Query 008623
Match_columns 559
No_of_seqs 194 out of 2315
Neff 8.3
Searched_HMMs 46136
Date Thu Mar 28 14:30:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008623.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008623hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 7.7E-47 1.7E-51 410.6 39.0 529 15-556 19-570 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.9E-39 4.2E-44 336.6 25.5 423 25-516 16-452 (498)
3 PRK15462 dipeptide/tripeptide 100.0 1.8E-34 3.9E-39 309.5 35.3 424 27-518 6-438 (493)
4 PRK10207 dipeptide/tripeptide 100.0 3.3E-34 7E-39 311.0 36.9 420 26-518 10-439 (489)
5 TIGR00924 yjdL_sub1_fam amino 100.0 9E-34 1.9E-38 307.1 35.9 423 26-519 6-442 (475)
6 PRK09584 tppB putative tripept 100.0 2.7E-32 5.8E-37 297.3 36.1 415 26-517 17-441 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 99.9 3.5E-26 7.5E-31 253.5 26.3 337 45-442 2-345 (654)
8 PRK03545 putative arabinose tr 99.9 2.7E-23 5.9E-28 219.5 25.4 173 29-232 8-180 (390)
9 TIGR00900 2A0121 H+ Antiporter 99.9 2.6E-23 5.5E-28 215.7 24.2 360 33-520 2-363 (365)
10 PRK05122 major facilitator sup 99.9 1.8E-22 3.9E-27 213.6 30.8 351 28-520 13-364 (399)
11 PRK12382 putative transporter; 99.9 1.4E-22 3.1E-27 214.0 29.8 351 28-520 13-364 (392)
12 PRK10054 putative transporter; 99.9 6.3E-23 1.4E-27 217.4 26.2 356 28-522 5-361 (395)
13 PRK11646 multidrug resistance 99.9 8E-23 1.7E-27 217.0 26.8 349 33-522 13-361 (400)
14 PRK14995 methyl viologen resis 99.9 1.4E-22 3E-27 221.2 25.7 401 29-520 5-413 (495)
15 PRK10489 enterobactin exporter 99.9 3.5E-22 7.6E-27 213.0 24.4 356 32-521 19-375 (417)
16 PRK10504 putative transporter; 99.9 8.7E-22 1.9E-26 213.2 27.4 177 29-236 9-185 (471)
17 PF07690 MFS_1: Major Facilita 99.9 1E-22 2.2E-27 210.4 18.2 166 36-231 2-167 (352)
18 PRK11551 putative 3-hydroxyphe 99.9 1E-21 2.2E-26 208.2 26.3 175 26-231 11-185 (406)
19 PRK10213 nepI ribonucleoside t 99.9 1.9E-21 4.2E-26 206.0 26.4 174 25-229 15-188 (394)
20 TIGR00711 efflux_EmrB drug res 99.9 1.3E-21 2.9E-26 212.1 25.7 399 32-519 4-409 (485)
21 TIGR00891 2A0112 putative sial 99.9 2.4E-21 5.3E-26 204.2 26.9 173 26-229 8-182 (405)
22 PRK09874 drug efflux system pr 99.9 7E-22 1.5E-26 209.3 22.8 174 29-234 13-191 (408)
23 TIGR02332 HpaX 4-hydroxyphenyl 99.9 3.1E-21 6.6E-26 205.7 26.6 178 28-236 6-189 (412)
24 TIGR00895 2A0115 benzoate tran 99.9 4.7E-21 1E-25 201.1 27.7 172 28-230 15-186 (398)
25 PF00854 PTR2: POT family; In 99.9 3.4E-23 7.4E-28 217.7 11.3 366 97-503 1-369 (372)
26 TIGR01299 synapt_SV2 synaptic 99.9 2.4E-21 5.3E-26 217.5 26.8 155 51-235 187-354 (742)
27 COG2814 AraJ Arabinose efflux 99.9 9.4E-21 2E-25 195.5 28.4 180 27-237 10-189 (394)
28 TIGR00893 2A0114 d-galactonate 99.9 1.6E-21 3.5E-26 203.6 22.8 153 53-235 16-168 (399)
29 TIGR00899 2A0120 sugar efflux 99.9 8.4E-21 1.8E-25 198.4 28.0 169 36-234 3-174 (375)
30 TIGR00890 2A0111 Oxalate/Forma 99.9 1.5E-21 3.2E-26 203.2 22.2 157 46-234 19-175 (377)
31 PRK11663 regulatory protein Uh 99.9 2.6E-21 5.7E-26 207.6 24.0 166 32-228 25-190 (434)
32 TIGR00887 2A0109 phosphate:H+ 99.9 6.4E-21 1.4E-25 208.4 27.5 182 29-234 15-223 (502)
33 TIGR00879 SP MFS transporter, 99.9 2.1E-21 4.4E-26 208.5 21.0 145 64-235 69-216 (481)
34 PRK10091 MFS transport protein 99.9 9.9E-21 2.2E-25 199.5 25.1 172 30-232 3-174 (382)
35 TIGR00881 2A0104 phosphoglycer 99.9 5.6E-21 1.2E-25 199.0 22.9 152 53-234 17-169 (379)
36 TIGR00903 2A0129 major facilit 99.9 6.8E-21 1.5E-25 199.8 22.8 161 42-234 3-163 (368)
37 TIGR00710 efflux_Bcr_CflA drug 99.9 1.4E-20 3E-25 197.4 25.1 176 28-234 3-178 (385)
38 PRK10077 xylE D-xylose transpo 99.9 1.2E-20 2.7E-25 204.4 25.0 154 62-234 51-213 (479)
39 PRK09556 uhpT sugar phosphate 99.9 3.3E-21 7.2E-26 208.7 20.4 152 54-230 52-206 (467)
40 cd06174 MFS The Major Facilita 99.9 2.9E-20 6.3E-25 191.2 26.5 323 33-519 2-326 (352)
41 PRK09705 cynX putative cyanate 99.9 3.6E-20 7.8E-25 196.2 26.9 160 37-228 16-176 (393)
42 PRK15402 multidrug efflux syst 99.9 2.2E-20 4.9E-25 198.3 24.9 159 45-234 28-186 (406)
43 TIGR00897 2A0118 polyol permea 99.9 4E-20 8.6E-25 196.4 26.7 170 26-222 9-179 (402)
44 PRK03633 putative MFS family t 99.9 4.8E-20 1E-24 194.2 26.9 156 29-215 5-160 (381)
45 PRK12307 putative sialic acid 99.9 2.1E-20 4.5E-25 199.6 23.9 165 28-223 16-180 (426)
46 TIGR00892 2A0113 monocarboxyla 99.9 6.5E-21 1.4E-25 205.8 20.2 149 56-235 44-193 (455)
47 PRK03699 putative transporter; 99.9 1E-19 2.3E-24 192.6 27.5 173 28-231 5-178 (394)
48 PRK11273 glpT sn-glycerol-3-ph 99.9 3.8E-20 8.3E-25 199.6 24.4 171 35-232 30-204 (452)
49 PRK10406 alpha-ketoglutarate t 99.9 1.5E-19 3.3E-24 193.7 28.5 169 37-228 29-211 (432)
50 PRK15011 sugar efflux transpor 99.9 1.6E-19 3.4E-24 191.2 27.8 174 32-236 17-194 (393)
51 PRK11195 lysophospholipid tran 99.9 2E-19 4.3E-24 190.5 27.3 164 30-228 3-166 (393)
52 PRK03893 putative sialic acid 99.9 5.3E-20 1.1E-24 200.5 23.2 168 27-225 17-184 (496)
53 PRK11652 emrD multidrug resist 99.8 9.1E-20 2E-24 192.8 23.4 173 27-230 5-177 (394)
54 TIGR00902 2A0127 phenyl propri 99.8 6E-19 1.3E-23 186.1 28.1 344 33-521 7-356 (382)
55 PRK09952 shikimate transporter 99.8 3.8E-19 8.3E-24 191.1 26.8 176 28-226 20-210 (438)
56 TIGR00886 2A0108 nitrite extru 99.8 6.7E-20 1.5E-24 191.1 20.2 159 31-220 2-171 (366)
57 TIGR00894 2A0114euk Na(+)-depe 99.8 8.5E-20 1.9E-24 197.5 21.7 147 60-234 70-217 (465)
58 PRK11043 putative transporter; 99.8 2.6E-19 5.6E-24 189.7 24.5 163 42-234 15-179 (401)
59 PRK15034 nitrate/nitrite trans 99.8 2E-19 4.3E-24 191.6 23.4 180 30-235 34-231 (462)
60 KOG2532 Permease of the major 99.8 4.5E-20 9.8E-25 197.6 17.8 348 59-519 66-418 (466)
61 PRK10642 proline/glycine betai 99.8 5.7E-19 1.2E-23 192.5 26.4 176 29-227 15-204 (490)
62 PRK15403 multidrug efflux syst 99.8 1.1E-18 2.3E-23 186.2 27.5 162 42-234 28-189 (413)
63 PRK09528 lacY galactoside perm 99.8 2.3E-19 5E-24 191.5 21.6 368 30-521 10-379 (420)
64 TIGR00882 2A0105 oligosacchari 99.8 4.8E-19 1E-23 187.5 23.7 180 30-234 2-181 (396)
65 TIGR00898 2A0119 cation transp 99.8 4.5E-19 9.7E-24 193.8 23.9 147 56-235 114-263 (505)
66 TIGR00792 gph sugar (Glycoside 99.8 1.1E-18 2.3E-23 186.9 24.5 358 38-522 7-382 (437)
67 KOG1330 Sugar transporter/spin 99.8 7.9E-20 1.7E-24 188.2 14.8 179 28-237 31-210 (493)
68 PLN00028 nitrate transmembrane 99.8 4.9E-19 1.1E-23 192.2 21.3 174 29-234 35-217 (476)
69 PRK11102 bicyclomycin/multidru 99.8 1.3E-18 2.8E-23 182.5 23.4 158 45-233 6-163 (377)
70 PRK11128 putative 3-phenylprop 99.8 4.1E-18 8.8E-23 179.7 26.2 339 39-521 13-356 (382)
71 PF05977 MFS_3: Transmembrane 99.8 1.7E-18 3.8E-23 188.3 23.9 361 31-522 11-371 (524)
72 PRK15075 citrate-proton sympor 99.8 7.2E-18 1.6E-22 180.9 28.4 171 30-223 15-199 (434)
73 KOG0569 Permease of the major 99.8 1.7E-18 3.7E-23 183.9 22.4 382 68-557 62-460 (485)
74 TIGR00896 CynX cyanate transpo 99.8 2.8E-18 6.1E-23 178.8 23.4 145 49-226 19-165 (355)
75 PRK10133 L-fucose transporter; 99.8 3.9E-18 8.4E-23 183.2 24.8 150 32-209 28-177 (438)
76 PRK08633 2-acyl-glycerophospho 99.8 2.1E-18 4.6E-23 206.5 24.2 155 30-211 9-165 (1146)
77 PRK06814 acylglycerophosphoeth 99.8 1.6E-18 3.5E-23 207.4 23.1 338 66-519 52-395 (1140)
78 TIGR00712 glpT glycerol-3-phos 99.8 8.5E-19 1.8E-23 188.3 18.4 155 54-235 50-205 (438)
79 PRK10473 multidrug efflux syst 99.8 1.4E-17 3.1E-22 175.8 25.7 166 36-232 9-174 (392)
80 TIGR00889 2A0110 nucleoside tr 99.8 3.8E-17 8.1E-22 174.6 28.7 354 35-522 7-373 (418)
81 COG2271 UhpC Sugar phosphate p 99.8 3.2E-18 6.9E-23 174.9 18.4 172 33-234 28-204 (448)
82 KOG0254 Predicted transporter 99.8 2.9E-17 6.2E-22 180.1 26.5 360 67-518 90-455 (513)
83 TIGR00883 2A0106 metabolite-pr 99.8 1.1E-17 2.3E-22 175.2 22.1 155 53-229 15-184 (394)
84 TIGR00901 2A0125 AmpG-related 99.8 2E-17 4.4E-22 172.3 23.4 155 51-234 9-176 (356)
85 TIGR00885 fucP L-fucose:H+ sym 99.8 3.6E-17 7.8E-22 174.2 25.5 170 32-229 5-200 (410)
86 COG2223 NarK Nitrate/nitrite t 99.8 1.2E-17 2.6E-22 170.9 20.4 375 26-547 10-387 (417)
87 PRK11010 ampG muropeptide tran 99.7 2.9E-16 6.3E-21 171.1 26.7 178 28-234 10-193 (491)
88 TIGR01301 GPH_sucrose GPH fami 99.7 5.9E-16 1.3E-20 166.1 27.6 414 32-522 6-446 (477)
89 PRK11902 ampG muropeptide tran 99.7 2.8E-15 6.1E-20 159.2 29.4 164 38-230 7-176 (402)
90 KOG2615 Permease of the major 99.7 7.9E-16 1.7E-20 154.8 21.9 116 64-210 66-181 (451)
91 PF00083 Sugar_tr: Sugar (and 99.7 4.7E-20 1E-24 198.4 -11.5 359 67-519 47-410 (451)
92 PRK09669 putative symporter Ya 99.7 1.5E-15 3.3E-20 163.4 22.8 175 37-234 16-202 (444)
93 TIGR02718 sider_RhtX_FptX side 99.7 6.5E-15 1.4E-19 155.6 26.5 177 32-235 3-183 (390)
94 PRK10429 melibiose:sodium symp 99.7 4.4E-15 9.5E-20 161.2 25.5 366 37-524 13-397 (473)
95 KOG3764 Vesicular amine transp 99.7 5.7E-16 1.2E-20 156.7 16.3 149 60-237 100-248 (464)
96 PF13347 MFS_2: MFS/sugar tran 99.7 8.9E-16 1.9E-20 164.5 19.0 363 39-527 10-391 (428)
97 TIGR00805 oat sodium-independe 99.7 5.9E-16 1.3E-20 173.1 16.9 202 29-237 31-282 (633)
98 PRK09848 glucuronide transport 99.7 1.5E-14 3.2E-19 155.9 24.3 359 37-524 15-392 (448)
99 PF06609 TRI12: Fungal trichot 99.7 1.7E-14 3.7E-19 157.2 24.4 149 52-232 65-213 (599)
100 PF03825 Nuc_H_symport: Nucleo 99.6 9.2E-14 2E-18 147.0 27.8 350 39-522 11-366 (400)
101 TIGR00806 rfc RFC reduced fola 99.6 5E-14 1.1E-18 148.2 22.5 155 50-236 45-203 (511)
102 KOG0255 Synaptic vesicle trans 99.6 2.1E-14 4.5E-19 157.9 20.7 140 59-231 111-250 (521)
103 KOG2504 Monocarboxylate transp 99.6 1E-13 2.3E-18 150.4 23.9 399 33-522 45-452 (509)
104 TIGR00788 fbt folate/biopterin 99.6 1.5E-13 3.3E-18 148.9 24.1 378 31-522 27-415 (468)
105 PRK11462 putative transporter; 99.6 2.3E-13 4.9E-18 147.2 25.2 176 37-234 16-202 (460)
106 COG2807 CynX Cyanate permease 99.6 6.8E-13 1.5E-17 133.5 23.3 343 35-522 17-361 (395)
107 COG0738 FucP Fucose permease [ 99.5 9.1E-13 2E-17 134.5 23.0 150 34-210 16-165 (422)
108 KOG0252 Inorganic phosphate tr 99.5 9.2E-14 2E-18 143.1 15.5 117 63-202 81-197 (538)
109 PF01306 LacY_symp: LacY proto 99.5 3.9E-13 8.3E-18 140.6 20.1 365 31-522 8-377 (412)
110 KOG0253 Synaptic vesicle trans 99.5 4E-12 8.7E-17 127.5 22.5 182 39-252 86-267 (528)
111 PRK15011 sugar efflux transpor 99.5 6.8E-13 1.5E-17 140.5 17.3 178 27-235 213-390 (393)
112 PRK10642 proline/glycine betai 99.5 2.5E-13 5.5E-18 148.1 13.9 181 28-235 248-429 (490)
113 COG2271 UhpC Sugar phosphate p 99.5 1.8E-13 3.9E-18 140.3 11.3 180 29-235 251-433 (448)
114 PF11700 ATG22: Vacuole efflux 99.5 2.2E-11 4.9E-16 131.4 27.9 66 457-522 379-444 (477)
115 COG2211 MelB Na+/melibiose sym 99.5 9E-12 2E-16 131.7 23.3 360 35-522 17-398 (467)
116 PTZ00207 hypothetical protein; 99.4 6.4E-11 1.4E-15 130.0 29.5 153 47-228 44-197 (591)
117 PRK09556 uhpT sugar phosphate 99.4 1.1E-12 2.3E-17 142.3 14.2 177 30-234 258-447 (467)
118 TIGR00883 2A0106 metabolite-pr 99.4 1.2E-12 2.6E-17 136.9 13.0 166 31-223 220-388 (394)
119 TIGR00890 2A0111 Oxalate/Forma 99.4 2.1E-12 4.6E-17 134.2 14.5 170 30-228 205-374 (377)
120 PRK09952 shikimate transporter 99.4 2.5E-12 5.5E-17 138.2 15.3 183 27-235 247-432 (438)
121 KOG2533 Permease of the major 99.4 3.8E-11 8.2E-16 129.5 24.2 150 58-237 73-228 (495)
122 PRK03699 putative transporter; 99.4 3.8E-12 8.1E-17 134.8 14.7 170 30-230 205-374 (394)
123 KOG4686 Predicted sugar transp 99.4 3.6E-13 7.9E-18 130.3 6.0 157 31-213 42-200 (459)
124 TIGR00899 2A0120 sugar efflux 99.4 7.2E-12 1.6E-16 130.9 15.5 172 32-234 201-372 (375)
125 cd06174 MFS The Major Facilita 99.4 1.2E-11 2.6E-16 127.0 15.8 172 31-232 176-348 (352)
126 PRK05122 major facilitator sup 99.4 7.1E-12 1.5E-16 132.7 14.4 167 39-238 225-391 (399)
127 TIGR00889 2A0110 nucleoside tr 99.4 5E-12 1.1E-16 135.1 13.3 179 32-237 210-403 (418)
128 PRK11551 putative 3-hydroxyphe 99.4 9.1E-12 2E-16 132.1 14.6 171 33-234 223-394 (406)
129 PRK09705 cynX putative cyanate 99.3 2.4E-11 5.2E-16 128.7 17.4 178 31-239 206-384 (393)
130 PRK09874 drug efflux system pr 99.3 9.2E-12 2E-16 131.8 14.2 168 39-236 228-398 (408)
131 PRK09528 lacY galactoside perm 99.3 8.8E-12 1.9E-16 133.1 13.9 172 32-233 225-400 (420)
132 TIGR00902 2A0127 phenyl propri 99.3 1.7E-11 3.7E-16 129.3 15.0 169 30-231 205-374 (382)
133 TIGR00893 2A0114 d-galactonate 99.3 2.3E-11 5.1E-16 126.8 15.5 179 30-232 215-395 (399)
134 PRK11663 regulatory protein Uh 99.3 1.9E-11 4.1E-16 131.2 13.9 181 30-237 243-425 (434)
135 TIGR00897 2A0118 polyol permea 99.3 2.6E-11 5.7E-16 128.8 14.5 177 30-234 222-399 (402)
136 TIGR01299 synapt_SV2 synaptic 99.3 2.2E-11 4.7E-16 137.5 13.8 134 71-235 600-733 (742)
137 PRK10489 enterobactin exporter 99.3 1.5E-11 3.2E-16 131.1 11.4 157 46-232 239-395 (417)
138 PRK03545 putative arabinose tr 99.3 8.6E-11 1.9E-15 124.1 17.0 174 32-236 207-380 (390)
139 PRK11273 glpT sn-glycerol-3-ph 99.3 1.4E-11 3.1E-16 133.0 11.1 176 30-233 253-432 (452)
140 PRK15075 citrate-proton sympor 99.3 3.2E-11 7E-16 129.4 13.6 153 36-215 244-398 (434)
141 PRK03633 putative MFS family t 99.3 7.8E-11 1.7E-15 124.1 16.1 159 41-233 211-369 (381)
142 COG2223 NarK Nitrate/nitrite t 99.3 4.6E-11 1E-15 122.9 13.7 185 30-238 218-403 (417)
143 COG2270 Permeases of the major 99.3 4.1E-10 9E-15 116.0 20.3 128 50-204 35-170 (438)
144 PF03209 PUCC: PUCC protein; 99.3 1E-09 2.2E-14 113.3 23.1 343 56-522 5-365 (403)
145 PRK10406 alpha-ketoglutarate t 99.3 5.7E-11 1.2E-15 127.4 14.6 177 32-235 244-423 (432)
146 PRK12382 putative transporter; 99.3 4.2E-11 9.2E-16 126.5 13.3 163 40-235 226-388 (392)
147 TIGR00880 2_A_01_02 Multidrug 99.3 1.1E-11 2.4E-16 109.6 7.3 132 73-234 5-136 (141)
148 PRK03893 putative sialic acid 99.3 1E-10 2.2E-15 127.4 16.3 148 48-223 293-440 (496)
149 TIGR00712 glpT glycerol-3-phos 99.2 5.3E-11 1.1E-15 128.0 12.8 182 30-236 251-433 (438)
150 TIGR00891 2A0112 putative sial 99.2 9E-11 2E-15 123.6 13.3 157 35-220 243-400 (405)
151 KOG4686 Predicted sugar transp 99.2 1.3E-10 2.9E-15 112.8 12.8 180 24-235 258-442 (459)
152 PRK11010 ampG muropeptide tran 99.2 1.1E-10 2.4E-15 127.4 13.9 179 32-236 224-403 (491)
153 COG2814 AraJ Arabinose efflux 99.2 2.7E-10 5.9E-15 118.2 15.8 178 30-238 211-388 (394)
154 KOG2325 Predicted transporter/ 99.2 2.3E-11 5E-16 128.9 7.1 193 20-238 24-231 (488)
155 TIGR00881 2A0104 phosphoglycer 99.2 6.9E-11 1.5E-15 122.9 10.4 162 30-218 216-379 (379)
156 TIGR00879 SP MFS transporter, 99.2 3.9E-10 8.5E-15 121.0 16.0 169 46-237 300-471 (481)
157 TIGR00892 2A0113 monocarboxyla 99.2 2.3E-10 5E-15 123.7 13.5 171 30-230 241-415 (455)
158 PLN00028 nitrate transmembrane 99.2 6.5E-10 1.4E-14 120.9 17.1 173 32-236 254-433 (476)
159 PRK10504 putative transporter; 99.2 3.7E-10 8E-15 122.4 14.9 158 30-214 261-418 (471)
160 TIGR01272 gluP glucose/galacto 99.1 4.2E-10 9.1E-15 115.4 13.8 161 30-223 140-302 (310)
161 PRK11128 putative 3-phenylprop 99.1 6.3E-10 1.4E-14 117.3 14.8 167 30-229 205-372 (382)
162 TIGR01272 gluP glucose/galacto 99.1 8.1E-10 1.8E-14 113.3 15.1 81 141-227 8-104 (310)
163 PRK15402 multidrug efflux syst 99.1 7.7E-10 1.7E-14 117.5 15.4 172 31-228 216-387 (406)
164 PF11700 ATG22: Vacuole efflux 99.1 7.8E-10 1.7E-14 119.5 15.5 185 30-236 281-468 (477)
165 TIGR00894 2A0114euk Na(+)-depe 99.1 1E-09 2.3E-14 118.8 15.2 177 30-234 261-448 (465)
166 TIGR02332 HpaX 4-hydroxyphenyl 99.1 8E-10 1.7E-14 117.9 13.5 164 30-223 242-408 (412)
167 TIGR00882 2A0105 oligosacchari 99.1 1E-09 2.2E-14 116.2 14.0 171 31-231 216-390 (396)
168 KOG2563 Permease of the major 99.1 3.5E-09 7.6E-14 109.7 16.8 153 33-210 44-201 (480)
169 TIGR00792 gph sugar (Glycoside 99.1 3E-10 6.4E-15 121.6 9.5 162 30-215 222-384 (437)
170 PRK10091 MFS transport protein 99.1 1.9E-09 4.2E-14 113.6 14.9 171 32-233 201-373 (382)
171 PRK12307 putative sialic acid 99.1 2.7E-09 5.8E-14 113.9 15.6 148 43-219 244-391 (426)
172 TIGR00900 2A0121 H+ Antiporter 99.1 1.1E-09 2.4E-14 113.3 12.1 155 30-213 210-365 (365)
173 PRK10133 L-fucose transporter; 99.0 2.4E-09 5.3E-14 115.1 14.6 167 31-230 259-427 (438)
174 PRK11902 ampG muropeptide tran 99.0 1.7E-09 3.6E-14 114.9 13.1 176 31-236 210-390 (402)
175 PRK15034 nitrate/nitrite trans 99.0 3.9E-09 8.5E-14 113.0 15.7 186 31-236 253-454 (462)
176 TIGR02718 sider_RhtX_FptX side 99.0 3.1E-09 6.6E-14 112.3 14.8 175 31-230 209-385 (390)
177 PF13347 MFS_2: MFS/sugar tran 99.0 3.8E-09 8.2E-14 113.2 15.5 163 30-215 225-388 (428)
178 KOG2816 Predicted transporter 99.0 2.5E-08 5.5E-13 107.0 21.0 353 51-535 42-402 (463)
179 TIGR00896 CynX cyanate transpo 99.0 3.1E-09 6.8E-14 110.6 13.7 156 30-216 197-354 (355)
180 PRK14995 methyl viologen resis 99.0 2.2E-09 4.7E-14 117.4 13.0 154 30-210 259-412 (495)
181 PF03137 OATP: Organic Anion T 99.0 4.3E-11 9.3E-16 131.1 -0.5 191 44-241 16-255 (539)
182 TIGR00711 efflux_EmrB drug res 99.0 2.3E-09 5E-14 116.3 12.2 156 30-211 255-410 (485)
183 TIGR00710 efflux_Bcr_CflA drug 99.0 4.5E-09 9.7E-14 110.1 14.0 161 31-218 207-368 (385)
184 TIGR00895 2A0115 benzoate tran 99.0 1.7E-09 3.6E-14 113.4 10.5 147 31-208 251-397 (398)
185 PF05977 MFS_3: Transmembrane 99.0 3.1E-09 6.7E-14 116.2 11.8 172 32-233 220-391 (524)
186 PRK10054 putative transporter; 99.0 5.1E-09 1.1E-13 111.1 13.1 173 30-232 206-380 (395)
187 PRK10077 xylE D-xylose transpo 99.0 2.7E-08 5.9E-13 107.8 18.7 163 48-237 289-458 (479)
188 TIGR00887 2A0109 phosphate:H+ 99.0 7.5E-09 1.6E-13 113.3 14.2 168 38-232 296-485 (502)
189 KOG2532 Permease of the major 98.9 1E-08 2.2E-13 110.4 13.6 178 30-235 258-446 (466)
190 PRK11646 multidrug resistance 98.9 1.3E-08 2.9E-13 108.0 14.5 154 48-231 226-383 (400)
191 PF07690 MFS_1: Major Facilita 98.9 1.9E-09 4.1E-14 111.1 7.1 145 31-202 207-352 (352)
192 PRK10213 nepI ribonucleoside t 98.9 3.2E-08 7E-13 104.9 16.5 165 31-226 217-381 (394)
193 TIGR00903 2A0129 major facilit 98.9 3.6E-08 7.8E-13 103.6 15.9 167 30-233 192-362 (368)
194 COG2807 CynX Cyanate permease 98.9 4.4E-08 9.4E-13 99.2 15.5 169 31-229 209-378 (395)
195 COG2270 Permeases of the major 98.9 1.7E-08 3.8E-13 104.1 12.9 175 30-234 252-427 (438)
196 KOG3626 Organic anion transpor 98.9 3.3E-08 7.1E-13 109.3 15.6 204 30-240 96-347 (735)
197 PRK09848 glucuronide transport 98.9 8.4E-09 1.8E-13 111.2 10.8 163 30-214 228-391 (448)
198 PRK08633 2-acyl-glycerophospho 98.9 2.2E-08 4.7E-13 120.5 15.0 164 30-223 232-397 (1146)
199 KOG0253 Synaptic vesicle trans 98.9 4.6E-08 1E-12 98.7 14.6 175 31-237 327-520 (528)
200 PRK11195 lysophospholipid tran 98.9 5.3E-08 1.1E-12 103.2 16.2 160 41-231 216-375 (393)
201 PF03092 BT1: BT1 family; Int 98.8 1.5E-07 3.3E-12 101.0 18.8 161 53-237 12-176 (433)
202 PRK06814 acylglycerophosphoeth 98.8 4E-08 8.6E-13 118.2 14.4 182 30-223 225-409 (1140)
203 PF05631 DUF791: Protein of un 98.8 1.1E-06 2.3E-11 89.8 21.7 153 59-238 62-218 (354)
204 PRK11043 putative transporter; 98.8 2.1E-07 4.6E-12 98.5 17.4 158 32-216 205-362 (401)
205 PRK10473 multidrug efflux syst 98.7 1.8E-07 3.8E-12 98.9 15.3 145 44-223 217-361 (392)
206 PRK11102 bicyclomycin/multidru 98.7 1.4E-07 3E-12 98.9 14.4 148 32-206 196-344 (377)
207 KOG2504 Monocarboxylate transp 98.7 4.8E-08 1E-12 106.4 10.9 176 30-236 298-476 (509)
208 TIGR00898 2A0119 cation transp 98.7 4E-08 8.7E-13 107.4 10.2 132 73-234 362-493 (505)
209 PRK10429 melibiose:sodium symp 98.7 6.4E-08 1.4E-12 105.2 11.7 165 30-214 231-396 (473)
210 TIGR00886 2A0108 nitrite extru 98.7 7.3E-08 1.6E-12 100.3 11.2 141 31-198 226-366 (366)
211 PRK09669 putative symporter Ya 98.7 4.9E-08 1.1E-12 105.2 9.5 162 31-215 230-392 (444)
212 TIGR00901 2A0125 AmpG-related 98.7 9E-08 2E-12 99.6 11.1 144 32-195 211-355 (356)
213 TIGR00885 fucP L-fucose:H+ sym 98.7 1.6E-07 3.4E-12 100.2 13.0 163 31-226 233-402 (410)
214 PF03825 Nuc_H_symport: Nucleo 98.7 3.5E-07 7.6E-12 97.0 15.0 179 32-235 209-394 (400)
215 KOG0569 Permease of the major 98.6 2.9E-07 6.3E-12 98.6 13.1 188 31-241 270-459 (485)
216 PF01306 LacY_symp: LacY proto 98.6 1.4E-07 2.9E-12 99.2 9.9 176 30-235 220-399 (412)
217 COG2211 MelB Na+/melibiose sym 98.6 5.4E-07 1.2E-11 95.7 12.6 164 30-215 236-400 (467)
218 PRK11652 emrD multidrug resist 98.5 2.5E-06 5.5E-11 90.1 16.2 148 40-215 217-364 (394)
219 KOG3098 Uncharacterized conser 98.4 3.3E-05 7.1E-10 82.3 21.8 103 72-205 56-158 (461)
220 KOG3764 Vesicular amine transp 98.4 3.2E-07 6.8E-12 93.9 6.1 176 32-231 272-449 (464)
221 COG0738 FucP Fucose permease [ 98.3 6E-06 1.3E-10 85.1 13.1 157 30-219 236-392 (422)
222 PF06813 Nodulin-like: Nodulin 98.3 2E-05 4.4E-10 77.7 16.0 166 45-236 17-182 (250)
223 PRK11462 putative transporter; 98.3 6.5E-06 1.4E-10 89.2 12.9 160 32-214 230-390 (460)
224 PRK15403 multidrug efflux syst 98.3 1.2E-05 2.6E-10 85.8 14.8 168 30-224 218-385 (413)
225 TIGR00924 yjdL_sub1_fam amino 98.3 5.6E-06 1.2E-10 90.1 11.8 184 33-236 275-468 (475)
226 PF03209 PUCC: PUCC protein; 98.3 8E-06 1.7E-10 84.8 12.0 170 37-232 215-394 (403)
227 KOG4332 Predicted sugar transp 98.2 4.2E-06 9.2E-11 81.2 8.5 158 53-236 59-220 (454)
228 PF01770 Folate_carrier: Reduc 98.2 0.00024 5.3E-09 74.6 21.7 157 50-237 23-183 (412)
229 PF00083 Sugar_tr: Sugar (and 98.2 2.8E-08 6.2E-13 106.9 -8.0 186 31-239 253-439 (451)
230 KOG3762 Predicted transporter 98.2 8.1E-05 1.8E-09 79.3 17.5 114 378-522 410-524 (618)
231 KOG2533 Permease of the major 98.1 4.7E-06 1E-10 90.3 7.9 164 31-222 274-442 (495)
232 COG0477 ProP Permeases of the 98.1 4.3E-05 9.4E-10 75.4 12.7 147 49-224 21-173 (338)
233 PF12832 MFS_1_like: MFS_1 lik 98.1 2.8E-05 6.1E-10 62.1 8.9 68 37-106 7-74 (77)
234 TIGR01301 GPH_sucrose GPH fami 98.0 2.5E-05 5.5E-10 84.4 10.4 206 26-238 254-473 (477)
235 TIGR00880 2_A_01_02 Multidrug 98.0 9.1E-05 2E-09 64.8 12.2 86 414-519 27-112 (141)
236 PRK10207 dipeptide/tripeptide 98.0 4.3E-05 9.3E-10 83.5 11.9 146 42-208 281-438 (489)
237 PF02487 CLN3: CLN3 protein; 98.0 0.004 8.7E-08 65.5 25.5 62 457-518 334-395 (402)
238 PRK09584 tppB putative tripept 98.0 5.1E-05 1.1E-09 83.2 11.5 175 39-234 281-477 (500)
239 TIGR00788 fbt folate/biopterin 97.9 2.2E-05 4.7E-10 85.3 7.9 136 58-213 280-415 (468)
240 KOG3762 Predicted transporter 97.8 2.6E-05 5.7E-10 82.9 6.5 172 33-235 374-546 (618)
241 PF06963 FPN1: Ferroportin1 (F 97.8 0.022 4.7E-07 60.9 27.7 189 30-231 2-195 (432)
242 KOG1330 Sugar transporter/spin 97.7 1.2E-05 2.7E-10 84.0 2.2 111 379-520 73-183 (493)
243 KOG0252 Inorganic phosphate tr 97.7 8.8E-05 1.9E-09 77.7 7.0 180 30-235 304-497 (538)
244 TIGR00769 AAA ADP/ATP carrier 97.6 0.0046 1E-07 66.7 19.5 163 30-209 7-189 (472)
245 KOG0254 Predicted transporter 97.6 0.00091 2E-08 73.6 14.6 148 28-194 292-440 (513)
246 KOG0637 Sucrose transporter an 97.5 0.0003 6.5E-09 73.7 8.7 167 30-208 32-202 (498)
247 KOG3574 Acetyl-CoA transporter 97.3 0.16 3.4E-06 52.6 24.1 63 460-522 371-433 (510)
248 TIGR00805 oat sodium-independe 97.2 0.00051 1.1E-08 77.4 6.9 133 378-521 72-235 (633)
249 TIGR00806 rfc RFC reduced fola 97.1 0.0023 5E-08 68.5 10.1 102 384-517 72-173 (511)
250 PF05978 UNC-93: Ion channel r 97.1 0.0078 1.7E-07 55.0 11.8 106 70-206 41-146 (156)
251 KOG2563 Permease of the major 96.8 0.015 3.3E-07 61.2 12.5 157 30-213 266-423 (480)
252 PRK15462 dipeptide/tripeptide 96.7 0.018 3.9E-07 62.7 12.8 138 50-208 288-437 (493)
253 PF06609 TRI12: Fungal trichot 96.6 0.015 3.2E-07 64.5 11.6 154 27-208 307-464 (599)
254 PTZ00207 hypothetical protein; 96.5 0.0092 2E-07 66.3 9.3 174 31-236 354-552 (591)
255 KOG2615 Permease of the major 96.5 0.013 2.8E-07 60.5 9.4 125 58-211 289-414 (451)
256 KOG2816 Predicted transporter 96.4 0.013 2.8E-07 63.3 9.2 151 28-209 238-390 (463)
257 PF06779 DUF1228: Protein of u 96.3 0.035 7.6E-07 45.0 9.1 70 46-117 8-77 (85)
258 KOG0255 Synaptic vesicle trans 96.2 0.052 1.1E-06 59.7 13.2 106 78-210 362-467 (521)
259 TIGR00926 2A1704 Peptide:H+ sy 95.9 0.022 4.7E-07 64.3 8.0 64 452-515 559-622 (654)
260 PRK03612 spermidine synthase; 95.9 0.21 4.7E-06 54.9 15.6 170 36-231 20-193 (521)
261 KOG3626 Organic anion transpor 95.8 0.15 3.3E-06 57.4 14.0 176 30-211 392-649 (735)
262 PF03137 OATP: Organic Anion T 95.6 0.0033 7.1E-08 69.4 0.0 172 30-212 305-515 (539)
263 COG3202 ATP/ADP translocase [E 95.4 2.8 6.1E-05 45.1 20.9 162 29-211 26-210 (509)
264 PF06963 FPN1: Ferroportin1 (F 94.8 0.55 1.2E-05 50.3 14.1 137 49-206 277-413 (432)
265 PF05978 UNC-93: Ion channel r 94.8 0.34 7.4E-06 44.2 10.7 63 457-519 88-150 (156)
266 KOG3880 Predicted small molecu 94.5 2.9 6.4E-05 42.3 16.9 43 475-517 359-401 (409)
267 PF00854 PTR2: POT family; In 94.1 0.2 4.3E-06 52.6 8.8 93 416-519 2-97 (372)
268 KOG2325 Predicted transporter/ 94.0 0.16 3.4E-06 54.8 7.5 198 27-231 259-470 (488)
269 PF13000 Acatn: Acetyl-coenzym 92.8 15 0.00032 40.0 19.8 62 461-522 408-469 (544)
270 COG3104 PTR2 Dipeptide/tripept 92.7 0.78 1.7E-05 49.4 10.3 143 68-230 326-481 (498)
271 KOG4332 Predicted sugar transp 91.0 1.2 2.7E-05 44.0 8.7 173 33-231 252-426 (454)
272 KOG0637 Sucrose transporter an 89.8 3.1 6.7E-05 44.4 11.0 168 330-515 32-200 (498)
273 PF02487 CLN3: CLN3 protein; 89.4 0.98 2.1E-05 47.8 7.1 61 142-208 334-394 (402)
274 KOG3097 Predicted membrane pro 89.3 4.7 0.0001 41.3 11.3 74 77-175 69-142 (390)
275 KOG3098 Uncharacterized conser 87.1 6.1 0.00013 42.6 11.5 113 75-202 288-405 (461)
276 PF03219 TLC: TLC ATP/ADP tran 86.5 25 0.00055 38.4 16.0 163 29-210 23-205 (491)
277 PF03092 BT1: BT1 family; Int 86.1 0.59 1.3E-05 50.2 3.2 159 59-237 245-414 (433)
278 TIGR00939 2a57 Equilibrative N 85.6 56 0.0012 35.2 27.3 61 457-517 371-431 (437)
279 TIGR00939 2a57 Equilibrative N 85.3 1.8 3.9E-05 46.6 6.4 57 142-204 371-427 (437)
280 PF06813 Nodulin-like: Nodulin 83.6 3 6.5E-05 41.3 6.6 93 412-518 63-155 (250)
281 PF07672 MFS_Mycoplasma: Mycop 80.5 13 0.00027 36.9 9.5 59 182-240 3-66 (267)
282 COG0477 ProP Permeases of the 78.6 21 0.00044 34.4 10.8 63 458-520 94-158 (338)
283 KOG1479 Nucleoside transporter 75.0 1.2E+02 0.0026 32.2 24.3 58 457-514 342-399 (406)
284 KOG2601 Iron transporter [Inor 72.5 1.3E+02 0.0029 31.7 18.3 73 33-106 30-102 (503)
285 PF01733 Nucleoside_tran: Nucl 69.2 1.3 2.7E-05 45.4 -0.7 57 142-204 247-303 (309)
286 TIGR00769 AAA ADP/ATP carrier 68.8 99 0.0021 33.7 13.7 70 153-227 276-345 (472)
287 KOG4830 Predicted sugar transp 60.4 16 0.00035 36.2 5.1 71 27-100 15-94 (412)
288 KOG1237 H+/oligopeptide sympor 58.6 18 0.00039 40.4 5.9 140 413-557 102-256 (571)
289 KOG3810 Micronutrient transpor 53.2 96 0.0021 32.4 9.4 156 50-236 24-183 (433)
290 KOG1479 Nucleoside transporter 51.6 27 0.00058 37.0 5.4 114 46-176 259-376 (406)
291 PF01770 Folate_carrier: Reduc 48.3 1.8E+02 0.0039 31.1 11.0 62 457-519 93-154 (412)
292 COG5336 Uncharacterized protei 48.2 59 0.0013 27.5 5.8 32 75-106 51-82 (116)
293 PF09527 ATPase_gene1: Putativ 41.7 99 0.0021 22.5 5.7 33 74-106 8-40 (55)
294 PF06912 DUF1275: Protein of u 36.9 3.7E+02 0.0079 25.4 11.8 33 191-224 168-200 (209)
295 PF03219 TLC: TLC ATP/ADP tran 32.8 6.9E+02 0.015 27.4 13.4 69 153-226 292-360 (491)
296 PF07672 MFS_Mycoplasma: Mycop 28.1 3E+02 0.0066 27.4 8.2 30 142-171 203-232 (267)
297 PF11947 DUF3464: Protein of u 25.5 1.3E+02 0.0029 27.2 4.8 48 144-200 98-145 (153)
298 PF13000 Acatn: Acetyl-coenzym 25.1 3.6E+02 0.0078 29.7 8.7 62 146-213 408-469 (544)
299 PF11947 DUF3464: Protein of u 21.9 2E+02 0.0043 26.1 5.2 47 460-509 99-145 (153)
300 PRK03612 spermidine synthase; 20.7 4.8E+02 0.01 28.8 9.1 53 466-519 118-170 (521)
301 TIGR02230 ATPase_gene1 F0F1-AT 20.6 3.1E+02 0.0067 23.0 5.7 26 78-103 54-79 (100)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-47 Score=410.60 Aligned_cols=529 Identities=52% Similarity=0.891 Sum_probs=457.9
Q ss_pred cCCCCCCCcc---cCCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhH
Q 008623 15 DYKGNPADKT---KTGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLAD 91 (559)
Q Consensus 15 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD 91 (559)
++++.+..+. +++.|+++..++..+.++++++|++...+..|+.+.+|.+...+.-.+..+.......++++++++|
T Consensus 19 d~~~~~~~~~~~~~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD 98 (571)
T KOG1237|consen 19 DYRGPLLGSSIAFKTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLAD 98 (571)
T ss_pred eccCCcccccccceechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 4444444443 6678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhhhhccCCCCC-CCCCCCCCcccc-cCcchhHHHHHHHHHHHHhccCCCcccccccc
Q 008623 92 AYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKP-VCHGPRGEETCQ-VTDAQSATFFVALYLIALGTGGIKPCVSSYGA 169 (559)
Q Consensus 92 r~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 169 (559)
.|+||.+++.++.++..++.+++.+...+|...+ .|-...+.+.|+ ........++.++.++++|.|+..|+..++.+
T Consensus 99 ~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGa 178 (571)
T KOG1237|consen 99 SFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGA 178 (571)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcc
Confidence 9999999999999999999999988888887665 342222333455 45556778889999999999999999999999
Q ss_pred cCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChh
Q 008623 170 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPL 249 (559)
Q Consensus 170 ~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 249 (559)
|++++..+.++.++.+.++|+++..++|..++..+..++.+..||.+.|.++.+.+++++++++...+.+++++|.+++.
T Consensus 179 dQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~ 258 (571)
T KOG1237|consen 179 DQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPK 258 (571)
T ss_pred cccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCch
Confidence 99997777777788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhcccccc-ccCCCccccchhhHHH
Q 008623 250 TRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIK-ESVNPWRLCTVTQVEE 328 (559)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~v~~ 328 (559)
..+.+++..+.+++....+.++..+ ++......+..+.+.++++|.+++..+.+.+. ...++|+.|..++||+
T Consensus 259 t~i~~Vlvaa~~k~~~~~~~~~~~~------~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee 332 (571)
T KOG1237|consen 259 TRIGQVLVAAAFKRKAVVSLDPEEL------YYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEE 332 (571)
T ss_pred hHHHHHHHHHHHHHhccCCCcchhc------cccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhh
Confidence 9999999999999887776654333 11111112223345667778877655543211 1456899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCcc-ceeCccccccccceeeehhhhhhhhhhhhhhhhccC
Q 008623 329 LKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSS-FKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTG 407 (559)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~ 407 (559)
.|.++++++++.....++.++.|+.+.++.|+..|+++.+ . ++++++.++.+..+..++..|++++..+|+.+|..+
T Consensus 333 ~K~~lr~~Pi~~~~i~~~~~~aq~~t~~v~Q~~~mdr~~~--~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~ 410 (571)
T KOG1237|consen 333 VKAVLRLLPIWLTTIIYSTVYAQMVTFFVLQATTMDRHLG--SNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTG 410 (571)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHhhhhheehhhhhcCCCCC--CCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcC
Confidence 9999999999999999999999999999999999999988 5 999999999999999999999999999999999998
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcC
Q 008623 408 HKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQA 487 (559)
Q Consensus 408 ~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~ 487 (559)
++.+++..+++++|+++..+++...+..+..|.+++.+ ...+.++++.+|++++|++.|++|.+..++..++.++++
T Consensus 411 ~~~~~t~lqrig~G~~~si~sm~~aa~vE~krl~~~~~---~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qa 487 (571)
T KOG1237|consen 411 NPFGITPLQRIGIGLVLSILSMAVAGIVEAKRLKTAVS---LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQA 487 (571)
T ss_pred CCCCCChhheeeccchHHHHHHHHHHHHHHHHhhhhhh---ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhC
Confidence 77779999999999999999999999999999888775 122345799999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhccCCCCCCCC-CCCCCchhhHHhhhhh---------------heee
Q 008623 488 PDAMRSLCSALSLTTVALGNYLSSLLVTIVTSISTKNGNLGWIP-DNLNRGHLHYFFWLLT---------------WYTY 551 (559)
Q Consensus 488 P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~-~~~~~~~~~~~f~~~~---------------~~~~ 551 (559)
|++||+.+++++..+.++|+.++++++..+...+.. ..+|++ +++|++|+.+++|+++ ||+|
T Consensus 488 P~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~ 565 (571)
T KOG1237|consen 488 PESMKSVATALWLLTVAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDY 565 (571)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeee
Confidence 999999999999999999999999999998765533 458999 9999999999999998 7888
Q ss_pred eCCCC
Q 008623 552 KRPVG 556 (559)
Q Consensus 552 ~~~~~ 556 (559)
++.+.
T Consensus 566 ~~~~~ 570 (571)
T KOG1237|consen 566 KDDKD 570 (571)
T ss_pred ccccC
Confidence 77554
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=336.65 Aligned_cols=423 Identities=27% Similarity=0.412 Sum_probs=333.4
Q ss_pred cCCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcC----CChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHH
Q 008623 25 KTGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLD----QSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTI 100 (559)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg----~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~ 100 (559)
..+++|.++.++.++++|+++||++...+..|+..+++ ++++++..+.+.|....++.+.++||++||++|+||++
T Consensus 16 ~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI 95 (498)
T COG3104 16 FFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTI 95 (498)
T ss_pred cCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 34688999999999999999999999999999999988 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhh
Q 008623 101 AIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEK 180 (559)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 180 (559)
+.+.+++++|.+.++... ......++++++++++|.|++.|++.++++|++|++++
T Consensus 96 ~lGail~~iGh~~L~~~~---------------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dp--- 151 (498)
T COG3104 96 VLGAILMAIGHLVLAISS---------------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDP--- 151 (498)
T ss_pred HHHHHHHHHHHHHHhccc---------------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCc---
Confidence 999999999999997651 02356789999999999999999999999999999884
Q ss_pred hccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccC--CCCChhH------HH
Q 008623 181 KHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQK--PGGSPLT------RI 252 (559)
Q Consensus 181 ~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~------~~ 252 (559)
||..+++++|++.|+|+.++|++.+++.+.+||+..|.++++.+.++++.+++.+|+..... ++..+.+ ..
T Consensus 152 -rrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 230 (498)
T COG3104 152 -RRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVL 230 (498)
T ss_pred -ccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhH
Confidence 58889999999999999999999999999999999999999999999999998887765543 1111111 11
Q ss_pred HHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhh-hhhhhccccccccCCCccccchhhHHHHHH
Q 008623 253 CQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDK-AAVEIQSDNIKESVNPWRLCTVTQVEELKA 331 (559)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 331 (559)
.+++......- ++..-.. +.++.... ..+........ +...+ ++.. +++||
T Consensus 231 ~~~~~~~~~~~----------~~~~l~~-------------~~~~~~~~~~~i~~~~~~~~-~~~~~---~~~~-~er~r 282 (498)
T COG3104 231 GGLVVMILAAL----------LTLLLNQ-------------NTFSGVLLVISILIAIIYFA-EAFRS---PKVF-DERRR 282 (498)
T ss_pred HHHHHHHHHHH----------HHHHHHH-------------HHHHHHHHHHHHHHHHHHHH-HHhcc---CccH-HHHHH
Confidence 11111111110 0000000 00000000 00000000000 00011 1223 67888
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhhhcc-ccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCC
Q 008623 332 IVRLLPIWATGIIFSAVYSQMSSLFVLQG-ERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKN 410 (559)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~ 410 (559)
.+..+++++...+||++++|+++.+..+. ++.+++.. |+++++++++++|++.++++.|+.+++++|+.++. |+
T Consensus 283 ~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~--g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~--~~- 357 (498)
T COG3104 283 LLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF--GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN--KQ- 357 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc--ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC--CC-
Confidence 99999999999999999999999876555 45566633 58899999999999999999999999998877663 32
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChh
Q 008623 411 GLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDA 490 (559)
Q Consensus 411 ~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~ 490 (559)
++.+.|+++|++++..+++.+....... .++....|.+|++..|++.++||.+++|...+++++.+|+.
T Consensus 358 -ps~~~KFalGl~l~g~~fl~l~~~~~~~----------~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~ 426 (498)
T COG3104 358 -PSTPIKFALGLILAGLGFLILLLAGIWF----------GGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPA 426 (498)
T ss_pred -CCcchHHHHHHHHHHHHHHHHHHHHHhh----------cCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHH
Confidence 8899999999999999999888763321 11134588999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHH
Q 008623 491 MRSLCSALSLTTVALGNYLSSLLVTI 516 (559)
Q Consensus 491 ~rg~~~g~~~~~~~lg~~lg~~l~~~ 516 (559)
+.+..+|+|.+++..|+.++..+.+.
T Consensus 427 ~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 427 LKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhceeccc
Confidence 99999999999999998887777763
No 3
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=1.8e-34 Score=309.54 Aligned_cols=424 Identities=18% Similarity=0.251 Sum_probs=308.5
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
+|+|.++.+++.+++++.++|++..++|.|+++++|++..+++.+.+.+....+++++++|+++||++||||+++++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 47888999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
.+++.+.+.... .+...++++..+..+|.|...++.+++++|++|+++ ++|.++
T Consensus 86 ~~lg~lll~~~~----------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~----~~R~sg 139 (493)
T PRK15462 86 MAIGHVVLGASE----------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTD----PRRDGG 139 (493)
T ss_pred HHHHHHHHHHhh----------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCC----ccccce
Confidence 888877664320 112234555666778888888999999999999763 248999
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcccccccc---CCCCChhHHHHH----HHHHH
Q 008623 187 FNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQ---KPGGSPLTRICQ----VVAAS 259 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~ 259 (559)
++++|+..|+|+.++|.+.+++.+..||++.|.++++.++++++.++..++...+. +++..+.++... .+...
T Consensus 140 f~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (493)
T PRK15462 140 FSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVL 219 (493)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877777777666555443221 111111011000 00000
Q ss_pred HhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHH
Q 008623 260 IRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIW 339 (559)
Q Consensus 260 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 339 (559)
..-. +......-. + +.....-.......... .....+ .+ ...++++|+...+.++
T Consensus 220 ~~~~-------~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~---~~~~~~-~~-~~~~er~r~~~~~~l~ 274 (493)
T PRK15462 220 LVAT-------PALITVLFW-K------------EWSVYALIVATIIGLGV---LAKIYR-KA-ENQKQRKELGLIVTLT 274 (493)
T ss_pred HHHH-------HHHHHHHHH-H------------HHHHHHHHHHHHHHHHH---HHHHHH-hc-CCHHHHhhHHHHHHHH
Confidence 0000 000000000 0 00000000000000000 000000 01 1125677888888999
Q ss_pred HHHHHHHHHhcccchhhhhcc-ccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHH
Q 008623 340 ATGIIFSAVYSQMSSLFVLQG-ERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRM 418 (559)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~ 418 (559)
+...+||..++|.++.+.... .++|+++. ++++++++++++|++.++++.|+..+++.+..+| +++++...|+
T Consensus 275 ~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~--g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~----~~~~s~~~Kf 348 (493)
T PRK15462 275 FFSMLFWAFAQQGGSSISLYIDRFVNRDMF--GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG----NRTVRIWGKF 348 (493)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHhccchhc--ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC----CCCCCcHHHH
Confidence 999999999999998765433 57788877 8999999999999999999999999866444322 2237889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHH
Q 008623 419 GIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSAL 498 (559)
Q Consensus 419 ~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~ 498 (559)
.+|+++++++++.+.+.... .+++ ..++.+|++..+++.++||...+|...+++.+.+|++.+|+.+|+
T Consensus 349 a~g~~~~g~~f~~l~~~~~~----~~~~-------~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~ 417 (493)
T PRK15462 349 ALGLGLMSAGFCILTLSARW----SAMY-------GHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGI 417 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhh----cCCC-------CCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHH
Confidence 99999999999888765432 1111 137889999999999999999999999999999999999999999
Q ss_pred HHHH-HHHHHHHhhHHHHHhh
Q 008623 499 SLTT-VALGNYLSSLLVTIVT 518 (559)
Q Consensus 499 ~~~~-~~lg~~lg~~l~~~v~ 518 (559)
+.+. ..+|+.++..+.+...
T Consensus 418 w~l~~~~~~~~~~g~~~~~~~ 438 (493)
T PRK15462 418 YMLLSGAIANYLAGVIADQTS 438 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 9874 4688877777766553
No 4
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=3.3e-34 Score=311.01 Aligned_cols=420 Identities=20% Similarity=0.284 Sum_probs=306.4
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
++|||.++.+++.+++++.++|++.++++.|+++++|++..+++++.+.+....++..+++|+++||++||||+++.+.+
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~ 89 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAI 89 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999993399999999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+++++.+.+.++. .....++++|+++++|.|...|+..++++|++|+++ ++|.+
T Consensus 90 ~~~~g~~~~~~~~----------------------~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~----~~~~~ 143 (489)
T PRK10207 90 VLAIGYFMTGMSL----------------------LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKD----PRLDG 143 (489)
T ss_pred HHHHHHHHHHHhc----------------------cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCc----hhhhc
Confidence 9999999888651 112335678999999999999999999999998875 13678
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcccccccc--CCCCChh--HHHHHH----HH
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQ--KPGGSPL--TRICQV----VA 257 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~----~~ 257 (559)
++++++++.|+|..+||.+++++.++.||++.|++.++.++++++.+...++..++. ++++++. ...... ..
T Consensus 144 ~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~ 223 (489)
T PRK10207 144 AFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVV 223 (489)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHH
Confidence 999999999999999999999999999999999998776666665555554443332 2222221 111100 00
Q ss_pred HHHh-hccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHH
Q 008623 258 ASIR-KHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLL 336 (559)
Q Consensus 258 ~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 336 (559)
.... ....+.. .... .-....+.+..... -++..+.++++ +++.+..+
T Consensus 224 ~~~~~~~~~~~~-~~~~----------------------~~~~~~~~i~~~~f-------~~~~~~~~~~~-r~r~~~~~ 272 (489)
T PRK10207 224 MIFVCAWLMHNV-EVAN----------------------LVLIVLSIVVTIIF-------FREAFKLDKTG-RNKMFVAF 272 (489)
T ss_pred HHHHHHHHHhhh-hHHH----------------------HHHHHHHHHHHHHH-------HHHHhcCCHHH-HHHHHHHH
Confidence 0000 0000000 0000 00000000000000 00000112223 34455566
Q ss_pred HHHHHHHHHHHHhcccchhhhhccc-cccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChh
Q 008623 337 PIWATGIIFSAVYSQMSSLFVLQGE-RMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQL 415 (559)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~ 415 (559)
.+++...+++..+.|....+..+.. .+++... |+.+++++++++|++.++++.|+.+++. +|+++|+.++++.
T Consensus 273 ~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~--G~~i~~~~~~~~n~~~iii~~pl~~~l~----~rl~~r~~~~~~~ 346 (489)
T PRK10207 273 VLMLEAVVFYILYAQMPTSLNFFAINNVHHEIL--GFSINPVSFQALNPFWVVVASPILAGIY----THLGSKGKDLSMP 346 (489)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHhcccccc--ceEECHHHHHhHhHHHHHHHHHHHHHHH----HHHhhCCCCCCcH
Confidence 6777788999999999776655443 4555444 6888999999999999999999988744 4444443347889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHH
Q 008623 416 QRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLC 495 (559)
Q Consensus 416 ~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~ 495 (559)
.++.+|+++++++++.++..... ..+. ....+.+++++.+++.++||++.+|...+++++.+|++++|.+
T Consensus 347 ~k~~~G~~l~~~~~~~~~~~~~~---~~~~-------~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~ 416 (489)
T PRK10207 347 MKFTLGMFLCSLGFLTAAAAGMW---FADA-------QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFI 416 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---hcCC-------CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHH
Confidence 99999999999888766543211 0011 1135778899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhh
Q 008623 496 SALSLTTVALGNYLSSLLVTIVT 518 (559)
Q Consensus 496 ~g~~~~~~~lg~~lg~~l~~~v~ 518 (559)
+|++++.+++|+.++..+.....
T Consensus 417 ~g~~~l~~~ig~~lg~~l~~~~~ 439 (489)
T PRK10207 417 LGMWFLTQAAAFLLGGYVATFTA 439 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999988887664
No 5
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=9e-34 Score=307.05 Aligned_cols=423 Identities=21% Similarity=0.283 Sum_probs=310.1
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhh--cCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQ--LDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 103 (559)
.+++|.++.+++.+++++.++|++.+++|.|++++ +|++..+++.+.+.+.+..+++++++|+++||++||||+++++
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 46788899999999999999999999999999887 9999999999999999999999999999999933999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcc
Q 008623 104 SIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHK 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 183 (559)
.++.+++.+++++. .+.+.+++++.+.|+|.|...|+..++++|++|+++. ++|
T Consensus 86 ~~~~~~g~~~~~~~-----------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~---~~r 139 (475)
T TIGR00924 86 GIVLMLGHFMLAMS-----------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDM---PRR 139 (475)
T ss_pred HHHHHHHHHHHHhc-----------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCc---ccc
Confidence 99999998887765 3356677889999999999999999999999987641 248
Q ss_pred ccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhH----HHHH-----
Q 008623 184 SSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLT----RICQ----- 254 (559)
Q Consensus 184 ~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~----- 254 (559)
++++++++++.|+|+.+||.+++++.+..||++.|.+.++..+++++.+....+..++.++++++.+ +..+
T Consensus 140 ~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (475)
T TIGR00924 140 DGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLAL 219 (475)
T ss_pred cceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHH
Confidence 8899999999999999999999999998999999999887666666655555544433222111110 0000
Q ss_pred --HHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHH
Q 008623 255 --VVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAI 332 (559)
Q Consensus 255 --~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 332 (559)
.+....+.... ...... ................... ...| ..++++ +++.
T Consensus 220 ~~~~~~~~~~~~~-~~~~~~-------------------~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~-~~~~ 271 (475)
T TIGR00924 220 LAALALVFFCAWL-MHHVVI-------------------ANILLMTVTLAVIIFFFRL---AFKP----RLDAVA-RNKM 271 (475)
T ss_pred HHHHHHHHHHHHH-HhccHH-------------------HHHHHHHHHHHHHHHHHHH---HHhc----cCCHHH-HhHH
Confidence 00000000000 000000 0000000000000000000 0001 111223 3334
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhh-hccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCC
Q 008623 333 VRLLPIWATGIIFSAVYSQMSSLFV-LQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNG 411 (559)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~ 411 (559)
...+++++...+++..+.|+.+.+. .+...++.+++ ++++++++++++|++.+++++|+.++++.++.+| +.+
T Consensus 272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~--~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~----~~~ 345 (475)
T TIGR00924 272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML--GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK----GKD 345 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc--ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC----CCC
Confidence 5577788889999999999998654 33344566655 7889999999999999999999998755444433 222
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhh
Q 008623 412 LTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAM 491 (559)
Q Consensus 412 ~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~ 491 (559)
.+...++.+|+++.++++..+++.... .+ +..+++.+|+++++++.++||.+..|..++++++.+|+++
T Consensus 346 ~~~~~k~~~G~~l~~~~~~~~~~~~~~----~~-------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~ 414 (475)
T TIGR00924 346 PTTPLKFTLGMLFCGASFLTFAASIWF----AD-------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL 414 (475)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhh----cC-------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH
Confidence 567778999999999999888765211 11 1224789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 492 RSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 492 rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
||+++|++++...+|+.+++.+.....+
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~ 442 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAV 442 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999888886643
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=2.7e-32 Score=297.29 Aligned_cols=415 Identities=20% Similarity=0.308 Sum_probs=301.6
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
.+++|.++.+++.+++++.++|++..+++.|+++++|++..+++++.+.+....+...+++|+++||++|||++++.+.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 36778899999999999999999999999999999999999999999888888888888999999993399999999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+.+++.+.+.++. .+...+.++++++|+|.|...++..++++|++|+++ .+|.+
T Consensus 97 ~~~ig~~l~~~~~----------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~----~~~~~ 150 (500)
T PRK09584 97 VLAIGYALVAWSG----------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDD----PRLDG 150 (500)
T ss_pred HHHHHHHHHHHhc----------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCc----hhhhh
Confidence 9998888776541 224456778899999999999999999999998764 13567
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcccccccc--CCCCChhH--HH----HHHHH
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQ--KPGGSPLT--RI----CQVVA 257 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~--~~----~~~~~ 257 (559)
++++++++.++|+.+||.+++++.+..||++.|.+.++..+++++.+++..+..++. ++++++.+ .. ..+..
T Consensus 151 ~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (500)
T PRK09584 151 AFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVA 230 (500)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHH
Confidence 889999999999999999999999999999999998876666665554443332221 22211111 11 11111
Q ss_pred HHHhh-ccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHH
Q 008623 258 ASIRK-HKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLL 336 (559)
Q Consensus 258 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 336 (559)
..... ...+.++... + .............. . ..+..++ .++++++..+
T Consensus 231 ~~~~~~~~~~~~~~~~----------------~-----~~~~~~~~~~~~~~-~--------~~~~~~~-~~~~~~~~~~ 279 (500)
T PRK09584 231 LIAIATWLLHNQEIAR----------------M-----ALGVVALGIVVIFG-K--------EAFAMKG-AARRKMIVAF 279 (500)
T ss_pred HHHHHHHHHhcchHHH----------------H-----HHHHHHHHHHHHHH-H--------HHhhcCH-HHHHHHHHHH
Confidence 11110 0000000000 0 00000000000000 0 0001122 3344555566
Q ss_pred HHHHHHHHHHHHhcccchhhhhccc-cccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChh
Q 008623 337 PIWATGIIFSAVYSQMSSLFVLQGE-RMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQL 415 (559)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~ 415 (559)
.+++...++|..+.|+++.+..+.. ..+.++. ++.+++++++++|++.++++.|+.+++ .+|+.+| .+..
