGR 172 (559)
Q Consensus 149 ~s~~~l~~~i~~~~~g~l~dr~Gr 172 (559)
+.-|.+++.+...+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456788999999999999999985
No 329
>COG1971 Predicted membrane protein [Function unknown]
Probab=45.55 E-value=2e+02 Score=24.80 Aligned_cols=39 Identities=26% Similarity=0.418 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHH
Q 008615 151 GSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALT 189 (559)
Q Consensus 151 ~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~ 189 (559)
+..+...++..++.++...+|.|--++.|.++..++.-.
T Consensus 145 ~T~il~~~G~~IG~~~g~~~g~~ae~lgGiiLI~~G~~i 183 (190)
T COG1971 145 ITLILSALGAIIGRKLGKFLGKYAEILGGIILIGIGVKI 183 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 333444555566666667778888888888877776543
No 330
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=42.41 E-value=50 Score=25.10 Aligned_cols=51 Identities=20% Similarity=0.109 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc
Q 008615 143 VQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA 193 (559)
Q Consensus 143 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 193 (559)
...|=+.++|.-.+.+.++++++..|+.-+.+.=.+|..++.++.....+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 445677889999999999999999999988888888888777777665443
No 331
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=41.41 E-value=1.6e+02 Score=22.39 Aligned_cols=29 Identities=0% Similarity=-0.255 Sum_probs=13.5
Q ss_pred HHHHHHHHHhhhcCCcchhhhhHHHHHHH
Q 008615 411 VMTWIAVAKVDDLGRRPLLIGGVCGIALS 439 (559)
Q Consensus 411 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 439 (559)
+|.+++-|+-++++....+.+.+++.+++
T Consensus 58 ~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 58 LGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 33344444444566555544444444443
No 332
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=38.17 E-value=3.3e+02 Score=25.29 Aligned_cols=41 Identities=10% Similarity=0.148 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHH
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIAL 438 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 438 (559)
.++++=+.+..+..++.+.+ ++-||+.|-....++....++
T Consensus 99 leaSLGY~InPL~~VllG~l--flkErls~~Q~iAV~lA~~GV 139 (293)
T COG2962 99 LEASLGYFINPLVNVLLGRL--FLKERLSRLQWIAVGLAAAGV 139 (293)
T ss_pred hHHHhHHHHHHHHHHHHHHH--HHHhhccHHHHHHHHHHHHHH
Confidence 34444444444444332222 355777766655544444333
No 333
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=38.06 E-value=1.2e+02 Score=20.15 Aligned_cols=45 Identities=13% Similarity=0.236 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHHHHHHhhccCCc
Q 008615 241 IVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALLMGIGMWSLPPS 286 (559)
Q Consensus 241 ~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e~ 286 (559)
.-+|.++|.+.+...-..+ ++.....+..+.+++..++.-.+|+.
T Consensus 11 ~il~~vvgyI~ssL~~~~~-n~~~~~Ii~vi~~i~~~~~~~~i~~~ 55 (57)
T PF11151_consen 11 FILGEVVGYIGSSLTGVTY-NFTTAAIIAVIFGIIVANIIAVIPKK 55 (57)
T ss_pred HHHHHHHHHHHHHHhCCCC-ChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 4456666666555544444 67777777777777766665555543
No 334
>PF06123 CreD: Inner membrane protein CreD; InterPro: IPR010364 This family consists of several bacterial CreD or Cet inner membrane proteins. Dominant mutations of the cet gene of Escherichia coli result in tolerance to colicin E2 and increased amounts of an inner membrane protein with a Mr of 42,000. The cet gene is shown to be in the same operon as the phoM gene, which is required in a phoR background for expression of the structural gene for alkaline phosphatase, phoA. Although the Cet protein is not required for phoA expression, it has been suggested that the Cet protein has an enhancing effect on the transcription of phoA [].
Probab=37.85 E-value=3.8e+02 Score=26.79 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=14.0
Q ss_pred HHHHHHHhhhcCCcchhhhhHHHHHHHH
Q 008615 413 TWIAVAKVDDLGRRPLLIGGVCGIALSL 440 (559)
Q Consensus 413 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 440 (559)
.+++-++.+.+.++++..+=.++.++++
T Consensus 308 TF~~fflfE~~~~~~iHpiQY~LVGlAl 335 (430)
T PF06123_consen 308 TFLAFFLFELLSKLRIHPIQYLLVGLAL 335 (430)
T ss_pred HHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 3344455566666665544444444433
No 335
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=37.20 E-value=2.8e+02 Score=24.39 Aligned_cols=73 Identities=16% Similarity=0.165 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHHhhhcccccccccccccccCCCCCCccccccchhHHHHHHHHHHHHHHHHHH-HHHHhhhh--hc
Q 008615 95 SWSSVILPFLFPALGGLLFGYDIGATSGATISLQSPELSGTTWFNLSAVQLGLVVSGSLYGALLGSI-LVYSIADF--LG 171 (559)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l~~~i~~~-~~g~l~dr--~G 171 (559)
+++..+..-+..++-.+..|+..+. .|.+.........+..+....... ++.++.++ .|
T Consensus 127 ~~~e~l~L~iAlSiDalavG~s~~~------------------~g~~~~~~~~~igivs~i~~~~G~~lG~~~~~~~~~g 188 (206)
T TIGR02840 127 SGKEALLLGIALSLDAFGAGIGASL------------------LGLNPLATSILVAVMSFIFVSLGLFLGKKISKKSIIG 188 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH------------------hCccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 3444444445555555666655544 344444444444444444333333 33334554 36
Q ss_pred hHHHHHHHHHHHHHH
Q 008615 172 RKRELIIAAVLYALG 186 (559)
Q Consensus 172 rr~~~~~~~~~~~i~ 186 (559)
++. ++-|.++..+|
T Consensus 189 ~~a-~igGliLI~iG 202 (206)
T TIGR02840 189 KFS-FLSGILLILLG 202 (206)
T ss_pred chH-HHHHHHHHHHH
Confidence 666 77777766665
No 336
>PRK11715 inner membrane protein; Provisional
Probab=36.71 E-value=4.5e+02 Score=26.36 Aligned_cols=29 Identities=17% Similarity=0.074 Sum_probs=15.0
Q ss_pred HHHHHHHhhhcCCcchhhhhHHHHHHHHH
Q 008615 413 TWIAVAKVDDLGRRPLLIGGVCGIALSLL 441 (559)
Q Consensus 413 ~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 441 (559)
.+++-++.+..+++++..+=.++.+++..