T Consensus 280 ~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~--g~~i~~~~~~s~n~i~iil~~p~~~~~----~~~l~~r---~~~~ 350 (500)
T PRK09584 280 ILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSIL--GIAVEPEQYQALNPFWIMIGSPILAAI----YNKMGDR---LPMP 350 (500)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHhcccccc--ceEECHHHHHHHhHHHHHHHHHHHHHH----HHHhCcC---CCcH
Confidence 6778889999999999998776543 3454554 678899999999999999999999874 4555555 6678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHH
Q 008623 416 QRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLC 495 (559)
Q Consensus 416 ~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~ 495 (559)
+++.+|+++++++++.+.+.... .+++ ..++.+++++.+++.++||++.+|...+++.+.+|+++||++
T Consensus 351 ~~~~~G~~l~~l~f~~l~~~~~~----~~~~-------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~ 419 (500)
T PRK09584 351 HKFAIGMVLCSGAFLVLPLGAKF----ANDA-------GIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFI 419 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cCCC-------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHH
Confidence 89999999999999988765421 1122 246778999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHh
Q 008623 496 SALSLTTVALGNYLSSLLVTIV 517 (559)
Q Consensus 496 ~g~~~~~~~lg~~lg~~l~~~v 517 (559)
+|++.+...+|+.++..+.+..
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~~~ 441 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVANLM 441 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988888887776666543
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.95 E-value=3.5e-26 Score=253.47 Aligned_cols=337 Identities=33% Similarity=0.634 Sum_probs=273.7
Q ss_pred HHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 008623 45 AYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLK 124 (559)
Q Consensus 45 ~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (559)
+||++...+..|+.+.+|++.+++..+...+....++.+.++|+++|+++||++++.++.++..++..++++.. .|..
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a-~~~~- 79 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGA-IPSS- 79 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc-Cccc-
Confidence 68999999999999999999999999999999999999999999999999999999999999999998887642 2210
Q ss_pred CCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhh
Q 008623 125 PVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSV 204 (559)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i 204 (559)
.........+++++++++|.|++.|+..+..+|++++++ .++|.+++.++|+++|+|+.+++++
T Consensus 80 -------------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~---~~~~~s~F~~fY~~iNiGSlis~~i 143 (654)
T TIGR00926 80 -------------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQ---LSLRSRFFSFFYFAINAGSLISTII 143 (654)
T ss_pred -------------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccc---hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001223456788899999999999999999999998654 2247889999999999999999999
Q ss_pred hhhhccc-------cCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchhhhc
Q 008623 205 LVWIQDN-------EGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYET 277 (559)
Q Consensus 205 ~~~l~~~-------~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 277 (559)
.+++.+. .+|..+|.+++++++++++++....+++++.++.+++..++.+++..+.+++....+.
T Consensus 144 ~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~-------- 215 (654)
T TIGR00926 144 TPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSE-------- 215 (654)
T ss_pred HHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCc--------
Confidence 9998744 3699999999999999998888878777777777777777777777666543221110
Q ss_pred ccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhh
Q 008623 278 ADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFV 357 (559)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (559)
....++.|.+.. . ...++++++|++++++++++...++|..+.|.++.+.
T Consensus 216 ---------------~~~~~~ld~a~~------------~---~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~ 265 (654)
T TIGR00926 216 ---------------HWPLHWLDYAKD------------K---HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWT 265 (654)
T ss_pred ---------------ccchhHHHHhcc------------c---cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 000122322211 0 0234578889999999999999999999999999988
Q ss_pred hccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 008623 358 LQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLEL 437 (559)
Q Consensus 358 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~ 437 (559)
.|...++.+++ ++.+++++++.++++.++++.|+++..++|..+|.+.+ +++.+++++|+++++++++.++..+.
T Consensus 266 ~qa~~m~~~l~--g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~ 340 (654)
T TIGR00926 266 LQATRMDGDVG--GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQL 340 (654)
T ss_pred HHHHHhcCccC--CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88877777776 78899999999999999999999998888888776544 78999999999999999999999888
Q ss_pred HHHHH
Q 008623 438 IRLRM 442 (559)
Q Consensus 438 ~~~~~ 442 (559)
.+.++
T Consensus 341 ~~~~~ 345 (654)
T TIGR00926 341 KVNPT 345 (654)
T ss_pred HHhcc
Confidence 76543
No 8
>PRK03545 putative arabinose transporter; Provisional
Probab=99.92 E-value=2.7e-23 Score=219.54 Aligned_cols=173 Identities=8% Similarity=0.034 Sum_probs=144.2
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
|..++.+.+..+......+...+.+| .+.+++|.+..+.+++.+.+.+...++.++.|+++||+ ||||++..+.++..
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 33345555555555455454444455 45678999999999999999999999999999999999 99999999999989
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+.+.++ ++.+.+++.|+++|++.+...+...+++.|++|+++ |+++++
T Consensus 86 ~~~~~~~~~-----------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g 136 (390)
T PRK03545 86 ASHVLSALA-----------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALS 136 (390)
T ss_pred HHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHH
Confidence 888888776 457889999999999999888888999999999886 999999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
++..+.++|..++|.+++.+.+..|||+.|++.++..++..+..
T Consensus 137 ~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~ 180 (390)
T PRK03545 137 LLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLL 180 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888999999998887655554433
No 9
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.92 E-value=2.6e-23 Score=215.73 Aligned_cols=360 Identities=13% Similarity=0.079 Sum_probs=233.9
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMT 112 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 112 (559)
+.++...++...+.......+|.|.. +++.+..+.+++.+.+.+...++.++.|+++||+ ||||+++.+.++..++.+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~ 79 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVA 79 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHH
Confidence 34556777777777777788888875 5889999999999999999999999999999999 999999999888777777
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
...+....+ +.+.+.+++.|++.|++.+...+...+++.|++|+++ |++.+++.+.
T Consensus 80 ~~~~~~~~~------------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 135 (365)
T TIGR00900 80 VLPFVALLG------------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQA 135 (365)
T ss_pred HHHHHHHcC------------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHH
Confidence 766552111 1367888999999999999999999999999999886 9999999999
Q ss_pred HHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhH-HHHHHHHHHHhhccccCCCcc
Q 008623 193 SINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLT-RICQVVAASIRKHKVELPADK 271 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 271 (559)
+.++|..++|.+++++.+..||++.|++.++..+++.+..+....+..+++ ++++.+ +..+
T Consensus 136 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------------- 197 (365)
T TIGR00900 136 VRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAAS-EIQALSNAVLR----------------- 197 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCCc-cccccchhHHH-----------------
Confidence 999999999999999998899999998877665555444333221111000 000000 0000
Q ss_pred chhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHH-HHHHHHHHhc
Q 008623 272 SLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWA-TGIIFSAVYS 350 (559)
Q Consensus 272 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~ 350 (559)
+.. ..+ +...+.|.+...+...+ ..........
T Consensus 198 ----------------------------~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (365)
T TIGR00900 198 ----------------------------DTR-------------EGI-----KFVLKNPLLRTLLLLALLFNLVFAPAIV 231 (365)
T ss_pred ----------------------------HHH-------------hHH-----HHHHcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 000 000 00011111211111111 1111111111
Q ss_pred ccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 008623 351 QMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMI 430 (559)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l 430 (559)
.....+..+ .++.+. ...+.......+..++..++.++ +.+|. ++++.+..+..+.+++..
T Consensus 232 ~~~~~~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-------~~~~~~~~~~~~~~~~~~ 292 (365)
T TIGR00900 232 ALFPYVQSK------YLGRGS--THYGWVLAAFGLGALLGALLLGL----LGRYF-------KRMALMTGAIFVIGLAIL 292 (365)
T ss_pred HHhHHHHHH------HhCCch--HHHHHHHHHHHHHHHHHHHHHHH----HHHHh-------chhHHHHHHHHHHHHHHH
Confidence 111111111 111000 01112222233333344444433 33442 333445555555665555
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHh
Q 008623 431 AAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLS 510 (559)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 510 (559)
...+.. .+.+...+..++.+++.+...+...+++.+..|++.||++.|+.++..++++.++
T Consensus 293 ~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 353 (365)
T TIGR00900 293 VVGLTP-------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLG 353 (365)
T ss_pred HHHhhc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 544321 0245566677888999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhh
Q 008623 511 SLLVTIVTSI 520 (559)
Q Consensus 511 ~~l~~~v~~~ 520 (559)
+.+.|.+.+.
T Consensus 354 ~~~~g~l~~~ 363 (365)
T TIGR00900 354 LILAGPLADH 363 (365)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 10
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.92 E-value=1.8e-22 Score=213.65 Aligned_cols=351 Identities=11% Similarity=0.012 Sum_probs=231.4
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
.+|.+..++...+...++.....+.+|.|+++++|.|..+.+++.+.+.+...++.++.|+++||+ ||||+++.+.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHH
Confidence 344577788888899999888899999999999999999999999999999999999999999999 9999999999887
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+.+.++....+ ....+...+++.|++.|++.+...+...+++.|+.|+++ |+++.
T Consensus 92 ~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 150 (399)
T PRK05122 92 ALSGLLYLLAGLLAA---------------WPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVI 150 (399)
T ss_pred HHHHHHHHHhhhhhc---------------cchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccch
Confidence 777666554321110 001245678899999999999999998899999998886 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccC
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVEL 267 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (559)
+++..+.++|..+||.+++++.+..||++.+.+.++..++..+ +..+. ++.++++++..
T Consensus 151 ~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~----------------- 209 (399)
T PRK05122 151 SWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLL---LARPR-PAVPPVKGERL----------------- 209 (399)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH---HHhcC-CCCCCCCccch-----------------
Confidence 9999999999999999999999989999887765554333222 11111 11000000000
Q ss_pred CCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHH-HHHHHHHHHHH
Q 008623 268 PADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRL-LPIWATGIIFS 346 (559)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~ 346 (559)
++ . +..|+.... ....+....+.
T Consensus 210 -------------------------------------------------~~---~----~~~~~~~~~~~~~~~~~~~~~ 233 (399)
T PRK05122 210 -------------------------------------------------PF---R----RVLGRVWPYGMGLALASIGFG 233 (399)
T ss_pred -------------------------------------------------hH---H----HHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 000111100 00111111111
Q ss_pred HHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHH
Q 008623 347 AVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISI 426 (559)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~ 426 (559)
......+.++. +.+.. ..........+..++..++.++ +.+|. ++++.+..+..+.+
T Consensus 234 ~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~~~~~~~g~----l~~r~-------~~~~~~~~~~~~~~ 290 (399)
T PRK05122 234 TIATFITLYYA------ARGWD------GAALALTLFGVAFVGARLLFGN----LINRL-------GGLRVAIVSLLVEI 290 (399)
T ss_pred HHHHHHHHHHH------Hcccc------cchHHHHHHHHHHHHHHHHHHH----HHHHh-------ccHHHHHHHHHHHH
Confidence 11111111111 11101 0011111222223333333333 44443 33345666666666
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHH
Q 008623 427 LSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALG 506 (559)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 506 (559)
++.......+ +.+.+.+..++.+++.+...|.......+..|++.||+++|+++....+|
T Consensus 291 ~~~~~~~~~~--------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (399)
T PRK05122 291 LGLLLLWLAP--------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLS 350 (399)
T ss_pred HHHHHHHHhc--------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 6665554421 33445566788888888888888888889999999999999999999999
Q ss_pred HHHhhHHHHHhhhh
Q 008623 507 NYLSSLLVTIVTSI 520 (559)
Q Consensus 507 ~~lg~~l~~~v~~~ 520 (559)
..+++.+.|.+.+.
T Consensus 351 ~~~~~~~~g~l~~~ 364 (399)
T PRK05122 351 LGITGPLAGLVASW 364 (399)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999988763
No 11
>PRK12382 putative transporter; Provisional
Probab=99.92 E-value=1.4e-22 Score=214.02 Aligned_cols=351 Identities=10% Similarity=0.016 Sum_probs=228.1
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
..+.++.+.+..++...+.....+.+|.|+++++|.|..+.+++.+.+.+...++.++.|+++||+ ||||+++.+.+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~ 91 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLAC 91 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHH
Confidence 345677777788888888888889999999999999999999999999999999999999999999 9999999998876
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+........+. ....+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++
T Consensus 92 ~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~ 150 (392)
T PRK12382 92 GLAGLAYLLAAILPV---------------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVM 150 (392)
T ss_pred HHHHHHHHhhhcccc---------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhh
Confidence 665543322211111 011357788999999999999888888888999999886 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccC
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVEL 267 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (559)
++.+.+.++|..++|.+++++.+..||++.+.+..+..++.. .... +.++.+++++...
T Consensus 151 ~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~----------------- 209 (392)
T PRK12382 151 SWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAW---AFNG-TVRKVPAHAGERP----------------- 209 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHH---HHHH-hccCCCCCcccCc-----------------
Confidence 999999999999999999999888899987665443322222 1111 1111110000000
Q ss_pred CCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHH-HHHHHHHHHHH
Q 008623 268 PADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRL-LPIWATGIIFS 346 (559)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~ 346 (559)
++ + +..|.+.+. ....+....+.
T Consensus 210 -------------------------------------------------~~---~----~~~~~~~~~~~~~~l~~~~~~ 233 (392)
T PRK12382 210 -------------------------------------------------SL---W----SVVGLIWKPGLGLALQGVGFA 233 (392)
T ss_pred -------------------------------------------------hH---H----HHHHHHHHhHHHHHHHHHHHh
Confidence 00 0 000000000 00111111111
Q ss_pred HHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHH
Q 008623 347 AVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISI 426 (559)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~ 426 (559)
......+.++. +.+.. ..........+..++..++.++ +.+|++++ +.+..+..+.+
T Consensus 234 ~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~~~~~~~g~----l~~r~g~~-------~~~~~~~~~~~ 290 (392)
T PRK12382 234 VIGTFVSLYFA------SKGWA------MAGFTLTAFGGAFVLMRVLFGW----MPDRFGGV-------KVAIVSLLVET 290 (392)
T ss_pred HHHHHHHHHHH------hcCCc------hhHHHHHHHHHHHHHHHHHHHH----HHHhcCCC-------eehHHHHHHHH
Confidence 11111111111 11111 0111111222223334444443 44554333 35556666666
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHH
Q 008623 427 LSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALG 506 (559)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 506 (559)
++++.....+ +.+...+..++.+++.+...|.......+..|+++||+++|++++...+|
T Consensus 291 ~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (392)
T PRK12382 291 VGLLLLWLAP--------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIA 350 (392)
T ss_pred HHHHHHHHcc--------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 6665544321 33445556678888888888888888899999999999999999999999
Q ss_pred HHHhhHHHHHhhhh
Q 008623 507 NYLSSLLVTIVTSI 520 (559)
Q Consensus 507 ~~lg~~l~~~v~~~ 520 (559)
+.+++.+.+.+.+.
T Consensus 351 ~~ig~~~~g~l~~~ 364 (392)
T PRK12382 351 YGVSGPLAGMLATS 364 (392)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998874
No 12
>PRK10054 putative transporter; Provisional
Probab=99.91 E-value=6.3e-23 Score=217.42 Aligned_cols=356 Identities=13% Similarity=0.103 Sum_probs=236.3
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
.+|+++.++...++...+++...++++.|+++++|++..+.+++.+.+.+...+..++.|+++||+ |||+++.++.++.
T Consensus 5 ~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~~ 83 (395)
T PRK10054 5 LRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITAF 83 (395)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHHH
Confidence 456688888999999999999999999999999999999999999999999999999999999998 9999999998888
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+...+. ++.+.+++.+.+.+.+.+...+...++..|.+|+++ |++++
T Consensus 84 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 134 (395)
T PRK10054 84 ASGFIAIPLV-----------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIF 134 (395)
T ss_pred HHHHHHHHHH-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHH
Confidence 8877777665 346666777777787777777888889999998876 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccC
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVEL 267 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (559)
++.+...++|..++|.+++++.+ .+|+.+|.+.+++.++.++...+..++.+ ++++++....
T Consensus 135 g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~--~~~~~~~~~~--------------- 196 (395)
T PRK10054 135 SLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSE--KAIATETGSV--------------- 196 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccc--cccccchhhh---------------
Confidence 99999999999999999998875 78999999887766665444333222111 1100000000
Q ss_pred CCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHH-HHHHHHHHH
Q 008623 268 PADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLP-IWATGIIFS 346 (559)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~ 346 (559)
+ +.++..+.|++..... ..+......
T Consensus 197 --------------------------------------------------~---~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 197 --------------------------------------------------W---SPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred --------------------------------------------------h---hhhhhccCceehHHHHHHHHHHHHHH
Confidence 0 0000000111111111 111111111
Q ss_pred HHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHH
Q 008623 347 AVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISI 426 (559)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~ 426 (559)
........+.... .+.... ....+.+...+.+..+...+..++ ..+| .++++.+..++.+..
T Consensus 224 ~~~~~~~~~~~~~---~~~~~~----~~~~g~~~~~~~~~~~~~~~~~g~----~~~~-------~~~~~~l~~~~~~~~ 285 (395)
T PRK10054 224 AFASCISQYVMVV---ADSDFA----EKVVAVVLPVNAAMVVSLQYSVGR----RLNA-------ANIRPLMTAGTLCFV 285 (395)
T ss_pred HhhhhHHHHHHHh---cccchH----HHHHHHHHHhhhhheeeehhHHHH----HHcc-------CCchhHHHHHHHHHH
Confidence 1111111111110 011110 001112233333444444444333 3333 334456667777777
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHH
Q 008623 427 LSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALG 506 (559)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 506 (559)
+++..+.... .+.+.+.+..++.+++++...|..++.+.+.+|++.+|++.|..+ ...+|
T Consensus 286 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G 345 (395)
T PRK10054 286 IGLVGFIFSG-------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLG 345 (395)
T ss_pred HHHHHHHHcc-------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHH
Confidence 7666554321 133344556688999999999999999999999999999998765 56689
Q ss_pred HHHhhHHHHHhhhhhc
Q 008623 507 NYLSSLLVTIVTSIST 522 (559)
Q Consensus 507 ~~lg~~l~~~v~~~~~ 522 (559)
..+||.+.|.+.+..+
T Consensus 346 ~~~Gp~~~G~l~~~~g 361 (395)
T PRK10054 346 AAINPLVSGVILTTLP 361 (395)
T ss_pred HHHHHHHHHHHHHHcC
Confidence 9999999999988543
No 13
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.91 E-value=8e-23 Score=216.96 Aligned_cols=349 Identities=13% Similarity=0.103 Sum_probs=234.6
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMT 112 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 112 (559)
+.++...++...+.+.+.+.++.|+++++|.+..+.|.+.+...+...+..+++|+++||+ |||++++.+.++..++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 5677889999999999999999999999999999999999999999999999999999998 999999999999888888
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
.+... ++.+.+++.|++.|++.+...|...+++.|.+|+++ |+++.++.+.
T Consensus 92 ~~~~~-----------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~ 142 (400)
T PRK11646 92 TMAIA-----------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMM 142 (400)
T ss_pred HHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHH
Confidence 77655 357778899999999998888888999999999876 9999999999
Q ss_pred HHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccc
Q 008623 193 SINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKS 272 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (559)
..++|..+||.+++++. ..||++.|++.++..++..+...+..++.+. ++..++..+
T Consensus 143 ~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~--------------------- 199 (400)
T PRK11646 143 QDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPVRE--------------------- 199 (400)
T ss_pred HHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhhHH---------------------
Confidence 99999999999999998 6799999998776555444333222221110 000000000
Q ss_pred hhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 008623 273 LLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQM 352 (559)
Q Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (559)
.+ +...+.+++...... ...++....+.
T Consensus 200 --------------------------------------------~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~ 227 (400)
T PRK11646 200 --------------------------------------------GM-----TRVLRDKRFVTYVLT---LTGYYMLAVQV 227 (400)
T ss_pred --------------------------------------------HH-----HHHHcCchHHHHHHH---HHHHHHHHHHH
Confidence 00 000001111111111 11111111111
Q ss_pred chhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHH
Q 008623 353 SSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAA 432 (559)
Q Consensus 353 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~ 432 (559)
....+. +.++..+ .....+...++..+..+.......+ ..+ +| .+..+.+..+.++.+++.+.+
T Consensus 228 ~~~~p~---~~~~~~~---~~~~~g~l~~~~~~~~~~~~~~~~~----~~~---~r---~~~~~~~~~~~~~~~~~~~~l 291 (400)
T PRK11646 228 MLMLPI---MVNDIAG---SPSAVKWMYAIEACLSLTLLYPIAR----WSE---KR---FRLEHRLMAGLLIMSLSMFPI 291 (400)
T ss_pred HHhhhh---hHHhhcC---CchHHHHHHHHHHHHHHHHHHHHHH----HHH---Hh---cchhHHHHHHHHHHHHHHHHH
Confidence 111111 1111111 0011111222222222222212222 111 22 333445667777777766655
Q ss_pred HHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhH
Q 008623 433 AVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSL 512 (559)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~ 512 (559)
...+ +.+.+.+..++.+++.+...|...+++.+.+|++.||+++|+.++..++|+.+|+.
T Consensus 292 ~~~~--------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~ 351 (400)
T PRK11646 292 GMVS--------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYI 351 (400)
T ss_pred HHhh--------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhccc
Confidence 5432 23344445567788888888999999999999999999999999999999999999
Q ss_pred HHHHhhhhhc
Q 008623 513 LVTIVTSIST 522 (559)
Q Consensus 513 l~~~v~~~~~ 522 (559)
+.|++.+..+
T Consensus 352 l~G~l~~~~~ 361 (400)
T PRK11646 352 GGGWLFDLGK 361 (400)
T ss_pred chHHHHHHHh
Confidence 9999988643
No 14
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.91 E-value=1.4e-22 Score=221.18 Aligned_cols=401 Identities=12% Similarity=0.021 Sum_probs=241.7
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
|..+..+++..++..+....+..-+|.. .+++|.+..+.+|+.+.+.++..++.++.|+++||+ |||++++.+.+++.
T Consensus 5 ~~~~~~~~~~~~~~~ld~tiv~~a~p~i-~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~~ 82 (495)
T PRK14995 5 WLTLVIIVLVYIPVAIDATVLHVAAPTL-SMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 4445566666677666666666667655 578999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCC-CcchHhhhccccch
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFD-DADEAEKKHKSSFF 187 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~ 187 (559)
++.+.++.+ ++.+.++++|+++|+|.++..|.....+.+.++ +++ |++++
T Consensus 83 ~~~~~~~~a-----------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~ 133 (495)
T PRK14995 83 LASLAAAFS-----------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMAL 133 (495)
T ss_pred HHHHHHHHc-----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHH
Confidence 999988876 468889999999999999988887777877764 454 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHH-HHHH-----HHHHh
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRI-CQVV-----AASIR 261 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~ 261 (559)
+++....++|..+||.+++++.++.|||+.|++...+.++.+++.++..++.+.++.++.+.... .... .....
T Consensus 134 g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~ 213 (495)
T PRK14995 134 GVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAK 213 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887666655554444433322111111111111 0000 00000
Q ss_pred hccccCCCccchhhhcccccccccCCcccCCCCccchhhhhh-hhhccccccccCCCccccchhhHHHHHHHHHHHHHHH
Q 008623 262 KHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAA-VEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWA 340 (559)
Q Consensus 262 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 340 (559)
. ..+...+...... .-......... ...+. + ...|..+ .+.-+.|.+.......+
T Consensus 214 ~-~~~~~~~~~~~~~----------------~~~~~~~~l~~f~~~e~-~---~~~p~~~---~~lf~~~~~~~~~~~~~ 269 (495)
T PRK14995 214 T-ALKGFLSLWVTSL----------------TLLTGALLLGLFIRTQL-A---ASRPMID---MRLFTHRIILSGVVMAM 269 (495)
T ss_pred h-ccccCCchHHHHH----------------HHHHHHHHHHHHHHHHh-c---CCCCCcC---HHHhCCcccHHHHHHHH
Confidence 0 0000000000000 00000000000 00000 0 1112110 01111122211111111
Q ss_pred HHHHHHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHH
Q 008623 341 TGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGI 420 (559)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~ 420 (559)
. .+..+.....++. .+++...|. -....+.......+...+..++.++ +.+|.+ +++.+..
T Consensus 270 ~---~~~~~~~~~~~~~---~~lq~v~g~--s~~~ag~~~~~~~~~~~~~~~~~g~----l~~r~g-------~~~~~~~ 330 (495)
T PRK14995 270 T---AMITLVGFELLMA---QELQFVHGL--SPLEAGMFMLPVMVASGFSGPIAGI----LVSRLG-------LRLVATG 330 (495)
T ss_pred H---HHHHHHHHHHHHH---HHHHHHcCC--CHHHHHHHHHHHHHHHHHHHHHHHH----HHHHcC-------chHHHHH
Confidence 1 1111111111111 111211120 0011112222233444444555544 445533 3345667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHH
Q 008623 421 GLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSL 500 (559)
Q Consensus 421 G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~ 500 (559)
|+++.+++.+.+...... .+.+...+..++.|+|.+...+.....+.+.+|++.+|.+.++++
T Consensus 331 g~~~~~~~~~~l~~~~~~-----------------~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (495)
T PRK14995 331 GMALSALSFYGLAMTDFS-----------------TQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIET 393 (495)
T ss_pred HHHHHHHHHHHHHHhcCC-----------------CchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHH
Confidence 777777776655543211 233444556788899999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHhhhh
Q 008623 501 TTVALGNYLSSLLVTIVTSI 520 (559)
Q Consensus 501 ~~~~lg~~lg~~l~~~v~~~ 520 (559)
+.+++|+.+|+.+.+.+.+.
T Consensus 394 ~~~~lG~~~G~ai~g~i~~~ 413 (495)
T PRK14995 394 MAYELGAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998753
No 15
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.90 E-value=3.5e-22 Score=212.97 Aligned_cols=356 Identities=12% Similarity=0.079 Sum_probs=225.2
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
+...+...++...+.......+|.+.+ +++.+..+.+++.+...+...++.++.|+++||+ |||++++.+.++..++.
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~~ 96 (417)
T PRK10489 19 FRAVFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLGF 96 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHHH
Confidence 445555667777777767777777764 5777999999999999999999999999999999 99999998887777666
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
..+......+ ..+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++.+
T Consensus 97 ~~~~~~~~~~------------------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 152 (417)
T PRK10489 97 IGLALNAFLP------------------EPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITM 152 (417)
T ss_pred HHHHHHHHcC------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHH
Confidence 5554321111 1346777888999999988888888899999999876 899999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccC-CCCChhHHHHHHHHHHHhhccccCCCc
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQK-PGGSPLTRICQVVAASIRKHKVELPAD 270 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (559)
...++|..+||.+++.+.+..+|++.|.+.++..++.++..+..++ .++++ +++++.++.
T Consensus 153 ~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~------------------ 213 (417)
T PRK10489 153 LTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA-LPPPPQPREHPLRSL------------------ 213 (417)
T ss_pred HHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC-CCCCCcccccchHHH------------------
Confidence 9999999999999999988889999998877666555544333221 11100 000000000
Q ss_pred cchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008623 271 KSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYS 350 (559)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 350 (559)
. .++ +.+.+.+.+.......+......
T Consensus 214 -------------------------------~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~---- 240 (417)
T PRK10489 214 -------------------------------L-------------AGF-----RFLLASPVVGGIALLGGLLTMAS---- 240 (417)
T ss_pred -------------------------------H-------------HHH-----HHHHcChHHHHHHHHHHHHHHHH----
Confidence 0 000 00011111111111111111111
Q ss_pred ccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 008623 351 QMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMI 430 (559)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l 430 (559)
.....++ .+.++..+. -....+.+.....++.++...+..+ +.+| .++.+.+..+.++.+++++
T Consensus 241 ~~~~~~p---~~~~~~~g~--~~~~~g~~~~~~~~g~~ig~~~~~~----l~~~-------~~~~~~l~~~~~~~~~~~~ 304 (417)
T PRK10489 241 AVRVLYP---ALADEVWQM--GAAQIGLLYAAVPLGAALGALTSGW----LAHS-------ARPGLLMLLSTLGSFLAVG 304 (417)
T ss_pred hHHHhhH---HHHHhccCC--ChhHhHHHHHHHHHHHHHHHHHHHH----hhhc-------cCcchHHHHHHHHHHHHHH
Confidence 1111111 111221220 0001122222333333334433333 2222 2223455666666666665
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHh
Q 008623 431 AAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLS 510 (559)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 510 (559)
.+... .+.+...+..++.+++.+...+...+++.+..|++.||+++|++++..++|+.+|
T Consensus 305 ~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g 364 (417)
T PRK10489 305 LFGLM--------------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIG 364 (417)
T ss_pred HHHcc--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHH
Confidence 55432 1334455666778888887788888999999999999999999999999999999
Q ss_pred hHHHHHhhhhh
Q 008623 511 SLLVTIVTSIS 521 (559)
Q Consensus 511 ~~l~~~v~~~~ 521 (559)
+.+.|.+.+..
T Consensus 365 ~~l~G~l~~~~ 375 (417)
T PRK10489 365 AALLGGLGAMM 375 (417)
T ss_pred HHHHHHHHHHh
Confidence 99999998754
No 16
>PRK10504 putative transporter; Provisional
Probab=99.90 E-value=8.7e-22 Score=213.24 Aligned_cols=177 Identities=13% Similarity=0.119 Sum_probs=152.3
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
.+.+|.+.+..++.....+.+.+.+|.|.+ ++|.+..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 345788888888888888888898988875 6999999999999999999999999999999999 99999999988888
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+.+.+. .+.+.+++.|+++|++.+...|...+++.|.+|+++ |+++.+
T Consensus 87 ~~~~~~~~~-----------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 137 (471)
T PRK10504 87 LGSLFCALS-----------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMT 137 (471)
T ss_pred HHHHHHHHh-----------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHH
Confidence 877776654 346778899999999999999999999999999876 899999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
+.+...++|..++|.+++++.+..||++.|.+.....++..+......
T Consensus 138 ~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~ 185 (471)
T PRK10504 138 FVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLM 185 (471)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999988766555554444433
No 17
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.90 E-value=1e-22 Score=210.36 Aligned_cols=166 Identities=19% Similarity=0.326 Sum_probs=144.1
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHh
Q 008623 36 LGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLT 115 (559)
Q Consensus 36 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 115 (559)
++..++.........+.+|.++.+++|.+..+.+++.+.+.+...++.++.|+++||+ |||+++..+.++.+++.+...
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4556667777777777787788899999999999999999999999999999999998 999999999998888855554
Q ss_pred hhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHh
Q 008623 116 VTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSIN 195 (559)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 195 (559)
++ .+.+.+++.|++.|++.+...+...+++.|++|+++ |++.+++.+.+.+
T Consensus 81 ~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~ 131 (352)
T PF07690_consen 81 FA-----------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFS 131 (352)
T ss_dssp HH-----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHH
T ss_pred hh-----------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhh
Confidence 43 235588999999999999999999999999999986 9999999999999
Q ss_pred HHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 196 IGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 196 iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
+|..++|.+++.+.+..+|+++|++.++..++..++
T Consensus 132 ~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il 167 (352)
T PF07690_consen 132 LGSILGPLLGGFLISYFGWRWAFLISAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHH
T ss_pred hhhhcccchhhhhhhccccccccccccchhhhhhhh
Confidence 999999999999998899999999988877776654
No 18
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.90 E-value=1e-21 Score=208.25 Aligned_cols=175 Identities=14% Similarity=0.125 Sum_probs=145.2
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
+++|..+...+...+++.+..+......| .+.+++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~ 88 (406)
T PRK11551 11 SRLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVA 88 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHH
Confidence 34555555666666666666666555555 44578999999999999999999999999999999999 99999999988
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+..++.+.+.+. .+.+.+++.|++.|++.+...+...+++.|++|+++ |++
T Consensus 89 ~~~~~~~~~~~~-----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~ 139 (406)
T PRK11551 89 LFGLFSLATAQA-----------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGT 139 (406)
T ss_pred HHHHHHHHHHHh-----------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHH
Confidence 887777766654 357778899999999999999999999999999886 999
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
++++.+...++|+.+++.+++.+.+..+|++.|++.+++.++..+.
T Consensus 140 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK11551 140 AVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPL 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888889999998877654444433
No 19
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=1.9e-21 Score=205.95 Aligned_cols=174 Identities=14% Similarity=0.191 Sum_probs=149.4
Q ss_pred cCCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHH
Q 008623 25 KTGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFS 104 (559)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 104 (559)
.++.|+.+..+.+..++.....|...+.+|.+ .+++|.++.+.++..+.+.+...++.++.|+++||+ |||++++.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~~ 92 (394)
T PRK10213 15 TRPNWSAVFSVAFCVACLIIVEFLPVSLLTPM-AQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILFA 92 (394)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHHH
Confidence 34566666666666666666666666667665 568999999999999999999999999999999998 9999999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccc
Q 008623 105 IIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKS 184 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 184 (559)
++..++.+.+.++ .+.+.+++.|++.|++.+...+...+++.|++|+++ |+
T Consensus 93 ~~~~~~~~~~~~~-----------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~ 143 (394)
T PRK10213 93 VLLTLSCLLVSFA-----------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VP 143 (394)
T ss_pred HHHHHHHHHHHHH-----------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HH
Confidence 9998888877665 468889999999999999999999999999999886 99
Q ss_pred cchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHH
Q 008623 185 SFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAV 229 (559)
Q Consensus 185 ~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~ 229 (559)
++.++...+.++|..++|.+++++.+..||++.|++.++..++..
T Consensus 144 ~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~ 188 (394)
T PRK10213 144 KALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCI 188 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998776554443
No 20
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=1.3e-21 Score=212.11 Aligned_cols=399 Identities=14% Similarity=0.123 Sum_probs=238.8
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
+..+++..++..+........+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIPT-IAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 344455555555555555555554 5578999999999999999999999999999999999 99999999999999888
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+.+..+ .+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++++
T Consensus 82 ~~~~~~-----------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~ 132 (485)
T TIGR00711 82 LLCGVA-----------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWG 132 (485)
T ss_pred HHHhCc-----------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHH
Confidence 887765 457788999999999999999999999999999886 999999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHH-HHHHHHHHhhccccCCCc
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRI-CQVVAASIRKHKVELPAD 270 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 270 (559)
....+|..++|.+++++.+..||++.|++.+...++..+..++..++.++++.++.+.... ..........
T Consensus 133 ~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~-------- 204 (485)
T TIGR00711 133 LTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLL-------- 204 (485)
T ss_pred HHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHH--------
Confidence 9999999999999999999999999999887666555544444333322111111111110 0000000000
Q ss_pred cchhhhcccccccccCCcccCCCCccchh-hh----hhhhhccccccccCCCccccchhhHHHHHHHHH-HHHHHHHHHH
Q 008623 271 KSLLYETADAESNITGSRKLDHTKDFSFF-DK----AAVEIQSDNIKESVNPWRLCTVTQVEELKAIVR-LLPIWATGII 344 (559)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~ 344 (559)
+...+.++.. ..+........ .. ......... ...|.. + .+....|.+.. .+...+....
T Consensus 205 ----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ 270 (485)
T TIGR00711 205 ----YGLSEGPERG----WFDSNEILILSITGLVAIIAFVVWELT---DDNPLV--D-LRLFKYRNFTIGCVYMSLLGLG 270 (485)
T ss_pred ----HHHhhCCCCC----CCCchHHHHHHHHHHHHHHHHHHHHHc---CCCCcc--C-HHHHcCCChHHHHHHHHHHHHH
Confidence 0000000000 00000000000 00 000000000 011110 0 00111111111 1111111111
Q ss_pred HHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHH
Q 008623 345 FSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFI 424 (559)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~ 424 (559)
++......+. +++...|. -....+.......+..++..++..+ +.+| .++++.+.+|.++
T Consensus 271 ~~~~~~~~p~-------~~~~~~g~--s~~~~g~~~~~~~~~~~~~~~~~g~----l~~r-------~~~~~~~~~g~~~ 330 (485)
T TIGR00711 271 LYGSFYLLPL-------YLQQVLGY--TALQAGLHILPVGLAPMLSSPIAGR----MGDK-------IDPRKLVTIGLIL 330 (485)
T ss_pred HHHHHHHHHH-------HHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHH----HHhh-------cCcHHHHHHHHHH
Confidence 1111111111 11112220 0001122223333444455555544 3344 3444566777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHH
Q 008623 425 SILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVA 504 (559)
Q Consensus 425 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~ 504 (559)
.+++...+..... ...+.+......++.+++.+...+.....+.+..|++++|.++|+.++.+.
T Consensus 331 ~~~~~~~~~~~~~----------------~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 394 (485)
T TIGR00711 331 YAVGFYWRAFTFT----------------PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQ 394 (485)
T ss_pred HHHHHHHHhccCC----------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHH
Confidence 7777766552110 012444555667888999888888888888899999999999999999999
Q ss_pred HHHHHhhHHHHHhhh
Q 008623 505 LGNYLSSLLVTIVTS 519 (559)
Q Consensus 505 lg~~lg~~l~~~v~~ 519 (559)
+|+.+|+.+.+.+.+
T Consensus 395 ~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 395 LGGSIGTALITTILT 409 (485)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998875
No 21
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.89 E-value=2.4e-21 Score=204.21 Aligned_cols=173 Identities=16% Similarity=0.232 Sum_probs=146.7
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
+.+|+.+....+..++.....+.+....+ .+++++|.+..+.+++.+.+.+...++.++.|+++||+ |||++++.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 35566666667777777777776666555 56788999999999999999999999999999999999 99999999998
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+.+++.+.+.++ .+.+.+++.|++.|++.+...+...+++.|++|+++ |++
T Consensus 86 ~~~~~~~~~~~~-----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~ 136 (405)
T TIGR00891 86 LFSAGTLACGFA-----------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNK 136 (405)
T ss_pred HHHHHHHHHHHh-----------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhH
Confidence 888888777665 457778899999999999999999999999999887 999
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccC--chhhhHHHHHHHHHHH
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEG--WGWGFGIPAVAMAIAV 229 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g--~~~~f~i~~~~~~i~~ 229 (559)
+.++.+.+.++|..+++.+++.+.+..+ |++.|.+.++..++.+
T Consensus 137 ~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 137 ASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998887666 9999987665444443
No 22
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.89 E-value=7e-22 Score=209.34 Aligned_cols=174 Identities=16% Similarity=0.027 Sum_probs=143.6
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhh-----hHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSST-----ASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-----~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 103 (559)
.|.+..+++..++...++....+.+|.|.+ ++|.+..+ .+++.+.+.+...++.++.|+++||+ |||++++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~ 90 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRS 90 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHH
Confidence 345666777888888888888899999985 58888654 47888899999999999999999998 999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcc
Q 008623 104 SIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHK 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 183 (559)
.++.+++.+.+... .+.+.+++.|++.|++.+ ..+...+++.|++|+++ |
T Consensus 91 ~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~ 140 (408)
T PRK09874 91 ALGMGIVMVLMGLA-----------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------S 140 (408)
T ss_pred HHHHHHHHHHHHHH-----------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------h
Confidence 88888877776654 457778889999998765 45777788889998876 8
Q ss_pred ccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 184 SSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 184 ~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+++.++.+...++|..++|.+++.+.+..+|++.|.+.++..++..+..++
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988899999999887766555544433
No 23
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.89 E-value=3.1e-21 Score=205.67 Aligned_cols=178 Identities=13% Similarity=0.108 Sum_probs=145.7
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
+|+.++.+.+..++.......+.. ....+++++|++..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 455455555555554444444443 44478999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.++.+++ ++.+.+++.|++.|++.+...|....++.|++|+++ |++..
T Consensus 84 ~~~~~~~~~~-----------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~ 134 (412)
T TIGR02332 84 GIASTATMFA-----------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARAN 134 (412)
T ss_pred HHHHHHHHHh-----------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHH
Confidence 9988888776 457788999999999999999988899999999886 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhcc------ccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 188 NWFYFSINIGALIASSVLVWIQD------NEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~------~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
++++.+..+|..+++.+++++.+ ..|||++|++.++..++..+..++..
T Consensus 135 ~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~ 189 (412)
T TIGR02332 135 ALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWL 189 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999988763 36899999988766655444444333
No 24
>TIGR00895 2A0115 benzoate transport.
Probab=99.89 E-value=4.7e-21 Score=201.13 Aligned_cols=172 Identities=13% Similarity=0.168 Sum_probs=139.3
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
.++.+...+...+......+.... ...++.+++|.+..+.+++.+...++..++.++.|+++||+ |||++++.+.++.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~ 92 (398)
T TIGR00895 15 QWRAIILSFLIMLMDGYDLAAMGF-AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLF 92 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHH
Confidence 344444444444444444444444 44456678999999999999999999999999999999999 9999999999888
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+...+. .+.+.+++.+++.|++.+...+...+++.|.+|+++ |++++
T Consensus 93 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~ 143 (398)
T TIGR00895 93 SVFTLLCALA-----------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAV 143 (398)
T ss_pred HHHHHHHHHc-----------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhH
Confidence 8877776654 346778889999999999999999999999999876 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 230 (559)
++.+.+.++|..++|.+++++.+..||++.|++.++..++..+
T Consensus 144 ~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~ 186 (398)
T TIGR00895 144 GLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLL 186 (398)
T ss_pred hhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHH
Confidence 9999999999999999999999999999999887644444433
No 25
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.89 E-value=3.4e-23 Score=217.69 Aligned_cols=366 Identities=38% Similarity=0.634 Sum_probs=241.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcc
Q 008623 97 YWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDAD 176 (559)
Q Consensus 97 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 176 (559)
.|+++++.++..+|++++.++.. |... ....+...++++++++++|.|++.|++.++++||+++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~-~~~~-------------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~ 66 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAI-PPSL-------------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDD 66 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHT-SSSC-------------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTT
T ss_pred CHhhhHHHHHHHHHHHHhHHHHh-cchh-------------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccc
Confidence 47899999999999999877743 3211 122346789999999999999999999999999999874
Q ss_pred hHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcccccccc-CCCCChhHH-HHH
Q 008623 177 EAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQ-KPGGSPLTR-ICQ 254 (559)
Q Consensus 177 ~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~-~~~ 254 (559)
.++|.++++++|++.|+|+.+++.+.+++.++.||.+.|.++++.++++++.++..+++++.. ++.+.+..+ ...
T Consensus 67 ---~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~ 143 (372)
T PF00854_consen 67 ---DSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKL 143 (372)
T ss_dssp ---TTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHH
T ss_pred ---hhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHH
Confidence 246889999999999999999999999999999999999999999999999998888887776 666666666 344
Q ss_pred HHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHH
Q 008623 255 VVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVR 334 (559)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 334 (559)
+.....+++....+....++....+..+.. ..... ...........+... ....+ ++.++++..+.+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~k~~~~ 212 (372)
T PF00854_consen 144 VLVAAFKKRKLAVPKGSSWLDWALFQYSER----SIFGI--IVFIRAAVIFFPEIF---FWALF--CQVQRVEELKALIR 212 (372)
T ss_dssp HHHHHHHHHCCCH-HHHHHHHHHHHHHCCC----CCCCC--CCHHHHHHHHCCCHH---HHTTT--SSTTTHHHCCHHHC
T ss_pred HHHHHHHHhhcccccchHHHHHhhhhhhhh----hhhhh--hhhccchhhhhhhhh---hcccC--Cccceeeeeeeeee
Confidence 444455554444432222222221111000 00000 001111111111100 01111 23456677777778
Q ss_pred HHHHHHHHHHHHHHhcccchhhhhccccccCCCCCcc-ceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCC
Q 008623 335 LLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSS-FKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLT 413 (559)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~ 413 (559)
.++.+.+...+..++.+.......+...++...+ + ++++++++++++++.++++.|+.+++++|+.++ +++ .+
T Consensus 213 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~~~---~~ 286 (372)
T PF00854_consen 213 FLPIFLFWIFYWQMYSQLNTFFLLQVPQMDRGIG--GLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-GIQ---PS 286 (372)
T ss_dssp HHHCCCHHHHHHHHCTCCHHHHHHCGGGTTT-SS--------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT---------
T ss_pred ccccCeEEEEeeehhhhhhhHHHHhccccccccc--cccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh-ccc---ch
Confidence 8888888888888888888877777777766666 6 889999999999999999999999999999882 333 78
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHH
Q 008623 414 QLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRS 493 (559)
Q Consensus 414 ~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg 493 (559)
...++.+|++++.+++...+..+..++...+++| ..+.++.+..++++.++|.+..+...+..+|.+|++..+
T Consensus 287 ~~~k~~~G~~~~~~~~~~~~~v~~~r~~~~~~~~-------~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~ 359 (372)
T PF00854_consen 287 PPQKFGIGMVFAILAMFVAAIVEIRRLCYAQPCG-------KVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPS 359 (372)
T ss_dssp -HHHHHHH-HHHHHHHHTTTHHHH---HH----T-------T--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SS
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhhcccccC-------CCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhH
Confidence 8999999999999999988888776555555444 244477779999999999999999999777777777777
Q ss_pred HHHHHHHHHH
Q 008623 494 LCSALSLTTV 503 (559)
Q Consensus 494 ~~~g~~~~~~ 503 (559)
..+|+++...
T Consensus 360 ~m~~~~~~~~ 369 (372)
T PF00854_consen 360 SMMGIWFALS 369 (372)
T ss_dssp SSTHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 7777777554
No 26
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.89 E-value=2.4e-21 Score=217.49 Aligned_cols=155 Identities=18% Similarity=0.142 Sum_probs=130.4
Q ss_pred hhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCC
Q 008623 51 TNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGP 130 (559)
Q Consensus 51 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (559)
..+..++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++++++++.+++.++++++
T Consensus 187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa------------- 252 (742)
T TIGR01299 187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV------------- 252 (742)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH-------------
Confidence 3444566778999999999999999999999999999999999 99999999998888888877765
Q ss_pred CCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcc
Q 008623 131 RGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~ 210 (559)
.+.+.++++|++.|++.++..+...++++|.+|++. |++.+++.+....+|.++++.++.++..
T Consensus 253 ----------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~ 316 (742)
T TIGR01299 253 ----------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIP 316 (742)
T ss_pred ----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788999999999999999999999999999886 9999999999999999999987765543
Q ss_pred c-------------cCchhhhHHHHHHHHHHHHHHHhc
Q 008623 211 N-------------EGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 211 ~-------------~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
. .+||+.+++.++..++.++..++.
T Consensus 317 ~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~l 354 (742)
T TIGR01299 317 HYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFM 354 (742)
T ss_pred hccchhccccccccccHHHHHHHHHHHHHHHHHHHHHc
Confidence 2 358888887776666555544443
No 27
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.89 E-value=9.4e-21 Score=195.50 Aligned_cols=180 Identities=12% Similarity=0.123 Sum_probs=164.3
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
..|..++.+.++.|+....=+.....+|. +.+++|.|..++|+.++.|.++..++.|+...+.||+ .||++++..+.+
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHH
Confidence 34556788888888888888888887775 4679999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
++++.+.++++ ++++.+.++|++.|+..|.+++...++.+++.|+++ |+++
T Consensus 88 Fi~~n~l~alA-----------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~A 138 (394)
T COG2814 88 FIVSNLLSALA-----------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRA 138 (394)
T ss_pred HHHHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhH
Confidence 99999999988 568999999999999999999999999999999997 9999
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 187 FNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
.++...+..+...+|..++.++.+.+|||.+|++.+.+.++.++..+...|
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999999999988888877777666555
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.88 E-value=1.6e-21 Score=203.60 Aligned_cols=153 Identities=18% Similarity=0.287 Sum_probs=134.9
Q ss_pred HHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC
Q 008623 53 LVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRG 132 (559)
Q Consensus 53 l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (559)
...++.+++|.+..+.+++.+.+.+...++.++.|+++||+ |||+++..+.++..++...+.++
T Consensus 16 ~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 79 (399)
T TIGR00893 16 AAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA--------------- 79 (399)
T ss_pred hHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH---------------
Confidence 33457789999999999999999999999999999999999 99999999999888888887766
Q ss_pred CcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcccc
Q 008623 133 EETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNE 212 (559)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~ 212 (559)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+++++.+..
T Consensus 80 --------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~ 145 (399)
T TIGR00893 80 --------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHF 145 (399)
T ss_pred --------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhC
Confidence 357889999999999999999999999999999886 999999999999999999999999998889
Q ss_pred CchhhhHHHHHHHHHHHHHHHhc
Q 008623 213 GWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 213 g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
+|++.|.+.++..++..+..++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 146 SWQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred CchHHHHHHHHHHHHHHHHhhhe
Confidence 99999998876655554444433
No 29
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.88 E-value=8.4e-21 Score=198.45 Aligned_cols=169 Identities=11% Similarity=0.063 Sum_probs=134.0
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHH-HHHHHHHHHHHH
Q 008623 36 LGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAI-FSIIYVIGMTFL 114 (559)
Q Consensus 36 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~~~~~~ 114 (559)
++..++..++.....+.+|.|+++++|.+..+.+++.+.+.+...+..++.|+++||+ ||||.++. +.+...++.+..
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 3556777888888889999999999999999999999999999999999999999999 99887665 444445555555
Q ss_pred hhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc--hhhhhH
Q 008623 115 TVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF--FNWFYF 192 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~ 192 (559)
..+ ++.+.+++.|++.+.+.+...|...++..|..|+++ |.+. .+..+.
T Consensus 82 ~~~-----------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~ 132 (375)
T TIGR00899 82 AWN-----------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRA 132 (375)
T ss_pred Hhc-----------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHH
Confidence 544 346667778888887777777877788888876654 5443 567777
Q ss_pred HHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 193 SINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
..++|..++|.+++++.+..||++.|++.++..++..+..++
T Consensus 133 ~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 133 QISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999999998899999999888766555544443
No 30
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.88 E-value=1.5e-21 Score=203.19 Aligned_cols=157 Identities=16% Similarity=0.159 Sum_probs=131.7
Q ss_pred HHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 008623 46 YYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKP 125 (559)
Q Consensus 46 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (559)
.|... .+..++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.+...++
T Consensus 19 ~~~~~-~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~-------- 88 (377)
T TIGR00890 19 VYTWT-LLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA-------- 88 (377)
T ss_pred Hhhhh-hHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH--------
Confidence 44443 445677889999999999999999999999999999999998 99999999999999998888776
Q ss_pred CCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 126 VCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
.+.+.+++.|++.|++.+...+.....+.+++|++ |+++.++...+.++|..+++.+.
T Consensus 89 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~~~~ 146 (377)
T TIGR00890 89 ---------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFPDK-------RGLASGIIIGGYGLGSFILSPLI 146 (377)
T ss_pred ---------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCcc-------cHHHHHHHHHhcchhHhHHHHHH
Confidence 46788899999999999987777778888888743 89999999999999988877677
Q ss_pred hhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 206 VWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 206 ~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+.+.+..|||+.|.+.++..++..+..++
T Consensus 147 ~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 175 (377)
T TIGR00890 147 TSVINLEGVPAAFIYMGIIFLLVIVLGAF 175 (377)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 77777789999999888766555444433
No 31
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.88 E-value=2.6e-21 Score=207.56 Aligned_cols=166 Identities=13% Similarity=0.111 Sum_probs=140.0
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
++..++..++.....+.+...+|.+. +++|++..+.+++.+.+.+...++.++.|+++||+ |||+++.++.++..++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~ 102 (434)
T PRK11663 25 LITMYLGYALFYFTRKSFNAAMPEML-ADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGIIN 102 (434)
T ss_pred HHHHHHHHHHHHHhhhhHHHhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHHHH
Confidence 33444445555554455566676665 56999999999999999999999999999999999 99999999999988888
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
++..++ .+.+.+.+.|++.|++.|...+...+++.|++|+++ |++++++++
T Consensus 103 ~~~~~~-----------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~ 153 (434)
T PRK11663 103 ILFGFS-----------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWN 153 (434)
T ss_pred HHHHHH-----------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHH
Confidence 877765 457778888999999999888999999999999886 999999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHH
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIA 228 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~ 228 (559)
.+.++|..++|.+.+++.+..|||+.|++.++..++.
T Consensus 154 ~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 154 TAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999899999998877654443
No 32
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.88 E-value=6.4e-21 Score=208.39 Aligned_cols=182 Identities=15% Similarity=0.094 Sum_probs=133.7
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhh----cCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQ----LDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFS 104 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~----lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~ 104 (559)
++.+..+.+..+........+....+..-.+. .+.+..+.+++.+.+.++..++.++.|+++||+ |||++++++.
T Consensus 15 ~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~~~ 93 (502)
T TIGR00887 15 FRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGMEL 93 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHHHH
Confidence 34444444444544444444444444332221 244566778999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccc
Q 008623 105 IIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKS 184 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 184 (559)
++..++.++..++.. . ....+...++++|++.|++.|+..+....+++|.+|+++ |+
T Consensus 94 ~~~~v~~~~~~~~~~--~---------------~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg 150 (502)
T TIGR00887 94 IIMIIATVASGLSPG--S---------------SPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RG 150 (502)
T ss_pred HHHHHHHHHHHHccC--c---------------ccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HH
Confidence 988888877766411 0 001135679999999999999999999999999999997 99
Q ss_pred cchhhhhHHHhHHHHHHhhhhhhhcc-----------------------ccCchhhhHHHHHHHHHHHHHHHh
Q 008623 185 SFFNWFYFSINIGALIASSVLVWIQD-----------------------NEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 185 ~~~~~~~~~~~iG~~igp~i~~~l~~-----------------------~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
++.++.+....+|..+++.++.++.. ..+||+.|.+.++..++.++..++
T Consensus 151 ~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~ 223 (502)
T TIGR00887 151 AMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLT 223 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999887765421 237999998777665555444333
No 33
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.88 E-value=2.1e-21 Score=208.52 Aligned_cols=145 Identities=21% Similarity=0.353 Sum_probs=123.6
Q ss_pred ChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchh
Q 008623 64 SSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQS 143 (559)
Q Consensus 64 s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (559)
+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.++..... ...+.
T Consensus 69 ~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~ 127 (481)
T TIGR00879 69 SSSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAA--------------------FALSV 127 (481)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhc--------------------cccch
Confidence 388999999999999999999999999999 999999999999888888876541 11335
Q ss_pred HHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh---hhhccccCchhhhHH
Q 008623 144 ATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL---VWIQDNEGWGWGFGI 220 (559)
Q Consensus 144 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~---~~l~~~~g~~~~f~i 220 (559)
+.+++.|++.|++.+...+...++++|++|+++ |++++++++.+.++|..+++.++ +.+.+..+||++|.+
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~ 201 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGL 201 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHH
Confidence 678899999999999999999999999999887 99999999999999999999998 666677899999998
Q ss_pred HHHHHHHHHHHHHhc
Q 008623 221 PAVAMAIAVVSFFSG 235 (559)
Q Consensus 221 ~~~~~~i~~~~~~~~ 235 (559)
.++..++.++..++.
T Consensus 202 ~~~~~~~~~~~~~~l 216 (481)
T TIGR00879 202 QLIPAGLLFLGLFFL 216 (481)
T ss_pred HHHHHHHHHHHHhcC
Confidence 766555554444433
No 34
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.88 E-value=9.9e-21 Score=199.55 Aligned_cols=172 Identities=12% Similarity=0.143 Sum_probs=149.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+.++.+.+..++.....+...+.+|.+ ++++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTEL-AHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHH-HHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 456777788888888888888878765 578999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+++.++ ++.+.+++.|++.|++.+...+....++.|++|+++ |++.++.
T Consensus 81 ~~~l~~~~-----------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 131 (382)
T PRK10091 81 GNAMFTLS-----------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAG 131 (382)
T ss_pred HHHHHHHh-----------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHH
Confidence 88888766 458889999999999999888888888899998875 8999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
+..+..+|..++|.+++++.+..|||++|.+.++..++..+..
T Consensus 132 ~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 132 MVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998999999998887655554433
No 35
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=5.6e-21 Score=199.02 Aligned_cols=152 Identities=16% Similarity=0.197 Sum_probs=131.8
Q ss_pred HHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC
Q 008623 53 LVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRG 132 (559)
Q Consensus 53 l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (559)
...++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++.+++.++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 80 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--------------- 80 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---------------
Confidence 33467889999999999999999999999999999999999 99999999999988888888766
Q ss_pred CcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHh-hhhhhhccc
Q 008623 133 EETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIAS-SVLVWIQDN 211 (559)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp-~i~~~l~~~ 211 (559)
.+.+.+++.|++.|++.+...+...+++.|++|+++ |+++.++.+.+.++|..++| .+++.+.+.
T Consensus 81 --------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 146 (379)
T TIGR00881 81 --------TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAEL 146 (379)
T ss_pred --------hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhc
Confidence 357788899999999999999999999999999886 99999999999999999999 566777777
Q ss_pred cCchhhhHHHHHHHHHHHHHHHh
Q 008623 212 EGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 212 ~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
.+|++.|++.++..++..+..++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 147 YSWHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred CCchhHHHHHHHHHHHHHHHHhe
Confidence 89999998877655544443333
No 36
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.87 E-value=6.8e-21 Score=199.82 Aligned_cols=161 Identities=12% Similarity=0.105 Sum_probs=125.8
Q ss_pred HHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccC
Q 008623 42 ERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVS 121 (559)
Q Consensus 42 ~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 121 (559)
++..+..+.+.+|.. ++++|.+..+.+++.+.+.+++.++.++.|+++||+ |||++++........+.. ....
T Consensus 3 ~~~~~~~~~~~lp~i-~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~-~~~~---- 75 (368)
T TIGR00903 3 SQAIWVTFSPVLSLV-AEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAG-RLLD---- 75 (368)
T ss_pred hhHHHHHHHhhHHHH-HHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHH-HHHH----
Confidence 445555555666544 678999999999999999999999999999999999 999877655544444332 2111
Q ss_pred CCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHH
Q 008623 122 GLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIA 201 (559)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ig 201 (559)
..+...+++.|++.|++.+.. +......+|++|+++ |+++.++.+.+..+|..++
T Consensus 76 ------------------~~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~ 130 (368)
T TIGR00903 76 ------------------PFNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFA 130 (368)
T ss_pred ------------------hccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 035778999999999999864 555566689999876 9999999999999999999
Q ss_pred hhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 202 SSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 202 p~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+++++++.+..|||+.|++.++..++..+..++
T Consensus 131 ~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 131 LAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999866655554444333
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.87 E-value=1.4e-20 Score=197.43 Aligned_cols=176 Identities=13% Similarity=0.090 Sum_probs=146.4
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
++|.++.+....+....+.....+.+|. +.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~ 80 (385)
T TIGR00710 3 AKAFALLLGCLSILGPLGIDMYLPAFPE-IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIF 80 (385)
T ss_pred chHHHHHHHHHHHHHHHHHHHhcccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 3344444444555556666666666665 4678999999999999999999999999999999999 9999999999888
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+.+..+ .+.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+
T Consensus 81 ~~~~~~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 131 (385)
T TIGR00710 81 ALSSLGLALS-----------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIY 131 (385)
T ss_pred HHHHHHHHHH-----------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHH
Confidence 8888877665 457778899999999999999999999999999886 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
++.+...++|..++|.+++++.+..+|++.|.+.++..++..+..++
T Consensus 132 ~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 132 SILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998899999998877665555544443
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.87 E-value=1.2e-20 Score=204.43 Aligned_cols=154 Identities=16% Similarity=0.237 Sum_probs=122.9
Q ss_pred CCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhcc-CCCCCCCCCCCCCcccccCc
Q 008623 62 DQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASV-SGLKPVCHGPRGEETCQVTD 140 (559)
Q Consensus 62 g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 140 (559)
|.+..+.+++.+.+.++..++++++|+++||+ ||||+++.+.++++++.+..++.... .... ..+.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~------------~~~~ 117 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSLKIAAVLFFISALGSAWPEFGFTSIG------------PDNT 117 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHhhcccccccc------------ccch
Confidence 88889999999999999999999999999999 99999999999888887776643100 0000 0111
Q ss_pred chhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhc--------ccc
Q 008623 141 AQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQ--------DNE 212 (559)
Q Consensus 141 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~--------~~~ 212 (559)
.....+++.|++.|++.|...+...++++|++|+++ |++++++.+.+..+|..+++.+++.+. +..
T Consensus 118 ~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~ 191 (479)
T PRK10077 118 GYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTD 191 (479)
T ss_pred hHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccC
Confidence 335678899999999999999999999999999987 999999999999999999887665442 456
Q ss_pred CchhhhHHHHHHHHHHHHHHHh
Q 008623 213 GWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 213 g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
|||++|++.++..++.++..++
T Consensus 192 gWr~~f~~~~~~~~~~~~~~~~ 213 (479)
T PRK10077 192 GWRYMFASEAIPALLFLMLLYF 213 (479)
T ss_pred ChHHHHHHHHHHHHHHHHHHHc
Confidence 8999999887666655544433
No 39
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.87 E-value=3.3e-21 Score=208.74 Aligned_cols=152 Identities=15% Similarity=0.089 Sum_probs=125.8
Q ss_pred HHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 008623 54 VRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGE 133 (559)
Q Consensus 54 ~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (559)
...+.+++|.+..+.+++.+.+.+++.++.+++|+++||+ |||+++..+.++..++.+..+....
T Consensus 52 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------- 116 (467)
T PRK09556 52 QNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSAICMLGFGASLG-------------- 116 (467)
T ss_pred hHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHHHHHHHHHHHHh--------------
Confidence 3456789999999999999999999999999999999999 9999999888877776666554311
Q ss_pred cccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcccc-
Q 008623 134 ETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNE- 212 (559)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~- 212 (559)
....+.+.+++.|++.|++.+...|...++++|++|+++ |+++++++..+.++|..+++.+..++.+..
T Consensus 117 ----~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~ 186 (467)
T PRK09556 117 ----SGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNISHNLGGAGAGGVALWGANYFF 186 (467)
T ss_pred ----cccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeecccchhhhHHHHHHHHHHHhhc
Confidence 011467889999999999999999999999999999987 999999999999999999998887766543
Q ss_pred --CchhhhHHHHHHHHHHHH
Q 008623 213 --GWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 213 --g~~~~f~i~~~~~~i~~~ 230 (559)
+|+..|.+.++..++..+
T Consensus 187 ~~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 187 DGHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred cCcchhHHHHHHHHHHHHHH
Confidence 588888876665544433
No 40
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.87 E-value=2.9e-20 Score=191.19 Aligned_cols=323 Identities=19% Similarity=0.247 Sum_probs=238.4
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMT 112 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 112 (559)
+.+....++.....+...+.++.|.+ ++|.+..+.+++.+...+...++.++.|+++||+ |||+.+..+.++..++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 34566777888888888888888875 6799999999999999999999999999999999 999999999999888888
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
...+. ++.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+.
T Consensus 80 ~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 130 (352)
T cd06174 80 LLAFA-----------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSA 130 (352)
T ss_pred HHHHh-----------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHH
Confidence 87765 357788899999999999999999999999999986 9999999999
Q ss_pred HHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccc
Q 008623 193 SINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKS 272 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (559)
..++|..++|.+++.+.+..+|++.+.+.++..++..+...+.. +.
T Consensus 131 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~--------------------- 176 (352)
T cd06174 131 GFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------RL--------------------- 176 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------HH---------------------
Confidence 99999999999999999988999999888776665554433321 00
Q ss_pred hhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHH-HHHHHHHHHHhcc
Q 008623 273 LLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPI-WATGIIFSAVYSQ 351 (559)
Q Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~ 351 (559)
+...... .............
T Consensus 177 -----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~ 197 (352)
T cd06174 177 -----------------------------------------------------------LLLLALAFFLLSFGYYGLLTY 197 (352)
T ss_pred -----------------------------------------------------------HHHHHHHHHHHHhHHHHHHHH
Confidence 0000000 1111111111111
Q ss_pred cchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhH-HHHHHHHHHHHHHH
Q 008623 352 MSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQ-RMGIGLFISILSMI 430 (559)
Q Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~-~~~~G~~~~~i~~l 430 (559)
.+...... . +.. ....+.......+..++..++..+ +.+|.++| + .+..+..+..++.+
T Consensus 198 ~~~~~~~~-~----~~~----~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~-------~~~~~~~~~~~~i~~~ 257 (352)
T cd06174 198 LPLYLQEV-L----GLS----AAEAGLLLSLFGLGGILGALLGGL----LSDRLGRR-------RLLLLIGLLLAALGLL 257 (352)
T ss_pred HHHHHHHh-c----CCC----HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhh-------hHHHHHHHHHHHHHHH
Confidence 11111110 0 101 011122333444555555555554 45554433 3 56677777777776
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHh
Q 008623 431 AAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLS 510 (559)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 510 (559)
.....+ +.+...+..++.+++.+...+...+++.|..|++.|++.+|+.+...++++.++
T Consensus 258 ~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 317 (352)
T cd06174 258 LLALAP--------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALG 317 (352)
T ss_pred HHHHhc--------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 665432 345667778899999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhh
Q 008623 511 SLLVTIVTS 519 (559)
Q Consensus 511 ~~l~~~v~~ 519 (559)
+.+.+.+.+
T Consensus 318 ~~i~g~l~~ 326 (352)
T cd06174 318 PLLAGLLLD 326 (352)
T ss_pred HHHHHHHhc
Confidence 999999875
No 41
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.87 E-value=3.6e-20 Score=196.17 Aligned_cols=160 Identities=16% Similarity=0.133 Sum_probs=134.6
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhh
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTV 116 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 116 (559)
+.....+..++.+.+.+| .+++++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+++.+.+++
T Consensus 16 ~~~~~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~ 93 (393)
T PRK09705 16 LIGLNMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMREL 93 (393)
T ss_pred HHHHHcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHH
Confidence 334444444455666666 45679999999999999999999999999999999999 9999999999999999999987
Q ss_pred hhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhH
Q 008623 117 TASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINI 196 (559)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 196 (559)
+ ++++.++++|++.|++.+...+....++.|++| ++ |+++++.+..+.++
T Consensus 94 a-----------------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~ 143 (393)
T PRK09705 94 Y-----------------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMG 143 (393)
T ss_pred C-----------------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHH
Confidence 7 456778899999999999999999999999987 44 89999999999999
Q ss_pred HHHHHhhhhhhhcccc-CchhhhHHHHHHHHHH
Q 008623 197 GALIASSVLVWIQDNE-GWGWGFGIPAVAMAIA 228 (559)
Q Consensus 197 G~~igp~i~~~l~~~~-g~~~~f~i~~~~~~i~ 228 (559)
|..+++.+++++.++. +||+.+.+.++..++.
T Consensus 144 g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~ 176 (393)
T PRK09705 144 GGGLGAAITPWLVQHSETWYQTLAWWALPAVVA 176 (393)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 9999999999888775 7998877655443333
No 42
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.87 E-value=2.2e-20 Score=198.29 Aligned_cols=159 Identities=11% Similarity=0.102 Sum_probs=132.9
Q ss_pred HHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 008623 45 AYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLK 124 (559)
Q Consensus 45 ~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (559)
....+.+.++. +.+++|.+..+.++..+.+.++..++.++.|+++||+ ||||+++.+.++..++.+....+
T Consensus 28 ~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~------- 98 (406)
T PRK15402 28 ANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILLA------- 98 (406)
T ss_pred hhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHH-------
Confidence 44445555655 4578999999999999999999999999999999999 99999999988888887777655
Q ss_pred CCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhh
Q 008623 125 PVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSV 204 (559)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i 204 (559)
++.+.+++.|++.|++.+...+...+++.|.+|+++ |.+..++.+....+|..++|.+
T Consensus 99 ----------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~i 156 (406)
T PRK15402 99 ----------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLLGPLV 156 (406)
T ss_pred ----------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 346778889999999999888888899999999876 8888888888888999999999
Q ss_pred hhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 205 LVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 205 ~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
++++.+..+|+++|++.++..++..+..+.
T Consensus 157 ~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~ 186 (406)
T PRK15402 157 GAALIHVLPWRGMFVLFAALAALSFFGLWR 186 (406)
T ss_pred HHHHHHccCccHHHHHHHHHHHHHHHHHHH
Confidence 999988889999998877766655544333
No 43
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.87 E-value=4e-20 Score=196.37 Aligned_cols=170 Identities=14% Similarity=0.049 Sum_probs=140.2
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
.+.||++....++.++...+.+....+++.|+ +++|.+..+.+++.+.+.++..++.++.|+++||+ ||||++..+.+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~ 86 (402)
T TIGR00897 9 IGIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLL 86 (402)
T ss_pred cCCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHH
Confidence 45677888888888888888888888899888 57899999999999999999999999999999999 99999999998
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+..++.+.+..... ...+.+.+++.|++.|++.+...+...+.+.+.+|+++ |++
T Consensus 87 ~~~~~~~~~~~~~~-------------------~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~ 141 (402)
T TIGR00897 87 LWCVGHAAFIVFGL-------------------GHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSS 141 (402)
T ss_pred HHHHHHHHHHHHhc-------------------cCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHH
Confidence 88877655432100 01246677788999999988777777788889988886 999
Q ss_pred chhhhhHHHhHHH-HHHhhhhhhhccccCchhhhHHHH
Q 008623 186 FFNWFYFSINIGA-LIASSVLVWIQDNEGWGWGFGIPA 222 (559)
Q Consensus 186 ~~~~~~~~~~iG~-~igp~i~~~l~~~~g~~~~f~i~~ 222 (559)
+.++++.+.++|. .++|.+++++.+..||+..++...
T Consensus 142 ~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~ 179 (402)
T TIGR00897 142 AVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSAL 179 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 9999999999996 589999999988888765555443
No 44
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=4.8e-20 Score=194.19 Aligned_cols=156 Identities=10% Similarity=0.071 Sum_probs=136.5
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
.|.++.+++..++.......+.+.+|.|.+ ++|.|..+.|++.+.+.++..+++++.|+++||+ |||+++..+.++..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 345788888888999888888899998886 6899999999999999999999999999999999 99999999999988
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.....++ ++.+.+.+.|++.|++.+...+...+.+.+..++++ |++.++
T Consensus 83 ~~~~~~~~~-----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 133 (381)
T PRK03633 83 AGCAGLGLM-----------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLA 133 (381)
T ss_pred HHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 888877765 457888899999999999888887777788888775 899999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCch
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWG 215 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~ 215 (559)
+++.+.++|..+||.+++.+.+...+.
T Consensus 134 ~~~~~~~~g~~~g~~~~~~l~~~~~~~ 160 (381)
T PRK03633 134 AYMMVYYLGTVLGQLLVSKVSTELMSV 160 (381)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccch
Confidence 999999999999999999887654333
No 45
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.86 E-value=2.1e-20 Score=199.58 Aligned_cols=165 Identities=15% Similarity=0.179 Sum_probs=140.9
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
+++.+....+..+...+..+.... +..++++++|.++.+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLIFY-IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHH-HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 344455555555655565555544 44466789999999999999999999999999999999998 9999999999999
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+...++ .+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.
T Consensus 94 ~~~~~~~~~~-----------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~ 144 (426)
T PRK12307 94 SVGTGLSGLA-----------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKAS 144 (426)
T ss_pred HHHHHHHHHH-----------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhh
Confidence 9988887776 457889999999999999999999999999999886 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAV 223 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~ 223 (559)
++++.+.++|..+++.+.+.+.+..||++.|++.+.
T Consensus 145 ~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~ 180 (426)
T PRK12307 145 AFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLL 180 (426)
T ss_pred hHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHH
Confidence 999999999999999999999888999999987554
No 46
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.86 E-value=6.5e-21 Score=205.79 Aligned_cols=149 Identities=11% Similarity=0.044 Sum_probs=123.4
Q ss_pred HHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcc
Q 008623 56 YFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEET 135 (559)
Q Consensus 56 yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (559)
.+.+++|.+.++.+++.+.+.+...++.++.|+++||+ |||++++.+.++..++.+.++++
T Consensus 44 ~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~------------------ 104 (455)
T TIGR00892 44 ELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS------------------ 104 (455)
T ss_pred HHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh------------------
Confidence 45678999999999999999999999999999999998 99999999998888887777665
Q ss_pred cccCcchhHHHHH-HHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCc
Q 008623 136 CQVTDAQSATFFV-ALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGW 214 (559)
Q Consensus 136 ~~~~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~ 214 (559)
.+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++++.+..||
T Consensus 105 -----~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gw 172 (455)
T TIGR00892 105 -----SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGW 172 (455)
T ss_pred -----hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhCh
Confidence 23454543 4678899988766666778888886 44 89999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHhc
Q 008623 215 GWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 215 ~~~f~i~~~~~~i~~~~~~~~ 235 (559)
|++|++.+++.+++.+..++.
T Consensus 173 r~~f~~~~~~~~~~~v~~~~~ 193 (455)
T TIGR00892 173 RGSFLILGGLLLHCCVCGALM 193 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999998887666555444443
No 47
>PRK03699 putative transporter; Provisional
Probab=99.86 E-value=1e-19 Score=192.58 Aligned_cols=173 Identities=9% Similarity=0.086 Sum_probs=142.7
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
++|..+..++..++.....+.+...+|. +.+++|.|..+.+++.+.+.++..++.+++|+++||+ |||++++.+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~~ 82 (394)
T PRK03699 5 RIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFALM 82 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHH
Confidence 4455666666777666666666666665 5678999999999999999999999999999999999 9999999999888
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
+++.+++.++ ++.+.+.+.|++.|++.+...+...+++.|.+|+++ |++..
T Consensus 83 ~i~~~l~~~~-----------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~ 133 (394)
T PRK03699 83 ILAVAGLMFS-----------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRL 133 (394)
T ss_pred HHHHHHHHHc-----------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHH
Confidence 8888877665 457778899999999999888889999999998876 89998
Q ss_pred hhhhHHHhHHHHHHhhhhhhhcc-ccCchhhhHHHHHHHHHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQD-NEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~-~~g~~~~f~i~~~~~~i~~~~ 231 (559)
+..+...++|+.++|.+.+++.+ ..|||++|.+.++..++..+.
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 134 LFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 88888889999999998887754 578999998777655544433
No 48
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.86 E-value=3.8e-20 Score=199.62 Aligned_cols=171 Identities=16% Similarity=0.099 Sum_probs=129.0
Q ss_pred HhhHHHHHHHHHHhh---hhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 35 ILGNECCERLAYYGM---STNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 35 ~~~~~~~~~~~~~~~---~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
++...++.....|.. ......|+.++ |.+..+.+++.+.+.+...++.+++|+++||+ |||++++.+.++.+++.
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~~ 107 (452)
T PRK11273 30 IFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAVM 107 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHHH
Confidence 333344444444433 23344567777 99999999999999999999999999999999 99999999998888888
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+.+.+... ...+.+.+++.|++.|++.+...+.....+.|++|+++ |++++++++
T Consensus 108 ~~~~~~~~-------------------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 162 (452)
T PRK11273 108 LFMGFVPW-------------------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWN 162 (452)
T ss_pred HHHHhhhc-------------------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHH
Confidence 77765410 01246677888999999999888888888999999886 999999999
Q ss_pred HHHhHHHH-HHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 192 FSINIGAL-IASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 192 ~~~~iG~~-igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
.+.++|+. ++|+++..+....||+++|++.++..++..+..
T Consensus 163 ~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 163 CAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred HHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999874 456544333334589999998776555543333
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.86 E-value=1.5e-19 Score=193.75 Aligned_cols=169 Identities=20% Similarity=0.237 Sum_probs=122.5
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcC---CChhhhHH---HHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLD---QSSSTASK---NVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~---~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
+..+++...... .+.+..++.++++ .+..+.+. +.+...++..++.+++|+++||+ ||||++..+.+++.++
T Consensus 29 ~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~~~~~~~ 106 (432)
T PRK10406 29 SGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISVCMMCFG 106 (432)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 334444444443 4556667888874 44444333 33444455558999999999999 9999999999999999
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+.++++ |++.. .....+..+.+.|+++|++.|+..|...++++|++|+++ |+++.++.
T Consensus 107 ~~~~~~~---~~~~~------------~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~~~ 165 (432)
T PRK10406 107 SLVIACL---PGYET------------IGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYASFQ 165 (432)
T ss_pred HHHHhhc---CCchh------------HHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHHHH
Confidence 9888765 21000 000124568899999999999999999999999999987 99999988
Q ss_pred hHHHhHHHHHHhhhhhhhc--------cccCchhhhHHHHHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQ--------DNEGWGWGFGIPAVAMAIA 228 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~--------~~~g~~~~f~i~~~~~~i~ 228 (559)
+.+.+.|..+++.+...+. +.+|||++|++.++..++.
T Consensus 166 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 166 YVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 8888888888876654443 2579999999877654443
No 50
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.86 E-value=1.6e-19 Score=191.20 Aligned_cols=174 Identities=9% Similarity=0.068 Sum_probs=124.2
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHH-HHHhhhHHHHHhHhccchhHHHHH-HHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGT-CYITPLIGAFLADAYLGRYWTIAI-FSIIYVI 109 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~-~~~~~~~~G~laDr~~Grr~~~~~-~~~~~~~ 109 (559)
.+..++..++..++...+.+.++.|+.+++|.+.++.|.+.+...+. ..++++++|+ +||+ ||||.++. +.++..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~~~~ 94 (393)
T PRK15011 17 STAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLLGVL 94 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHHHHH
Confidence 46777788999999998999999999999999999999998766554 4455555566 9999 99987654 4444445
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccc--cch
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKS--SFF 187 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~--~~~ 187 (559)
+.....++ .+.+.+++.+.+.+...+...|....+..|..++++ |. ...
T Consensus 95 ~~~~~~~~-----------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 145 (393)
T PRK15011 95 ACTLFAWN-----------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------REAVMFS 145 (393)
T ss_pred HHHHHHHh-----------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------chHHHHH
Confidence 55554444 345555444444333344556777777777666543 32 334
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
++.+.+.++|..+||.+++++.+..|||.+|++.++..++..+..+...
T Consensus 146 ~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 194 (393)
T PRK15011 146 SFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFL 194 (393)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhc
Confidence 6788889999999999999999989999999988766555544444333
No 51
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.85 E-value=2e-19 Score=190.55 Aligned_cols=164 Identities=12% Similarity=0.082 Sum_probs=134.9
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++.++...++..++...+...++.. .+++|.+..+.+++.+.+.+...++.|++|+++||+ ||||+++.+.++.++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 346667777888777666555555544 578899999999999999999999999999999999 999999999998888
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+.+... .+ .++.|+++|++.+...|...+++.|++|+++ |+++.++
T Consensus 81 ~~~~~~~~-----------------------~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~ 128 (393)
T PRK11195 81 GCLLMLFG-----------------------IH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGW 128 (393)
T ss_pred HHHHHHHH-----------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHH
Confidence 77766543 12 2677899999999999999999999999887 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIA 228 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~ 228 (559)
.+...++|..+||.++|++.+. .|+.++.+.+...+++
T Consensus 129 ~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~ 166 (393)
T PRK11195 129 MEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA 166 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 3666666555443333
No 52
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.85 E-value=5.3e-20 Score=200.49 Aligned_cols=168 Identities=17% Similarity=0.241 Sum_probs=142.6
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
.+|+.+..+.+..++..+........+ .++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 345555566666666666655555444 456788999999999999999999999999999999999 999999999988
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..++.+.+.+. .+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++
T Consensus 95 ~~~~~~~~~~~-----------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~ 145 (496)
T PRK03893 95 FSVGTLACGFA-----------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKA 145 (496)
T ss_pred HHHHHHHHHHH-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHH
Confidence 88888877765 457788999999999999999999999999999886 9999
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHH
Q 008623 187 FNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAM 225 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~ 225 (559)
.++.+.+.++|..++|.+.+++.+..+|++.|.+.++..
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999988755433
No 53
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.85 E-value=9.1e-20 Score=192.76 Aligned_cols=173 Identities=13% Similarity=0.085 Sum_probs=143.3
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
+.+|.++.+....++.........+.+|.+ .+++|.++.+.+++.+.+.+...++.++.|+++||+ |||++++.+.++
T Consensus 5 ~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~ 82 (394)
T PRK11652 5 RNVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSI 82 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHH
Confidence 345666666677777777777666777655 478999999999999999999999999999999999 999999999988
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..++.+..... .+.+.+++.|++.|++.+...+....+..|.+++++ ++++
T Consensus 83 ~~~~~~~~~~~-----------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~ 133 (394)
T PRK11652 83 FILGTLVALFA-----------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHA 133 (394)
T ss_pred HHHHHHHHHHH-----------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHH
Confidence 88887777654 346778899999999988777777778888887765 8888
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHH
Q 008623 187 FNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 230 (559)
.++.+.+..++..++|.+++++.+..||+++|++.++..++..+
T Consensus 134 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 134 NSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999888999999987765544433
No 54
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.84 E-value=6e-19 Score=186.06 Aligned_cols=344 Identities=11% Similarity=-0.010 Sum_probs=216.8
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH-HHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII-YVIGM 111 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~-~~~~~ 111 (559)
+.+....++...++....+++|.|++ ++|.|..+.+++.+.+.+...+++++.|.++||+ ||++.......+ ..+..
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAIFA 84 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHH
Confidence 44556666666766777899999995 6899999999999999999999999999999998 985433222211 11111
Q ss_pred H-HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 112 T-FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 112 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
+ ....+ ++.+.+++.|.+.+.+.+...|...++..+. ++ +|++.++..
T Consensus 85 ~~~~~~~-----------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~------~~~~~~g~~ 133 (382)
T TIGR00902 85 AAFSAGA-----------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QK------QFGLDYGKV 133 (382)
T ss_pred HHHHHhh-----------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HH------HcCCCccHH
Confidence 1 11122 4577888889989988888888877776543 23 388999999
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCc
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPAD 270 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (559)
....++|..++|.+++++.+..||+..|.+.+...++.++ .+...++. ++++++..+
T Consensus 134 ~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~------------------- 190 (382)
T TIGR00902 134 RLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTI---PPKDAIPED------------------- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCC---CCCcccccc-------------------
Confidence 9999999999999999999999999998876544332222 22222111 111000000
Q ss_pred cchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008623 271 KSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYS 350 (559)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 350 (559)
+ .+ ..+ ...++.+.|++...+ +...+......
T Consensus 191 ----------~-----------~~----------------------~~~--~~~~~l~~~~~~~~l---~~~~l~~~~~~ 222 (382)
T TIGR00902 191 ----------E-----------SQ----------------------GDS--AFIALLKNPMNLRFL---AAVCLIQGAHA 222 (382)
T ss_pred ----------c-----------cc----------------------cch--hHHHHHcChHHHHHH---HHHHHHHHHHH
Confidence 0 00 000 000111122222221 11222222233
Q ss_pred ccchhhhhccccccCCCCCccceeCccc---cccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHH
Q 008623 351 QMSSLFVLQGERMDTHVGNSSFKIPPAS---LSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISIL 427 (559)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i 427 (559)
++.+.... ++++ .| .++.. ...+..+..++..++. +|+.+| ++.++.+.+|.++.++
T Consensus 223 ~~~~~~~~---~l~~-~g-----~s~~~~g~l~~~~~~~~i~~~~~~--------~~l~~r---~g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 223 AYYGFSAI---YWQA-AG-----ISASATGLLWGIGVLAEIIIFAFS--------NKLFQN---CSARDLLLISAIACVG 282 (382)
T ss_pred HHHHHHHH---HHHH-CC-----CCHhHHHHHHHHHHHHHHHHHHHh--------HHHHhh---CCHHHHHHHHHHHHHH
Confidence 33332221 1111 23 22211 2222333333333333 333333 5666778888888888
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHH-HHHHHH
Q 008623 428 SMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSL-TTVALG 506 (559)
Q Consensus 428 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg 506 (559)
.+..++..+ +.+.+.+..++.++..++..+....++.+. |++.+++++++++ +..++|
T Consensus 283 ~~~~~~~~~--------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g 341 (382)
T TIGR00902 283 RWAIIGAIE--------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGL 341 (382)
T ss_pred HHHHHHhHh--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHH
Confidence 887776532 445566667999999999999999999988 9999999999987 578899
Q ss_pred HHHhhHHHHHhhhhh
Q 008623 507 NYLSSLLVTIVTSIS 521 (559)
Q Consensus 507 ~~lg~~l~~~v~~~~ 521 (559)
..+++.+.|.+.+..
T Consensus 342 ~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 342 IAIFTAFAGFIYPTL 356 (382)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998753
No 55
>PRK09952 shikimate transporter; Provisional
Probab=99.84 E-value=3.8e-19 Score=191.08 Aligned_cols=176 Identities=11% Similarity=0.081 Sum_probs=125.1
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhc--CCChhhhHHHH-----HHHHHHHHHhhhHHHHHhHhccchhHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQL--DQSSSTASKNV-----LDWSGTCYITPLIGAFLADAYLGRYWTI 100 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g~s~~~~~~~~-----~~~~~~~~~~~~~~G~laDr~~Grr~~~ 100 (559)
++|..+...+..+++......+....+.++.+++ +.++. .+.+. +...++..++.++.|+++||+ |||+++
T Consensus 20 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~l 97 (438)
T PRK09952 20 ARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRML 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHHH
Confidence 3455555555555555555544444555666655 56655 34433 233445667788889999999 999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhh
Q 008623 101 AIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEK 180 (559)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 180 (559)
..+.+++.++.++++++.+... ........+++.|+++|++.|+..+....++.|++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~---- 158 (438)
T PRK09952 98 MLTVWMMGIATALIGLLPSFST---------------IGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK---- 158 (438)
T ss_pred HHHHHHHHHHHHHHhcCCcHHH---------------HHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC----
Confidence 9999999999888887621000 000012357889999999999999999999999999986
Q ss_pred hccccchhhhhHHHhHHHHHHhhhhhhhc--------cccCchhhhHHHHHHHH
Q 008623 181 KHKSSFFNWFYFSINIGALIASSVLVWIQ--------DNEGWGWGFGIPAVAMA 226 (559)
Q Consensus 181 ~~r~~~~~~~~~~~~iG~~igp~i~~~l~--------~~~g~~~~f~i~~~~~~ 226 (559)
|++..+..+.+..+|..+++.+..++. +.+|||++|++.++..+
T Consensus 159 --rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 159 --KAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 999988888888899888877666554 35799999998776543
No 56
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.84 E-value=6.7e-20 Score=191.14 Aligned_cols=159 Identities=17% Similarity=0.189 Sum_probs=135.1
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.+|..++..+......+.+.+++|.++++++|.+..+.+++.+.+.++..++.++.|+++||+ |||++++.+.++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456777788888888888888898889999999999999999999999999999999999999 9999999999999988
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcc-hhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDA-QSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
.+.+.++ . +.+.+++.|++.|++.+.. +...++++|++|+++ |++..++
T Consensus 81 ~~~~~~~-----------------------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~------r~~~~~~ 130 (366)
T TIGR00886 81 CLWAGLA-----------------------VQSYSVLLLLRLFIGIAGGSF-ASCMPWISFFFPKKI------QGTALGL 130 (366)
T ss_pred HHHHHHH-----------------------hhhHHHHHHHHHHHHHhchhh-HhHHHHHHHhcCHhh------hhHHHHH
Confidence 8887766 3 5778889999999986654 556789999999887 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhcc----------ccCchhhhHH
Q 008623 190 FYFSINIGALIASSVLVWIQD----------NEGWGWGFGI 220 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~----------~~g~~~~f~i 220 (559)
+....++|..+++.+++.+.. ..+|++.|++
T Consensus 131 ~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 131 AAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 888888888887777665543 3479999843
No 57
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.84 E-value=8.5e-20 Score=197.47 Aligned_cols=147 Identities=14% Similarity=0.172 Sum_probs=127.2
Q ss_pred hcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccC
Q 008623 60 QLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVT 139 (559)
Q Consensus 60 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (559)
++|++..+.|.+.+.+.+++.++.+++|+++||+ |||+++..+.++..++.++..+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-------------------- 128 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-------------------- 128 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH--------------------
Confidence 6889999999999999999999999999999998 9999999999887777766644311
Q ss_pred cchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcccc-Cchhhh
Q 008623 140 DAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNE-GWGWGF 218 (559)
Q Consensus 140 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~-g~~~~f 218 (559)
.+.+.+++.|++.|++.+...|....+++|++|+++ |+++.++.+.+.++|..++|.+++++.+.. ||+++|
T Consensus 129 -~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f 201 (465)
T TIGR00894 129 -GGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIF 201 (465)
T ss_pred -cCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeeh
Confidence 235668889999999999999999999999999987 999999999999999999999999998884 999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 008623 219 GIPAVAMAIAVVSFFS 234 (559)
Q Consensus 219 ~i~~~~~~i~~~~~~~ 234 (559)
++.++..++..+..+.
T Consensus 202 ~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 202 YVFGIVGCAWSLLWFV 217 (465)
T ss_pred hhhhHHHHHHHHHHHH
Confidence 9888766555444433
No 58
>PRK11043 putative transporter; Provisional
Probab=99.84 E-value=2.6e-19 Score=189.74 Aligned_cols=163 Identities=15% Similarity=0.219 Sum_probs=133.1
Q ss_pred HHHHHHhhhhhHHHH--HhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhc
Q 008623 42 ERLAYYGMSTNLVRY--FKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTAS 119 (559)
Q Consensus 42 ~~~~~~~~~~~l~~y--l~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 119 (559)
...++++...++|.+ +++++|.+..+.+++.+.+.+...++.+++|+++||+ |||+++..+.++..++.+...+.
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~-- 91 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV-- 91 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh--
Confidence 333444444444433 5678999999999999999999999999999999999 99999999988888877777655
Q ss_pred cCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHH
Q 008623 120 VSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGAL 199 (559)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ 199 (559)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ +.+.++..+...++|..
T Consensus 92 ---------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 144 (401)
T PRK11043 92 ---------------------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPA 144 (401)
T ss_pred ---------------------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHH
Confidence 357778889999999988777777888999999875 78888888888899999
Q ss_pred HHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 200 IASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 200 igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
++|.+++++.+..||++.|++.++..++..+..+.
T Consensus 145 ~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 145 LAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998887666555444433
No 59
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.84 E-value=2e-19 Score=191.60 Aligned_cols=180 Identities=14% Similarity=0.020 Sum_probs=133.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++...+..+......+.+.+..+..-++++|+|.+|.+++.+.+.+.+.++.++.|++.||+ |.|+++.++.++..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHH
Confidence 6677666665555555555555444444448999999999999999999999999999999999 999999999998888
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
.++.++++.. ...++++.+++.|++.|++ +...+.....+++++|+++ |+++.++
T Consensus 113 ~~~~~~~a~~------------------~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi 167 (462)
T PRK15034 113 PCVWLGIAVQ------------------NPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGI 167 (462)
T ss_pred HHHHHHHHHc------------------ccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHH
Confidence 8887776411 1114578899999999998 6677889999999999987 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhc-----c-------------ccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 190 FYFSINIGALIASSVLVWIQ-----D-------------NEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~-----~-------------~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
.....++|..+++++...+. . ..+|+.++++..+..++..+..++.
T Consensus 168 ~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 168 NGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 86666777765554443321 2 2236666666666555555555544
No 60
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.84 E-value=4.5e-20 Score=197.56 Aligned_cols=348 Identities=18% Similarity=0.184 Sum_probs=231.4
Q ss_pred hhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccccc
Q 008623 59 HQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQV 138 (559)
Q Consensus 59 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (559)
.+++.++.+.+++.+.+..+..++...+|+++||+ |-|+++..+.++.+++.++..++..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~------------------- 125 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAAS------------------- 125 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 36788999999999999999999999999999999 9999999999999999999988742
Q ss_pred CcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc-cCchhh
Q 008623 139 TDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN-EGWGWG 217 (559)
Q Consensus 139 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~-~g~~~~ 217 (559)
.+.+.+++.|+++|++.|...|+...+.+++.|++| |++..++.+.+.++|.+++..++|++.+. .||+++
T Consensus 126 --~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~si 197 (466)
T KOG2532|consen 126 --IGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSI 197 (466)
T ss_pred --hcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchH
Confidence 234467899999999999999999999999999998 99999999999999999999999999998 999999
Q ss_pred hHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccc
Q 008623 218 FGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFS 297 (559)
Q Consensus 218 f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 297 (559)
|++.++..++..++++...+. .|.+.+.. .+++....+.++.++
T Consensus 198 fY~~g~~g~i~~~~w~~~~~d----~P~~h~~i-----------------s~~El~~I~~~k~~~--------------- 241 (466)
T KOG2532|consen 198 FYVFGIVGLIWFILWFLFYSD----SPSKHPNI-----------------SEKELKYIEKGKSEA--------------- 241 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhcC----CcccCCCC-----------------CHHHHHHHHhccccc---------------
Confidence 999998776666555444332 11111100 000000011111100
Q ss_pred hhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCcccee-Cc
Q 008623 298 FFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKI-PP 376 (559)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~ 376 (559)
+..+ +...|| |.+++..+++......+.-.........+.+.++.+.++ +++ ..
T Consensus 242 ---------~~~~--~~~vP~-----------~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~---f~v~~~ 296 (466)
T KOG2532|consen 242 ---------HVKK--KPPVPY-----------KAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLG---FDVRET 296 (466)
T ss_pred ---------ccCC--CCCCCH-----------HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhC---CChhhh
Confidence 0000 023456 345554555555544444444444445555555555444 333 45
Q ss_pred cccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHH--HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCc
Q 008623 377 ASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRM--GIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEM 454 (559)
Q Consensus 377 ~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~--~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~ 454 (559)
+.+++++.+...+...+.+.+.|.+.+| .-+ .+..+|+ .+++...++.++.+++....
T Consensus 297 G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~~~---------------- 356 (466)
T KOG2532|consen 297 GFLSALPFLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTSDE---------------- 356 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecCCC----------------
Confidence 5677777776666666666665555555 222 3334455 35666666666666654210
Q ss_pred cchhHHHHHHHHHHHHHHHH-HhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 455 PMSIMWQVPQYFLIGCAEVF-TFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 455 ~~~~~~~~~~~~l~~~~~~~-~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
.. +..+.....+.+..+ ..+..+.-..+.+| ++-+..+|+.+....+++.++|++++.+.+
T Consensus 357 --~~-~~a~~~l~~~~~~~g~~~~Gf~~~~~~~ap-q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~ 418 (466)
T KOG2532|consen 357 --HR-LLAVILLTIAIGLSGFNISGFYKNHQDIAP-QHAGFVMGIINFVGALAGFIAPLLVGIIVT 418 (466)
T ss_pred --cc-hHHHHHHHHHHHHcccchhhhHhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHheeeEeC
Confidence 11 122222222222222 22333333334465 669999999999999999999999999874
No 61
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.84 E-value=5.7e-19 Score=192.46 Aligned_cols=176 Identities=17% Similarity=0.118 Sum_probs=126.3
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhh-hHH-----HHHHHHHHHHHhhhHHHHHhHhccchhHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSST-ASK-----NVLDWSGTCYITPLIGAFLADAYLGRYWTIAI 102 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-~~~-----~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~ 102 (559)
++.+....+..+++..-+.. ..+...++.++++.+..+ ..+ +.+...++..++.++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 34444445555555544443 344556778888654422 122 24666788889999999999999 99999999
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc
Q 008623 103 FSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (559)
+.+++.++.++++++.+... ..-..+..+.+.|+++|++.|+..+...++++|++|+++
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~---------------~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------ 151 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYAT---------------IGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------ 151 (490)
T ss_pred HHHHHHHHHHHHHhcccHHH---------------HHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------
Confidence 99999999999887621000 000011247899999999999999999999999999987
Q ss_pred cccchhhhhHHHhHHHHHHhhhhhhhc--------cccCchhhhHHHHHHHHH
Q 008623 183 KSSFFNWFYFSINIGALIASSVLVWIQ--------DNEGWGWGFGIPAVAMAI 227 (559)
Q Consensus 183 r~~~~~~~~~~~~iG~~igp~i~~~l~--------~~~g~~~~f~i~~~~~~i 227 (559)
|++..++...+..+|..+|+.+...+. ..+|||++|++.++..++
T Consensus 152 Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 152 RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 999999988888888888876554332 357999999987654443
No 62
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.83 E-value=1.1e-18 Score=186.17 Aligned_cols=162 Identities=14% Similarity=0.112 Sum_probs=135.7
Q ss_pred HHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccC
Q 008623 42 ERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVS 121 (559)
Q Consensus 42 ~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 121 (559)
..+......+.+|. +.+++|.+..+.++..+.+.++..++.++.|+++||+ |||++++.+.++..++.+.+.++
T Consensus 28 ~~~~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a---- 101 (413)
T PRK15403 28 AYLTTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT---- 101 (413)
T ss_pred HHHHHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc----
Confidence 33344444555554 5678999999999999999999999999999999999 99999999999888888887765
Q ss_pred CCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHH
Q 008623 122 GLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIA 201 (559)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ig 201 (559)
++.+.++++|+++|++.+...+....++.|.+|+++ |++.+++.+.+.++|..+|
T Consensus 102 -------------------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g 156 (413)
T PRK15403 102 -------------------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIG 156 (413)
T ss_pred -------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHH
Confidence 457788999999999988766666778889999876 8999999999999999999
Q ss_pred hhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 202 SSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 202 p~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
|.+++.+.+..||++.|++.++..+++.+..++
T Consensus 157 ~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~ 189 (413)
T PRK15403 157 PLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLL 189 (413)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988889999999888766666554333
No 63
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.83 E-value=2.3e-19 Score=191.55 Aligned_cols=368 Identities=8% Similarity=-0.053 Sum_probs=210.8
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+|.+....++...+++.+.++++.|+++++|++..+.+.+.+.+.+...+++++.|+++||+ ||||+++++..+..+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~~ 88 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLLV 88 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHH
Confidence 4577777888888888888899999999999999999999999999999999999999999999 999999887655444
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+..........+. .......+..+.++..+...+.....+.++.++.. ++++..++.
T Consensus 89 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~ 145 (420)
T PRK09528 89 LFGPFFIYVFAPL-------------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS----RRSGFEYGR 145 (420)
T ss_pred HHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH----hhccccchh
Confidence 3322211100000 00011122222333333333333333334432211 136777888
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCC
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPA 269 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (559)
.+...++|..++|.+++++.+ .+|+++|++.++..++.++..+...++.++++...++ . ..
T Consensus 146 ~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------~~- 206 (420)
T PRK09528 146 ARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA-L----------------GA- 206 (420)
T ss_pred hHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc-h----------------hc-
Confidence 888899999999999998876 5899999887766665555444433221110000000 0 00
Q ss_pred ccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHH-HHHH
Q 008623 270 DKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGII-FSAV 348 (559)
Q Consensus 270 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~ 348 (559)
+ .+..+.-+... ..+.+.+.......+.... +...
T Consensus 207 -----------~-----------~~~~~~~~~~~----------------------~l~~~~~~~l~l~~~~~~~~~~~~ 242 (420)
T PRK09528 207 -----------N-----------ASAVSLKDALA----------------------LLKLPKFWFLVLYVIGVACFYDVF 242 (420)
T ss_pred -----------c-----------cccccHHHHHH----------------------HccCCCeEeehHHHHHHHHHHHHH
Confidence 0 00000000000 0000111111111111111 1222
Q ss_pred hcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHH
Q 008623 349 YSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILS 428 (559)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~ 428 (559)
..+.+.++... ..+...+ . ...+....+..+...+..++..+ +.+|+++| +.+..+.++.+++
T Consensus 243 ~~~~~~~~~~~--~~~~~~~--~--~~~g~~~~~~~~~~~~~~~~~g~----l~dr~g~~-------~~~~~~~~l~~~~ 305 (420)
T PRK09528 243 DQQFPNFFASF--FATPEQG--T--RVFGYLNSFQVFLEALIMFFAPF----IINRIGAK-------NALLLAGTIMAVR 305 (420)
T ss_pred HHHHHHHHHHH--HhccCcc--h--HHHHHHHHHHHHHHHHHHHHHHH----HHHHhCcc-------hhhHHHHHHHHHH
Confidence 22223322211 0011111 0 01112233333444455555554 55554443 4566667777666
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHH-HHHHHHHHH
Q 008623 429 MIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSAL-SLTTVALGN 507 (559)
Q Consensus 429 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~ 507 (559)
...+++.+ +.++++...++.+++.....+...+++.+..|++.+++..++ +++..++|+
T Consensus 306 ~~l~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~ 365 (420)
T PRK09528 306 IIGSGFAT--------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGA 365 (420)
T ss_pred HHHHHhcc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHH
Confidence 66655432 445556667778887777777788899999999999988766 678899999
Q ss_pred HHhhHHHHHhhhhh
Q 008623 508 YLSSLLVTIVTSIS 521 (559)
Q Consensus 508 ~lg~~l~~~v~~~~ 521 (559)
.+++.+.|++.+..
T Consensus 366 ~ig~~~~G~l~~~~ 379 (420)
T PRK09528 366 VFLSTLAGNLYDSI 379 (420)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998743
No 64
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.83 E-value=4.8e-19 Score=187.53 Aligned_cols=180 Identities=6% Similarity=-0.151 Sum_probs=132.8
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+|.+....++...++..+.+++|.|+++++|.+..+.+++.+.+.+...++.++.|+++||+ |||+.++.+.+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4467788888899999999999999999999999999999999999999999999999999999 999999887665554
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+..........+. ..........+.+++.+++.+...+....+..|..+ + ++..++.
T Consensus 81 ~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~-------~~~~~g~ 137 (396)
T TIGR00882 81 LFAPFFIYVFGPL---------------LQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-N-------SNFEYGK 137 (396)
T ss_pred HHHHHHHHHhhhH---------------HHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-h-------cccccch
Confidence 4332221100000 000112334566777888888777777666655322 1 3456677
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
.....++|..+||.+++.+.+ .+|+.+|++.+...++..+..+.
T Consensus 138 ~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 138 ARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred hhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999997765 59999998887666555444333
No 65
>TIGR00898 2A0119 cation transport protein.
Probab=99.83 E-value=4.5e-19 Score=193.76 Aligned_cols=147 Identities=12% Similarity=0.198 Sum_probs=127.4
Q ss_pred HHhhhcCCC---hhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC
Q 008623 56 YFKHQLDQS---SSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRG 132 (559)
Q Consensus 56 yl~~~lg~s---~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (559)
-+.+++|++ ..+.++..+.+.++..++.++.|+++||+ |||++++++.++..++.+...++
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~--------------- 177 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS--------------- 177 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc---------------
Confidence 456789998 89999999999999999999999999998 99999999999888888877765
Q ss_pred CcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcccc
Q 008623 133 EETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNE 212 (559)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~ 212 (559)
.+.+.+++.|++.|++.+...+...+++.|.+|+++ |+.+.++...+..+|.+++|.++..+.+
T Consensus 178 --------~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~-- 241 (505)
T TIGR00898 178 --------PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD-- 241 (505)
T ss_pred --------ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH--
Confidence 457889999999999999999999999999999987 9999999989999999999988766543
Q ss_pred CchhhhHHHHHHHHHHHHHHHhc
Q 008623 213 GWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 213 g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
||+.|++.++..++..+..++.
T Consensus 242 -wr~~~~~~~i~~~~~~~~~~~~ 263 (505)
T TIGR00898 242 -WRWLQLAVSLPTFLFFLLSWFV 263 (505)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhc
Confidence 9999998887666655554443
No 66
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.82 E-value=1.1e-18 Score=186.95 Aligned_cols=358 Identities=14% Similarity=0.139 Sum_probs=217.8
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc---cchhH-HHHHHHHHHHHHHHH
Q 008623 38 NECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY---LGRYW-TIAIFSIIYVIGMTF 113 (559)
Q Consensus 38 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~-~~~~~~~~~~~~~~~ 113 (559)
..+..+..+..+..+++.|+.+++|+++.++|.+.+...+...+..|+.|+++||. +|||| .++.+.+..+++.++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 34556666777778899999999999999999999999999999999999999983 38755 566677777777666
Q ss_pred HhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHH
Q 008623 114 LTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFS 193 (559)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 193 (559)
+... |.. ........+.+.+.+.+++.+.......++..|..++.+ +|++..++.+..
T Consensus 87 ~~~~---~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~R~~~~~~~~~~ 144 (437)
T TIGR00792 87 LFTT---PDF--------------SATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPR-----ERESLSTFRRFG 144 (437)
T ss_pred HHhC---CCC--------------CcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHH-----HHHHHHHHHHHH
Confidence 6544 210 001224556666777888888888888889999886533 389999998888
Q ss_pred HhHHHHHHhhhhhhhc-------cccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhcccc
Q 008623 194 INIGALIASSVLVWIQ-------DNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVE 266 (559)
Q Consensus 194 ~~iG~~igp~i~~~l~-------~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (559)
.++|+.+++.+.+.+. +..+|++.+.+.+++.++..+..++..++.+++++.+++.
T Consensus 145 ~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~~----------------- 207 (437)
T TIGR00792 145 ATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIEK----------------- 207 (437)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCccccc-----------------
Confidence 8888877766655443 2457998888777666555544443333211100000000
Q ss_pred CCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008623 267 LPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFS 346 (559)
Q Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 346 (559)
..+..+. + +.+.+.|.+...+...+.....+
T Consensus 208 ----------------------------~~~~~~~----------------~-----~~l~~~~~~~~~~~~~~~~~~~~ 238 (437)
T TIGR00792 208 ----------------------------KLSLKQI----------------F-----KALFKNDQLLILCLAYLFYNLAF 238 (437)
T ss_pred ----------------------------CCCHHHH----------------H-----HHHhCCHHHHHHHHHHHHHHHHH
Confidence 0000000 0 00111122222221111111111
Q ss_pred HHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHH
Q 008623 347 AVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISI 426 (559)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~ 426 (559)
.........+. +..++. . ...+.+..+..+..++..++..+ +.+|++ +++.+.+|.++.+
T Consensus 239 ~~~~~~~~~~~------~~~~~~-~--~~~~~~~~~~~i~~ii~~~~~~~----l~~r~g-------~~~~~~~~~~~~~ 298 (437)
T TIGR00792 239 NIKNGVQVYYF------TYVLGD-P--ELFSYMGSIAIVAGLIGVLLFPR----LVKKFG-------RKILFAGGILLMV 298 (437)
T ss_pred HHHcchhheeE------eeecCC-h--HHHHHHHHHHHHHHHHHHHHHHH----HHHHhC-------cHHHHHHHHHHHH
Confidence 11111111111 111110 0 00111222333444444555544 455543 3356667777777
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCC-------hhhHHHHHHHH
Q 008623 427 LSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAP-------DAMRSLCSALS 499 (559)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P-------~~~rg~~~g~~ 499 (559)
++++...+.. .+.+.+.+..++.+++.+...+..++++.|..| ++.+|...|++
T Consensus 299 ~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 359 (437)
T TIGR00792 299 LGYLIFFFAG-------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVR 359 (437)
T ss_pred HHHHHHHHcc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHH
Confidence 7666554421 133444556677888888888999999888875 56789999999
Q ss_pred HHHHHHHHHHhhHHHHHhhhhhc
Q 008623 500 LTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 500 ~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
++...+|+.+++.+.|.+.+..+
T Consensus 360 ~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 360 TFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999987655
No 67
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.82 E-value=7.9e-20 Score=188.15 Aligned_cols=179 Identities=20% Similarity=0.220 Sum_probs=156.9
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
.++.+..++.+..++..--|.+-..+ .-.++.+|.+++..|.+..++.+...++.|+.|+++||| .||+++..|..++
T Consensus 31 ~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~~iW 108 (493)
T KOG1330|consen 31 PTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGIFIW 108 (493)
T ss_pred chHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHHHHH
Confidence 34455566666667766666665533 345678999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+..+++ .++|++.+.|.+.|+|.+...|.++++++|.+|+++ |++.+
T Consensus 109 ~~Av~~~~fs-----------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~ 159 (493)
T KOG1330|consen 109 TLAVFASGFS-----------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVL 159 (493)
T ss_pred HHHHHHHHHH-----------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHH
Confidence 9999999887 579999999999999999999999999999999997 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhccc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
+++|++.++|.++|.++++.+.+..+ |||+|...+++.++..++.++..+
T Consensus 160 ~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~ 210 (493)
T KOG1330|consen 160 GIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVR 210 (493)
T ss_pred HHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhcc
Confidence 99999999999999999999988877 999999999888777776665554
No 68
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.82 E-value=4.9e-19 Score=192.21 Aligned_cols=174 Identities=11% Similarity=0.134 Sum_probs=132.0
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
++.++......++.....+...+.+| ++.+++|++..+.+++.+.+.++..++.+++|+++||+ |||+++..+.++..
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 34445555555555555555555444 56789999999999999999999999999999999998 99999999888888
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.++.+++ .+.+.+++.|++.|++.+...+ ...+++|++|+++ |+++.+
T Consensus 113 ~~~~~~~~~-----------------------~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~------rg~a~g 162 (476)
T PLN00028 113 PAVFCMSLV-----------------------SSATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKI------VGTANG 162 (476)
T ss_pred HHHHHHHHh-----------------------cCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhh------eeHHHH
Confidence 887777665 3466778889999998886543 4557899999886 999999
Q ss_pred hhhHHHhHHHHHHhhhhhhhc----c-----ccCchhhhHHHHHHHHHHHHHHHh
Q 008623 189 WFYFSINIGALIASSVLVWIQ----D-----NEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~----~-----~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+.+...++|+.+++.+.+.+. + ..|||++|++.+++.++..+..++
T Consensus 163 ~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 163 IAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 988877888887766655432 1 258999999888766555444433
No 69
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.82 E-value=1.3e-18 Score=182.47 Aligned_cols=158 Identities=16% Similarity=0.181 Sum_probs=136.6
Q ss_pred HHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 008623 45 AYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLK 124 (559)
Q Consensus 45 ~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (559)
+.....+.+|.+.+ ++|.+..+.+++.+.+.+...++.+++|+++||+ |||+++..+.++..++.+.+...
T Consensus 6 ~~~~~~p~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~------- 76 (377)
T PRK11102 6 AIDMYLPALPVIAA-DFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA------- 76 (377)
T ss_pred HHHHHhccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH-------
Confidence 34445677887764 6999999999999999999999999999999998 99999999999888888887765
Q ss_pred CCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhh
Q 008623 125 PVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSV 204 (559)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i 204 (559)
.+.+.+.+.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++|..++|.+
T Consensus 77 ----------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~ 134 (377)
T PRK11102 77 ----------------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPII 134 (377)
T ss_pred ----------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 346778889999999999988999999999999886 9999999999999999999999
Q ss_pred hhhhccccCchhhhHHHHHHHHHHHHHHH
Q 008623 205 LVWIQDNEGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 205 ~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
++++.+..||++.|++.++..++..+...
T Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 135 GGWLLVWFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHcChHHHHHHHHHHHHHHHHHHH
Confidence 99999988999999887766655544433
No 70
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.82 E-value=4.1e-18 Score=179.66 Aligned_cols=339 Identities=10% Similarity=0.047 Sum_probs=205.2
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchh----HHHHHHHHHHHHHHHHH
Q 008623 39 ECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRY----WTIAIFSIIYVIGMTFL 114 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr----~~~~~~~~~~~~~~~~~ 114 (559)
.++...++..+.+++|.|++ ++|.|..+.|++.+.+.+...++.++.|.++||+ ||+ +.+.+...+. . ...
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~--~-~~~ 87 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLF--A-VAF 87 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHH--H-HHH
Confidence 55555666777899999995 5899999999999999999999999999999999 984 3322222111 1 111
Q ss_pred hhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHH
Q 008623 115 TVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSI 194 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 194 (559)
... .++.+.+++.|++.+++.+...|...++..++ .++ |++.++..+...
T Consensus 88 ~~~----------------------~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~~ 137 (382)
T PRK11128 88 WFG----------------------AHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLWG 137 (382)
T ss_pred HHh----------------------cccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHHH
Confidence 111 14577888899999999888888877777765 222 788888888899
Q ss_pred hHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchh
Q 008623 195 NIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLL 274 (559)
Q Consensus 195 ~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (559)
++|..+||.+++++.+++||+.+|++.++..++.++... ..++. ++++++.++
T Consensus 138 ~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~----------------------- 190 (382)
T PRK11128 138 SIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPTI---MPQGESRQQ----------------------- 190 (382)
T ss_pred HHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCCC---CCccccccc-----------------------
Confidence 999999999999999999999999877754444433222 22211 111000000
Q ss_pred hhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 008623 275 YETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSS 354 (559)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (559)
+ . + ....+ ++..+.|.+...+...+ +....+....+
T Consensus 191 ------~----------~-~-------------------~~~~~-----~~i~~~~~~~~~~~~~~---l~~~~~~~~~~ 226 (382)
T PRK11128 191 ------E----------S-A-------------------GWPAW-----KALLKEPTVWRFLLCVS---LLQGSHAAYYG 226 (382)
T ss_pred ------c----------c-c-------------------ccchH-----HHHHcChhHHHHHHHHH---HHHHHhHhHHH
Confidence 0 0 0 00000 01111122222211111 11111111112
Q ss_pred hhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHH
Q 008623 355 LFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAV 434 (559)
Q Consensus 355 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~ 434 (559)
.... +.++ .| ......+....++.+..++...+.++ +.|| .+.++.+..+.++.+++++.+..
T Consensus 227 ~~~~---~~~~-~g--~s~~~~g~~~~~~~~~~~~~~~~~g~----l~~r-------~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 227 FSAI---YWQA-AG--YSASTIGYLWSLGVVAEVLIFAFSNR----LFRR-------WSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHHH---HHHH-CC--CCHhHHHHHHHHHHHHHHHHHHHHHH----HHHH-------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 1111 12 00001112222333333333333333 4444 45556677777777777665554
Q ss_pred HHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHH-HHHHHHHHHhhHH
Q 008623 435 LELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSL-TTVALGNYLSSLL 513 (559)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l 513 (559)
.+ +.+.+++..++.+++.+...+....+..+. |++.+++..++.+ ...++|..+|+.+
T Consensus 290 ~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i 348 (382)
T PRK11128 290 TT--------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL 348 (382)
T ss_pred hh--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 445566677888999999899999998887 4555789999887 6677888999999
Q ss_pred HHHhhhhh
Q 008623 514 VTIVTSIS 521 (559)
Q Consensus 514 ~~~v~~~~ 521 (559)
.|.+.+..
T Consensus 349 ~G~l~~~~ 356 (382)
T PRK11128 349 SGFLYQHL 356 (382)
T ss_pred HHHHHHhc
Confidence 99998743
No 71
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.81 E-value=1.7e-18 Score=188.32 Aligned_cols=361 Identities=16% Similarity=0.123 Sum_probs=236.1
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.+..+....+..+++.+....-++-++. ++.-|+...+.+.....+-..+..+++|.++||+ .|||+++.+-++..+.
T Consensus 11 ~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~~ 88 (524)
T PF05977_consen 11 NFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRALV 88 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHHH
Confidence 3445556677777777766655555554 5567888999999999999999999999999999 9999999998876655
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
...+.+... ....+++.+++..++.|++.+...|+..+++.|+.|+++ ..++.++.
T Consensus 89 ~~~L~~l~~------------------~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~ 144 (524)
T PF05977_consen 89 ALLLAVLAF------------------FGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALN 144 (524)
T ss_pred HHHHHHHHH------------------hCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHH
Confidence 555544321 112457888888899999999999999999999999987 88999999
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCc
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPAD 270 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (559)
+...|+...+||.++|.+....|-.++|.+.++..++.+..+...+++.+. +..+.++..+-+...++.
T Consensus 145 s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l~~G~ry-------- 213 (524)
T PF05977_consen 145 SISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSALREGLRY-------- 213 (524)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhHHHHHHH--------
Confidence 999999999999999999888898889998887766655544443332111 111111111111111000
Q ss_pred cchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhc
Q 008623 271 KSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYS 350 (559)
Q Consensus 271 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 350 (559)
+...+.+...+ ....+++....
T Consensus 214 -------------------------------------------------------v~~~~~l~~~l---~~~~~~~l~~~ 235 (524)
T PF05977_consen 214 -------------------------------------------------------VRSSPPLRSVL---LRSFLFNLFAS 235 (524)
T ss_pred -------------------------------------------------------HhcchHHHHHH---HHHHHHHHhhh
Confidence 01111111111 11111111111
Q ss_pred ccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHH
Q 008623 351 QMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMI 430 (559)
Q Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l 430 (559)
.....++.. ..+.++ +-...-+.+.+..+++.+++..+..+ +.+| ++..+.+..+.++.+++.+
T Consensus 236 a~~aLlPl~---a~~~l~--~~a~~yGll~a~~gvGai~Gal~~~~----l~~~-------~~~~~lv~~~~~~~a~~~~ 299 (524)
T PF05977_consen 236 AVWALLPLF---ARDVLG--GGASGYGLLLAAFGVGAILGALLLPR----LRRR-------LSSRRLVLLASLLFALALL 299 (524)
T ss_pred HHHHhhhHH---HHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHH----hhcc-------cCcchhhHHHHHHHHHHHH
Confidence 111111111 111222 00001112223333444444433332 2222 3444566677777777776
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHh
Q 008623 431 AAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLS 510 (559)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 510 (559)
.+++.. +.+...+..++.|++.........+.+++.+|+++||+++|++++....+..+|
T Consensus 300 ~lal~~--------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lG 359 (524)
T PF05977_consen 300 LLALSP--------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLG 359 (524)
T ss_pred HHhcch--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHH
Confidence 666532 455666778889999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhc
Q 008623 511 SLLVTIVTSIST 522 (559)
Q Consensus 511 ~~l~~~v~~~~~ 522 (559)
+++.|.+.+..+
T Consensus 360 sll~G~la~~~g 371 (524)
T PF05977_consen 360 SLLWGFLADHFG 371 (524)
T ss_pred HHHHHHHHHHhC
Confidence 999999987543
No 72
>PRK15075 citrate-proton symporter; Provisional
Probab=99.81 E-value=7.2e-18 Score=180.94 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=121.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHH-HHHHH-----HHHHhhhHHHHHhHhccchhHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNV-LDWSG-----TCYITPLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~-~~~~~-----~~~~~~~~~G~laDr~~Grr~~~~~~ 103 (559)
+....+++..++.......+. .....+.++++.++.+.+... +...+ ...++.++.|+++||+ ||||+++.+
T Consensus 15 ~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~~ 92 (434)
T PRK15075 15 RAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHHH
Confidence 344444444555544444444 444467788998887754433 22222 2235788999999999 999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcc
Q 008623 104 SIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHK 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 183 (559)
.++..++.+.++++.+... ........+++.|++.|++.+...+....+++|++|+++ |
T Consensus 93 ~~~~~~~~~l~~~~~~~~~---------------~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r 151 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYAT---------------IGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------K 151 (434)
T ss_pred HHHHHHHHHHHHhCCcHHH---------------HHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------c
Confidence 9999999888877621000 000001246889999999999999988999999999987 9
Q ss_pred ccchhhhhHHHhHHHHHHhhhhhhh--------ccccCchhhhHHHHH
Q 008623 184 SSFFNWFYFSINIGALIASSVLVWI--------QDNEGWGWGFGIPAV 223 (559)
Q Consensus 184 ~~~~~~~~~~~~iG~~igp~i~~~l--------~~~~g~~~~f~i~~~ 223 (559)
++..+++....++|..+++.+++.+ .+..|||++|++.++
T Consensus 152 g~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 152 GFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9999998888888888887776655 246799999987543
No 73
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.81 E-value=1.7e-18 Score=183.90 Aligned_cols=382 Identities=13% Similarity=0.119 Sum_probs=222.4
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHH
Q 008623 68 ASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFF 147 (559)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (559)
.+.+++.+.++.+++..++|+++||+ |||+.+....++..++.++..++... ....+++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~--------------------~~~e~li 120 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA--------------------PSFEMLI 120 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHH
Confidence 34567788999999999999999999 99999999999888888888776432 3478899
Q ss_pred HHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhh-hhc-cccCchhhhHHHHHHH
Q 008623 148 VALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLV-WIQ-DNEGWGWGFGIPAVAM 225 (559)
Q Consensus 148 ~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~-~l~-~~~g~~~~f~i~~~~~ 225 (559)
++|++.|+..|......+.++.|..|++- ||........+.++|..++..++. .+. ....|++.+....+..
T Consensus 121 ~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~ 194 (485)
T KOG0569|consen 121 LGRLIVGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPA 194 (485)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHH
Confidence 99999999999999999999999999997 999999999999999999965543 333 3345988888887766
Q ss_pred HHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchhhh-cccccccccCCcccCCCCccch---hhh
Q 008623 226 AIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYE-TADAESNITGSRKLDHTKDFSF---FDK 301 (559)
Q Consensus 226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~---~~~ 301 (559)
++.++.+.+. ||+|.++.. ++|.|+|++..+.....++.+. .+.
T Consensus 195 ~~~l~~l~~~--------------------------------PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~ 242 (485)
T KOG0569|consen 195 LLQLALLPFL--------------------------------PESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEML 242 (485)
T ss_pred HHHHHHHhcC--------------------------------CCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHH
Confidence 6666655443 344444443 3444444433333322221110 111
Q ss_pred hhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCccceeCcccccc
Q 008623 302 AAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSI 381 (559)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 381 (559)
.+.+.....+. ...++ .++.+.+...+. ....+.+.+...+.+......+.... -++.| +........+
T Consensus 243 ~e~~~~~~~~~-~~~sl-----~~~~~~~~lR~~-~~i~~~v~~~qq~sGi~ai~~Yst~i-~~~aG---~~~~~a~~an 311 (485)
T KOG0569|consen 243 REIEEEELEKK-KQISL-----RQLLKNPTLRRP-LLIGIVVSFAQQFSGINAIFFYSTSI-FKTAG---FTPEEAQYAN 311 (485)
T ss_pred HHHHHhccccc-cCCcH-----HHHhcCcchhHH-HHHHHHHHHHHHhcCcceeHHHHHHH-HHHcC---CCHHHHHHHH
Confidence 11111111100 11111 111111111111 11111222222222222222211110 11112 1111111111
Q ss_pred -ccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHH
Q 008623 382 -FDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMW 460 (559)
Q Consensus 382 -~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (559)
......++...+ ...+.+|.+|| ..+.+++.++.+..+.+........ ..+ .-++...
T Consensus 312 ~~~g~v~~~~t~~----~~~lid~~gRR-------pLll~~~~~~~~~~~~~~~~~~l~~-~~~---------~~~~y~~ 370 (485)
T KOG0569|consen 312 LGIGIVNLLSTLV----SPFLIDRLGRR-------PLLLISLSLMAVALLLMSIALFLSN-SFG---------SWLSYLC 370 (485)
T ss_pred HHHHHHHHHHHHH----HHHHHHhcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHH-Hhh---------hHHHHHH
Confidence 111111222222 22355666655 4666777777666665554432100 000 0011111
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhccCCCCCCCCCCCCCchhh
Q 008623 461 QVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTSISTKNGNLGWIPDNLNRGHLH 540 (559)
Q Consensus 461 ~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~ 540 (559)
++...........+..|..+-+.+|.+|++.|..++++..+.+.+.+.+.......+.+..+ .
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g---------------~-- 433 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG---------------P-- 433 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------c--
Confidence 23333334445556789999999999999999999999999999999888888888766433 1
Q ss_pred HHhhhhh----------heeeeCCCCC
Q 008623 541 YFFWLLT----------WYTYKRPVGS 557 (559)
Q Consensus 541 ~~f~~~~----------~~~~~~~~~~ 557 (559)
++|..++ |.+-+|+|||
T Consensus 434 ~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 434 YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 2333333 8888999987
No 74
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=2.8e-18 Score=178.76 Aligned_cols=145 Identities=17% Similarity=0.176 Sum_probs=120.0
Q ss_pred hhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC
Q 008623 49 MSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCH 128 (559)
Q Consensus 49 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (559)
+.+.+| .+++++|.+.++.+++.+.+.++..++.++.|+++||+ ||||++.++.++..++.+.. ..
T Consensus 19 ~~~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~----------- 84 (355)
T TIGR00896 19 VGPLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA----------- 84 (355)
T ss_pred CcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-----------
Confidence 344555 45679999999999999999999999999999999999 99999999988777766555 32
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhh
Q 008623 129 GPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWI 208 (559)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l 208 (559)
.+.+.+++.|++.|++.+...+....++.|.+|+ + |+++.++++.+.++|..+++.+++.+
T Consensus 85 ------------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 85 ------------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFPQ-R------VGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCcc-h------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3466778899999999998888888888888864 4 89999999999999999999998888
Q ss_pred ccccC--chhhhHHHHHHHH
Q 008623 209 QDNEG--WGWGFGIPAVAMA 226 (559)
Q Consensus 209 ~~~~g--~~~~f~i~~~~~~ 226 (559)
.+..+ |++.|.+.++..+
T Consensus 146 ~~~~~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 146 AQHSGGHWQQALAWWALPAL 165 (355)
T ss_pred HHhhhhhHHHHHHHHHHHHH
Confidence 76643 8888876655433
No 75
>PRK10133 L-fucose transporter; Provisional
Probab=99.81 E-value=3.9e-18 Score=183.21 Aligned_cols=150 Identities=15% Similarity=0.105 Sum_probs=120.5
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
+..+....+...+........+|. +++++|.++.+.++..+.+.++..++.++.|++.||+ ||||++..+.++++++.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~-i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~~~~ 105 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQ-FQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYALGA 105 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 444445555555555555555665 4889999999999999999999999999999999999 99999999999999988
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+.+..... ..+.+.+++.|+++|+|.+...+...+++.|..|+++ |...++..+
T Consensus 106 ~l~~~~~~--------------------a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~ 159 (438)
T PRK10133 106 ALFWPAAE--------------------IMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQ 159 (438)
T ss_pred HHHHHHHh--------------------cCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHH
Confidence 77532210 1457888999999999999999999999998766554 556788888
Q ss_pred HHHhHHHHHHhhhhhhhc
Q 008623 192 FSINIGALIASSVLVWIQ 209 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~ 209 (559)
....+|..+||.+++.+.
T Consensus 160 ~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 160 TFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899999999998876543
No 76
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.80 E-value=2.1e-18 Score=206.48 Aligned_cols=155 Identities=10% Similarity=0.034 Sum_probs=124.9
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCCh--hhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSS--STASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
+.+...++..++.++...+....+..++.+.++.+. ...+++.+++.+...++.+++|+++||+ |||++++.+.++.
T Consensus 9 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~~ 87 (1146)
T PRK08633 9 IGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLFE 87 (1146)
T ss_pred hhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHHH
Confidence 445566667777766666666666666666666654 3468888999999999999999999999 9999999888765
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
++..++..++.. ..+.+.+++.|++.|++.+...+...++++|++|+++ |++++
T Consensus 88 ~~~~~~~~~~~~--------------------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~ 141 (1146)
T PRK08633 88 VGLTLLIVLAYY--------------------LGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRAN 141 (1146)
T ss_pred HHHHHHHHHHHH--------------------HccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhh
Confidence 555554443311 1347889999999999999999999999999999987 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDN 211 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~ 211 (559)
++...+.++|.++||.+++++.+.
T Consensus 142 ~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 142 GLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998765
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.80 E-value=1.6e-18 Score=207.39 Aligned_cols=338 Identities=12% Similarity=0.024 Sum_probs=194.7
Q ss_pred hhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH--HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchh
Q 008623 66 STASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI--IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQS 143 (559)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (559)
...++..+++.+...++.+++|+++||+ |||+++..... +........... ..+.
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~----------------------~~s~ 108 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFH----------------------LNSV 108 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHH----------------------HhhH
Confidence 3467778889999999999999999999 99998644222 111111111111 0357
Q ss_pred HHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHH
Q 008623 144 ATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAV 223 (559)
Q Consensus 144 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~ 223 (559)
+.++++|+++|++.+...|...+++.|++|+++ |++++++.+++.++|.++||+++|++.+..+|++.|...++
T Consensus 109 ~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~ 182 (1140)
T PRK06814 109 PLLFAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMG 182 (1140)
T ss_pred HHHHHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence 889999999999999999999999999999987 99999999999999999999999999999999998854444
Q ss_pred HHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhh
Q 008623 224 AMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAA 303 (559)
Q Consensus 224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (559)
..++++++.+...+ .+..++..+......+- ..+
T Consensus 183 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------------------------------------~~~ 216 (1140)
T PRK06814 183 IAVLGWLASLFIPK-TGNAAPDLKIDRNIIRS---------------------------------------------TIT 216 (1140)
T ss_pred HHHHHHHHHhhCCC-CCCCCCCCeeccchHHH---------------------------------------------HHH
Confidence 44444333333222 11111000000000000 000
Q ss_pred hhhccccccccCCCccccchhhHHHHHHHHH-HHHHHHHHHHHHHHhcccchhhhhccccccCCCCCccceeCccccccc
Q 008623 304 VEIQSDNIKESVNPWRLCTVTQVEELKAIVR-LLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIF 382 (559)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 382 (559)
.+ +.+.+.+.+.. .+...+...++.....+++.+.. ..++ .-....+.+.+.