T Consensus 314 TF~~fFlfE~~~~~~iHpiQYlLVGlAl~ 342 (436)
T PRK11715 314 TFAAFFLFELLKKLRIHPVQYLLVGLALV 342 (436)
T ss_pred HHHHHHHHHHhcCceecHHHHHHHHHHHH
Confidence 34444556777776665544444444333
No 337
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=36.60 E-value=4.2e+02 Score=25.94 Aligned_cols=18 Identities=17% Similarity=0.091 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHhhhhhc
Q 008615 154 YGALLGSILVYSIADFLG 171 (559)
Q Consensus 154 l~~~i~~~~~g~l~dr~G 171 (559)
+...+.....|++..|+|
T Consensus 6 i~~i~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 334445555566666553
No 338
>PRK02237 hypothetical protein; Provisional
Probab=36.06 E-value=2e+02 Score=22.08 Aligned_cols=51 Identities=24% Similarity=0.171 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc
Q 008615 143 VQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA 193 (559)
Q Consensus 143 ~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~ 193 (559)
+..|=+.++|.-.+.+.++++++..|+.-+-+.=.+|..+..+|..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 347778899999999999999999999988777777877777776655443
No 339
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=35.43 E-value=1.6e+02 Score=29.40 Aligned_cols=98 Identities=18% Similarity=0.208 Sum_probs=65.1
Q ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc---hhHhHHHHHHHHHHhhhhhhh
Q 008615 138 FNLSAVQLGLVVSGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYA---PGLGVLLVGRLLYGLGIGLAM 214 (559)
Q Consensus 138 ~~~s~~~~g~~~s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~---~~~~~l~~~r~l~G~~~g~~~ 214 (559)
+|++.++...+.+.-.+..+++.++--....++|-|-....+.-...++-+..... ......+.+-+..|+..-...
T Consensus 44 ~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~ 123 (451)
T COG2233 44 LGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLIS 123 (451)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988775544665655555544444444444433 236666666666676555444
Q ss_pred hhhhhhhhccCCcccchhhhh
Q 008615 215 HGAPLYIAETCPSQIRGTLIS 235 (559)
Q Consensus 215 ~~~~~~i~~~~~~~~r~~~~~ 235 (559)
+.....+...+||---|..+.
T Consensus 124 ~~~~~~l~rlfPPvVtG~Vi~ 144 (451)
T COG2233 124 PIVKIRLARLFPPVVTGPVVL 144 (451)
T ss_pred HHHHHHHHHhCCCceEEeEee
Confidence 433337888888865555443
No 340
>PRK11588 hypothetical protein; Provisional
Probab=34.75 E-value=5.2e+02 Score=26.50 Aligned_cols=40 Identities=8% Similarity=0.046 Sum_probs=24.3
Q ss_pred HHhhhhhchHH--HHHHHHHHHHHHHHHHHhchhHhHHHHHH
Q 008615 164 YSIADFLGRKR--ELIIAAVLYALGALTTAYAPGLGVLLVGR 203 (559)
Q Consensus 164 g~l~dr~Grr~--~~~~~~~~~~i~~~~~~~~~~~~~l~~~r 203 (559)
+++.+|++.|. ++.+.+++++++....+++.....++-.-
T Consensus 137 ~~l~~k~~~~~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~ 178 (506)
T PRK11588 137 LALIRKTRGNEILFIPVLFILFSLGGAVFGMGEEAIAFAIII 178 (506)
T ss_pred HHHHHHhCCCcEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 56677887663 34455666777777777766554444433
No 341
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=34.19 E-value=3.3e+02 Score=25.46 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=34.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 199 LLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 199 l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
.-..|.+.|+-.- .+..+++++.-.||++++--..--.....+++.++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567888888654 4566888899999865543333333444455555666665554
No 342
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=33.53 E-value=2.1e+02 Score=21.67 Aligned_cols=34 Identities=9% Similarity=-0.059 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhhh-hhchHHHHHHHHHHHHHH
Q 008615 153 LYGALLGSILVYSIAD-FLGRKRELIIAAVLYALG 186 (559)
Q Consensus 153 ~l~~~i~~~~~g~l~d-r~Grr~~~~~~~~~~~i~ 186 (559)
.+...+...+.|...| +||-++.+.+.+++.+++
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3444455566677777 567666555555444443
No 343
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=33.43 E-value=2.2e+02 Score=21.85 Aligned_cols=64 Identities=19% Similarity=0.136 Sum_probs=38.1
Q ss_pred HHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhc-hhHhHHHHHHHHHHhhhhhhhhhhhhhhhc
Q 008615 160 SILVYSIADFLGRKRELIIAAVLYALGALTTAYA-PGLGVLLVGRLLYGLGIGLAMHGAPLYIAE 223 (559)
Q Consensus 160 ~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~ 223 (559)
.-..=+.+|.|.|+...+...+.++++..+.+.+ ++.+.=.+--+..|+|..........+..|
T Consensus 17 ~~~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E 81 (106)
T COG2076 17 GTTLLKYSDGFTRLWPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGE 81 (106)