T Consensus 217 -------------~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-------~~~g--~~~~~~g~~~~~ 269 (1140)
T PRK06814 217 -------------LL-----KYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAK-------ETLG--GDENVATLFLAV 269 (1140)
T ss_pred -------------HH-----HHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHH-------HHcC--CchHHHHHHHHH
Confidence 00 00011111211 11111222222222222222221 1122 000112223344
Q ss_pred cceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCCC--CccchhH
Q 008623 383 DTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHN-YYDLP--EMPMSIM 459 (559)
Q Consensus 383 ~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~ 459 (559)
..++.+++..+.++ +.++.. ..+.+..+.++.++..+.+.+.... ....+. +..-. ....+.+
T Consensus 270 ~~~g~~ig~~~~g~----l~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 335 (1140)
T PRK06814 270 FSVGVAVGSFLASK----LSEGRI-------TLLYVPIGALLMGLFGLDLAFASSS---VPAEPAQLKSILVFLSKRHGW 335 (1140)
T ss_pred HHHHHHHHHHHHHH----HhCCce-------eeeeehHHHHHHHHHHHHHHhcccc---cccccccccchhhhhcccccH
Confidence 45555555655555 222211 1123333444443333333221000 000000 00000 0002445
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 460 WQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 460 ~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
.+.+..++.+++.++..+...+++.+.+|++.+|+++|+.++.++++..+++++.+.+..
T Consensus 336 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 336 RILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888999999999999999999999999999999999999999999999998863
No 78
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.80 E-value=8.5e-19 Score=188.34 Aligned_cols=155 Identities=15% Similarity=0.107 Sum_probs=125.4
Q ss_pred HHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCC
Q 008623 54 VRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGE 133 (559)
Q Consensus 54 ~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (559)
..++++ .|.+..+.+++.+.+.++..++.++.|+++||+ |||+.++.+.++..++.+...... .
T Consensus 50 ~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~---~----------- 113 (438)
T TIGR00712 50 MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVP---W----------- 113 (438)
T ss_pred hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccc---c-----------
Confidence 346665 599999999999999999999999999999999 999999999888888777665431 1
Q ss_pred cccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhc-ccc
Q 008623 134 ETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQ-DNE 212 (559)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~-~~~ 212 (559)
...+...+.+.|++.|++.+...+....++.|++|+++ |++++++++.+.++|+.++|.+.+.+. +..
T Consensus 114 -----~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~ 182 (438)
T TIGR00712 114 -----ATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFN 182 (438)
T ss_pred -----ccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhh
Confidence 01245667788999999999888888899999999887 999999999999999999988777544 456
Q ss_pred CchhhhHHHHHHHHHHHHHHHhc
Q 008623 213 GWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 213 g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
+||.+|++.++..++..+..++.
T Consensus 183 ~w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 183 DWHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999998877665554443333
No 79
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.80 E-value=1.4e-17 Score=175.85 Aligned_cols=166 Identities=14% Similarity=0.078 Sum_probs=138.0
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHh
Q 008623 36 LGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLT 115 (559)
Q Consensus 36 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 115 (559)
....+....+.....+.+|.+ .+++|.+..+.++..+.+.+...++.++.|+++||+ |||+.++.+.++..++.+.+.
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~~~~~ 86 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRI-AADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIASLLCS 86 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHHHHHH
Confidence 334445555555555666655 567999999999999999999999999999999998 999999999988888887776
Q ss_pred hhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHh
Q 008623 116 VTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSIN 195 (559)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 195 (559)
.. .+.+.+++.|++.|++.+...+...+++.|.+|+++ |+++.++.+...+
T Consensus 87 ~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 137 (392)
T PRK10473 87 LA-----------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITC 137 (392)
T ss_pred Hh-----------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHH
Confidence 54 346677889999999999888888999999999886 9999999999999
Q ss_pred HHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 196 IGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 196 iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
+|..++|.+++.+.+..||++.|++.++..++..+..
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888899999988876655554443
No 80
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.79 E-value=3.8e-17 Score=174.56 Aligned_cols=354 Identities=14% Similarity=0.061 Sum_probs=199.7
Q ss_pred HhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccch-hHHHHHHHHHHHHHHHH
Q 008623 35 ILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGR-YWTIAIFSIIYVIGMTF 113 (559)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~~~~~~ 113 (559)
+.+..++...++-...+.++.|+++++|++..+.|++.+.+.++..+++++.|+++||+ || |+++.++.++..++...
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHH
Confidence 44556666666666779999999999999999999999999999999999999999998 75 76777777766666655
Q ss_pred HhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccc--------cCCCCcchHhhhcccc
Q 008623 114 LTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGA--------DQFDDADEAEKKHKSS 185 (559)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~--------~~~~~~~~~~~~~r~~ 185 (559)
..+. .+.+.+++.+++.+++.+...+...++.. |..... .|.+
T Consensus 86 ~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~------~~~r 136 (418)
T TIGR00889 86 AAQV-----------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDF------PPIR 136 (418)
T ss_pred HHHh-----------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcC------CCee
Confidence 5544 34666777788888876665555444322 212222 2455
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCC-CChhHHHHHHHHHHHhhcc
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPG-GSPLTRICQVVAASIRKHK 264 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 264 (559)
.++ .+|..+||.+++.+.....|. +|++.++..++..+..+. .++.+..+++ +.+.++..
T Consensus 137 ~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~~~----------- 197 (418)
T TIGR00889 137 VMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALT-LPDIPVAKSTAKMSIKVML----------- 197 (418)
T ss_pred eeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhc-CCCCCCCccccccCHHHHh-----------
Confidence 544 478889998888774332344 455555544444433222 2221100000 00000000
Q ss_pred ccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHH-HHHHHHHH
Q 008623 265 VELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRL-LPIWATGI 343 (559)
Q Consensus 265 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~ 343 (559)
..+. .+..+.+++... +..++...
T Consensus 198 ---------------------------------~~~~----------------------~~~~k~~~~~~~~~~~~~~~~ 222 (418)
T TIGR00889 198 ---------------------------------GLDA----------------------FILFKNKRMAIFFFFSMLLGA 222 (418)
T ss_pred ---------------------------------hhhH----------------------HHHhcCCCeeeHHHHHHHHHh
Confidence 0000 000000111111 11111111
Q ss_pred HHHHHhcccchhhhhccccccCCCCCcccee-CccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHH
Q 008623 344 IFSAVYSQMSSLFVLQGERMDTHVGNSSFKI-PPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGL 422 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~ 422 (559)
.....+...+...... ..+.... +++.. ..+....+..+..++...+.++ +.+|+ ++++.+..+.
T Consensus 223 ~~~~~~~~~~~~~~~~--g~~~~~~-~~~~~~~~g~~~~~~~i~~i~~~~~~g~----l~dr~-------g~r~~l~~~~ 288 (418)
T TIGR00889 223 PLQITNIFGNGFLHEF--GRNPEFA-DSFVVKNASIWMSLSQFSEIFFILTIPF----FLKRF-------GIKKVMLLSL 288 (418)
T ss_pred HHHHHHHhHHHHHHHh--ccccccc-chhhhhhHHHHHHHHHHHHHHHHHHHHH----HHHHh-------CcHHHHHHHH
Confidence 1111111111111110 0000000 00000 0112222333333444444443 45553 3345677777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHH-H
Q 008623 423 FISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSL-T 501 (559)
Q Consensus 423 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~-~ 501 (559)
++.++++..+..... .....+.+.+..++.+++++...+....++.+.+|++.||+++|+.+ +
T Consensus 289 ~~~~v~~~l~~~~~~----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~ 352 (418)
T TIGR00889 289 VAWALRFGFFAYGDP----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLM 352 (418)
T ss_pred HHHHHHHHHHHHcCc----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 777776655544210 00123345566788999999989999999999999999999999997 6
Q ss_pred HHHHHHHHhhHHHHHhhhhhc
Q 008623 502 TVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 502 ~~~lg~~lg~~l~~~v~~~~~ 522 (559)
..++|+.+||.+.|.+.+..+
T Consensus 353 ~~~lg~~iGp~l~G~l~~~~g 373 (418)
T TIGR00889 353 CNGFGSLLGYILSGVMVEKMF 373 (418)
T ss_pred HHhhHHHHHHHHHHHHHHHhc
Confidence 789999999999999987544
No 81
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.79 E-value=3.2e-18 Score=174.86 Aligned_cols=172 Identities=16% Similarity=0.124 Sum_probs=151.5
Q ss_pred hhHhhHHHHHHHHHHhhh---hhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMS---TNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+-++++.++.-.++|-.. ....+++.++.++|.+|.|.+.+.+++.+.++..+.|.++||. +.|+.+-+++++.++
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai 106 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAI 106 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHH
Confidence 556677777778888763 4456788889999999999999999999999999999999998 999999999999999
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
..++++++ .+.+.+.+..++.|..+|.-.|....+++.+++++| ||+..++
T Consensus 107 ~nil~Gfs-----------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~si 157 (448)
T COG2271 107 VNILFGFS-----------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWWSI 157 (448)
T ss_pred HHHHHhhh-----------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceEEE
Confidence 99999887 457778888889999999999999999999999998 9999999
Q ss_pred hhHHHhHHHHHHhhhh--hhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 190 FYFSINIGALIASSVL--VWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~--~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
.+.+-|+|+.+.|++. +++..+.+||..|++++++.++..+..++
T Consensus 158 Wn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~ 204 (448)
T COG2271 158 WNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLF 204 (448)
T ss_pred ehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 89998889999999999766544444433
No 82
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.79 E-value=2.9e-17 Score=180.09 Aligned_cols=360 Identities=15% Similarity=0.152 Sum_probs=210.7
Q ss_pred hhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHH
Q 008623 67 TASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATF 146 (559)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (559)
+.+++.+...+++.++.++.|+++|++ |||++++++.+++.++.+.++++ .+..++
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a-----------------------~~~~~l 145 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA-----------------------PSWYQL 145 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-----------------------hhHHHH
Confidence 458999999999999999999999999 99999999999999999999987 468899
Q ss_pred HHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc--cCchhhhHHHHHH
Q 008623 147 FVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN--EGWGWGFGIPAVA 224 (559)
Q Consensus 147 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~--~g~~~~f~i~~~~ 224 (559)
.++|++.|+|.|+....++.+++|..|++. |+...+..+....+|..++..+ ++..++ .+||..+.+..+.
T Consensus 146 ~~GR~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~~-~~~~~~~~~~Wr~~~~~~~i~ 218 (513)
T KOG0254|consen 146 IVGRILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYCI-NYGTSKVYAGWRIPLGLALIP 218 (513)
T ss_pred HHHHHHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHHH-hhhhccCCccHHHHHHHHHHH
Confidence 999999999999999999999999999987 9999999999999999999654 444443 4899888877766
Q ss_pred HHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCC-Cccchhhhhh
Q 008623 225 MAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHT-KDFSFFDKAA 303 (559)
Q Consensus 225 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 303 (559)
.++..+.+++.. ++|+++.+.++.+++++...++... ++....+...
T Consensus 219 ~~~~~~~~~~~p--------------------------------esp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~ 266 (513)
T KOG0254|consen 219 AVILALGMLFLP--------------------------------ESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELEL 266 (513)
T ss_pred HHHHHHHHHhCC--------------------------------CChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHH
Confidence 665555533322 1222222222222222111111110 0000000000
Q ss_pred hh--hcccc-ccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCccceeCccccc
Q 008623 304 VE--IQSDN-IKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLS 380 (559)
Q Consensus 304 ~~--~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 380 (559)
.. ..... ..+....|+++.. ....|+....+.+..++..........|+....+ ..| +..+.....
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~------~~g---~~~~~~~~~ 335 (513)
T KOG0254|consen 267 LKIKLLVEAEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFK------SAG---LKSDTFLAS 335 (513)
T ss_pred HHHHHHHhhhcccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHH------hcC---CCCchHHHH
Confidence 00 00000 0000001211111 0122222222223233322222222222222211 112 111111111
Q ss_pred cccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHH
Q 008623 381 IFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMW 460 (559)
Q Consensus 381 ~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 460 (559)
.+..+..++...+. .-+.+|++|| ..+..|...+.++.++++..........+ .........
T Consensus 336 ~~~~~v~~~~t~~~----~~lvd~~gRr-------~lll~s~~~m~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 397 (513)
T KOG0254|consen 336 IILGVVNFLGTLVA----TYLVDRFGRR-------KLLLFGAAGMSICLVILAVVGVFALYYPN-------SSKGAGWLA 397 (513)
T ss_pred HHHHHHHHHHHHHH----HHHHHHhccH-------HHHHHhHHHHHHHHHHHHHHHHHhccCCC-------cccchhHHH
Confidence 11111111111111 2255555544 47778888888888877765432100000 011123333
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 008623 461 QVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVT 518 (559)
Q Consensus 461 ~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~ 518 (559)
++...++......+..|..+.+..|..|.+.|+.+.++....+.+.+.+-........
T Consensus 398 ~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~ 455 (513)
T KOG0254|consen 398 IVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFIT 455 (513)
T ss_pred HHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555666667778889999999999999999999999999998877765555544
No 83
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.78 E-value=1.1e-17 Score=175.23 Aligned_cols=155 Identities=15% Similarity=0.156 Sum_probs=112.2
Q ss_pred HHHHHhhhcC--CChhhhHHHHHH--H---HHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 008623 53 LVRYFKHQLD--QSSSTASKNVLD--W---SGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKP 125 (559)
Q Consensus 53 l~~yl~~~lg--~s~~~~~~~~~~--~---~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (559)
...++.++.. .++.+.+.+.+. + .+...++.++.|+++||+ ||||+++.+.++..++.+.+.++.+.+.
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~--- 90 (394)
T TIGR00883 15 AAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYAT--- 90 (394)
T ss_pred HHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhh---
Confidence 4445555543 334444444432 2 233346789999999998 9999999999998888888776521110
Q ss_pred CCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 126 VCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
........+++.|++.|++.+...+...+++.|.+|+++ |++..++.+.+..+|..+++.+.
T Consensus 91 ------------~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 91 ------------IGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred ------------hHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHH
Confidence 000112357888999999999999999999999999887 99999999999999999999877
Q ss_pred hhhc--------cccCchhhhHHHHHHHHHHH
Q 008623 206 VWIQ--------DNEGWGWGFGIPAVAMAIAV 229 (559)
Q Consensus 206 ~~l~--------~~~g~~~~f~i~~~~~~i~~ 229 (559)
..+. +..+|+++|.+.++..+++.
T Consensus 153 ~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 153 LLLSYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHHHHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 6543 35689999987766554443
No 84
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.78 E-value=2e-17 Score=172.33 Aligned_cols=155 Identities=14% Similarity=0.156 Sum_probs=117.6
Q ss_pred hhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc----cchhHHH-HHHHHHHHHHHHHHhhhhccCCCCC
Q 008623 51 TNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY----LGRYWTI-AIFSIIYVIGMTFLTVTASVSGLKP 125 (559)
Q Consensus 51 ~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (559)
..+|.++ +++|+|.++.++.... .+...+ .++.|+++||+ +||||.+ +.+.++.++.+..+.+. +
T Consensus 9 ~~~~~~~-~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~---~---- 78 (356)
T TIGR00901 9 NTLPYWL-RSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFL---V---- 78 (356)
T ss_pred hHHHHHH-HHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcC---C----
Confidence 4455555 5789999999988655 333344 89999999997 4899975 45566666665555443 1
Q ss_pred CCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 126 VCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
...+.+.+....++.+++.+...+...+++.|++|+++ |+++.++...+.++|.++++.++
T Consensus 79 -------------~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~ 139 (356)
T TIGR00901 79 -------------PSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLA 139 (356)
T ss_pred -------------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHH
Confidence 11345556666667788888888999999999998876 99999999999999999999999
Q ss_pred hhhccccC--------chhhhHHHHHHHHHHHHHHHh
Q 008623 206 VWIQDNEG--------WGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 206 ~~l~~~~g--------~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+++.+..| ||.+|++.++..++.++..++
T Consensus 140 ~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 140 LVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred HHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 99988888 999999888766665554443
No 85
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.78 E-value=3.6e-17 Score=174.22 Aligned_cols=170 Identities=13% Similarity=0.088 Sum_probs=135.2
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
++.++...+...+......+.+ ..+++++|.+..+.+++.+.+.++..++.++.|++.||+ |||++++.+.++.+++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~-~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~ 82 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMV-PQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGA 82 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHH
Confidence 3444444454444443333445 456889999999999999999999999999999999999 99999999999988888
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
..+..+. ...+.+.+++.|++.|+|.+...+...+++.+..|+++ |++..++.+
T Consensus 83 ~l~~~~~--------------------~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 136 (410)
T TIGR00885 83 FLFWPAA--------------------EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQ 136 (410)
T ss_pred HHHHHHH--------------------hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHH
Confidence 7764431 11357788899999999999999999999999988876 888899999
Q ss_pred HHHhHHHHHHhhhhhhhccc--------------------------cCchhhhHHHHHHHHHHH
Q 008623 192 FSINIGALIASSVLVWIQDN--------------------------EGWGWGFGIPAVAMAIAV 229 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~--------------------------~g~~~~f~i~~~~~~i~~ 229 (559)
...++|..++|.+++.+... .+||++|.+.++..++..
T Consensus 137 ~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~ 200 (410)
T TIGR00885 137 SFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVA 200 (410)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988876421 359999987776554443
No 86
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.78 E-value=1.2e-17 Score=170.87 Aligned_cols=375 Identities=13% Similarity=0.033 Sum_probs=243.7
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
+.++|+++...+. +...+..+.+...+..++.+++|+|+.|.+++.+...+...+..++-|.+.||+ |.|++..++.+
T Consensus 10 ~~~~~~L~~S~~a-f~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~ 87 (417)
T COG2223 10 RIARRNLWLSTLA-FDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSML 87 (417)
T ss_pred cchhHHHHHHHHH-HHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHH
Confidence 3456666655444 444455555667777888899999999999999999999999999999999998 99999999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+..+-.+.++++.. .++.+.+++..++.|++.+- +.+..+++++++|+++ +|.
T Consensus 88 l~~IP~~~~~~a~~--------------------~~~~~~ll~~gll~G~~Gas-Fav~m~~~s~~fP~~~------qG~ 140 (417)
T COG2223 88 LLLIPCLGLAFAVT--------------------YPSTWQLLVIGLLLGLAGAS-FAVGMPNASFFFPKEK------QGL 140 (417)
T ss_pred HHHHHHHHHHHHcc--------------------CCchHHHHHHHHHHhcccce-ehcccccccccCChhh------hhH
Confidence 98888888888732 23357788888888887665 4677789999999997 899
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccC---chhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhh
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEG---WGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRK 262 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g---~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (559)
+++++. ..|+|..+...++.++....| |+.+..+..+.+++..+..++..+.....++..++...
T Consensus 141 AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~----------- 208 (417)
T COG2223 141 ALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP----------- 208 (417)
T ss_pred HHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch-----------
Confidence 999999 899999999999998888888 99888888888888777776655432211111110000
Q ss_pred ccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHH
Q 008623 263 HKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATG 342 (559)
Q Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 342 (559)
. ..+.+...++...+..+.+.+
T Consensus 209 ---------------------------------------~-------------------~~~~v~~~~~~W~lsllY~~t 230 (417)
T COG2223 209 ---------------------------------------A-------------------QLKAVFSNKDTWLLSLLYFAT 230 (417)
T ss_pred ---------------------------------------h-------------------HHHHHhcCcchHHHHHHHHHH
Confidence 0 001112122222222233332
Q ss_pred HHHHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHH
Q 008623 343 IIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGL 422 (559)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~ 422 (559)
...++-+. ..+ +++...+++ -.....+.+....++...+..|+.++ +.|| ++..|.+.+.+
T Consensus 231 FG~Fvgfs---~~l---~~~~~~~fg--~~~~~Ag~~a~~f~~~g~l~Rp~GG~--------LsDR---~Gg~rv~~~~f 291 (417)
T COG2223 231 FGGFVGFS---AYL---PMYLVTQFG--LSPVTAGLIAFLFPLIGALARPLGGW--------LSDR---IGGRRVTLAVF 291 (417)
T ss_pred HHHHHHHH---HHH---HHHHHHhcC--CChhhHHHHHHHHHHHHHHHHhccch--------hhhh---ccchhHHHHHH
Confidence 22222222 211 122233333 01122223333444444444555544 4444 55556777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHH
Q 008623 423 FISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTT 502 (559)
Q Consensus 423 ~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~ 502 (559)
..++++..+....... .....+.+......+..++..++-+-..+-++..+.|+ +-|.+.|+....
T Consensus 292 ~~~~~~~~~l~~~~~~-------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~ 357 (417)
T COG2223 292 VGMALAAALLSLFLTG-------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAI 357 (417)
T ss_pred HHHHHHHHHHHccccc-------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHh
Confidence 8887777776653210 01112334444444555555555555556666666654 689999999999
Q ss_pred HHHHHHHhhHHHHHhhhhhccCCCCCCCCCCCCCchhhHHhhhhh
Q 008623 503 VALGNYLSSLLVTIVTSISTKNGNLGWIPDNLNRGHLHYFFWLLT 547 (559)
Q Consensus 503 ~~lg~~lg~~l~~~v~~~~~~~~~~~w~~~~~~~~~~~~~f~~~~ 547 (559)
+++|+..-|...+...+.++ .+..+||++.
T Consensus 358 G~lGGf~lp~~~g~~~~~tg---------------~~~~~f~~~~ 387 (417)
T COG2223 358 GGLGGFFLPLAFGVSLDLTG---------------SYTGAFMLLL 387 (417)
T ss_pred ccccccchhHHHHHHHHhcc---------------cHHHHHHHHH
Confidence 99999999999998876543 3566777776
No 87
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.75 E-value=2.9e-16 Score=171.11 Aligned_cols=178 Identities=13% Similarity=0.166 Sum_probs=137.7
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc----cchhHH-HHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY----LGRYWT-IAI 102 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~~-~~~ 102 (559)
++|+.+.++...+...+..+.....+|.|++ +.|.+..+.+...... .. +++.+++|.++||+ +||||. +..
T Consensus 10 ~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~-~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~ 86 (491)
T PRK11010 10 QQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVG-QA-YVFKFLWSPLMDRYTPPFLGRRRGWLLA 86 (491)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHH-HH-HHHHHHHHHHHHcccccCCCCchHHHHH
Confidence 3444666777778888888888889999986 4589988888863222 22 36899999999995 288886 546
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc
Q 008623 103 FSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (559)
+.+..+++...+++.. | ..+.+.+.+.+++.+++.+...+...++..|++|+++
T Consensus 87 ~~i~~~~~~~~~a~~~--~------------------~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------ 140 (491)
T PRK11010 87 TQLLLLVAIAAMGFLE--P------------------GTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------ 140 (491)
T ss_pred HHHHHHHHHHHHHHcC--C------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------
Confidence 6666666666665541 1 2457778888889999999999999999999999886
Q ss_pred cccchhhhhHHHhHHHHHHhhhhhhhcc-ccCchhhhHHHHHHHHHHHHHHHh
Q 008623 183 KSSFFNWFYFSINIGALIASSVLVWIQD-NEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 183 r~~~~~~~~~~~~iG~~igp~i~~~l~~-~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
|+++.++...+..+|..+++.+++++.+ ..|||.+|++.++..++.++..++
T Consensus 141 rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~ 193 (491)
T PRK11010 141 RGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL 193 (491)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999988 569999999888766655544433
No 88
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.74 E-value=5.9e-16 Score=166.08 Aligned_cols=414 Identities=11% Similarity=0.061 Sum_probs=240.2
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHh----ccchhHHHHHH-HHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADA----YLGRYWTIAIF-SII 106 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~~~~~-~~~ 106 (559)
+..+....+..++++-...++++.|+ +++|.+....+.+.....+...+.+|+.|+++|| + ||||.++++ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl-~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYV-QELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 56677778888888888888898887 5799999999999999999999999999999995 7 999998875 555
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
.+++.++++++..+.... ++ +.++ . ......+...++..+..++.....+...++++|.+|+++ ++++.+
T Consensus 84 ~~~~l~ll~~~~~~~~~~---~~-~~~~-~-~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~----~~~~~a 153 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLF---GD-NLDK-K-TKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDA----RRTRIA 153 (477)
T ss_pred HHHHHHHHHhCchhhhhc---cc-cccc-c-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchh----HHHHHH
Confidence 556666665542111000 00 0000 0 000011233444445556777777788899999999886 123578
Q ss_pred hhhhhHHHhHHHHHHhhhhhhh--cccc-------------CchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHH
Q 008623 187 FNWFYFSINIGALIASSVLVWI--QDNE-------------GWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTR 251 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l--~~~~-------------g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 251 (559)
.++.+...++|+.+|+.+++.. .+.. +.+..|++.+++.+++.+...+..|+.+..++++.+..+
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~ 233 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSE 233 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhh
Confidence 9999999999999999988754 2211 567889998887777777666655553221111100000
Q ss_pred HHHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHH-HH
Q 008623 252 ICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEE-LK 330 (559)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~ 330 (559)
. ++.+ ..+. ...+++.. +...+ -|
T Consensus 234 ---------------~----------~~~~----------~~~~-------------------~~~~~~i~-~~~~~mP~ 258 (477)
T TIGR01301 234 ---------------A----------APPS----------KHGE-------------------EAFFGELF-GAFKYLPR 258 (477)
T ss_pred ---------------c----------cccc----------ccch-------------------hhhHHHHH-HHHHHCCH
Confidence 0 0000 0000 00000000 00111 12
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCC
Q 008623 331 AIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKN 410 (559)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~ 410 (559)
.+.+++...++.-+-|..+..+.+.+..+..+-...-..+.++-.. -......+...+...+++.++.++.+|++++|
T Consensus 259 ~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gv-r~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k- 336 (477)
T TIGR01301 259 PVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGV-RAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK- 336 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-
Confidence 2334454555555556665555555443321110000000000000 00111112222222344555555677755331
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhhhc-CCCCCCCccch-hHHHHHHHHHHHHHHHHHhhhhHHHhhhc
Q 008623 411 GLTQLQRMGIGLFISILSMIAAAVLELIRLR--MVREH-NYYDLPEMPMS-IMWQVPQYFLIGCAEVFTFIGQLEFFYEQ 486 (559)
Q Consensus 411 ~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~--~~~~~-~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 486 (559)
..-.++.++.+++++...++.....+ ..+.. .+. .+ +.. .+...+.+.+.|+.........++++++.
T Consensus 337 -----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~ 408 (477)
T TIGR01301 337 -----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESL--PP-PTGIKASALIVFAILGIPLAITYSIPFALASIR 408 (477)
T ss_pred -----hHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccc--Cc-chhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHH
Confidence 23367777888888777765421000 00000 000 00 111 25566777889999999999999999999
Q ss_pred CCh--hhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhc
Q 008623 487 APD--AMRSLCSALSLTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 487 ~P~--~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
.|+ +..|..+|+.|++-.+.+.+.++..|.+.+..+
T Consensus 409 ~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g 446 (477)
T TIGR01301 409 SSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFG 446 (477)
T ss_pred ccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 995 455999999999999999999998888665544
No 89
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.73 E-value=2.8e-15 Score=159.17 Aligned_cols=164 Identities=16% Similarity=0.181 Sum_probs=127.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc----cchhH-HHHHHHHHHHHHHH
Q 008623 38 NECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY----LGRYW-TIAIFSIIYVIGMT 112 (559)
Q Consensus 38 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~----~Grr~-~~~~~~~~~~~~~~ 112 (559)
..+.....+.-...-+|.|+++ .|+|.++.|++...... .+..+++|+++||+ +|||| .++.+.++.+++..
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 3445555555566789999975 59999999999766654 68999999999997 26665 67777777776666
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
.+.+. + ...+.+.+++..++.+++.+...+...+++.|++|+++ |+++.++...
T Consensus 84 ~l~~~---~-----------------~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~ 137 (402)
T PRK11902 84 AMAFC---P-----------------PHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVL 137 (402)
T ss_pred HHHhc---C-----------------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHH
Confidence 66544 1 12346666666667788888888999999999999887 9999999999
Q ss_pred HHhHHHHHHhhhhhhhccc-cCchhhhHHHHHHHHHHHH
Q 008623 193 SINIGALIASSVLVWIQDN-EGWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~-~g~~~~f~i~~~~~~i~~~ 230 (559)
+.++|..+++.+++++.+. .|||..|++.++..++..+
T Consensus 138 g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l 176 (402)
T PRK11902 138 GYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGAL 176 (402)
T ss_pred HHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988875 5999999988776555444
No 90
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.72 E-value=7.9e-16 Score=154.78 Aligned_cols=116 Identities=15% Similarity=0.152 Sum_probs=102.7
Q ss_pred ChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchh
Q 008623 64 SSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQS 143 (559)
Q Consensus 64 s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (559)
+..-+|.+-+.|.+...+..+.+|.++||+ |||+++..+.+..++.....+.+ .++
T Consensus 66 ~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S-----------------------~~F 121 (451)
T KOG2615|consen 66 SVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS-----------------------RNF 121 (451)
T ss_pred cchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH-----------------------HHH
Confidence 345578888999999999999999999999 99999999999888877777765 456
Q ss_pred HHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcc
Q 008623 144 ATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 144 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~ 210 (559)
..+.++|++.|+..|-. +...++++|.+++++ |+.+++....+..+|.++||+++|++..
T Consensus 122 ~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 122 AAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhHHHh
Confidence 66777799999999876 667899999999987 9999999999999999999999999987
No 91
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.70 E-value=4.7e-20 Score=198.40 Aligned_cols=359 Identities=17% Similarity=0.166 Sum_probs=207.1
Q ss_pred hhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHH
Q 008623 67 TASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATF 146 (559)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (559)
..++..+...++..++.+++|+++||+ |||++++.+.++.+++.++..++. ...+.+.+
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~ 105 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAP--------------------SYNNFWML 105 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccc--------------------cccccccc
Confidence 467888999999999999999999999 999999999999999988887761 11257889
Q ss_pred HHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc---cCchhhhHHHHH
Q 008623 147 FVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN---EGWGWGFGIPAV 223 (559)
Q Consensus 147 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~---~g~~~~f~i~~~ 223 (559)
.++|++.|++.|+..+....++.|..|++. |+...++.+....+|.+++..+.-.+.+. .+||..+.+.++
T Consensus 106 ~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~ 179 (451)
T PF00083_consen 106 LIGRFLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAI 179 (451)
T ss_pred cccccccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999999987 99999999999999998888765444333 349998887776
Q ss_pred HHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchhhhcccccccccCCcccCCCCccchhhhhh
Q 008623 224 AMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAA 303 (559)
Q Consensus 224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (559)
..++.++...+ .||+|+++...++.|++++..+++...+..+ .+..+
T Consensus 180 ~~l~~~~~~~~--------------------------------~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~-~~~~~ 226 (451)
T PF00083_consen 180 PSLLVLLLRFF--------------------------------LPESPRWLLSKGRDEEAEKVLRKLRGKEIED-EEIEE 226 (451)
T ss_pred ccccccccccc--------------------------------cccccceeccccccccccccccccccccccc-ccccc
Confidence 55443332211 4566777777776666666655543221100 00000
Q ss_pred hhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCccceeCcc-ccccc
Q 008623 304 VEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPA-SLSIF 382 (559)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~ 382 (559)
...+.....+....|++....+. .+++++..+.+...... ........+.+ ..-.+.+ .+.. ....+
T Consensus 227 ~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~-----~g~~~~~~~~~-~i~~~~~-----~~~~~~~~~~ 294 (451)
T PF00083_consen 227 IKAEKKESQESKASWRDLFRNKK-YRKRLLIALLLQFFQQF-----SGINFIFYYSP-SIFENAG-----ISNSFLATLI 294 (451)
T ss_pred cccccccccccceeeeecccccc-ccccccccccccccccc-----ccccccccccc-ccccccc-----cccccccccc
Confidence 00000000000112222221111 12222222111111111 11111111111 1111112 1111 11111
Q ss_pred cceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhhcCCCCCCCccchhHHH
Q 008623 383 DTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAA-VLELIRLRMVREHNYYDLPEMPMSIMWQ 461 (559)
Q Consensus 383 ~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (559)
..+..++...+.. .+.+|++|| +.+..+.++++++.+.++ ..... .+ .+...+...+
T Consensus 295 ~~~~~~~~~~~~~----~~~~~~GRr-------~~~i~~~~~~~~~~~~~~~~~~~~------~~-----~~~~~~~~~i 352 (451)
T PF00083_consen 295 LGLVNFLGTLLAI----FLIDRFGRR-------KLLIIGLLLMAICSLILGIIFFLG------VS-----SSSWWSILSI 352 (451)
T ss_pred ccccccccccccc----ccccccccc-------cccccccccccccccccccccccc------cc-----cccccccccc
Confidence 1111111222211 355565554 355566666666665554 11100 00 0000122222
Q ss_pred HHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 462 VPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 462 ~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
+...+..........+..+.+..|..|++.|+++.|+....+.+++.+++.+...+.+
T Consensus 353 ~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~ 410 (451)
T PF00083_consen 353 VFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN 410 (451)
T ss_pred eeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2222222333445678888899999999999999999999999999888888777654
No 92
>PRK09669 putative symporter YagG; Provisional
Probab=99.70 E-value=1.5e-15 Score=163.42 Aligned_cols=175 Identities=15% Similarity=0.157 Sum_probs=120.4
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHh----ccchhHH-HHHHHHHHHHHH
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADA----YLGRYWT-IAIFSIIYVIGM 111 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr----~~Grr~~-~~~~~~~~~~~~ 111 (559)
+..+..+..+..+..+++.|+.+++|++..++|.+..+..+...+..|+.|+++|| + ||||- ++.+.+..+++.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 16 LGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred chhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHHHHHHH
Confidence 34455666666777889999999999999999999999999999999999999999 5 87555 445666666665
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+++... |.. ......+.+++...+.+.+.........++.+|+.++.+ +|.+..++..
T Consensus 95 ~l~f~~---p~~--------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~-----eR~~l~~~r~ 152 (444)
T PRK09669 95 LLTFYT---PDF--------------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPR-----ERHSLQSWRF 152 (444)
T ss_pred HHHHhC---CCC--------------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHH-----HHHHHHHHHH
Confidence 544333 220 111234445555556666666777778899999986543 3888888888
Q ss_pred HHHhHHHHHHhhhhhhhcc-------ccCchhhhHHHHHHHHHHHHHHHh
Q 008623 192 FSINIGALIASSVLVWIQD-------NEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~-------~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
...++|+.+++.+...+.. ..||+..+.+.+++.++..+..++
T Consensus 153 ~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 153 ALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 8888888887765433322 235776666666554444433333
No 93
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.69 E-value=6.5e-15 Score=155.59 Aligned_cols=177 Identities=9% Similarity=-0.094 Sum_probs=121.1
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHH--HHHHHHHHHHhhhHH-HHHhHhccchhHHHHHHHHHH-
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKN--VLDWSGTCYITPLIG-AFLADAYLGRYWTIAIFSIIY- 107 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~--~~~~~~~~~~~~~~~-G~laDr~~Grr~~~~~~~~~~- 107 (559)
...+....+.+.+.+....+.+|.|++ +.|.|..+.|.. ...+.+...+..|+. ++..||+ ||||..++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 344556677777887888899999996 569999999997 466677787788777 5579998 9999976665332
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
......+... .+. ......++....+.++..+...+...++..|..++++ ++.+.
T Consensus 81 ~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~ 135 (390)
T TIGR02718 81 SACLASLALV--GPD-----------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGN 135 (390)
T ss_pred HHHHHHHHcC--Ccc-----------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHH
Confidence 2222222211 011 1112233333444556666666666667777776664 67777
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
+....+..+|..+|+.+.+++.+..||+.+|++.++..++..+..++.
T Consensus 136 ~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 136 AVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 777778889999999888899999999999998887666555544443
No 94
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.69 E-value=4.4e-15 Score=161.23 Aligned_cols=366 Identities=10% Similarity=0.043 Sum_probs=209.0
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhH----hccchhH-HHHHHHHHHHHHH
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLAD----AYLGRYW-TIAIFSIIYVIGM 111 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~-~~~~~~~~~~~~~ 111 (559)
+..+..++.+..+.++++.|+.+.+|+++..+|.+..+..+.-.+..|+.|+++| |+ |||| -++.+.+..++++
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLANSVVL 91 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHHHHHH
Confidence 4556667777778899999999999999999999999999999999999999999 66 9855 5555666666665
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+++... |.. +.......+++...+..++.........++.+|+.++.+ +|.+..++..
T Consensus 92 ~llf~~---p~~--------------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~-----eR~~l~~~~~ 149 (473)
T PRK10429 92 FLLFSA---HLF--------------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKR-----EREQLVPYPR 149 (473)
T ss_pred HHHHcC---CCC--------------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHH-----HHHHHHHHHH
Confidence 555432 210 011123344455556677778888888999999996543 3899888877
Q ss_pred HHHhHHHHHHhhhhhhhcc-------ccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhcc
Q 008623 192 FSINIGALIASSVLVWIQD-------NEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHK 264 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~-------~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (559)
...++|+.+.+.+...+.+ ..+|+....+.+++.++..+..++..|+... ++..++..
T Consensus 150 ~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~-------------- 214 (473)
T PRK10429 150 FFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS-SDNQVSAE-------------- 214 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC-cccccccc--------------
Confidence 7778876666555443321 1245555554544444433333332332110 00000000
Q ss_pred ccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHH
Q 008623 265 VELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGII 344 (559)
Q Consensus 265 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 344 (559)
. +..++++.. +.+.+.|.+...+...+....
T Consensus 215 ----------------------------~--------------------~~~~~~~~~-~~~~~n~~~~~ll~~~~~~~~ 245 (473)
T PRK10429 215 ----------------------------G--------------------SHLTLKDIV-ALIYKNDQLSCLLGMALAYNI 245 (473)
T ss_pred ----------------------------c--------------------cCCCHHHHH-HHHhcCHHHHHHHHHHHHHHH
Confidence 0 000000000 001111223222222222222
Q ss_pred HHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHH
Q 008623 345 FSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFI 424 (559)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~ 424 (559)
..........++.. + ..+. . -....+..+..+..++..++..+ +.+|+++ ++.+.++..+
T Consensus 246 ~~~~~~~~~~y~~~---y---~~~~-~--~~~~~~~~~~~i~~ii~~~~~~~----l~~r~gk-------k~~~~~~~~~ 305 (473)
T PRK10429 246 ASNIINGFAIYYFT---Y---VIGD-A--DLFPYYLSYAGAANLVTLILFPR----LVKSLSR-------RILWAGASIF 305 (473)
T ss_pred HHHHHhhheeeEEE---E---ECCC-H--HHHHHHHHHHHHHHHHHHHHHHH----HHHHcCc-------HHHHHHHHHH
Confidence 22222222111111 1 1110 0 00111222333444455555544 5555443 3455566665
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCC-------hhhHHHHHH
Q 008623 425 SILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAP-------DAMRSLCSA 497 (559)
Q Consensus 425 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P-------~~~rg~~~g 497 (559)
.+++.+........ .+.+.+.+++..++.+++.+...+..++++.|..| ++..|...|
T Consensus 306 ~~~~~~~~~~~~~~---------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 306 PVLSCGVLLLMGLA---------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHHHHhcc---------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 55555444321100 01233445556677889999999999999999977 455777999
Q ss_pred HHHHHHHHHHHHhhHHHHHhhhhhccC
Q 008623 498 LSLTTVALGNYLSSLLVTIVTSISTKN 524 (559)
Q Consensus 498 ~~~~~~~lg~~lg~~l~~~v~~~~~~~ 524 (559)
++.++..+|..+++.+.|.+.+..+.+
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy~ 397 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGYV 397 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998876643
No 95
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.69 E-value=5.7e-16 Score=156.69 Aligned_cols=149 Identities=13% Similarity=0.082 Sum_probs=136.0
Q ss_pred hcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccC
Q 008623 60 QLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVT 139 (559)
Q Consensus 60 ~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (559)
.++-+.++.|++.+...+.+.+..|+.|.+.||+ |+|-.+++|..++..+++++++.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg---------------------- 156 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG---------------------- 156 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc----------------------
Confidence 4566788999999999999999999999999998 99999999999999999999876
Q ss_pred cchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhH
Q 008623 140 DAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFG 219 (559)
Q Consensus 140 ~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~ 219 (559)
+++++++++|.++|+|.++...+..++++|.+|+++ +|++++|+.-....+|-.+||.++|.+.+..|++.+|.
T Consensus 157 -~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~-----er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFl 230 (464)
T KOG3764|consen 157 -NSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDN-----ERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFL 230 (464)
T ss_pred -chhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccch-----hhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHH
Confidence 567889999999999999999999999999999987 59999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccc
Q 008623 220 IPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 220 i~~~~~~i~~~~~~~~~~ 237 (559)
+.+++.++...+-++..+
T Consensus 231 VL~~v~Lld~~L~l~vi~ 248 (464)
T KOG3764|consen 231 VLAIVLLLDGALQLLVIE 248 (464)
T ss_pred HHHHHHHHHHHHHHheeC
Confidence 999888777766555543
No 96
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.69 E-value=8.9e-16 Score=164.45 Aligned_cols=363 Identities=15% Similarity=0.130 Sum_probs=226.9
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhH----hccchhHHHH-HHHHHHHHHHHH
Q 008623 39 ECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLAD----AYLGRYWTIA-IFSIIYVIGMTF 113 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laD----r~~Grr~~~~-~~~~~~~~~~~~ 113 (559)
.+..+..+.....+++.|+.+.+|+++..++.+..+..+...+..|+.|+++| |+ ||||-.+ .+.+..+++.++
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~l 88 (428)
T PF13347_consen 10 DLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFFL 88 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHHH
Confidence 45666666667778999999999999999999999999999999999999999 77 9777655 566777777766
Q ss_pred HhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHH
Q 008623 114 LTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFS 193 (559)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 193 (559)
+... .|.-. +.......+.+..++..++.........++.+|..++.+ +|.+..++....
T Consensus 89 lf~~--~p~~~-------------~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~-----~R~~l~~~~~~~ 148 (428)
T PF13347_consen 89 LFSP--PPAGL-------------SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPD-----ERTRLSSWRMIF 148 (428)
T ss_pred hhcc--ccchh-------------hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHh-----hhhhHHHHHHHH
Confidence 6543 02000 111233445666677788888888999999999998754 399999998888
Q ss_pred HhHHHHHHhhhhhhhcccc-------CchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhcccc
Q 008623 194 INIGALIASSVLVWIQDNE-------GWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVE 266 (559)
Q Consensus 194 ~~iG~~igp~i~~~l~~~~-------g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (559)
..+|..+...+.+.+.+.. +|++...+.+++.++..+...+..|+.+.+.+++++...
T Consensus 149 ~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~~--------------- 213 (428)
T PF13347_consen 149 SMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKIS--------------- 213 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccccccc---------------
Confidence 8888876655555444322 577777766665555555544444441110000000000
Q ss_pred CCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 008623 267 LPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFS 346 (559)
Q Consensus 267 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 346 (559)
....++ ...+.|.+...+...+.. +
T Consensus 214 -----------------------------------------------~~~~~~-----~~~~nr~~~~l~~~~~~~---~ 238 (428)
T PF13347_consen 214 -----------------------------------------------LRDSLR-----SLFRNRPFRILLLAFFLQ---W 238 (428)
T ss_pred -----------------------------------------------cccchh-----hhcccchHHHHHHHHHHH---H
Confidence 000000 001111122222122222 1
Q ss_pred HHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHH
Q 008623 347 AVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISI 426 (559)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~ 426 (559)
.......+...+... ..++.+ -..+.+.....+..++..|+..+ +.+|+++| +.+..+.++.+
T Consensus 239 ~~~~~~~~~~~y~~~---~vl~~~---~~~~~~~~~~~~~~~v~~~~~~~----l~~r~gk~-------~~~~~~~~~~~ 301 (428)
T PF13347_consen 239 LAFALMNTFLPYYFT---YVLGNE---GLISIFMLIFFVASIVGSPLWGR----LSKRFGKK-------KVYIIGLLLAA 301 (428)
T ss_pred hhhhhhhhHHHHHHH---HHhcCc---hhhHHHHHHHHHHHHHHHHHHHH----HHHHccce-------eehhhhHHHHH
Confidence 222212222121111 111100 00112222333444445555544 56665444 46777888888
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCCh-------hhHHHHHHHH
Q 008623 427 LSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPD-------AMRSLCSALS 499 (559)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~-------~~rg~~~g~~ 499 (559)
++.++..+... .+.+++.+..++.+++.+...+..+++..|..+. +..|...|++
T Consensus 302 ~~~~~~~~~~~------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~ 363 (428)
T PF13347_consen 302 LGFLLLFFLGP------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVN 363 (428)
T ss_pred HHHHHHHHHHh------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhh
Confidence 87777666532 2566777888999999999999999999998883 4579999999
Q ss_pred HHHHHHHHHHhhHHHHHhhhhhccCCCC
Q 008623 500 LTTVALGNYLSSLLVTIVTSISTKNGNL 527 (559)
Q Consensus 500 ~~~~~lg~~lg~~l~~~v~~~~~~~~~~ 527 (559)
+....++..+++.+.+.+.+..+.+.+.
T Consensus 364 ~~~~k~~~~la~~i~g~~l~~~Gy~~~~ 391 (428)
T PF13347_consen 364 SFFIKIGQGLAGAIVGLLLALVGYDANA 391 (428)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhCcCCCc
Confidence 9999999999999999998877655443
No 97
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.68 E-value=5.9e-16 Score=173.10 Aligned_cols=202 Identities=17% Similarity=0.188 Sum_probs=147.5
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
+|.+.+.+....+.+....++......-+++++++++++.|++.+.+.+++.++.++.|+++||+ ||||.+.++.++++
T Consensus 31 ~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~~ 109 (633)
T TIGR00805 31 IKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIMG 109 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHHH
Confidence 44333333334444555555666666677889999999999999999999999999999999998 99999999999999
Q ss_pred HHHHHHhhhhccCC-C----------------CCCCCCCCCCc--------cccc-C--cchhHHHHHHHHHHHHhccCC
Q 008623 109 IGMTFLTVTASVSG-L----------------KPVCHGPRGEE--------TCQV-T--DAQSATFFVALYLIALGTGGI 160 (559)
Q Consensus 109 ~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~--------~~~~-~--~~~~~~~~~~~~l~g~g~g~~ 160 (559)
++.+++++...+.. + .+.|......+ .|+. + +.....++++|+++|+|.+..
T Consensus 110 lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~ 189 (633)
T TIGR00805 110 LGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPI 189 (633)
T ss_pred HHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcc
Confidence 99998876532110 0 00121000000 0110 0 113556789999999999999
Q ss_pred CcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcccc----------------------Cchhhh
Q 008623 161 KPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNE----------------------GWGWGF 218 (559)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~----------------------g~~~~f 218 (559)
.+...+++.|.+|+++ |+...++++.+..+|..+|+++++++.+.+ +|+..|
T Consensus 190 ~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~F 263 (633)
T TIGR00805 190 FPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGF 263 (633)
T ss_pred hhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHH
Confidence 9999999999999987 999999999999999999999999876532 267778
Q ss_pred HHHHHHHHHHHHHHHhccc
Q 008623 219 GIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 219 ~i~~~~~~i~~~~~~~~~~ 237 (559)
++.+++.++..+.+++..+
T Consensus 264 li~g~l~~l~~v~l~~~p~ 282 (633)
T TIGR00805 264 LICGGVALLTSIPFFFFPK 282 (633)
T ss_pred HHHHHHHHHHHHHHHhCcc
Confidence 8777666555544444433
No 98
>PRK09848 glucuronide transporter; Provisional
Probab=99.66 E-value=1.5e-14 Score=155.91 Aligned_cols=359 Identities=9% Similarity=0.025 Sum_probs=196.3
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc---cchhHHH-HHHHHHHHHHHH
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY---LGRYWTI-AIFSIIYVIGMT 112 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~-~~~~~~~~~~~~ 112 (559)
...+..+..+....++++.|+++.+|++..++|.+.+...+...+..|+.|+++||. +||||.. ..+.+...+..+
T Consensus 15 ~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~ 94 (448)
T PRK09848 15 LGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSV 94 (448)
T ss_pred cchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHH
Confidence 455666777777778888999999999999999999999999999999999999994 2666655 455554444443
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
++... |... ......+..++...+.+++.+...+...++..++.++.+ +|.+..++..+
T Consensus 95 ~~~~~---~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-----~r~~~~~~r~~ 153 (448)
T PRK09848 95 LVFWV---PTDW-------------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQ-----SRARLGAARGI 153 (448)
T ss_pred HHHhC---cCCC-------------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHH-----HHHHHHHHHHH
Confidence 33211 1100 011123334445566788888888888888888777644 37776665544
Q ss_pred H-----HhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccC
Q 008623 193 S-----INIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVEL 267 (559)
Q Consensus 193 ~-----~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (559)
+ .+++..++|.+.+.........+..+. .++.+++++..+......+++.+++.+.....+
T Consensus 154 ~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~------------- 219 (448)
T PRK09848 154 AASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVAQPSLKI------------- 219 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCccCCCHHH-------------
Confidence 3 345666667665533221111111111 122222222222111111110000000000000
Q ss_pred CCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008623 268 PADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSA 347 (559)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 347 (559)
.+ +.+.+.|.+.... +...+.+.
T Consensus 220 -------------------------------------------------~~-----~~l~~n~~f~~~~---~~~~~~~~ 242 (448)
T PRK09848 220 -------------------------------------------------SL-----QTLKRNRPLFMLC---IGALCVLI 242 (448)
T ss_pred -------------------------------------------------HH-----HHHhCCchHHHHH---HHHHHHHH
Confidence 00 0001112222111 11111222
Q ss_pred HhcccchhhhhccccccCCCCCccceeCcc--cccccc-ceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHH
Q 008623 348 VYSQMSSLFVLQGERMDTHVGNSSFKIPPA--SLSIFD-TLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFI 424 (559)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~ 424 (559)
.+........+ +.+..++ .++. .+...+ .+..++..++..+ +.+| .++++.+.+|.++
T Consensus 243 ~~~~~~~~~~~---~~~~~~g-----~~~~~~~~~~~~~~~~~~~~~~l~~~----l~~r-------~g~~~~~~~g~~~ 303 (448)
T PRK09848 243 STFAVSASSLF---YVRYVLN-----DTGLFTVLVLVQNLVGTVASAPLVPG----MVAR-------IGKKNTFLIGALL 303 (448)
T ss_pred HHHHHhhhhee---eEeeecC-----ChHHHHHHHHHHHHHHHHHHHHHHHH----HHHH-------hCcHHHHHHHHHH
Confidence 22222221111 1111222 1111 011111 2223333444443 4444 3444677788888
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChh-------hHHHHHH
Q 008623 425 SILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDA-------MRSLCSA 497 (559)
Q Consensus 425 ~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~-------~rg~~~g 497 (559)
.+++.+.+.+... .+.+...+..++.++|+++..+..+++..+..|.+ .+|..+|
T Consensus 304 ~~i~~~~~~~~~~------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 304 GTCGYLLFFWVSV------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHHHHHHcCc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 7777766554210 24445556678889999999999999999988754 4699999
Q ss_pred HHHHHHHHHHHHhhHHHHHhhhhhccC
Q 008623 498 LSLTTVALGNYLSSLLVTIVTSISTKN 524 (559)
Q Consensus 498 ~~~~~~~lg~~lg~~l~~~v~~~~~~~ 524 (559)
++++.+.+|..+++.+.+.+.+..+.+
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~G~~ 392 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLSGYI 392 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998776644
No 99
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.65 E-value=1.7e-14 Score=157.19 Aligned_cols=149 Identities=18% Similarity=0.241 Sum_probs=118.0
Q ss_pred hHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCC
Q 008623 52 NLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPR 131 (559)
Q Consensus 52 ~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (559)
....++.+++|-+ ....|+...+.+...+..++.|.++|.+ |||+.++.+.++.++|.+..+.+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA-------------- 128 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA-------------- 128 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC--------------
Confidence 3446788889865 5567888889999999999999999998 99999999999999999998766
Q ss_pred CCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc
Q 008623 132 GEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN 211 (559)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~ 211 (559)
++...++.+..+.|+|.|... .....++|..|.+. |..+.++.....-+...++|.++..+..+
T Consensus 129 ---------~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~ 192 (599)
T PF06609_consen 129 ---------QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAH 192 (599)
T ss_pred ---------CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccC
Confidence 457778999999999977664 34555899999876 77766665555555555677777666667
Q ss_pred cCchhhhHHHHHHHHHHHHHH
Q 008623 212 EGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 212 ~g~~~~f~i~~~~~~i~~~~~ 232 (559)
.+|||.|++.++...++++..
T Consensus 193 ~~WRw~~~~~~i~~~i~~vl~ 213 (599)
T PF06609_consen 193 SGWRWIFYIFIIWSGIALVLI 213 (599)
T ss_pred CCcchHHHHHHHHHHHHHHHH
Confidence 789999999887766665543
No 100
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.64 E-value=9.2e-14 Score=146.99 Aligned_cols=350 Identities=13% Similarity=0.084 Sum_probs=191.9
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhh
Q 008623 39 ECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTA 118 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 118 (559)
.++....+-...++++.|+++ .|+|..|.|.+.+...+...+++++.|+++||...+||.+.+..++..+........
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~- 88 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFS- 88 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHh-
Confidence 334444444556889999975 779999999999999999999999999999998346777766666555544444332
Q ss_pred ccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHH
Q 008623 119 SVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGA 198 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~ 198 (559)
.+.+.+++..++..+......|...++..+...+ ++.-++-...-..+|-
T Consensus 89 ----------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRlwGSiGf 138 (400)
T PF03825_consen 89 ----------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRLWGSIGF 138 (400)
T ss_pred ----------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchhhhhHHH
Confidence 3355566666666777666667777776666653 2334444444555666
Q ss_pred HHHhhh-hhhhcccc---CchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccchh
Q 008623 199 LIASSV-LVWIQDNE---GWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSLL 274 (559)
Q Consensus 199 ~igp~i-~~~l~~~~---g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 274 (559)
+++... ++++.... +..+.+++.+...++.....+..++ .+.++..+++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~-~~~~~~~~~~~~~----------------------- 194 (400)
T PF03825_consen 139 IVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPK-TPPKRSAKESVKK----------------------- 194 (400)
T ss_pred HHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCC-CccccccCCCccc-----------------------
Confidence 555432 22232222 2234455555433322222222221 1100000000000
Q ss_pred hhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 008623 275 YETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSS 354 (559)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (559)
..++ +..++-+.|++...+...+........+..+.+
T Consensus 195 -----------------------------------------~~~~--~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~ 231 (400)
T PF03825_consen 195 -----------------------------------------LLGL--DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFS 231 (400)
T ss_pred -----------------------------------------ccch--HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000011112222111111111211222222222
Q ss_pred hhhhccccccCCCCCcccee-CccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 008623 355 LFVLQGERMDTHVGNSSFKI-PPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAA 433 (559)
Q Consensus 355 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~ 433 (559)
.+.. +. | ++.. ..+...++..+.-+.... +.+|+.+| ++..+.+.++.+..++=+.+++
T Consensus 232 ~yl~------~~-g--g~~~~~~g~~~~l~~~aEi~~f~--------~~~~~~~r---~g~~~ll~~a~~~~~vR~~l~a 291 (400)
T PF03825_consen 232 IYLQ------EL-G--GYSGSTIGILWALGVVAEIPFFF--------FSGRFLKR---FGIKWLLLLALVAYAVRWLLYA 291 (400)
T ss_pred HHHH------Hc-c--cchhhHHHHHHHHHHHHHHHHHH--------HHHHHHHh---cCHHHHHHHHHHHHHHHHHHHH
Confidence 2221 11 1 1100 011111222222222222 22333333 6677788899999988888887
Q ss_pred HHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHH-HHHHHHHHHhhH
Q 008623 434 VLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSL-TTVALGNYLSSL 512 (559)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~ 512 (559)
....+ .............+.|+..++.......++.+.+|++.|++++|+++ +..++|+.+|++
T Consensus 292 ~~~~~---------------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~ 356 (400)
T PF03825_consen 292 YFSDP---------------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSL 356 (400)
T ss_pred HhcCC---------------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHH
Confidence 65210 00111122333467999999999999999999999999999999998 467999999999
Q ss_pred HHHHhhhhhc
Q 008623 513 LVTIVTSIST 522 (559)
Q Consensus 513 l~~~v~~~~~ 522 (559)
++|++.|..+
T Consensus 357 igG~l~~~~g 366 (400)
T PF03825_consen 357 IGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHhc
Confidence 9999998655
No 101
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.62 E-value=5e-14 Score=148.22 Aligned_cols=155 Identities=12% Similarity=0.028 Sum_probs=135.7
Q ss_pred hhhHHHHHhhhcCCChhh-hHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC
Q 008623 50 STNLVRYFKHQLDQSSST-ASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCH 128 (559)
Q Consensus 50 ~~~l~~yl~~~lg~s~~~-~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (559)
.++...|+.+++|++..+ .|.+.+++..++.++.+++|+++||+ |.|+++.++.+...+..++++++
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa----------- 112 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLG----------- 112 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH-----------
Confidence 456777999999999999 99999999999999999999999998 99999999999999999998887
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhh
Q 008623 129 GPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWI 208 (559)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l 208 (559)
.+...+.+.|++.|++.|... +...++..++|+++ |+++.++.+.+..+|.++++++++++
T Consensus 113 ------------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 113 ------------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999999999 99999999999987 99999999999999999999999984
Q ss_pred ccccCchhh---hHHHHHHHHHHHHHHHhcc
Q 008623 209 QDNEGWGWG---FGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 209 ~~~~g~~~~---f~i~~~~~~i~~~~~~~~~ 236 (559)
..+||++- .+++.....+++++.++.+
T Consensus 174 -~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 174 -VTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred -HhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 46788854 3455555566666655554
No 102
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.62 E-value=2.1e-14 Score=157.85 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=124.6
Q ss_pred hhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccccc
Q 008623 59 HQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQV 138 (559)
Q Consensus 59 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (559)
+..+.+........+++.++..+++++.|.++||+ |||++++.+.++.+++.+..+++
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a--------------------- 168 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA--------------------- 168 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh---------------------
Confidence 45667778888999999999999999999999996 99999999999999998888877
Q ss_pred CcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhh
Q 008623 139 TDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGF 218 (559)
Q Consensus 139 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f 218 (559)
.+.+.+.+.|++.|++.++...+...+++|++++++ |+.+..+ ......++.++|.+++++.. +||+.+
T Consensus 169 --~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~ 237 (521)
T KOG0255|consen 169 --PNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLF 237 (521)
T ss_pred --CcHHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHH
Confidence 568899999999999999999999999999999997 9999999 77888888889988888877 799999
Q ss_pred HHHHHHHHHHHHH
Q 008623 219 GIPAVAMAIAVVS 231 (559)
Q Consensus 219 ~i~~~~~~i~~~~ 231 (559)
++..+..++.++.
T Consensus 238 ~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 238 WIISIPSGLFLLL 250 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 9887766655554
No 103
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1e-13 Score=150.38 Aligned_cols=399 Identities=13% Similarity=0.062 Sum_probs=238.5
Q ss_pred hhHhhHHHHHHHHHHhhh---hhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMS---TNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|..++..|..++..+++. ..+-..++++++.+.++++|+.++......+..|+.+.+.||+ |.|.+++.|.++..+
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~~ 123 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAAL 123 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHHH
Confidence 777788888888777774 3455667788999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHH-HHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVAL-YLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
+.++..++ .+.+.+++.. ++.|+|.++.......++..+|+++ |+.+.|
T Consensus 124 g~~lssF~-----------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~G 173 (509)
T KOG2504|consen 124 GLLLSSFA-----------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATG 173 (509)
T ss_pred HHHHHHHH-----------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHh
Confidence 99999887 3466565555 5579999999999999999998876 999999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCC
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELP 268 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (559)
+...+..+|..+=|.+..++.+.+|||..+++.+...+-.++.....++.....++. ..++... ......
T Consensus 174 ia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~~~~~~ 243 (509)
T KOG2504|consen 174 IAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------SAASVE 243 (509)
T ss_pred hhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------cccccc
Confidence 999999999999999999999999999999888766655554444444322222111 0000000 000000
Q ss_pred CccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCcc-cc---chhhHHHHHHHHH-HHHHHHHHH
Q 008623 269 ADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWR-LC---TVTQVEELKAIVR-LLPIWATGI 343 (559)
Q Consensus 269 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~v~~~~~~~~-~~~~~~~~~ 343 (559)
... ...+. +...++....+ .........+ ....+. ...+.+ .. ..+..++ +.++. .+...+...
T Consensus 244 ~~~-~~~~~------~~~~~~~~~~~-~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~d~~ll~~-~~fl~~~~~~~~~~~ 312 (509)
T KOG2504|consen 244 STP-KPVEL------RISERDSGLKK-LSLSNLATLK-RGPDKW-RNSPLQAFLSMLDLSLLKD-PKFLLLALSNLFAYL 312 (509)
T ss_pred ccc-ccccc------ccccCCCCCCc-ccccchhhhh-hCCccc-cccchhhhhhhhhHHHHcC-chHHHHHHHHHHHHH
Confidence 000 00000 00000000000 0000000000 000000 000110 00 0111111 22221 122222222
Q ss_pred HHHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHH
Q 008623 344 IFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLF 423 (559)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~ 423 (559)
.+...+..++.... ....+++ .......+..+.-+++.++.+. +.++.. ........++++
T Consensus 313 g~~~p~~~l~~~~~--~~g~~~~--------~aa~l~Siigi~~i~gRi~~G~----laD~~~-----~~~~~~~~~~ll 373 (509)
T KOG2504|consen 313 GFNVPFVYLPSYAK--SLGLSSN--------DAAFLLSIIGVSDIIGRIILGL----LADKPG-----IRALVLFLLTLL 373 (509)
T ss_pred HHHHHHHHHHHHHh--hcCCChh--------hhHHHHHHHHHhhhhhhhhhhh----hcCccc-----cchHHHHHHHHH
Confidence 22222222111111 0111111 1112223334444445555544 222211 123334455666
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHH
Q 008623 424 ISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTV 503 (559)
Q Consensus 424 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~ 503 (559)
+.+++.+..... .+.+.++...++.|+..+.........+.+..+.+.-..+.|+..+.+
T Consensus 374 ~~gl~~~~~p~~--------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~ 433 (509)
T KOG2504|consen 374 IAGLARLFLPFA--------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQ 433 (509)
T ss_pred HHHHHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHh
Confidence 666655444442 255566667788889888888888889999999999999999999999
Q ss_pred HHHHHHhhHHHHHhhhhhc
Q 008623 504 ALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 504 ~lg~~lg~~l~~~v~~~~~ 522 (559)
+++..+|+.+.|.+.+.++
T Consensus 434 gi~~l~gpPiag~~~d~tg 452 (509)
T KOG2504|consen 434 GIGALVGPPIAGLLYDITG 452 (509)
T ss_pred HHHHHcCcccceeeeeccC
Confidence 9999999999998877655
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.60 E-value=1.5e-13 Score=148.86 Aligned_cols=378 Identities=15% Similarity=0.097 Sum_probs=215.3
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccc-----hhHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLG-----RYWTIAIFSI 105 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~~~~~~ 105 (559)
.+.++....+...+. +.+...++.++++++|++.++.+.+.+...+...+ .+++|.++||+ + ||+.++++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhc-CCCCccchHHHHHHHH
Confidence 344555567788887 77778888999999999999999888888888777 55599999998 7 7777777766
Q ss_pred HHH-HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccc
Q 008623 106 IYV-IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKS 184 (559)
Q Consensus 106 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 184 (559)
+.. ++...+... ........+.+++.+++.+.......++..|..+ +++ ..++
T Consensus 104 l~~~~~~~~l~~~----------------------~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~---~~~~ 157 (468)
T TIGR00788 104 LGSAILYGLLPGK----------------------VSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESP---SAGP 157 (468)
T ss_pred HHHHHHHHhcccc----------------------cchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCC---CcCC
Confidence 542 222222111 1223333446778899999999999999999998 431 1233
Q ss_pred cchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccc-cCCCCChhHHHHHHHHHHHhhc
Q 008623 185 SFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRN-QKPGGSPLTRICQVVAASIRKH 263 (559)
Q Consensus 185 ~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 263 (559)
...++.+...++|..+|+.++|.+.+..+|+..|++.++..++..+...+. ++.++ ..++..+....
T Consensus 158 ~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~-~E~~~~~~~~~~~~~~~----------- 225 (468)
T TIGR00788 158 SLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLS-KERRAFVRPRIGTYLEM----------- 225 (468)
T ss_pred CeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhc-ccccccccccccccchh-----------
Confidence 345566666789999999999999999999999998877666654333333 22111 01110000000
Q ss_pred cccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHH
Q 008623 264 KVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGI 343 (559)
Q Consensus 264 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 343 (559)
+.. .......+.... .++ ........|.+...+.+.+..
T Consensus 226 -----------~~~--------------------~~~~~~~~~~~~-------~~~--~l~~~l~~~~i~~~l~fifl~- 264 (468)
T TIGR00788 226 -----------NMA--------------------LLTLGVLANVKV-------QIL--GLRGAIQLLEIAKPLIFIFLS- 264 (468)
T ss_pred -----------hhh--------------------hhhhhHHHHHHH-------HHH--HHHHHHhcHHHHHHHHHHHHH-
Confidence 000 000000000000 000 000001112222211111110
Q ss_pred HHHHHhcccc-hhhhhccccccCCCCCccceeCccc---cccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHH
Q 008623 344 IFSAVYSQMS-SLFVLQGERMDTHVGNSSFKIPPAS---LSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMG 419 (559)
Q Consensus 344 ~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~ 419 (559)
+....... ..+... ...+| .++.. ......+..+++..+.++ +.+| .+.++.+.
T Consensus 265 --~~~~~~~~~~~f~~~----~~~lG-----~s~~~~G~~~~~~~v~~i~g~~~~~~--------~~~~---~~~r~~l~ 322 (468)
T TIGR00788 265 --YANLPGASGSVFCAT----TQCLP-----GGPSFSGMSKVVGNLGSLCGVGGYDR--------FLKT---FPYRLLFG 322 (468)
T ss_pred --HhhcCCCCceeEEEE----cccCC-----CCcchhhhHHHHHHHHHHHHHHHHHH--------HHhh---CCHHHHHH
Confidence 11111111 111111 11223 22222 222333333444444433 3333 56666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHH
Q 008623 420 IGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALS 499 (559)
Q Consensus 420 ~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~ 499 (559)
++.++.+++.+........ -|- .....+.+++....++.+++.++.......++.+.+|++.+|+..|+.
T Consensus 323 ~~~~l~~~~~~~~~~l~~~------~~~----~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~ 392 (468)
T TIGR00788 323 VTTLLYTLSSLFDLILVKR------WNL----AFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALL 392 (468)
T ss_pred HHHHHHHHHHhCceeeeec------ccc----ccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHH
Confidence 7777777666443211100 000 000012233444557777777888888899999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHhhhhhc
Q 008623 500 LTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 500 ~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
+...++|+.+++.+++.+.+..+
T Consensus 393 ~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 393 ASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999987644
No 105
>PRK11462 putative transporter; Provisional
Probab=99.59 E-value=2.3e-13 Score=147.25 Aligned_cols=176 Identities=11% Similarity=0.155 Sum_probs=124.6
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHh---ccchhHHHHH-HHHHHHHHHH
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADA---YLGRYWTIAI-FSIIYVIGMT 112 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr---~~Grr~~~~~-~~~~~~~~~~ 112 (559)
...+..+..+..+..++..|..+.+|+++..+|.+..+.-+.-.+..|+.|+++|| .+||||..++ +.+.++++.+
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 45556667777777889999999999999999999999999999999999999997 2498776665 5566666666
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
++... |.. +.......+.+.-.+..++.........++.+|+.++.+ +|.+..++...
T Consensus 96 llf~~---p~~--------------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~-----eRt~l~s~r~~ 153 (460)
T PRK11462 96 LAYST---PDL--------------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPT-----QRISLQSWRFV 153 (460)
T ss_pred HHHhC---CCC--------------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHH-----HHHHHHHHHHH
Confidence 55433 220 111223344555556677888888888999999998765 49999999999
Q ss_pred HHhHHHHHHhhhhhhhccc-------cCchhhhHHHHHHHHHHHHHHHh
Q 008623 193 SINIGALIASSVLVWIQDN-------EGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~-------~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+.++|+.+++.+...+... .||+....+.+++.+++....+.
T Consensus 154 ~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 154 LATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888887665444332 24665554444444444433333
No 106
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.56 E-value=6.8e-13 Score=133.51 Aligned_cols=343 Identities=15% Similarity=0.184 Sum_probs=229.3
Q ss_pred HhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHH
Q 008623 35 ILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFL 114 (559)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 114 (559)
+.++.+-.+...-++-+.+ .-+++++|+|.+.+|.+++...++..+..|+..+++.|+ |..+.+..++++.+++...=
T Consensus 17 Ivlia~NLR~~itsvgPLL-~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR 94 (395)
T COG2807 17 IVLIAFNLRPAITSVGPLL-DEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIR 94 (395)
T ss_pred HHHHHhccchhhhhhhhhH-HHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHH
Confidence 3344444555555554444 567889999999999999999999999999999999998 99999999999888887654
Q ss_pred hhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHH
Q 008623 115 TVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSI 194 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 194 (559)
.. .+...++.+-.+.|.|.+..+...++.+.+.||++ -+..++.|..+.
T Consensus 95 ~~------------------------~~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl 143 (395)
T COG2807 95 SL------------------------GGLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSL 143 (395)
T ss_pred hc------------------------ccHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHH
Confidence 32 23566888899999999999999999999999988 588999999999
Q ss_pred hHHHHHHhhhhhhhcccc-CchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccCCCccch
Q 008623 195 NIGALIASSVLVWIQDNE-GWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVELPADKSL 273 (559)
Q Consensus 195 ~iG~~igp~i~~~l~~~~-g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (559)
++|+.+++.+...+.++. ||+..+..-+...+++++..+--. .|++.+..+... .
T Consensus 144 ~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~--~r~~~~~~~~~~----------------~------ 199 (395)
T COG2807 144 GAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQA--LREQAASIATKL----------------V------ 199 (395)
T ss_pred HHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhc--cccccccccccc----------------c------
Confidence 999999999998888877 699998888877766665443221 111100000000 0
Q ss_pred hhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 008623 274 LYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMS 353 (559)
Q Consensus 274 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (559)
. ..+-|++ .......+.+=+...++|..+.+++
T Consensus 200 ------------------------------------~---~~~vw~~--------~~aW~vtLfmGlqS~~~Y~~~~WLP 232 (395)
T COG2807 200 ------------------------------------S---VRKVWRS--------PLAWQVTLFMGLQSLLYYIVIGWLP 232 (395)
T ss_pred ------------------------------------c---ccccccC--------chhHHHHHHHHhhHHHHHHHHHHHH
Confidence 0 0111210 0011112223355677788888888
Q ss_pred hhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHH
Q 008623 354 SLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAA 433 (559)
Q Consensus 354 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~ 433 (559)
.++.++...-.+. | ...+.. .+..+..-+..|. +.+|. .+.+........++.+++..+.
T Consensus 233 ~ili~~G~sa~~a-G-----~llsl~-~l~~~~~~ll~P~-------la~R~------~n~r~~~~~~~~~~l~G~~G~~ 292 (395)
T COG2807 233 AILIDRGLSAAEA-G-----SLLSLM-QLAQLPTALLIPL-------LARRS------KNQRPLVVLALLLMLVGLVGLL 292 (395)
T ss_pred HHHHHcCCCHHHh-h-----hHHHHH-HHHHHHHHHHHHH-------HHHHh------cccchHHHHHHHHHHHHHHHHH
Confidence 8777653321111 1 000111 1111111222222 22331 1233455556666777776666
Q ss_pred HHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCC-hhhHHHHHHHHHHHHHHHHHHhhH
Q 008623 434 VLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAP-DAMRSLCSALSLTTVALGNYLSSL 512 (559)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~lg~~ 512 (559)
+...+ ..++| .++.|+|.+..+|....++...++ ++..+..+|+.+..+.+=...||.
T Consensus 293 ~~P~~-----------------~~~lw----~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~ 351 (395)
T COG2807 293 LAPGQ-----------------LPILW----ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPW 351 (395)
T ss_pred Hhhhh-----------------HHHHH----HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhh
Confidence 54322 23333 488899999999999998887766 555677888888888888999999
Q ss_pred HHHHhhhhhc
Q 008623 513 LVTIVTSIST 522 (559)
Q Consensus 513 l~~~v~~~~~ 522 (559)
+.|.+.|.++
T Consensus 352 l~G~lhDa~g 361 (395)
T COG2807 352 LFGFLHDATG 361 (395)
T ss_pred hHhHHHHhcC
Confidence 9999999776
No 107
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.55 E-value=9.1e-13 Score=134.49 Aligned_cols=150 Identities=17% Similarity=0.160 Sum_probs=126.2
Q ss_pred hHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHH
Q 008623 34 FILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTF 113 (559)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~ 113 (559)
..+...|+...........+...+++.++.+..+++.+...+..++.++.+..|++.+|+ |+|+.+++|+.+++++..+
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~l 94 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAAL 94 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence 333344444444445567788889999999999999999999999999999999999999 9999999999999999887
Q ss_pred HhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHH
Q 008623 114 LTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFS 193 (559)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 193 (559)
..-+ ....++..+++++++.+.|.+.....++++++.+.+++. ..+-+++.+..
T Consensus 95 F~pA--------------------a~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~f 148 (422)
T COG0738 95 FWPA--------------------ASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAF 148 (422)
T ss_pred Hhhh--------------------hhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHh
Confidence 7644 223567788999999999999999999999999999875 45567778888
Q ss_pred HhHHHHHHhhhhhhhcc
Q 008623 194 INIGALIASSVLVWIQD 210 (559)
Q Consensus 194 ~~iG~~igp~i~~~l~~ 210 (559)
..+|++++|++++++..
T Consensus 149 n~lGa~~gp~~g~~lil 165 (422)
T COG0738 149 NGLGAILGPLLGSSLIL 165 (422)
T ss_pred hhhHHHHHHHHHHHHHH
Confidence 89999999999998876
No 108
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.54 E-value=9.2e-14 Score=143.12 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=94.3
Q ss_pred CChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcch
Q 008623 63 QSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQ 142 (559)
Q Consensus 63 ~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (559)
+++...+.+.++..++..+++++.||++||+ |||+++-..+++++++++.+++....+. ...-
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~~~~----------------~~~~ 143 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVGTTS----------------PLGV 143 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCCCCC----------------Ccch
Confidence 6677788999999999999999999999998 9999999999999999987765532221 2234
Q ss_pred hHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHh
Q 008623 143 SATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIAS 202 (559)
Q Consensus 143 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp 202 (559)
++++...|+++|+|.|+-.|...+..+|...++. |+...+......+.|...|.
T Consensus 144 m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ 197 (538)
T KOG0252|consen 144 MMTLCFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGG 197 (538)
T ss_pred hhHHHHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhcc
Confidence 7789999999999999999999999999887775 88877765555555444444
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.54 E-value=3.9e-13 Score=140.59 Aligned_cols=365 Identities=10% Similarity=-0.002 Sum_probs=201.7
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH-HHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII-YVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~-~~~ 109 (559)
..|......+.....+-...++++.+++++.|++.++.|.+.++..+...+.+|+.|.++||+ |.||-++....+ ..+
T Consensus 8 ~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~~l 86 (412)
T PF01306_consen 8 NYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILLLL 86 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHHHH
Confidence 466666677777777777789999999999999999999999999999999999999999998 966655443322 221
Q ss_pred -HHHHH-hhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 110 -GMTFL-TVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 110 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
+-+.. ... |.. ...+.++.++.++..+.......+.. |..-++. +++.+-=+
T Consensus 87 ~~pff~~v~~---pll-------------------~~n~~lg~iig~i~l~~~f~~~~~~~-Ea~~er~---sr~~~feY 140 (412)
T PF01306_consen 87 FGPFFIYVFG---PLL-------------------QSNFWLGAIIGGIYLGLVFNAGVPLS-EAYAERV---SRRNGFEY 140 (412)
T ss_dssp CHHHHHHTHH---HHH-------------------HTT-HHHHHHTTTTTTTTTTTHHHHH-HHHHHHH---HHHHSS-H
T ss_pred HHHHHHHHHH---HHH-------------------HHHHHHHHHHHHHHHHHHHcccchHH-HHHHHHH---HHHhcCCc
Confidence 22222 111 100 01123333333444444333332222 3222221 11112223
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHHHHHHHHHHhhccccC
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRICQVVAASIRKHKVEL 267 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (559)
|-..+-..+|.+++..++|.+.+ .+-+..|++.....++..++.++.++...++.+. .+..
T Consensus 141 G~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~-~~~~----------------- 201 (412)
T PF01306_consen 141 GRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEV-ADAL----------------- 201 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-S-STTS-----------------
T ss_pred chHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhh-hccc-----------------
Confidence 44566778999999999998876 4556778866554444443333332211111000 0000
Q ss_pred CCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 008623 268 PADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSA 347 (559)
Q Consensus 268 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 347 (559)
.. +..+.......++.+.|++...+.+.....+.|-
T Consensus 202 ------------------------~~--------------------~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~ 237 (412)
T PF01306_consen 202 ------------------------GA--------------------KKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYD 237 (412)
T ss_dssp ------------------------SS--------------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------cc--------------------CCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 00 0000000000011122344444434444444444
Q ss_pred H-hcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHH
Q 008623 348 V-YSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISI 426 (559)
Q Consensus 348 ~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~ 426 (559)
. .+|++.++...-. +.. .....+...+.+.+++=.+... ...++.+| .+.+..+.++..+++
T Consensus 238 vfdqqf~~y~~~~f~--~~~-------~g~~~~G~l~s~~v~~E~~~m~-~~p~li~r-------ig~k~~Lllag~i~~ 300 (412)
T PF01306_consen 238 VFDQQFPIYFASFFQ--SAG-------QGNQMYGYLWSVQVFLEALMMF-FSPWLINR-------IGAKNLLLLAGVIMA 300 (412)
T ss_dssp HHHHHHHHHHHHTSS--SHH-------HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH-------H-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc--ccc-------cChhHHhHHHHHHHHHHHHHHH-HHHHHHHh-------cChHhHHHHHHHHHH
Confidence 4 4454443332111 111 1111222222222222222221 12235555 455567778888888
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHH-HHHHHH
Q 008623 427 LSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALS-LTTVAL 505 (559)
Q Consensus 427 i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~-~~~~~l 505 (559)
+=.+..++.+ +++++++.-.+.++-..+......-|+.+..|++..++...+. +...++
T Consensus 301 iRi~~~~~~~--------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~ 360 (412)
T PF01306_consen 301 IRIIGSGFAT--------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQI 360 (412)
T ss_dssp HHHHHHHT----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHH
T ss_pred HHHHHHhhhc--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHH
Confidence 8877777643 6677777779999988889999999999999999999999886 599999
Q ss_pred HHHHhhHHHHHhhhhhc
Q 008623 506 GNYLSSLLVTIVTSIST 522 (559)
Q Consensus 506 g~~lg~~l~~~v~~~~~ 522 (559)
|..+.+.+.|.+.|..+
T Consensus 361 ~~~i~s~~~G~lyd~~G 377 (412)
T PF01306_consen 361 GIIILSPLAGYLYDRIG 377 (412)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHhhHhhcC
Confidence 99999999999988654
No 110
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.50 E-value=4e-12 Score=127.46 Aligned_cols=182 Identities=13% Similarity=0.066 Sum_probs=133.7
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhh
Q 008623 39 ECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTA 118 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 118 (559)
..+......+....+..-++..+|++..+..++......+..++...+|.++|++ ||||...+......+..+.-...
T Consensus 86 gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~s- 163 (528)
T KOG0253|consen 86 GWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGAS- 163 (528)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcCC-
Confidence 3444444445555555666778899999999999999999999999999999999 99999988776655544444333
Q ss_pred ccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHH
Q 008623 119 SVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGA 198 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~ 198 (559)
.++..+.+.|.+.|+|.|+ .|...++-.|..|..+ |....-.. ....+|.
T Consensus 164 ----------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~ 213 (528)
T KOG0253|consen 164 ----------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQ 213 (528)
T ss_pred ----------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHH
Confidence 5677899999999999999 8999999999999886 77766655 6778899
Q ss_pred HHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCCChhHHH
Q 008623 199 LIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGGSPLTRI 252 (559)
Q Consensus 199 ~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (559)
.+...+.=.+..+.||||-.....+...+.+...+......|..-.++++.+.+
T Consensus 214 v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAl 267 (528)
T KOG0253|consen 214 VFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKAL 267 (528)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHH
Confidence 988877766778889999877666544444443333333333333344554433
No 111
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.49 E-value=6.8e-13 Score=140.50 Aligned_cols=178 Identities=13% Similarity=0.044 Sum_probs=132.1
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
+++|..+..+...+.....++.+..++|.|+++++|+++.+.+.+.+...+...++.+++|+++||+ |||+.+..+.+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~ 291 (393)
T PRK15011 213 RNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVA 291 (393)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHH
Confidence 3444444444444444455566667899999999999999999988887788888999999999998 999988776655
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..+........ ++.+.+.+.+++.+++.+...+....+..|.+|++ |+++
T Consensus 292 ~~~~~~~~~~~-----------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~-------~g~~ 341 (393)
T PRK15011 292 GVCFYAGMLMA-----------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQ-------AGSA 341 (393)
T ss_pred HHHHHHHHHHH-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-------cchH
Confidence 44443332222 23445556676666666655555667778888754 7899
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 187 FNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
.++++...++|..++|.++|.+.+..||+..|.+.++..+++++..+..
T Consensus 342 ~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 342 TTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999888999999999999999998899999988877777776665543
No 112
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.48 E-value=2.5e-13 Score=148.09 Aligned_cols=181 Identities=13% Similarity=0.135 Sum_probs=129.6
Q ss_pred CccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
+++.+...+...++....+|++..++|.|+++.+|++..+.+.+.....++..++.+++|+++||+ |||++++.+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~ 326 (490)
T PRK10642 248 HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVAL 326 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 344333344445567788999999999999989999988888888888888999999999999999 9999988887654
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+.+.... . ..+...+++++++.+++.+...+....++.|.+|++. |+++.
T Consensus 327 ~~~~~~~~~~~--~------------------~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~ 380 (490)
T PRK10642 327 FVLAIPAFILI--N------------------SNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSAL 380 (490)
T ss_pred HHHHHHHHHHH--h------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHH
Confidence 43333222110 0 0234556677777777766666677788889999997 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
++.+....+++.++|.+.+++.+..+ |+.++++..+..+++++..++.
T Consensus 381 g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 429 (490)
T PRK10642 381 AAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh
Confidence 98555566777889999998877554 6666655555555554444443
No 113
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.48 E-value=1.8e-13 Score=140.27 Aligned_cols=180 Identities=16% Similarity=0.179 Sum_probs=147.4
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhcc-chhHHHHHH-HHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYL-GRYWTIAIF-SII 106 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~-Grr~~~~~~-~~~ 106 (559)
.|.+|.+++..++.-..-|++..|.|.|++|+.|+|..++++..+.+..++..+.+++||++||++ |||..+.+. +++
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 367899999999999999999999999999999999999999999999999999999999999998 777655443 444
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..++.+...++ | +.+..+..+..+++|+...+..-.+.....|..|++. .|++
T Consensus 331 i~~~~~~~w~~---~------------------~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA 383 (448)
T COG2271 331 ITASLVLYWLA---P------------------NGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTA 383 (448)
T ss_pred HHHHHHHHHcC---C------------------CccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccch
Confidence 44554555443 2 2467778888888888888766666777789999886 8999
Q ss_pred hhhhhHHHhH-HHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 187 FNWFYFSINI-GALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 187 ~~~~~~~~~i-G~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
.|....+..+ |+..+....|++.|.+||...|.+..+..+++.+++...
T Consensus 384 ~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~ 433 (448)
T COG2271 384 TGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPV 433 (448)
T ss_pred hchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHH
Confidence 9999888888 999999999999999999999887776666665554433
No 114
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.47 E-value=2.2e-11 Score=131.45 Aligned_cols=66 Identities=18% Similarity=0.041 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhc
Q 008623 457 SIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 457 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
+.+.+.+.-++.|+..+...+..-++..+..|++.++...|++.+++..++.+||++.|.+.+.++
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg 444 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG 444 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 334455555789999999999999999999999999999999999999999999999999998765
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.46 E-value=9e-12 Score=131.67 Aligned_cols=360 Identities=13% Similarity=0.115 Sum_probs=222.3
Q ss_pred HhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc---cchhHHHH-HHHHHHHHH
Q 008623 35 ILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY---LGRYWTIA-IFSIIYVIG 110 (559)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~-~~~~~~~~~ 110 (559)
--...+..+..+-.+..++..|..+..|+++..+|.+..+.-+.-++.-|+.|.+.||. +||+|-.+ .+.+.+++.
T Consensus 17 Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 17 YGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHH
Confidence 33455666667777788999999999999999999999999999999999999999983 37766554 455667777
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+++..+ |.. +.+......++.-.+.+++.........++.+++.++.+ +|.+..++-
T Consensus 97 ~~l~F~~---p~~--------------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~-----ER~~l~s~R 154 (467)
T COG2211 97 AVLLFIT---PDF--------------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQ-----ERASLTSWR 154 (467)
T ss_pred HHHHHcC---CCc--------------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHH-----HHHHHHHHH
Confidence 7777655 210 112334445555677889999999999999999998765 499999999
Q ss_pred hHHHhHHHHHHhhhhhhhccc-------cCchhhhHHHHHHHHHHHHHHHhccccccc-cCCCCChhHHHHHHHHHHHhh
Q 008623 191 YFSINIGALIASSVLVWIQDN-------EGWGWGFGIPAVAMAIAVVSFFSGTRLFRN-QKPGGSPLTRICQVVAASIRK 262 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~-------~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (559)
....++|.++...+.+.+... .||+..-.+.++...+..+..++..|+... ..+.++..+
T Consensus 155 ~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~~~~------------ 222 (467)
T COG2211 155 MVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKTGVK------------ 222 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCccccc------------
Confidence 999999987776665555432 245554444444333343333333332211 000000000
Q ss_pred ccccCCCccchhhhcccccccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhH---HHHHHHHHHHHHH
Q 008623 263 HKVELPADKSLLYETADAESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQV---EELKAIVRLLPIW 339 (559)
Q Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~ 339 (559)
.++ ++.. .+.|-+...+.
T Consensus 223 -----------------------------------------------------~~~----~~~~~~~~~Nrp~~~~l~-- 243 (467)
T COG2211 223 -----------------------------------------------------LKL----KDSFLLIFKNRPLLLLLL-- 243 (467)
T ss_pred -----------------------------------------------------ccH----HHHHHHHHccchHHHHHH--
Confidence 000 0000 11122222222
Q ss_pred HHHHHHHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHH
Q 008623 340 ATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMG 419 (559)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~ 419 (559)
...+.+..++...+.+.+...+ .+| .-+..+...........++..++.. ++.+|++ +++...
T Consensus 244 -~~l~~~~~~~i~~s~~~yy~~y---~lg--~~~l~~~~~~~~~~~~~l~~~~~~p----~L~~~~g-------kk~~~~ 306 (467)
T COG2211 244 -MNLLLFIAFNIRGSIMVYYVTY---VLG--DPELFAYLLLLASGAGLLIGLILWP----RLVKKFG-------KKKLFL 306 (467)
T ss_pred -HHHHHHHHHHHHhhhhheeEEE---EcC--ChHHHHHHHHHHHHHHHHHHHHhHH----HHHHHhc-------hHHHHH
Confidence 2233333333333333332221 112 0011111111111122222233332 3455544 345777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCC-------hhhH
Q 008623 420 IGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAP-------DAMR 492 (559)
Q Consensus 420 ~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P-------~~~r 492 (559)
.|.++.+++.+++.+... .+....++..++.+++.+...+..++++.|..+ .+..
T Consensus 307 ~~~~~~~i~~~~~~f~~~------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~e 368 (467)
T COG2211 307 IGLLLLAVGYLLLYFTPA------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRRE 368 (467)
T ss_pred HHHHHHHHHHHHHHhhcC------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCch
Confidence 888888888888776531 245556666688899999999999999988776 3557
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhhhhc
Q 008623 493 SLCSALSLTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 493 g~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
|...|.+..++-+|.+++..+.|++....+
T Consensus 369 Gi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 369 GIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 889999999999999999999999987655
No 116
>PTZ00207 hypothetical protein; Provisional
Probab=99.45 E-value=6.4e-11 Score=130.04 Aligned_cols=153 Identities=12% Similarity=0.068 Sum_probs=117.6
Q ss_pred HhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 008623 47 YGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPV 126 (559)
Q Consensus 47 ~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (559)
|++. .....+++++|++..+.+++.+... ...++.++.|+++||+ |||++++++.++..+++++++++.. .
T Consensus 44 y~fs-v~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll~~iG~ll~ala~~--~---- 114 (591)
T PTZ00207 44 YAFN-LISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTVFCLGTLLFALTFQ--E---- 114 (591)
T ss_pred HHHH-HHHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHhc--c----
Confidence 4444 4445678999999999998887644 3445677889999998 9999999999999999998887611 0
Q ss_pred CCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHH-Hhhhh
Q 008623 127 CHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALI-ASSVL 205 (559)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~i-gp~i~ 205 (559)
.-..+.+.+.+.|++.|+|.+...+....++.++||++ |+++.++...+.++|+.+ +++..
T Consensus 115 -----------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~-------RG~a~Gi~~~~~gLGsaI~~~l~~ 176 (591)
T PTZ00207 115 -----------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSN-------RGAVVAIMKTFTGLGSAILGSIQL 176 (591)
T ss_pred -----------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhh-------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00135788899999999999988888888899999843 899999999999999975 55555
Q ss_pred hhhccccCchhhhHHHHHHHHHH
Q 008623 206 VWIQDNEGWGWGFGIPAVAMAIA 228 (559)
Q Consensus 206 ~~l~~~~g~~~~f~i~~~~~~i~ 228 (559)
+++. .+|+..|++.++..++.
T Consensus 177 ~l~~--~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 177 AFFS--DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHH--HhHHHHHHHHHHHHHHH
Confidence 5554 35777777666544443
No 117
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=1.1e-12 Score=142.34 Aligned_cols=177 Identities=12% Similarity=0.038 Sum_probs=133.9
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+.+|.+.+..++....++++..++|.|+++++|++..+++.......++..++.+++|+++||+ |||+.+.....+..+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4578888888888888889999999999999999999999999999999999999999999999 998877665444333
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.....+.. ..+.....+.+++.|++.............|.+|++. |+++.++
T Consensus 337 ~~~~~~~~~---------------------~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi 389 (467)
T PRK09556 337 IFTLGVYQH---------------------ATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGI 389 (467)
T ss_pred HHHHHHHHh---------------------cCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHH
Confidence 322222210 0234445566666665443322223356679999887 9999999
Q ss_pred hhHHHhH-HHHHHhhhhhhhcc------------ccCchhhhHHHHHHHHHHHHHHHh
Q 008623 190 FYFSINI-GALIASSVLVWIQD------------NEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 190 ~~~~~~i-G~~igp~i~~~l~~------------~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
.+...++ |+.++|.+.|++.+ ..||+..|.+.+++.+++.+..+.
T Consensus 390 ~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~ 447 (467)
T PRK09556 390 KGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAI 447 (467)
T ss_pred HHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHH
Confidence 9999997 77999999999999 578999998887777666555443
No 118
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=1.2e-12 Score=136.90 Aligned_cols=166 Identities=18% Similarity=0.139 Sum_probs=129.5
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.++......++....++.+..++|.|+++++|.+..+.+.+.....+...++.++.|+++||+ |||+.++.+..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 466667777778888888889999999999999999999999999999999999999999998 9999887655443332
Q ss_pred H-HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 111 M-TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 111 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
. ....... . ..+.+.+.+..++.+++.+...+...+++.|.+|+++ |+++.++
T Consensus 299 ~~~~~~~~~--~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~ 352 (394)
T TIGR00883 299 AVPLLMALL--D------------------SGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASL 352 (394)
T ss_pred HHHHHHHHh--c------------------CCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeee
Confidence 2 2221110 0 1234555666777888888888889999999999987 8999998
Q ss_pred -hhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHH
Q 008623 190 -FYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAV 223 (559)
Q Consensus 190 -~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~ 223 (559)
++.+..+|..++|.++|++.+..| |+..++..+.
T Consensus 353 ~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 353 AYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred hhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 455667899999999999999888 8776665544
No 119
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.41 E-value=2.1e-12 Score=134.20 Aligned_cols=170 Identities=15% Similarity=0.090 Sum_probs=134.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|..+.+....++..........+.+.|. +++|.+..+.+.+.....+...++.++.|+++||+ |||+.+..+.++..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 3455555555555555555556677775 56889998999999999999999999999999998 999999998888777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+..... +. .+...++...++.+++.+...+..+++..|.+|+++ |++..++
T Consensus 283 ~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~ 335 (377)
T TIGR00890 283 GMAAMLFI---PM------------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGF 335 (377)
T ss_pred HHHHHHHc---cc------------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHH
Confidence 77666543 11 122334455667788888877888889999999887 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIA 228 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~ 228 (559)
++...++|..++|.+.|++.+..||++.|.+.+++.+++
T Consensus 336 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 336 LYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 999999999999999999999999999998877655544
No 120
>PRK09952 shikimate transporter; Provisional
Probab=99.41 E-value=2.5e-12 Score=138.24 Aligned_cols=183 Identities=14% Similarity=0.054 Sum_probs=131.0
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
++++.........++....+|....++|.|+++.+|++......+.....+...++.++.|+++||+ ||||+++.+.++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~ 325 (438)
T PRK09952 247 RHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALI 325 (438)
T ss_pred HchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHH
Confidence 3444333334456677788898999999999999999987766666666777788899999999998 999998888766
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..++.+.+..... . ......+.+..++.+++.+...+..+++++|.+|.+. |+++
T Consensus 326 ~~~~~~~~~~~~~--~-----------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg 380 (438)
T PRK09952 326 GTLSAFPFFMALE--A-----------------QSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSG 380 (438)
T ss_pred HHHHHHHHHHHHH--c-----------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHH
Confidence 5544433322210 0 1223334444556677777777788899999999986 8888
Q ss_pred hhhhh-HHHhHHHHHHhhhhhhhcccc--CchhhhHHHHHHHHHHHHHHHhc
Q 008623 187 FNWFY-FSINIGALIASSVLVWIQDNE--GWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 187 ~~~~~-~~~~iG~~igp~i~~~l~~~~--g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
.++.+ .+..+|+.++|.+.+++.+.. +|..++.+.+++.+++.+..+..
T Consensus 381 ~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 381 AGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 88844 445689999999999998744 47877777776666666655543
No 121
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.41 E-value=3.8e-11 Score=129.46 Aligned_cols=150 Identities=14% Similarity=0.170 Sum_probs=124.3
Q ss_pred hhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccc
Q 008623 58 KHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQ 137 (559)
Q Consensus 58 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (559)
++++|+...+.+.+.+++.+++.++.+++|.+.||+ .-.+.+....+...+-.++....
T Consensus 73 ~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~-------------------- 131 (495)
T KOG2533|consen 73 KEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV-------------------- 131 (495)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 467888888999999999999999999999999998 86666666555544444343333
Q ss_pred cCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhh------ccc
Q 008623 138 VTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWI------QDN 211 (559)
Q Consensus 138 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l------~~~ 211 (559)
.+.+.+++.|++.|+..+..+|+...+++.++.+++ |+.-+++++...++|.++|.+++..+ ...
T Consensus 132 ---~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~ 202 (495)
T KOG2533|consen 132 ---HSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGL 202 (495)
T ss_pred ---hhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCc
Confidence 467889999999999999999999999999999998 99999999999999999999998875 345
Q ss_pred cCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 212 EGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 212 ~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
.||||.|++.++++++..+..++..+
T Consensus 203 ~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 203 AGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred CCceeehhHHHHHHHHHHheEEEEec
Confidence 68999999999877666555544443
No 122
>PRK03699 putative transporter; Provisional
Probab=99.39 E-value=3.8e-12 Score=134.82 Aligned_cols=170 Identities=14% Similarity=0.123 Sum_probs=133.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+.++.+.+..++.....+++..++|.|+++++|++..+.+.+.+.+.++..++.+++|+++||+ |||+.+.....+..+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 4556666677777778888899999999999999999999999999999999999999999998 999988877766555
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
........ .+.....+..++.|++.+...+...+...|..|++ +++..++
T Consensus 284 ~~~~~~~~-----------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~ 333 (394)
T PRK03699 284 LMYLFVNT-----------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVA-------SPKLVNF 333 (394)
T ss_pred HHHHHHHc-----------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-------CHHHHHH
Confidence 44443322 22334445566778777777777777777777644 4566788
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 230 (559)
.+.+.++|+.++|.+.|++.+..|++.++++.++..+++.+
T Consensus 334 ~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 334 ILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 88888999999999999999999999998877766555544
No 123
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.39 E-value=3.6e-13 Score=130.33 Aligned_cols=157 Identities=14% Similarity=0.153 Sum_probs=123.3
Q ss_pred chhhHhhHHHHHHHHHHhhh--hhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMS--TNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~--~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
++..+.+..+...-+|+..- .-+..+++.+.+...++..++.+.++.-..+.+.++|++.||.+|-|...++-++...
T Consensus 42 r~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~ 121 (459)
T KOG4686|consen 42 RFMALVFMCLLGFGSYFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVF 121 (459)
T ss_pred HHHHHHHHHHhcccceeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHH
Confidence 44555555554444444432 3466777777777888888999999999999999999999999898887777777667
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+..+.-. ..+..|+...+|++.|+|.-........+...+|..+| ....+|
T Consensus 122 ~GqliFa~Gg--------------------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfG 175 (459)
T KOG4686|consen 122 LGQLIFAAGG--------------------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFG 175 (459)
T ss_pred HHHHHHHhch--------------------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhh
Confidence 7776665321 12568899999999999999888899999999999887 899999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccC
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEG 213 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g 213 (559)
++.....+|...-..+.+++.+..+
T Consensus 176 lqlSvAR~GstvNf~lm~~ly~~~~ 200 (459)
T KOG4686|consen 176 LQLSVARLGSTVNFLLMPFLYDTMG 200 (459)
T ss_pred HHHHHHHhhceeeeeecHHHHHHHH
Confidence 9999999999888888888877654
No 124
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.37 E-value=7.2e-12 Score=130.87 Aligned_cols=172 Identities=13% Similarity=0.047 Sum_probs=131.3
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
.+.+....++..........++|.|+++++|.++.+.+.+.+...+...++.+++|++.||+ |||+++..+.+...+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 34344444444444455567789999999999999999888887777888889999999998 99999888776554444
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
...... ++.+.+.+.+.+.|++.+...+....+..|..|++ ++++.++++
T Consensus 280 ~~~~~~-----------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 329 (375)
T TIGR00899 280 TGLAAD-----------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-------AGAATTLYT 329 (375)
T ss_pred HHHHHH-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-------hhHHHHHHH
Confidence 333322 23555666677788888877777778888888764 568999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
...++|..++|.+.|++.+..||+..|.+.+++.+++.+...+
T Consensus 330 ~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 372 (375)
T TIGR00899 330 NTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLLL 372 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhe
Confidence 9999999999999999999899999999888777766665443
No 125
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.36 E-value=1.2e-11 Score=127.03 Aligned_cols=172 Identities=20% Similarity=0.264 Sum_probs=149.0
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhH-HHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYW-TIAIFSIIYVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~ 109 (559)
.++...+..++..........+++.|..+.+|.+..+.+.+.....+...++.++.|++.||+ |||+ .+..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 344555566677777777888899999888899999999999999999999999999999998 9999 99989888888
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+..... .+.+...+..++.+++.+...+...+++.|..|+++ |++.+++
T Consensus 255 ~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 305 (352)
T cd06174 255 GLLLLALA-----------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGL 305 (352)
T ss_pred HHHHHHHh-----------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHH
Confidence 87777654 336667788899999999999999999999999876 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
.+...++|..++|.+.+.+.+..+|+..+.+.++..+++.+..
T Consensus 306 ~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 306 FNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999998999999998887776666544
No 126
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.36 E-value=7.1e-12 Score=132.66 Aligned_cols=167 Identities=10% Similarity=0.100 Sum_probs=130.8
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhh
Q 008623 39 ECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTA 118 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~ 118 (559)
..+...+++....+++.|+.+ .|. .+.+...+.+.++..++.++.|++.||+ ||||.+..+.++..++.+.....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~- 299 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGW--DGAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-ccc--ccchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh-
Confidence 344455666677788888864 455 3456666778888889999999999998 99999988887777776665543
Q ss_pred ccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHH
Q 008623 119 SVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGA 198 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~ 198 (559)
.+.+.+.+.+++.|++.+...+.......|..|+++ |+++.++++...++|.
T Consensus 300 ----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 300 ----------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSL 351 (399)
T ss_pred ----------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHH
Confidence 234556677888999988888877777888888776 9999999999999999
Q ss_pred HHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcccc
Q 008623 199 LIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRL 238 (559)
Q Consensus 199 ~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 238 (559)
.++|.+.|++.+..||++.|.+.+++.+++++..+...++
T Consensus 352 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 352 GITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999998887777776665554443
No 127
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.36 E-value=5e-12 Score=135.14 Aligned_cols=179 Identities=11% Similarity=0.013 Sum_probs=135.0
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCC--------hhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQS--------SSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s--------~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 103 (559)
++..++..++..........+++.|+++ .|.+ .+..+...+...+...++.++.|+++||+ |||+++..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~~ 287 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLLS 287 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHH
Confidence 4555555555555555555777888754 4543 35668888889999999999999999999 999999999
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcc
Q 008623 104 SIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHK 183 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 183 (559)
.++..++........ + ...+.+.+++.+++.|++.+...+....++.|.+|+++ |
T Consensus 288 ~~~~~v~~~l~~~~~--~-----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~ 342 (418)
T TIGR00889 288 LVAWALRFGFFAYGD--P-----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------R 342 (418)
T ss_pred HHHHHHHHHHHHHcC--c-----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------H
Confidence 988777765554421 0 00124556677888999988888888899999999887 9
Q ss_pred ccchhhhh-HHHhHHHHHHhhhhhhhccc------cCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 184 SSFFNWFY-FSINIGALIASSVLVWIQDN------EGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 184 ~~~~~~~~-~~~~iG~~igp~i~~~l~~~------~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
++++++.+ ....+|..+||.++|++.+. +||+.+|.+.++..+++.++.++..+
T Consensus 343 g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 343 ASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999987 56789999999999999887 46999998887766666555544444
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.35 E-value=9.1e-12 Score=132.06 Aligned_cols=171 Identities=9% Similarity=-0.020 Sum_probs=129.7
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMT 112 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 112 (559)
+.+....++.....+.+..++|.|+++ .|++..+.+.+.....++..++.++.|+++||+ |||+.+..+.+...++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 344444555556677778889999875 799999999999999999999999999999998 999998876665555544
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
.+... .+.+.+.+..++.|++.++..+...++..|.+|+++ |+++.++.+.
T Consensus 301 ~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~ 351 (406)
T PRK11551 301 ALAAA-----------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVA 351 (406)
T ss_pred HHHhc-----------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHH
Confidence 44332 223445555666777777777888889999999987 9999999999
Q ss_pred HHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHh
Q 008623 193 SINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 193 ~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~ 234 (559)
..++|..++|.+.|++.+..+ |...+.+.....+++++..+.
T Consensus 352 ~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 352 VGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred hhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988654 555555555555555444443
No 129
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.35 E-value=2.4e-11 Score=128.72 Aligned_cols=178 Identities=11% Similarity=-0.001 Sum_probs=136.6
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
..|.+.+..++....++++..++|.|+++ +|.+..+++...+.+.++..++.++.|++.||+ |||+.++.+..+..++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVG 283 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHH
Confidence 35666666777788888999999999976 799999999999999999999999999999998 9999998887776666
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
...+... + .+...+. ..+.|++.+...|.......+..++++ .+++.+++.
T Consensus 284 ~~~~~~~---~-------------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~-----~~g~~~g~~ 334 (393)
T PRK09705 284 FCGFIWL---P-------------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPA-----IAGKLVAFM 334 (393)
T ss_pred HHHHHHc---c-------------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHH-----HHHHHHHHH
Confidence 5544322 1 1111121 235677777777877777778876432 389999999
Q ss_pred hHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhccccc
Q 008623 191 YFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSGTRLF 239 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~~~~ 239 (559)
+...++++.++|.+.|++.|..| |...|.+.+++.++..+..+...++.
T Consensus 335 ~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 335 QGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999999876 78888877766666655555555443
No 130
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.34 E-value=9.2e-12 Score=131.84 Aligned_cols=168 Identities=13% Similarity=0.077 Sum_probs=129.4
Q ss_pred HHHHHHHHHhhhhhHHHHHhhhcCCChh---hhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHh
Q 008623 39 ECCERLAYYGMSTNLVRYFKHQLDQSSS---TASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLT 115 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~ 115 (559)
.++.......+.++++.|+.+..+.... ..+.+.....+...++.++.|+++||+ |||+.+..+.+...++.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~ 306 (408)
T PRK09874 228 TLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLIPMS 306 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHHHHH
Confidence 3444445555667788888765443221 245556667778888899999999998 999999988877666665554
Q ss_pred hhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHh
Q 008623 116 VTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSIN 195 (559)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 195 (559)
.. .+.+.+.+.+++.|++.+...+...+++.+..|++. |++.+++++...+
T Consensus 307 ~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~ 357 (408)
T PRK09874 307 FV-----------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRD 357 (408)
T ss_pred Hh-----------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHH
Confidence 33 235667778888999999988888888888888776 8999999999999
Q ss_pred HHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 196 IGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 196 iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
+|..+||.++|++.+..||+..|++.+++.+++.+..+...
T Consensus 358 ~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 358 IGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988877777666554433
No 131
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.34 E-value=8.8e-12 Score=133.11 Aligned_cols=172 Identities=12% Similarity=0.051 Sum_probs=131.7
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhc---CCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQL---DQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
++.+....++....+.....++|.|+.+.+ +.+..+.+.+.+...+...++.+++|+++||+ |||+.+..+.++..
T Consensus 225 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~~ 303 (420)
T PRK09528 225 FWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIMA 303 (420)
T ss_pred eEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHHH
Confidence 444444444444444455556777776543 56667788999999999999999999999999 99999999888888
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.++..+. .+++.+.+.+.+.+++.+...+....++.|.+|++. |++..+
T Consensus 304 ~~~~l~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~ 354 (420)
T PRK09528 304 VRIIGSGFA-----------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYL 354 (420)
T ss_pred HHHHHHHhc-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeee
Confidence 777776654 346667777888888877776777788889998876 777776
Q ss_pred h-hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHH
Q 008623 189 W-FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 189 ~-~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
. ++...++|..++|.+.|++.|..||+.+|.+.+++.++..+..+
T Consensus 355 ~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 355 VGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 6 67788999999999999999999999999987766555544443
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.33 E-value=1.7e-11 Score=129.26 Aligned_cols=169 Identities=14% Similarity=-0.042 Sum_probs=142.8
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+|..+...++...+.+.+..+.|.|+++ +|.+..+.+.+.+...+...+..++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 456777777788888888888999999965 899999999999999999999999999999998 999999999998888
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
........ ++.+.+++.+.+.|++.+...+....++.+. |+++ |+++.++
T Consensus 283 ~~~~~~~~-----------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~ 332 (382)
T TIGR00902 283 RWAIIGAI-----------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQAL 332 (382)
T ss_pred HHHHHHhH-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHH
Confidence 87777655 4577788889999999999999999999987 7765 8888998
Q ss_pred hh-HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 190 FY-FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 190 ~~-~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
++ ....+|..++|.++|++.|..|+ ..|.+.+...++++++
T Consensus 333 ~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 333 YNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 76 46789999999999999999986 5566666655555443
No 133
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.32 E-value=2.3e-11 Score=126.79 Aligned_cols=179 Identities=13% Similarity=-0.010 Sum_probs=129.6
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHH-HHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTI-AIFSIIYV 108 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~-~~~~~~~~ 108 (559)
|.++..++..++.....+.+..++|.|+++.+|.+..+.+.+.....+...++.+++|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4567777888888888888999999999999999999999999999999999999999999998 988611 11111111
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+.......... ...+.+.......+.+.+.+ ..+...++..|.+|+++ |+++.+
T Consensus 294 ~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~ 350 (399)
T TIGR00893 294 IAGLVLSLLMFATN----------------YVNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGG 350 (399)
T ss_pred HHHHHHHHHHHHhc----------------cchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHH
Confidence 11111111000000 00123333333333333433 67888999999999987 999999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHH
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~ 232 (559)
+.+...++|..++|.+.|++.+..| |+..|.+.++..+++.+..
T Consensus 351 ~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 351 LINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 9999888777666655544
No 134
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=1.9e-11 Score=131.23 Aligned_cols=181 Identities=12% Similarity=0.029 Sum_probs=124.4
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccch--hHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGR--YWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--r~~~~~~~~~~ 107 (559)
+.+|.+.+..++....++++..++|.|+++++|++..+++...+.+.++..++.+++|+++||+.++ ++......+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 3466666667777777778888999999888999999999999999999999999999999997222 22222222222
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.+..+.+... +. .+.....+..+++|++.............|.+|+++ |+++.
T Consensus 323 ~~~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 375 (434)
T PRK11663 323 LLSVGSLWLM---PF------------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAAT 375 (434)
T ss_pred HHHHHHHHHc---cc------------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHH
Confidence 2222222111 11 122222233333443322222223456678888776 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
++.+...++|+.++|.+.|++.+..||+..|++.+++.+++.+..+...|
T Consensus 376 g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 376 GFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998888777666655544443
No 135
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.30 E-value=2.6e-11 Score=128.76 Aligned_cols=177 Identities=13% Similarity=-0.010 Sum_probs=130.6
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHH-HHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIA-IFSIIYV 108 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~ 108 (559)
|.++...+..++....+++...++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 34677777788888889999999999985 5899999999999999999999999999999998 9888764 3333333
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+.+..... ....+.+...+..++.|++.+...+. .....|..|+ + |+++++
T Consensus 300 ~~~~~l~~~~~------------------~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~-~------~g~~~g 353 (402)
T TIGR00897 300 IFTLALYYIPQ------------------HFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLAPK-H------KGAAMS 353 (402)
T ss_pred HHHHHHHHHHH------------------ccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcc-h------hHHHHH
Confidence 33333322210 00123445556667777777765443 4455665543 4 899999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHh
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+.+...++|+.++|.+.+.+.+..||...|++.+++.+++.+...+
T Consensus 354 ~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 354 VLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998888776666555443
No 136
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.29 E-value=2.2e-11 Score=137.54 Aligned_cols=134 Identities=11% Similarity=0.059 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHH
Q 008623 71 NVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVAL 150 (559)
Q Consensus 71 ~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (559)
......++..++.+++|+++||+ |||++++.+.++.+++.+++++. .+...+++.+
T Consensus 600 ~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~-----------------------~s~~~ll~~~ 655 (742)
T TIGR01299 600 VNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG-----------------------NSESAMIALL 655 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH-----------------------ccHHHHHHHH
Confidence 34556678889999999999998 99999999988888887777655 2234455666
Q ss_pred HHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHH
Q 008623 151 YLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 151 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 230 (559)
++.+++.++..+...++++|++|.+. |++++++.+....+|+++||.+++.+.+. +...+|++.+++.+++.+
T Consensus 656 ~l~g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~l 728 (742)
T TIGR01299 656 CLFGGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGL 728 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHH
Confidence 77777777778888999999999987 99999999999999999999999988764 456677777766666655
Q ss_pred HHHhc
Q 008623 231 SFFSG 235 (559)
Q Consensus 231 ~~~~~ 235 (559)
+..+.
T Consensus 729 l~~~L 733 (742)
T TIGR01299 729 LALKL 733 (742)
T ss_pred HHHhC
Confidence 54443
No 137
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.28 E-value=1.5e-11 Score=131.15 Aligned_cols=157 Identities=8% Similarity=-0.080 Sum_probs=127.1
Q ss_pred HHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 008623 46 YYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKP 125 (559)
Q Consensus 46 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (559)
..++..++|.|+++.+|.+..+.+++.+...++..++.++.|++.||. ++++.+..+.++..++.+.+.+.
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 456677899999988999999999999999999999999999999997 88888888877766666655433
Q ss_pred CCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 126 VCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
++.+...+..++.|++.+...+...+++.|..|++. |++++++++...++|..+||.+.
T Consensus 310 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~ 368 (417)
T PRK10489 310 ---------------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALL 368 (417)
T ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHH
Confidence 234555666777888887766777788899999886 99999999999999999999999
Q ss_pred hhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 206 VWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 206 ~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
|++.+..|++..+.+.+.+.++..+..
T Consensus 369 G~l~~~~g~~~~~~~~~~~~~~~~~~~ 395 (417)
T PRK10489 369 GGLGAMMTPVASASASGFGLLIIGVLL 395 (417)
T ss_pred HHHHHHhchhhHHHHHHHHHHHHHHHH
Confidence 999999998888876665544433333
No 138
>PRK03545 putative arabinose transporter; Provisional
Probab=99.28 E-value=8.6e-11 Score=124.14 Aligned_cols=174 Identities=12% Similarity=-0.032 Sum_probs=132.7
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
++......++.....++...+++.|++++.|.+..+.+.+.....+...++.++.|+++||+ |||+.. .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 44455555566666666777888899888999999999999999999999999999999998 987654 4444333333
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
....... .+.+.+.+..++.|++.+...+...+.+.+..|+ + |++++++++
T Consensus 285 ~~l~~~~----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~ 335 (390)
T PRK03545 285 LLLLPAA----------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-A------TDVAMALFS 335 (390)
T ss_pred HHHHHHh----------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-c------HHHHHHHHH
Confidence 3322110 2355566677788888877777777778787764 3 789999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
...++|..+||.++|++.+..|++..|.+.+.+.+++++......
T Consensus 336 ~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 336 GIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999999988877777766655544
No 139
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.28 E-value=1.4e-11 Score=132.97 Aligned_cols=176 Identities=14% Similarity=0.105 Sum_probs=122.8
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccch--hHH-HHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGR--YWT-IAIFSII 106 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr--r~~-~~~~~~~ 106 (559)
+.+|...+..++.....++...++|.|++++.|++..+++.+...+.+...++.+++|+++||+ ++ |+. .+....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 4467777777777778888889999999999999999999998889999999999999999997 53 332 2222233
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..++.+...+. +. .+.+...+..++.|.+.....+....+..|.+|++. |+++
T Consensus 332 ~~~~~~~~~~~---~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~ 384 (452)
T PRK11273 332 VTIATIVYWLN---PA------------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTA 384 (452)
T ss_pred HHHHHHHHHHh---cc------------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhH
Confidence 33333322221 10 123333333444444332222223345678999886 9999
Q ss_pred hhhhhHHHhHHHHH-HhhhhhhhccccCchhhhHHHHHHHHHHHHHHH
Q 008623 187 FNWFYFSINIGALI-ASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 187 ~~~~~~~~~iG~~i-gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
+++.+...++|+.+ +|.+.|++.+..||+..|.+.++..+++++...
T Consensus 385 ~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 385 AGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 99999988898765 799999999999999999877776666655443
No 140
>PRK15075 citrate-proton symporter; Provisional
Probab=99.27 E-value=3.2e-11 Score=129.44 Aligned_cols=153 Identities=14% Similarity=0.130 Sum_probs=110.4
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHH-HH
Q 008623 36 LGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMT-FL 114 (559)
Q Consensus 36 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~-~~ 114 (559)
+...++....++.+..++|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||+.++.+.+...+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444556677888889999999988999999999888888899999999999999998 999988876544332221 11
Q ss_pred hhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHH
Q 008623 115 TVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSI 194 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 194 (559)
.... . ..+.....+..++.+++.+...+....+..|.+|++. |+++.++.+...
T Consensus 323 ~~~~--~------------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~ 376 (434)
T PRK15075 323 SWLV--A------------------APSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLA 376 (434)
T ss_pred HHHH--c------------------CCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHH
Confidence 1110 0 0122223333444556666666666778899999987 999999855444
Q ss_pred -hHHHHHHhhhhhhhccccCch
Q 008623 195 -NIGALIASSVLVWIQDNEGWG 215 (559)
Q Consensus 195 -~iG~~igp~i~~~l~~~~g~~ 215 (559)
.+++.++|.+.+++.+..|++
T Consensus 377 ~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 377 TAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHhhhHHHHHHHHHHhcCCc
Confidence 456888999999999988854
No 141
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.27 E-value=7.8e-11 Score=124.15 Aligned_cols=159 Identities=13% Similarity=0.179 Sum_probs=121.8
Q ss_pred HHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhcc
Q 008623 41 CERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASV 120 (559)
Q Consensus 41 ~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 120 (559)
.....+.....++|.|+++ .|.+..+.+.+.+...+...++.++.|++.||+ |||+++..+..+..++.+... .
T Consensus 211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~--- 284 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S--- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h---
Confidence 3334444455678989875 699999999999999999999999999999999 999998888777666554332 1
Q ss_pred CCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHH
Q 008623 121 SGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALI 200 (559)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~i 200 (559)
.......+++.|++.+...|...+.+.|..|+++ ++...+.++...++|..+
T Consensus 285 ----------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~i 336 (381)
T PRK03633 285 ----------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLL 336 (381)
T ss_pred ----------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHH
Confidence 1112334556676666777888888899988765 677777778888999999
Q ss_pred HhhhhhhhccccCchhhhHHHHHHHHHHHHHHH
Q 008623 201 ASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 201 gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
||.++|++.|+.||++.|.+.+.+.++..+..+
T Consensus 337 gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 337 GPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987776665554433
No 142
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.27 E-value=4.6e-11 Score=122.86 Aligned_cols=185 Identities=14% Similarity=0.053 Sum_probs=148.6
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|..|.+.+..+...-++-++..++|.|+++++|.+..+++.+...+.+...+..+.+|+++||+ |.+|+++.....+++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999999999999999999999999999999 999999888887777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+........ +. +....+....+...+..++..|.-+.....++...+|++ -+...++
T Consensus 297 ~~~~l~~~~--~~--------------~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~ 353 (417)
T COG2223 297 AAALLSLFL--TG--------------FGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGI 353 (417)
T ss_pred HHHHHHccc--cc--------------cccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHH
Confidence 777665541 11 001123444444455566667777777888888888875 5888999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhcccc
Q 008623 190 FYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSGTRL 238 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~~~ 238 (559)
.....++|+..-|...+...+..| +...|++.....+++.++.+....+
T Consensus 354 vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 354 VGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999888888 8888888877777777666555443
No 143
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.27 E-value=4.1e-10 Score=115.98 Aligned_cols=128 Identities=13% Similarity=-0.002 Sum_probs=89.2
Q ss_pred hhhHHHHHhhhcCC---Ch----hhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHH-HHHHHHHHHHHHHHhhhhccC
Q 008623 50 STNLVRYFKHQLDQ---SS----STASKNVLDWSGTCYITPLIGAFLADAYLGRYWTI-AIFSIIYVIGMTFLTVTASVS 121 (559)
Q Consensus 50 ~~~l~~yl~~~lg~---s~----~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~-~~~~~~~~~~~~~~~~~~~~~ 121 (559)
..++|.|+++..+- ++ +-.+...++..+...+..|+-|.++|+. |+||-. -...++.++..+.+.++ |
T Consensus 35 t~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i---~ 110 (438)
T COG2270 35 TFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI---P 110 (438)
T ss_pred eehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh---C
Confidence 45788898877654 33 3345666777888899999999999998 865544 44555566666666655 2
Q ss_pred CCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHH
Q 008623 122 GLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIA 201 (559)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ig 201 (559)
+..+.+...+...+..++..+......+++.+..++++ .++..+.-+....+|+.+.
T Consensus 111 -----------------~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~ 167 (438)
T COG2270 111 -----------------PGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVIL 167 (438)
T ss_pred -----------------CCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHH
Confidence 12345556666677788888888899999999999876 5556555555666666655
Q ss_pred hhh
Q 008623 202 SSV 204 (559)
Q Consensus 202 p~i 204 (559)
-++
T Consensus 168 li~ 170 (438)
T COG2270 168 LIF 170 (438)
T ss_pred HHH
Confidence 444
No 144
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.26 E-value=1e-09 Score=113.32 Aligned_cols=343 Identities=12% Similarity=0.119 Sum_probs=203.8
Q ss_pred HHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccc-----hhHHHHH-HHHHHHHHHHHHhhhhccCCCCCCCCC
Q 008623 56 YFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLG-----RYWTIAI-FSIIYVIGMTFLTVTASVSGLKPVCHG 129 (559)
Q Consensus 56 yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-----rr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (559)
-+..+++.+..-.+.+++..++... ..+..|+.+|+. + ||--+++ |.++...+......+...-.
T Consensus 5 VMIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~------- 75 (403)
T PF03209_consen 5 VMIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA------- 75 (403)
T ss_pred hHHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 3556899999888888888877665 599999999998 6 5555444 45555555544443321111
Q ss_pred CCCCcccc--cCcchhH--HHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 130 PRGEETCQ--VTDAQSA--TFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 130 ~~~~~~~~--~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
+..+ ......+ ...+...+.|+|.+....+..++++|..|+++ |++..++.+.+.-+|.+++..+.
T Consensus 76 ----~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 76 ----ESGQQSSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred ----ccccccccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHH
Confidence 0000 0111222 34455566788888888899999999999987 99999999999999999999999
Q ss_pred hhhccccCch----hhhHHHHHHHHHHHHHHHhccccccccC-CCCChhHHHHHHHHHHHhhccccCCCccchhhhcccc
Q 008623 206 VWIQDNEGWG----WGFGIPAVAMAIAVVSFFSGTRLFRNQK-PGGSPLTRICQVVAASIRKHKVELPADKSLLYETADA 280 (559)
Q Consensus 206 ~~l~~~~g~~----~~f~i~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 280 (559)
+.+.+.+... ..-..+.+..++.++..|-..++.++.. ..+++..
T Consensus 146 g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~------------------------------ 195 (403)
T PF03209_consen 146 GRLLDPFSPERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAERPRP------------------------------ 195 (403)
T ss_pred HHHccccCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCCCCCc------------------------------
Confidence 9888876522 1111222333344444443333222111 0000000
Q ss_pred cccccCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhcc
Q 008623 281 ESNITGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSSLFVLQG 360 (559)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (559)
.+.+. |+... ...+.++++.. +++....+++....+..+
T Consensus 196 ----------------~f~~a----------------~~~~~--~~~~a~~f~~f--l~l~t~a~~~QD~iLEPy----- 234 (403)
T PF03209_consen 196 ----------------PFREA----------------WRQVW--ASPQARRFFVF--LFLGTLAFFMQDVILEPY----- 234 (403)
T ss_pred ----------------cHHHH----------------HHHHH--hCCChhHHHHH--HHHHHHHHHhhHHHcCCc-----
Confidence 00000 00000 00112222211 222333333332222221
Q ss_pred ccccCCCCCccceeCccc---cccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHH
Q 008623 361 ERMDTHVGNSSFKIPPAS---LSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLEL 437 (559)
Q Consensus 361 ~~~~~~~g~~~~~~~~~~---~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~ 437 (559)
|.+-|.++++. +++.-..+.++...+.+++.. +| .++.+....|...+++++..+.....
T Consensus 235 -------gg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~---~~-------~~~~~~a~~G~~~~~~~f~lii~a~~ 297 (403)
T PF03209_consen 235 -------GGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLS---RR-------LGKKRTAALGCLLGALAFALIILAGP 297 (403)
T ss_pred -------hhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-------CCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 11112233322 333344555555555555332 22 23334445666666666665544321
Q ss_pred HHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008623 438 IRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIV 517 (559)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v 517 (559)
. .+.+.+....+++|++.++......+.+.+..+++..|..+|.|...+.++..++.+++|.+
T Consensus 298 ~-----------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 298 L-----------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred c-----------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 24567788889999999999999999999999999999999999999999999999999999
Q ss_pred hhhhc
Q 008623 518 TSIST 522 (559)
Q Consensus 518 ~~~~~ 522 (559)
.|...
T Consensus 361 ~D~~~ 365 (403)
T PF03209_consen 361 RDLVR 365 (403)
T ss_pred HHHHH
Confidence 88754
No 145
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.26 E-value=5.7e-11 Score=127.43 Aligned_cols=177 Identities=12% Similarity=0.016 Sum_probs=114.1
Q ss_pred hhhHhhHHH-HHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 32 CPFILGNEC-CERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 32 ~~~~~~~~~-~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.+.+....+ +....+|++..++|.|+++++|++..+.+...+...+...++.++.|+++||+ |||+.++.+.++..+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~ 322 (432)
T PRK10406 244 AFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALF 322 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHH
Confidence 344444333 44778889999999999999999999999888888888889999999999998 9999887766543333
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+...... .. ..+....+....+..++.+...+....+.+|.+|++. |++++|+.
T Consensus 323 ~~~~~~~~--~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~ 377 (432)
T PRK10406 323 TVPILSAL--QN-----------------VSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLS 377 (432)
T ss_pred HHHHHHHH--Hc-----------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHH
Confidence 22221110 00 0112211111122222233333456678899999987 99999997
Q ss_pred hHHHhH-HHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhc
Q 008623 191 YFSINI-GALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 191 ~~~~~i-G~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
+...++ ++..+|.+.+++. ..| |...+++.++..+++++..++.
T Consensus 378 ~~~g~~~~g~~~p~~~~~l~-~~g~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 378 YAVANALFGGSAEYVALSLK-SIGMETAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred HHHHHHHHHhHHHHHHHHHH-HhCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 766554 4555888777664 445 5555665555555555554443
No 146
>PRK12382 putative transporter; Provisional
Probab=99.26 E-value=4.2e-11 Score=126.47 Aligned_cols=163 Identities=10% Similarity=0.146 Sum_probs=129.1
Q ss_pred HHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhc
Q 008623 40 CCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTAS 119 (559)
Q Consensus 40 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 119 (559)
++....+..+..+.+.|+++ .|.+ +.+.....+.++..++.++.|++.||+ ||||.+..+..+..++.+...+.
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~-- 299 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA-- 299 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc--
Confidence 34445566667788888865 4554 345566677778888999999999998 99999998888777776665543
Q ss_pred cCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHH
Q 008623 120 VSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGAL 199 (559)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ 199 (559)
.+.+...+..++.|++.+...+...+.+.|.+|+++ |++++++++...++|..
T Consensus 300 ---------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ 352 (392)
T PRK12382 300 ---------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYG 352 (392)
T ss_pred ---------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHH
Confidence 234556667788888888878888888889998876 99999999999999999
Q ss_pred HHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 200 IASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 200 igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
++|.+.|++.+..||+..|.+.+.+.+++.+..++.
T Consensus 353 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 353 VSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999998887777766655443
No 147
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.25 E-value=1.1e-11 Score=109.59 Aligned_cols=132 Identities=15% Similarity=0.230 Sum_probs=111.2
Q ss_pred HHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHH
Q 008623 73 LDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYL 152 (559)
Q Consensus 73 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 152 (559)
+.+.++..++.++.|+++||+ |||+.++.+..+..++.+..... .+.+.+.+.+++
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 60 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS-----------------------SNITVLIIARFL 60 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh-----------------------ccHHHHHHHHHH
Confidence 345677888999999999998 99999999988877777766554 346667788899
Q ss_pred HHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 153 IALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 153 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
.|++.+...+...+++.|.+|+++ |++..++.+...++|..++|.+.+++.+..+|++.+.+.+...++..+..
T Consensus 61 ~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 61 QGFGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHHHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 999999888999999999999887 99999999999999999999999999988899999888776666555544
Q ss_pred Hh
Q 008623 233 FS 234 (559)
Q Consensus 233 ~~ 234 (559)
..