T ss_pred HHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3344567788888888888888777777777665 333333344455666655444444433333
No 344
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=33.34 E-value=1.6e+02 Score=20.87 Aligned_cols=59 Identities=19% Similarity=0.129 Sum_probs=35.6
Q ss_pred hhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCccc
Q 008615 167 ADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQI 229 (559)
Q Consensus 167 ~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~ 229 (559)
-|+-.|++-+.+.+.+-..+.++..+....+++-+. . ++.+...|-...++++--++++
T Consensus 11 ~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~~~la~~---~-~~~av~LPwvAVviAN~~~~~~ 69 (73)
T PF11298_consen 11 QDQRRRRRRYLIMMGIRIPCFVLAAVVYRLGWLAWA---I-IVGAVPLPWVAVVIANARPPRR 69 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH---H-HHHhcccchhheeeccCCCCCC
Confidence 467778888888888888877777776654222211 1 1234455666666665444443
No 345
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=32.42 E-value=7.1e+02 Score=27.33 Aligned_cols=37 Identities=11% Similarity=0.025 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHH
Q 008615 236 LKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLA 273 (559)
Q Consensus 236 ~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~ 273 (559)
+...+..++.++..+++.+++... +|...+++.++++
T Consensus 105 Ll~~~M~lT~livAL~a~~Li~GL-~~~~ALLLGAILA 141 (810)
T TIGR00844 105 LLVPVMTSGWLVIALFVWILVPGL-NFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhhc
Confidence 344444555555555555443333 6766666666554
No 346
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=30.17 E-value=2.1e+02 Score=20.97 Aligned_cols=42 Identities=17% Similarity=0.101 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHhhhhhch-------HHHHHHHHHHHHHHHHHHHhchhH
Q 008615 155 GALLGSILVYSIADFLGR-------KRELIIAAVLYALGALTTAYAPGL 196 (559)
Q Consensus 155 ~~~i~~~~~g~l~dr~Gr-------r~~~~~~~~~~~i~~~~~~~~~~~ 196 (559)
+.....+.++++.+|.-+ ++.+.++.++...+.++++..+|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 444555666677666554 778888888888888888776553
No 347
>PRK04201 zinc transporter ZupT; Provisional
Probab=28.76 E-value=4.7e+02 Score=24.11 Aligned_cols=22 Identities=14% Similarity=0.255 Sum_probs=11.9
Q ss_pred HHHHHhhhhhhhhhhhhhhhccCCc
Q 008615 203 RLLYGLGIGLAMHGAPLYIAETCPS 227 (559)
Q Consensus 203 r~l~G~~~g~~~~~~~~~i~~~~~~ 227 (559)
-++++++.|...-+ .+.|+.|+
T Consensus 215 ~~~l~~aaG~~lyv---~~~el~pe 236 (265)
T PRK04201 215 GAIFAAVAGIMVFI---SLDELLPA 236 (265)
T ss_pred HHHHHHHHHHHHHH---HHHHHHHH
Confidence 35667766654333 24566654
No 348
>PRK09609 hypothetical protein; Provisional
Probab=27.78 E-value=5.2e+02 Score=24.37 Aligned_cols=12 Identities=25% Similarity=0.326 Sum_probs=5.7
Q ss_pred cchHHHhhhHHH
Q 008615 261 GWRYMYGLSAPL 272 (559)
Q Consensus 261 ~wr~~f~~~~~~ 272 (559)
.|...|-+.+.+
T Consensus 77 ~ffPgFTLsa~l 88 (312)
T PRK09609 77 VYHPYYTLAAMV 88 (312)
T ss_pred ccCHHHHHHHHH
Confidence 455555544433
No 349
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=27.68 E-value=2.5e+02 Score=24.42 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=24.7
Q ss_pred cccchhhhhHHHHHHHHHHHHHHHhhhcccC
Q 008615 227 SQIRGTLISLKELFIVLGILLGYFVGSFQIN 257 (559)
Q Consensus 227 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 257 (559)
.++.+++.++...+..+|.++|.++..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4567888888888888888998888877644
No 350
>PRK02237 hypothetical protein; Provisional
Probab=27.52 E-value=2e+02 Score=22.10 Aligned_cols=47 Identities=13% Similarity=0.023 Sum_probs=36.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHH
Q 008615 397 DATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLL 443 (559)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 443 (559)
..|-.+..++...++.+++.++..|+....+.=.++..++.++..++
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 47888888999999999999999999887776666666655555443
No 351
>PLN02601 beta-carotene hydroxylase
Probab=27.19 E-value=4.4e+02 Score=24.16 Aligned_cols=25 Identities=16% Similarity=0.236 Sum_probs=11.9
Q ss_pred HHHHHHhhcccccccceeecccCCc
Q 008615 462 LLYVGCYQISFGPISWLMVSEIFPL 486 (559)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~p~ 486 (559)
.+...++++.+.-+-..++.+.+|-
T Consensus 214 GlGITlYGiaYffVHDgLVHqRfp~ 238 (303)
T PLN02601 214 GLGITVFGMAYMFVHDGLVHKRFPV 238 (303)
T ss_pred HHhHHHHHHHHHHHhhhhhcccccc
Confidence 3344444444444444555555553
No 352