T Consensus 135 ~~ 136 (141)
T TIGR00880 135 AF 136 (141)
T ss_pred hh
Confidence 44
No 148
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.25 E-value=1e-10 Score=127.43 Aligned_cols=148 Identities=15% Similarity=0.132 Sum_probs=113.8
Q ss_pred hhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCC
Q 008623 48 GMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVC 127 (559)
Q Consensus 48 ~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (559)
....++|.|+++++|++..+.+.+.+...++..++.+++|+++||+ |||+++..+.++..++.+..... +
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~------ 362 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAI---G------ 362 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhc---c------
Confidence 4567899999889999999999999999999999999999999998 99999888776555444333222 1
Q ss_pred CCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhh
Q 008623 128 HGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVW 207 (559)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~ 207 (559)
..+.+...+..++.+....+..+..++++.|.+|+++ |++.+++++...++|+.+||++.|+
T Consensus 363 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~ 424 (496)
T PRK03893 363 ------------GANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGAL 424 (496)
T ss_pred ------------ccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHH
Confidence 1223333333343333333345667778899999876 9999999999999999999999999
Q ss_pred hccccCchhhhHHHHH
Q 008623 208 IQDNEGWGWGFGIPAV 223 (559)
Q Consensus 208 l~~~~g~~~~f~i~~~ 223 (559)
+.+..||+..+...+.
T Consensus 425 l~~~~g~~~~~~~~~~ 440 (496)
T PRK03893 425 IAQRLDLGTALASLSF 440 (496)
T ss_pred HhccCChHHHHHHHHH
Confidence 9999999887755443
No 149
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.24 E-value=5.3e-11 Score=127.97 Aligned_cols=182 Identities=13% Similarity=0.047 Sum_probs=123.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+.+|...+..++.....+++..++|.|+++..|++..+++++...+.+...++.+++|+++||+ |+++....+..+..+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3466776777777777888999999999998999999999999999999999999999999998 754433333322221
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
..+........+. .+.+...+..++.|++..+..........|.+|+++ |+++.++
T Consensus 330 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 385 (438)
T TIGR00712 330 VTIAVIVYWMNPA------------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGF 385 (438)
T ss_pred HHHHHHHHHhcCC------------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhh
Confidence 1111111000010 122323333344444333222222345678889876 9999999
Q ss_pred hhHHHhHHH-HHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 190 FYFSINIGA-LIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 190 ~~~~~~iG~-~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
.+...++|+ .++|.+.|.+.+..||..+|.+.+...+++++..+...
T Consensus 386 ~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 386 TGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred hchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 998888875 68999999999999999998877766656655554443
No 150
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.22 E-value=9e-11 Score=123.60 Aligned_cols=157 Identities=15% Similarity=0.111 Sum_probs=122.1
Q ss_pred HhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHH
Q 008623 35 ILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFL 114 (559)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~ 114 (559)
+.....+.+...+....++|.|+.+++|++..+.+.+.+...++..++.++.|+++||+ |||+.+..+.++..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33344444555566778899999999999999999999999999999999999999998 99999888776543322222
Q ss_pred hhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHH
Q 008623 115 TVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSI 194 (559)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 194 (559)
... . .+.+.+.+..++.+++.+...+..++++.|.+|+++ |++++++.+...
T Consensus 322 ~~~---~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~ 373 (405)
T TIGR00891 322 FAI---G-------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLG 373 (405)
T ss_pred HHh---C-------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHH
Confidence 111 0 233444555566666666777788889999999887 999999999999
Q ss_pred hHHHHHHhhhhhhhccccC-chhhhHH
Q 008623 195 NIGALIASSVLVWIQDNEG-WGWGFGI 220 (559)
Q Consensus 195 ~iG~~igp~i~~~l~~~~g-~~~~f~i 220 (559)
++|+.++|++.|++.+..| |+..+..
T Consensus 374 ~~g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 374 NLGGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999999988 8766554
No 151
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.3e-10 Score=112.78 Aligned_cols=180 Identities=13% Similarity=0.092 Sum_probs=140.1
Q ss_pred ccCCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHH
Q 008623 24 TKTGTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~ 103 (559)
......+.+|++.+..++.....+-+...-|.++++.+|+|+.+++.+.+.......+..|+.|.++||+ ||+-..+.+
T Consensus 258 dv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~ 336 (459)
T KOG4686|consen 258 DVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVAS 336 (459)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHH
Confidence 3334456689999999999998888888899999999999999999999999999999999999999999 998766655
Q ss_pred H-HHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc
Q 008623 104 S-IIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH 182 (559)
Q Consensus 104 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (559)
. +....+...+.++ .+.-+++..++|+.......+.+.+++...|+++
T Consensus 337 a~~~tl~~H~~l~Ft-------------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------ 385 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFT-------------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------ 385 (459)
T ss_pred HHHHHHHHhhhHHhh-------------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------
Confidence 4 4455565555554 2234455667777777776677888899999887
Q ss_pred cccchhhhhHHHhHHHHHHhhhhhhhccccC---chhhhHHHHHHH-HHHHHHHHhc
Q 008623 183 KSSFFNWFYFSINIGALIASSVLVWIQDNEG---WGWGFGIPAVAM-AIAVVSFFSG 235 (559)
Q Consensus 183 r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g---~~~~f~i~~~~~-~i~~~~~~~~ 235 (559)
.+++++..+...|+|-.+.|+++|.+.+.-| |--+|++....+ +..+.+++..
T Consensus 386 LGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~ 442 (459)
T KOG4686|consen 386 LGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYL 442 (459)
T ss_pred hcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhhe
Confidence 9999999999999999999999999988765 444566555444 3333334433
No 152
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.21 E-value=1.1e-10 Score=127.40 Aligned_cols=179 Identities=12% Similarity=0.070 Sum_probs=129.0
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHH-HHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVL-DWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~-~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.|......++.....+....+.+.|+.+++|++..+.+.+.. ...++..++.+++|+++||+ |||+.++++.++.+++
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 444444455666666667778888988889999999999875 55678999999999999999 9999887766554444
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+....... ...+.+.+.+..++..++.|...+...++..+..+++. +++.+++.
T Consensus 303 ~l~~~~l~~-------------------~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~ 357 (491)
T PRK11010 303 NAGYWLLSI-------------------TDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALL 357 (491)
T ss_pred HHHHHHHHh-------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHH
Confidence 333222110 00123333334444444444444566788888888886 78889999
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
+...++|..+++.+.|++.+..||+..|.+.+++.+++++.....+
T Consensus 358 ~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 358 SALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998988999999999999999888887777766665543
No 153
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.21 E-value=2.7e-10 Score=118.20 Aligned_cols=178 Identities=17% Similarity=0.123 Sum_probs=145.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+.++..+...++...+.|+..+|+..|+++..|++.+..+++...+.++..++..++|+++|| +.|+++.....+.++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 346888889999999999999999999999999999999999999999999999999999999 788888888777777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
..+.+.+.. .+.+...+..++.|+...........-.++..|++ +..+.++
T Consensus 289 ~~l~l~~~~----------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~-------~~~a~sl 339 (394)
T COG2814 289 ALLALTFTG----------------------ASPALALALLFLWGFAFSPALQGLQTRLARLAPDA-------ADLAGSL 339 (394)
T ss_pred HHHHHHHhc----------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCc-------hHHHHHH
Confidence 776665541 33455555556667666655555555555544444 7889999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcccc
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRL 238 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~ 238 (559)
+..+.|+|..+|..++|.+.++.|+....+..++..++++++.+...++
T Consensus 340 ~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 340 NVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998888887776655443
No 154
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.19 E-value=2.3e-11 Score=128.88 Aligned_cols=193 Identities=15% Similarity=0.123 Sum_probs=141.5
Q ss_pred CCCcccCCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhh-hcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccch-h
Q 008623 20 PADKTKTGTWKACPFILGNECCERLAYYGMSTNLVRYFKH-QLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGR-Y 97 (559)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r 97 (559)
...+..+.+||.+++.....+.....++.+.+..-.|+++ +.+-+.+..|++++...++..++.|+.|+...|. |+ |
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k 102 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVK 102 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcc
Confidence 3344456789999999999999999988888888888874 3566777899999999999999999999999998 75 7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcch
Q 008623 98 WTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADE 177 (559)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 177 (559)
+-++.+.++.++|.++-......|+ +..+.++++|++.|+|.+.. ...=+|+++....++
T Consensus 103 ~Pli~s~ii~~~g~llY~~l~~~~~------------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d- 162 (488)
T KOG2325|consen 103 KPLIVSFLIAIIGNLLYLALAYVPN------------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED- 162 (488)
T ss_pred cCHHHHHHHHHHHHHHHHHHHhccc------------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc-
Confidence 7777888888888877743323332 36788999999999998865 455677777776666
Q ss_pred HhhhccccchhhhhHHHhHHHHHHhhhhhhhc----ccc---------CchhhhHHHHHHHHHHHHHHHhcccc
Q 008623 178 AEKKHKSSFFNWFYFSINIGALIASSVLVWIQ----DNE---------GWGWGFGIPAVAMAIAVVSFFSGTRL 238 (559)
Q Consensus 178 ~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~----~~~---------g~~~~f~i~~~~~~i~~~~~~~~~~~ 238 (559)
|.++++....+..+|..+||.+...+. +.+ -|..+-++.+++.++..+.+.+..++
T Consensus 163 -----R~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 163 -----RPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred -----hHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 888888877766777777776554332 110 13445566666666666655555443
No 155
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.19 E-value=6.9e-11 Score=122.92 Aligned_cols=162 Identities=13% Similarity=0.149 Sum_probs=119.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH--HH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI--IY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~--~~ 107 (559)
|.++.+.+..++.....+.+..++|.|+++.+|++..+.+.+.....+...++.++.|+++||..+||+..+.... ..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 4567777777777778888889999999999999999999999999999999999999999986234433322211 11
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++....... + ..+.....+..++.|+......+....+..|.+|+++ |+++.
T Consensus 296 ~~~~~~~~~~---~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~ 348 (379)
T TIGR00881 296 IVSLLVYWLN---P------------------AANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAA 348 (379)
T ss_pred HHHHHHHhcC---c------------------chhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHH
Confidence 1111111111 1 1233344455555666555555566678899999887 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhh
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGF 218 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f 218 (559)
++++...++|+.++|.+.|.+.+..||++.|
T Consensus 349 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 349 GFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 9999999999999999999999999998764
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.18 E-value=3.9e-10 Score=120.95 Aligned_cols=169 Identities=12% Similarity=0.023 Sum_probs=120.0
Q ss_pred HHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 008623 46 YYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKP 125 (559)
Q Consensus 46 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (559)
...+..+.|.+ .++.|++..+.+.......+...++.+++|+++||+ |||+.+..+.++.+++.+.+.+......
T Consensus 300 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 374 (481)
T TIGR00879 300 INAIMYYSPTI-FENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFV--- 374 (481)
T ss_pred CeehHHHHHHH-HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhccc---
Confidence 33344445544 457899998888888999999999999999999998 9999999988877777666653211000
Q ss_pred CCCCCCCCcccccC---cchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHh
Q 008623 126 VCHGPRGEETCQVT---DAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIAS 202 (559)
Q Consensus 126 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp 202 (559)
.. ..+...+....++.+.......+....+..|.+|+++ |+++.++.+...++|++++|
T Consensus 375 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~ 436 (481)
T TIGR00879 375 ------------TGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVG 436 (481)
T ss_pred ------------CCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHH
Confidence 00 0022222222222222223344667777899999886 99999999999999999999
Q ss_pred hhhhhhccccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 203 SVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 203 ~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
.+.+++.+..+|++.|++.+++.+++.+..++..+
T Consensus 437 ~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 437 FLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred HHHHHHHHhcCccceehhHHHHHHHHHHHHheecc
Confidence 99999998889999998877766666655544433
No 157
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.17 E-value=2.3e-10 Score=123.66 Aligned_cols=171 Identities=11% Similarity=0.011 Sum_probs=134.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc-cchhHHHHHHHHH--
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY-LGRYWTIAIFSII-- 106 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~-~Grr~~~~~~~~~-- 106 (559)
|.++..+...++...+++....+++.|+++ +|++..+++.+.+...++..++.+++|+++||. .++|+...++...
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 446666677777778888888899999864 799999999999999999999999999999983 1444444433322
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
..++.+++... .+.+.+++.+++.|++.+...+...+++.|.+|+++ +++.
T Consensus 320 ~~l~~ll~~~~-----------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~ 370 (455)
T TIGR00892 320 NGLTHLLCALA-----------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSA 370 (455)
T ss_pred HHHHHHHHHHh-----------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhH
Confidence 22333333222 345667778889999999988999999999999876 8999
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhcccc-CchhhhHHHHHHHHHHHH
Q 008623 187 FNWFYFSINIGALIASSVLVWIQDNE-GWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~~~~-g~~~~f~i~~~~~~i~~~ 230 (559)
+++++...++|..+||.++|++.+.. +|++.|++.++..+++.+
T Consensus 371 ~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 371 VGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999877 499999988876665554
No 158
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.17 E-value=6.5e-10 Score=120.89 Aligned_cols=173 Identities=12% Similarity=0.019 Sum_probs=115.1
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhH-----HHH--HHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYW-----TIA--IFS 104 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-----~~~--~~~ 104 (559)
+|.+.+..++.....+.+..++|.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ..+ +..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 46555555555555666778899999989999999999999999999999999999999998 8762 222 222
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccc
Q 008623 105 IIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKS 184 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 184 (559)
++..+..+.+... .+.+...+..++.+++.+...+...++..+..|+ + ++
T Consensus 333 ~l~~i~~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g 382 (476)
T PLN00028 333 TLGGVFCIWLGRA-----------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSRR-S------LG 382 (476)
T ss_pred HHHHHHHHHhccc-----------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccChh-h------ch
Confidence 2211211221111 2233333444455555444445555666666553 3 89
Q ss_pred cchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 185 SFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 185 ~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
...++.+.+.++|+.++|.+.+ ..+..+|+..|++.+++.+++.+..++.+
T Consensus 383 ~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 383 VISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 9999988888888888886654 33345699999988877777766655544
No 159
>PRK10504 putative transporter; Provisional
Probab=99.16 E-value=3.7e-10 Score=122.36 Aligned_cols=158 Identities=9% Similarity=0.000 Sum_probs=124.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+...+...++...++.....+.|.|++..+|.++.+.+++.....+...++.++.|++.||+ |||+++..+.++..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 339 (471)
T PRK10504 261 RTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLAL 339 (471)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 3455666667777777666667788899888999999999998888888888889999999999 999999988887776
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+...+.... ...+.+.+.+..++.|++.+...+....+..+.+|+++ ++.++++
T Consensus 340 ~~~~~~~~~--------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 393 (471)
T PRK10504 340 VSLLFMLVA--------------------LLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSL 393 (471)
T ss_pred HHHHHHhcc--------------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHH
Confidence 655554331 01223334445566778888777888888889999876 8999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCc
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGW 214 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~ 214 (559)
.++..++|..+|+.++|.+.+..|+
T Consensus 394 ~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 394 LSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988776655
No 160
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.15 E-value=4.2e-10 Score=115.37 Aligned_cols=161 Identities=13% Similarity=0.032 Sum_probs=125.6
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhh--cCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQ--LDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
|.+++..+..++....-.++..|++.|+.+. +|+++.+.+...+.+..+..++.++++++.||+ |+||++..+.++.
T Consensus 140 ~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l~ 218 (310)
T TIGR01272 140 THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFLA 218 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHH
Confidence 4456666677776666777889999999854 799999999999999999999999999999998 9999988887776
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
+++.++.... .+.. ......+.|++.+...|...++..+.+|++. +++.
T Consensus 219 ~~~~~l~~~~-----------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~as 267 (310)
T TIGR01272 219 VLLSIGAALT-----------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGS 267 (310)
T ss_pred HHHHHHHHHc-----------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhH
Confidence 6665444332 1111 2234557899999999999999999888753 4444
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAV 223 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~ 223 (559)
++. ....+|+.+.|.+.|.+.|..|.+.+|++..+
T Consensus 268 ai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 268 GIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 554 56779999999999999999998888875554
No 161
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.13 E-value=6.3e-10 Score=117.32 Aligned_cols=167 Identities=11% Similarity=-0.052 Sum_probs=129.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+|..+...++....+.....+++.|++ +.|.+..+.+.+.+...+...+..++.|++.||+ |+|+.+..+.+...+
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44666666666666777777788899985 5899999999999988888888999999999998 999999988887777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+..... ++.+.+++..++.|++.+...+....+..+. ++++ +++..+.
T Consensus 283 ~~~~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~ 332 (382)
T PRK11128 283 RWGLMGST-----------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQAL 332 (382)
T ss_pred HHHHHHhh-----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHH
Confidence 76655543 3567777888889999888888888877776 4443 6777887
Q ss_pred hh-HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHH
Q 008623 190 FY-FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAV 229 (559)
Q Consensus 190 ~~-~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~ 229 (559)
++ ....+|..+||.++|.+.|..|+. .++..+++.++++
T Consensus 333 ~~~~~~~~g~~ig~~i~G~l~~~~g~~-~~~~~~~~~~~~~ 372 (382)
T PRK11128 333 YSALAMGGSIAIMTVLSGFLYQHLGAG-VFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHH
Confidence 65 556778899999999999998874 5555555444443
No 162
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.13 E-value=8.1e-10 Score=113.25 Aligned_cols=81 Identities=15% Similarity=0.007 Sum_probs=68.6
Q ss_pred chhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc---------
Q 008623 141 AQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN--------- 211 (559)
Q Consensus 141 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~--------- 211 (559)
.++..+.++.++.|.|.+...+..++++++..|+++ +++.+++.+.+..+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 467889999999999999999999999999999886 88899999999999999999999977632
Q ss_pred -------cCchhhhHHHHHHHHH
Q 008623 212 -------EGWGWGFGIPAVAMAI 227 (559)
Q Consensus 212 -------~g~~~~f~i~~~~~~i 227 (559)
..|+++|++.+...++
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~ 104 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAV 104 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHH
Confidence 3588888855544333
No 163
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.13 E-value=7.7e-10 Score=117.51 Aligned_cols=172 Identities=12% Similarity=-0.127 Sum_probs=126.0
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.++......++.....+......|.|+.+++|.++.+.+.......++..++.++.|+++||+ |+|+.+..+.++..++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 355555555555566666667788899889999999998888777788889999999999998 9999999988877777
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
........... ..+.+.+.+..++.|+|.+...+..........| ++ |++..+.+
T Consensus 295 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~g~~~~~~ 349 (406)
T PRK15402 295 LLLAALATVIS------------------SHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSD-VS------KGTVSAAM 349 (406)
T ss_pred HHHHHHHHHcc------------------cccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhcc-cc------ccHHHHHH
Confidence 76665441101 1234556677778888888776666554433333 44 89999999
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIA 228 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~ 228 (559)
++...+|..+|+.+.+++.+..++.......++..++.
T Consensus 350 ~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 350 GMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 99999999999999999988877665444444333333
No 164
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.13 E-value=7.8e-10 Score=119.55 Aligned_cols=185 Identities=18% Similarity=0.153 Sum_probs=148.9
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchh--HHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRY--WTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~~ 107 (559)
|.+...++..++.+-+...+......|..+++|++..+...+.....+.+.++..++|++.||+ |.| ++++.+.++.
T Consensus 281 ~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 281 RQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLILW 359 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHHHH
Confidence 5566677788888889999999999999999999999999999999999999999999999998 998 8888777665
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.+..+.-.+ ...+.. ..-.+.+.+++.-++.|+..|...+..-++.+|+.|+++ .+..+
T Consensus 360 ~~i~~~g~~-G~~~~~--------------~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efF 418 (477)
T PF11700_consen 360 IIIPLYGLF-GFWPSF--------------FGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFF 418 (477)
T ss_pred HHHHHHHHH-Hhhhcc--------------cCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHH
Confidence 322222111 000110 011356667777889999999999999999999999987 79999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhcc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
|++.......+.+||++.|.+.+..| .|+.+....++.++++++++...
T Consensus 419 gly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 419 GLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999998887 88888877777777777665443
No 165
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.11 E-value=1e-09 Score=118.75 Aligned_cols=177 Identities=16% Similarity=-0.024 Sum_probs=123.5
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHH--------H
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTI--------A 101 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~--------~ 101 (559)
+.+|...+..++....++.+..++|.|+++.+|++..+.++..+...++..++.+++|+++||+ ++|+.. .
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~~ 339 (465)
T TIGR00894 261 LPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKIF 339 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHHH
Confidence 4578888889999999999999999999999999999999999999999999999999999997 654321 1
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhh
Q 008623 102 IFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKK 181 (559)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (559)
.+......+....... . . ..+.....+...+.+.+.++..+.......|..|+ .
T Consensus 340 ~~~~~~~~~~~~~~~~-~-~------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~----- 393 (465)
T TIGR00894 340 NGIGGLGPGIFAYALP-Y-L------------------SAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F----- 393 (465)
T ss_pred HHHHHHHHHHHHHHHH-H-c------------------CCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H-----
Confidence 1111111111111111 0 0 01223333334444445554455555555666665 3
Q ss_pred ccccchhhhhHHHhHHHHHHhhhhhhhcccc---CchhhhHHHHHHHHHHHHHHHh
Q 008623 182 HKSSFFNWFYFSINIGALIASSVLVWIQDNE---GWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 182 ~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~---g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
++...++.+...++|+.++|.+.|++.+.. +|..+|.+.++..+++.+....
T Consensus 394 -~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 394 -LGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLI 448 (465)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeee
Confidence 899999999999999999999999887653 3888888887776666655443
No 166
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.09 E-value=8e-10 Score=117.90 Aligned_cols=164 Identities=9% Similarity=0.004 Sum_probs=116.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhh-hcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHH-HHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKH-QLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWT-IAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-~~~~~~~~ 107 (559)
+.+|......++....++++..++|.|+++ ..|++..+++.+.....++..++.+++|+++||+ +||+. +....++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~ 320 (412)
T TIGR02332 242 PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFA 320 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHH
Confidence 356777777888888899999999999976 3577888899999999999999999999999998 87764 33333333
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.++. .. . .+......+..+.++|.....+.......|.+|+++ |++++
T Consensus 321 ~~~~~~~-~~---~-------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~ 371 (412)
T TIGR02332 321 AAGWLLA-SA---T-------------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAI 371 (412)
T ss_pred HHHHHHH-Hh---c-------------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHH
Confidence 3332211 11 0 111111112222333333223334455567788776 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAV 223 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~ 223 (559)
++.+...++|++++|.+.|.+.+..| |++.|.+.++
T Consensus 372 g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~ 408 (412)
T TIGR02332 372 AVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAA 408 (412)
T ss_pred HHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHH
Confidence 99999999999999999999999875 9998876654
No 167
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.09 E-value=1e-09 Score=116.18 Aligned_cols=171 Identities=10% Similarity=0.062 Sum_probs=125.7
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhc---CCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQL---DQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
.++..+...++....+.....+++.|+++.+ +.+....+.+.+...+...++.+..|++.||+ |||+.++++.++.
T Consensus 216 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l~ 294 (396)
T TIGR00882 216 KFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTIM 294 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHHH
Confidence 3455555555555555555567888887765 45556678888888888899999999999998 9999999988877
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++....... .+.+.+.+.+.+.|++..........+..+..|++. +++..
T Consensus 295 ~l~~~~~~~~-----------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~ 345 (396)
T TIGR00882 295 SVRIIGSSFA-----------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIY 345 (396)
T ss_pred HHHHHHHHhc-----------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEee
Confidence 7766655443 345566677778887765544444455666666664 67766
Q ss_pred hh-hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 188 NW-FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 188 ~~-~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
+. ++...++|+.++|.++|++.+..||+.+|.+.+++.++..+.
T Consensus 346 ~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 346 LIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 66 678889999999999999999999999999887765554443
No 168
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=3.5e-09 Score=109.74 Aligned_cols=153 Identities=11% Similarity=-0.014 Sum_probs=110.5
Q ss_pred hhHhhHHHHHHHHH---HhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAY---YGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 33 ~~~~~~~~~~~~~~---~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|+.++...+.+.+. +.-.....+|..+-+| +...+-|...+|.+.+....+.+-|+.||+ |-|.+..++..+..+
T Consensus 44 W~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~i 121 (480)
T KOG2563|consen 44 WVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNGI 121 (480)
T ss_pred hHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHHH
Confidence 44444444443333 2222446677777778 777788899999999999999999999999 999999999999998
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhH--HHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSA--TFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
|...=..+ +.|.+. +.++ ....+..+.+.+.-.+...-+-..+-+|++++ |+.+.
T Consensus 122 Ga~Ir~is-s~p~v~----------------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~ 178 (480)
T KOG2563|consen 122 GAWIRLIS-SLPFVP----------------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIAT 178 (480)
T ss_pred HHHHhhhc-cCcccc----------------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhh
Confidence 88776655 233221 2333 56677777777777776666677788999998 99998
Q ss_pred hhhhHHHhHHHHHHhhhhhhhcc
Q 008623 188 NWFYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~ 210 (559)
.+-.++..+|..+|.++...+..
T Consensus 179 ~~~v~~n~LGvavg~llppilV~ 201 (480)
T KOG2563|consen 179 VLGVMGNPLGVAVGFLLPPILVP 201 (480)
T ss_pred hHHHhcchHHHHHHhhccceecC
Confidence 88777777777777666555543
No 169
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.08 E-value=3e-10 Score=121.62 Aligned_cols=162 Identities=17% Similarity=0.090 Sum_probs=122.8
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++..++..++...+++....+.+.|.+..+| +..+.+.+.....+...++.++.|+++||+ |||+++..+.++.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~~ 299 (437)
T TIGR00792 222 DQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMVL 299 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 446666777777777777766666666665666 555677777788899999999999999998 999999999887777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhh-hccccchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEK-KHKSSFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~ 188 (559)
+.+...+.. .+.+.+.+..++.+++.+...+...++++|..|.++..+. ++++..++
T Consensus 300 ~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 357 (437)
T TIGR00792 300 GYLIFFFAG----------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYS 357 (437)
T ss_pred HHHHHHHcc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHH
Confidence 766655430 2344556666778888888888889999998875432111 23688889
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCch
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWG 215 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~ 215 (559)
++++...+|..+++.+.|++.+..||.
T Consensus 358 ~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 358 VRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999999998777763
No 170
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.07 E-value=1.9e-09 Score=113.61 Aligned_cols=171 Identities=10% Similarity=0.035 Sum_probs=116.8
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
.|......++...+.+....+++.|+.+.+|+++.+.+.+.+...++..++.++.|++.||+ |+|+.+..+.++..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 45554545555555556667788898888999999999999999999999999999999998 99999988887777766
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccc-cccCCCCcchHhhhccccchhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSY-GADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
+...... ++.+...+..++.+++.+...+..... ..+..+++. ++.+ ..
T Consensus 280 ~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~ 329 (382)
T PRK10091 280 LMLFFFG----------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GG 329 (382)
T ss_pred HHHHHHH----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HH
Confidence 5543321 122333444445555544443433332 333333322 3333 34
Q ss_pred hHHHhHHHHHHhhhhhhhccc-cCchhhhHHHHHHHHHHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQDN-EGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~-~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
+...++|..+||.++|++.+. .+|++.+.+.++..++.+..+.
T Consensus 330 ~~~~~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 330 QIAFNLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 567789999999999999885 6799998888766555544433
No 171
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.06 E-value=2.7e-09 Score=113.88 Aligned_cols=148 Identities=14% Similarity=0.038 Sum_probs=108.0
Q ss_pred HHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCC
Q 008623 43 RLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSG 122 (559)
Q Consensus 43 ~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (559)
....+.+..++|.|+++ .|++..+.+.+.+...++..++.++.|++.||+ |||+.+..+.++..+..+.+... +.
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~---~~ 318 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI---PQ 318 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---cc
Confidence 33444566788999875 699999999988999999999999999999998 99999988877665554443322 11
Q ss_pred CCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHh
Q 008623 123 LKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIAS 202 (559)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp 202 (559)
.....+....+..+++..+..+..+.++.|.+|++. |++++++.+...++|+.++|
T Consensus 319 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp 374 (426)
T PRK12307 319 ------------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNS 374 (426)
T ss_pred ------------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHH
Confidence 112222222222223333344566778899999886 99999999999999999999
Q ss_pred hhhhhhccccCchhhhH
Q 008623 203 SVLVWIQDNEGWGWGFG 219 (559)
Q Consensus 203 ~i~~~l~~~~g~~~~f~ 219 (559)
.+.|++.+..|+....+
T Consensus 375 ~~~g~l~~~~g~~~~~~ 391 (426)
T PRK12307 375 MAATWLGITMGLGAALT 391 (426)
T ss_pred HHHHHHHHcccHHHHHH
Confidence 99999999888665433
No 172
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.05 E-value=1.1e-09 Score=113.35 Aligned_cols=155 Identities=11% Similarity=0.035 Sum_probs=127.6
Q ss_pred cchhhHhhHHHHHHHHHHhhh-hhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMS-TNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
|.++..+...++....+++.. .+.|.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 345666666666666666666 7788888878999999999999999999999999999999998 99999888876666
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++........ .+.+.+.+..++.|++.+...+...+++.|.+|+++ |++..+
T Consensus 289 ~~~~~~~~~~----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~ 340 (365)
T TIGR00900 289 LAILVVGLTP----------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFG 340 (365)
T ss_pred HHHHHHHhhc----------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHH
Confidence 6655554430 125666777888999999988999999999999886 999999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccC
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEG 213 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g 213 (559)
+++...++|..++|.++|++.|..|
T Consensus 341 ~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 341 AQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999987654
No 173
>PRK10133 L-fucose transporter; Provisional
Probab=99.04 E-value=2.4e-09 Score=115.15 Aligned_cols=167 Identities=16% Similarity=0.171 Sum_probs=125.8
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHH-hhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYF-KHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
.++...+..++.....++...+++.|+ ++.+|+++.+++.....+.++..++.+++|++.||+ |||+++..+.++.++
T Consensus 259 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~ 337 (438)
T PRK10133 259 HWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMA 337 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 344555556666677777778889896 567899999999999999999999999999999998 999999888776655
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.....+. + +. .......+.|++.+...|...+...+.+|++ .+.+.++
T Consensus 338 ~~~~~~~~---~--------------------~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l 386 (438)
T PRK10133 338 LCLISAFA---G--------------------GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSF 386 (438)
T ss_pred HHHHHHHc---C--------------------Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhH
Confidence 54443332 1 11 1244566789999999999999999998875 3555555
Q ss_pred hhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~ 230 (559)
..+ ..+|+.++|.+.|.+.+..| -+..|.+..++.+..++
T Consensus 387 ~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~ 427 (438)
T PRK10133 387 IVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFI 427 (438)
T ss_pred HhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 543 44688888889999999887 67888766655444443
No 174
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.04 E-value=1.7e-09 Score=114.94 Aligned_cols=176 Identities=11% Similarity=0.081 Sum_probs=114.9
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHH-HHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWS-GTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
.++..+...++..........+.+.|+.+++|+++.+.+.+..... +...++.+++|++.||+ |||+.+..+.+..++
T Consensus 210 ~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~l 288 (402)
T PRK11902 210 GAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQAV 288 (402)
T ss_pred CHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHH
Confidence 3444445445544443333344556777889999999999887654 46788899999999998 999988777766555
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHH----HHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVAL----YLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
..+........+ .+.+.+.+.. +..+++.+...+....++.+.+|.++ +
T Consensus 289 ~~l~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~-- 341 (402)
T PRK11902 289 SNLGYWVLAVTP-------------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ------Y-- 341 (402)
T ss_pred HHHHHHHHHhcC-------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH------H--
Confidence 443332211101 1233333333 34555566666777777777777553 3
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
++++...++|..+++.++|++.|..||+..|.+.+++.+++++..+...
T Consensus 342 --~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 342 --ALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444455677776667899999999999999988877777666554433
No 175
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.04 E-value=3.9e-09 Score=112.99 Aligned_cols=186 Identities=12% Similarity=0.039 Sum_probs=129.7
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
..|.+.+..++...++.++..++|.|+++.+ +............+...+..|++|+++||+ |+||+++++.+...+.
T Consensus 253 ~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i~ 329 (462)
T PRK15034 253 HLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAIF 329 (462)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHHH
Confidence 4688889889988888888889999998765 333333334455788899999999999999 9999999998876666
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcch----------H--
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADE----------A-- 178 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~----------~-- 178 (559)
.....+. +|. ....+.+.+.+..+.+.++.|.-+.+..-++.+.+|+++. +
T Consensus 330 ~~~~~l~--lp~---------------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~ 392 (462)
T PRK15034 330 SALLFLT--LPG---------------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQA 392 (462)
T ss_pred HHHHHHH--hcc---------------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHH
Confidence 5443332 122 1123455566655556677777777777788888874100 0
Q ss_pred ---hhhccccchhhhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhcc
Q 008623 179 ---EKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 179 ---~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
.+++.+...|+......+|+.+-|.+.|...+..| +...|+...+..++++++.|...
T Consensus 393 ~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~y 454 (462)
T PRK15034 393 QREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLVY 454 (462)
T ss_pred hhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 01124567778888889999999988887776655 88888877777666666555443
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.04 E-value=3.1e-09 Score=112.32 Aligned_cols=175 Identities=15% Similarity=0.006 Sum_probs=123.4
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHH-HHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSG-TCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
.++..+...++...+......+.+.|+++ .|+++.+.+.+...... ...++.+++|++.||+ |+|+.+..+.++..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 35555666667777777777888899975 79999999999888764 5566789999999998 999999887765533
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCC-cchHhhhccccchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDD-ADEAEKKHKSSFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~ 188 (559)
..+....... .. ...+...++....+.+++.+...+...+...+..++ +. +++.++
T Consensus 287 ~~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~ 343 (390)
T TIGR02718 287 LALLWFAQAA-FW----------------LAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVT 343 (390)
T ss_pred HHHHHHHHHH-cc----------------cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHH
Confidence 3222211100 00 001222333334444555666666666776677665 44 899999
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHH
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVV 230 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~ 230 (559)
+.+...++|..++|.++|++.+..||+..|...+++.+++++
T Consensus 344 ~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 344 AVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888877765555543
No 177
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.03 E-value=3.8e-09 Score=113.20 Aligned_cols=163 Identities=18% Similarity=0.186 Sum_probs=134.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+..++...++...+........+.|.+..+|.+ ...+.+.....+...++.++.++++||+ |||+++..+.++.++
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAAL 302 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHHH
Confidence 45667777888888888888888888888888877 5667777888999999999999999999 999999999999998
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc-cccchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH-KSSFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~ 188 (559)
+.+...+... .+.+.+++..++.|++.+...+...++++|..+.++..+.++ .+..++
T Consensus 303 ~~~~~~~~~~---------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 303 GFLLLFFLGP---------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHHHHHHh---------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 8888776610 357788888899999999999999999999998765433222 366778
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCch
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWG 215 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~ 215 (559)
.+.+...+|..+++.+.+.+.+..|+.
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcC
Confidence 899999999999999998887666544
No 178
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.02 E-value=2.5e-08 Score=106.96 Aligned_cols=353 Identities=15% Similarity=0.100 Sum_probs=204.4
Q ss_pred hhHHHHHhhhcCCChh-hhHHHHHHH----HHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCC
Q 008623 51 TNLVRYFKHQLDQSSS-TASKNVLDW----SGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKP 125 (559)
Q Consensus 51 ~~l~~yl~~~lg~s~~-~~~~~~~~~----~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (559)
.....+.....+.+.. +.+...... .+...+..+.-|.++||+ |||..+.+..+...+..+...+.
T Consensus 42 ~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~~~~~l~~~~~~~~-------- 112 (463)
T KOG2816|consen 42 TNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPLFGTILPALCLLFQ-------- 112 (463)
T ss_pred hhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHHHHHHHhHHHHHHH--------
Confidence 4455555555544332 234444444 578888899999999999 99999999888777776666544
Q ss_pred CCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 126 VCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
.+++++.. -..-+.+.......++++|...+++ |...+++.+.....+..++|.++
T Consensus 113 -----------------~~~~~~~~-~l~g~~~~~~s~~~a~vadis~~~~------R~~~~gll~~~~~~~~~~~p~~~ 168 (463)
T KOG2816|consen 113 -----------------GYWFFLLL-GLSGGFSAIFSVGFAYVADISSEEE------RSSSIGLLSGTFGAGLVIGPALG 168 (463)
T ss_pred -----------------HHHHhhhc-ccccchhhhhhhhhhheeeccchhH------HHHHHHHHHHHHHHHHhHHHHHH
Confidence 13333311 1222334455677888999998886 99999999999999999999999
Q ss_pred hhhccccCchhhhHHHHHHHHHHHHHHHhccccccccCCCC-ChhHHHHHHHHHHHhhccccCCCccchhhhcccccccc
Q 008623 206 VWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRNQKPGG-SPLTRICQVVAASIRKHKVELPADKSLLYETADAESNI 284 (559)
Q Consensus 206 ~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 284 (559)
+.+.+..|...+|.++++..++..+-.....++..+++.++ .+.++
T Consensus 169 ~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~--------------------------------- 215 (463)
T KOG2816|consen 169 GYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE--------------------------------- 215 (463)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc---------------------------------
Confidence 99999999999999999888777776666555443332221 10000
Q ss_pred cCCcccCCCCccchhhhhhhhhccccccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHHHHhcccch-hhhhccccc
Q 008623 285 TGSRKLDHTKDFSFFDKAAVEIQSDNIKESVNPWRLCTVTQVEELKAIVRLLPIWATGIIFSAVYSQMSS-LFVLQGERM 363 (559)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 363 (559)
+..++..++. ...+++...+ ....|+.+.++ ............-.. .. ..++
T Consensus 216 -----~~~~~~~~~~--------------~~~~~~~~~~--~~~~r~~l~l~---l~~~~~~~~~~~~~~~~~---~~yl 268 (463)
T KOG2816|consen 216 -----LTPGSLDSSH--------------VADAFQSLTK--VGPDRLLLLLL---LVAFLSSLPEAGGASDVL---LLYL 268 (463)
T ss_pred -----cCCCcccchh--------------hhhhhhhhcc--cCCCccchHHH---HHHHHHHHHHhcCceeEE---EEEE
Confidence 0000000000 0000100000 11222222211 111111111111111 11 1122
Q ss_pred cCCCCCcccee-CccccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 008623 364 DTHVGNSSFKI-PPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRM 442 (559)
Q Consensus 364 ~~~~g~~~~~~-~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~ 442 (559)
+..++ ++- .-+.+.........+.+ .+..|+..+... ..+.+..|+..-.+...+.++.+
T Consensus 269 ~~~f~---w~~~~~s~~~~~~~~~~~i~~----l~~~~~l~~~l~------~~~~i~lGl~~~~~~~~~~af~~------ 329 (463)
T KOG2816|consen 269 KAKFG---WNKKEFSDLLSLVSILGIISQ----LLLLPLLSSILG------EKRLISLGLLSEFLQLLLFAFAT------ 329 (463)
T ss_pred eeecC---cCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHh------hhhHhhHHHHHHHHHHHHHHHhc------
Confidence 33333 111 11112222222222222 122223333221 11366788888888888888754
Q ss_pred hhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhc
Q 008623 443 VREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
..|.+. ...........+.|...+++..+++++.+|.+.++.....++.+.++|.+-+.+...+.
T Consensus 330 --------------~~w~~~-~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 330 --------------ETWMMF-AAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTL 394 (463)
T ss_pred --------------cchhhh-HHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 223323 23444455678899999999999999999999999999999999999999999877654
Q ss_pred cCCCCCCCCCCCC
Q 008623 523 KNGNLGWIPDNLN 535 (559)
Q Consensus 523 ~~~~~~w~~~~~~ 535 (559)
.|.|+...
T Consensus 395 -----~~~~~~~~ 402 (463)
T KOG2816|consen 395 -----DDLPGFLF 402 (463)
T ss_pred -----Hhcccccc
Confidence 45565433
No 179
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.01 E-value=3.1e-09 Score=110.62 Aligned_cols=156 Identities=14% Similarity=0.048 Sum_probs=117.7
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccc-hhHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLG-RYWTIAIFSIIYV 108 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-rr~~~~~~~~~~~ 108 (559)
|.++......++....+++...++|.|+++ .|.+..+.+.+.+...++..++.++.|+++||+ + ||+.+..+.++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~-~~~~~~~~~~~~~~~ 274 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRV-KDQRGIVAVLAVLQL 274 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhh-ccchHHHHHHHHHHH
Confidence 345656666666777788888999999975 799999999999999999999999999999998 6 5556667776666
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+.+.+. +. .... ....+.|++.+...|...+.+.+..++++ +++...+
T Consensus 275 ~~~~~~~~~---~~------------------~~~~---~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~ 325 (355)
T TIGR00896 275 VGLCGLLFA---PM------------------HGLW---AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSA 325 (355)
T ss_pred HHHHHHHHh---hh------------------hHHH---HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHH
Confidence 666655543 11 1111 13457789998888887777766555433 3688888
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccC-chh
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEG-WGW 216 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g-~~~ 216 (559)
+.+...++|..++|.+.|++.++.| |.+
T Consensus 326 ~~~~~~~~~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 326 MAQSIGYLLAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 8888889999999999999998776 543
No 180
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.01 E-value=2.2e-09 Score=117.38 Aligned_cols=154 Identities=9% Similarity=-0.029 Sum_probs=128.4
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+.......++....+++...++|.|+++.+|+++.+++.......+...++.++.|++.||+ |||+.+..+.++..+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~~ 337 (495)
T PRK14995 259 RIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSAL 337 (495)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHH
Confidence 4556666777777788888888999999999999999999999999999999999999999999 999999888887777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+.+.... ...+.+...+..++.|+|.|...+.....+.+..|+++ ++.+.++
T Consensus 338 ~~~~l~~~~--------------------~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~ 391 (495)
T PRK14995 338 SFYGLAMTD--------------------FSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAI 391 (495)
T ss_pred HHHHHHHhc--------------------CCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHH
Confidence 766554431 01234445566788899999888888888888888886 8999999
Q ss_pred hhHHHhHHHHHHhhhhhhhcc
Q 008623 190 FYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~ 210 (559)
++...++|+.+|+.+.+.+.+
T Consensus 392 ~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 392 ETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998764
No 181
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.01 E-value=4.3e-11 Score=131.08 Aligned_cols=191 Identities=14% Similarity=0.183 Sum_probs=3.0
Q ss_pred HHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCC
Q 008623 44 LAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGL 123 (559)
Q Consensus 44 ~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (559)
...+++......-+++.+++++++.|++.+.+.++..+..++..++++|. -|-|-+-.|.++++++.+++++-+++..-
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 66666666666678889999999999999999999999999999999986 66667777888888888887643221110
Q ss_pred CC-------CCCCCCCCccc---------------c-----cCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcc
Q 008623 124 KP-------VCHGPRGEETC---------------Q-----VTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDAD 176 (559)
Q Consensus 124 ~~-------~~~~~~~~~~~---------------~-----~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 176 (559)
.+ .+.....++.| . ........++++.++.|+|.....+...+|+=|..++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 00 00000011112 0 111235678899999999999999999999999998886
Q ss_pred hHhhhccccchhhhhHHHhHHHHHHhhhhhhhcc---------------------ccC-chhhhHHHHHHHHHHHHHHHh
Q 008623 177 EAEKKHKSSFFNWFYFSINIGALIASSVLVWIQD---------------------NEG-WGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 177 ~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~---------------------~~g-~~~~f~i~~~~~~i~~~~~~~ 234 (559)
-+...|+.+.+..+|.++|.++++.+.. +.| |...|.+.+++.++..+-++.
T Consensus 175 ------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 175 ------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7888999999999999999988876532 123 777788887766666665555
Q ss_pred ccccccc
Q 008623 235 GTRLFRN 241 (559)
Q Consensus 235 ~~~~~~~ 241 (559)
.+|+.+.
T Consensus 249 FPk~lp~ 255 (539)
T PF03137_consen 249 FPKKLPG 255 (539)
T ss_dssp -------
T ss_pred CCccCCC
Confidence 5555443
No 182
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.00 E-value=2.3e-09 Score=116.26 Aligned_cols=156 Identities=15% Similarity=0.150 Sum_probs=128.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++..+...++....+++...++|.|+++.+|.++.+++.......++..++.++.|++.||+ |||+.+..+.++.++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~~ 333 (485)
T TIGR00711 255 RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYAV 333 (485)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHHH
Confidence 4456667777778888888889999999999999999999999999999999999999999998 999999998887777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+...+.+.. .+ +.+.+.+....++.|+|.+...+.......+..|+++ |+++.++
T Consensus 334 ~~~~~~~~~-~~------------------~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~ 388 (485)
T TIGR00711 334 GFYWRAFTF-TP------------------DTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSL 388 (485)
T ss_pred HHHHHhccC-CC------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHH
Confidence 776655220 01 1234555666778899888877777777778888776 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccc
Q 008623 190 FYFSINIGALIASSVLVWIQDN 211 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~ 211 (559)
++...++|+.+|+.+.+.+.++
T Consensus 389 ~~~~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 389 SNFTRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988764
No 183
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.99 E-value=4.5e-09 Score=110.09 Aligned_cols=161 Identities=11% Similarity=0.098 Sum_probs=116.2
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.++...+...+....++....+.|.|+++++|.++.+.+.+.....+...++.++.|++.||+ |||+.+..+.++..++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~~ 285 (385)
T TIGR00710 207 MFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAVS 285 (385)
T ss_pred hhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 345555555566666777778889999989999999999999999999999999999999998 9999998887777776
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+.+......+ ......+.+...+.|++.+...+.......|..|+ + ++++.+++
T Consensus 286 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~------~g~~~~~~ 340 (385)
T TIGR00710 286 AVLLEITAILG------------------LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPH-V------AGTASALF 340 (385)
T ss_pred HHHHHHHHHhc------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc-c------chHHHHHH
Confidence 66555431100 01233445556677888888888888888888774 3 78999988
Q ss_pred hHHHhH-HHHHHhhhhhhhccccCchhhh
Q 008623 191 YFSINI-GALIASSVLVWIQDNEGWGWGF 218 (559)
Q Consensus 191 ~~~~~i-G~~igp~i~~~l~~~~g~~~~f 218 (559)
+..... |+..+| +.+.+.+..+|...+
T Consensus 341 ~~~~~~~g~i~~~-~~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 341 GTLRLVLGAIVGY-LVSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHH-HHHhccccChHHHHH
Confidence 777655 555555 455555544444433
No 184
>TIGR00895 2A0115 benzoate transport.
Probab=98.99 E-value=1.7e-09 Score=113.44 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=113.9
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
..+.+....++....++....++| ++.+++|.+..+.+.+.....++..++.++.|+++||+ |||+.+....+...+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 328 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALLLLLGAVFA 328 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHHHHHHHHHH
Confidence 344455556677777777788888 66678999999999999999999999999999999998 9985544433333222
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+..... .+.+...+..++.|++.+...+...+++.|.+|+++ |+++.++.
T Consensus 329 ~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 379 (398)
T TIGR00895 329 VLVGSTL-----------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWA 379 (398)
T ss_pred HHHHHHh-----------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHH
Confidence 2222211 234455666778888888888999999999999887 99999999
Q ss_pred hHHHhHHHHHHhhhhhhh
Q 008623 191 YFSINIGALIASSVLVWI 208 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l 208 (559)
+....+|..+||.++|++
T Consensus 380 ~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 380 IGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHhHHhc
Confidence 999999999999999876
No 185
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.97 E-value=3.1e-09 Score=116.17 Aligned_cols=172 Identities=12% Similarity=0.081 Sum_probs=142.8
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
+...+...++.++....+...+|.+.++.+|.++...|++.+.+.++..++.++.+++.+|+ ++++.+..+.++.+++.
T Consensus 220 l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~~~ 298 (524)
T PF05977_consen 220 LRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFALAL 298 (524)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHHHH
Confidence 34444445555555556667789999999999999999999999999999999999999998 99999888888888777
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+.+++. .+.+...+..++.|++.........+.+-+..|++. |||.+++++
T Consensus 299 ~~lal~-----------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~ 349 (524)
T PF05977_consen 299 LLLALS-----------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQ 349 (524)
T ss_pred HHHhcc-----------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHH
Confidence 777665 456677777888898888888888888889999887 999999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHH
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
+....+..+|.++.|.+.+..|-+.++.++++..+++.++..
T Consensus 350 ~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 350 MVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999888888776655555443
No 186
>PRK10054 putative transporter; Provisional
Probab=98.96 E-value=5.1e-09 Score=111.07 Aligned_cols=173 Identities=13% Similarity=-0.023 Sum_probs=127.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhh--hcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKH--QLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~ 107 (559)
|.++......++....+..+..+++.|+.. +.+.+....+.+.....+......++.|++.||+ ++|+.+..+.++.
T Consensus 206 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~~ 284 (395)
T PRK10054 206 KALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLCF 284 (395)
T ss_pred ceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHHH
Confidence 345555566666666666565677777754 3455566677777777777777788899999998 9999998888777
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.....+.. ++.+.+.+...+.++|.+...|...+++.+..|++. |++++
T Consensus 285 ~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~ 336 (395)
T PRK10054 285 VIGLVGFIFSG----------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYF 336 (395)
T ss_pred HHHHHHHHHcc----------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehH
Confidence 77766554330 234455667778899988878888888999999876 88888
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
+..+ ...+|..+||.++|++.|+.|....|.+.+.+..++.+..
T Consensus 337 ~~~~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 337 SAQS-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 8654 5668999999999999999998888876655444444433
No 187
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.96 E-value=2.7e-08 Score=107.83 Aligned_cols=163 Identities=13% Similarity=0.078 Sum_probs=113.1
Q ss_pred hhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCC
Q 008623 48 GMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVC 127 (559)
Q Consensus 48 ~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (559)
.+..+.|.+. +++|++....++......+...++.+++|+++||+ |||+.++.+.++.+++.+.+..... +.
T Consensus 289 ~~~~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~-~~----- 360 (479)
T PRK10077 289 VVLYYAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFY-TQ----- 360 (479)
T ss_pred HHHHHHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHh-cC-----
Confidence 3333445444 56888877777777778888899999999999998 9999999999888888777654411 00
Q ss_pred CCCCCCcccccCcchhHHHHHHHHHHHHhccC-CCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhh
Q 008623 128 HGPRGEETCQVTDAQSATFFVALYLIALGTGG-IKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLV 206 (559)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~ 206 (559)
...........+.+++.+. ..|...+++.|.+|+++ |++++++.+...++|..+++.+.+
T Consensus 361 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 361 -------------APGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred -------------cccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 1111222233334443433 34677899999999887 999999999888888888755544
Q ss_pred ------hhccccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 207 ------WIQDNEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 207 ------~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
++.+..+|+..|++.++..+++.+..+...+
T Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 422 MMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred HHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 4456778888888777665555555444443
No 188
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.95 E-value=7.5e-09 Score=113.35 Aligned_cols=168 Identities=15% Similarity=0.090 Sum_probs=109.4
Q ss_pred HHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHH------------HHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHH
Q 008623 38 NECCERLAYYGMSTNLVRYFKHQLDQSSSTASK------------NVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 38 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~------------~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~ 105 (559)
..++..+.+|++..++|.+++ +.|++..+.+. ......++..++.+++++++||+ |||++++.+.+
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~~ 373 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGFF 373 (502)
T ss_pred HHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHHH
Confidence 445566778888888888885 67876543221 12233445556778899999998 99999988887
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+..++.+.+..... +. ..+. .+....+...++..+..+....+.+|.+|.+. |++
T Consensus 374 ~~~~~~~~l~~~~~-~~-----------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~ 428 (502)
T TIGR00887 374 ILTVLFFVLGFAYN-HL-----------------STHG-FLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RST 428 (502)
T ss_pred HHHHHHHHHHHHHH-hc-----------------chhH-HHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHH
Confidence 76666655544310 00 0111 11111112222233344566777899999997 999
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccc----------cCchhhhHHHHHHHHHHHHHH
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDN----------EGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~----------~g~~~~f~i~~~~~~i~~~~~ 232 (559)
+.++.+....+|++++|.+.+++.+. .++...|++.+++.+++.+..
T Consensus 429 ~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 485 (502)
T TIGR00887 429 AHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFT 485 (502)
T ss_pred HHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988773 334456666665555554433
No 189
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.92 E-value=1e-08 Score=110.35 Aligned_cols=178 Identities=15% Similarity=0.009 Sum_probs=121.7
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccc-------hhHHHH-
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLG-------RYWTIA- 101 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G-------rr~~~~- 101 (559)
+.+|.+.+..++.+.+++.+..++|.|+.+.+|++..+.|++.++..+.+.+..+++|.++||... +||.+-
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 468999999999999999999999999999999999999999999999999999999999999822 112221
Q ss_pred HHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhh
Q 008623 102 IFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKK 181 (559)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~ 181 (559)
++....++.++.+++. +. .+.+..++...+.-...|...+....-..|..|+.
T Consensus 338 i~~~~~ai~l~~l~~~---~~------------------~~~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~------ 390 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFT---SD------------------EHRLLAVILLTIAIGLSGFNISGFYKNHQDIAPQH------ 390 (466)
T ss_pred HHHHHHHHHHHeeeec---CC------------------CcchHHHHHHHHHHHHcccchhhhHhhhhhccchH------
Confidence 2222233333333322 11 11211111111111112222222222223334433
Q ss_pred ccccchhhhhHHHhHHHHHHhhhhhhhccc---cCchhhhHHHHHHHHHHHHHHHhc
Q 008623 182 HKSSFFNWFYFSINIGALIASSVLVWIQDN---EGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 182 ~r~~~~~~~~~~~~iG~~igp~i~~~l~~~---~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
-+..+++.+...++.++++|.+.+.+.+. ..|++.|.+.+...+++.+.+.+.
T Consensus 391 -a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 391 -AGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEe
Confidence 68899999999999999999999998842 269999999998888777665544
No 190
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.92 E-value=1.3e-08 Score=108.05 Aligned_cols=154 Identities=12% Similarity=0.056 Sum_probs=109.5
Q ss_pred hhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCC
Q 008623 48 GMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVC 127 (559)
Q Consensus 48 ~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (559)
....++|.|+++..+ ++.+.+.+.+...+.........+++.||.++.++.+..+.++..++.+++...
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~---------- 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---------- 294 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh----------
Confidence 345678899877655 667888887777766655555556666554376777777777777776655544
Q ss_pred CCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhh
Q 008623 128 HGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVW 207 (559)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~ 207 (559)
++.+.+.+...+.+++.+...|...+++.|..|+++ |++.+++++...++|..+||.++|+
T Consensus 295 -------------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~ 355 (400)
T PRK11646 295 -------------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGW 355 (400)
T ss_pred -------------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHH
Confidence 234445555667788888888888999999999887 9999999999999999999999999
Q ss_pred hcccc---C-chhhhHHHHHHHHHHHHH
Q 008623 208 IQDNE---G-WGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 208 l~~~~---g-~~~~f~i~~~~~~i~~~~ 231 (559)
+.+.. + ...++.+.+++.+++++.
T Consensus 356 l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 356 LFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 98764 2 234455444444444433
No 191
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.91 E-value=1.9e-09 Score=111.09 Aligned_cols=145 Identities=21% Similarity=0.230 Sum_probs=119.6
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCC-hhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQS-SSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
.+|.+....++....++....++|.|+.+++|.+ ..+.+.+.+...+...++.++.|++.||+ |+|+..........+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 285 (352)
T PF07690_consen 207 VLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLIL 285 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 4454556666666777888899999999999999 78999999999999999999999999998 988888777776666
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+.+.+.+... ..+....++..++.|++.+...+...+++.|.+|+++ |+++.++
T Consensus 286 ~~~~~~~~~~--------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~ 339 (352)
T PF07690_consen 286 GALGLLLLPF--------------------SSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGL 339 (352)
T ss_dssp HHHHHCCSHH--------------------HCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHH
T ss_pred HHHHHHHHHH--------------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHH
Confidence 6666554411 1234556667778899999999999999999999887 9999999
Q ss_pred hhHHHhHHHHHHh
Q 008623 190 FYFSINIGALIAS 202 (559)
Q Consensus 190 ~~~~~~iG~~igp 202 (559)
.+...++|+.+||
T Consensus 340 ~~~~~~~~~~igP 352 (352)
T PF07690_consen 340 FNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCC
Confidence 9999999999987
No 192
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.90 E-value=3.2e-08 Score=104.90 Aligned_cols=165 Identities=7% Similarity=-0.022 Sum_probs=118.6
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.++..+...++.....++...+++.++.+++|++..+.+.+.....++..++.++.|++.||. +|+..+....+...++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~~ 295 (394)
T PRK10213 217 GVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVSA 295 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHH
Confidence 355555555666666666667764444567899999999999999999999999999999996 6554444333323332
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
..+.... .+.+.+.+..++.|++.+...+...+++.+..|++ +++..++.
T Consensus 296 ~~l~~~~-----------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 345 (394)
T PRK10213 296 LVLTLWG-----------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQ-------AEKAGSIQ 345 (394)
T ss_pred HHHHHHh-----------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCccc-------HHHHHHHH
Confidence 2322222 23555666778889999988888888888888744 45666677
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMA 226 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~ 226 (559)
....++|..+||.++|++.+..|++..+...++..+
T Consensus 346 ~~~~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~ 381 (394)
T PRK10213 346 VAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLML 381 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccChhhHHHHHHHHHH
Confidence 778889999999999999999998888877665443
No 193
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.89 E-value=3.6e-08 Score=103.60 Aligned_cols=167 Identities=11% Similarity=-0.053 Sum_probs=113.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchh---HHHHH-HHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRY---WTIAI-FSI 105 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~~~~~-~~~ 105 (559)
|.+|.+....++....+|++..|+|.|+++ .|++.. .+.......+...++ .++++||. .|| +.... ..+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~-~r~~~r~~~~~~~~~ 265 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRV-ARAGLRSIYIRAAAL 265 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHh-hhhhhHHHHHHHHHH
Confidence 557888899999999999999999999964 678764 555555555544444 57788886 543 33332 333
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
+.++........ .+.....+...+.+++.....+...++.+|.+|++. |++
T Consensus 266 ~~a~~~~~~~~~-----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt 316 (368)
T TIGR00903 266 LIAAFFLALAFE-----------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGK 316 (368)
T ss_pred HHHHHHHHHHHc-----------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCc
Confidence 333322222222 112223334445566666666777889999999987 999
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHH
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFF 233 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~ 233 (559)
+.++.+...++|+..+|.+.+.+.. |.+..|.+.++..+++.+..+
T Consensus 317 ~~G~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 317 AAGAIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999887773 666677766666666555543
No 194
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.88 E-value=4.4e-08 Score=99.22 Aligned_cols=169 Identities=16% Similarity=0.102 Sum_probs=137.9
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.-|.+....-..+..+|.++.|+|.++. +.|+|..++|+.++...+......+..-++++|...+|+..+.....+.++
T Consensus 209 ~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G 287 (395)
T COG2807 209 LAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVG 287 (395)
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 3578888888899999999999999986 689999999999999999999999999999998767888888888888888
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.+.+.+. |. .+++ ...+++|+|.|+.+|....++.+..++.+ +.++..++.
T Consensus 288 ~~G~~~~---P~------------------~~~~---lw~~llG~G~G~~F~laL~li~~rs~~a~-----~Aa~LSgma 338 (395)
T COG2807 288 LVGLLLA---PG------------------QLPI---LWALLLGLGQGGAFPLALTLILLRSSDAA-----IAAALSGMA 338 (395)
T ss_pred HHHHHHh---hh------------------hHHH---HHHHHHhCccchHHHHHHHHHHhhcCChH-----HHHHHHHHh
Confidence 8888766 22 1221 22478999999999999999999887765 357777788
Q ss_pred hHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAV 229 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~ 229 (559)
+-...+=+..||.+.|++.|..| |+.++...+...++..
T Consensus 339 Qg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~ 378 (395)
T COG2807 339 QGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLML 378 (395)
T ss_pred hhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHH
Confidence 88888888999999999999876 8877665554443333
No 195
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.88 E-value=1.7e-08 Score=104.12 Aligned_cols=175 Identities=16% Similarity=0.154 Sum_probs=142.9
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+...++..++.+=+.-++......|..+++|++..+...+....++.+.++++++|+|.||+ |.|++++.+.++..+
T Consensus 252 ~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~~ 330 (438)
T COG2270 252 KNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILSI 330 (438)
T ss_pred cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHHH
Confidence 3556666777777777778888899999999999999999999999999999999999999998 999999999988776
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
..+...+. .....+++.-.+.|+..|......=++.++..|+++ -++.+|+
T Consensus 331 ~~~~~~~~-----------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFgl 381 (438)
T COG2270 331 AALYLIFL-----------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGL 381 (438)
T ss_pred HHHHHHHc-----------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeeh
Confidence 65555443 123335555568899999999999999999999997 7999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHh
Q 008623 190 FYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~ 234 (559)
|+........+||.+.+.+.+..| -|..+....++.+++++.++.
T Consensus 382 yaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~ 427 (438)
T COG2270 382 YALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLR 427 (438)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEe
Confidence 999999999999999998887766 566665555555566555443
No 196
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.88 E-value=3.3e-08 Score=109.28 Aligned_cols=204 Identities=16% Similarity=0.196 Sum_probs=147.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
+.+..++....+.+....++.....+-+++.++++.++.|++.+.+-++..+...+..+.+-|. -|-|.+-.|.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4445555555555555557777777788889999999999999999999999999999999997 777778888999999
Q ss_pred HHHHHhhhhccCCCCC----C---CCCCC-----------CCcccc----------cCcc-hhHHHHHHHHHHHHhccCC
Q 008623 110 GMTFLTVTASVSGLKP----V---CHGPR-----------GEETCQ----------VTDA-QSATFFVALYLIALGTGGI 160 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~----~---~~~~~-----------~~~~~~----------~~~~-~~~~~~~~~~l~g~g~g~~ 160 (559)
+.+++++-+.+..--+ . +.... ....|. ..+. ....++++.++.|+|...+
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 9888865322111000 0 00000 000000 1111 2336788999999999999
Q ss_pred CcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcc------------------ccC-chhhhHHH
Q 008623 161 KPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQD------------------NEG-WGWGFGIP 221 (559)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~------------------~~g-~~~~f~i~ 221 (559)
.+...+|+=|-..+++ -...+|+.+.+..+|.++|.++++.+.. +.| |+..|++.
T Consensus 255 ~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC 328 (735)
T ss_pred ccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence 9999999988887775 7888999999999999999998887632 123 77788888
Q ss_pred HHHHHHHHHHHHhcccccc
Q 008623 222 AVAMAIAVVSFFSGTRLFR 240 (559)
Q Consensus 222 ~~~~~i~~~~~~~~~~~~~ 240 (559)
+.+.++..+-+++..+.+.
T Consensus 329 g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHhCcccCc
Confidence 8888877777777666543
No 197
>PRK09848 glucuronide transporter; Provisional
Probab=98.87 E-value=8.4e-09 Score=111.18 Aligned_cols=163 Identities=14% Similarity=0.150 Sum_probs=124.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++...+..++...+++......+.|+++.+|.+....+.......+...++.++.++++||+ |+|+++.++.++.++
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~i 306 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGTC 306 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4466666777777777777777788888888888766555555555667788899999999998 999999999988777
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhh-ccccchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKK-HKSSFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~ 188 (559)
+.+.+.+. +. .+.+.+++..++.++|.+...+...++.+|..|.++..+.+ +++..++
T Consensus 307 ~~~~~~~~---~~------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 307 GYLLFFWV---SV------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHHHHc---Cc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 77666543 11 34555666777889999999999999999998865422211 2477888
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCc
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGW 214 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~ 214 (559)
.+++...+|..+|+.+.+.+.+..||
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999887665555
No 198
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.86 E-value=2.2e-08 Score=120.48 Aligned_cols=164 Identities=11% Similarity=0.029 Sum_probs=129.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChh-hhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSS-TASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYV 108 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~-~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~ 108 (559)
|.++..++..++.....+.+..++|.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++++.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3445555555555566666778899999999999998 999999999999999999999999998 99998888887777
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++.+++.+. .+.+.+++..++.|++.++..+...+++.+..|++. |+++++
T Consensus 311 ~~~~~~~~~-----------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~ 361 (1146)
T PRK08633 311 LSLFLLPTA-----------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLA 361 (1146)
T ss_pred HHHHHHHHh-----------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhH
Confidence 776666544 245566677788899999888888999999999887 999999
Q ss_pred hhhHHHhHHHHHHhhhhhhhcc-ccCchhhhHHHHH
Q 008623 189 WFYFSINIGALIASSVLVWIQD-NEGWGWGFGIPAV 223 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~-~~g~~~~f~i~~~ 223 (559)
+.++..++|..+++.+++.+.. ..++...|.+.+.
T Consensus 362 ~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 362 ANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 9999999999888877765543 2344445554443
No 199
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.86 E-value=4.6e-08 Score=98.73 Aligned_cols=175 Identities=15% Similarity=0.141 Sum_probs=118.7
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhc--C-----------------CChhhhHHHHHHHHHHHHHhhhHHHHHhH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQL--D-----------------QSSSTASKNVLDWSGTCYITPLIGAFLAD 91 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g-----------------~s~~~~~~~~~~~~~~~~~~~~~~G~laD 91 (559)
..+++....|.+...||++.-......+... | .+...--.-.....+.-+.+.++.|++.|
T Consensus 327 ttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~ive 406 (528)
T KOG0253|consen 327 TTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVE 406 (528)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHH
Confidence 4456777788899999988654433333211 1 11112222234556778889999999999
Q ss_pred hccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccC
Q 008623 92 AYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQ 171 (559)
Q Consensus 92 r~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 171 (559)
|+ |||+++....+++.+..+++..+ +..+....+++.+|+++. +.+.+++.|..|.
T Consensus 407 rl-GRKkTMal~l~~f~iflfll~~c-------------------~~rn~~tvllf~arafis----g~fqvaYvYtPEV 462 (528)
T KOG0253|consen 407 RL-GRKKTMALSLILFGIFLFLLTTC-------------------KTRNAYTVLLFTARAFIS----GAFQVAYVYTPEV 462 (528)
T ss_pred Hh-cchhHHHHHHHHHHHHHHHHHHh-------------------cCcchhHHHHHHHHHHHh----chheEEEEecCcc
Confidence 97 99999999999888777766543 122233456667777664 4556789999999
Q ss_pred CCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 172 FDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 172 ~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
+|... |+.+.|....+..||+++.|+++ +...-.-..+..+...+.+++.+...+.+-
T Consensus 463 yPTav------RatgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 463 YPTAV------RATGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred cchhh------hhcchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeee
Confidence 99998 99999999999999999999988 333233333444455555555555555443
No 200
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.86 E-value=5.3e-08 Score=103.24 Aligned_cols=160 Identities=9% Similarity=-0.093 Sum_probs=118.0
Q ss_pred HHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhcc
Q 008623 41 CERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASV 120 (559)
Q Consensus 41 ~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~ 120 (559)
+...........++.|+++.+|.++.+.|.+.+...++..++.++.+++.||. ++++++..+.++ .+....+.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~~-~~~~~~~~~~--- 290 (393)
T PRK11195 216 LFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGILM-GLVVLLMALQ--- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHHH-HHHHHHHHHH---
Confidence 33444455556677888889999999999999999999999999999999998 999888777533 3333223222
Q ss_pred CCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHH
Q 008623 121 SGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALI 200 (559)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~i 200 (559)
.+.+...+..++.|++.+...+...+.+.+..|++. +++++.+..+...++|..+
T Consensus 291 --------------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-----~~g~~~a~~~~~~~~~~~~ 345 (393)
T PRK11195 291 --------------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-----GAGHSIAVQNFNENLAMLL 345 (393)
T ss_pred --------------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-----cchhHHHHHhHHHHHHHHH
Confidence 234555666778899888888888888877655432 2688999999999999999
Q ss_pred HhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 201 ASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 201 gp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
+..+.+.+ +..|-++.+.+.+...++....
T Consensus 346 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK11195 346 MLGLYSLL-VKLGVPVVAVIVGFGLLVALAM 375 (393)
T ss_pred HHHHHHHH-HHcCCCHHHHHHHHHHHHHHHH
Confidence 99888855 5678777766655544444443
No 201
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.84 E-value=1.5e-07 Score=100.98 Aligned_cols=161 Identities=15% Similarity=0.119 Sum_probs=113.8
Q ss_pred HHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc--cc--hhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC
Q 008623 53 LVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY--LG--RYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCH 128 (559)
Q Consensus 53 l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~--~G--rr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (559)
...|+++++|+++++...+.+...+-- ...|+.|.++|-+ +| ||+=++++.++..++.+.++.. |..
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~~----- 82 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PAS----- 82 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---ccc-----
Confidence 445788999999999887666655444 4488999999986 34 4445555666555555544443 220
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhh
Q 008623 129 GPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWI 208 (559)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l 208 (559)
..+.....+..++..+|.+......-+++.|...++.. .|+...++.+....+|++++..+.|.+
T Consensus 83 -----------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~----~~g~lqS~~~~~~~~G~lv~~~l~G~l 147 (433)
T PF03092_consen 83 -----------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPE----SRGDLQSFVWGVRSVGSLVGSLLSGPL 147 (433)
T ss_pred -----------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCc----hhHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 12333445556677888888888889999999866541 267788888889999999999999999
Q ss_pred ccccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 209 QDNEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 209 ~~~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
.+..+++..|.+.+++.++.++..++..+
T Consensus 148 ~~~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 148 LDSFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred hhcCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 99999999998887666655544444443
No 202
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.80 E-value=4e-08 Score=118.24 Aligned_cols=182 Identities=10% Similarity=-0.034 Sum_probs=132.3
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++..++..++..+.++++..++|.|+++.+|.+..+.+++.+.+.++..++.++.|+++|++ ++++.+..+.++..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~~ 303 (1140)
T PRK06814 225 KRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMGL 303 (1140)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHHH
Confidence 4577777777777788888889999999999999999999999999999999999999999987 776666655554444
Q ss_pred HHHHHhhhhc--cCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 110 GMTFLTVTAS--VSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 110 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
+.+.+.+... .+.....+.. -......+.+.+.+..+++|++.+...+...+++.+.+|++. |++++
T Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~ 372 (1140)
T PRK06814 304 FGLDLAFASSSVPAEPAQLKSI-----LVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVI 372 (1140)
T ss_pred HHHHHHhcccccccccccccch-----hhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeee
Confidence 4433332100 0000000000 000000234566777888899999999999999999999997 99999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhcc-ccCchhhhHHHHH
Q 008623 188 NWFYFSINIGALIASSVLVWIQD-NEGWGWGFGIPAV 223 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~-~~g~~~~f~i~~~ 223 (559)
+..+...++|..+++++.+.+.+ ..++...+.+.++
T Consensus 373 g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 373 AANNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 99999999999999999988863 3456655554443
No 203
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.78 E-value=1.1e-06 Score=89.77 Aligned_cols=153 Identities=18% Similarity=0.123 Sum_probs=105.6
Q ss_pred hhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccccc
Q 008623 59 HQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQV 138 (559)
Q Consensus 59 ~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (559)
++.|++..+.+.+.........+..++.|.++||+ |||+..+..+++..++.+..- .
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~--------------------- 118 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-S--------------------- 118 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-c---------------------
Confidence 67999999999999999999999999999999999 999999999988777654321 1
Q ss_pred CcchhHHHHHHHHHHHHhccCCCcccccc-cccCCCCcchHhhhccccchhhhh-HHHhHHHHHHhhhhhhhccccCc--
Q 008623 139 TDAQSATFFVALYLIALGTGGIKPCVSSY-GADQFDDADEAEKKHKSSFFNWFY-FSINIGALIASSVLVWIQDNEGW-- 214 (559)
Q Consensus 139 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~-~~~~iG~~igp~i~~~l~~~~g~-- 214 (559)
.+...++++|++.|++.....++..+. +.|+-..+.+. +..+.-++... ....+-++.+.+++-++.+..+.
T Consensus 119 --~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~--~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~ 194 (354)
T PF05631_consen 119 --SNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQ--EWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGP 194 (354)
T ss_pred --cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh--HHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCC
Confidence 457889999999999999888877664 34443222210 01222222211 11223334444455556665554
Q ss_pred hhhhHHHHHHHHHHHHHHHhcccc
Q 008623 215 GWGFGIPAVAMAIAVVSFFSGTRL 238 (559)
Q Consensus 215 ~~~f~i~~~~~~i~~~~~~~~~~~ 238 (559)
..+|..+..+.+++.+.+...+++
T Consensus 195 vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 195 VAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred cchHHHHHHHHHHHHHHHHhcccc
Confidence 678888887777777766655554
No 204
>PRK11043 putative transporter; Provisional
Probab=98.77 E-value=2.1e-07 Score=98.54 Aligned_cols=158 Identities=9% Similarity=0.009 Sum_probs=110.9
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
.+...+...+....++.+..+.|.|++ +.|++..+.+.......++..++..+.+++.||+ |+|+......+...++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~ 282 (401)
T PRK11043 205 YLGNVLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSV 282 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 333333444444556666677888875 5799999999888888888889999999999998 99997766655544444
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+.+......+. .+.+...+...+.+++.+...|...+...|..|+ + ++++.++++
T Consensus 283 ~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~g~~~ 337 (401)
T PRK11043 283 IAIWLASLLSH------------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQ-A------TGKAAALQN 337 (401)
T ss_pred HHHHHHHHhcc------------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcc-c------ChHHHHHHH
Confidence 33322211011 2234445556677888888888887777777765 3 899999999
Q ss_pred HHHhHHHHHHhhhhhhhccccCchh
Q 008623 192 FSINIGALIASSVLVWIQDNEGWGW 216 (559)
Q Consensus 192 ~~~~iG~~igp~i~~~l~~~~g~~~ 216 (559)
.....++.+++.+.+.+.+......
T Consensus 338 ~~~~~~~~~~~~~~g~l~~~~~~~~ 362 (401)
T PRK11043 338 TLQLGLCFLASLLVSALISTPLLTT 362 (401)
T ss_pred HHHHHHHHHHHHHHHHccCCChhHH
Confidence 8888888888888888877544433
No 205
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.74 E-value=1.8e-07 Score=98.86 Aligned_cols=145 Identities=10% Similarity=0.034 Sum_probs=92.2
Q ss_pred HHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCC
Q 008623 44 LAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGL 123 (559)
Q Consensus 44 ~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (559)
.....+..+.|.|+++++|+++.+.+.+.....+...++.++.|++.||+ |||+.++.+.++..++.+.+.+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~~----- 290 (392)
T PRK10473 217 TVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALSP----- 290 (392)
T ss_pred HHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 33344455667788889999999999999999999999999999999998 999999999888777777666541
Q ss_pred CCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhh
Q 008623 124 KPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASS 203 (559)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~ 203 (559)
+.........+.+.|.+...+. ....+..|.++ |+ +..+....++..+++.
T Consensus 291 ------------------~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~------~~---g~~~~~~~~~~~~g~~ 341 (392)
T PRK10473 291 ------------------SHAVSLFGITLICAGFSVGFGV--AMSQALGPFSL------RA---GVASSTLGIAQVCGSS 341 (392)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHhHH--HHHHHhccCcc------cc---cHHHHHHHHHHHHHHH
Confidence 1222222223333333322222 22233444433 33 2223344566666777
Q ss_pred hhhhhccccCchhhhHHHHH
Q 008623 204 VLVWIQDNEGWGWGFGIPAV 223 (559)
Q Consensus 204 i~~~l~~~~g~~~~f~i~~~ 223 (559)
+++++.+..|+.....+.+.
T Consensus 342 ~~~~l~~~~g~~~~~~~~~~ 361 (392)
T PRK10473 342 LWIWLAAVLGISAWNMLIGI 361 (392)
T ss_pred HHHHHHHHhccchhHHHHHH
Confidence 77777777776654444443
No 206
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.74 E-value=1.4e-07 Score=98.87 Aligned_cols=148 Identities=11% Similarity=-0.038 Sum_probs=99.3
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
.+..++..++...+.+.+..+.|.++.+++|+++.+.+.+.....+...++.++.|++.||+ |||+++..+..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 45555555566666667777788888888999999999999999999999999999999998 99999988877644433
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
+.+..... . ..+.+...+...+.+.+.+...+.....+.|..|+ + +++..+..+
T Consensus 275 ~~~~~~~~-~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~ 328 (377)
T PRK11102 275 IWLVVSAL-L------------------DLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPH-M------AGTASSLAG 328 (377)
T ss_pred HHHHHHHH-H------------------hhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccc-c------chHHHHHHH
Confidence 33322210 0 01233333344444444445455555666777663 3 788888755
Q ss_pred HH-HhHHHHHHhhhhh
Q 008623 192 FS-INIGALIASSVLV 206 (559)
Q Consensus 192 ~~-~~iG~~igp~i~~ 206 (559)
.. ..+|+.+++++++
T Consensus 329 ~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 329 TLRFGIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 53 3567777776544
No 207
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=4.8e-08 Score=106.39 Aligned_cols=176 Identities=17% Similarity=0.140 Sum_probs=146.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccc--hhHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLG--RYWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~ 107 (559)
+.++.+.+...+..++++....++|.|.. .+|++..+++.+++...+...++.++.|+++|+. . ++.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 56777888888888999988899999987 8999999999999999999999999999999998 6 334444555555
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccch
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFF 187 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 187 (559)
.++.+.+++. .+.+.+...-.+.|++.|.+.......+.|..+.++ -..++
T Consensus 376 gl~~~~~p~~-----------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~ 426 (509)
T KOG2504|consen 376 GLARLFLPFA-----------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAY 426 (509)
T ss_pred HHHHHHHHHh-----------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHH
Confidence 5555555544 346677777788899999888877788899999886 89999
Q ss_pred hhhhHHHhHHHHHHhhhhhhhccccC-chhhhHHHHHHHHHHHHHHHhcc
Q 008623 188 NWFYFSINIGALIASSVLVWIQDNEG-WGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 188 ~~~~~~~~iG~~igp~i~~~l~~~~g-~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
|+......++..+||.++|++.|..| |...|+..++..+++....++..
T Consensus 427 Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 427 GLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999999999999999999888 99999999888877776554443
No 208
>TIGR00898 2A0119 cation transport protein.
Probab=98.73 E-value=4e-08 Score=107.45 Aligned_cols=132 Identities=13% Similarity=0.024 Sum_probs=95.6
Q ss_pred HHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHH
Q 008623 73 LDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYL 152 (559)
Q Consensus 73 ~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 152 (559)
....+...++.++.+++.||+ |||+.+..+.++..++.+.+.+. +. ...+...+..++
T Consensus 362 ~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~---~~------------------~~~~~~~~~~~~ 419 (505)
T TIGR00898 362 FISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV---PV------------------DLYFLRTALAVL 419 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc---CC------------------CchHHHHHHHHH
Confidence 344566778888999999998 99999999988777776666544 11 112333344445
Q ss_pred HHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHH
Q 008623 153 IALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 153 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~ 232 (559)
.+++.+...+....+.+|.+|++. |++++++.+....+|++++|.+.+ +. ..++..++.+.+...+++.+..
T Consensus 420 ~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 420 GKFGITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILT 491 (505)
T ss_pred HHHHHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHH
Confidence 556666666778889999999987 999999999999999999999988 43 3556666666665555554444
Q ss_pred Hh
Q 008623 233 FS 234 (559)
Q Consensus 233 ~~ 234 (559)
++
T Consensus 492 ~~ 493 (505)
T TIGR00898 492 LF 493 (505)
T ss_pred Hc
Confidence 33
No 209
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.72 E-value=6.4e-08 Score=105.21 Aligned_cols=165 Identities=15% Similarity=0.067 Sum_probs=117.7
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++.++...++.....+......+.|++..++ +....+.+.+...+...++.++.++++||+ |||++++.+.++.++
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~~ 308 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPVL 308 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHHH
Confidence 556666677777777777766666655554444 455666677777788889999999999998 999999988877666
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc-cccchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH-KSSFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~ 188 (559)
+.+........+ ..+.+.+++..++.+++.+...+...++++|..|.++-.+.+| .+..++
T Consensus 309 ~~~~~~~~~~~~------------------~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 309 SCGVLLLMGLAA------------------PHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHhccC------------------chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 655543321111 1345556666677888899888889999999988653221111 244678
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCc
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGW 214 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~ 214 (559)
...+...+|..+++.+.|++.+..||
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88888999999999999988776666
No 210
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.71 E-value=7.3e-08 Score=100.32 Aligned_cols=141 Identities=13% Similarity=0.076 Sum_probs=105.8
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.++.+.+..++.....+.+..+++.|+++.+|+++.+++.+.....+...++.+++|+++||+ |||+.+..+......+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~ 304 (366)
T TIGR00886 226 HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAMG 304 (366)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHHH
Confidence 456666666666667778888999999999999999999999999999999999999999998 9998888777666665
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
...+.+.. . ...+.+...+...+.+++.|...+...++.++..|+ + +++..|+.
T Consensus 305 ~~~~~~~~--~-----------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~------~g~~~g~~ 358 (366)
T TIGR00886 305 AFLVVLGL--V-----------------SPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR-A------TGAVSGLV 358 (366)
T ss_pred HHHHHhcC--C-----------------CcchHHHHHHHHHHHHHHhccccchhhhcchhhchh-h------cccHHHHH
Confidence 55544331 0 001344444555556666666667777888888874 3 89999998
Q ss_pred hHHHhHHH
Q 008623 191 YFSINIGA 198 (559)
Q Consensus 191 ~~~~~iG~ 198 (559)
+...++|+
T Consensus 359 ~~~~~~g~ 366 (366)
T TIGR00886 359 GAIGNLGG 366 (366)
T ss_pred HHhccCCC
Confidence 88877763
No 211
>PRK09669 putative symporter YagG; Provisional
Probab=98.69 E-value=4.9e-08 Score=105.17 Aligned_cols=162 Identities=14% Similarity=0.103 Sum_probs=108.5
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.++.++...++...+........+.|.+..++. ....+.+.....+...++.+++++++||+ |||+.+..+.+..++.
T Consensus 230 ~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~~ 307 (444)
T PRK09669 230 QWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVIL 307 (444)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHH
Confidence 345555555554444443334333344433433 33344455566677788889999999998 9999999887665544
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc-cccchhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH-KSSFFNW 189 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~ 189 (559)
.....+. +. ++.+.+++..++.|++.+...+...++++|..+.++..+.++ .+..++.
T Consensus 308 ~~~~~~~---~~------------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~ 366 (444)
T PRK09669 308 SALIFFI---PP------------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFST 366 (444)
T ss_pred HHHHHHh---Cc------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHH
Confidence 3333222 11 345666777788999999999999999999998554322222 2456678
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCch
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWG 215 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~ 215 (559)
++++..+|..+|+.++|++.+..||.
T Consensus 367 ~~~~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 367 NLFAIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88899999999999999988777763
No 212
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.69 E-value=9e-08 Score=99.62 Aligned_cols=144 Identities=10% Similarity=0.018 Sum_probs=109.5
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHH-HHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWS-GTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~-~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
++.+.+..++....++....++|.|+++ +|++..+.+.+.+... +...++.+++|++.||+ |||+.++.+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5666666777788888889999999987 9999999998887765 56788999999999998 9999998888877666
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
.....+..+... ..+....+.+.+....++.+++.+...+...++..|.+|+++ |++.++++
T Consensus 289 ~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 350 (356)
T TIGR00901 289 NAGFVWLASNGH------------HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALL 350 (356)
T ss_pred HHHHHHHHhcCc------------ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHH
Confidence 554443311000 000000234556667778899999999999999999999997 99999988
Q ss_pred hHHHh
Q 008623 191 YFSIN 195 (559)
Q Consensus 191 ~~~~~ 195 (559)
+...+
T Consensus 351 ~~~~~ 355 (356)
T TIGR00901 351 SSLSA 355 (356)
T ss_pred HHHHh
Confidence 77654
No 213
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.68 E-value=1.6e-07 Score=100.21 Aligned_cols=163 Identities=12% Similarity=0.027 Sum_probs=116.1
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhc-CCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQL-DQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-g~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
.++..++..++......+...+++.|.++.. +.+....+...+.+.....++.+++|++.||+ ++||++.+..++.++
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 3455566666666666677788999986532 55555556667777788899999999999998 999998888777666
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
..++..+. .+.. ......+.|++.+.++|...++..+..+++. ..+.+.
T Consensus 312 ~~ll~~~~-----------------------~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~-------~~~s~~ 360 (410)
T TIGR00885 312 LCLGSIFA-----------------------GGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT-------KYGAAG 360 (410)
T ss_pred HHHHHHHc-----------------------CChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHH
Confidence 65555543 1112 2455667788888888999999999998763 233333
Q ss_pred hhHHHhHHHHHHhhhhhhhcccc------CchhhhHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNE------GWGWGFGIPAVAMA 226 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~------g~~~~f~i~~~~~~ 226 (559)
..++ .+|+.+.|.+.|++.|.. +.+..|+++.++.+
T Consensus 361 l~~~-~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 361 LVMA-IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHH-HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 3333 399999999999999954 47788887665443
No 214
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.67 E-value=3.5e-07 Score=97.01 Aligned_cols=179 Identities=14% Similarity=0.038 Sum_probs=129.9
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
+...++..++...+.-....+.+.|+++.-|.+....+.+.+...+.=.+.-.+.+++..|+ |.|++++++.+..++=.
T Consensus 209 ~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~vR~ 287 (400)
T PF03825_consen 209 FLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAVRW 287 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHH
Confidence 44555566666666666778889999765557777778777777777778888999999998 99999999998877776
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFY 191 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 191 (559)
.+.+.... |. ........+...+.|+..+....+...++.+..|++. |+++.++++
T Consensus 288 ~l~a~~~~-~~-----------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~ 343 (400)
T PF03825_consen 288 LLYAYFSD-PW-----------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYS 343 (400)
T ss_pred HHHHHhcC-Cc-----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHH
Confidence 66655410 00 0001122333457899999999999999999999997 999999977
Q ss_pred HH-HhHHHHHHhhhhhhhccccCch------hhhHHHHHHHHHHHHHHHhc
Q 008623 192 FS-INIGALIASSVLVWIQDNEGWG------WGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 192 ~~-~~iG~~igp~i~~~l~~~~g~~------~~f~i~~~~~~i~~~~~~~~ 235 (559)
.. ..+|..+|..++|++.|.+|-+ ..+.+.+.+.++..+.+++.
T Consensus 344 ~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 344 ALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 64 5799999999999999987744 33444544444444444443
No 215
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=2.9e-07 Score=98.60 Aligned_cols=188 Identities=13% Similarity=0.087 Sum_probs=124.3
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.+++.+...++.++...-........+-++-|++..++.++.........+..+++.++.||+ |||+.++.+..+..+.
T Consensus 270 ~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 270 PLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHHH
Confidence 345555666665555444444445555567899999999999999999999999999999998 9999999999887777
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchh-HHHHHHHHHHHHh-ccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQS-ATFFVALYLIALG-TGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~g~g-~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
.+++.....+.. ...... +..+++.++..++ .-+..|..+-+.+|.+|++. |..+++
T Consensus 349 ~~~~~~~~~l~~---------------~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s 407 (485)
T KOG0569|consen 349 LLLMSIALFLSN---------------SFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQS 407 (485)
T ss_pred HHHHHHHHHHHH---------------HhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHH
Confidence 766655422111 000011 1122333332222 22345778888999999998 999988
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccccc
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLFRN 241 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~~ 241 (559)
+......+...+-......+.+..|- ..|.+..+..++..+..++..|+.|.
T Consensus 408 ~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 408 VATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 87666666666555555566666663 45665556555666666665665443
No 216
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.62 E-value=1.4e-07 Score=99.19 Aligned_cols=176 Identities=14% Similarity=0.072 Sum_probs=139.2
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcC---CChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLD---QSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
|.+|.+.+........|+.+..-.+.|.+..++ .+....|.+.+...+.-.+...+..++.+|+ |.|+.++++..+
T Consensus 220 ~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~i 298 (412)
T PF01306_consen 220 RNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHHH
Confidence 467877777777777777777778889876543 3345577788888888888899999999998 999999999988
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
+++=...++++ ++++.+.+.+.+.++-.+....++.-|+++.+|++- .++.
T Consensus 299 ~~iRi~~~~~~-----------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~ 349 (412)
T PF01306_consen 299 MAIRIIGSGFA-----------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATL 349 (412)
T ss_dssp HHHHHHHHHT-------------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHH
T ss_pred HHHHHHHHhhh-----------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHH
Confidence 88887888776 468889999999999999988999999999999886 6677
Q ss_pred hhh-hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 187 FNW-FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 187 ~~~-~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
..+ ++.+.++|..+.+.++|++.|..|++..|++.+.+.+...+...+.
T Consensus 350 y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~ 399 (412)
T PF01306_consen 350 YLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFT 399 (412)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheee
Confidence 777 5788899999999999999999999988877765554444433333
No 217
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.56 E-value=5.4e-07 Score=95.72 Aligned_cols=164 Identities=18% Similarity=0.189 Sum_probs=131.3
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+...+...++...++....+.+..|.+..+|.+................++.++..++.+|+ |||+++..+.++.++
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~~i 314 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLLAV 314 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHHHH
Confidence 3455555667777777777777788888888888888888888888888888899999999998 999999999999999
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccc-cchh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKS-SFFN 188 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~ 188 (559)
+...+.+.. . ++.+.+++..++.++|.+...+..+++++|..+-+|-.+.+||. ..++
T Consensus 315 ~~~~~~f~~---~------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s 373 (467)
T COG2211 315 GYLLLYFTP---A------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYS 373 (467)
T ss_pred HHHHHHhhc---C------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHH
Confidence 999888762 1 56778888889999999999999999999999876654444443 3456
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccCch
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEGWG 215 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g~~ 215 (559)
.+.+..-+|..++..+.|++....||.
T Consensus 374 ~~tF~~K~g~ala~~~~g~~L~~~Gyv 400 (467)
T COG2211 374 GMTFFRKLGLALAGFIPGWILGAIGYV 400 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 677777888888888888876666543
No 218
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.51 E-value=2.5e-06 Score=90.06 Aligned_cols=148 Identities=12% Similarity=0.008 Sum_probs=101.5
Q ss_pred HHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhc
Q 008623 40 CCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTAS 119 (559)
Q Consensus 40 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~ 119 (559)
++.......+....+.|+++.+|.+..+.+.......++..++.++.+++.||+ ||+.... .....++.+.......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~~--~~~~~~~~~~~~~~~~ 293 (394)
T PRK11652 217 IGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQS--VICCLLAGLLMWIPGW 293 (394)
T ss_pred HHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--HHHHHHHHHHHHHHHH
Confidence 333333444455667788888999999999988888888888889999999998 7433332 2222222222111100
Q ss_pred cCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHH
Q 008623 120 VSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGAL 199 (559)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~ 199 (559)
. ...+.+.+.+..++.+++.+...|...++..|.+|++ ++...++.+...++|+.
T Consensus 294 -~-----------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-------~g~~~~~~~~~~~lg~~ 348 (394)
T PRK11652 294 -F-----------------GVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYL-------AGTAGALLGGLQNIGSG 348 (394)
T ss_pred -h-----------------ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-------chHHHHHHHHHHHHHHH
Confidence 0 0023455666778888999988899999888988753 78888999989999999
Q ss_pred HHhhhhhhhccccCch
Q 008623 200 IASSVLVWIQDNEGWG 215 (559)
Q Consensus 200 igp~i~~~l~~~~g~~ 215 (559)
+++.+++.+.+...+.
T Consensus 349 ~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 349 LAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHccCCchHH
Confidence 9999998876653333
No 219
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.43 E-value=3.3e-05 Score=82.27 Aligned_cols=103 Identities=12% Similarity=0.096 Sum_probs=81.8
Q ss_pred HHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHH
Q 008623 72 VLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALY 151 (559)
Q Consensus 72 ~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (559)
.++.+....+.+++++.+.|+. |.|+.+.++......-...... .|.+.++..-+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~------------------------~N~y~~yfssa 110 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF------------------------PNSYYLYFSSA 110 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh------------------------cchHHHHHHHH
Confidence 6677788888999999999998 9999999998876665554433 24666888899
Q ss_pred HHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhh
Q 008623 152 LIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVL 205 (559)
Q Consensus 152 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~ 205 (559)
+.|+|.+..+.....+++|..+++. +.+..++.....+.+.++|..+.
T Consensus 111 llG~Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l 158 (461)
T KOG3098|consen 111 LLGFGAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIIL 158 (461)
T ss_pred HhhhhHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhh
Confidence 9999999999999999999998886 77777776666666666664433
No 220
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.42 E-value=3.2e-07 Score=93.90 Aligned_cols=176 Identities=13% Similarity=0.036 Sum_probs=130.5
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccc--hhHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLG--RYWTIAIFSIIYVI 109 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~G--rr~~~~~~~~~~~~ 109 (559)
++...+.-...+.+.-..-+.++.++.+++.-+..+.|....-..+.+.++.++.|.++||+ + |-.....++++...
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~ 350 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGV 350 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHH
Confidence 45555555555666666778999999999986666999999999999999999999999999 9 53333334443333
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
......++ .+...+++.+...+++.+..............+.+++.+.+-.+..+++
T Consensus 351 ~~~~iP~~-----------------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaI 407 (464)
T KOG3764|consen 351 SSGPIPFA-----------------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAI 407 (464)
T ss_pred HhchhHhh-----------------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHH
Confidence 33333333 4466688888888888888888888888888877654333346788889
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
...+..+|..+||.++|.+.+..|+.|.-.+.++..++-..+
T Consensus 408 ad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapv 449 (464)
T KOG3764|consen 408 ADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPV 449 (464)
T ss_pred HHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998776666554444333
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.34 E-value=6e-06 Score=85.10 Aligned_cols=157 Identities=17% Similarity=0.106 Sum_probs=119.6
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.++...+..|+.-..--.+..++++|+.+..|++..+++..++.+..+.+++..++-++-.|+ -..|.+.+..+...+
T Consensus 236 ~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~il 314 (422)
T COG0738 236 KHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAIL 314 (422)
T ss_pred hHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHH
Confidence 3456666777776666666778999999988999999999999999999999999999998898 888888777655444
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
-.+...++ .+. .-+...++.|+..+..+|.+.+...+..|++. +..+.
T Consensus 315 l~~~~~l~-----------------------~g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~t--------s~~s~ 362 (422)
T COG0738 315 LLLAVALI-----------------------GGV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHT--------SVGSG 362 (422)
T ss_pred HHHHHHHh-----------------------cCh-HHHHHHHHHHHHhHHHHHHHHHHHHhccCccc--------cccce
Confidence 33344333 122 23445678899999999999999999999443 22222
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFG 219 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~ 219 (559)
.-.+.-+|+.+-|.+.|++.|..|-...+.
T Consensus 363 ~l~maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 363 LLVMAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eeeeheecchHHHHHHHHHHHhhhhHHHHH
Confidence 334556899999999999999999877766
No 222
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.32 E-value=2e-05 Score=77.68 Aligned_cols=166 Identities=13% Similarity=0.158 Sum_probs=114.3
Q ss_pred HHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCC
Q 008623 45 AYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLK 124 (559)
Q Consensus 45 ~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (559)
..|.+ +.....+++.+|+|.+|...+-..-.++..+ .++.|.+.|++ |++.++.+|.+...+|+..++++.. .
T Consensus 17 t~Y~F-s~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~--~-- 89 (250)
T PF06813_consen 17 TTYTF-SAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVS--G-- 89 (250)
T ss_pred cccch-hhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHh--C--
Confidence 34444 3455677899999999999999999999887 58889999999 9999999999999999988887621 1
Q ss_pred CCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhh
Q 008623 125 PVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSV 204 (559)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i 204 (559)
. ....+.|.+.+..++.+.+.+.+.........+.||++ ||++.++.-....+++.+=..+
T Consensus 90 ----~--------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~-------RG~vvgilk~~~GLSaai~t~i 150 (250)
T PF06813_consen 90 ----R--------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRS-------RGTVVGILKGFFGLSAAIFTQI 150 (250)
T ss_pred ----c--------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccc-------cCceehhhhHHHHhHHHHHHHH
Confidence 0 11234566666666777776666566556666899865 9999999887777777665555
Q ss_pred hhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 205 LVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 205 ~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
...+.+.-.-...+.++....+++++..++.+
T Consensus 151 ~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 151 YSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred HHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 44444432223333334444445554444443
No 223
>PRK11462 putative transporter; Provisional
Probab=98.29 E-value=6.5e-06 Score=89.21 Aligned_cols=160 Identities=13% Similarity=0.099 Sum_probs=98.4
Q ss_pred hhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHH
Q 008623 32 CPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGM 111 (559)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~ 111 (559)
++.++...++..+...........|.+..+|. ....+.+...+.+...++.+++++++||+ |||+++..+.++..+..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~~~~ 307 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLAVIS 307 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHH
Confidence 44444444555555444444444444444553 33445667778888889999999999998 99998776555443333
Q ss_pred HHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcc-ccchhhh
Q 008623 112 TFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHK-SSFFNWF 190 (559)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r-~~~~~~~ 190 (559)
+...+. |. .+...+++..++.|++.+...+...++.+|..+.++-.+.+|| +..++..
T Consensus 308 ~~~~~~---~~------------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~ 366 (460)
T PRK11462 308 LAMFFV---PM------------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGT 366 (460)
T ss_pred HHHHHh---ch------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHH
Confidence 333222 11 2233334445566777777777778888888775432222233 2335666
Q ss_pred hHHHhHHHHHHhhhhhhhccccCc
Q 008623 191 YFSINIGALIASSVLVWIQDNEGW 214 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~ 214 (559)
.++..+|..+|+.++|++.+..||
T Consensus 367 ~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 367 LFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 778889999999888887665555
No 224
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.29 E-value=1.2e-05 Score=85.84 Aligned_cols=168 Identities=14% Similarity=0.041 Sum_probs=109.1
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|.+|...+..++....++.+...+|.|+++.+|.++.+.++.......+..++..+.+.+.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4467666777777777787778889999999999999999988878888888888887766554 444444333333333
Q ss_pred HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 110 GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
+...+....... ..+.+..+++.++.++|.+...|...+..- .+.+. .++++.++
T Consensus 297 g~~l~~~~~~~~------------------~~~~~~~~~~~~l~~~G~~~~~p~~~~~al--~~~~~-----~~G~a~a~ 351 (413)
T PRK15403 297 GLALLIVGNLLW------------------PHVWLWSVLGTSLYAFGIGLIFPTLFRFTL--FSNNL-----PKGTVSAS 351 (413)
T ss_pred HHHHHHHHHHHc------------------cccHHHHHHHHHHHHHHHHHHhHHHHHHHh--ccCCC-----CCcHHHHH
Confidence 333332221000 012333456777788888888777775332 22222 16778888
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHH
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVA 224 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~ 224 (559)
++.....+...++...+++.+. +-.++|....++
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 385 (413)
T PRK15403 352 LNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVV 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHH
Confidence 8888888888888888888665 445566555443
No 225
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.26 E-value=5.6e-06 Score=90.11 Aligned_cols=184 Identities=9% Similarity=-0.019 Sum_probs=125.2
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhh----hHHHHHHHHHHHHHhhhHHH----HHhHhccchhHHH--HH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSST----ASKNVLDWSGTCYITPLIGA----FLADAYLGRYWTI--AI 102 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~----~~~~~~~~~~~~~~~~~~~G----~laDr~~Grr~~~--~~ 102 (559)
..++....+....+.-..+.++.|.+++.|.+... .+++.+.-.+...+..|+.. ++.||..+.+... .+
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~ 354 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTL 354 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHH
Confidence 33344444455555555666888887765544222 56777777777777777655 4455421333333 67
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc
Q 008623 103 FSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (559)
|.++.++++..+.+...... .....+.+++.+..++.++|.....|...+++.+..|++.
T Consensus 355 G~~l~~~~~~~~~~~~~~~~--------------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------ 414 (475)
T TIGR00924 355 GMLFCGASFLTFAASIWFAD--------------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------ 414 (475)
T ss_pred HHHHHHHHHHHHHHHHhhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------
Confidence 77777777766654311000 0112468888899999999999999999999999999987
Q ss_pred cccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 183 KSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 183 r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
|++++++++....+|..+++.+.....+..+|...|...++..++..+++++..
T Consensus 415 ~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 415 MGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998888776666777777666655554444444433
No 226
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.26 E-value=8e-06 Score=84.76 Aligned_cols=170 Identities=18% Similarity=0.194 Sum_probs=134.3
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhh
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTV 116 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~ 116 (559)
...+...+++++=-..+=+|--+.+|++..|...+...+..+..++....|++..|..+++++..+++...++++.+..+
T Consensus 215 ~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~ 294 (403)
T PF03209_consen 215 VFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIIL 294 (403)
T ss_pred HHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 33444555555555667788888999999999999999999999999999999886559999999999988888877766
Q ss_pred hhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhH
Q 008623 117 TASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINI 196 (559)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 196 (559)
+.. ..+.+.+....+++|++.|.+.....+...|..++++ .+..+|.+..+..+
T Consensus 295 a~~--------------------~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~ 348 (403)
T PF03209_consen 295 AGP--------------------LGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAI 348 (403)
T ss_pred HHh--------------------cccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHH
Confidence 632 1457889999999999999999999999999998876 78899998888888
Q ss_pred HHHHHhhhhhhhccc----------cCchhhhHHHHHHHHHHHHHH
Q 008623 197 GALIASSVLVWIQDN----------EGWGWGFGIPAVAMAIAVVSF 232 (559)
Q Consensus 197 G~~igp~i~~~l~~~----------~g~~~~f~i~~~~~~i~~~~~ 232 (559)
...+|-.++|.+.|. .+|..+|.+-++..+++++++
T Consensus 349 A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 349 ARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 888888777766442 246667777776666665544
No 227
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.22 E-value=4.2e-06 Score=81.22 Aligned_cols=158 Identities=19% Similarity=0.151 Sum_probs=96.6
Q ss_pred HHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCC
Q 008623 53 LVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRG 132 (559)
Q Consensus 53 l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (559)
...|+.+++|+...+.+.+........++...+.|-++||- |||+.-+..++. +++..++..
T Consensus 59 YvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtycit----YiLsCiTKh------------- 120 (454)
T KOG4332|consen 59 YVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCIT----YILSCITKH------------- 120 (454)
T ss_pred eeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehHH----HHHHHHhhc-------------
Confidence 34677788999999999988888888888899999999998 999987666554 444444422
Q ss_pred CcccccCcchhHHHHHHHHHHHHhccCCCccccc-ccccCCCCcchHhhhccccchhh-hhHHHhHHHHHHhhhhhhhcc
Q 008623 133 EETCQVTDAQSATFFVALYLIALGTGGIKPCVSS-YGADQFDDADEAEKKHKSSFFNW-FYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~-~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~iG~~igp~i~~~l~~ 210 (559)
.+++-.++++|.+.|+.....+++..+ +++|.-+++. .+.+-.+--++- ......+-++++.+.+-.+.+
T Consensus 121 -------SpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~-FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd 192 (454)
T KOG4332|consen 121 -------SPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRG-FEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVD 192 (454)
T ss_pred -------CCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccC-ChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 234566889999999999888777655 4455543221 000000111110 011222333444444444555
Q ss_pred ccC--chhhhHHHHHHHHHHHHHHHhcc
Q 008623 211 NEG--WGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 211 ~~g--~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
+++ --.+|-.++....++..+++..+
T Consensus 193 ~~slGPVAPFdAAacfLaigmAvil~~W 220 (454)
T KOG4332|consen 193 TFSLGPVAPFDAAACFLAIGMAVILSSW 220 (454)
T ss_pred HhccCCCCchHHHHHHHHHHHHHHHhhh
Confidence 544 45667766666666655554443
No 228
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.20 E-value=0.00024 Score=74.57 Aligned_cols=157 Identities=13% Similarity=0.078 Sum_probs=115.8
Q ss_pred hhhHHHHHhhh-cCCChhhhH-HHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCC
Q 008623 50 STNLVRYFKHQ-LDQSSSTAS-KNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVC 127 (559)
Q Consensus 50 ~~~l~~yl~~~-lg~s~~~~~-~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (559)
.+++..|+.+. .|++..|.. -+.-...-......++...+.|.. |-|++++++.+...+...++.+.
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~---------- 91 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG---------- 91 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 57899999887 899998864 566666777777888889999998 99999999988877777776665
Q ss_pred CCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhh
Q 008623 128 HGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVW 207 (559)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~ 207 (559)
.+...+.+..+..|++.+. ..+..+++-...|+++ -.++.+....+.-+|-.++.+++-.
T Consensus 92 -------------~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQl 151 (412)
T PF01770_consen 92 -------------TSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQL 151 (412)
T ss_pred -------------CcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677778888887776 3556677767777664 6677777777777777777766655
Q ss_pred hcc--ccCchhhhHHHHHHHHHHHHHHHhccc
Q 008623 208 IQD--NEGWGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 208 l~~--~~g~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
+.. ..++....+++.....+++++.++.++
T Consensus 152 lvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~ 183 (412)
T PF01770_consen 152 LVSFGGVSYFQLNYISLASVSLALLIALFLPM 183 (412)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 543 334667777777767777766655543
No 229
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.19 E-value=2.8e-08 Score=106.89 Aligned_cols=186 Identities=17% Similarity=0.057 Sum_probs=110.5
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIG 110 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~ 110 (559)
.+...+...++.+...+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||+.++.+.++.+++
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444444445444443444444445556666665 2222334455666777778999998 9999999998877776
Q ss_pred HHHHh-hhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 111 MTFLT-VTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 111 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
.+.++ .....+.. +...+...+............+..+....+.+|.+|.+. |+++.++
T Consensus 330 ~~~~~~~~~~~~~~--------------~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~ 389 (451)
T PF00083_consen 330 SLILGIIFFLGVSS--------------SSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGL 389 (451)
T ss_pred cccccccccccccc--------------ccccccccceeeeeccccccccccccccccccccccccc------ccccccc
Confidence 66664 11010110 000011121111111122222445677788999999998 9999999
Q ss_pred hhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhccccc
Q 008623 190 FYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSGTRLF 239 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~~~~~ 239 (559)
.+....+++.++|.+...+.+..+-...+.+.+.+.++..+..++..++.
T Consensus 390 ~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpET 439 (451)
T PF00083_consen 390 SYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPET 439 (451)
T ss_pred ccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEEeeC
Confidence 99999999999998888887776633445555555555555445545543
No 230
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.17 E-value=8.1e-05 Score=79.26 Aligned_cols=114 Identities=18% Similarity=0.199 Sum_probs=89.7
Q ss_pred ccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccch
Q 008623 378 SLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMS 457 (559)
Q Consensus 378 ~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 457 (559)
...+.+-.+-+++-++..+ +++| .+..+.+..|+.+.++=++.+.+++ +
T Consensus 410 v~~a~~~~gEI~~~ffs~k----lI~k-------iGHv~v~~lgLa~~~~Rf~~~S~L~--------------------n 458 (618)
T KOG3762|consen 410 VVSALCHAGEILFYFFSFK----LIEK-------IGHVNVMYLGLACNVGRFLYYSYLQ--------------------N 458 (618)
T ss_pred ehhhhhccchHHHHHHHHH----HHHH-------hcccceeeehhhHHHHHHHHHHHhc--------------------C
Confidence 3445555555555555554 4455 4444577888888888888877765 5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHH-HHHHHHHHHhhHHHHHhhhhhc
Q 008623 458 IMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSL-TTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 458 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
+|...+.-++.++..+.+....-+|+...+|+++|.++.|+.. ..-++|-.+|++++|.+....+
T Consensus 459 ~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg 524 (618)
T KOG3762|consen 459 PWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG 524 (618)
T ss_pred chheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh
Confidence 5667777799999999999999999999999999999999998 8889999999999999876543
No 231
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.14 E-value=4.7e-06 Score=90.27 Aligned_cols=164 Identities=16% Similarity=0.116 Sum_probs=108.2
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc---cchhHHHHHHHHHH
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY---LGRYWTIAIFSIIY 107 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~~~~~ 107 (559)
.+|...+..+|.....|++..|+|.|+++..|++..+++.+...+.++..++.+++|+++||. ..+|..+.....++
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~ 353 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLY 353 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 479999999999999999999999999986789999999999999999999999999999993 16666666665543
Q ss_pred H-HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 108 V-IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 108 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
. ++.+.+... ........+.+....+.....++...-..+....+. +|-..
T Consensus 354 ~~~g~~~l~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~-----k~~~~ 405 (495)
T KOG2533|consen 354 AIIGAISLLAA-----------------------AVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNT-----KALTT 405 (495)
T ss_pred HHHHHHHHHhh-----------------------ccchHHhHHHHhcchhhHHHHHHHHhhccccccchH-----HhHHH
Confidence 3 333433322 112222222223333333334455555556665543 35555
Q ss_pred hhhhhHHHhHHHHHHh-hhhhhhccccCchhhhHHHH
Q 008623 187 FNWFYFSINIGALIAS-SVLVWIQDNEGWGWGFGIPA 222 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp-~i~~~l~~~~g~~~~f~i~~ 222 (559)
.+.+..+.+.++.++| +..+.....++|...|....
T Consensus 406 ~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 406 VSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred HhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 5555555555555444 44445556678888884333
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.07 E-value=4.3e-05 Score=75.42 Aligned_cols=147 Identities=20% Similarity=0.283 Sum_probs=107.9
Q ss_pred hhhhHHHHHhhhcCCCh--hhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCC
Q 008623 49 MSTNLVRYFKHQLDQSS--STASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPV 126 (559)
Q Consensus 49 ~~~~l~~yl~~~lg~s~--~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (559)
.....+.+.. +.+.+. ...++..+.+.+...++.++.|+++||+ |||+.+..+.....++.+...+..
T Consensus 21 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~-------- 90 (338)
T COG0477 21 LSPALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAP-------- 90 (338)
T ss_pred HHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCc--------
Confidence 3344554444 444444 4788899999999999999999999999 999888888766455544444431
Q ss_pred CCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCC-cchHhhhccccchhhhhH-HHhHHHHHHhhh
Q 008623 127 CHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDD-ADEAEKKHKSSFFNWFYF-SINIGALIASSV 204 (559)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~iG~~igp~i 204 (559)
. ...+.+.+.|.+.|++.+...+...+++.|..|+ ++ |+...+.... ...+|..++|.+
T Consensus 91 ------------~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 151 (338)
T COG0477 91 ------------N-VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPLL 151 (338)
T ss_pred ------------c-chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2467788888889999999999999999999997 33 7888888777 578888888877
Q ss_pred hhhhccc--cCchhhhHHHHHH
Q 008623 205 LVWIQDN--EGWGWGFGIPAVA 224 (559)
Q Consensus 205 ~~~l~~~--~g~~~~f~i~~~~ 224 (559)
++.+... .+|+..|.+....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 152 AGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHhcchHHHHHHHHHH
Confidence 7766543 5688855555443
No 233
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.06 E-value=2.8e-05 Score=62.14 Aligned_cols=68 Identities=24% Similarity=0.148 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 37 GNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 37 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
...++...+...+.++++.|++ +.|++..+.|.+.++..+...+++|++|+++||+ ||++.++.....
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~-~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLK-QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhh-hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 3445555566667899999997 5999999999999999999999999999999999 988888776543
No 234
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.01 E-value=2.5e-05 Score=84.38 Aligned_cols=206 Identities=12% Similarity=-0.008 Sum_probs=139.8
Q ss_pred CCCccchhhHhhHHHHHHHHHHhhhhhHHHHHhh-hcCCChh------h----hHHHHHHHHHHHHHhhhHHHHHhHhcc
Q 008623 26 TGTWKACPFILGNECCERLAYYGMSTNLVRYFKH-QLDQSSS------T----ASKNVLDWSGTCYITPLIGAFLADAYL 94 (559)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~------~----~~~~~~~~~~~~~~~~~~~G~laDr~~ 94 (559)
++.+|.++.++.++++.-++++.+..+.+.|+.+ .+|-++. + ..+....+.+...+..++--++.+|+
T Consensus 254 ~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~- 332 (477)
T TIGR01301 254 KYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW- 332 (477)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 4457889999999999999999999999999875 4443321 1 12334445555566677778889998
Q ss_pred ch-hHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCC
Q 008623 95 GR-YWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFD 173 (559)
Q Consensus 95 Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~ 173 (559)
|+ |++...+.++.++++....+....++-... +..++....+.....+..++...+.|+..+.....-.+++++..+
T Consensus 333 g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~ 410 (477)
T TIGR01301 333 GAGKRLWGIVNIILAICLAATVLVTYVAKNSRY--YDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSS 410 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhcccc--ccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcc
Confidence 95 677788888888887777655321110000 000000000001113556666778899999999999999999998
Q ss_pred CcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccC--chhhhHHHHHHHHHHHHHHHhcccc
Q 008623 174 DADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEG--WGWGFGIPAVAMAIAVVSFFSGTRL 238 (559)
Q Consensus 174 ~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g--~~~~f~i~~~~~~i~~~~~~~~~~~ 238 (559)
++. .+.|..+|++|.+..+..++..+..|.+.+..| -.+++.++++..+++.+..++..++
T Consensus 411 ~~~----~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 411 NLG----AGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred ccC----CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 543 135889999999999999999988887655444 5567888888888887776665554
No 235
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.01 E-value=9.1e-05 Score=64.83 Aligned_cols=86 Identities=23% Similarity=0.317 Sum_probs=68.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHH
Q 008623 414 QLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRS 493 (559)
Q Consensus 414 ~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg 493 (559)
+++.+..+..+..++.+..... .+.+...+..++.+++.+...+....++.|..|++.|+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 86 (141)
T TIGR00880 27 RKPVLLVGLFIFVLSTAMFALS--------------------SNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERG 86 (141)
T ss_pred hhHHHHHHHHHHHHHHHHHHHh--------------------ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhh
Confidence 3345666666666666555432 24455666778899998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 494 LCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 494 ~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
+.+++.++...+|..+++.+.+.+.+
T Consensus 87 ~~~~~~~~~~~~g~~~~~~~~~~~~~ 112 (141)
T TIGR00880 87 VALGLMSAGIALGPLLGPPLGGVLAQ 112 (141)
T ss_pred HHHHHHHHhHHHHHHHhHHhHHHHhc
Confidence 99999999999999999999998764
No 236
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.00 E-value=4.3e-05 Score=83.47 Aligned_cols=146 Identities=10% Similarity=-0.011 Sum_probs=101.7
Q ss_pred HHHHHHhhhhhHHHHHhhhcCCChh----hhHHHHHHHHHHHHHhhhHHHHHhHhccchhHH-------HHHHHHHHHHH
Q 008623 42 ERLAYYGMSTNLVRYFKHQLDQSSS----TASKNVLDWSGTCYITPLIGAFLADAYLGRYWT-------IAIFSIIYVIG 110 (559)
Q Consensus 42 ~~~~~~~~~~~l~~yl~~~lg~s~~----~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~-------~~~~~~~~~~~ 110 (559)
....+......++.|.++..+.+.. ...++.+...+...+..|+.|++.||+ |||+. +.+|.++..++
T Consensus 281 f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~~~~ 359 (489)
T PRK10207 281 FYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLCSLG 359 (489)
T ss_pred HHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHHHHH
Confidence 3444444556778888754333211 234455555566778888899999998 98873 67777777766
Q ss_pred HHHHhhhhc-cCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhh
Q 008623 111 MTFLTVTAS-VSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNW 189 (559)
Q Consensus 111 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 189 (559)
++.+..... ... .....+.+++....++.|+|.++..|...+++.+..|++. ++.++++
T Consensus 360 ~~~~~~~~~~~~~--------------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g~ 419 (489)
T PRK10207 360 FLTAAAAGMWFAD--------------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILGM 419 (489)
T ss_pred HHHHHHHHHhhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHHH
Confidence 654432100 000 0112346677788889999999999999999999999987 8999999
Q ss_pred hhHHHhHHHHHHhhhhhhh
Q 008623 190 FYFSINIGALIASSVLVWI 208 (559)
Q Consensus 190 ~~~~~~iG~~igp~i~~~l 208 (559)
++...++|+.+|..++...
T Consensus 420 ~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 420 WFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999988777544
No 237
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.98 E-value=0.004 Score=65.45 Aligned_cols=62 Identities=19% Similarity=0.168 Sum_probs=51.2
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 008623 457 SIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVT 518 (559)
Q Consensus 457 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~ 518 (559)
+.|.+.+..+.-|+-.|...+..+..+.+..|++.|..++|+.....++|-.++++++-.+.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 45555566677888888888888889999999999999999999999999888887766654
No 238
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.95 E-value=5.1e-05 Score=83.15 Aligned_cols=175 Identities=13% Similarity=0.028 Sum_probs=113.1
Q ss_pred HHHHHHHHHhhhhhHHHHHhh--hcCCCh------hhhHHHHHHHHHHHHHhhhHH----HHHhHhccchhHHHHHHHHH
Q 008623 39 ECCERLAYYGMSTNLVRYFKH--QLDQSS------STASKNVLDWSGTCYITPLIG----AFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 39 ~~~~~~~~~~~~~~l~~yl~~--~lg~s~------~~~~~~~~~~~~~~~~~~~~~----G~laDr~~Grr~~~~~~~~~ 106 (559)
.+.....+|.+..-++.++.. ..+.+. ...+++.+.-.+...+..|+. +++.||+ +..+.+.++.++
T Consensus 281 ~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~~l 359 (500)
T PRK09584 281 LMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGMVL 359 (500)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHHHH
Confidence 445556666666666666542 111111 124566666666666776766 5555555 666788889999
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
.++++..+.......+ +....+.+++.+..++.++|.++..|...+++.+..|++. |+++
T Consensus 360 ~~l~f~~l~~~~~~~~--------------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~ 419 (500)
T PRK09584 360 CSGAFLVLPLGAKFAN--------------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFI 419 (500)
T ss_pred HHHHHHHHHHHHHhcC--------------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHH
Confidence 9999888776532111 0111345678888999999999999999999999999987 9999
Q ss_pred hhhhhHHHhHHHHHHhhhhhhhc----------cccCchhhhHHHHHHHHHHHHHHHh
Q 008623 187 FNWFYFSINIGALIASSVLVWIQ----------DNEGWGWGFGIPAVAMAIAVVSFFS 234 (559)
Q Consensus 187 ~~~~~~~~~iG~~igp~i~~~l~----------~~~g~~~~f~i~~~~~~i~~~~~~~ 234 (559)
+|.+..+..+|..++..+.+... ...++.+.|...++..++..++++.
T Consensus 420 ~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~ 477 (500)
T PRK09584 420 MGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLL 477 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777777777665554221 1123566776666544433333333
No 239
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.92 E-value=2.2e-05 Score=85.34 Aligned_cols=136 Identities=9% Similarity=-0.033 Sum_probs=105.6
Q ss_pred hhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccc
Q 008623 58 KHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQ 137 (559)
Q Consensus 58 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (559)
++.+|+++.+.|.+.....++..++..+.+++.+|+ +.|+++.++.++.+++.....+.....+..
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~------------- 345 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNLA------------- 345 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeeccccc-------------
Confidence 457899999999999999999999999999999998 999999999988887765543220000000
Q ss_pred cCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccC
Q 008623 138 VTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEG 213 (559)
Q Consensus 138 ~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g 213 (559)
..-.+.+.+....++.+++.+........++.+..|++. +++.++++....++|..+++.+++.+.+..|
T Consensus 346 ~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 346 FGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred cCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 000112234444567777777777888999999999987 8999999999999999999999999988776
No 240
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.84 E-value=2.6e-05 Score=82.88 Aligned_cols=172 Identities=10% Similarity=-0.036 Sum_probs=130.8
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMT 112 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~ 112 (559)
.+.++..++...+.-.+..++--|++ +++..+.-.|.....-..+-.+.-++.+++-.|+ |+-+++..+++..++=++
T Consensus 374 llff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf~ 451 (618)
T KOG3762|consen 374 LLFFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRFL 451 (618)
T ss_pred EehhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHHH
Confidence 34455555555665556666655664 5565555556444444556666778889999998 999999999988877777
Q ss_pred HHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhH
Q 008623 113 FLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYF 192 (559)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 192 (559)
..... +|+|+.+..-++.|+..+.++.++.+|+++..|++- |.++-++...
T Consensus 452 ~~S~L-----------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g 502 (618)
T KOG3762|consen 452 YYSYL-----------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQG 502 (618)
T ss_pred HHHHh-----------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHH
Confidence 76655 678999999999999999999999999999999997 7888887554
Q ss_pred -HHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 193 -SINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 193 -~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
.-.+|-.+|.+++|.+.+.+|-+..|.+.++..++.++.....
T Consensus 503 ~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 503 IFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred HhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHh
Confidence 4478888999999999999998888887776666555554443
No 241
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.80 E-value=0.022 Score=60.92 Aligned_cols=189 Identities=9% Similarity=-0.129 Sum_probs=106.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVI 109 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~ 109 (559)
|..+.+...+++.+..-=+...-.+.|+.+.+.-+.--.+..-..-.+...++.+.-|.+.||. .|.+++....+..-+
T Consensus 2 ~~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~ 80 (432)
T PF06963_consen 2 RALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNL 80 (432)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHH
Confidence 3456777888888888777777788888876654555556666666778888889999999998 999988776554222
Q ss_pred ----HHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHH-HhccCCCcccccccccCCCCcchHhhhccc
Q 008623 110 ----GMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIA-LGTGGIKPCVSSYGADQFDDADEAEKKHKS 184 (559)
Q Consensus 110 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g-~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 184 (559)
+...+......+.-. . ........+++...+.+ +..=.....-.+.=-|+...=..+....+.
T Consensus 81 sv~~s~~~~~~l~~~~~~~-----------~-~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La 148 (432)
T PF06963_consen 81 SVAASCALFLLLLSYPSSS-----------S-QSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALA 148 (432)
T ss_pred HHHHHHHHHHHHHhCCccc-----------c-ccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHH
Confidence 222222111111100 0 00111222222222222 111111122223334444321000111245
Q ss_pred cchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 185 SFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 185 ~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
+..+...-.-.+.-++||++.|.+....+......+.+...++.+..
T Consensus 149 ~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 149 RMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 55555555556789999999999988888877666666555555543
No 242
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=97.74 E-value=1.2e-05 Score=84.04 Aligned_cols=111 Identities=15% Similarity=0.217 Sum_probs=89.2
Q ss_pred cccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchh
Q 008623 379 LSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSI 458 (559)
Q Consensus 379 ~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (559)
++..-.++.++..|+.+. +.+| ..+.+.+.+|..+..++.+..++.. .+
T Consensus 73 l~~vf~v~~~i~sPl~gy----Ladr-------yNR~~v~~vG~~iW~~Av~~~~fs~--------------------~F 121 (493)
T KOG1330|consen 73 LQTVFIVVFMIASPLFGY----LADR-------YNRKRVIAVGIFIWTLAVFASGFSN--------------------HF 121 (493)
T ss_pred hhHHHHHHHHHHHHHHHH----HHhh-------cCcceEEeeHHHHHHHHHHHHHHHH--------------------HH
Confidence 344444555666677666 3333 3444678889888888887777642 67
Q ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhh
Q 008623 459 MWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTSI 520 (559)
Q Consensus 459 ~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~ 520 (559)
|.+.+.-.+.|+||....|..+++++|.+|++.|++..++++++..+|+.+|-..+..+.+.
T Consensus 122 wq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 122 WQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 88889999999999999999999999999999999999999999999999999888888764
No 243
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.67 E-value=8.8e-05 Score=77.67 Aligned_cols=180 Identities=16% Similarity=0.077 Sum_probs=120.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHH--------HHHHHHHHHHH-hhhHHHHHhHhccchhHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASK--------NVLDWSGTCYI-TPLIGAFLADAYLGRYWTI 100 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~--------~~~~~~~~~~~-~~~~~G~laDr~~Grr~~~ 100 (559)
+.+...+..-|....++|+...+...-++ ..|..+..... .......+..+ +..++..+.|++ |||++-
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 44555566677788888887766555443 34444332222 22222223333 566778889998 999999
Q ss_pred HHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhh
Q 008623 101 AIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEK 180 (559)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 180 (559)
+.+.+++++..+.++..-. . .......+...-+.+-++.-+.......+-+|.||.+.
T Consensus 382 ~~GF~~~~i~~~~~~~~y~--~----------------~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv---- 439 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGPYN--Q----------------LENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV---- 439 (538)
T ss_pred HhhHHHHHHHHHHHcCCcc--c----------------ccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH----
Confidence 9999998887777764311 0 00111111122223334444544555566799999998
Q ss_pred hccccchhhhhHHHhHHHHHHhhhhhhhcc-----ccCchhhhHHHHHHHHHHHHHHHhc
Q 008623 181 KHKSSFFNWFYFSINIGALIASSVLVWIQD-----NEGWGWGFGIPAVAMAIAVVSFFSG 235 (559)
Q Consensus 181 ~~r~~~~~~~~~~~~iG~~igp~i~~~l~~-----~~g~~~~f~i~~~~~~i~~~~~~~~ 235 (559)
|+...++.....-+|+++|.....++.+ ..|.+.+|++.+.+++++.+..++.
T Consensus 440 --R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 440 --RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred --hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 9999999999999999999999999998 7789999999988888777655443
No 244
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.61 E-value=0.0046 Score=66.73 Aligned_cols=163 Identities=8% Similarity=-0.005 Sum_probs=97.3
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCC-----hhhhHHHHHHHHHHHHHh-hhHHHHHhHhccchhHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQS-----SSTASKNVLDWSGTCYIT-PLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-----~~~~~~~~~~~~~~~~~~-~~~~G~laDr~~Grr~~~~~~ 103 (559)
|.++.+.+..||....|+.+.+ +++.+..+ .....++.....+.+.+. .++-+++++|+ +|++.+...
T Consensus 7 ~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~~ 80 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYTV 80 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHHH
Confidence 4466666777777777665543 56776653 234566666554544444 78889999998 999988877
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccc----cCcc---------hhHHHHHHHHHHHHhccCCCc-ccccccc
Q 008623 104 SIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQ----VTDA---------QSATFFVALYLIALGTGGIKP-CVSSYGA 169 (559)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------~~~~~~~~~~l~g~g~g~~~~-~~~~~~~ 169 (559)
...+..-..++++.. .|. .+...-...+. .... +.|...+.-....+-.....+ ..+++..
T Consensus 81 ~~~F~~~f~lF~~vl-~p~----~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fan 155 (472)
T TIGR00769 81 ISPFLGFFALFAFVI-YPL----SDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFAN 155 (472)
T ss_pred HHHHHHHHHHHHHHH-hcc----hhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766665555554441 121 00000000000 0000 011111111122222223333 5678899
Q ss_pred cCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhc
Q 008623 170 DQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQ 209 (559)
Q Consensus 170 ~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~ 209 (559)
|.++.+| ..|.++++..+.|+|..+++.+..++.
T Consensus 156 di~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 156 QITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred hcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887 789999999999999999998888876
No 245
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.61 E-value=0.00091 Score=73.57 Aligned_cols=148 Identities=14% Similarity=-0.017 Sum_probs=87.8
Q ss_pred CccchhhHhhHHHHHHHHHH-hhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYY-GMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
.+|.....+....+.+.+.+ .+..+.+..+ +..|.+... ........+...++..++.++.||+ |||+.++.+.+.
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if-~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~ 368 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIF-KSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAG 368 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHH-HhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHH
Confidence 44444445555555555444 3344455444 456665443 4555566677777788889999999 999999999999
Q ss_pred HHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccc
Q 008623 107 YVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSF 186 (559)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 186 (559)
+.++.+.++......... . . .........+....+.......+..|..+.+.+|.+|.+. |+++
T Consensus 369 m~~~~~~~~~~~~~~~~~--~-------~-~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~ 432 (513)
T KOG0254|consen 369 MSICLVILAVVGVFALYY--P-------N-SSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKG 432 (513)
T ss_pred HHHHHHHHHHHHHHhccC--C-------C-cccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------Hhhh
Confidence 999988887653211100 0 0 0000111222222222333344455666778899999987 8888
Q ss_pred hhhhhHHH
Q 008623 187 FNWFYFSI 194 (559)
Q Consensus 187 ~~~~~~~~ 194 (559)
.++.....