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=26.80 E-value=1.6e+02 Score=22.52 Aligned_cols=48 Identities=17% Similarity=0.042 Sum_probs=37.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHH
Q 008615 396 ADATRVSVVIGVFKLVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLL 443 (559)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 443 (559)
...+-.+..++...++.+++.++..|+..+.+.=.++..++.++..++
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI 101 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAII 101 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHhe
Confidence 467788888999999999999999999888777666666555554443
No 353
>PRK15015 carbon starvation protein A; Provisional
Probab=26.67 E-value=8e+02 Score=26.13 Aligned_cols=103 Identities=13% Similarity=0.035 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhh-hhhccCCcccc
Q 008615 152 SLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPL-YIAETCPSQIR 230 (559)
Q Consensus 152 ~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~-~i~~~~~~~~r 230 (559)
......++..-+|.++-+-|...- ++.+..++......+-.++.-++.+=+.++=-.-..|...- ==.|+.|.+++
T Consensus 10 w~~~a~~ga~~~~~~al~rge~mn---al~lv~aa~~~y~iaYrfYgr~ia~kv~~lD~~r~TPA~~~~DG~DYvPt~k~ 86 (701)
T PRK15015 10 WTVLSVMGAFALGYIALNRGEQIN---ALWIVVASVCIYLIAYRFYGLYIAKNVLAVDPTRMTPAVRHNDGLDYVPTDKK 86 (701)
T ss_pred HHHHHHHHHHHheeeeecCCCchh---HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCCceECCCCCCcCcCCcc
Confidence 334455666666777665555421 11222222222333333443334444444433322222111 12466766544
Q ss_pred hhhhhH-HHHHHHHHHHHHHHhhhcccCCCCcch
Q 008615 231 GTLISL-KELFIVLGILLGYFVGSFQINAVGGWR 263 (559)
Q Consensus 231 ~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~~~wr 263 (559)
..+|- +.+..+.|+++||.++... ||-
T Consensus 87 -VLfGHHFasIAGAGPivGPvlAa~~-----Gwl 114 (701)
T PRK15015 87 -VLFGHHFAAIAGAGPLVGPVLAAQM-----GYL 114 (701)
T ss_pred -chhHHHHHHHhccCccHHHHHHHHH-----cch
Confidence 55554 4566778889999988753 775
No 354
>PF01405 PsbT: Photosystem II reaction centre T protein; InterPro: IPR001743 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbT found in PSII, which is thought to be associated with the D1 (PsbA) - D2 (PsbD) heterodimer. PsbT may be involved in the formation and/or stabilisation of dimeric PSII complexes, because in the absence of this protein dimeric PSII complexes were found to be less abundant. Furthermore, although PsbT does not confer photo-protection, it is required for the efficient recovery of photo-damaged PSII [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3BZ1_T 1S5L_t 2AXT_t 3KZI_T 3PRQ_T 3BZ2_T 3PRR_T 4FBY_g 3A0H_t 3A0B_T ....
Probab=25.77 E-value=1.2e+02 Score=16.87 Aligned_cols=12 Identities=17% Similarity=-0.014 Sum_probs=4.4
Q ss_pred HHHhhccCCchH
Q 008615 277 GIGMWSLPPSPR 288 (559)
Q Consensus 277 ~~~~~~~~e~p~ 288 (559)
+....++.|+|+
T Consensus 17 lffAI~FRePPr 28 (29)
T PF01405_consen 17 LFFAIFFREPPR 28 (29)
T ss_dssp HHHHHHSS----
T ss_pred HHhhhhccCCCC
Confidence 334466777775
No 355
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=25.75 E-value=3.1e+02 Score=21.11 Aligned_cols=48 Identities=8% Similarity=-0.137 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCc
Q 008615 180 AVLYALGALTTAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPS 227 (559)
Q Consensus 180 ~~~~~i~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~ 227 (559)
+++..+++++.++......---.|.+.+.|..+.++...++..|...-
T Consensus 33 l~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 33 LIANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHHH
Confidence 345555665555432211001133344555555566677777777653
No 356
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=25.74 E-value=5.4e+02 Score=23.82 Aligned_cols=34 Identities=18% Similarity=0.068 Sum_probs=23.6
Q ss_pred HhcCchhhHHHHHHHHHHHHHHHHhhccCCCCCC
Q 008615 516 ELLGAENIFLLFAAIAFLAVLFIVRTVPETKGLS 549 (559)
Q Consensus 516 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 549 (559)
+..|....|.+.=...+++.+.-.++++|+|.++
T Consensus 217 ~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~k 250 (269)
T PF06800_consen 217 QKNGVATAFTLSQLGVVISTLGGIFILKEKKTKK 250 (269)
T ss_pred HhccchhhhhHHhHHHHHHHhhhheEEEecCchh
Confidence 3567767777666666677777778888887654
No 357
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=24.92 E-value=1.5e+02 Score=28.37 Aligned_cols=17 Identities=12% Similarity=0.067 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHhhhc
Q 008615 407 VFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 407 ~~~~~~~~~~g~l~d~~ 423 (559)
+...+...+--++.++.