T Consensus 433 ~s~~~~~n 440 (513)
T KOG0254|consen 433 ASLAVAVN 440 (513)
T ss_pred HHHHHHHH
Confidence 87744433
No 246
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.53 E-value=0.0003 Score=73.72 Aligned_cols=167 Identities=13% Similarity=0.149 Sum_probs=117.6
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhc---cchhHHHHHH-HH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAY---LGRYWTIAIF-SI 105 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~---~Grr~~~~~~-~~ 105 (559)
+.++....+.+...+++-.=..+++.|++ .+|.+.+..+.+.....+...+.+|+.|..+||. +||||-++.. ..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 45566666677777777766788999986 7999999999999999999999999999999983 3888766654 44
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
..+++.++...+..+-.. .+|.+|.. ........++++.-+.=++.-......-++++|...+++ ++.+
T Consensus 111 ~i~~~l~Lig~aaDig~~--lgd~~~~~----~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~-----~~~~ 179 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLL--LGDNERKP----VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA-----KKTR 179 (498)
T ss_pred HHHHHHhhhhhHhhhhHH--hcCCcccc----cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh-----hhhc
Confidence 566676666655322211 13332110 011224455566666667776777778899999998776 1233
Q ss_pred chhhhhHHHhHHHHHHhhhhhhh
Q 008623 186 FFNWFYFSINIGALIASSVLVWI 208 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l 208 (559)
+.+++.....+|+.+|...++++
T Consensus 180 Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 180 ANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred cchhHHHHHHhcceeeeeccccc
Confidence 88999999999999998777643
No 247
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.27 E-value=0.16 Score=52.60 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhc
Q 008623 460 WQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 460 ~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
..+..+.+.+...-.......++.++.+|+...|+.|.+.|+..++|+-.=..++..+.|..+
T Consensus 371 l~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 371 LLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 344567888887777788889999999999999999999999999999887788888877543
No 248
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.24 E-value=0.00051 Score=77.41 Aligned_cols=133 Identities=11% Similarity=0.103 Sum_probs=92.3
Q ss_pred ccccccceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHH--HHHh----------hh
Q 008623 378 SLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIR--LRMV----------RE 445 (559)
Q Consensus 378 ~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~--~~~~----------~~ 445 (559)
++.+...++..+..++.+. +.+|. ++++.+++|.++++++.++.++.+-.. ++.. ..
T Consensus 72 ~i~s~~~i~~~~~~i~v~~----~~~r~-------~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~ 140 (633)
T TIGR00805 72 LINGSYEIGNLLLIIFVSY----FGTKL-------HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSA 140 (633)
T ss_pred eeeehhhHHHHHHHHHHHH----hhccc-------CcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccc
Confidence 4444555566666666655 45553 334578889999999988887653211 0000 00
Q ss_pred cCCCC-----------------CCCc--cchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHH
Q 008623 446 HNYYD-----------------LPEM--PMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALG 506 (559)
Q Consensus 446 ~~~~~-----------------~~~~--~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 506 (559)
+...| .+.. ...+..+++.-++.|+|.+...+...+++.|.+|++.|+...|+++....+|
T Consensus 141 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG 220 (633)
T TIGR00805 141 NSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFG 220 (633)
T ss_pred ccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhh
Confidence 00011 0111 1134456678899999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHhhhhh
Q 008623 507 NYLSSLLVTIVTSIS 521 (559)
Q Consensus 507 ~~lg~~l~~~v~~~~ 521 (559)
..+|+++++.+.+..
T Consensus 221 ~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 221 PAFGYLLGSFCLQIY 235 (633)
T ss_pred hHHHHHHHHHHHhcc
Confidence 999999999988654
No 249
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.14 E-value=0.0023 Score=68.47 Aligned_cols=102 Identities=13% Similarity=0.065 Sum_probs=81.3
Q ss_pred ceeeehhhhhhhhhhhhhhhhccCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHH
Q 008623 384 TLSVIFWVPIYDRFIVPVTRKFTGHKNGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVP 463 (559)
Q Consensus 384 ~l~~il~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 463 (559)
..+..+...+.+. +.+|++.| +.+.++.+...+..++.++.. +...+.+
T Consensus 72 ~ysYal~qIp~Gl----LaDrlG~K-------~vL~l~~l~Wsl~t~L~~fa~--------------------Sl~~L~i 120 (511)
T TIGR00806 72 PYSHLAVLVPVFL----LTDYLRYK-------PVLVLQALSFVCVWLLLLLGT--------------------SVWHMQL 120 (511)
T ss_pred HHHHHHHHHHHHH----HHHHhCch-------HHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHH
Confidence 3444555555554 55664443 567777777777777766643 6677888
Q ss_pred HHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008623 464 QYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIV 517 (559)
Q Consensus 464 ~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v 517 (559)
.-+++|++|+... ....+++..+|+++|++++|+++....+|.++++.+++++
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999 9999999999999999999999999999999999999984
No 250
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.09 E-value=0.0078 Score=55.01 Aligned_cols=106 Identities=15% Similarity=0.195 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHH
Q 008623 70 KNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVA 149 (559)
Q Consensus 70 ~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (559)
.-.++.+....+.+++...+.+++ |.|+.++++.+..++-...... .+.+.++.+
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~------------------------~~~~~l~~~ 95 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY------------------------PNSYTLYPA 95 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh------------------------hhHHHHHHH
Confidence 344556666777778888888998 9999999999876654433321 346778888
Q ss_pred HHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhh
Q 008623 150 LYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLV 206 (559)
Q Consensus 150 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~ 206 (559)
-++.|++.+..+.+...++.+..++++ +++..+++....+.+..+|.++.-
T Consensus 96 s~l~G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 96 SALLGFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HHHHhhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999887765 788888877777777777765543
No 251
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.82 E-value=0.015 Score=61.21 Aligned_cols=157 Identities=13% Similarity=0.030 Sum_probs=101.5
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccch-hHHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGR-YWTIAIFSIIYV 108 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Gr-r~~~~~~~~~~~ 108 (559)
+.+.+++++.......+|+....+-.-+ ..-|++...+|.+.....+.++++..+.|.++||. .+ |++++.......
T Consensus 266 ~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dkt-k~fk~~~~v~~~~~~ 343 (480)
T KOG2563|consen 266 RQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKT-KKFKLTTLVLYLFAL 343 (480)
T ss_pred ccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHHHH
Confidence 4566666666666666666554443222 34577778899999999999999999999999998 54 445555555444
Q ss_pred HHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 109 IGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
++...+...+. .....+.++..-.++|++..+..|.-.-+..|..-+.. -+.-.|
T Consensus 344 v~~~~l~~~t~-------------------~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsG 398 (480)
T KOG2563|consen 344 VGTLMLLTCTL-------------------FLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSG 398 (480)
T ss_pred HHHHHHHHhhc-------------------cCCceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------Ccccce
Confidence 44322222211 11234556666677888888888888777777664433 255566
Q ss_pred hhhHHHhHHHHHHhhhhhhhccccC
Q 008623 189 WFYFSINIGALIASSVLVWIQDNEG 213 (559)
Q Consensus 189 ~~~~~~~iG~~igp~i~~~l~~~~g 213 (559)
..+...++-+.+=..+.+...+..+
T Consensus 399 ll~~~gq~f~~~~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 399 LLNLSGQIFGVILVFIMGILAEDLG 423 (480)
T ss_pred eEEeehhHHHHHHHHHHHHHhhccC
Confidence 6677777766666666676766655
No 252
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=96.72 E-value=0.018 Score=62.74 Aligned_cols=138 Identities=10% Similarity=0.025 Sum_probs=93.1
Q ss_pred hhhHHHHHhhhcCCC----hhhhHHHHHHHHHHHHHhhhHHHHHhHhccchh-H------HHHHHHHHHHHHHHHHhhhh
Q 008623 50 STNLVRYFKHQLDQS----SSTASKNVLDWSGTCYITPLIGAFLADAYLGRY-W------TIAIFSIIYVIGMTFLTVTA 118 (559)
Q Consensus 50 ~~~l~~yl~~~lg~s----~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-~------~~~~~~~~~~~~~~~~~~~~ 118 (559)
.+.+..|.++.-+.+ .-..++..+.-.+...+..|+.+++=.|. +|| | =+.+|+++..+++..+.+..
T Consensus 288 ~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l-~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~ 366 (493)
T PRK15462 288 GSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKES-VAGNRTVRIWGKFALGLGLMSAGFCILTLSA 366 (493)
T ss_pred hHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHH-hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666665543221 12255666777777777788877776665 432 2 15677777888877776543
Q ss_pred ccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHH-hHH
Q 008623 119 SVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSI-NIG 197 (559)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~iG 197 (559)
.... .....+.+++++..+++.+|.-+..|...+++++..|++. |+..+|.+.... .+|
T Consensus 367 ~~~~--------------~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~------~g~~mg~w~l~~~~~~ 426 (493)
T PRK15462 367 RWSA--------------MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGV------TGVLTGIYMLLSGAIA 426 (493)
T ss_pred hhcC--------------CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHH------HHHHHHHHHHHHHHHH
Confidence 2111 0112456778888889999999999999999999999987 999999886643 577
Q ss_pred HHHHhhhhhhh
Q 008623 198 ALIASSVLVWI 208 (559)
Q Consensus 198 ~~igp~i~~~l 208 (559)
..++..+++..
T Consensus 427 ~~~~g~~~~~~ 437 (493)
T PRK15462 427 NYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHh
Confidence 77666665544
No 253
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=96.65 E-value=0.015 Score=64.52 Aligned_cols=154 Identities=11% Similarity=0.040 Sum_probs=106.6
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChh---hhHHHHHHHHHHHHHhhhHHHHHhHhccchh-HHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSS---TASKNVLDWSGTCYITPLIGAFLADAYLGRY-WTIAI 102 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr-~~~~~ 102 (559)
+.+|.+...+++.++....+|.+..+.|......++-+.. +.++......++..++..+.|.+.-++ +|- +.+++
T Consensus 307 ~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li~ 385 (599)
T PF06609_consen 307 KDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLIF 385 (599)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHHH
Confidence 4456777777888888888998888888888777766653 567777888888888899999999877 764 45556
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhc
Q 008623 103 FSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKH 182 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 182 (559)
+.++++++.-+++.. -| ++....+...++.|+|.|...........-..|+++
T Consensus 386 ~~~~~ta~~Gama~~--~~-------------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~------ 438 (599)
T PF06609_consen 386 GSVLMTAFCGAMAAV--RP-------------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED------ 438 (599)
T ss_pred HHHHHHHHHHHHHHc--cC-------------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH------
Confidence 665555443333322 11 122223455667788888776666565555667665
Q ss_pred cccchhhhhHHHhHHHHHHhhhhhhh
Q 008623 183 KSSFFNWFYFSINIGALIASSVLVWI 208 (559)
Q Consensus 183 r~~~~~~~~~~~~iG~~igp~i~~~l 208 (559)
.+.+.++....-.+|+.+|..+...+
T Consensus 439 ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 439 IGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 88888888888888888887665544
No 254
>PTZ00207 hypothetical protein; Provisional
Probab=96.55 E-value=0.0092 Score=66.25 Aligned_cols=174 Identities=10% Similarity=0.060 Sum_probs=118.1
Q ss_pred chhhHhhHHHHHHHHHHhhhhhHHHHHhhhc-CCCh-hhhHH-HHHHHHHHHHHhhhHHHHHhHhccchhH--------H
Q 008623 31 ACPFILGNECCERLAYYGMSTNLVRYFKHQL-DQSS-STASK-NVLDWSGTCYITPLIGAFLADAYLGRYW--------T 99 (559)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-g~s~-~~~~~-~~~~~~~~~~~~~~~~G~laDr~~Grr~--------~ 99 (559)
.+|++++..+|...+-..+..++- .+.+.+ |.+. .+... .++..++..+++.+.+|.+.... -||+ .
T Consensus 354 d~Wll~~~~~cg~g~gl~~~~N~~-qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~-~~~~~~~r~prt~ 431 (591)
T PTZ00207 354 RLWCLLWSIFCCVGAHFVIIFNAR-FIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWS-QKRRAEDRVPITI 431 (591)
T ss_pred hHHHHHHHHHHhhCchheeeecHH-HHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHH-HhhccccccchhH
Confidence 589999999988777776666664 444567 6633 32233 78999999999999999987322 3332 2
Q ss_pred HHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHh
Q 008623 100 IAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAE 179 (559)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~ 179 (559)
.+....++.++.+++.+. +| ...++++-++.|++.|..++.....++|+|. ++
T Consensus 432 ~l~~~~~~~~~~lll~~~--~p---------------------~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~--- 484 (591)
T PTZ00207 432 ALFIPSVCIITMLTLFLT--LP---------------------KAALPLPYFIAAFANGFMAATIALVTRTIFA-KD--- 484 (591)
T ss_pred HHHHHHHHHHHHHHHHHH--CC---------------------ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cc---
Confidence 222222355555555554 22 1358889999999999999999999999999 54
Q ss_pred hhccccchhhhhHHHhHHHHHH-hhhhhhhcccc----------C---chhhhHHHHHHHHHHHHHHHhcc
Q 008623 180 KKHKSSFFNWFYFSINIGALIA-SSVLVWIQDNE----------G---WGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 180 ~~~r~~~~~~~~~~~~iG~~ig-p~i~~~l~~~~----------g---~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
-++-+++...+.-+|..+= -.+.|.+.|.. | ++.+|.+.+.+.+++.+.....+
T Consensus 485 ---~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~ 552 (591)
T PTZ00207 485 ---PAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYVH 552 (591)
T ss_pred ---hHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhee
Confidence 6777777777777776654 33445554321 2 77888888777777766654444
No 255
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.53 E-value=0.013 Score=60.48 Aligned_cols=125 Identities=13% Similarity=0.097 Sum_probs=97.6
Q ss_pred hhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhH-HHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccc
Q 008623 58 KHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYW-TIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETC 136 (559)
Q Consensus 58 ~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (559)
.+.+|+++.+.|.+.+...+.+.+.+..-+...||..|.-+ ....++....-..++...+
T Consensus 289 ~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~------------------- 349 (451)
T KOG2615|consen 289 HGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA------------------- 349 (451)
T ss_pred cCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc-------------------
Confidence 56789999999999988888888888888888888744433 3334444444444444333
Q ss_pred ccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc
Q 008623 137 QVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN 211 (559)
Q Consensus 137 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~ 211 (559)
.....+.++..+-.+..+...++...++....|+++ ||...|+......++-.+||++.|.+..+
T Consensus 350 ----~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 350 ----RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred ----ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 234567788888888888889999999999999998 99999999999999999999999877654
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.42 E-value=0.013 Score=63.33 Aligned_cols=151 Identities=14% Similarity=0.122 Sum_probs=115.0
Q ss_pred CccchhhHhhHHHHHHHHHH-hhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHH-HHhHhccchhHHHHHHHH
Q 008623 28 TWKACPFILGNECCERLAYY-GMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGA-FLADAYLGRYWTIAIFSI 105 (559)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G-~laDr~~Grr~~~~~~~~ 105 (559)
+.|.++.+++..+.....-. +....++.|+...++++..+.+.+.+.......++..+.. .+.-.+ |-|+++.+|+.
T Consensus 238 ~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~ 316 (463)
T KOG2816|consen 238 PDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLL 316 (463)
T ss_pred CCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHH
Confidence 34555555554444333332 2232557788899999999999999999999999999888 555554 99999999999
Q ss_pred HHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhcccc
Q 008623 106 IYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSS 185 (559)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 185 (559)
...+...+.++. .+.|+.+....+.+ ..+...|...+.++.+.++++ +++
T Consensus 317 ~~~~~~~~~af~-----------------------~~~w~~~~~~v~~~-~~~~~~pa~~s~~s~~v~~~e------~g~ 366 (463)
T KOG2816|consen 317 SEFLQLLLFAFA-----------------------TETWMMFAAGVVVA-LAGIVFPAIRAFASILVSPEE------QGK 366 (463)
T ss_pred HHHHHHHHHHHh-----------------------ccchhhhHHHHHHH-hhcchhHHHHhHHHhhccccc------ccc
Confidence 999998888887 34566665554443 455667888999999999987 999
Q ss_pred chhhhhHHHhHHHHHHhhhhhhhc
Q 008623 186 FFNWFYFSINIGALIASSVLVWIQ 209 (559)
Q Consensus 186 ~~~~~~~~~~iG~~igp~i~~~l~ 209 (559)
.+++....-.+.++++|.+-+.+.
T Consensus 367 v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 367 VFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hhhHHHHHHHHhhhhhHHHHHHHH
Confidence 999999999999999998877663
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.34 E-value=0.035 Score=45.00 Aligned_cols=70 Identities=11% Similarity=-0.005 Sum_probs=59.7
Q ss_pred HHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhh
Q 008623 46 YYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVT 117 (559)
Q Consensus 46 ~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~ 117 (559)
-+.+.+.+| .++++.++|..+.+++.+..++++.++.+...++.++. .+++.+..+.+..++....+++.
T Consensus 8 RFayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 8 RFAYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555 56789999999999999999999999999999999987 88899999998888888888766
No 258
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.24 E-value=0.052 Score=59.67 Aligned_cols=106 Identities=11% Similarity=0.117 Sum_probs=73.8
Q ss_pred HHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhc
Q 008623 78 TCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGT 157 (559)
Q Consensus 78 ~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~ 157 (559)
.-..+....+.+.|+. |||.....+.++..++.+..++.. . ..+.+...+...+..++.
T Consensus 362 ~~~p~~~~~~~~~~~~-gR~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~ 420 (521)
T KOG0255|consen 362 VELPAYFRNGLLLPEF-GRRPPLFLSLFLAGIGLLLFGWLP---D-----------------DLGGWLHWILPLLGKFFI 420 (521)
T ss_pred HHhhHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHhh---c-----------------cchhHHHHHHHHHHHHHH
Confidence 4455555668999998 999999999999888888887662 1 111111222222223333
Q ss_pred cCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcc
Q 008623 158 GGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~ 210 (559)
+........+.+|++|+.. |..+.+.......+|++++|.+......
T Consensus 421 ~~~~~~~~~~~~el~pt~~------r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 421 GSAFNLIFLYSAELIPTVV------RNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHHHHhhccHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3333445788899999997 9999999999999999999987654443
No 259
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.88 E-value=0.022 Score=64.34 Aligned_cols=64 Identities=41% Similarity=0.675 Sum_probs=58.4
Q ss_pred CCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHH
Q 008623 452 PEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVT 515 (559)
Q Consensus 452 ~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 515 (559)
+.++++.+|+++++++.++||.+..+..+++.++++|++||..+.+++..+.++|+.+...+..
T Consensus 559 ~~~~~~~~wq~pq~~~~~~~e~~~~~~~~e~~~~~~p~~mks~~~a~~~~~~~~g~~~~~~~~~ 622 (654)
T TIGR00926 559 SVNTVSILWQIPQYVILTAGEVLFSVTGLEFSYSQAPPNMKSVLQALWLLTVAIGNLIVVVIAE 622 (654)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHHHHHHHHhhHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667899999999999999999999999999999999999999999999999999877665554
No 260
>PRK03612 spermidine synthase; Provisional
Probab=95.88 E-value=0.21 Score=54.92 Aligned_cols=170 Identities=12% Similarity=0.007 Sum_probs=93.0
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHH-HHHHHHH-HHHHH
Q 008623 36 LGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIA-IFSIIYV-IGMTF 113 (559)
Q Consensus 36 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~-~~~~~~~-~~~~~ 113 (559)
....+....+..++.......+...+|-+..+.+.+++++.++..++..++|+++++. -|+...+ ++..+.. ++..+
T Consensus 20 ~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~l 98 (521)
T PRK03612 20 LAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSALI 98 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555566667777888999999999999999999999999887553 2322211 1111111 11111
Q ss_pred HhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHH
Q 008623 114 LTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFS 193 (559)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 193 (559)
+....... .......+...++.++..|+..|....+..+...++ -++..|-.|..
T Consensus 99 l~~~~~~~------------------~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~-------~g~~~g~ly~~ 153 (521)
T PRK03612 99 LYAAFAFQ------------------GLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQH-------LGHNVATVLAA 153 (521)
T ss_pred HHHHHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-------hhhhhhhhHhH
Confidence 11110000 011112233334556777776666655554432211 35566777888
Q ss_pred HhHHHHHHhhhhhhhc-cccCchhh-hHHHHHHHHHHHHH
Q 008623 194 INIGALIASSVLVWIQ-DNEGWGWG-FGIPAVAMAIAVVS 231 (559)
Q Consensus 194 ~~iG~~igp~i~~~l~-~~~g~~~~-f~i~~~~~~i~~~~ 231 (559)
..+|+++|.++.+++. ...|-... +.++.+..+++++.
T Consensus 154 ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 154 DYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred HhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8899999988887654 46674434 43333333344333
No 261
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.15 Score=57.40 Aligned_cols=176 Identities=16% Similarity=0.135 Sum_probs=111.8
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHH-HHHHhhhHHHHHhHhc-cchhHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSG-TCYITPLIGAFLADAY-LGRYWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~-~Grr~~~~~~~~~~ 107 (559)
+.+...++...++...+-++.+++|-|+++++|.+++.+..+.+...+ +..++..++|++.-|+ +..|.+..+.++..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 456677788999999999999999999999999999999999976654 5667788999998886 23455555554444
Q ss_pred HHHHHH---Hhhhh--cc------------C---------------------CCCCCCCCCCCC----------------
Q 008623 108 VIGMTF---LTVTA--SV------------S---------------------GLKPVCHGPRGE---------------- 133 (559)
Q Consensus 108 ~~~~~~---~~~~~--~~------------~---------------------~~~~~~~~~~~~---------------- 133 (559)
.+..++ ..+.. +. | .+.|+|+.-..+
T Consensus 472 ~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~ 551 (735)
T KOG3626|consen 472 VLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTS 551 (735)
T ss_pred HHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCC
Confidence 433333 11110 00 0 011123221000
Q ss_pred ------cccc--c----------------C-cchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchh
Q 008623 134 ------ETCQ--V----------------T-DAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFN 188 (559)
Q Consensus 134 ------~~~~--~----------------~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 188 (559)
|-|. . + ......+++..++..+..+...+....++-+.+++++ |+-++|
T Consensus 552 ~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG 625 (735)
T KOG3626|consen 552 DGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALG 625 (735)
T ss_pred CCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhH
Confidence 0111 1 1 1223333333334444444444566677788888887 999999
Q ss_pred hhhHHH-hHHHHHHhhhhhhhccc
Q 008623 189 WFYFSI-NIGALIASSVLVWIQDN 211 (559)
Q Consensus 189 ~~~~~~-~iG~~igp~i~~~l~~~ 211 (559)
+..+.. -+|.+-+|++-|++.|.
T Consensus 626 ~~~~~irllg~IPsPIifG~~ID~ 649 (735)
T KOG3626|consen 626 FQWMLIRLLGFIPSPIIFGAVIDT 649 (735)
T ss_pred HHHHHHHHHhcCCchHhhhhhHhh
Confidence 977765 56888889999999864
No 262
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=95.59 E-value=0.0033 Score=69.41 Aligned_cols=172 Identities=15% Similarity=0.152 Sum_probs=0.0
Q ss_pred cchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHH-HHHHhhhHHHHHhHhc-cchhHHHHHHHHHH
Q 008623 30 KACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSG-TCYITPLIGAFLADAY-LGRYWTIAIFSIIY 107 (559)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~-~Grr~~~~~~~~~~ 107 (559)
+.+....+...++....-++.+++|-|+++++++++++++.+.+...+ +..++.+++|++..|+ ++.|+++.+..+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 345666777888888888999999999999999999999999887665 7778899999999887 23455554444433
Q ss_pred HHHHHHHhhhhccCCCCCCCCCCCCC-----------------------------------cccccC-cchhHHHHHHHH
Q 008623 108 VIGMTFLTVTASVSGLKPVCHGPRGE-----------------------------------ETCQVT-DAQSATFFVALY 151 (559)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~-~~~~~~~~~~~~ 151 (559)
.++.+..... +.-.|+...-+ -.|... ......+++..+
T Consensus 385 ~v~~~~~~~~-----~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~ 459 (539)
T PF03137_consen 385 IVSVILYSPL-----FFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLF 459 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHH-----HeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHH
Confidence 3333221100 00011111000 011111 122334444444
Q ss_pred HHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHH-hHHHHHHhhhhhhhcccc
Q 008623 152 LIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSI-NIGALIASSVLVWIQDNE 212 (559)
Q Consensus 152 l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~-~iG~~igp~i~~~l~~~~ 212 (559)
+..+..+..........-+..|+++ |+-+.|+..... -+|.+-||++.|++.|..
T Consensus 460 ~~~~~~~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 460 ILSFFTFMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------------------------------------
T ss_pred HHHHHHHhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 4444444444444455668888887 999999976655 568888999999998863
No 263
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.40 E-value=2.8 Score=45.11 Aligned_cols=162 Identities=12% Similarity=0.064 Sum_probs=96.1
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCC---hhhhHHHHHHHHH-HHHHhhhHHHHHhHhccchhHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQS---SSTASKNVLDWSG-TCYITPLIGAFLADAYLGRYWTIAIFS 104 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s---~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~ 104 (559)
++.+..+.+..+|..+.++.+. -+++.+.++ +.....+-...-. ++.+..++-+++.+++ .|.+++....
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR-----~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~ 99 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLR-----SLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHH
Confidence 4456666666666655544332 345555443 4445555555555 6777788889999998 9999998888
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCCCCCc---ccc--c-------------CcchhHHHHHHHHHHHHhccCCCc-ccc
Q 008623 105 IIYVIGMTFLTVTASVSGLKPVCHGPRGEE---TCQ--V-------------TDAQSATFFVALYLIALGTGGIKP-CVS 165 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~-------------~~~~~~~~~~~~~l~g~g~g~~~~-~~~ 165 (559)
..+...++++++.. .|. ||.. |.+ ... . ..++...+++. .-+-.....+ ..+
T Consensus 100 ~~F~~fF~LFa~Vi-~P~----~~~~-hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~---aELWgslV~S~lFw 170 (509)
T COG3202 100 GFFLGFFALFAFVI-YPY----KDIL-HPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIM---AELWGSLVLSLLFW 170 (509)
T ss_pred HHHHHHHHHHHHHH-hcc----cccc-CCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHH---HHHHHHHHHHHHHH
Confidence 77777777777652 222 2211 100 000 0 00111111111 1111111111 335
Q ss_pred cccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccc
Q 008623 166 SYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDN 211 (559)
Q Consensus 166 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~ 211 (559)
....|+++.+| ..|.++.++...|++..++..+..++.++
T Consensus 171 ~faNeitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 171 QFANEITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred HHHHHhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 56678888776 78999999999999999999888888763
No 264
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.84 E-value=0.55 Score=50.26 Aligned_cols=137 Identities=9% Similarity=0.005 Sum_probs=103.3
Q ss_pred hhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC
Q 008623 49 MSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCH 128 (559)
Q Consensus 49 ~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (559)
+-..+..|+.++ |+++...|..=+...+....+..+..++.+|+ |..|+=+++.....+...+...+...|...
T Consensus 277 f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~~~v~~~~~~~~~---- 350 (432)
T PF06963_consen 277 FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLALCVVSFWAPGSP---- 350 (432)
T ss_pred CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHHHHHHHHhcCCCC----
Confidence 345678898876 99999999999999999999999999999998 999988888776655555544443333300
Q ss_pred CCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhh
Q 008623 129 GPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLV 206 (559)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~ 206 (559)
....+...++.+..+-=+|.-++--+..-++-|..|+++ |+...+..+...++.-++...++-
T Consensus 351 ---------~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 351 ---------FSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred ---------chhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 012344555555566567777778888888889999887 999999999988888887776544
No 265
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.78 E-value=0.34 Score=44.24 Aligned_cols=63 Identities=8% Similarity=0.104 Sum_probs=55.9
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 457 SIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 457 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
..+.+.+.-++.|++.+......-.++.+..+++.+++-.|++....+.+...|.++.-.+.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446677888999999999999999999999999999999999999999999988887776654
No 266
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=94.46 E-value=2.9 Score=42.33 Aligned_cols=43 Identities=12% Similarity=0.288 Sum_probs=31.5
Q ss_pred HhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008623 475 TFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIV 517 (559)
Q Consensus 475 ~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v 517 (559)
..+..+--+.+..+++.|-.++|...+..++|-.+++++.-.+
T Consensus 359 sYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 359 SYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 3344444566778888899999999988888887777665444
No 267
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.11 E-value=0.2 Score=52.59 Aligned_cols=93 Identities=12% Similarity=0.036 Sum_probs=68.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChh---hH
Q 008623 416 QRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDA---MR 492 (559)
Q Consensus 416 ~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~---~r 492 (559)
+.+.+|.++..+|.+++.+.... +...+..+...+.++.++.++|.++.-|....+..||.+++ .|
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~-----------~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~ 70 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP-----------PSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRR 70 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS-----------SSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc-----------chhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhh
Confidence 35678888888888886654321 00011234456778888999999999999999999999866 56
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 493 SLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 493 g~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
......++...++|+.++..+.+++-+
T Consensus 71 ~~~F~~fY~~in~G~~~~~~~~~~i~~ 97 (372)
T PF00854_consen 71 DSFFNWFYWGINIGSLFSPTLVPYIQQ 97 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred hhhHHHHHHHHhhhhHhhcccchhhcc
Confidence 677888899999999999999998864
No 268
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.96 E-value=0.16 Score=54.84 Aligned_cols=198 Identities=11% Similarity=0.037 Sum_probs=109.3
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHH-HHHHHHhhhH-HHHHhHhc--cchhHHHHH
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDW-SGTCYITPLI-GAFLADAY--LGRYWTIAI 102 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~-~~~~~~~~~~-~G~laDr~--~Grr~~~~~ 102 (559)
-.|+..+.+++..+..+..+..+....+......++++..++....+.. .+.+.+..++ .....-|. ..+|+.+..
T Consensus 259 ~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~ 338 (488)
T KOG2325|consen 259 LDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKRRIILL 338 (488)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeee
Confidence 3456667777777777777777666666666667777776665554433 2222222222 22222232 033555555
Q ss_pred HHHHHHHHHHHHhhh-hccCCCCC-------CCCCCCCCcccc-cCcchhHHHHHHH-HHHHHhccCCCcccccccccCC
Q 008623 103 FSIIYVIGMTFLTVT-ASVSGLKP-------VCHGPRGEETCQ-VTDAQSATFFVAL-YLIALGTGGIKPCVSSYGADQF 172 (559)
Q Consensus 103 ~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~ 172 (559)
++++..........- ...+.-+. .|+.. .-+-|+ .+..+.+.+++.. ++.|.+.-.+.....++.+|+.
T Consensus 339 g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~-~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiL 417 (488)
T KOG2325|consen 339 GFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFE-EYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKIL 417 (488)
T ss_pred hHHHHHHhhheeeeeccccccccccccccccCcCcc-cchhhccCcccChhhheeehhheeccccccccchHHHHHHHHh
Confidence 543333222221110 00010000 11110 001122 1222333333332 3355555555666778889999
Q ss_pred CCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 173 DDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 173 ~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
.+.+ .+.+.+.+.....++..+||++...+....|.++...+.+...++....
T Consensus 418 gp~~------q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~~~l~~~~l 470 (488)
T KOG2325|consen 418 GPRD------QGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLCLLLVVAAL 470 (488)
T ss_pred CCcc------ccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHHHHHHHHHH
Confidence 8887 7889999999999999999999998888889888777666555444433
No 269
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.82 E-value=15 Score=39.97 Aligned_cols=62 Identities=18% Similarity=0.150 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhc
Q 008623 461 QVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTSIST 522 (559)
Q Consensus 461 ~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~ 522 (559)
+++.+++..+..-..+++..++-.+++++.+-|+.|-+.|+..++|+.--..++-++.|..+
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 45677888888888889999999999999999999999999999999888877777777544
No 270
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=92.73 E-value=0.78 Score=49.36 Aligned_cols=143 Identities=17% Similarity=0.021 Sum_probs=91.6
Q ss_pred hHHHHHHHHHHHHHhhhHHHHHhHhccchh---H----HHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCc
Q 008623 68 ASKNVLDWSGTCYITPLIGAFLADAYLGRY---W----TIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTD 140 (559)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~G~laDr~~Grr---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (559)
.++..+.-.+...+..|+..++--+. +++ + -+-++.++...+++.+........ .+ +..
T Consensus 326 ~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~----------~~---~~~ 391 (498)
T COG3104 326 PAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFG----------GP---SGL 391 (498)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhc----------CC---CCC
Confidence 45666666667777777777777664 443 1 233455555555555544311010 00 122
Q ss_pred chhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhh------hccccCc
Q 008623 141 AQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVW------IQDNEGW 214 (559)
Q Consensus 141 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~------l~~~~g~ 214 (559)
.+.++++...+++++|.=++.|...++++...|+.- .+..++.+......|..++..+.+. ..+....
T Consensus 392 ~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~ 465 (498)
T COG3104 392 VSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KSFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIE 465 (498)
T ss_pred cCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HHHHHHHHHHHHHHHHHhhceecccccccchhhhhhhh
Confidence 467888899999999999999999999999999986 7888888888888888777666652 1222234
Q ss_pred hhhhHHHHHHHHHHHH
Q 008623 215 GWGFGIPAVAMAIAVV 230 (559)
Q Consensus 215 ~~~f~i~~~~~~i~~~ 230 (559)
...|...+...++..+
T Consensus 466 ~~~F~~~g~v~i~~~~ 481 (498)
T COG3104 466 GRVFGTIGVVAIVIGI 481 (498)
T ss_pred hhhHHHHHHHHHHHHH
Confidence 4456555544433333
No 271
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.05 E-value=1.2 Score=44.05 Aligned_cols=173 Identities=11% Similarity=0.035 Sum_probs=98.0
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchh--HHHHHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRY--WTIAIFSIIYVIG 110 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr--~~~~~~~~~~~~~ 110 (559)
++..+-..++...|.-++.|.|..=.++-+ .--|.+.+.+.+...++.-+..++..|- ..| ..+.+..+.....
T Consensus 252 LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~ 327 (454)
T KOG4332|consen 252 LLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAA 327 (454)
T ss_pred HHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHH
Confidence 333444455554444444444422111111 1246777777777777776666665553 222 2333333333333
Q ss_pred HHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhh
Q 008623 111 MTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWF 190 (559)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 190 (559)
..+..++.+ .+ +..+++..-+++..++-.+.|.++|.++-+=.+..|+++ |++.++++
T Consensus 328 l~Lpilt~~-vs---------------P~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfF 385 (454)
T KOG4332|consen 328 LLLPILTSS-VS---------------PSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFF 385 (454)
T ss_pred HHHHHHHhc-cC---------------CCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHH------Hhhhhhhe
Confidence 322222211 11 223455555777778888999999999999999999987 99999999
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAIAVVS 231 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i~~~~ 231 (559)
..-.|+-..++-...--=....+-+..|.++.+.+.++.+.
T Consensus 386 RvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~ 426 (454)
T KOG4332|consen 386 RVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASIL 426 (454)
T ss_pred echhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHH
Confidence 99888876554322100011234556777777666655443
No 272
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=89.76 E-value=3.1 Score=44.41 Aligned_cols=168 Identities=13% Similarity=0.083 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhhhccccccCCCCCccceeCccccccccceeeehhhhhhhhhhhhhhhhccCCC
Q 008623 330 KAIVRLLPIWATGIIFSAVYSQMSSLFVLQGERMDTHVGNSSFKIPPASLSIFDTLSVIFWVPIYDRFIVPVTRKFTGHK 409 (559)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~il~~~l~~~~~~~~~~r~~~~~ 409 (559)
++++....+.+.....|+...++.+.+..+ ....+. -.+......++..++.+|+.+...++..-|++||+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk--------~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR 102 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHK--------WSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRR 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcc--------cccccccccccccceeccccccccccccccccccc
Confidence 445555555666666777766665554432 111211 11234456788899999999997777666666541
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCCh
Q 008623 410 NGLTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPD 489 (559)
Q Consensus 410 ~~~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~ 489 (559)
.-+.++....++++.++++....... -.+|+..+ .-+......++++-+.-++.....-+.-++..+.+-+
T Consensus 103 ------PfI~~~s~~i~~~l~Lig~aaDig~~-lgd~~~~~--~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~ 173 (498)
T KOG0637|consen 103 ------PFILAGSLLIAVSLFLIGYAADIGLL-LGDNERKP--VKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARG 173 (498)
T ss_pred ------chHHHhhHHHHHHHhhhhhHhhhhHH-hcCCcccc--cchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccC
Confidence 24556667777777766654322111 11111100 1124444556677777777767777778888888877
Q ss_pred hhHHH-HHHHHHHHHHHHHHHhhHHHH
Q 008623 490 AMRSL-CSALSLTTVALGNYLSSLLVT 515 (559)
Q Consensus 490 ~~rg~-~~g~~~~~~~lg~~lg~~l~~ 515 (559)
+.+-+ +.+.+...-++|+.+|=.+.+
T Consensus 174 d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 174 DAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hhhhhccchhHHHHHHhcceeeeeccc
Confidence 77777 999999999999988877665
No 273
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=89.37 E-value=0.98 Score=47.76 Aligned_cols=61 Identities=15% Similarity=0.068 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhh
Q 008623 142 QSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWI 208 (559)
Q Consensus 142 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l 208 (559)
+.+.+++..+..|+..|....+....+.|..|+++ |...++...++-++|..++.+++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46777777778899999999999888998888776 89999998888899988888766544
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=89.27 E-value=4.7 Score=41.25 Aligned_cols=74 Identities=14% Similarity=0.146 Sum_probs=48.2
Q ss_pred HHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHh
Q 008623 77 GTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQVTDAQSATFFVALYLIALG 156 (559)
Q Consensus 77 ~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g 156 (559)
.......++.+.+..++ |-|+++.++........... .- +.+..++.+-...|+|
T Consensus 69 ~~l~~s~m~~~~~Ir~~-g~K~tm~lav~~Y~lyiA~N----l~--------------------pr~~tlVPa~~~~G~a 123 (390)
T KOG3097|consen 69 LSLIDSSMFMPLLIRFL-GTKWTMVLAVFPYALYIAAN----LE--------------------PRYETLVPAGLVLGMA 123 (390)
T ss_pred HHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHhh----cc--------------------hhHHhhccHHHhhccc
Confidence 33444455555777776 99999988765443322111 11 2244566677788999
Q ss_pred ccCCCcccccccccCCCCc
Q 008623 157 TGGIKPCVSSYGADQFDDA 175 (559)
Q Consensus 157 ~g~~~~~~~~~~~~~~~~~ 175 (559)
.+.++.+-.+|+++.-...
T Consensus 124 a~p~W~SkgtYlT~~g~~y 142 (390)
T KOG3097|consen 124 AGPIWASKGTYLTPMGQNY 142 (390)
T ss_pred cccccccCcceecHHHHHH
Confidence 9999999999888876543
No 275
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=87.13 E-value=6.1 Score=42.60 Aligned_cols=113 Identities=18% Similarity=0.175 Sum_probs=70.1
Q ss_pred HHHHHHHhhhHHHHHhH---hccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCccccc--CcchhHHHHHH
Q 008623 75 WSGTCYITPLIGAFLAD---AYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQV--TDAQSATFFVA 149 (559)
Q Consensus 75 ~~~~~~~~~~~~G~laD---r~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 149 (559)
...+..++..+.+.+.+ ++ ||++++..+.++..++.++.-+. .|.- -+-++|+... ..++....++.
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~f-g~~~~~~~~~~~~~~~~~li~l~--~p~d-----ap~~~t~~~~~~~~~~~~~~~ii 359 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGF-GRKPTVLIGIIIHLIGFLLIHLS--FPND-----APLRPTDSPPLLFTPSYYLALII 359 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhc-ccCcchhHHHHHHHHHHHHHhcc--cccc-----CCCCCCcccccccccchhHHHHH
Confidence 34444455555555654 45 89999999988777666665443 2320 0011222221 11234445555
Q ss_pred HHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHh
Q 008623 150 LYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIAS 202 (559)
Q Consensus 150 ~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp 202 (559)
-++.|++.+......+.++++..|++ |..+++++-.-..++..++-
T Consensus 360 ~~l~G~~D~~~~t~~~~ii~~~~~~~-------~~~~fsi~kfyq~~~s~v~~ 405 (461)
T KOG3098|consen 360 GFLLGFGDACFNTQRYVIIALLYPDD-------RAQAFSLFKFYQSVASCVAF 405 (461)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHhcCc-------hHHHHHHHHHHHHHHHHHHh
Confidence 67899999999999999999999665 78888876666556555443
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=86.48 E-value=25 Score=38.38 Aligned_cols=163 Identities=12% Similarity=0.071 Sum_probs=86.9
Q ss_pred ccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcC---CChhhhHHHHHHHHH-HHHHhhhHHHHHhHhccchhHHHHHHH
Q 008623 29 WKACPFILGNECCERLAYYGMSTNLVRYFKHQLD---QSSSTASKNVLDWSG-TCYITPLIGAFLADAYLGRYWTIAIFS 104 (559)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~~~~~~~~~~-~~~~~~~~~G~laDr~~Grr~~~~~~~ 104 (559)
++.++.+.+..+|..+.+..+ .-+++.+= .++.....+-....+ +..+...+-.+++|++ +|.+++....
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~l-----R~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~ 96 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTIL-----RDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIII 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-----HHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHH
Confidence 345666666666665544322 23344332 233333333332222 3445566678999998 9999888776
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCCCCCCcccc---c------------CcchhHHHHHHHHHHHHhccCCCc-cccccc
Q 008623 105 IIYVIGMTFLTVTASVSGLKPVCHGPRGEETCQ---V------------TDAQSATFFVALYLIALGTGGIKP-CVSSYG 168 (559)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~~~~~~~l~g~g~g~~~~-~~~~~~ 168 (559)
+.+...+.+.++.. .|.- +..|- ++.... . .++....+++.- -+-.....+ ..+++.
T Consensus 97 ~~F~~fF~~f~~vl-yP~~-~~lhp--~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~a---ElwgsvvlSlLFW~fA 169 (491)
T PF03219_consen 97 IPFLGFFALFAFVL-YPNR-DILHP--DAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMA---ELWGSVVLSLLFWGFA 169 (491)
T ss_pred HHHHHHHHHHHHHH-hhch-hhcCC--CHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Confidence 66555555555431 2320 00000 000000 0 000111111111 111111112 347788
Q ss_pred ccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhcc
Q 008623 169 ADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQD 210 (559)
Q Consensus 169 ~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~ 210 (559)
.|.++.+| ..|.++.+..+.|+|.+++..+..++.+
T Consensus 170 N~itt~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 170 NEITTVEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89998887 7889999999999999999888887766
No 277
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=86.08 E-value=0.59 Score=50.25 Aligned_cols=159 Identities=11% Similarity=-0.047 Sum_probs=84.3
Q ss_pred hhcC---CChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCCCCCCcc
Q 008623 59 HQLD---QSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVCHGPRGEET 135 (559)
Q Consensus 59 ~~lg---~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (559)
+.++ +++...+.+..+..++..++..+....--+. .-|+++....++.++..+.-.+.- ......-|.
T Consensus 245 ~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~-~~R~~~~~t~~~~~~~~l~~~~lv--~~~n~~~Gi------ 315 (433)
T PF03092_consen 245 DALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNW-SWRRIFVVTTLVSVLASLFDLLLV--TRWNLDLGI------ 315 (433)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CHHHHHHHHHHHHHHHhcccEEEE--EEEeeeeCc------
Confidence 3455 7877777777666666666665554443333 556777666655554443322110 000000000
Q ss_pred cccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccC--
Q 008623 136 CQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEG-- 213 (559)
Q Consensus 136 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g-- 213 (559)
.+. +..+..-++..+..+...-....+.+|+.|+.. -++.+++.....|+|..++..++..+.+..+
T Consensus 316 ---~d~--~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~------Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt 384 (433)
T PF03092_consen 316 ---PDQ--WFALGDTILEEVIGMIAFMPSLVLAARLCPKGS------EGTVYALLASFSNLGSSVSSTLGAFLMELFGVT 384 (433)
T ss_pred ---CCe--EEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCc------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 001 111111122233333333344567889999987 5888999888889988888888877765443
Q ss_pred ------chhhhHHHHHHHHHHHHHHHhccc
Q 008623 214 ------WGWGFGIPAVAMAIAVVSFFSGTR 237 (559)
Q Consensus 214 ------~~~~f~i~~~~~~i~~~~~~~~~~ 237 (559)
-.+..++..+..++.+....+..+
T Consensus 385 ~~~f~~l~~lili~~~~~ll~l~ll~lLp~ 414 (433)
T PF03092_consen 385 RDDFSNLWLLILICSVIQLLPLPLLFLLPP 414 (433)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 223344444444555554444443
No 278
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.64 E-value=56 Score=35.17 Aligned_cols=61 Identities=15% Similarity=0.122 Sum_probs=50.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 008623 457 SIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIV 517 (559)
Q Consensus 457 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v 517 (559)
+.++..+..++.|+..|........+..+.++++.|..+-.+...+-.+|-.+|+.+.-.+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455666679999999999988888899999999999999999999999988888775444
No 279
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=85.30 E-value=1.8 Score=46.62 Aligned_cols=57 Identities=12% Similarity=0.210 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhh
Q 008623 142 QSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSV 204 (559)
Q Consensus 142 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i 204 (559)
+.+..++..+++|+..|........+..+..++++ |..+..+...+..+|-.+|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666888999999988888888888887665 6667667777777777777654
No 280
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=83.59 E-value=3 Score=41.27 Aligned_cols=93 Identities=11% Similarity=0.024 Sum_probs=66.2
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhh
Q 008623 412 LTQLQRMGIGLFISILSMIAAAVLELIRLRMVREHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAM 491 (559)
Q Consensus 412 ~~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~ 491 (559)
.+++..+.+|.+...+|+.++...-.++ ....+.|.+.+...+.+.+....+........+.+|+ .
T Consensus 63 ~gp~~~l~iG~~~~~~GY~~~~l~~~~~-------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~ 128 (250)
T PF06813_consen 63 FGPWVVLLIGAVLGFVGYGLLWLAVSGR-------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S 128 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCc-------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c
Confidence 4566678899999999998877653221 1113455555555666667667766767777799986 6
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 008623 492 RSLCSALSLTTVALGNYLSSLLVTIVT 518 (559)
Q Consensus 492 rg~~~g~~~~~~~lg~~lg~~l~~~v~ 518 (559)
||++.|+.-...++++.+-+.+...+.
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 999999999999999877766665554
No 281
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=80.54 E-value=13 Score=36.94 Aligned_cols=59 Identities=19% Similarity=0.337 Sum_probs=38.9
Q ss_pred ccccchhhhhHHHhHHHHHHhhhhhhh---cc--ccCchhhhHHHHHHHHHHHHHHHhcccccc
Q 008623 182 HKSSFFNWFYFSINIGALIASSVLVWI---QD--NEGWGWGFGIPAVAMAIAVVSFFSGTRLFR 240 (559)
Q Consensus 182 ~r~~~~~~~~~~~~iG~~igp~i~~~l---~~--~~g~~~~f~i~~~~~~i~~~~~~~~~~~~~ 240 (559)
+|+....+..++.++|+.+.-+....- .+ ...|++.+.+.+++.++.++++.+..++..
T Consensus 3 ~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd 66 (267)
T PF07672_consen 3 KKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFD 66 (267)
T ss_pred ccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 367777777788899988875432211 11 124999988888877777777766655543
No 282
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=78.60 E-value=21 Score=34.38 Aligned_cols=63 Identities=21% Similarity=0.147 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhHHHhhhcCCh-hhHHHHHHHHHH-HHHHHHHHhhHHHHHhhhh
Q 008623 458 IMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPD-AMRSLCSALSLT-TVALGNYLSSLLVTIVTSI 520 (559)
Q Consensus 458 ~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~-~~rg~~~g~~~~-~~~lg~~lg~~l~~~v~~~ 520 (559)
.+.+.+...+.+++.+...|....++.+..|+ +.|+...+.... ...+|..+++.+.+.+...
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555565668888888999999999999998 678999999888 6888888888777766543
No 283
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=75.00 E-value=1.2e+02 Score=32.23 Aligned_cols=58 Identities=19% Similarity=0.131 Sum_probs=45.5
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHH
Q 008623 457 SIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLV 514 (559)
Q Consensus 457 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~ 514 (559)
+-++.+....+.|+..|-.......++.+..|++.+-.+-.+...+...|-.+|+++.
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 4567777778899988888888888999999988888877777777777766666543
No 284
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=72.52 E-value=1.3e+02 Score=31.68 Aligned_cols=73 Identities=12% Similarity=-0.036 Sum_probs=50.8
Q ss_pred hhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 33 PFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
+.+....+..+.+-=+.......|+.+-.|-|...++..-.+-+....+..++-|-..|+. .|+|++...+.+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~-sr~Kvi~~~L~l 102 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGM-SRVKVIQTWLLL 102 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcch-hHHHHHHHHHhh
Confidence 4455555555555555555566777765565555566666666777788888889999998 999999887654
No 285
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=69.20 E-value=1.3 Score=45.39 Aligned_cols=57 Identities=16% Similarity=0.280 Sum_probs=3.7
Q ss_pred hhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhh
Q 008623 142 QSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSV 204 (559)
Q Consensus 142 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i 204 (559)
+.+..++..+++|+..|-.......+..+..++++ |..+-.+...+..+|-.+|..+
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --------------------HHHH---------------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667788999999999999999999988665 6666666666667777666644
No 286
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=68.75 E-value=99 Score=33.67 Aligned_cols=70 Identities=13% Similarity=0.080 Sum_probs=50.1
Q ss_pred HHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHHH
Q 008623 153 IALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMAI 227 (559)
Q Consensus 153 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~i 227 (559)
.++.........-..+.+.+|+.+ +|+..++-++...++..++..++.+.+.+..||.....+.-+++++
T Consensus 276 y~~~~nlve~~~k~~v~~~~p~~~-----~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~li 345 (472)
T TIGR00769 276 YGISINLVEVTWKSKLKAQYPSPN-----EYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 444445555555667788887654 4899999988888888877777778999999999765554444433
No 287
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=60.36 E-value=16 Score=36.20 Aligned_cols=71 Identities=17% Similarity=0.057 Sum_probs=54.7
Q ss_pred CCccchhhHhhHHHHHHHHHHhhhhhHHHHHhhhcCCChhhhHHHHHHHHHHHHHhhhHHHHH---------hHhccchh
Q 008623 27 GTWKACPFILGNECCERLAYYGMSTNLVRYFKHQLDQSSSTASKNVLDWSGTCYITPLIGAFL---------ADAYLGRY 97 (559)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~~~~~~~~~~~~~~~~~~~G~l---------aDr~~Grr 97 (559)
+.++.+ .--..++.+.....+.++++..|++ +.|.++...+.+.....+.-.+..|+.|.. .||+ |||
T Consensus 15 gr~svf-~yGvGHmlNDitAScWFTYlllflt-qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~ 91 (412)
T KOG4830|consen 15 GRTSVF-AYGVGHMLNDITASCWFTYLLLFLT-QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRR 91 (412)
T ss_pred cceeee-eechhHHHhhHHHHHHHHHHHHHHH-HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cce
Confidence 444433 3346788888988888999999986 567888888888888899999998888643 6788 988
Q ss_pred HHH
Q 008623 98 WTI 100 (559)
Q Consensus 98 ~~~ 100 (559)
+..
T Consensus 92 ~~w 94 (412)
T KOG4830|consen 92 MSW 94 (412)
T ss_pred eee
Confidence 754
No 288
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=58.65 E-value=18 Score=40.37 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=84.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------hcCCCCCCCccchhHHHHHHHHHHHHHHHHHhhhhHHHhhhc
Q 008623 413 TQLQRMGIGLFISILSMIAAAVLELIRLRMVR------EHNYYDLPEMPMSIMWQVPQYFLIGCAEVFTFIGQLEFFYEQ 486 (559)
Q Consensus 413 ~~~~~~~~G~~~~~i~~l~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~ 486 (559)
++.+.+.++.++..++..++...... ....+ .++..|...+......+...+-+.++|.++.-|...++-.++
T Consensus 102 gry~tI~~~s~i~~~G~~~lt~~a~~-~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQ 180 (571)
T KOG1237|consen 102 GRYFTINIGSLISLLGLFGLTLSAMI-PALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQ 180 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccc
Confidence 44456777888877776665554332 11111 122223333333344555677778889999999999999999
Q ss_pred CC---h-h--hHHHHHHHHHHHHHHHHHHhhHHHHHhhhhhccCCCCCC-CCCCCCCchhhHHhhhhh--heeeeCCCCC
Q 008623 487 AP---D-A--MRSLCSALSLTTVALGNYLSSLLVTIVTSISTKNGNLGW-IPDNLNRGHLHYFFWLLT--WYTYKRPVGS 557 (559)
Q Consensus 487 ~P---~-~--~rg~~~g~~~~~~~lg~~lg~~l~~~v~~~~~~~~~~~w-~~~~~~~~~~~~~f~~~~--~~~~~~~~~~ 557 (559)
.| + + .+...+..++...++|..++..+..++-+..+ +.++. +|+.+|-- ....|+.. .|.|+++.|+
T Consensus 181 fd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~--w~lgf~i~~~~~~l--ai~iF~~g~~~y~~~~p~gs 256 (571)
T KOG1237|consen 181 FDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVG--WKLGFGIPTVLNAL--AILIFLPGFPFYRYKKPRGS 256 (571)
T ss_pred cCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhccc--ceeeccHHHHHHHH--HHHHHHcCceeEEeeCCCCC
Confidence 98 2 2 22367778888999999888887777632211 22222 55555542 22333333 7777777765
No 289
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=53.17 E-value=96 Score=32.42 Aligned_cols=156 Identities=12% Similarity=0.046 Sum_probs=83.7
Q ss_pred hhhHHHHHh-hhcCCChhhhH-HHHHHHHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccCCCCCCC
Q 008623 50 STNLVRYFK-HQLDQSSSTAS-KNVLDWSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVSGLKPVC 127 (559)
Q Consensus 50 ~~~l~~yl~-~~lg~s~~~~~-~~~~~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (559)
-+++..|+. .+.+++..+.. -+.-...-...+.-.+.=.+.|-. --|+++++-.+..+....++.+.
T Consensus 24 eP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~l-rYKPvivlq~ls~v~~w~~lv~g---------- 92 (433)
T KOG3810|consen 24 EPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYL-RYKPVVVLQALSGVPVWIMLVFG---------- 92 (433)
T ss_pred CCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhh-hcceeeeeeccchhHHHHHHHhc----------
Confidence 356677775 45667766543 222333333333333344578876 55666665544444443333333
Q ss_pred CCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhh
Q 008623 128 HGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVW 207 (559)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~ 207 (559)
.+.+..-+.-+..|...+. ..+.++++-+..++++ +.+..+....+.-.|-..|..++-.
T Consensus 93 -------------~sV~~mQvlE~FyG~~tAa-EIAYysYIYs~Vd~~~------Yqrvt~y~RaA~L~g~~~g~vlaQl 152 (433)
T KOG3810|consen 93 -------------PSVKAMQVLEFFYGPATAA-EIAYYSYIYSKVDPEM------YKRVTGYCRAAFLVGKFVGSVLAQL 152 (433)
T ss_pred -------------CCchheeeehhhcChHHHH-HHhhhheeeeecCHHH------HHHHHHHhHHHHHHHhHHHhHHHHH
Confidence 2233344444444443332 2445666666666665 7788888777777777777766655
Q ss_pred hccc--cCchhhhHHHHHHHHHHHHHHHhcc
Q 008623 208 IQDN--EGWGWGFGIPAVAMAIAVVSFFSGT 236 (559)
Q Consensus 208 l~~~--~g~~~~f~i~~~~~~i~~~~~~~~~ 236 (559)
+... .++...=.++.....++....++.+
T Consensus 153 Lvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP 183 (433)
T KOG3810|consen 153 LVSLETLSYTTLNYISLAEVTIAVLLALFLP 183 (433)
T ss_pred HhhhcccchhhhchhhHHHHHHHHHHHhhCC
Confidence 5432 3344444455555556665555544
No 290
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=51.61 E-value=27 Score=36.98 Aligned_cols=114 Identities=11% Similarity=0.097 Sum_probs=64.4
Q ss_pred HHhhhhhHHHHHhhhcCCCh---hhhHHHHHH-HHHHHHHhhhHHHHHhHhccchhHHHHHHHHHHHHHHHHHhhhhccC
Q 008623 46 YYGMSTNLVRYFKHQLDQSS---STASKNVLD-WSGTCYITPLIGAFLADAYLGRYWTIAIFSIIYVIGMTFLTVTASVS 121 (559)
Q Consensus 46 ~~~~~~~l~~yl~~~lg~s~---~~~~~~~~~-~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~~~~~~~~~~~~~~~~ 121 (559)
|..-....|.+..+..+-.. .-.-..... +.+.-.++.+...++-++ +||+..+.. ++-.+...++.++.-.|
T Consensus 259 y~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i~v-~lR~lfiPlF~~cn~~~ 335 (406)
T KOG1479|consen 259 YFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTIPV-LLRLLFIPLFLLCNYPP 335 (406)
T ss_pred eeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehHHH-HHHHHHHHHHHHhccCC
Confidence 33334567777766543222 222233334 677777777777777554 344444333 33333333333221111
Q ss_pred CCCCCCCCCCCCcccccCcchhHHHHHHHHHHHHhccCCCcccccccccCCCCcc
Q 008623 122 GLKPVCHGPRGEETCQVTDAQSATFFVALYLIALGTGGIKPCVSSYGADQFDDAD 176 (559)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 176 (559)
. + ..-++.+.++....++|+..|-..+....+..+..|+++
T Consensus 336 ~-----------~---v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e 376 (406)
T KOG1479|consen 336 L-----------P---VVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE 376 (406)
T ss_pred C-----------C---ceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH
Confidence 0 0 111345566677788999999999999999999988876
No 291
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=48.34 E-value=1.8e+02 Score=31.07 Aligned_cols=62 Identities=18% Similarity=0.274 Sum_probs=49.8
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 457 SIMWQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 457 ~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
+..++-+.-++.|++... -...+++++..+|+++=-++.+....+.-+|..++++++..+..
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666667888886544 56889999999999999999988888888888888887776654
No 292
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.15 E-value=59 Score=27.51 Aligned_cols=32 Identities=13% Similarity=-0.096 Sum_probs=22.5
Q ss_pred HHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 75 WSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 75 ~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
=.+...+.....||+-|||.|-++--++.+++
T Consensus 51 efIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 51 EFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 34455555667799999999988866665544
No 293
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=41.69 E-value=99 Score=22.47 Aligned_cols=33 Identities=6% Similarity=0.095 Sum_probs=22.1
Q ss_pred HHHHHHHHhhhHHHHHhHhccchhHHHHHHHHH
Q 008623 74 DWSGTCYITPLIGAFLADAYLGRYWTIAIFSII 106 (559)
Q Consensus 74 ~~~~~~~~~~~~~G~laDr~~Grr~~~~~~~~~ 106 (559)
.......+.....|+..|+.++.++..++..++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~l 40 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLL 40 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 344455666778899999988986655554443
No 294
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=36.89 E-value=3.7e+02 Score=25.37 Aligned_cols=33 Identities=21% Similarity=0.472 Sum_probs=16.6
Q ss_pred hHHHhHHHHHHhhhhhhhccccCchhhhHHHHHH
Q 008623 191 YFSINIGALIASSVLVWIQDNEGWGWGFGIPAVA 224 (559)
Q Consensus 191 ~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~ 224 (559)
+...-++..+|..+++.+.+..+. ++++++++.
T Consensus 168 ~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~~ 200 (209)
T PF06912_consen 168 YLLIILSFFIGAILGALLYRRLGF-WALLLPALL 200 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHH
Confidence 334444555555555666666663 344444433
No 295
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=32.78 E-value=6.9e+02 Score=27.36 Aligned_cols=69 Identities=16% Similarity=0.130 Sum_probs=47.1
Q ss_pred HHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccCchhhhHHHHHHHH
Q 008623 153 IALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEGWGWGFGIPAVAMA 226 (559)
Q Consensus 153 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g~~~~f~i~~~~~~ 226 (559)
.++..-.....--..+.+.+|+.+ .+...+|-++...++-..+-..+++.+.+..||...-.+.-++++
T Consensus 292 Ygi~inLvE~~wK~~lk~~~~~~~-----~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~l 360 (491)
T PF03219_consen 292 YGISINLVEVVWKSQLKQLYPDPN-----DYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVIL 360 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHH
Confidence 445555555555666778887664 377788877777777776667778888999999976555433333
No 296
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=28.07 E-value=3e+02 Score=27.40 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHHHhccCCCcccccccccC
Q 008623 142 QSATFFVALYLIALGTGGIKPCVSSYGADQ 171 (559)
Q Consensus 142 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~ 171 (559)
....+++.-++.|++.-++.++...+--|.
T Consensus 203 ~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEy 232 (267)
T PF07672_consen 203 GFAFFYIFGFLAGFFLWGIQGVILNLPHEY 232 (267)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHhcChhhh
Confidence 455677777788877777766654443333
No 297
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=25.47 E-value=1.3e+02 Score=27.24 Aligned_cols=48 Identities=25% Similarity=0.403 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHH
Q 008623 144 ATFFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALI 200 (559)
Q Consensus 144 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~i 200 (559)
..+....+++|+|.-+ ..+..++...+++. -|+.+|+-.+-.|++-+.
T Consensus 98 ~~~~~S~~~Fg~gllG---isYGilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 98 AVLLVSLVFFGLGLLG---ISYGILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHHHh---hhhhhcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 3344444445544443 23444555555554 699999999988887654
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=25.10 E-value=3.6e+02 Score=29.67 Aligned_cols=62 Identities=13% Similarity=0.200 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhccCCCcccccccccCCCCcchHhhhccccchhhhhHHHhHHHHHHhhhhhhhccccC
Q 008623 146 FFVALYLIALGTGGIKPCVSSYGADQFDDADEAEKKHKSSFFNWFYFSINIGALIASSVLVWIQDNEG 213 (559)
Q Consensus 146 ~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~iG~~igp~i~~~l~~~~g 213 (559)
+++.-++..+..-..+.++++.-+++.++.- -|+.+.+.|...|+|+---..+.-++.|...
T Consensus 408 vI~~~~l~sf~stvmFVai~AFharISDP~I------GGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 408 VIIQHVLSSFMSTVMFVAIMAFHARISDPAI------GGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCccc------chHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 3333445556666777888899999999887 7899999999999987666555555555543
No 299
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=21.92 E-value=2e+02 Score=26.14 Aligned_cols=47 Identities=4% Similarity=-0.125 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHH
Q 008623 460 WQVPQYFLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYL 509 (559)
Q Consensus 460 ~~~~~~~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~l 509 (559)
.++...+++++|.. -..|.+.+..-+++..|...|+-.+-.+++-..
T Consensus 99 ~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 99 VLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 34445555666533 345777788888888999999999888887543
No 300
>PRK03612 spermidine synthase; Provisional
Probab=20.66 E-value=4.8e+02 Score=28.80 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhhhhHHHhhhcCChhhHHHHHHHHHHHHHHHHHHhhHHHHHhhh
Q 008623 466 FLIGCAEVFTFIGQLEFFYEQAPDAMRSLCSALSLTTVALGNYLSSLLVTIVTS 519 (559)
Q Consensus 466 ~l~~~~~~~~~p~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~v~~ 519 (559)
++.++..+...|....+..+... +.-|...|-.+..+.+|+++|+++.+.+.-
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 44556666666765555544322 224667788888888999999999988774
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.60 E-value=3.1e+02 Score=22.99 Aligned_cols=26 Identities=4% Similarity=-0.086 Sum_probs=15.0
Q ss_pred HHHHhhhHHHHHhHhccchhHHHHHH
Q 008623 78 TCYITPLIGAFLADAYLGRYWTIAIF 103 (559)
Q Consensus 78 ~~~~~~~~~G~laDr~~Grr~~~~~~ 103 (559)
...+...+.|..-|+.+|-.+.+.+.
T Consensus 54 ~pil~G~~lG~WLD~~~~t~~~~tl~ 79 (100)
T TIGR02230 54 IPTLLGVAVGIWLDRHYPSPFSWTLT 79 (100)
T ss_pred HHHHHHHHHHHHHHhhcCCCcHHHHH
Confidence 33444556677778876765544333
Done!