T Consensus 178 ~lya~~nV~~E~~v~~~ 194 (334)
T PF06027_consen 178 ILYAVSNVLEEKLVKKA 194 (334)
T ss_pred HHHHHHHHHHHHhcccC
Confidence 34444444444444443
No 358
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=23.97 E-value=7.5e+02 Score=24.90 Aligned_cols=44 Identities=20% Similarity=-0.007 Sum_probs=32.0
Q ss_pred CcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHHHhhhHHHHHH
Q 008615 226 PSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYMYGLSAPLALL 275 (559)
Q Consensus 226 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~f~~~~~~~~~ 275 (559)
.+.+.+..+++..++.+.|...-|+..+. +|-|+..+..+++..
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~------~Gf~p~lillll~~p 61 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGF------GGLIPILLMLVLAYP 61 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhc------chHHHHHHHHHHHHH
Confidence 45567788999999999999999988776 565665555544443
No 359
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=23.62 E-value=7.8e+02 Score=25.47 Aligned_cols=39 Identities=13% Similarity=0.184 Sum_probs=22.7
Q ss_pred HHHHHcCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008615 385 PILQSAGFSAAADATRVSVVIGVFKLVMTWIAVAKVDDL 423 (559)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 423 (559)
.++.-+|+-++..-|.+++...+..++.++++|+.+-|+
T Consensus 348 i~fA~lGflSPs~RGsLmT~~~~l~v~~G~~agY~s~rl 386 (628)
T KOG1278|consen 348 IFFACLGFLSPSSRGSLMTAMVLLFVFMGFVAGYVSARL 386 (628)
T ss_pred HHHHHhccCCccccccHHHHHHHHHHHHHHhhhhhhhhh
Confidence 334455655445555555555566666666777766664
No 360
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=22.79 E-value=2.3e+02 Score=31.35 Aligned_cols=7 Identities=29% Similarity=0.169 Sum_probs=2.9
Q ss_pred Hhhhhhc
Q 008615 165 SIADFLG 171 (559)
Q Consensus 165 ~l~dr~G 171 (559)
+++.++|
T Consensus 954 ~~at~IG 960 (1096)
T TIGR00927 954 WWAHQVG 960 (1096)
T ss_pred HHHHHhh
Confidence 3444444
No 361
>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family. Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.
Probab=22.69 E-value=5.7e+02 Score=23.06 Aligned_cols=26 Identities=15% Similarity=-0.038 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHhhhcCCcchhhhhH
Q 008615 408 FKLVMTWIAVAKVDDLGRRPLLIGGV 433 (559)
Q Consensus 408 ~~~~~~~~~g~l~d~~~~~~~~~~~~ 433 (559)
...+.-++.|.+.-|+++++....+.
T Consensus 188 ~~~~~L~~lG~~~a~~s~~~~~~~~l 213 (234)
T cd02433 188 LVGLALLATGAVTGLLSGRSPGISAL 213 (234)
T ss_pred HHHHHHHHHHHHHHhhCCCcHHHHHH
Confidence 34455556666667777766654433
No 362
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=22.54 E-value=2.7e+02 Score=19.19 Aligned_cols=31 Identities=26% Similarity=0.338 Sum_probs=16.4
Q ss_pred cCchhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 518 LGAENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 518 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
.||..++.+...+.+++.-++-..+||..+.
T Consensus 28 ag~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 28 AGYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 3444445444444444444455667776654
No 363
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=22.52 E-value=2.2e+02 Score=18.11 Aligned_cols=11 Identities=9% Similarity=0.057 Sum_probs=4.6
Q ss_pred HHHHHHHHhhH
Q 008615 502 GSNAIVTFAFS 512 (559)
Q Consensus 502 ~g~~i~~~i~g 512 (559)
+|+.++..+.+
T Consensus 6 iGa~vGg~l~~ 16 (48)
T PF04226_consen 6 IGAFVGGWLFG 16 (48)
T ss_pred HHHHHHHHHHH
Confidence 34444444433
No 364
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=22.43 E-value=6.6e+02 Score=23.71 Aligned_cols=97 Identities=13% Similarity=0.055 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhhhcCCcchhhhhHHHHHHHHHHHHHHHHhhcCchhHHHHHHHHHHHHhhcccccccceeecccCCccch
Q 008615 410 LVMTWIAVAKVDDLGRRPLLIGGVCGIALSLLLLSAYYKILGGFPLVAVSALLLYVGCYQISFGPISWLMVSEIFPLRTR 489 (559)
Q Consensus 410 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 489 (559)
++..-+++.+++|-|.-++-+=+..+.+.....+.. ....++|..+....+....++... .+.......++-
T Consensus 21 LllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~---~~t~spw~gl~~a~l~g~l~~ll~-----a~~ti~l~~nqi 92 (304)
T COG1079 21 LLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFA---YGTGSPWLGLLAAALVGALFGLLH-----AFLTIKLRANQI 92 (304)
T ss_pred HHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHH-----HHHHHhhccccc
Confidence 444556778889988877655444444333332221 123456655555555444443322 334444455666
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhHHH
Q 008615 490 GRGISLAVLTNFGSNAIVTFAFSPL 514 (559)
Q Consensus 490 ~~~~g~~~~~~~~g~~i~~~i~g~l 514 (559)
-++.++......+...++..+++.-
T Consensus 93 isG~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 93 ISGLALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhccC
Confidence 6677777766666666666666544
No 365
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=21.99 E-value=1e+03 Score=25.78 Aligned_cols=30 Identities=20% Similarity=0.077 Sum_probs=14.9
Q ss_pred HHHHhhhcC----CcchhhhhHHHHHHHHHHHHH
Q 008615 416 AVAKVDDLG----RRPLLIGGVCGIALSLLLLSA 445 (559)
Q Consensus 416 ~g~l~d~~~----~~~~~~~~~~~~~~~~~~~~~ 445 (559)
.+-+.|.=+ |.+-+.++.++++++.+...+
T Consensus 43 a~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~l 76 (701)
T TIGR01667 43 AAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQL 76 (701)
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455443 345555555555555554443
No 366
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=21.74 E-value=2.6e+02 Score=25.56 Aligned_cols=19 Identities=21% Similarity=0.637 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHhhhcccc
Q 008615 99 VILPFLFPALGGLLFGYDI 117 (559)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~ 117 (559)
++..+.++.+..+++|...
T Consensus 181 RivG~~LAv~aGvlyGs~f 199 (254)
T PF07857_consen 181 RIVGIILAVFAGVLYGSNF 199 (254)
T ss_pred hhHhHHHHHHHHHHHhccc
Confidence 4455666666667776553
No 367
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=21.70 E-value=49 Score=29.29 Aligned_cols=91 Identities=15% Similarity=0.196 Sum_probs=0.0
Q ss_pred HHhhhhhc-----hHHHHHHHHHHHHHHHHHHHh------chhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcccchh
Q 008615 164 YSIADFLG-----RKRELIIAAVLYALGALTTAY------APGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQIRGT 232 (559)
Q Consensus 164 g~l~dr~G-----rr~~~~~~~~~~~i~~~~~~~------~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~r~~ 232 (559)
+.++|||| -|-++-.-.+...+|++.+++ +-+.-.=.+.-.-.|+|.|.++..+..-+.+.+ ++....
T Consensus 128 aiI~ekYGldSpEgrGVl~~Yi~GTvfGtiffsllas~~a~~~~fhP~ALAMasGvGSgSMMaAa~~aL~~~~-P~~a~~ 206 (241)
T PF11299_consen 128 AIISEKYGLDSPEGRGVLGVYIIGTVFGTIFFSLLASLLASLGIFHPYALAMASGVGSGSMMAAASGALAAAY-PEMADQ 206 (241)
T ss_pred eeeehhcCCCCccccceEEEeeehhhHHHHHHHHHHHHHHhccCCCHHHHHHHcCCcHHHHHHHHHHHHHHHC-cchHHH
Q ss_pred hhhHHHHHHHHHHHHHHHhhhcc
Q 008615 233 LISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 233 ~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
..++..+..-+..+.|-.+.-++
T Consensus 207 i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 207 ILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
No 368
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=21.63 E-value=2.7e+02 Score=22.99 Aligned_cols=50 Identities=26% Similarity=0.228 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHhchhHhHHHHHHHH
Q 008615 150 SGSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALTTAYAPGLGVLLVGRLL 205 (559)
Q Consensus 150 s~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~l~~~r~l 205 (559)
-.+.++.++.+...-.+..|..||+.=.++..+ +-++++|..|++++.++
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giSi------~Gai~HN~gQl~va~~i 117 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGISI------AGAIAHNIGQLIVASLI 117 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 455667777777777788888766654444332 23455666666666554
No 369
>COG1288 Predicted membrane protein [Function unknown]
Probab=21.53 E-value=8.3e+02 Score=24.48 Aligned_cols=101 Identities=17% Similarity=0.184 Sum_probs=48.0
Q ss_pred chHHHHH-HHHHHHHHHHHHHHhchhHhHHHHHH--HHHHhhhhhhhhhhhhhhhccCCcccchhhhhHHHHHHHHHHHH
Q 008615 171 GRKRELI-IAAVLYALGALTTAYAPGLGVLLVGR--LLYGLGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILL 247 (559)
Q Consensus 171 Grr~~~~-~~~~~~~i~~~~~~~~~~~~~l~~~r--~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 247 (559)
||...++ +..++++++...++....-..++..- ++.-.|.-....+...+++ .+-|.+.++ ....+..+
T Consensus 132 G~e~llI~~l~ilFslgGt~~Gm~EEaiaFypIliPv~ialGyDsi~~va~i~lg-----t~iG~~~St---~NPF~~~I 203 (481)
T COG1288 132 GKEFLLIPVLFILFSLGGTVFGMGEEAIAFYPILIPLMVALGYDSITGVAIIYIG-----TQIGFAAST---MNPFATVI 203 (481)
T ss_pred CCeEEEeeHHHHHHHhccccccchHHHHHHHHHHHHHHHHhCCchHHHHHHHHHH-----hccchhhhh---cCchHHHH
Confidence 5555443 45566777777777765432222211 2222222222222222222 122333332 23344445
Q ss_pred HHHhhhc-ccCCCCcchHHHhhhHHHHHHHHHHh
Q 008615 248 GYFVGSF-QINAVGGWRYMYGLSAPLALLMGIGM 280 (559)
Q Consensus 248 g~~l~~~-l~~~~~~wr~~f~~~~~~~~~~~~~~ 280 (559)
+.-+++. +.+-. +||...|+......+..+.+
T Consensus 204 Aq~iAGip~~sG~-~~Riv~~v~~~~~~i~y~~~ 236 (481)
T COG1288 204 AQNIAGIPFLSGM-GLRIVVWVVFTLISIIYVYW 236 (481)
T ss_pred HhhhcCCcccccc-hHHHHHHHHHHHHHHHHHHH
Confidence 5545443 23334 89999988777666555444
No 370
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=21.38 E-value=1.1e+03 Score=25.69 Aligned_cols=139 Identities=17% Similarity=0.193 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh----hhchHHHHHHHHHHHHHHHHHHHh-chhHhHHHHHHHHHHhhhhhhhhhhhhhh
Q 008615 147 LVVSGSLYGALLGSILVYSIAD----FLGRKRELIIAAVLYALGALTTAY-APGLGVLLVGRLLYGLGIGLAMHGAPLYI 221 (559)
Q Consensus 147 ~~~s~~~l~~~i~~~~~g~l~d----r~Grr~~~~~~~~~~~i~~~~~~~-~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 221 (559)
++.-.........+.+.+-++| .-||.+-++++.++++++++...+ .+..|.+..+-++.+++.+....
T Consensus 27 ~~~~~~~~~~l~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga------ 100 (704)
T TIGR01666 27 FFDISSQSMPLILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGA------ 100 (704)
T ss_pred HhCchhHHHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH------
Q ss_pred hccCCcccchhhhhHHHHHHHHHHHHHHHhhhcccCCCCcchHH--HhhhHHHHHHHHHHh-hccCCchHHHHHhhccCC
Q 008615 222 AETCPSQIRGTLISLKELFIVLGILLGYFVGSFQINAVGGWRYM--YGLSAPLALLMGIGM-WSLPPSPRWLLLRAVQGK 298 (559)
Q Consensus 222 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~~~wr~~--f~~~~~~~~~~~~~~-~~~~e~p~~~~~~~~~~~ 298 (559)
-.+|....+.......+-.++|+...+. .|..+ +...++...+..+++ .+.|..|.
T Consensus 101 -----~G~Rya~Iaf~tLliaiytmlg~~~~~~------w~~~pllll~GalwY~llsl~~~~l~p~rp~---------- 159 (704)
T TIGR01666 101 -----VGQRYATIAFGSLLVALYTMLGYIEVNV------WFIQPVMLLCGTLWYSVVTLIVHLFFPNRPV---------- 159 (704)
T ss_pred -----hhhhHHHHHHHHHHHHHHHHhcccccch------HHHHHHHHHHHHHHHHHHHHHHHHHcCCChH----------
Q ss_pred CchhhhHHHHHHHHHhh
Q 008615 299 GSLQEYKEQAISALGKL 315 (559)
Q Consensus 299 ~~~~~~~~~~~~~~~~~ 315 (559)
+..-.+.-..+.++
T Consensus 160 ---q~~LA~~y~~La~y 173 (704)
T TIGR01666 160 ---QENLAKAFCQLAEY 173 (704)
T ss_pred ---HHHHHHHHHHHHHH
No 371
>COG1079 Uncharacterized ABC-type transport system, permease component [General function prediction only]
Probab=21.31 E-value=7e+02 Score=23.56 Aligned_cols=101 Identities=13% Similarity=-0.089 Sum_probs=60.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhchHHHHHHHHHHHHHHHHH--HHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCcc
Q 008615 151 GSLYGALLGSILVYSIADFLGRKRELIIAAVLYALGALT--TAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPSQ 228 (559)
Q Consensus 151 ~~~l~~~i~~~~~g~l~dr~Grr~~~~~~~~~~~i~~~~--~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~ 228 (559)
+....-.+..-+++..++|-|.-.+-+=|+.+.+..+.. .....+.|.=++.-.+.|. ......+++......+
T Consensus 15 l~~atPLllaaLG~l~sERsGVlNIglEG~M~~gAf~~~~~~~~t~spw~gl~~a~l~g~----l~~ll~a~~ti~l~~n 90 (304)
T COG1079 15 LRAATPLLLAALGGLFSERSGVLNIGLEGIMLLGAFSGALFAYGTGSPWLGLLAAALVGA----LFGLLHAFLTIKLRAN 90 (304)
T ss_pred HHHHHHHHHHHHHHHHHHHhceeeechhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH----HHHHHHHHHHHhhccc
Confidence 333444556667888999988766555554444332221 1224456654444444444 4445566666666667
Q ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcc
Q 008615 229 IRGTLISLKELFIVLGILLGYFVGSFQ 255 (559)
Q Consensus 229 ~r~~~~~~~~~~~~~G~~~g~~l~~~l 255 (559)
+--...++.-.+.++...++..+.+.-
T Consensus 91 qiisG~alnl~a~Glt~fl~~~~~~~~ 117 (304)
T COG1079 91 QIISGLALNLLASGLTAFLGQSIFGQP 117 (304)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhccC
Confidence 766777777777777777777665543
No 372
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=21.26 E-value=1.6e+02 Score=22.62 Aligned_cols=37 Identities=14% Similarity=0.013 Sum_probs=24.9
Q ss_pred HHHHHhcCchhhHHHHHHHHHHHHHHHHhhccCCCCC
Q 008615 512 SPLKELLGAENIFLLFAAIAFLAVLFIVRTVPETKGL 548 (559)
Q Consensus 512 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (559)
|.-.|..+|..+|++...++++.+.+.+.+.|++.-+
T Consensus 51 G~~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~i~ 87 (105)
T PF10183_consen 51 GEKRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTSIQ 87 (105)
T ss_pred CCcchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCCHH
Confidence 4455677788888776666666666666777776543
No 373
>PRK11875 psbT photosystem II reaction center protein T; Reviewed
Probab=21.20 E-value=1.4e+02 Score=16.76 Aligned_cols=11 Identities=9% Similarity=0.169 Sum_probs=6.7
Q ss_pred HHhhccCCchH
Q 008615 278 IGMWSLPPSPR 288 (559)
Q Consensus 278 ~~~~~~~e~p~ 288 (559)
....++.|+|+
T Consensus 18 FFAIfFRepPr 28 (31)
T PRK11875 18 FFAIAFRDPPK 28 (31)
T ss_pred HHhhhccCCCC
Confidence 33456777775
No 374
>PRK14212 camphor resistance protein CrcB; Provisional
Probab=20.90 E-value=4.4e+02 Score=21.07 Aligned_cols=14 Identities=14% Similarity=0.095 Sum_probs=6.4
Q ss_pred HHHHHHHHHHHHHH
Q 008615 433 VCGIALSLLLLSAY 446 (559)
Q Consensus 433 ~~~~~~~~~~~~~~ 446 (559)
+++-.++++++++.
T Consensus 38 l~vN~~GsfllG~~ 51 (128)
T PRK14212 38 LIVNCLGCFVLGFL 51 (128)
T ss_pred HHHHHHHHHHHHHH
Confidence 33444454544443
No 375
>PRK14199 camphor resistance protein CrcB; Provisional
Probab=20.66 E-value=4.5e+02 Score=21.04 Aligned_cols=13 Identities=15% Similarity=0.097 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHH
Q 008615 433 VCGIALSLLLLSA 445 (559)
Q Consensus 433 ~~~~~~~~~~~~~ 445 (559)
+++-.++++++++
T Consensus 41 l~VNi~GsfllG~ 53 (128)
T PRK14199 41 LIVNIVGALLIGF 53 (128)
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444443
No 376
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=20.54 E-value=5.9e+02 Score=22.35 Aligned_cols=62 Identities=15% Similarity=0.156 Sum_probs=29.8
Q ss_pred eeecccCCccchhhHHHHHHHHHHHHHHHHHHhhHHHHHhcCch-hhHHHHHHHHHHHHHHHHh
Q 008615 478 LMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKELLGAE-NIFLLFAAIAFLAVLFIVR 540 (559)
Q Consensus 478 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~ 540 (559)
.+..+. +++.|-+..--......+...+.......+.+.+|.. ..|-+.|++.+....+-..
T Consensus 26 ~lt~~~-~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ml 88 (203)
T PF01914_consen 26 SLTKGM-SPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALEML 88 (203)
T ss_pred HHhCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 333444 4344433333333333333344455556667777844 4566666665554444333
No 377
>PF01528 Herpes_glycop: Herpesvirus glycoprotein M; InterPro: IPR000785 The Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) protein belongs to a family of sequences that groups together Human herpesvirus 1 (HHV-1) UL10, EHV-1 52, Human herpesvirus 3 (HHV-3) 50, Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4) BBRF3, Human herpesvirus 1 (HHV-1) 39 and Human cytomegalovirus (HHV-5) UL100. Little is yet known about the properties of the protein. However, its amino acid sequence is highly hydrophobic, containing 8 putative membrane-spanning regions, and it is therefore believed to be either membrane-associated or transmembrane.; GO: 0016020 membrane
Probab=20.36 E-value=3.5e+02 Score=26.42 Aligned_cols=50 Identities=10% Similarity=-0.023 Sum_probs=23.3
Q ss_pred HHhchhHhHHHHHHHHHHhhhhhhhhhhhhhhhccCCc----ccchhhhhHHHH
Q 008615 190 TAYAPGLGVLLVGRLLYGLGIGLAMHGAPLYIAETCPS----QIRGTLISLKEL 239 (559)
Q Consensus 190 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~----~~r~~~~~~~~~ 239 (559)
+++++|+.....--++..+..=...+...-++.|.+=. .+-|...|.+.+
T Consensus 228 m~~gNsF~v~~~~~v~~ai~~F~vl~ii~~i~~E~~L~~Yv~v~~G~~~G~lia 281 (374)
T PF01528_consen 228 MAIGNSFYVSVSDMVFGAINVFAVLSIIYLIVIEVVLARYVKVQFGPHLGTLIA 281 (374)
T ss_pred HHHhcceeeeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHH
Confidence 34456665444444444444434444555555555433 334444444433
Done!